BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023576
(280 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224121196|ref|XP_002330767.1| predicted protein [Populus trichocarpa]
gi|222872569|gb|EEF09700.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 176/286 (61%), Positives = 225/286 (78%), Gaps = 16/286 (5%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQ---------GLVPVTVKMIS 51
MFSSSQFDA++AFSGGGFMPSQ Q D S A++ G+VPVTVK IS
Sbjct: 1 MFSSSQFDATSAFSGGGFMPSQSTQLTDSTPSPAKASLLSLSLSSRNSLGVVPVTVKQIS 60
Query: 52 EASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD 111
+AS SGD+KS+F+ING+++TNVT+VG+V+NK E+++DV+F +DDGTGR+ C+RW +E FD
Sbjct: 61 QASQSGDEKSSFVINGVDVTNVTVVGMVFNKAEKSTDVSFVIDDGTGRIGCRRWVTENFD 120
Query: 112 TREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ 171
EMEA+QDGMYVR+IG+L+ FQ KQ+VAFSVRPVTNFDE+T H+I+CI+ HLQNSK
Sbjct: 121 KLEMEAVQDGMYVRVIGHLRVFQDVKQLVAFSVRPVTNFDEITFHFIDCIHSHLQNSK-- 178
Query: 172 VQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNL-SSQFGVDGLKDCDQMILDYLQQPSS 230
+QG S+Q MV+SS+NT R G QT +NL S QF VDGLKDCDQ++LD LQQ SS
Sbjct: 179 LQGGASTQLHMVESSMNTPVRNG----QTFTSNLMSKQFDVDGLKDCDQLVLDRLQQSSS 234
Query: 231 SERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+E+G+H++EL +QLK+P +KI +SI SLE+EGLIYSTIDEFHYK
Sbjct: 235 IGQEKGMHMDELCQQLKLPMEKIKESIRSLEDEGLIYSTIDEFHYK 280
>gi|31790111|gb|AAP58374.1| RPA 32kDa [Pisum sativum]
Length = 273
Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 167/279 (59%), Positives = 220/279 (78%), Gaps = 7/279 (2%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
MFSSSQFD+SNAFSGGGF SQ +S+ P+ +SRDSQGLVPVTVK ISEAS SGD+K
Sbjct: 1 MFSSSQFDSSNAFSGGGFTSSQLNESSPAPT---KSRDSQGLVPVTVKQISEASQSGDEK 57
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD 120
SNF ING+++TNVTLVG+VY K ER +DVNF LDDGTGR+ C+RW +E FD++EME + +
Sbjct: 58 SNFAINGVDLTNVTLVGMVYEKTERNTDVNFVLDDGTGRIKCRRWVNETFDSKEMEEVSN 117
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP 180
MYVR+ GNLKSFQG KQ+ AFSVRPVTNFDE+ H+I+CI+ HL +K +++G PS+ P
Sbjct: 118 DMYVRVYGNLKSFQGVKQLGAFSVRPVTNFDEIPFHFIDCIHSHLL-AKVKLEGTPSTYP 176
Query: 181 QMVDSSLNTSARTGLSGYQTAPTNLS-SQFGVDGLKDCDQMILDYLQQPSSSERERGVHV 239
+SS+NT ++ L+G Q AP+N +Q+ DGL+DCD++++DYLQQ SS ERG+HV
Sbjct: 177 P-TNSSINTPVKSALNGSQ-APSNPGYTQYSTDGLEDCDKLVIDYLQQHSSMLDERGIHV 234
Query: 240 NELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
EL+ +LK+P +I S+ +LE++GL+YSTID+ HYK A
Sbjct: 235 EELARELKLPLDRIRLSVKALEDDGLVYSTIDDSHYKQA 273
>gi|297735401|emb|CBI17841.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/277 (57%), Positives = 207/277 (74%), Gaps = 6/277 (2%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
M+S SQFD + AFSGGGFMPSQ Q+A+ S AR+RD+Q L+P+TVK ISEA S DDK
Sbjct: 1 MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD 120
SNF+I+G+E+ NVTLVG+V+NK ER +DV F LDDGTGR+ C RW +E DT+EME I D
Sbjct: 61 SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP 180
GMYVR+ G+LK FQGK+ + FS+RPVT+F+E+ H+IECIY H+ N+KS+VQ +Q
Sbjct: 121 GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGGPTQS 180
Query: 181 QMVDSSLNTSARTGLSGYQTA-PTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHV 239
+ + ++ T L GYQ + P S Q+G GLK DQ+++DYLQQP S R++GV
Sbjct: 181 HVTNPAIGTP----LKGYQASQPNQFSGQYGA-GLKGVDQLVIDYLQQPQSLARDQGVGR 235
Query: 240 NELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+EL++QL +P KIM+SI SLE EGLIYSTIDE+HYK
Sbjct: 236 DELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYK 272
>gi|449437074|ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
sativus]
gi|449519474|ref|XP_004166760.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
sativus]
Length = 271
Score = 329 bits (843), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 166/280 (59%), Positives = 211/280 (75%), Gaps = 12/280 (4%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
MFSS+QFD S GF SQ S S+A+SR+S GL+PVTVK ISEASHSG++K
Sbjct: 1 MFSSTQFD-----SASGFTSSQTNDS-----SSAKSRESPGLIPVTVKQISEASHSGEEK 50
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD 120
+NF+ING++ITNVT+VG V K ER +D+ FT+DDGTG + CKRW ++ FDT +ME IQD
Sbjct: 51 ANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQD 110
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ-VQGFPSSQ 179
GMYVR+ G+LK FQ KQI AFSVRPVTNFDE+T H+IECI+ HL+NSK Q ++G S+Q
Sbjct: 111 GMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLKGNGSTQ 170
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNL-SSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
Q DS + T + G +GY T + + S Q VD K CD+++LDYLQ PSS +ERG+H
Sbjct: 171 LQTSDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIH 230
Query: 239 VNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+ELS+QLK+P +KI+DSI SLE+EGLIYSTIDEFH+K A
Sbjct: 231 KDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSA 270
>gi|359485014|ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
Length = 275
Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 158/277 (57%), Positives = 206/277 (74%), Gaps = 8/277 (2%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
M+S SQFD + AFSGGGFMPSQ Q+A+ S AR+RD+Q L+P+TVK ISEA S DDK
Sbjct: 1 MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD 120
SNF+I+G+E+ NVTLVG+V+NK ER +DV F LDDGTGR+ C RW +E DT+EME I D
Sbjct: 61 SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP 180
GMYVR+ G+LK FQGK+ + FS+RPVT+F+E+ H+IECIY H+ N+KS+ G +Q
Sbjct: 121 GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRAGG--PTQS 178
Query: 181 QMVDSSLNTSARTGLSGYQTA-PTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHV 239
+ + ++ T L GYQ + P S Q+G GLK DQ+++DYLQQP S R++GV
Sbjct: 179 HVTNPAIGTP----LKGYQASQPNQFSGQYGA-GLKGVDQLVIDYLQQPQSLARDQGVGR 233
Query: 240 NELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+EL++QL +P KIM+SI SLE EGLIYSTIDE+HYK
Sbjct: 234 DELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYK 270
>gi|225429793|ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
gi|296081770|emb|CBI20775.3| unnamed protein product [Vitis vinifera]
Length = 268
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/245 (62%), Positives = 199/245 (81%), Gaps = 7/245 (2%)
Query: 32 STARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNF 91
S+A+SR++QGL+PVTVK ISEASHSGDDKSNF I+G+++TN+TLVG+V++K ER +DV+F
Sbjct: 26 SSAKSRETQGLIPVTVKQISEASHSGDDKSNFQIDGVDVTNITLVGMVFDKSERVTDVSF 85
Query: 92 TLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFD 151
LDDGTGR+ CKRW +E FDTREME I DG+YVRL G+L+S G +Q+VAFSVRPVTNFD
Sbjct: 86 ALDDGTGRIECKRWVNEAFDTREMENISDGIYVRLNGHLRSSGGNRQLVAFSVRPVTNFD 145
Query: 152 EVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGV 211
E+ H+IE I+ HL+NSK+++ +QP L+ S +T +GYQT + LS+Q V
Sbjct: 146 EIAFHFIEVIHLHLKNSKTRLPSDALTQP------LSASVKTESTGYQTPSSQLSAQ-SV 198
Query: 212 DGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTID 271
DG+K DQM+LDYLQQPS+ +RE+G+H +ELS+QLKI +KIM+SI +LE EGLIYSTID
Sbjct: 199 DGVKGLDQMVLDYLQQPSNYDREKGIHRDELSQQLKISTEKIMESIRTLEEEGLIYSTID 258
Query: 272 EFHYK 276
EFHYK
Sbjct: 259 EFHYK 263
>gi|356563809|ref|XP_003550151.1| PREDICTED: replication protein A 32 kDa subunit-like [Glycine max]
Length = 277
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/279 (56%), Positives = 212/279 (75%), Gaps = 3/279 (1%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
MFS SQFDA+ AFSGGGFM SQP D + ++SR++QGLVPVTVK ISEAS SGD+K
Sbjct: 1 MFSGSQFDATTAFSGGGFMSSQPSTLNDSSPAPSKSRETQGLVPVTVKQISEASQSGDEK 60
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD 120
SNF+ING+++ NVTL+G+V+ K ER +DVNF LDDGTGR+ C+RW +E FDT+EMEA+ +
Sbjct: 61 SNFVINGVDLNNVTLLGMVFEKVERNTDVNFVLDDGTGRIKCRRWVNEAFDTKEMEAVMN 120
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP 180
GMYVR+ G+LKSFQG KQ+V FS RPVTNFDE+ H+I+CI+ HL+ SK +++G +S
Sbjct: 121 GMYVRVYGHLKSFQGVKQLVTFSARPVTNFDEIPFHFIDCIHNHLR-SKIKMEGI-TSSN 178
Query: 181 QMVDSSLNTSARTGLSGYQTAPTN-LSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHV 239
SSLNT ++ +G Q +N +S+Q VDGLK D++I+DYL+Q S RG+HV
Sbjct: 179 PSSGSSLNTPGKSAPNGSQAPSSNPVSAQHSVDGLKGIDKLIMDYLEQHSDMSDGRGIHV 238
Query: 240 NELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+ELS +LK+P +KI S+ +L ++G IYSTID+ HYK A
Sbjct: 239 DELSRELKLPMEKIKLSLKTLADDGEIYSTIDDDHYKKA 277
>gi|255574103|ref|XP_002527967.1| Replication protein A 30 kDa subunit, putative [Ricinus communis]
gi|223532593|gb|EEF34379.1| Replication protein A 30 kDa subunit, putative [Ricinus communis]
Length = 242
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/262 (58%), Positives = 194/262 (74%), Gaps = 33/262 (12%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGGFM SQ Q D S A+SRDSQGLVPVTVK IS+ASHSGD+ SN++I+G+++TNVT
Sbjct: 12 GGGFMSSQSSQPTDSAPSPAKSRDSQGLVPVTVKQISQASHSGDENSNYVIDGVDVTNVT 71
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQ 134
+VG+V++K ++ +DVNFT+DDGTGR+ CKRW +E FD+ EME IQDGMYVR+ G+L+SFQ
Sbjct: 72 VVGMVFDKAQKVTDVNFTVDDGTGRIGCKRWVNENFDSSEMETIQDGMYVRVSGHLRSFQ 131
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTG 194
G +Q+ AFSVRPV NFDEVT H+I+CI+ HL NSKSQ
Sbjct: 132 GVRQLGAFSVRPVMNFDEVTFHFIDCIHTHLLNSKSQ----------------------- 168
Query: 195 LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIM 254
+ Q+ VDGLKDCDQ++LDYLQQ SS +E+G+H++ELS+QLK+P KI
Sbjct: 169 ----------FTKQYSVDGLKDCDQLVLDYLQQSSSMGQEKGIHMDELSQQLKLPMDKIK 218
Query: 255 DSIASLENEGLIYSTIDEFHYK 276
++I SLE+EGLIYSTIDEFHYK
Sbjct: 219 ETIRSLEDEGLIYSTIDEFHYK 240
>gi|356552567|ref|XP_003544637.1| PREDICTED: replication factor A protein 2-like [Glycine max]
Length = 292
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/278 (55%), Positives = 207/278 (74%), Gaps = 3/278 (1%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
MFS SQFDA+ AFSGGGF SQP D + + SR++ GLVPVTVK ISEAS SGD+K
Sbjct: 18 MFSGSQFDATTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQISEASQSGDEK 77
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD 120
SNF+ING+++ NVTLVG+++ K ER +DV+F LDDGTGR+ C+RW +E FDT+EMEA+ +
Sbjct: 78 SNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEAFDTKEMEAVMN 137
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP 180
MYVR+ G+LKSFQG KQ+VAFSVRPVTNFDE+ H+I+CI+ HL+ SK +V+G S+ P
Sbjct: 138 DMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLR-SKIKVEGITSANP 196
Query: 181 QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN 240
SSL T ++ + Q A + +Q VDGLK D++++DYL+Q S RG+HV+
Sbjct: 197 SS-GSSLETPVKSAPNRSQ-ASNPVCAQHSVDGLKGIDKLVMDYLEQHSDRSDGRGIHVD 254
Query: 241 ELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
ELS +LK+P +KI S+ +L ++G IYSTID+ HYK A
Sbjct: 255 ELSRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYKKA 292
>gi|18400560|ref|NP_565571.1| replicon protein A2 [Arabidopsis thaliana]
gi|186502765|ref|NP_001118376.1| replicon protein A2 [Arabidopsis thaliana]
gi|75338841|sp|Q9ZQ19.2|RFA2A_ARATH RecName: Full=Replication protein A 32 kDa subunit A;
Short=AtRPA32A; Short=RP-A p32 A; AltName: Full=DNA
replication protein A2 subunit A; AltName: Full=Protein
SUPPRESSOR OF ROS1; AltName: Full=Replication factor A
protein 2 A; Short=AtRPA2 A; Short=RF-A protein 2 A;
AltName: Full=Replicon protein A2 A
gi|20197764|gb|AAD18120.2| putative replication protein A1 [Arabidopsis thaliana]
gi|21594953|gb|AAM66059.1| putative replication protein A1 [Arabidopsis thaliana]
gi|26450159|dbj|BAC42198.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28973057|gb|AAO63853.1| putative replication protein A1 [Arabidopsis thaliana]
gi|82621223|gb|ABB86293.1| DNA replication protein A2 subunit [Arabidopsis thaliana]
gi|330252488|gb|AEC07582.1| replicon protein A2 [Arabidopsis thaliana]
gi|330252489|gb|AEC07583.1| replicon protein A2 [Arabidopsis thaliana]
Length = 279
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/280 (55%), Positives = 211/280 (75%), Gaps = 9/280 (3%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
MFSSSQF+ ++ FSGGGFM SQP Q+ + SSTA++RD QGLVPVTVK I+E S +K
Sbjct: 1 MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60
Query: 61 SNFMINGLEITNVTLVGLVYNKEE-RASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ 119
S +ING+ +TNV+LVGLV +K+E + ++V FTLDDGTGR+ CKRW SE FD REME+++
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
DG YVRL G+LK+FQGK Q++ FSVRP+ +F+EVT HYIECI+F+ QNS+SQ Q Q
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQ-----Q 175
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTN--LSSQFG-VDGLKDCDQMILDYLQQPSSSERERG 236
V S+NT+ + G + Q N +SSQ +G K+ D MILDYL+QP+ + R++G
Sbjct: 176 VGDVTQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQG 235
Query: 237 VHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+H++E+++QLKIP+ K+ + SLE +GLIYSTIDE+H+K
Sbjct: 236 IHIDEIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275
>gi|255634690|gb|ACU17707.1| unknown [Glycine max]
Length = 292
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/278 (55%), Positives = 206/278 (74%), Gaps = 3/278 (1%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
MFS SQFD + AFSGGGF SQP D + + SR++ GLVPVTVK ISEAS SGD+K
Sbjct: 18 MFSGSQFDTTTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQISEASQSGDEK 77
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD 120
SNF+ING+++ NVTLVG+++ K ER +DV+F LDDGTGR+ C+RW +E FDT+EMEA+ +
Sbjct: 78 SNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEAFDTKEMEAVMN 137
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP 180
MYVR+ G+LKSFQG KQ+VAFSVRPVTNFDE+ H+I+CI+ HL+ SK +V+G S+ P
Sbjct: 138 DMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLR-SKIKVEGITSANP 196
Query: 181 QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN 240
SSL T ++ + Q A + +Q VDGLK D++++DYL+Q S RG+HV+
Sbjct: 197 SS-GSSLETPVKSAPNRSQ-ASNPVCAQRSVDGLKGIDKLVMDYLEQHSDRSDGRGIHVD 254
Query: 241 ELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
ELS +LK+P +KI S+ +L ++G IYSTID+ HYK A
Sbjct: 255 ELSRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYKKA 292
>gi|388503518|gb|AFK39825.1| unknown [Lotus japonicus]
Length = 274
Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/274 (56%), Positives = 204/274 (74%), Gaps = 5/274 (1%)
Query: 3 SSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSN 62
SS+ FDA++AFSGGGFM + +D + +SRD+QGLVPVTV+ ISEASHSGDDKSN
Sbjct: 4 SSTNFDANSAFSGGGFMTTDSSHHSDSSPAPLKSRDTQGLVPVTVRQISEASHSGDDKSN 63
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F+ING+ +TNVTLVG+V+ K E+ ++VNF LDDGTGR+ C+RW +E +DT+EM+ IQDGM
Sbjct: 64 FVINGVGLTNVTLVGMVFEKVEKNTEVNFVLDDGTGRIKCRRWVNETYDTKEMDQIQDGM 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQM 182
YVRL G+LKSFQG +Q+VAFSVRPVTNFDE+ H+I+CI+ HL SK +V+G + P
Sbjct: 124 YVRLYGHLKSFQGVRQLVAFSVRPVTNFDEIPFHFIDCIHNHLY-SKVKVEGI-TGNPPS 181
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
D SL +AR + Q A +N GVD LK CD+++ DYLQQ S + E G+HV+EL
Sbjct: 182 SDLSL-IAARNAPN--QAASSNPLYAHGVDQLKGCDKLVFDYLQQHSDTSDESGIHVDEL 238
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
S QL++P KI S+ L+ EG +YSTIDE H+K
Sbjct: 239 SLQLRLPLDKIRSSLEVLKQEGYVYSTIDEDHHK 272
>gi|297825411|ref|XP_002880588.1| ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp. lyrata]
gi|297326427|gb|EFH56847.1| ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp. lyrata]
Length = 279
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 212/280 (75%), Gaps = 9/280 (3%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
MFSSSQF+ ++AFSGGGFM SQP Q+ + SSTA++R+ QGLVPVTVK I+E + +K
Sbjct: 1 MFSSSQFEPNSAFSGGGFMSSQPSQAYESSSSTAKNREFQGLVPVTVKQITECFQTSGEK 60
Query: 61 SNFMINGLEITNVTLVGLVYNKE-ERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ 119
S +ING+ +TNV+LVGLV +K+ + ++V FTLDDGTGR+ CKRW +E FD REME+++
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDVSKVTEVRFTLDDGTGRIDCKRWVNETFDAREMESVR 120
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
DG YVR+ G+LK+FQGK Q++ FSVRP+ +F+EVT HYIECI+F+ QNS+SQ Q Q
Sbjct: 121 DGTYVRVNGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQGQ-----Q 175
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTN--LSSQFG-VDGLKDCDQMILDYLQQPSSSERERG 236
V S+NT+ + G + Q P N +SSQ +G K+ D MILDYL+QP+ + R++G
Sbjct: 176 VGDVTQSVNTTFQGGSNTNQATPLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQG 235
Query: 237 VHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+H++E+++QLK+P+ K+ + SLE +GLIYSTIDE+H+K
Sbjct: 236 IHIDEIAQQLKVPKNKLEGVVQSLEGDGLIYSTIDEYHFK 275
>gi|68299229|emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
Length = 299
Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/274 (52%), Positives = 200/274 (72%), Gaps = 4/274 (1%)
Query: 4 SSQFDASNAFSGGGFMPSQPPQSA-DYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSN 62
++QFD + AFSGGGFMPSQ Q+A D+ S ++RDSQ L+P+TVK ISEA S DDK+N
Sbjct: 24 NNQFDGNAAFSGGGFMPSQATQTASDHSFSPTKNRDSQTLIPLTVKQISEAFQSSDDKTN 83
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F+I+G+++ NV LVG+++NK E + V+F +DDGTGR+ C RW +E DT+EMEA+ +G+
Sbjct: 84 FLIDGVDVNNVKLVGILFNKAEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEMEALTNGI 143
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQM 182
YVR+ G+LK FQGKKQ++A+SVRPV +++E+ H+ E IY H NS+ + Q S
Sbjct: 144 YVRVHGHLKGFQGKKQLMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRKQQDSSFMSAQ 203
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
V SS S T L GYQ + +N F +DG+ +M+LDYLQQPS E+GVH NEL
Sbjct: 204 VPSS---SFNTPLKGYQASASNQFPGFNMDGIGGVHKMVLDYLQQPSCLALEKGVHRNEL 260
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++QL++P +KIM ++ +LE+EGL+YSTID+FHYK
Sbjct: 261 AQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYK 294
>gi|449457165|ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
sativus]
gi|449500253|ref|XP_004161048.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
sativus]
Length = 277
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 137/276 (49%), Positives = 194/276 (70%), Gaps = 9/276 (3%)
Query: 4 SSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNF 63
+SQFD + AFSGGGFMPSQ Q+ D+ S A++RD Q L+P+TVK I++A S DDKSNF
Sbjct: 3 ASQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNF 62
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
+I+G+++ NV LVG+V N+ R +DV F LDDGTGR+ C +W +E D+ E+E I DGMY
Sbjct: 63 VIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMY 122
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPS--SQPQ 181
VR+ G+LKSFQGK+ + FS+RPVT+++E+T H+IE IY H N++ + Q S +QPQ
Sbjct: 123 VRVHGHLKSFQGKRTLNVFSIRPVTDYNEITNHFIESIYVHFYNTRLRKQQSSSMTTQPQ 182
Query: 182 MVDSSLNTSARTGLSGYQTAPTN-LSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN 240
M + S T + YQ N + Q G D K +QM+LD+LQ P S + ERG H +
Sbjct: 183 MTNLS-----NTPMKVYQAPIANQYTGQAGGDSWKSLEQMVLDFLQLP-SCDSERGAHRD 236
Query: 241 ELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+++QLK+P +K++ ++ +LE EGLIYST D+FH+K
Sbjct: 237 VIAQQLKVPLEKLIPAMKNLEEEGLIYSTTDDFHFK 272
>gi|356546205|ref|XP_003541521.1| PREDICTED: replication factor A protein 2-like [Glycine max]
Length = 277
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 15/279 (5%)
Query: 3 SSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSN 62
S+SQFD + AFSGGGFMPSQ Q D +++RD+Q L+P+TVK I +AS S DDK N
Sbjct: 4 SASQFDGNAAFSGGGFMPSQTTQGPDSSFVPSKNRDAQSLLPLTVKQIYDASQSSDDKIN 63
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
+I+G+++TNVTLVG V NK R +DV F LDDGTGR+ C +W E DT E EAI +GM
Sbjct: 64 LIIDGVDVTNVTLVGRVSNKAGRITDVTFVLDDGTGRIECNKWLHEAVDTNEAEAILEGM 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQM 182
Y RL G LK FQGK+ + FS RPVT+F+E+ H+ +CIY HL NSK + P+ Q
Sbjct: 124 YARLHGQLKHFQGKRTLNVFSFRPVTDFNEIASHFTDCIYVHLYNSKLRTS-VPNQQ--- 179
Query: 183 VDSSLNTSARTGLSGYQ---TAPTNLSSQFGVDGLK--DCDQMILDYLQQPSSSERERGV 237
++S GYQ PTN S V+G K + M+LD+L P++S R GV
Sbjct: 180 -----HSSPIPPTIGYQAQVVPPTNQFSDQHVNGQKGVTVEAMVLDFLHHPANSSRNEGV 234
Query: 238 HVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
H + +++ L I K+M ++ +L +EG IY TI + HYK
Sbjct: 235 HRDHIAQHLGISLDKLMLAVKNLIDEGAIYETIGD-HYK 272
>gi|224143708|ref|XP_002325047.1| predicted protein [Populus trichocarpa]
gi|222866481|gb|EEF03612.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/278 (43%), Positives = 183/278 (65%), Gaps = 13/278 (4%)
Query: 1 MFSSSQFDASNA-FSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
M+ SSQFD S A F GGGFMP+Q SS +++R+++ L P+TVK IS + ++
Sbjct: 1 MYGSSQFDGSAAAFMGGGFMPTQTAHPPSDSSSISKNREARCLFPLTVKQISNLA--SNN 58
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ 119
+SNF+I+G E+ NVT+VG V +KE++AS+ F +DDGTG++ C +W E DT +M I
Sbjct: 59 ESNFIIDGAEVNNVTIVGRVSHKEDKASEYTFLVDDGTGQIECTKWVQESLDTEQMGEIL 118
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
GMYVR+ G+L+ QG++ + FS+RPVT+F+E+ H+IECIY H N++ +QG +SQ
Sbjct: 119 VGMYVRVHGHLRGLQGRRFLNVFSIRPVTDFNEIPGHFIECIYVHFYNTR--LQGV-TSQ 175
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLSSQF-GVDGLKDCDQMILDYLQQPSSSERERGVH 238
P + +S+ L GYQTAP SS + DGL + QMIL++LQQP+ E G H
Sbjct: 176 PPVANST-----SIPLKGYQTAPPYQSSVYSSADGLNNVSQMILNFLQQPAYLNTE-GAH 229
Query: 239 VNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ ++ QL IP K+ + + L + GL+Y+TI++ +YK
Sbjct: 230 YDVIARQLNIPMNKLKEELQMLVDNGLVYTTINDDYYK 267
>gi|297832926|ref|XP_002884345.1| hypothetical protein ARALYDRAFT_477538 [Arabidopsis lyrata subsp.
lyrata]
gi|297330185|gb|EFH60604.1| hypothetical protein ARALYDRAFT_477538 [Arabidopsis lyrata subsp.
lyrata]
Length = 278
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 176/276 (63%), Gaps = 12/276 (4%)
Query: 6 QFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMI 65
+FD + AF+GGGFMPSQ A SS+ ++RD + L+P+T+K +S AS +G+ SNF I
Sbjct: 5 EFDGNAAFAGGGFMPSQATTQAHDSSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSI 62
Query: 66 NGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVR 125
+G++I V +VG + E R + V F +DDGTG V C RW E +T EMEA++ GMYVR
Sbjct: 63 DGVDINTVAIVGRISRMENRITQVEFVVDDGTGWVDCVRWCQERQETEEMEAVKLGMYVR 122
Query: 126 LIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK----SQVQGFPSSQPQ 181
L G+LK FQGK+ + FS+RPVT+F+E+ H+ EC+Y H+ N+K S Q + +PQ
Sbjct: 123 LHGHLKIFQGKRSVNVFSIRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQATTTPRPQ 182
Query: 182 MVDSSLNTSARTGLSGYQTAPTN-LSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN 240
M S++ T A+ YQT P+N +QF D + Q +L+YL QP E GVH +
Sbjct: 183 MPYSTMPTPAKP----YQTGPSNQFPNQFN-DPMHGVKQTVLNYLNQPMHLVSEAGVHCD 237
Query: 241 ELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++ L+IP ++ D++ L N+G IYST+DE +K
Sbjct: 238 IIARDLRIPLPQVKDALEQLSNDGCIYSTMDETCFK 273
>gi|330318724|gb|AEC11022.1| replication protein a 30 kda subunit [Camellia sinensis]
Length = 222
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 155/198 (78%), Gaps = 1/198 (0%)
Query: 21 SQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVY 80
SQ Q+ D SS A+SR++ G+VP+TVK ISE++HSGD+KSN++++G+++ NVTL+G+V
Sbjct: 14 SQSTQATDIGSSPAKSRNAYGVVPITVKQISESAHSGDEKSNYVVDGVDVVNVTLIGMVS 73
Query: 81 NKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIV 140
K ER +DV FTLDDGTGR+ C RW +E FD++EME IQDG+YVR+ G +KS QG++Q++
Sbjct: 74 KKTERVTDVAFTLDDGTGRIDCNRWVNEAFDSKEMENIQDGIYVRVNGLIKSLQGRRQLI 133
Query: 141 AFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQT 200
AFSVRPVTNFDE++ H+IECI+FHLQNSK+++QG ++QPQ S+ T+ART
Sbjct: 134 AFSVRPVTNFDEISFHFIECIHFHLQNSKTKLQGNTTTQPQSATPSVKTAARTDQWISGQ 193
Query: 201 APTNL-SSQFGVDGLKDC 217
PTNL S Q VDGL+ C
Sbjct: 194 PPTNLFSGQCSVDGLRAC 211
>gi|18396383|ref|NP_566188.1| replication factor A2 [Arabidopsis thaliana]
gi|75330048|sp|Q8LFJ8.1|RFA2B_ARATH RecName: Full=Replication protein A 32 kDa subunit B;
Short=AtRPA32B; Short=RP-A p32 B; AltName: Full=DNA
replication protein A2 subunit B; AltName:
Full=Replication factor A protein 2 B; Short=AtRPA2 B;
Short=RF-A protein 2 B; AltName: Full=Replicon protein
A2 B
gi|21537031|gb|AAM61372.1| putative replication factor A [Arabidopsis thaliana]
gi|26450657|dbj|BAC42439.1| putative replication factor A [Arabidopsis thaliana]
gi|90186248|gb|ABD91500.1| At3g02920 [Arabidopsis thaliana]
gi|332640358|gb|AEE73879.1| replication factor A2 [Arabidopsis thaliana]
Length = 278
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/275 (43%), Positives = 176/275 (64%), Gaps = 12/275 (4%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
FD + AF+GGGFMPSQ A SS+ ++RD + L+P+T+K +S AS +G+ SNF I+
Sbjct: 6 FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSID 63
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRL 126
G++I V +VG + E R + V+F +DDGTG V C RW +T EMEA++ GMYVRL
Sbjct: 64 GVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRL 123
Query: 127 IGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK----SQVQGFPSSQPQM 182
G+LK FQGK+ + FSVRPVT+F+E+ H+ EC+Y H+ N+K S Q + +PQM
Sbjct: 124 HGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQM 183
Query: 183 VDSSLNTSARTGLSGYQTAPTN-LSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNE 241
S++ T A+ YQT P+N +QF D + Q +L+YL QP E GVH +
Sbjct: 184 PYSTMPTPAKP----YQTGPSNQFPNQFN-DSMHGVKQTVLNYLNQPMHIVSEAGVHCDI 238
Query: 242 LSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++ +L+IP ++ +++ L N+G IYST+DE +K
Sbjct: 239 IARELRIPLLQVKEALEQLSNDGCIYSTLDETCFK 273
>gi|6728969|gb|AAF26967.1|AC018363_12 putative replication factor A [Arabidopsis thaliana]
Length = 282
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 176/279 (63%), Gaps = 16/279 (5%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
FD + AF+GGGFMPSQ A SS+ ++RD + L+P+T+K +S AS +G+ SNF I+
Sbjct: 6 FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSID 63
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRL 126
G++I V +VG + E R + V+F +DDGTG V C RW +T EMEA++ GMYVRL
Sbjct: 64 GVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRL 123
Query: 127 IGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK----SQVQGFPSSQPQM 182
G+LK FQGK+ + FSVRPVT+F+E+ H+ EC+Y H+ N+K S Q + +PQM
Sbjct: 124 HGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLRGGSITQDTATPRPQM 183
Query: 183 VDSSLNTSARTGLSGYQTAPTN-----LSSQFGVDGLKDCDQMILDYLQQPSSSERERGV 237
S++ T A+ YQT P+N +QF D + Q +L+YL QP E GV
Sbjct: 184 PYSTMPTPAKP----YQTGPSNQNLFQFPNQFN-DSMHGVKQTVLNYLNQPMHIVSEAGV 238
Query: 238 HVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
H + ++ +L+IP ++ +++ L N+G IYST+DE +K
Sbjct: 239 HCDIIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFK 277
>gi|357138267|ref|XP_003570718.1| PREDICTED: replication protein A 32 kDa subunit-like [Brachypodium
distachyon]
Length = 278
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/286 (43%), Positives = 181/286 (63%), Gaps = 19/286 (6%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEA--SHSGD 58
M SSQ DA FS F SQ +A ++ ++ R + P+TVK I++A S SGD
Sbjct: 1 MMFSSQLDA---FSPSQFTSSQ--NAAADSTTPSKFRGASSTTPLTVKQIADAQLSGSGD 55
Query: 59 DKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAI 118
+ F+++G+EI N+ LVG+V K ERA+DV+FTLDDGTGR+ RW ++ D+ E AI
Sbjct: 56 KGAPFVVDGVEIANIRLVGMVNGKAERATDVSFTLDDGTGRLDFIRWVNDATDSAETAAI 115
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
Q+GMYV +IG LK Q KK AFSVRP+T+++EVT H+I+C+ H++N+KS+V
Sbjct: 116 QNGMYVAVIGTLKGLQDKKHATAFSVRPITDYNEVTLHFIQCVRIHIENTKSKV-----G 170
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQF----GVD--GLKDCDQMILDYLQQPSSSE 232
P +S++ TS LS T PT+L SQ G D G D +L L +P+++E
Sbjct: 171 SPAKTNSAIGTSLSNSLS-EATTPTSLKSQAPVTSGTDGSGTDDLHTQVLKILCEPANAE 229
Query: 233 RERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
E GVH++E++++ K+P +KI ++I + G IYSTID+FH+K A
Sbjct: 230 SEHGVHIDEITKRFKLPAEKIKEAIYYNVDIGHIYSTIDDFHFKSA 275
>gi|294460336|gb|ADE75749.1| unknown [Picea sitchensis]
Length = 281
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 180/271 (66%), Gaps = 18/271 (6%)
Query: 19 MPSQPPQSADYP-SSTARSRDSQGLVPVTVKMISEASHS-GDDKSNFMINGLEITNVTLV 76
MPSQ Q + SS +S + GL+P+TVK IS+A+ D+ SNF I+G+++ NVTLV
Sbjct: 20 MPSQATQVNEGGFSSVRKSGTATGLLPLTVKQISQATQKPSDENSNFTIDGVDVNNVTLV 79
Query: 77 GLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGK 136
G+V+NKEER +DV+F LDDGTGR+ KRW ++ ++ EM +Q+G YVR+ G+L+SFQ K
Sbjct: 80 GMVFNKEERVTDVSFYLDDGTGRMEVKRWVNDAMESAEMADVQNGSYVRVHGHLRSFQNK 139
Query: 137 KQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLS 196
K + AFSVRPVT+F+EVT H +ECI+ HL N K VQG ++QP +S + A+ +
Sbjct: 140 KLVNAFSVRPVTDFNEVTFHSLECIFVHLYNMK--VQG-GATQP----NSASPVAKGPPT 192
Query: 197 GYQTAPTNLSSQF------GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IP 249
+ P++ +QF V G KD ++M+ ++P++ E GVHV+++ +L
Sbjct: 193 PFSNTPSH--NQFMSPGPVSVGGAKDLNRMVQSIFEEPANLAIEHGVHVDDVVRRLHGFT 250
Query: 250 QKKIMDSIASLENEGLIYSTIDEFHYKFARG 280
+K+IM+SIA L NEG IYSTIDE HYK G
Sbjct: 251 KKQIMESIAFLINEGYIYSTIDEDHYKSTNG 281
>gi|334185046|ref|NP_001189796.1| replication factor A2 [Arabidopsis thaliana]
gi|332640359|gb|AEE73880.1| replication factor A2 [Arabidopsis thaliana]
Length = 298
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 32/295 (10%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSST--------------------ARSRDSQGLVPVT 46
FD + AF+GGGFMPSQ A SS+ R+RD + L+P+T
Sbjct: 6 FDGNAAFAGGGFMPSQATTQAHESSSSLKVYVSDSRRFSGISAAKSSIRNRDVRTLLPLT 65
Query: 47 VKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWA 106
+K +S AS +G+ SNF I+G++I V +VG + E R + V+F +DDGTG V C RW
Sbjct: 66 LKQLSSASTTGE--SNFSIDGVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWC 123
Query: 107 SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQ 166
+T EMEA++ GMYVRL G+LK FQGK+ + FSVRPVT+F+E+ H+ EC+Y H+
Sbjct: 124 HARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMY 183
Query: 167 NSK----SQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTN-LSSQFGVDGLKDCDQMI 221
N+K S Q + +PQM S++ T A+ YQT P+N +QF D + Q +
Sbjct: 184 NTKLRGGSITQDTATPRPQMPYSTMPTPAKP----YQTGPSNQFPNQFN-DSMHGVKQTV 238
Query: 222 LDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
L+YL QP E GVH + ++ +L+IP ++ +++ L N+G IYST+DE +K
Sbjct: 239 LNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFK 293
>gi|224126075|ref|XP_002329655.1| predicted protein [Populus trichocarpa]
gi|222870536|gb|EEF07667.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/281 (43%), Positives = 181/281 (64%), Gaps = 16/281 (5%)
Query: 1 MFSSSQFDASNA-FSGGGFMPSQPPQSADYPSSTA---RSRDSQGLVPVTVKMISEASHS 56
M S+FD S A F GGGFMP+Q + SS+ ++R+++ L P+TVK I+ +
Sbjct: 1 MHGGSEFDGSAAAFMGGGFMPTQSALPSSSDSSSFSISKNREARCLFPLTVKQINNLT-- 58
Query: 57 GDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREME 116
+D+SN +I+G E+ NVT+VG V +KE++AS+ +F +DDGTG++ C +W E DT +M
Sbjct: 59 SNDESNLIIDGAEVNNVTIVGRVSHKEDKASEYSFLIDDGTGQIECTQWVQESLDTEQMG 118
Query: 117 AIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFP 176
I GMYVR+ G+L+ QG++ + FS+RPVT+F+EV H+IECIY H N++ ++G
Sbjct: 119 EILVGMYVRVHGHLRGLQGRRFLNVFSIRPVTDFNEVPNHFIECIYVHFYNTR--IRGVT 176
Query: 177 SSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF-GVDGLKDCDQMILDYLQQPSSSERER 235
+ P V +S NTS L GYQ AP SS + DGL + QMIL++LQQPS E
Sbjct: 177 AQPP--VANSTNTS----LKGYQAAPPYQSSAYSSADGLNNASQMILNFLQQPSYLYTE- 229
Query: 236 GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
G H + ++ QL IP K+ + + L + GL+Y+TI++ +YK
Sbjct: 230 GAHYDAIAGQLNIPTDKLKEVLQVLVDNGLVYTTINDDYYK 270
>gi|115447461|ref|NP_001047510.1| Os02g0633400 [Oryza sativa Japonica Group]
gi|49388178|dbj|BAD25304.1| putative replication protein A2 [Oryza sativa Japonica Group]
gi|113537041|dbj|BAF09424.1| Os02g0633400 [Oryza sativa Japonica Group]
gi|215707148|dbj|BAG93608.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 298
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 171/279 (61%), Gaps = 17/279 (6%)
Query: 9 ASNAFSGGGFMPSQPPQSADYPSSTA----RSRDSQGLVPVTVKMISEASHSGDDKSNFM 64
AS+ F GGGFMPSQ +A+ S +SR++Q L+P+TVK I +AS + DDKSNF
Sbjct: 21 ASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNFA 80
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYV 124
+NG+E++ V LVG + NK +R +DV+FTLDDGTGRV RW ++ DT+EM IQ+G YV
Sbjct: 81 VNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADIQNGDYV 140
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQ--NSKSQVQ-----GFPS 177
+ G LK FQGK+Q+VA+SVR +TNF++VT H++ C++ HL+ KSQV G P+
Sbjct: 141 IVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTATGTPN 200
Query: 178 SQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGV 237
+ N S T + +AP N + G D ++L+ P+ + GV
Sbjct: 201 QTMPRDSMAYNQSPLTNQASTFSAPQNTGT-----GTNMID-LVLNVFHDPAVMNDDHGV 254
Query: 238 HVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
V+ +S +L +P++ + I + G +Y+TID+ HYK
Sbjct: 255 GVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYK 293
>gi|218191867|gb|EEC74294.1| hypothetical protein OsI_09546 [Oryza sativa Indica Group]
Length = 279
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 178/281 (63%), Gaps = 17/281 (6%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSG---DDKSNF 63
F +AFS F SQ +A ++ ++SR + +P+TVK ISEA SG + + F
Sbjct: 4 FSQPDAFSPSQFTSSQ--NAAADSTTPSKSRGASSTMPLTVKQISEAQQSGTTGEKGAPF 61
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
+++G+E NV LVGLV K ER +DV+FT+DDGTGR+ RW ++ D+ E A+Q+GMY
Sbjct: 62 VVDGVETANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMY 121
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
V +IG+LK Q +K+ AF++RPVT+++EVT H+I+C+ HL+N+KSQ+ G P
Sbjct: 122 VSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGG-----PAKT 176
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFG-----VDGLK-DCDQMILDYLQQPSSSERERGV 237
S++ +S+ G S T PT++ S +G K D + +L+ ++P++ E E GV
Sbjct: 177 YSAMGSSSSNGFS-EMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGV 235
Query: 238 HVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
H++E+ ++ ++P+ KI +I L + G IYSTIDE HYK A
Sbjct: 236 HIDEIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSA 276
>gi|222623970|gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryza sativa Japonica Group]
Length = 278
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 177/281 (62%), Gaps = 17/281 (6%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSG---DDKSNF 63
F +AFS F SQ +A ++ ++SR + +P+TVK ISEA SG + + F
Sbjct: 3 FSQPDAFSPSQFTSSQ--NAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPF 60
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
+++G+E NV LVGLV K ER +DV+FT+DDGTGR+ RW ++ D+ E A+Q+GMY
Sbjct: 61 VVDGVETANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMY 120
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
V +IG+LK Q +K+ AF++RPVT+++EVT H+I+C+ HL+N+KSQ+ P
Sbjct: 121 VSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQI-----GSPAKT 175
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFG-----VDGLK-DCDQMILDYLQQPSSSERERGV 237
S++ +S+ G S T PT++ S +G K D + +L+ ++P++ E E GV
Sbjct: 176 YSAMGSSSSNGFS-EMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGV 234
Query: 238 HVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
H++E+ ++ ++P+ KI +I L + G IYSTIDE HYK A
Sbjct: 235 HIDEIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSA 275
>gi|115450003|ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japonica Group]
gi|9801268|emb|CAC03572.1| replication protein A2 [Oryza sativa]
gi|48716324|dbj|BAD22936.1| replication protein A2 [Oryza sativa Japonica Group]
gi|113538135|dbj|BAF10518.1| Os02g0829100 [Oryza sativa Japonica Group]
gi|215737037|dbj|BAG95966.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 279
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 177/281 (62%), Gaps = 17/281 (6%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSG---DDKSNF 63
F +AFS F SQ +A ++ ++SR + +P+TVK ISEA SG + + F
Sbjct: 4 FSQPDAFSPSQFTSSQ--NAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPF 61
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
+++G+E NV LVGLV K ER +DV+FT+DDGTGR+ RW ++ D+ E A+Q+GMY
Sbjct: 62 VVDGVETANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMY 121
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
V +IG+LK Q +K+ AF++RPVT+++EVT H+I+C+ HL+N+KSQ+ P
Sbjct: 122 VSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQI-----GSPAKT 176
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFG-----VDGLK-DCDQMILDYLQQPSSSERERGV 237
S++ +S+ G S T PT++ S +G K D + +L+ ++P++ E E GV
Sbjct: 177 YSAMGSSSSNGFS-EMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGV 235
Query: 238 HVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
H++E+ ++ ++P+ KI +I L + G IYSTIDE HYK A
Sbjct: 236 HIDEIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYKSA 276
>gi|13516746|dbj|BAB40535.1| replication protein A 30kDa [Oryza sativa Japonica Group]
Length = 279
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 177/281 (62%), Gaps = 17/281 (6%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSG---DDKSNF 63
F +AFS F SQ +A ++ ++SR + +P+TVK ISEA SG + + F
Sbjct: 4 FSQPDAFSPSQFTSSQ--NAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPF 61
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
+++G+E NV LVGLV K ER +DV+F +DDGTGR+ RW ++ D+ E A+Q+GMY
Sbjct: 62 VVDGVETANVRLVGLVSGKTERNTDVSFMIDDGTGRLDFIRWVNDGADSAETAAVQNGMY 121
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
V +IG+LK Q +K+ AF++RPVT+++EVT H+I+C+ HL+N+KSQ+ P
Sbjct: 122 VSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQI-----GSPAKT 176
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFG-----VDGLK-DCDQMILDYLQQPSSSERERGV 237
S++ +S+ G S T PT++ S +G K D + +L+ ++P++ E E GV
Sbjct: 177 YSAMGSSSSNGFS-EMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGV 235
Query: 238 HVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
H++E+ ++L++P+ KI +I L + G IYSTIDE HYK A
Sbjct: 236 HIDEIVKRLRLPEAKIKVAIDYLADIGHIYSTIDESHYKSA 276
>gi|218191227|gb|EEC73654.1| hypothetical protein OsI_08182 [Oryza sativa Indica Group]
Length = 300
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 171/283 (60%), Gaps = 21/283 (7%)
Query: 9 ASNAFSGGGFMPSQPPQSADYPSSTA----RSRDSQGLVPVTVKMISEASHSGDDKSNFM 64
AS+ F GGGFMPSQ +A+ S +SR++Q L+P+TVK I +AS + DDKSNF
Sbjct: 19 ASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNFA 78
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW----ASEVFDTREMEAIQD 120
+NG+E++ V LVG + NK +R +DV+FTLDDGTGRV RW ++ DT+EM IQ+
Sbjct: 79 VNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWWDAMENDSTDTKEMADIQN 138
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQ--NSKSQVQ----- 173
G YV + G LK FQGK+Q+VA+SVR +TNF++VT H++ C++ HL+ KSQV
Sbjct: 139 GDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTAT 198
Query: 174 GFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSER 233
G P+ + N S T + +AP N + G D ++L+ P+
Sbjct: 199 GTPNQTMPRDSMAYNQSPLTNQASTFSAPQNTGT-----GTNMID-LVLNVFHDPAVMND 252
Query: 234 ERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ GV V+ +S +L +P++ + I + G +Y+TID+ HYK
Sbjct: 253 DHGVGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYK 295
>gi|388516063|gb|AFK46093.1| unknown [Medicago truncatula]
Length = 278
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 161/276 (58%), Gaps = 4/276 (1%)
Query: 4 SSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNF 63
++QFD + AF+GGGFMPSQ Q + + +++R+SQ L+P+T+K I+ A S DD++
Sbjct: 3 ANQFDGNAAFAGGGFMPSQTNQGGESSLTPSKNRESQTLLPLTIKQINHAPQSSDDRTGL 62
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
I+G+ + VTLVG V NK + ++ F LDDGTG + C +W E D +E+I +GMY
Sbjct: 63 TIDGVGVNTVTLVGRVCNKSGQITEFKFVLDDGTGTIECTKWLHEPADAMAVESILNGMY 122
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
VRL G LK FQGK + FS+RPVT+F+E+ H+IECIY HL NS+ Q Q
Sbjct: 123 VRLYGQLKGFQGKT-LSIFSLRPVTDFNEIASHFIECIYVHLYNSRLQYTQASIPSQQHA 181
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELS 243
+S+ + G P S Q +G K +++L+YL P+ E E GV ++
Sbjct: 182 PNSIQITPTKGYQAQAIPPNQFSGQHN-NGQKSVRELVLEYLALPTIRELEGGVFCGTIA 240
Query: 244 EQLKIP-QKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+QL + ++ ++ L EG+IY + + HYK
Sbjct: 241 KQLGVSLDNDVIPALDLLSGEGVIYEGLPK-HYKIC 275
>gi|357479633|ref|XP_003610102.1| Replication factor A protein [Medicago truncatula]
gi|355511157|gb|AES92299.1| Replication factor A protein [Medicago truncatula]
Length = 278
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 161/276 (58%), Gaps = 4/276 (1%)
Query: 4 SSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNF 63
++QFD + AF+GGGFMPSQ Q + + +++R+SQ L+P+T+K I+ A S DD++
Sbjct: 3 ANQFDGNAAFAGGGFMPSQTNQGGESSLTPSKNRESQTLLPLTIKQINHALQSSDDRTGL 62
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
I+G+ + VTLVG V NK + ++ F LDDGTG + C +W E D +E+I +GMY
Sbjct: 63 TIDGVGVNTVTLVGRVCNKSGQITEFKFVLDDGTGTIECTKWLHEPADAMAVESILNGMY 122
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
VRL G LK FQGK + FS+RPVT+F+E+ H+IECIY HL NS+ Q Q
Sbjct: 123 VRLYGQLKGFQGKT-LSIFSLRPVTDFNEIASHFIECIYVHLYNSRLQYTQASIPSQQHA 181
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELS 243
+S+ + G P S Q +G K +++L+YL P+ E E GV ++
Sbjct: 182 PNSIQITPTKGYQAQAIPPNQFSGQHN-NGQKSVQELVLEYLALPTIRELEGGVFCGTIA 240
Query: 244 EQLKIP-QKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+QL + ++ ++ L EG+IY + + HYK
Sbjct: 241 KQLGVSLDNDVIPALDLLSGEGVIYEGLPK-HYKIC 275
>gi|302768771|ref|XP_002967805.1| hypothetical protein SELMODRAFT_440021 [Selaginella moellendorffii]
gi|300164543|gb|EFJ31152.1| hypothetical protein SELMODRAFT_440021 [Selaginella moellendorffii]
Length = 279
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 172/277 (62%), Gaps = 15/277 (5%)
Query: 8 DASNAFSGGGFMPSQPPQSADY---PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFM 64
+A+ F GGGFMPSQP A PS S GL P+TVK +S A S D N +
Sbjct: 5 NAAMDFGGGGFMPSQPSGFATGGGDPSVKKSGAPSSGLFPLTVKQMSRAIQSATD-DNLI 63
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW--ASEVFDTREMEAIQDGM 122
++G ++NVT+VG++ KEERA+D++F LDDGTGRV KRW + + + ++ +IQ G
Sbjct: 64 VDGQSMSNVTMVGMLLGKEERATDISFMLDDGTGRVEVKRWIESPDAPEALQLHSIQHGQ 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFP--SSQP 180
YVR+ G+L++FQ K+ +VAF+V+P+T+F+E+T H+++CI+ H N+KSQ P + P
Sbjct: 124 YVRIHGHLRTFQNKRTVVAFAVKPITDFNEITFHFLDCIFAHTYNTKSQGAARPDGPASP 183
Query: 181 QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN 240
+ + ++ + AP N +G+ +C + + ++PS E E+G+HV+
Sbjct: 184 PTFNHTNYSNPVSNPYATPAAPAN------SNGMSECQRRVQAVFEEPSVKESEQGLHVD 237
Query: 241 ELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
E++ ++ +K++ D++ L NEG +YST+D+ H+K
Sbjct: 238 EIARRITGFSKKQVRDAVEFLVNEGYVYSTVDDEHFK 274
>gi|302799926|ref|XP_002981721.1| hypothetical protein SELMODRAFT_421246 [Selaginella moellendorffii]
gi|300150553|gb|EFJ17203.1| hypothetical protein SELMODRAFT_421246 [Selaginella moellendorffii]
Length = 279
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 172/277 (62%), Gaps = 15/277 (5%)
Query: 8 DASNAFSGGGFMPSQPPQSADY---PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFM 64
+A+ F GGGFMPSQP A PS S GL P+TVK +S A S D N +
Sbjct: 5 NAAMDFGGGGFMPSQPSGFATGGGDPSVKKSGAPSSGLFPLTVKQMSRAIQSSTD-DNLI 63
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW--ASEVFDTREMEAIQDGM 122
++G ++NVT+VG++ KEERA+D++F LDDGTGRV KRW + + + ++ +IQ G
Sbjct: 64 VDGQSMSNVTMVGMLLGKEERATDISFMLDDGTGRVEVKRWIESPDAPEALQLHSIQHGQ 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPS--SQP 180
YVR+ G+L++FQ K+ +VAF+V+P+T+F+E+T H+++CI+ H N+KSQ P + P
Sbjct: 124 YVRIHGHLRTFQNKRTVVAFAVKPITDFNEITFHFLDCIFAHTYNTKSQGAARPDGPASP 183
Query: 181 QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN 240
+ + ++ + AP N +G+ +C + + ++PS E E+G+HV+
Sbjct: 184 PTFNHTNYSNPVSNPYATPAAPAN------SNGMSECQRRVQAVFEEPSVKESEQGLHVD 237
Query: 241 ELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
E++ ++ +K++ D++ L NEG +YST+D+ H+K
Sbjct: 238 EIARRITGFSKKQVRDAVEFLVNEGYVYSTVDDEHFK 274
>gi|194693140|gb|ACF80654.1| unknown [Zea mays]
gi|413939586|gb|AFW74137.1| replication protein A subunit [Zea mays]
Length = 273
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 170/269 (63%), Gaps = 16/269 (5%)
Query: 18 FMPSQ--PPQSADYPSST-ARSRDSQGLVPVTVKMISEASHSG--DDKSNFMINGLEITN 72
F PSQ Q+A S+T ++ R + +P+TVK + +A SG + + F++NG+E+ N
Sbjct: 9 FSPSQFTSSQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMAN 68
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
+ LVG+V K ER +DV FTLDDGTGR+ RW ++ D+ E AIQ+GMY+ +IG+LK
Sbjct: 69 IRLVGMVNAKVERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGMYIAVIGSLKG 128
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
Q +K+ AFS+RP+T+F+EVT H+I+C+ H++N++ + P ++SS+ S
Sbjct: 129 LQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTE-----LKAGSPARINSSMGVSFS 183
Query: 193 TGLSGYQTAPTNLSSQFG--VDGLKDCD--QMILDYLQQPSSSERERGVHVNELSEQLK- 247
G S T PT+L S G D D +L++ +P++ E E GVHV+E+ ++ K
Sbjct: 184 NGFSESST-PTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVLKRFKL 242
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+P+K+I D+I + G +YSTIDEFHYK
Sbjct: 243 LPKKQITDAIDYNMDSGRLYSTIDEFHYK 271
>gi|326520341|dbj|BAK07429.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 277
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 177/287 (61%), Gaps = 22/287 (7%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQ--PPQSADYPSSTARSRDSQGLVPVTVKMISEA--SHS 56
M SSQ DA F PSQ Q+A S+ + R + G +P+TVK I++A + +
Sbjct: 1 MMFSSQVDA--------FSPSQFTASQNAAADSTPNKFRGASGTMPLTVKQIADAQLAGT 52
Query: 57 GDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREME 116
G+ F+++G+E NV LVG+V K ER +DV+FTLDDGTGR+ RW ++ D+ E
Sbjct: 53 GEKGGPFVVDGVETANVRLVGMVSGKVERNTDVSFTLDDGTGRIDFIRWVNDAADSAETA 112
Query: 117 AIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFP 176
AIQ+GMYV +IG+LK Q KK+ AF+VRP+T+++EVT H+I+C+ H +N+KS+V
Sbjct: 113 AIQNGMYVAVIGSLKGVQDKKRATAFAVRPITDYNEVTLHFIQCVRMHAENTKSKV---- 168
Query: 177 SSQPQMVDSSLNTSARTGLSGYQTAPTNLS----SQFGVDGLK-DCDQMILDYLQQPSSS 231
P +SS+ T L+ T P+ S + G +G + D +L+ ++P++
Sbjct: 169 -GSPTHTNSSMGTPFSNRLNEAATPPSVKSNPAPAASGTNGSETDFYTQVLNVFREPANM 227
Query: 232 ERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
E + GVH+++++++ ++P KI ++I + G IYSTID+FHYK A
Sbjct: 228 ESDHGVHMDDIAKRFRLPALKIKEAIDYHVDVGHIYSTIDDFHYKSA 274
>gi|357150333|ref|XP_003575423.1| PREDICTED: replication factor A protein 2-like [Brachypodium
distachyon]
Length = 297
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 162/272 (59%), Gaps = 18/272 (6%)
Query: 8 DASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMING 67
++S FSGGGFMPSQ + + SS R+R++Q L+PVTVK + +A DD+S+F +NG
Sbjct: 36 NSSTLFSGGGFMPSQATNTPEGSSSFPRTRNAQTLLPVTVKQLMDACQINDDRSSFAVNG 95
Query: 68 LEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLI 127
E++ V LVG + NK ER +DV+F LDD TGR+ RW +E DT EM +++G YV +
Sbjct: 96 TELSTVRLVGRMLNKTERVTDVSFILDDCTGRIDVNRWENETSDTNEMNEVKNGDYVIVN 155
Query: 128 GNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSL 187
G LK FQGK+ + A+SVR VTN++++T H++ CIY HL SKS+ Q L
Sbjct: 156 GCLKGFQGKRHVNAYSVRLVTNYNDITHHFLYCIYVHLDLSKSKRQ-------------L 202
Query: 188 NTSARTGLSGYQTAPTN---LSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSE 244
N A+TG P N SS G + ++++ P E GV V ++++
Sbjct: 203 N--AKTGTLNQAPVPNNQAPTSSASGNSTGTELSKLVMSVFHDPVLINVEHGVSVQQVAD 260
Query: 245 QLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+LK+ ++ ++ L + G +YSTID+ HYK
Sbjct: 261 RLKLSEELARSTVQELVDLGNLYSTIDDNHYK 292
>gi|242067082|ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190 [Sorghum bicolor]
gi|241934661|gb|EES07806.1| hypothetical protein SORBIDRAFT_04g038190 [Sorghum bicolor]
Length = 278
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 168/286 (58%), Gaps = 28/286 (9%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSG--DD 59
FS SQF AS + PS + R + +P+TVK + +A SG +
Sbjct: 9 FSPSQFTASQNAAADSTTPS-------------KMRGASSTMPLTVKQVVDAQQSGTGEK 55
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ 119
+ F+++G+E+ N+ LVG+V K ER +DV FTLDDGTGR+ RW ++ D+ E A+Q
Sbjct: 56 GAPFVVDGVEMANIRLVGMVNGKVERTTDVTFTLDDGTGRLDFIRWVNDASDSSETAAVQ 115
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
+GMYV +IG+LK Q +K+ AFS+RP+T+F+EVT H+I+C+ H++N+K +
Sbjct: 116 NGMYVAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTK-----LKAGS 170
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLSSQ------FGVDGLKDCDQMILDYLQQPSSSER 233
P SS+ S G S T PT+L S G D ++ +L + +P++ E
Sbjct: 171 PARTSSSMGVSVSNGFSESST-PTSLKSNPAPLTGGGSGSDTDLNKQVLHFFSEPANLES 229
Query: 234 ERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
E GVHV+E+ +Q K +P+ KI ++IA + G +YSTID+FH+K A
Sbjct: 230 EHGVHVDEVYKQFKQLPKDKIKEAIAFHVDAGHLYSTIDDFHFKSA 275
>gi|195619742|gb|ACG31701.1| replication protein A 32 kDa subunit [Zea mays]
Length = 273
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 168/269 (62%), Gaps = 16/269 (5%)
Query: 18 FMPSQ--PPQSADYPSST-ARSRDSQGLVPVTVKMISEASHSG--DDKSNFMINGLEITN 72
F PSQ Q+A S+T ++ R + +P+TVK + +A SG + + F++NG+E+ N
Sbjct: 9 FSPSQFTSSQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMAN 68
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
+ LVG+V K ER +DV FTLDDGTGR+ RW ++ D+ E AIQ+GMY+ +IG+LK
Sbjct: 69 IRLVGMVNAKVERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGMYIAVIGSLKG 128
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
Q +K+ AFS+RP+T+F+EVT H+I+C+ H++N + + P + SS+ S
Sbjct: 129 LQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENIE-----LKAGSPARISSSMGVSFS 183
Query: 193 TGLSGYQTAPTNLSSQFG--VDGLKDCD--QMILDYLQQPSSSERERGVHVNELSEQLK- 247
G S T PT+L S G D D +L++ +P++ E E GVHV+E+ ++ K
Sbjct: 184 NGFSESST-PTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVLKRFKL 242
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+P+K+I D+I + G +YSTIDEFHYK
Sbjct: 243 LPKKQITDAIDYNMDSGRLYSTIDEFHYK 271
>gi|195628020|gb|ACG35840.1| replication factor A [Zea mays]
gi|223973475|gb|ACN30925.1| unknown [Zea mays]
gi|413937901|gb|AFW72452.1| Replication factor A [Zea mays]
Length = 272
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 156/267 (58%), Gaps = 21/267 (7%)
Query: 13 FSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
F GGGFMPSQ + S ++ R +Q L+P+TVK +A+ + D+SNF ING+E++
Sbjct: 25 FGGGGFMPSQSTVVPE-NSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVST 83
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
+ LVG + K ER +DV FTLDDGTG++ RW +E D +EM + YV +IG LK
Sbjct: 84 IRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKG 143
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQGK+ +VA++VR VTNF+E+TCH++ CI H+ ++ + +SA
Sbjct: 144 FQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHM---------------ELTGLKIYSSAA 188
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKK 252
T G AP+ + VDG ++L PS ++E G+H+ ++ ++LK+P
Sbjct: 189 T-YGGVAHAPSQPNP---VDG-NYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDV 243
Query: 253 IMDSIASLENEGLIYSTIDEFHYKFAR 279
+ +I + G IY+TID+FHYK R
Sbjct: 244 VSAAIQGHVDVGNIYNTIDDFHYKSVR 270
>gi|413937902|gb|AFW72453.1| hypothetical protein ZEAMMB73_145941 [Zea mays]
Length = 273
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 157/267 (58%), Gaps = 20/267 (7%)
Query: 13 FSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
F GGGFMPSQ + S ++ R +Q L+P+TVK +A+ + D+SNF ING+E++
Sbjct: 25 FGGGGFMPSQSTVVPE-NSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVST 83
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
+ LVG + K ER +DV FTLDDGTG++ RW +E D +EM + YV +IG LK
Sbjct: 84 IRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKG 143
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQGK+ +VA++VR VTNF+E+TCH++ CI H+ ++ G + +SA
Sbjct: 144 FQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHM-----ELTGL---------KQIYSSAA 189
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKK 252
T G AP+ + VDG ++L PS ++E G+H+ ++ ++LK+P
Sbjct: 190 T-YGGVAHAPSQPNP---VDG-NYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDV 244
Query: 253 IMDSIASLENEGLIYSTIDEFHYKFAR 279
+ +I + G IY+TID+FHYK R
Sbjct: 245 VSAAIQGHVDVGNIYNTIDDFHYKSVR 271
>gi|168062552|ref|XP_001783243.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665247|gb|EDQ51938.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 179/282 (63%), Gaps = 15/282 (5%)
Query: 8 DASNAFSGGGFMPSQPPQSADYPSS-TARSRDSQG----LVPVTVKMISEASHS-GDDKS 61
DAS F+GGGFMPSQ ++ SS + SR S G L P+TVKMIS+AS GDD
Sbjct: 10 DAS-LFAGGGFMPSQAATGNEFSSSVSGASRRSGGQDGGLQPLTVKMISQASQKPGDDA- 67
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW--ASEVFDTREMEAIQ 119
F ++GLEI NVTLVG+V++K+ER D +F LDD TGR+ KRW + ++ EM+++Q
Sbjct: 68 -FYVDGLEINNVTLVGMVHDKDERNIDTSFMLDDTTGRIEVKRWIDGQDSYEYFEMQSVQ 126
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
+ MYVR+ G+L++FQ K +VAFSVRP+T+F+EVT H++E I+ HL S+++ G +
Sbjct: 127 NFMYVRVHGHLRTFQNKLNVVAFSVRPITDFNEVTFHFLEVIHVHL--SRTRKGGVSAVA 184
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHV 239
+ +++ T + G+ P S+ ++C + + ++P+S + E+G+HV
Sbjct: 185 TPALGNTMAT-PQNGMYTPVKTPIASSAIPAGGAKEECQRRVHSIYEEPASLQVEQGLHV 243
Query: 240 NELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFARG 280
+++ +++ + ++ ++I L NEG IYSTID+ H+K G
Sbjct: 244 DQVVQRMVGFTRAQVREAIDFLVNEGYIYSTIDDDHHKSTNG 285
>gi|222623299|gb|EEE57431.1| hypothetical protein OsJ_07632 [Oryza sativa Japonica Group]
Length = 263
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 152/275 (55%), Gaps = 44/275 (16%)
Query: 9 ASNAFSGGGFMPSQPPQSADYPSSTA----RSRDSQGLVPVTVKMISEASHSGDDKSNFM 64
AS+ F GGGFMPSQ +A+ S +SR++Q L+P+TVK I +AS + DDKSNF
Sbjct: 21 ASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNFA 80
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYV 124
+NG+E++ V LVG + NK +R +DV+FTLDDGTGRV +A ++G YV
Sbjct: 81 VNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVCFVLFA------------RNGDYV 128
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQ--NSKSQVQGFPSSQPQM 182
+ G LK FQGK+Q+VA+SVR +TNF++VT H++ C++ HL+ KSQV ++
Sbjct: 129 IVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTAT---- 184
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
+ T R ++ Q+ TN +S F S+ + G N +
Sbjct: 185 -GTPNQTMPRDSMAYNQSPLTNQASTF--------------------SAPQNTGTGTNMI 223
Query: 243 SEQLKI-PQKKIMDSIASLENEGLIYSTIDEFHYK 276
L + +M I + G +Y+TID+ HYK
Sbjct: 224 DLVLNVFHDPAVMKIIIDQVDLGHLYATIDDHHYK 258
>gi|238013468|gb|ACR37769.1| unknown [Zea mays]
gi|413939585|gb|AFW74136.1| hypothetical protein ZEAMMB73_174168 [Zea mays]
Length = 307
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 165/303 (54%), Gaps = 50/303 (16%)
Query: 18 FMPSQ--PPQSADYPSST-ARSRDSQGLVPVTVKMISEASHSG--DDKSNFMINGLEITN 72
F PSQ Q+A S+T ++ R + +P+TVK + +A SG + + F++NG+E+ N
Sbjct: 9 FSPSQFTSSQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMAN 68
Query: 73 VT-----------------------------LVGLVYNKEERASDVNFTLDDGTGRVVCK 103
V LVG+V K ER +DV FTLDDGTGR+
Sbjct: 69 VPIILLFVLWSVDMQMFSALIHLPRFPFQIRLVGMVNAKVERTTDVTFTLDDGTGRLDFI 128
Query: 104 RWA-----SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYI 158
R S F ++GMY+ +IG+LK Q +K+ AFS+RP+T+F+EVT H+I
Sbjct: 129 RCTFSVGKSPCFCADVHWLSRNGMYIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFI 188
Query: 159 ECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG--VDGLKD 216
+C+ H++N++ + + P ++SS+ S G S T PT+L S G D
Sbjct: 189 QCVRMHIENTELK-----AGSPARINSSMGVSFSNGFSESST-PTSLKSSPAPVTSGSSD 242
Query: 217 CD--QMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEF 273
D +L++ +P++ E E GVHV+E+ ++ K +P+K+I D+I + G +YSTIDEF
Sbjct: 243 TDLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQITDAIDYNMDSGRLYSTIDEF 302
Query: 274 HYK 276
HYK
Sbjct: 303 HYK 305
>gi|413937900|gb|AFW72451.1| hypothetical protein ZEAMMB73_145941 [Zea mays]
Length = 215
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 106/156 (67%), Gaps = 5/156 (3%)
Query: 13 FSGGGFMPSQPPQSADYP--SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEI 70
F GGGFMPSQ S P S ++ R +Q L+P+TVK +A+ + D+SNF ING+E+
Sbjct: 25 FGGGGFMPSQ---STVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEV 81
Query: 71 TNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNL 130
+ + LVG + K ER +DV FTLDDGTG++ RW +E D +EM + YV +IG L
Sbjct: 82 STIRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGL 141
Query: 131 KSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQ 166
K FQGK+ +VA++VR VTNF+E+TCH++ CI H++
Sbjct: 142 KGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHME 177
>gi|226505284|ref|NP_001152264.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|194697154|gb|ACF82661.1| unknown [Zea mays]
gi|195654425|gb|ACG46680.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|413934694|gb|AFW69245.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 336
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 162/328 (49%), Gaps = 60/328 (18%)
Query: 9 ASNAFSGGGFMPSQ-----PPQSADYPSSTARSRDSQ--GLVPVTVKMISEASHSGDDKS 61
A++ F+G +PSQ P SA S A+SRD + G P TV+ I+ + + D S
Sbjct: 4 AASYFTGPTILPSQRATAAPDNSAVATPSLAKSRDPRCSGCSPTTVRHIARSFAAADATS 63
Query: 62 N----FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEA 117
I+G++ TNV L+G + + V+FTLDDGTG++ RW ++ D +E+
Sbjct: 64 GGDPVISIDGVDATNVWLLGRAVSVMNMEAGVSFTLDDGTGQIALMRWITDDIDAKEVSF 123
Query: 118 IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ---- 173
+Q+G+Y+++ L FQ K+ A S+RPVTNF+E+ H+IEC+Y HL+N + +++
Sbjct: 124 VQNGLYLKVQVTLVGFQAKQHGFAHSIRPVTNFNELALHFIECMYVHLENVRPKMKDQFP 183
Query: 174 ----------------------GFPSSQP-------QMVD-----------SSLNTSART 193
P+ P VD SSL T+A T
Sbjct: 184 RAVQANVSAHEMQAQVAHTVQTNVPAYMPFSGGVREHHVDFAPEVNQGRFPSSLQTNAST 243
Query: 194 -----GLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKI 248
G G Q +QF D M+L+ +QQP E GVHV+E++ +L +
Sbjct: 244 HAPFSGGVGEQQVHFTQPNQFTGGQQHDLQSMVLEVMQQPDILALENGVHVDEVARRLGM 303
Query: 249 PQKKIMDSIASLENEGLIYSTIDEFHYK 276
P+ +IM L + +YSTID++H+K
Sbjct: 304 PRAQIMAIAQRLVDLACLYSTIDDYHFK 331
>gi|219885111|gb|ACL52930.1| unknown [Zea mays]
gi|413943271|gb|AFW75920.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 337
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 159/330 (48%), Gaps = 66/330 (20%)
Query: 13 FSGGGFMPSQ-----PPQSADYPSSTARSRDSQ--GLVPVTVKMISE----ASHSGDDKS 61
F+G +PSQ P SA S A+SRD + G TV+ I+ A +GD
Sbjct: 5 FAGPAIVPSQHATAAPDNSAVATPSPAKSRDPRFSGSASTTVRHIARSFAAADATGDGDL 64
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDG 121
I+G++ TNV ++G V + + V+FTLDDGTG++ RW +E D +E+ +Q+G
Sbjct: 65 VIPIDGVDATNVWILGRVVSVVNMEASVSFTLDDGTGKIALTRWIAEDIDAKEVAFVQNG 124
Query: 122 MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG-FPSS-- 178
+Y+++ L FQ K+ A ++RPVTNF+EV H+IECIY HL+N + ++QG FP S
Sbjct: 125 IYLKVQVTLVGFQTKQYGFARAIRPVTNFNEVALHFIECIYLHLENVRQKMQGQFPRSIQ 184
Query: 179 --------QPQMVDS-----------------------------------SLNTSARTGL 195
Q Q+ S NT
Sbjct: 185 ANVSTYEMQAQVAHSIQTKSPAYMPFSGGAREHQVDFAPEVNHGRFLSSVQTNTPTHVPF 244
Query: 196 SG--------YQTAPTNLSSQFGVDGLK-DCDQMILDYLQQPSSSERERGVHVNELSEQL 246
SG + P S+ G G + D M+L+ +Q+P E GVHV+E++ +L
Sbjct: 245 SGGAREQQVHFTPQPNQFSAYPGTGGHQHDLQSMVLEVMQRPDILALENGVHVDEVARRL 304
Query: 247 KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+P +I+ + L N + STID++H+K
Sbjct: 305 GMPSAQILATAQRLVNLACLCSTIDDYHFK 334
>gi|356564842|ref|XP_003550656.1| PREDICTED: replication factor A protein 2-like [Glycine max]
Length = 178
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 56 SGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREM 115
S DD+ N +++G+++TNVTLVG V NK R +DV F LDDGTGR+ C +W E DT E
Sbjct: 3 SSDDRINLIVDGVDVTNVTLVGRVSNKTGRITDVTFVLDDGTGRIECSKWLHEAVDTNEA 62
Query: 116 EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGF 175
EAI DGMY RL G LK FQ K+ + FS RPVT+F+E+ H+ +CIY HL NS+
Sbjct: 63 EAILDGMYARLHGQLKHFQRKRTLTVFSFRPVTDFNEIASHFSDCIYVHLYNSR-----L 117
Query: 176 PSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLK--DCDQMILDYLQQPSSSER 233
SS P SS PTN S ++G K + M+LD+L P++S R
Sbjct: 118 RSSVPNQQHSS-PIPPTIVYQAQAVPPTNQFSDQHINGQKGVTVEAMVLDFLHHPTNSSR 176
>gi|226528868|ref|NP_001151380.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|195646308|gb|ACG42622.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 337
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 158/330 (47%), Gaps = 66/330 (20%)
Query: 13 FSGGGFMPSQ-----PPQSADYPSSTARSRDSQ--GLVPVTVKMISE----ASHSGDDKS 61
F+G +PSQ P SA S +SRD + G TV+ I+ A +GD
Sbjct: 5 FAGPAIVPSQHATAAPDNSAVATPSPVKSRDPRFSGSASTTVRHIARSFAAAEATGDGDL 64
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDG 121
I+G++ TNV ++G V + + V+FTLDDGTG++ RW +E D +E+ +Q+G
Sbjct: 65 VIPIDGVDATNVWILGRVVSVVNMEASVSFTLDDGTGKIALTRWIAEDIDAKEVAFVQNG 124
Query: 122 MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG-FPSS-- 178
+Y+++ L FQ K+ A ++RPVTNF+EV H+I+CIY HL+N + ++QG FP S
Sbjct: 125 IYLKVQVTLVGFQTKQYGFARAIRPVTNFNEVALHFIDCIYLHLENVRQKMQGQFPRSIQ 184
Query: 179 --------QPQMVDS-----------------------------------SLNTSARTGL 195
Q Q+ S NT
Sbjct: 185 ANVSTYEMQAQVAHSVQTKSPAHIPFSGGARDHQVDFAPEVNHGRFPSSVQTNTPTHVPF 244
Query: 196 SG--------YQTAPTNLSSQFGVDGLK-DCDQMILDYLQQPSSSERERGVHVNELSEQL 246
SG + P S+ G G + D M+L+ +Q+P E GVHV+E++ +L
Sbjct: 245 SGGAREQQVHFTPQPNQFSAYPGTGGHQHDLQSMVLEVMQRPDILALENGVHVDEVARRL 304
Query: 247 KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+P +IM + L N + STID++H+K
Sbjct: 305 GMPSAQIMVTARRLVNLACLCSTIDDYHFK 334
>gi|413943272|gb|AFW75921.1| hypothetical protein ZEAMMB73_214336 [Zea mays]
Length = 320
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 146/308 (47%), Gaps = 66/308 (21%)
Query: 13 FSGGGFMPSQ-----PPQSADYPSSTARSRDSQ--GLVPVTVKMISE----ASHSGDDKS 61
F+G +PSQ P SA S A+SRD + G TV+ I+ A +GD
Sbjct: 5 FAGPAIVPSQHATAAPDNSAVATPSPAKSRDPRFSGSASTTVRHIARSFAAADATGDGDL 64
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDG 121
I+G++ TNV ++G V + + V+FTLDDGTG++ RW +E D +E+ +Q+G
Sbjct: 65 VIPIDGVDATNVWILGRVVSVVNMEASVSFTLDDGTGKIALTRWIAEDIDAKEVAFVQNG 124
Query: 122 MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG-FPSS-- 178
+Y+++ L FQ K+ A ++RPVTNF+EV H+IECIY HL+N + ++QG FP S
Sbjct: 125 IYLKVQVTLVGFQTKQYGFARAIRPVTNFNEVALHFIECIYLHLENVRQKMQGQFPRSIQ 184
Query: 179 --------QPQMVDS-----------------------------------SLNTSARTGL 195
Q Q+ S NT
Sbjct: 185 ANVSTYEMQAQVAHSIQTKSPAYMPFSGGAREHQVDFAPEVNHGRFLSSVQTNTPTHVPF 244
Query: 196 SG--------YQTAPTNLSSQFGVDGLK-DCDQMILDYLQQPSSSERERGVHVNELSEQL 246
SG + P S+ G G + D M+L+ +Q+P E GVHV+E++ +L
Sbjct: 245 SGGAREQQVHFTPQPNQFSAYPGTGGHQHDLQSMVLEVMQRPDILALENGVHVDEVARRL 304
Query: 247 KIPQKKIM 254
+P +I+
Sbjct: 305 GMPSAQIL 312
>gi|195620672|gb|ACG32166.1| hypothetical protein [Zea mays]
Length = 183
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 20/198 (10%)
Query: 82 KEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVA 141
K ER +DV FTLDDGTG++ RW +E D +EM + YV +IG LK FQGK+ +VA
Sbjct: 4 KVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVVA 63
Query: 142 FSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTA 201
++VR VTNF+E+TCH++ CI H+ ++ + +SA T G A
Sbjct: 64 YAVRRVTNFNEITCHFLHCIQVHM---------------ELTGLKIYSSAAT-YGGVAHA 107
Query: 202 PTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLE 261
P+ + VDG ++L PS ++E G+H+ ++ ++LK+P + +I
Sbjct: 108 PSQPNP---VDG-NYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHV 163
Query: 262 NEGLIYSTIDEFHYKFAR 279
+ G IY+TID+FHYK R
Sbjct: 164 DVGNIYNTIDDFHYKSVR 181
>gi|357117453|ref|XP_003560482.1| PREDICTED: uncharacterized protein LOC100837028 [Brachypodium
distachyon]
Length = 431
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 20/262 (7%)
Query: 9 ASNAFSGGGFMPSQPPQSADY--------PSSTARSRDSQGLVPVTVKMISEA------S 54
A++ FSG MP P +A P S + + G VP TV I+ + +
Sbjct: 4 AASYFSGTAVMPRAGPAAAADYTAGAGTPPPSKSHNPRYSGCVPATVLHIARSFAAAAAA 63
Query: 55 HSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTRE 114
G F I+G+E +NV ++G V N R +DV+FTLDDGTG++ RW ++ D R+
Sbjct: 64 DDGGGDPVFSIDGVETSNVRVLGRVLNIVSRETDVSFTLDDGTGKIALVRWITDQLDARD 123
Query: 115 MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG 174
I+DG+YVR+ N+ FQ K+Q S+RPVTNF+EV HYIEC++ H++N++ ++QG
Sbjct: 124 TAYIRDGVYVRVHANVTGFQAKQQAFIRSIRPVTNFNEVVLHYIECMHVHMENTRIKMQG 183
Query: 175 FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERE 234
P V ++ T G+ +Q + + Q L + S S RE
Sbjct: 184 ---QLPPAVQTNAYTHEPGGVREHQ---VHFTPQVQQGQLPPAVRTNTSTYVPYSGSVRE 237
Query: 235 RGVHVNELSEQLKIPQKKIMDS 256
VH Q+ +P D+
Sbjct: 238 HQVHFTPQVNQVHLPSAVRADT 259
>gi|325187467|emb|CCA22005.1| replication protein A 32 kDa subunit putative [Albugo laibachii
Nc14]
Length = 284
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 146/280 (52%), Gaps = 27/280 (9%)
Query: 12 AFSGGGFMPSQPPQSAD--------YPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNF 63
++ GGFM S QS S+ + SRDSQ L+P+T++ + + DD F
Sbjct: 14 SYGAGGFMGSSNQQSTQGFDKGDGVERSNISGSRDSQTLLPITLRQLQAQDQAMDDV--F 71
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW-ASEVFDTRE--MEAIQD 120
++G EI+ V VG++ N +++VNF LDDG+G + + + A E D + M + D
Sbjct: 72 RVDGREISIVKAVGILQNVIPHSTNVNFQLDDGSGIIDGRLFVAQEDLDHADNIMSRLHD 131
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP 180
G+YV +G L++FQGK +SV P+ +F+ +T H++E +Y H N++ +Q SQ
Sbjct: 132 GIYVSAVGQLRTFQGKTSFSCYSVVPIEDFNAITLHFLEVMYTHCYNTRGNLQKANPSQH 191
Query: 181 QMVDSSLNTSARTGLSGYQTAPTNLSSQFGV--DGLKDCDQMILDYLQQPSSSERERGVH 238
Q TS+ Q N +S FG +++LD L + + G+
Sbjct: 192 Q-------TSSTGAPWAPQGPMVNTNSDFGALDSSFSPEQKIVLDVL---GTCTNDEGLP 241
Query: 239 VNELSEQL--KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
V+ + Q+ ++ + ++ + + L +EG +YSTIDE H+K
Sbjct: 242 VDRIYAQVQHQMSEPQLQNVLMYLTSEGHVYSTIDENHFK 281
>gi|413943273|gb|AFW75922.1| hypothetical protein ZEAMMB73_214336 [Zea mays]
gi|413943274|gb|AFW75923.1| hypothetical protein ZEAMMB73_214336 [Zea mays]
Length = 183
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 101/171 (59%), Gaps = 11/171 (6%)
Query: 13 FSGGGFMPSQ-----PPQSADYPSSTARSRDSQ--GLVPVTVKMISE----ASHSGDDKS 61
F+G +PSQ P SA S A+SRD + G TV+ I+ A +GD
Sbjct: 5 FAGPAIVPSQHATAAPDNSAVATPSPAKSRDPRFSGSASTTVRHIARSFAAADATGDGDL 64
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDG 121
I+G++ TNV ++G V + + V+FTLDDGTG++ RW +E D +E+ +Q+G
Sbjct: 65 VIPIDGVDATNVWILGRVVSVVNMEASVSFTLDDGTGKIALTRWIAEDIDAKEVAFVQNG 124
Query: 122 MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQV 172
+Y+++ L FQ K+ A ++RPVTNF+EV H+IECIY HL+N + +V
Sbjct: 125 IYLKVQVTLVGFQTKQYGFARAIRPVTNFNEVALHFIECIYLHLENVRQKV 175
>gi|53792832|dbj|BAD53865.1| putative replication protein A2 [Oryza sativa Japonica Group]
Length = 438
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 107/184 (58%), Gaps = 20/184 (10%)
Query: 9 ASNAFSGGGFMPSQPPQSADYP------------SSTARSRDSQ--GLVPVTVKMISEA- 53
A++ FSG MPSQ A P S ++ RD + G VP TV IS +
Sbjct: 4 AASYFSGTALMPSQR-SGAPAPEYSAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSF 62
Query: 54 ----SHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEV 109
+ G F I+G+E TNV ++G V + R +DV FTLDD TG++ RW ++
Sbjct: 63 AAALAADGGGDPVFSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQ 122
Query: 110 FDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK 169
DTR+ IQ+G+YV++ NL FQ KKQ +A S+RP+ NF+EV H+IEC++ HL++ +
Sbjct: 123 SDTRDTSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQ 182
Query: 170 SQVQ 173
S++Q
Sbjct: 183 SKMQ 186
>gi|226492312|ref|NP_001140245.1| uncharacterized protein LOC100272286 [Zea mays]
gi|194698682|gb|ACF83425.1| unknown [Zea mays]
gi|413939584|gb|AFW74135.1| hypothetical protein ZEAMMB73_174168 [Zea mays]
Length = 188
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 103/163 (63%), Gaps = 11/163 (6%)
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
++GMY+ +IG+LK Q +K+ AFS+RP+T+F+EVT H+I+C+ H++N++ +
Sbjct: 30 RNGMYIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTE-----LKAG 84
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG--VDGLKDCD--QMILDYLQQPSSSERE 234
P ++SS+ S G S T PT+L S G D D +L++ +P++ E E
Sbjct: 85 SPARINSSMGVSFSNGFSESST-PTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESE 143
Query: 235 RGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
GVHV+E+ ++ K +P+K+I D+I + G +YSTIDEFHYK
Sbjct: 144 HGVHVDEVLKRFKLLPKKQITDAIDYNMDSGRLYSTIDEFHYK 186
>gi|218198807|gb|EEC81234.1| hypothetical protein OsI_24288 [Oryza sativa Indica Group]
Length = 407
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 107/184 (58%), Gaps = 20/184 (10%)
Query: 9 ASNAFSGGGFMPSQPPQSADYP------------SSTARSRDSQ--GLVPVTVKMISEA- 53
A++ FSG MPSQ A P S ++ RD + G VP TV IS +
Sbjct: 4 AASYFSGTALMPSQR-SGAPAPEYSAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSF 62
Query: 54 ----SHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEV 109
+ G F I+G+E TNV ++G V + R +DV FTLDD TG++ RW ++
Sbjct: 63 AAALAADGGGDPVFSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQ 122
Query: 110 FDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK 169
DTR+ IQ+G+YV++ NL FQ KKQ +A S+RP+ NF+EV H+IEC++ HL++ +
Sbjct: 123 SDTRDTSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQ 182
Query: 170 SQVQ 173
S++Q
Sbjct: 183 SKMQ 186
>gi|301110905|ref|XP_002904532.1| replication protein A 32 kDa subunit, putative [Phytophthora
infestans T30-4]
gi|262095849|gb|EEY53901.1| replication protein A 32 kDa subunit, putative [Phytophthora
infestans T30-4]
Length = 259
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 150/267 (56%), Gaps = 20/267 (7%)
Query: 19 MPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGL 78
M SQP S P T RS +Q ++PVT+K + ++ ++GDD + ++G E++ V LVGL
Sbjct: 1 MSSQPSGSQSTP--TKRSGGAQSILPVTIKQL-QSLNAGDDDA-VRLDGQEVSTVRLVGL 56
Query: 79 VYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQ 138
+ N +++ + F LDDG+G C+ + + D E + +++G YVR++G L+SFQGK
Sbjct: 57 LTNLTPQSTSLRFQLDDGSGAFDCQYFVNADEDASEGD-LREGSYVRVVGKLRSFQGKAS 115
Query: 139 IVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGY 198
+ F+V PV + +E+T H +E IY H N+K + + + +S NT +
Sbjct: 116 LSCFNVVPVQDMNELTHHLLEVIYAHCYNTKGPLN---DGKADVTMTSFNTPTKGANQWN 172
Query: 199 Q-TAPTNLSSQFGVD-GLKDCD-----QMILDYLQQPSSSERERGVHVNELSEQL--KIP 249
Q A GVD G+ D + + ILD L +S +RG+ ++++ L ++
Sbjct: 173 QPNAGATGGFGGGVDYGMMDSNFSPEQKAILDVLGTCTS---DRGIKIDQIYADLNGQMN 229
Query: 250 QKKIMDSIASLENEGLIYSTIDEFHYK 276
++++ ++ L +EG +YSTIDE H+K
Sbjct: 230 EQQLRSALNYLTSEGHVYSTIDEDHFK 256
>gi|222636141|gb|EEE66273.1| hypothetical protein OsJ_22466 [Oryza sativa Japonica Group]
Length = 439
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 19/184 (10%)
Query: 9 ASNAFSGGGFMPSQP---PQS---------ADYPSSTARSRDSQ--GLVPVTVKMISEA- 53
A++ FSG MPSQ P++ A S ++ RD + G VP TV IS +
Sbjct: 4 AASYFSGTALMPSQRSAGPRARSTPAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSF 63
Query: 54 ----SHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEV 109
+ G F I+G+E TNV ++G V + R +DV FTLDD TG++ RW ++
Sbjct: 64 AAALAADGGGDPVFSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQ 123
Query: 110 FDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK 169
DTR+ IQ+G+YV++ NL FQ KKQ +A S+RP+ NF+EV H+IEC++ HL++ +
Sbjct: 124 SDTRDTSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQ 183
Query: 170 SQVQ 173
S++Q
Sbjct: 184 SKMQ 187
>gi|346471389|gb|AEO35539.1| hypothetical protein [Amblyomma maculatum]
Length = 247
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 142/264 (53%), Gaps = 30/264 (11%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGGFMP P S D P +R +VP T+ I D+ + LE+ V+
Sbjct: 7 GGGFMP---PDSQDTPQRKFAAR-HDNVVPCTIAQIHMM-----DQDTLTVGSLEVQYVS 57
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKR-WASEVFDTREMEAIQDGMYVRLIGNLKSF 133
LVGLV + +++++ VNFTLDD TG + +A E R M + +G YVR++G ++S
Sbjct: 58 LVGLVLSVDQQSTRVNFTLDDRTGPPIEGLIFAQEEEQMRVMRHLVEGSYVRVVGPVRSV 117
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSART 193
GK+Q+ AF V PVT+ +E+T H E +Y N +V GF S+ M ++TS+ +
Sbjct: 118 DGKRQLKAFKVFPVTDLNELTLHLAEVVY---ANMALRV-GFAST--SMKHEPMDTSSNS 171
Query: 194 GLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKK 252
L G A +NL GL +++ + +++ +++ G+ NE+ +LK +
Sbjct: 172 FLGG---AVSNL-------GLNQQQKLVYEVIRECTTN---IGISFNEICSKLKSLSNNS 218
Query: 253 IMDSIASLENEGLIYSTIDEFHYK 276
+ D + L NEG I++T+D+ HYK
Sbjct: 219 VRDVVEFLANEGHIFTTMDDEHYK 242
>gi|348665064|gb|EGZ04899.1| hypothetical protein PHYSODRAFT_535287 [Phytophthora sojae]
Length = 267
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 141/277 (50%), Gaps = 32/277 (11%)
Query: 19 MPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGL 78
M SQP S P T RS +Q ++PV++K + + D ++G E++ V LVGL
Sbjct: 1 MSSQPSGSQATP--TKRSGGAQSILPVSIKQLQTLGGASGDDDALRLDGQELSTVRLVGL 58
Query: 79 VYNKEERASDVNFTLDDGTGRVVCKRW-------ASEVFDTREMEAIQDGMYVRLIGNLK 131
+ N ++ + F LDDG+G C+ + ASE EM ++DG YVR++G L+
Sbjct: 59 LTNLTPHSTSLRFQLDDGSGAFDCQYFVTADDPDASE----SEMNRLRDGSYVRVVGKLR 114
Query: 132 SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSA 191
SFQGK + F+V PV + +E+T H +E IY H N++ G + + +S NT
Sbjct: 115 SFQGKASLSCFNVTPVDDLNELTHHLLEVIYVHCYNTRPVHDG----KADVTMTSFNTPT 170
Query: 192 RTGLSGYQTAPTNLSSQFGVDGLKDCDQM----------ILDYLQQPSSSERERGVHVNE 241
+ Q + + FG G D M ILD L +S +RG+ +++
Sbjct: 171 KGANQWNQPSAGAAAGGFGGGGAMDYGMMDSNFSPEQKAILDVLGTCTS---DRGLKIDQ 227
Query: 242 LSEQLK--IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ L+ + + ++ ++ L +EG +YSTIDE H+K
Sbjct: 228 IYADLRGQMTEPQLRSALNYLTSEGHVYSTIDEDHFK 264
>gi|225320683|dbj|BAH29737.1| replication protein A 32 kDa subunit [Dicyema japonicum]
Length = 250
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 141/262 (53%), Gaps = 23/262 (8%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTL 75
G F ++ P+ T + SQ L+P ++ + S DD+ F+I E++ +T+
Sbjct: 7 GSFASESETKAFGSPADTKIKQRSQTLIPCSISQLV-VSQQIDDR--FVIGRAELSQITI 63
Query: 76 VGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQG 135
VGL+ + +E S +++ LDD +G + + +V D+ + + +G YVR+ GNL+SF
Sbjct: 64 VGLIKSVKESPSRLDYELDDHSGYTIQVKLFVDVEDS-SVSQLHEGQYVRVFGNLRSFAS 122
Query: 136 KKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGL 195
+ +VAF + P+ + +E+T H E +Y HL S+ ++ P+M D
Sbjct: 123 VRSVVAFKILPIMDINEITMHLAEVVYSHLFLSRPP----KTAAPKMADFP--------- 169
Query: 196 SGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIM- 254
S +QT +N S+ F GL + +++ ++ +++ E+G+H++ L QL+ ++
Sbjct: 170 SNFQT--SNASNSFLEGGLTPVQRQVMEAIR---ANKDEQGIHMSALQRQLRNLGASVLN 224
Query: 255 DSIASLENEGLIYSTIDEFHYK 276
+++ L EG IYSTIDE H+K
Sbjct: 225 ETVDKLSEEGYIYSTIDEHHFK 246
>gi|384253039|gb|EIE26514.1| replication protein A, subunit RPA32 [Coccomyxa subellipsoidea
C-169]
Length = 277
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 33/278 (11%)
Query: 13 FSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHS--GDDKSNFMINGLEI 70
F GGGF+ SQ A P+ + + +GL VT+K + +A+ + DD ++F
Sbjct: 14 FGGGGFLGSQNDGDARSPAPKSIASRKEGLRAVTLKQLIDANKAEIHDDVNSFH------ 67
Query: 71 TNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDT--REMEAIQDGMYVRLIG 128
NVT VG + N E + V T+ DGTG +++++ D+ + + + G+YVR+ G
Sbjct: 68 -NVTCVGKILNVRENNNIVEMTIFDGTGTYTVHYYSNDIDDSMAQRIAEWRTGVYVRVHG 126
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLN 188
N+ F +I+A+++R +T+F+EVT H ++ I+ H +K G P S
Sbjct: 127 NVSDFDDNWRILAYNIRTITDFNEVTYHGLQAIFQHAHIAK----GAPGSGV-------- 174
Query: 189 TSARTGLSGYQTAPTNLSS---------QFGVDGLKDCDQMILDYLQQPSSSERERGVHV 239
A++G+ G A T + + G DGL + + +L +QP+ G+ V
Sbjct: 175 AQAQSGIGGAPVAQTGGAGGTEFGGGPDEVGNDGLTNIQRKVLSVFEQPAHLASSEGITV 234
Query: 240 NELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++S QL + K++ D++ L + IY+ DE+HYK
Sbjct: 235 EQVSAQLPNLTPKQVRDAVTFLMDNANIYTVSDEYHYK 272
>gi|402224913|gb|EJU04975.1| replication protein A subunit RPA32 [Dacryopinax sp. DJM-731 SS1]
Length = 281
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 142/269 (52%), Gaps = 28/269 (10%)
Query: 23 PPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNK 82
P S + PS R + L PVTV+ + ++ H+ D + + I+G + +VT V V K
Sbjct: 21 PYGSQESPSGNTRKAGTHSLRPVTVRQVVQSDHAFGD-AEWQIDGSDAPSVTFVAQVRGK 79
Query: 83 EERASDVNFTLDDGTGRVVCKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVA 141
++A++ F+L+DGTG++ + W+ S+ DT I++ ++VR+ G +K F KK + A
Sbjct: 80 AQQATNTAFSLEDGTGQIDARLWSDSQDPDTAAGSEIENDVWVRVQGTIKEFNKKKHVAA 139
Query: 142 FSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTA 201
VRP+T+ EV HY E + HL+ ++ QV+G + + + N A+
Sbjct: 140 QRVRPITDMQEVYYHYCEALSVHLELTRGQVKGGGGA---LTSGAANVHAQV------NG 190
Query: 202 PTNLSSQFGVDG-----------LKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIP- 249
PTN+SS + + G + D+ I+ +++ ++S+ G H+ +S + P
Sbjct: 191 PTNVSSDYTMGGGGGGTANNYAHMPALDRAIMQFIESSANSD---GCHLTAISRAVARPG 247
Query: 250 --QKKIMDSIASLENEGLIYSTIDEFHYK 276
++I ++ L ++G +Y+T D+ H++
Sbjct: 248 VTAEQISLALERLSDDGHVYNTHDDNHFQ 276
>gi|255078722|ref|XP_002502941.1| predicted protein [Micromonas sp. RCC299]
gi|226518207|gb|ACO64199.1| predicted protein [Micromonas sp. RCC299]
Length = 250
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 124/239 (51%), Gaps = 22/239 (9%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
LVPVTVKM+ A + + +NG E+ N+TL+G + + A++ +TLDDGTG V+
Sbjct: 26 LVPVTVKMLQTAIAASNVDDGLRVNGEEVHNITLLGKIIEASDTATNQVYTLDDGTGTVI 85
Query: 102 CKRW--ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIE 159
K+W A + + + + G Y R+ G++K F +VAFSVRPV + +EVT H++E
Sbjct: 86 VKQWVDADDADASSRKDELVVGKYARVYGHVKQFGSDTSVVAFSVRPVQDHNEVTYHFLE 145
Query: 160 CIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQ 219
+Y + N++ + P++ + Y + +S VD C
Sbjct: 146 AVYCNSHNAQ-RADAKPAAG----------------TAYAAPSSAPASAPAVDPGGSCVD 188
Query: 220 MILDYLQQPSSSERERGVHVNELSEQL--KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ P R+ GV ++ + +QL + + ++ +++ L NEG +YSTID+ H+K
Sbjct: 189 QAKAIFEGP-DGRRDEGVKIDVVVQQLNGRFTEAQVREAVEHLVNEGHLYSTIDDDHFK 246
>gi|449680782|ref|XP_002161880.2| PREDICTED: replication protein A 32 kDa subunit-like [Hydra
magnipapillata]
Length = 267
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 149/267 (55%), Gaps = 24/267 (8%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTL 75
GGFM S S SS + SQ L+P+T + +A ++ + F + ++I VT+
Sbjct: 15 GGFM-SPGVGSPAIDSSQKKKNRSQTLLPITAAIFHKAEYNSTEDV-FRHDDIDIHQVTI 72
Query: 76 VGLVYNKEERASDVNFTLDDGTGRVV-CKRW--ASEVFDTREMEAIQDGMYVRLIGNLKS 132
VG++ +E A+++++ +DD TG +V ++W A + D + ++ YVR++GN+KS
Sbjct: 73 VGVIREVQEAATNISYKIDDMTGDLVSVRKWIDAEDPSDNLKRSECREDTYVRVVGNMKS 132
Query: 133 FQG--KKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTS 190
F + ++AFS+ P+ +FDE++ H+++ IY +L K+ P + ++ NT
Sbjct: 133 FNDGQMRSVMAFSLVPIKDFDEISFHFLDVIYANLSLKKA---------PNLSIANNNTD 183
Query: 191 ARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IP 249
A L+ + P L F GL ++++ +Y+ S+ E+G+ + EL ++ K I
Sbjct: 184 AP--LNRFSNDP--LGGGFNDAGLTGNNKVVFNYI---SACTAEQGISIMELKQKTKNIG 236
Query: 250 QKKIMDSIASLENEGLIYSTIDEFHYK 276
+ ++ +S+ L NEG IYSTID+ H++
Sbjct: 237 EVQLRNSLEWLSNEGHIYSTIDDDHFR 263
>gi|63102328|gb|AAH95005.1| Rpa2 protein [Danio rerio]
gi|197247165|gb|AAI64047.1| Rpa2 protein [Danio rerio]
Length = 271
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 138/269 (51%), Gaps = 27/269 (10%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF Q D R+R +Q +VP TV + A + D F + +EI V
Sbjct: 18 SPGGFGSPAASQGGD---KKGRTR-AQQIVPCTVSQLLSAVQAEDV---FKVGEVEIAQV 70
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREM----EAIQDGMYVRLIG 128
T+VG++ + ++ ++ + +DD T + K+W DT +M I G YV++ G
Sbjct: 71 TIVGVIRSTDKSTINIQYKVDDMTAAPMDVKQW----IDTEDMGVDNSVIPPGSYVKVSG 126
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLN 188
NL+SFQ + +VAFSVR + + +EVT H +E + HLQ SK Q G + +S+N
Sbjct: 127 NLRSFQNNRSLVAFSVRVLEDMNEVTSHMLEVVNAHLQQSKPQNMGGGGGMMPVSHTSMN 186
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
+ TG GY A L V+GL +L ++ S + +G+ ++EL ++L
Sbjct: 187 SMGTTG--GYSGANMML-----VNGLSANQNQVLSLIK---SCQEPQGISMHELKQKLNS 236
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ I ++ L NEG I+STIDE H++
Sbjct: 237 MSANVIRQTVDFLSNEGHIFSTIDEDHFR 265
>gi|397642887|gb|EJK75519.1| hypothetical protein THAOC_02754, partial [Thalassiosira oceanica]
Length = 265
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 19/273 (6%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMI-NGLEITNVT 74
GGF S+D + R+ D Q L+PVT +MI++A D+ + + +G + +
Sbjct: 1 GGFDNDSRGGSSD-GNKPRRNYDDQTLIPVTCRMIAQALGDPSDQGDLTLKDGRSLHMIK 59
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREM-----EAIQDGMYVRLIGN 129
+VG V + R++++ L+DGTG + K W ++ D + EA ++ Y+R+IG
Sbjct: 60 IVGAVREADLRSTNLFVQLEDGTGLMQVKVWINDGDDPSAISQLRQEACREHSYIRVIGQ 119
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNT 189
++ F G +QIVA +RPVT+ +EVT H++E + + K Q S Q + +
Sbjct: 120 VREFDGSRQIVANDMRPVTDSNEVTYHFLEVAQSYEKMKKMQ-----SGQASGMGFGIGN 174
Query: 190 SARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILD-YLQQPSSSERERGVHVNELSEQLKI 248
A G Q + Q G+DG K + D + E G HVNE+ Q+ +
Sbjct: 175 MASGGPP--QGGGIKAAGQ-GLDGGKGAGNSLNDEVVNVIRGLGGESGAHVNEIVSQVSL 231
Query: 249 P---QKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+ I D++ L NEG IYSTIDE HY++A
Sbjct: 232 KGFSEMDIRDAVTYLSNEGHIYSTIDEDHYQYA 264
>gi|224143432|ref|XP_002324954.1| predicted protein [Populus trichocarpa]
gi|222866388|gb|EEF03519.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Query: 171 QVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNL-SSQFGVDGLKDCDQMILDYLQQPS 229
Q+ G S+QPQMV+SS+NT +G +GYQT+ +NL S QF VDG KD DQ++LD LQQ S
Sbjct: 21 QLHGGTSTQPQMVESSMNTPLWSGSNGYQTSTSNLMSKQFNVDGPKDFDQVVLDCLQQSS 80
Query: 230 SSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTID 271
S+ +E+G+ + EL +QLK+P +KI +SI SLE+EGLIYSTI+
Sbjct: 81 STGQEKGMQMVELCQQLKLPMEKIKESIRSLEDEGLIYSTIE 122
>gi|224001160|ref|XP_002290252.1| replication protein A2 [Thalassiosira pseudonana CCMP1335]
gi|220973674|gb|EED92004.1| replication protein A2, partial [Thalassiosira pseudonana CCMP1335]
Length = 288
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 145/286 (50%), Gaps = 24/286 (8%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEA----SHSGDDKSN 62
FD F G PS+ S P R D+Q L+PVT+KMI +A +G
Sbjct: 12 FDNEGGF-GSQNTPSRGGSSDGKPR---RDYDAQTLIPVTIKMILDAYATPGAAGGSGDL 67
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASE------VFDTREME 116
+ + I V +V V + EER++++ ++DGTG K W +E V R+
Sbjct: 68 QLKDERPIHMVKVVVAVRSHEERSTNLFLDIEDGTGFTQAKVWVNEGDECSGVVQLRQ-N 126
Query: 117 AIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFP 176
A +D YVR+IG ++ F G +QIVA VRPV++ DE+T H++E + + ++ K Q QG
Sbjct: 127 ACKDHQYVRIIGQVREFDGTRQIVANDVRPVSSGDEITYHFLEVAHSYEKHMKRQQQGGG 186
Query: 177 SSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG--VDGLKDCDQMILDYLQQPSSSERE 234
+ + A + Q +S+Q G + G + +L ++ Q + + +
Sbjct: 187 MGIGGAMGYGIGNMAS---APPQQGGLGISAQSGGNMGGGSALNDAVLAFI-QGAGNNND 242
Query: 235 RGVHVNELSEQLK---IPQKKIMDSIASLENEGLIYSTIDEFHYKF 277
GVHVNE++ ++ + + +I +L NEG IYSTIDE HY++
Sbjct: 243 SGVHVNEITAKVSANGFTESDVRTAINNLSNEGHIYSTIDENHYQY 288
>gi|393216998|gb|EJD02488.1| replication protein A, subunit RPA32 [Fomitiporia mediterranea
MF3/22]
Length = 273
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 141/277 (50%), Gaps = 23/277 (8%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRD-SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
GGGFM + P+++ S R SQ L PVT+K + +A + D + I+ E+ +
Sbjct: 7 GGGFMANSSPRTSSQNSPGGERRAASQSLRPVTIKQVLKADQAHSD-AELYIDRTEVAQI 65
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD---TREMEAIQDGMYVRLIGNL 130
T+V V +A++ + +DDGTGR+ + W D T + + + G YVR+ G L
Sbjct: 66 TVVAQVILVANQATNNVYHIDDGTGRIEARVWTDGSGDENQTDDHDGVSPGSYVRVTGVL 125
Query: 131 KSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTS 190
K FQ K+ I A ++RP+ + E+ H E +Y LQ Q+ S+ + D++ + +
Sbjct: 126 KHFQNKRYINASNIRPIKDAHELYFHLEEVMYVTLQLRNDQL----SNSDKAEDANGSFA 181
Query: 191 ARTGLSG--------YQTAPTNLSS-QFGVDGLKDCDQMILDYLQQPSSSERERGVHVNE 241
A T L G Y + PT S Q+ G + I ++ ++ E GVHV +
Sbjct: 182 ASTTLGGGTSANYSNYTSHPTATKSDQY--PGSTPLQRRITQFIATITADE---GVHVAK 236
Query: 242 LSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++ ++K+ + + ++ L N+G +Y+TI+E H K A
Sbjct: 237 IAREMKVDAELVSAALEDLLNDGHVYTTINESHVKLA 273
>gi|409045863|gb|EKM55343.1| hypothetical protein PHACADRAFT_173451 [Phanerochaete carnosa
HHB-10118-sp]
Length = 269
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 19/271 (7%)
Query: 10 SNAFSGGGFMPSQPPQSADYPSSTARSRDSQ-GLVPVTVKMISEASHSGDDKSNFMINGL 68
SN GGGFM S D PSS R ++SQ L PVTVK + AS D + F I+ +
Sbjct: 9 SNKNEGGGFMASP---GFDSPSSAVRRQNSQHALRPVTVKQLLSASQVHAD-AEFRIDDM 64
Query: 69 EITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIG 128
E+ ++T+VG V + + ++ +TLDDGTGR + W ++ + + I++ Y+R++G
Sbjct: 65 ELGHITVVGQVVQVKSQTTNSTYTLDDGTGRYEARHW-NDANAGEDDKGIKENTYIRVMG 123
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLN 188
LKSF G+ I A +RP + E H +E + L + G PS Q L
Sbjct: 124 TLKSFGGRNYINATHIRPCKDPHEPYYHTLEAMAVTLMFQR----GPPSGSDQQNGHMLV 179
Query: 189 TSART-GLSGY--QTAPTNLSSQFGVDGLKDCDQMILDY-LQQPSSSERERGVHVNELSE 244
A T G S Y Q + QF L + + I+++ L Q S ++ G+HV+ ++
Sbjct: 180 QKAGTNGASAYTAQASKNGAHDQFAF--LPELQRKIVNFILSQQSHTD---GIHVSAIAR 234
Query: 245 QLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ I ++ L +EG +Y+T DE H+
Sbjct: 235 AVGGDAHAISSALDQLMDEGHVYTTCDESHF 265
>gi|443894537|dbj|GAC71885.1| hypothetical protein PANT_5d00116 [Pseudozyma antarctica T-34]
Length = 249
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 131/236 (55%), Gaps = 9/236 (3%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT++ + A D ++F+++G E+ +T V +V N A+++ ++++DGTG++
Sbjct: 15 LRPVTIRQLINAEQPHPD-ADFIVDGAELGQLTFVAVVRNISRNATNIAYSVEDGTGQIE 73
Query: 102 CKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
++W S DT++ I+ +YVR++G LKSFQG++ + A +R V +++EV H +E
Sbjct: 74 VRQWLDSSSDDTQKASEIRQNVYVRVLGTLKSFQGRRSLSAGHMRAVVDYNEVLFHRLEA 133
Query: 161 IYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQ-TAPTNLSSQFGVDGLKDCDQ 219
I+ HLQ ++ G P +QP V L + Y + N+ Q+ L + +
Sbjct: 134 IHSHLQITRG-THGAPGTQPD-VGQGLIRGQPNDIGAYSGSNAQNVLDQY--QSLDELPR 189
Query: 220 MILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFH 274
I+ + Q + + + GVHV+ ++ L+ + ++ ++ L +EG +Y+ D+ H
Sbjct: 190 RIMGIVTQEAENHHD-GVHVSHIARMLRNVDIAQVRSAVEDLSSEGYLYTAADDDH 244
>gi|323448499|gb|EGB04397.1| hypothetical protein AURANDRAFT_32654 [Aureococcus anophagefferens]
Length = 242
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 36 SRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDD 95
+RD Q L+P+T+K + A+ + + F ++G E+ V +VG + ++++ + +T++D
Sbjct: 1 ARDKQSLIPMTIKQVLSATKAAGEDDGFAVDGREVNQVRVVGNILRQDKKETKHVYTIED 60
Query: 96 GTGRVVCKRWAS--EVFDTRE--MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFD 151
TG + C W + E T E E + +G YV +IG LK + GK + A+ VRP+ +F+
Sbjct: 61 QTGMLECTMWVNQEEAGATVEERAEKMVNGSYVCVIGGLKEYNGKLNVSAYDVRPIEDFN 120
Query: 152 EVTCHYIECIYFHLQNSKS-------------QVQGFPSSQPQMVDSSLNTSARTGLSGY 198
E+T HY+E IY H + + + F S ++ +++TS G++
Sbjct: 121 EITHHYLEAIYSHAKQTNAIKTGGGGAAAPASAFGAFNPSGGRVSADAMDTSGDGGMTAD 180
Query: 199 QTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIA 258
QT N + +G D G +VN ++ L + ++ +
Sbjct: 181 QTKVFNF---YTTEGTGD------------------EGCNVNSVASSLAMDLNQVKHIVE 219
Query: 259 SLENEGLIYSTIDEFHYK 276
L +EG +YSTID+ H+K
Sbjct: 220 FLSSEGHLYSTIDDDHHK 237
>gi|1403534|emb|CAA67116.1| p32-subunit of replication protein A [Rattus norvegicus]
Length = 266
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 141/279 (50%), Gaps = 26/279 (9%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
FSSS + A+ + S GGF P Q+ +R+R +Q +VP T+ + A+ + +
Sbjct: 5 FSSSSYGAAGGYTQSPGGFGSPTPSQA----EKKSRAR-AQHIVPCTISQLLSATLTDE- 58
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 59 --VFKIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENTVV 116
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + HL SK+ Q
Sbjct: 117 PPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHLMLSKANSQA-SVG 175
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+P M + + SG P N GL +L+ ++ + R G++
Sbjct: 176 RPSMSNPGMGEPGN--FSGNNFMPAN--------GLTVVQNQVLNLIK---ACPRPEGLN 222
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QL+ +P I ++ L NEG IYST+D+ H+K
Sbjct: 223 FQDLRSQLQHMPVASIKQAVDFLCNEGHIYSTVDDDHFK 261
>gi|55742354|ref|NP_001006795.1| replication protein A2, 32kDa [Xenopus (Silurana) tropicalis]
gi|50370153|gb|AAH76661.1| replication protein A2, 32kDa [Xenopus (Silurana) tropicalis]
Length = 275
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 135/269 (50%), Gaps = 21/269 (7%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q +RSR SQ +VP TV + A+ + F I E++ V
Sbjct: 25 SPGGFGSPAPTQG----EKKSRSR-SQQIVPCTVSQLLSATQ---NDEMFRIGEAELSQV 76
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG+V + E+ +++ + +DD T + ++W + E + G YV++ G+L+S
Sbjct: 77 TIVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEASCENMVVPPGSYVKVAGHLRS 136
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQ KK +VAF + PV + +E H +E ++ H+ + QG PS V +LNT R
Sbjct: 137 FQNKKSVVAFKIAPVDDMNEFVSHMLEVVHAHMTMNS---QGAPSGGGSAV--ALNTPGR 191
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQK 251
G SG + N ++ +GL IL+ ++ +E G+ EL +L +
Sbjct: 192 LGDSGGAFSGGNDNA---TNGLTPHQSQILNLIKSFKGNE---GMAFEELKNRLHGMNVN 245
Query: 252 KIMDSIASLENEGLIYSTIDEFHYKFARG 280
I ++ L NEG IYST+D+ HYK G
Sbjct: 246 TIRQAVDFLSNEGHIYSTVDDEHYKSTDG 274
>gi|13435424|gb|AAH04578.1| Replication protein A2 [Mus musculus]
Length = 270
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 141/279 (50%), Gaps = 26/279 (9%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
FSSS + + + S GGF P Q+ +R R +Q +VP T+ + A+ + +
Sbjct: 9 FSSSTYGGAGGYTQSPGGFGSPTPSQA----EKKSRVR-AQHIVPCTISQLLSATLTDE- 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 63 --VFRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASGENAVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SKS Q +
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHMMLSKSNSQA-SAG 179
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+P M + + S SG P N GL +L+ ++ + R G++
Sbjct: 180 RPSMSNPGM--SEPGNFSGNNFMPAN--------GLTVVQNQVLNLIK---ACPRPEGLN 226
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QL+ +P I ++ L NEG IYST+D+ H+K
Sbjct: 227 FQDLRSQLQHMPVPSIKQAVDFLCNEGHIYSTVDDDHFK 265
>gi|348526087|ref|XP_003450552.1| PREDICTED: replication protein A 32 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 293
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 33/287 (11%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKS 61
+S S S GGF Q + R+R +Q ++P TV + AS + +
Sbjct: 22 YSESSMAGGYTQSPGGFASPALSQGGE---KKGRTRANQ-IIPCTVSQLMSASQADE--- 74
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQD 120
+F + +++ VT+VG++ + ++ +++ + +DD TG + K+W + + +
Sbjct: 75 SFRVGDVDVAQVTIVGVIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDQSVDSTVLPP 134
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG------ 174
G YV++ GNL+SFQ + +VAFSVRP+ + +E+T H +E + H+ SK Q
Sbjct: 135 GTYVKVSGNLRSFQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHMALSKPQTMSGAGGGM 194
Query: 175 ----FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSS 230
P S+P M N + GY A + +GL +L ++ S
Sbjct: 195 SSSVMPMSRPTMGGMDGN------VGGYAGA-----NDMANNGLSANQNQVLCLIR---S 240
Query: 231 SERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+G+ + EL ++L + I ++ L NEG I+STIDE HYK
Sbjct: 241 CPEPQGISIQELKKRLGSMSMAVIKQAVEFLSNEGHIFSTIDEDHYK 287
>gi|348526085|ref|XP_003450551.1| PREDICTED: replication protein A 32 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 278
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 33/287 (11%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKS 61
+S S S GGF Q + R+R +Q ++P TV + AS + +
Sbjct: 7 YSESSMAGGYTQSPGGFASPALSQGGE---KKGRTRANQ-IIPCTVSQLMSASQADE--- 59
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQD 120
+F + +++ VT+VG++ + ++ +++ + +DD TG + K+W + + +
Sbjct: 60 SFRVGDVDVAQVTIVGVIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDQSVDSTVLPP 119
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG------ 174
G YV++ GNL+SFQ + +VAFSVRP+ + +E+T H +E + H+ SK Q
Sbjct: 120 GTYVKVSGNLRSFQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHMALSKPQTMSGAGGGM 179
Query: 175 ----FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSS 230
P S+P M N + GY A + +GL +L ++ S
Sbjct: 180 SSSVMPMSRPTMGGMDGN------VGGYAGA-----NDMANNGLSANQNQVLCLIR---S 225
Query: 231 SERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+G+ + EL ++L + I ++ L NEG I+STIDE HYK
Sbjct: 226 CPEPQGISIQELKKRLGSMSMAVIKQAVEFLSNEGHIFSTIDEDHYK 272
>gi|427787439|gb|JAA59171.1| Putative replication protein a 32 kda subunit [Rhipicephalus
pulchellus]
Length = 248
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 140/265 (52%), Gaps = 31/265 (11%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGGFMP P D P SR +VP T+ I + + I LE+ V+
Sbjct: 7 GGGFMP--PDSQQDTPQRKFASRHDN-VVPCTIAQIHMMG-----QDSLTIGDLEVQYVS 58
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKR-WASEVFDTREMEAIQDGMYVRLIGNLKSF 133
LVGLV + +++++ VNFTLDD TG + +A E R + + +G YVR++G ++S
Sbjct: 59 LVGLVTSVDQQSTRVNFTLDDRTGPPIEGLIFAQEEEQLRVLSHLVEGSYVRVVGPVRSA 118
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS-QPQMVDSSLNTSAR 192
+GK+Q+ AF V PVT+ +E+T H E ++ N +V PSS + + +D+S N+
Sbjct: 119 EGKRQLKAFKVFPVTDLNELTLHLAEVVH---ANMALRVGFTPSSVKHEPMDTSTNSF-- 173
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQK 251
L + G GL +++ + +++ +++ G+ +E+ +LK + +
Sbjct: 174 ------------LGAAAGNLGLNQQQKLVYEVIRECTTN---IGIGFDEICSRLKSMNKN 218
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
I D + L NEG I++T+D+ HYK
Sbjct: 219 TIRDVVEFLANEGHIFTTMDDEHYK 243
>gi|147899310|ref|NP_001085393.1| replication protein A2, 32kDa [Xenopus laevis]
gi|48734630|gb|AAH72101.1| MGC79017 protein [Xenopus laevis]
Length = 276
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 132/274 (48%), Gaps = 31/274 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q +RSR SQ +VP TV + A+ + F I E++ V
Sbjct: 26 SPGGFGSPAPTQG----EKKSRSR-SQQIVPCTVSQLLSATQ---NDEVFRIGEAELSQV 77
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG+V + E+ +++ + +DD T + ++W + E + G YV++ G+L+S
Sbjct: 78 TIVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEASCENMVVPPGSYVKVAGHLRS 137
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQ KK +VAF + PV + +E H +E ++ H+ + QG PS V +L+T R
Sbjct: 138 FQNKKSVVAFKIAPVEDMNEFVSHMLEVVHAHMAMNS---QGAPSGGGSTV--ALSTPGR 192
Query: 193 TG-----LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK 247
G SG PTN GL IL ++ S + G+ EL +L
Sbjct: 193 VGDSGRAFSGGNDNPTN--------GLTPHQSQILSLIK---SCKGNEGMAFEELKNRLH 241
Query: 248 -IPQKKIMDSIASLENEGLIYSTIDEFHYKFARG 280
+ I ++ L NEG IYSTID+ HYK G
Sbjct: 242 GMNVNTIRQAVEFLSNEGHIYSTIDDEHYKCTDG 275
>gi|449273178|gb|EMC82786.1| Replication protein A 32 kDa subunit, partial [Columba livia]
Length = 232
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 19/240 (7%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
SQ ++P TV + A H + F I EI+ VT+VGL+ + E+ ++V + +DD T
Sbjct: 5 SQSILPCTVSQLLAAEHM---EETFRIRDTEISQVTIVGLIRHAEKAPTNVLYKVDDMTA 61
Query: 99 RVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
+ ++W E + G YV++ G+++SFQ KK +VAF + P+ N +E T H
Sbjct: 62 APMDVRQWVDTDEAGSENVVVPPGTYVKIAGHVRSFQNKKSLVAFKIMPLENMNEFTSHM 121
Query: 158 IECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDC 217
+E ++ H+ KS + + V S +++ + GY S V+GL
Sbjct: 122 LEVVHAHMVLRKSHMPAY------RVPQSFSSAGTVDMEGYGGG-----SSLAVNGLTAH 170
Query: 218 DQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L+ ++ E G+ + EL QL+ + I ++ L +EG IYST+D+ HYK
Sbjct: 171 QSQVLNLIKNCPVPE---GMSLQELKLQLQNMSMSTIKQAVEFLSSEGHIYSTVDDDHYK 227
>gi|398391865|ref|XP_003849392.1| hypothetical protein MYCGRDRAFT_95717 [Zymoseptoria tritici IPO323]
gi|339469269|gb|EGP84368.1| hypothetical protein MYCGRDRAFT_95717 [Zymoseptoria tritici IPO323]
Length = 280
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 145/287 (50%), Gaps = 35/287 (12%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARS---RDSQGLVPVTVKMISEASHSGD 58
+S++ + A SGGGFMP QSA+ S+T R+ +D+ L PVT+K + +A H
Sbjct: 5 YSTTSYGAQGGASGGGFMPGS--QSANDNSATKRTGYGKDT--LRPVTIKQLLDAHHPHP 60
Query: 59 DKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWA-SEVFDTRE--- 114
D +FM++ E+T VT +G + N + ++V + +DDGTG + K W +E F+ E
Sbjct: 61 DADHFMVDDTEMTQVTFIGQIRNISTQTTNVTYKMDDGTGSIEVKVWIDAEAFEPAEGGG 120
Query: 115 -----MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK 169
+ ++ G Y R+ G LK+F K+ + A +VRP+ +F+E++ H +E HLQ +K
Sbjct: 121 GGGGKQKPVEQG-YARVWGRLKAFNNKRHVGAINVRPIQDFNEISYHLLEATVVHLQLTK 179
Query: 170 SQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG----VDGLKDCDQMILDYL 225
G N + G +GY + G + G+ + + L
Sbjct: 180 GPPGGG------------NEGQQPGANGYGQQLAQQNGGGGGGGDISGVSASARKVYSCL 227
Query: 226 QQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ S+ + G+H +++ ++ + ++M + L G +Y+T+D+
Sbjct: 228 K--STPQTNEGLHAQDIAGRVNMELSEVMKAGDELLGLGRVYTTVDD 272
>gi|110625961|ref|NP_035414.3| replication protein A 32 kDa subunit [Mus musculus]
gi|74146914|dbj|BAE41408.1| unnamed protein product [Mus musculus]
gi|74219891|dbj|BAE40529.1| unnamed protein product [Mus musculus]
gi|148698143|gb|EDL30090.1| replication protein A2, isoform CRA_a [Mus musculus]
Length = 270
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 26/279 (9%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
FSSS + + + S GGF P Q+ +R R +Q +VP T+ + A+ + +
Sbjct: 9 FSSSTYGGAGGYTQSPGGFGSPTPSQA----EKKSRVR-AQHIVPCTISQLLSATLTDE- 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 63 --VFRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASGENAVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SK Q +
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHMMLSKPNSQA-SAG 179
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+P M + + S SG P N GL +L+ ++ + R G++
Sbjct: 180 RPSMSNPGM--SEPGNFSGNNFMPAN--------GLTVVQNQVLNLIK---ACPRPEGLN 226
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QL+ +P I ++ L NEG IYST+D+ H+K
Sbjct: 227 FQDLRSQLQHMPVPSIKQAVDFLCNEGHIYSTVDDDHFK 265
>gi|430811574|emb|CCJ30960.1| unnamed protein product [Pneumocystis jirovecii]
Length = 906
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 133/262 (50%), Gaps = 37/262 (14%)
Query: 32 STARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNF 91
S+ + L PVT+K I EAS D + F I+G+EI ++ V +V N +++++ +
Sbjct: 48 SSVKRSSGNTLRPVTIKQILEASQQHPD-AEFKIDGVEIGQLSFVAVVRNISIQSTNITY 106
Query: 92 TLDDGTGRVVCKRWASEVFDTREMEAIQDG-----------MYVRLIGNLKSFQGKKQIV 140
++DGTG + K+W EMEAI D YVR+IG LK+F K+ I
Sbjct: 107 RMEDGTGLIEVKQWL-------EMEAIMDDNPKKNTDIVPDTYVRVIGQLKAFNNKRHIG 159
Query: 141 AFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQ- 199
A +R +T+ +EV H++E I HL ++ +Q V S +TS +S Y
Sbjct: 160 AHHIRLITDLNEVQYHFLEAIAIHLYFTRGPLQN-------GVFSKNHTSVDGNMSHYDF 212
Query: 200 ----TAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQKKIM 254
+ L++Q + L Q ++ + P ++E GV++++LS+ I I
Sbjct: 213 QDSISMKGALNAQIALHNLSPYLQKVMAAVHAAPDTNE---GVNIHQLSK--AIGGGNIE 267
Query: 255 DSIASLENEGLIYSTIDEFHYK 276
+I L ++GL+Y+TID+ H K
Sbjct: 268 QAIEELTSDGLLYTTIDDEHVK 289
>gi|340521449|gb|EGR51683.1| hypothetical protein TRIREDRAFT_55902 [Trichoderma reesei QM6a]
Length = 275
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 10/235 (4%)
Query: 40 QGLVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGT 97
+ L P+T+K I +E +SG D F ++G IT +T VG V + + +++ +DDGT
Sbjct: 41 ESLRPLTIKQILDAEEPYSGAD---FKVDGAPITQITFVGQVRSINPQQTNLTIKVDDGT 97
Query: 98 GRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
G++ K+W + + ++R+ G LKSF K+ + A +RPVT+F+EV H
Sbjct: 98 GQIDVKKWIDVDKQSDAEPGFEIDSHIRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHM 157
Query: 158 IECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDC 217
+E Y HL ++ G + DS G GY + + G +
Sbjct: 158 LEATYVHLFYTRGAAGGANAGGDANGDSMF----VDGGDGYNAGALAGQTASKLSGCSNK 213
Query: 218 DQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ + YL++ SS + GVH+N+L+ +L + + +M++ L +GLIY+TIDE
Sbjct: 214 AKSMYMYLKK-SSGDGADGVHLNKLTAELGLGLRDVMEAADELMGQGLIYTTIDE 267
>gi|359319064|ref|XP_003638988.1| PREDICTED: replication protein A 32 kDa subunit-like [Canis lupus
familiaris]
Length = 270
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 142/285 (49%), Gaps = 32/285 (11%)
Query: 2 FSSSQFDASNAFSG--------GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEA 53
F S+ S+AFSG GGF P Q+ +R+R +Q +VP T+ + A
Sbjct: 3 FGGSESYGSSAFSGAGGYTQSPGGFGSPTPSQA----EKKSRAR-AQHIVPCTISQLLSA 57
Query: 54 SHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDT 112
+ + F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W +
Sbjct: 58 TLVDE---MFKIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDAS 114
Query: 113 REMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQV 172
E + YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SKS
Sbjct: 115 SENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTAHILEVVNAHMILSKSNS 174
Query: 173 QGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSE 232
Q P+ + + + + + G G + P N GL +L+ ++ +
Sbjct: 175 QP-PAGRAPISNPGMGETGNFG--GISSIPAN--------GLTVAQNQVLNLIK---ACP 220
Query: 233 RERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
R G++ +L QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 221 RPEGLNFQDLKNQLQHMSVASIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|303279042|ref|XP_003058814.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459974|gb|EEH57269.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 275
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 139/274 (50%), Gaps = 16/274 (5%)
Query: 9 ASNAFSG-GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMING 67
+++ F+G GGF Q + ++ LVP+TVK + E+ + + F +NG
Sbjct: 8 SASQFAGQGGFTAGQTAAAGGADGGARSQGRAESLVPLTVKQLKESIDASNVDDAFKVNG 67
Query: 68 LEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW--ASEVFDTREMEA-IQDGMYV 124
E+ N+TL+G + + ++ + +T+DDGTG K W A + + +A + G YV
Sbjct: 68 EEVHNLTLLGKIVKANDSSTSLMYTIDDGTGTCEVKIWVDADDADGQNQNKAEWKVGAYV 127
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVD 184
R+ G+L++FQG++ ++AF++RPVT+F+E+T H++E +Y + N+ + +
Sbjct: 128 RVYGHLRAFQGQRGVIAFNMRPVTDFNEITYHFLEVVYCNSHNASRAATAGAAPATAAMG 187
Query: 185 SSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSE 244
+A + + P S + + P E GV V+++
Sbjct: 188 GDSAYAAPSAGAPAAAMPAAGGSA---------NDQVFAIFNGP-QGHGESGVRVDDVVT 237
Query: 245 QL--KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
QL + + ++ +S+ L NEG +YSTID+ H+K
Sbjct: 238 QLNGRFTEAQVRESVEHLVNEGHLYSTIDDDHFK 271
>gi|308810557|ref|XP_003082587.1| Single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit (ISS) [Ostreococcus tauri]
gi|116061056|emb|CAL56444.1| Single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit (ISS) [Ostreococcus tauri]
Length = 262
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 146/285 (51%), Gaps = 41/285 (14%)
Query: 3 SSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMIS---EASHSGDD 59
S++QF + + G +P S P ++ ++ + + PVTVKMI +A S DD
Sbjct: 6 SATQFAGATGYMG------EPDASGMKPRASGGNQPNT-MTPVTVKMIKGALDARASPDD 58
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTR-EMEAI 118
+ +NG+ I N+TLVG V + + + S V + LDD TG+ K W D+ +E I
Sbjct: 59 E--IKVNGMAIMNITLVGKVVDVQTKGSQVVYRLDDSTGQTDVKVW----LDSDGPVEEI 112
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAF----SVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG 174
G YVR+ G K+ G Q++A S+R +T+F+E+T H +E IY +K + G
Sbjct: 113 PRGAYVRVYGTPKAV-GADQVIAAHTTESIRVITDFNEITYHLLEVIYASGYAAKVKSGG 171
Query: 175 FPSS-QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSER 233
+ PQ V S++ Q AP N+++ ++G CD+++ P+
Sbjct: 172 GATGVAPQSVYSAV-----------QAAP-NVAADGDMNG-SLCDRVLFIVKNNPNG--- 215
Query: 234 ERGVHVNELSEQL--KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ G+ V E+ E+L + + + SL N+G +Y+T+DE HY+
Sbjct: 216 DTGISVLEVVEKLGGQFTDAAVRQELESLSNDGAVYTTVDEDHYQ 260
>gi|302895389|ref|XP_003046575.1| hypothetical protein NECHADRAFT_103427 [Nectria haematococca mpVI
77-13-4]
gi|256727502|gb|EEU40862.1| hypothetical protein NECHADRAFT_103427 [Nectria haematococca mpVI
77-13-4]
Length = 274
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 11/238 (4%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
+S + L PVT+K I +A + ++F I+G IT +T VG + + + +++ F +D
Sbjct: 40 QSYQDESLRPVTIKQILDAEEAFQ-GADFKIDGSLITQITFVGQIRSVTPQPTNITFKID 98
Query: 95 DGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
DGTG++ K+W D + +VR+ G LKSF K+ + A +RPV +F+EV+
Sbjct: 99 DGTGQIEVKKWVDA--DNNNEPEFELDSHVRVWGRLKSFNSKRHVGAHVIRPVEDFNEVS 156
Query: 155 CHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGL 214
H +E Y HL +K + G + + ++ +G AP+ LS G GL
Sbjct: 157 YHMLEATYVHLYFTKGPLGGQGPANGEGDSMFVDGGGYNDQAGGNAAPSKLS---GCSGL 213
Query: 215 KDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+M P +E GVH+N ++ + + ++ + L +GLIY+T+D+
Sbjct: 214 --AKKMFSFMNDAPGGNE---GVHINGITSSTGLSVRDVLTAADELLGQGLIYTTVDD 266
>gi|148231915|ref|NP_001090609.1| uncharacterized protein LOC100036853 [Xenopus laevis]
gi|120538242|gb|AAI29536.1| LOC100036853 protein [Xenopus laevis]
Length = 274
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 134/277 (48%), Gaps = 35/277 (12%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q +RSR SQ +VP TV + A+ + F I E++ V
Sbjct: 22 SPGGFGSPAPTQG----EKKSRSR-SQQIVPCTVSQLLSATQ---NDEVFRIGETELSQV 73
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
+VG+V + E+ +++ + +DD T + ++W + E + G YV++ G+L+S
Sbjct: 74 IIVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEASCENMVVPPGSYVKVAGHLRS 133
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHL-QNSKSQVQGFPSSQPQMVDSSLNTSA 191
FQ KK +VAF + PV + +E H +E ++ H+ NS QG PS + +LNT
Sbjct: 134 FQNKKSVVAFKIAPVDDMNEFVSHMLEVVHSHMVMNS----QGAPSGGGSTM--ALNTPG 187
Query: 192 RTGL-------SGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSE 244
R G+ SG PTN GL IL+ ++ S + G+ EL
Sbjct: 188 RMGIGDSGGAFSGGNDNPTN--------GLTPHQNQILNLIK---SCKGNEGMAFEELKN 236
Query: 245 QLK-IPQKKIMDSIASLENEGLIYSTIDEFHYKFARG 280
+L + I ++ L NEG IYSTID+ HYK G
Sbjct: 237 RLHGMNVNSIRKTVDFLSNEGHIYSTIDDEHYKSTDG 273
>gi|301755100|ref|XP_002913372.1| PREDICTED: replication protein A 32 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 270
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 24/265 (9%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPTPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDE---MFKIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + LDD T + ++W + E + YV++ G+L+S
Sbjct: 75 TVVGIIRHAEKAPTNIVYKLDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQ KK +VAF + P+ + +E T H +E + H+ SKS Q P+ + + + + +A
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMTLSKSNSQP-PAGRAPISNPGMGETAN 193
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQK 251
G G + P N GL +L+ ++ + R G++ +L QL+ +
Sbjct: 194 FG--GNSSMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLQHMTVA 240
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
I ++ L NEG IYST+D+ H+K
Sbjct: 241 SIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|358384700|gb|EHK22297.1| hypothetical protein TRIVIDRAFT_84151 [Trichoderma virens Gv29-8]
Length = 276
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 14/241 (5%)
Query: 35 RSRDSQGLVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFT 92
+S + L P+T+K I +E +SG D F ++G IT +T VG V + + +++
Sbjct: 39 KSYQDESLRPLTIKQILDAEEPYSGAD---FKVDGAPITQITFVGQVLSINPQQTNLTIK 95
Query: 93 LDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
+DDGTG++ K+W + + G ++R+ G LKSF K+ + A +RPVT+F+E
Sbjct: 96 VDDGTGQIDVKKWIDADKQSDAEPGFELGSHIRVWGRLKSFSNKRHVGAHVIRPVTDFNE 155
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD 212
V H +E Y HL ++ V G + P DS G GY +
Sbjct: 156 VNYHLLEATYVHLFYTRGAV-GDSGAGPNNSDSMF----VDGGDGYNAGNGGAQLPSKLS 210
Query: 213 GLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTID 271
G + + +YL + P ++ G+H+N ++ L + + ++ + L G+IY+T+D
Sbjct: 211 GCSGNAKRVYNYLNETPGGND---GMHLNNITGALGLAVRDVLTAADELLGLGIIYTTVD 267
Query: 272 E 272
+
Sbjct: 268 D 268
>gi|409082265|gb|EKM82623.1| hypothetical protein AGABI1DRAFT_111214 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 275
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 131/256 (51%), Gaps = 18/256 (7%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
S RS + L P+ +A +D + ++++G E+ VT+VG + + + ++
Sbjct: 31 SGQQRSEAASSLRPINSFQYRKAEQPHND-APWVLDGFEVGLVTMVGHLVSMHLQTTNHV 89
Query: 91 FTLDDGTGRVVCKRW-ASEVFDTREMEA---IQDGMYVRLIGNLKSFQGKKQIVAFSVRP 146
+TL+DG GRV + W S +EME I++G+YVRL G LKSF GKK I A +RP
Sbjct: 90 YTLEDGLGRVEARHWVGSSTNAEQEMEKWGDIKEGIYVRLTGFLKSFGGKKYINATYMRP 149
Query: 147 VTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLS 206
VT+F E+ H++ECI L + F + Q Q N + S YQ ++
Sbjct: 150 VTDFSEIDFHFLECITVTLTLERGPHYNFGTGQQQ------NATGVKSSSAYQL-DNSMD 202
Query: 207 SQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQK---KIMDSIASLENE 263
+ L +Q I+ YL S +++ GVHV ++ + + K+ ++ SL +
Sbjct: 203 IRDEYSHLPPLEQQIIRYL---ISQDQKDGVHVANIARAIGKSDEDADKLSTAMDSLMDN 259
Query: 264 GLIYSTIDEFHYKFAR 279
G +++TID+ H+ +R
Sbjct: 260 GHLFNTIDDCHFAVSR 275
>gi|229367182|gb|ACQ58571.1| Replication protein A 32 kDa subunit [Anoplopoma fimbria]
Length = 275
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 140/281 (49%), Gaps = 41/281 (14%)
Query: 14 SGGGFMPSQPPQSADYPSST------ARSRDSQGLVPVTVKMISEASHSGDDKSNFMING 67
+GGG+ +Q P P+++ R+R SQ ++P TV + AS + + F +
Sbjct: 12 TGGGY--TQSPGGFASPAASQGGEKKGRTRASQ-IIPCTVSQLMSASQADE---AFKVGE 65
Query: 68 LEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRL 126
+E+ VT+VG++ + ++ +++ + +DD TG + K+W + + + G YV++
Sbjct: 66 VEVAQVTIVGIIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPSVDSTVLPLGTYVKV 125
Query: 127 IGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ-----GF-----P 176
GNL+SFQ + +VAF VRP+ + +E+T H +E + L SK Q G P
Sbjct: 126 SGNLRSFQNHRSVVAFGVRPLEDMNEITSHMLEVVQARLALSKPQTMLSAGGGMSSDVTP 185
Query: 177 SSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERG 236
S+P M +R G Y A S G +GL +L ++ +G
Sbjct: 186 ISRPAM-------ESRGG--SYAGA-----SDMGNNGLSANQNQVLSLIR---GCPDPQG 228
Query: 237 VHVNELSEQLKIPQKKIMD-SIASLENEGLIYSTIDEFHYK 276
+ + +L ++L + ++ ++ L NEG I+STIDE HYK
Sbjct: 229 ISIQDLKQRLSVMSMAVIKQAVEFLSNEGHIFSTIDEDHYK 269
>gi|449295672|gb|EMC91693.1| hypothetical protein BAUCODRAFT_79701 [Baudoinia compniacensis UAMH
10762]
Length = 255
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 21/256 (8%)
Query: 25 QSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEE 84
QS D P+S RS L PVT+K + +A+H D F+I+G E T VT VG + N
Sbjct: 5 QSNDSPNSK-RSYGKDTLRPVTIKQLQDATHPHPDAEYFIIDGAEATQVTFVGQIRNIST 63
Query: 85 RASDVNFTLDDGTGRVVCKRWA-SEVFDTREMEAIQ-----DGMYVRLIGNLKSFQGKKQ 138
+ ++V + +DDGTG + K W +E F+ E +A+ + Y R+ G LK+F K+
Sbjct: 64 QTTNVTYRMDDGTGTMEVKVWIDAEEFNGEENQAVAKPKPVEQGYARVWGRLKAFNNKRH 123
Query: 139 IVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGY 198
+ A +RP+ +F+E+ H +E HL ++ + + Q + + N A
Sbjct: 124 VGANIIRPLQDFNEIQYHLLEATAVHLFFTRGPPESATAQQSKTGGAQANGMA------- 176
Query: 199 QTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSS--ERERGVHVNELSEQLKIPQKKIMDS 256
N + G +GL + Q S+ + GVHV +++ + +++ +
Sbjct: 177 -----NGHAAVGGEGLPAGTSQATKKVYQLISTLPQGHEGVHVQQIAMAGNMEVSEVLKA 231
Query: 257 IASLENEGLIYSTIDE 272
L G IYST++E
Sbjct: 232 TDDLNGMGKIYSTVNE 247
>gi|426221856|ref|XP_004005122.1| PREDICTED: replication protein A 32 kDa subunit [Ovis aries]
Length = 270
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 34/283 (12%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+S+S F + + S GGF P S S AR+ Q +VP T+ + A+ +
Sbjct: 9 YSTSSFGGTGGYTQSPGGF--GSPTASQAEKKSRARA---QHIVPCTISQLLSATLVDEV 63
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ N E+ A+++ + +DD T + ++W + E +
Sbjct: 64 ---FRIGNVEISQVTIVGIIRNAEKAATNIVYKIDDMTAAPMDVRQWVDTDDASGENTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG---- 174
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SKS Q
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMMLSKSNSQPSAGR 180
Query: 175 FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERE 234
P S P M ++ G P N GL +L+ ++ + R
Sbjct: 181 APISNPGMGEAG-------NFGGNNFTPAN--------GLTVAQNQVLNLIK---ACPRP 222
Query: 235 RGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
G++ +L QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 223 EGLNFQDLKNQLQHMSVASIKLAVDFLSNEGHIYSTVDDDHFK 265
>gi|395854820|ref|XP_003799877.1| PREDICTED: replication protein A 32 kDa subunit isoform 1 [Otolemur
garnettii]
Length = 271
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 21 SQPPQSADYPSSTARSRDS----QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLV 76
+Q P P+ST R S Q +VP T+ + A+ + F I +EI+ V +V
Sbjct: 22 TQSPGGFGSPTSTQSERKSRARAQHIVPCTISQLLSATLVDE---VFKIGNVEISQVIIV 78
Query: 77 GLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQG 135
G++ + E+ +++ + +DD T + ++W E + YV++ G+L+SFQ
Sbjct: 79 GIIRHTEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTGSENTVVPPETYVKVAGHLRSFQN 138
Query: 136 KKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGL 195
KK +VAF + P+ + +E T H +E + H+ SK+ Q P P S+ S
Sbjct: 139 KKSLVAFKIMPLEDMNEFTAHILEVVNAHMTLSKANSQPPPGRVPI---SNPGMSEAGSF 195
Query: 196 SGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIM 254
G P N GL +L+ ++ + R G++ +L QLK +P I
Sbjct: 196 GGTSFMPAN--------GLTAAQNQVLNLIK---ACPRPEGLNFYDLKNQLKHMPVASIK 244
Query: 255 DSIASLENEGLIYSTIDEFHYK 276
++ L NEG IYST+D+ H+K
Sbjct: 245 QAVDFLSNEGHIYSTVDDDHFK 266
>gi|407926600|gb|EKG19567.1| Nucleic acid binding OB-fold tRNA/helicase-type [Macrophomina
phaseolina MS6]
Length = 273
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 127/255 (49%), Gaps = 25/255 (9%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P S ++ L PVT+K I++A ++ +S+F I+G EIT +T +G + N ++ +++
Sbjct: 34 PGSASKGYRKDTLRPVTLKQINDAVNT--QESDFTIDGAEITQITFIGQIRNISQQTTNI 91
Query: 90 NFTLDDGTGRVVCKRWAS-------EVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAF 142
F LDDGTG K W E D + +++ Y R+ G LKS+ K+ ++A
Sbjct: 92 TFKLDDGTGIAEVKLWIDSDAPNPLEPADGSKPTLVENA-YARVWGKLKSYGNKRHVIAH 150
Query: 143 SVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAP 202
+RP+T+F+E++ H +E HL ++ + S+P + G +G + P
Sbjct: 151 IIRPITDFNEISYHLLEATVVHLHFTRGPLNS--DSKPAANGGDVQMGGYGGNAG--SVP 206
Query: 203 TNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLEN 262
N+SS +L+ L+ ++ + G+H+ +++ + + + + L
Sbjct: 207 ANISSGAA---------KVLNVLR--TAPQGNEGLHMQDIASRTGMDMADVAKAGDELLT 255
Query: 263 EGLIYSTIDEFHYKF 277
EG IY+T+D+ +
Sbjct: 256 EGRIYTTVDDTTWAL 270
>gi|51036584|ref|NP_067593.1| replication protein A 32 kDa subunit [Rattus norvegicus]
gi|62906848|sp|Q63528.2|RFA2_RAT RecName: Full=Replication protein A 32 kDa subunit; Short=RP-A p32;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2
gi|50925757|gb|AAH79180.1| Replication protein A2 [Rattus norvegicus]
gi|149024153|gb|EDL80650.1| replication protein A2 [Rattus norvegicus]
Length = 270
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 24/265 (9%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + + F I +EI+ V
Sbjct: 23 SPGGFGSPTPSQA----EKKSRAR-AQHIVPCTISQLLSATLTDE---VFKIGDVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 75 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQ KK +VAF + P+ + +E T H +E + HL SK+ Q +P M + +
Sbjct: 135 FQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHLMLSKANSQA-SVGRPSMSNPGMGEPGN 193
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQK 251
SG P N GL +L+ ++ + R G++ +L QL+ +P
Sbjct: 194 --FSGNNFMPAN--------GLTVVQNQVLNLIK---ACPRPEGLNFQDLRSQLQHMPVA 240
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
I ++ L NEG IYST+D+ H+K
Sbjct: 241 SIKQAVDFLCNEGHIYSTVDDDHFK 265
>gi|114051646|ref|NP_001039449.1| replication protein A 32 kDa subunit [Bos taurus]
gi|86438509|gb|AAI12730.1| Replication protein A2, 32kDa [Bos taurus]
gi|296489970|tpg|DAA32083.1| TPA: replication protein A2, 32kDa [Bos taurus]
Length = 270
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 34/283 (12%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+S+S F + + S GGF P S S AR+ Q +VP T+ + A+ +
Sbjct: 9 YSTSSFGGAGGYTQSPGGF--GSPTASQAEKKSRARA---QHIVPCTISQLLSATLVDEV 63
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ N E+ A+++ + +DD T + ++W + E +
Sbjct: 64 ---FRIGNVEISQVTIVGIIRNAEKAATNIVYKIDDMTAAPMDVRQWVDTDDASSENTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG---- 174
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SKS Q
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTTHILEVVNAHMMLSKSNSQPSAGR 180
Query: 175 FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERE 234
P S P M ++ G P N GL +L+ ++ + R
Sbjct: 181 APISNPGMGEAG-------NFGGNNFIPAN--------GLTVAQNQVLNLIK---ACPRP 222
Query: 235 RGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
G++ +L QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 223 EGLNFQDLKNQLQHMSVASIKLAVDFLSNEGHIYSTVDDDHFK 265
>gi|340383369|ref|XP_003390190.1| PREDICTED: replication protein A 32 kDa subunit-like [Amphimedon
queenslandica]
Length = 324
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 147/301 (48%), Gaps = 43/301 (14%)
Query: 11 NAFSGGGFMPSQ---PPQSADYPSSTARSRDS-------QGLVPVTVKMISEASHSGDDK 60
+ F GGG+M ++ S + T +DS Q PVT M+ + +
Sbjct: 27 DTFGGGGYMANEMGGGFTSPGGTTGTPGGKDSKRGGFKNQATRPVTAAMLHRVTSPPGAE 86
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTR-EME-- 116
++I+ ++ + LVG + E A+ V + +DD TG V +RW + D++ E+E
Sbjct: 87 EIYLIDDEQVNQIVLVGEIVEVFESATSVMYKIDDRTGPPVEVRRWINAEEDSQFELERR 146
Query: 117 -AIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK------ 169
A ++G+YV+++G++K F ++ I F +RP+ +F+EVT H E ++ HL +K
Sbjct: 147 AACREGIYVKIVGHIKMFNNQRTITGFMIRPIEDFNEVTHHMAETMFAHLAITKGLKLPE 206
Query: 170 --------SQVQG---FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCD 218
+Q+ G F S+ PQ S A + Q + T+ +QF GL
Sbjct: 207 QFSDHQQGNQMGGASSFGSTTPQAGGSGWTPLA----TSTQMSGTSYGNQFN-SGLTLVQ 261
Query: 219 QMILDYLQQPSSSERERGVHVNELSEQLK---IPQKKIMDSIASLENEGLIYSTIDEFHY 275
Q +L + +++ + G+HVN++ +K I ++ L NEG +YSTIDE H+
Sbjct: 262 QKVLSVI---GNTKGDHGLHVNDIISSVKTQGFSDASIKTALDFLSNEGHVYSTIDEQHF 318
Query: 276 K 276
K
Sbjct: 319 K 319
>gi|242083306|ref|XP_002442078.1| hypothetical protein SORBIDRAFT_08g009560 [Sorghum bicolor]
gi|241942771|gb|EES15916.1| hypothetical protein SORBIDRAFT_08g009560 [Sorghum bicolor]
Length = 163
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%)
Query: 70 ITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGN 129
++ V LVG + N+ + DV FTL DG G++ RW +E D +EM + DG YV + G
Sbjct: 11 LSKVRLVGRMLNEVQHVRDVQFTLHDGAGKIDVNRWENESSDAKEMADVNDGDYVIVNGG 70
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
LK FQGK+ IVA+SVR VT+F+E+ H++ CI HL +++ + Q
Sbjct: 71 LKGFQGKRHIVAYSVRRVTDFNEIPHHFLHCIQVHLDHTRPKAQ 114
>gi|310795122|gb|EFQ30583.1| hypothetical protein GLRG_05727 [Glomerella graminicola M1.001]
Length = 281
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 121/246 (49%), Gaps = 10/246 (4%)
Query: 31 SSTARSRDSQGLVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASD 88
+ ++ + L PVT+K I +E ++ G D F I+G+ +T VT V + + ++
Sbjct: 34 GAGGKAYSEESLRPVTIKQIIDAEEAYPGAD---FKIDGVTVTQVTFVAQIRQISPQPTN 90
Query: 89 VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
+ LDDGTG + K+W ++ +VR+ G LKSF GK+ + A +RPVT
Sbjct: 91 ITLKLDDGTGLIEVKKWVDTDKKDDADANLELEGHVRVWGRLKSFNGKRHVGAHFIRPVT 150
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
+FDEV H +E Y HL +K + G P D + +G S+Q
Sbjct: 151 DFDEVNYHLLEATYVHLYFAKGPLNGAPGGAAAGGDGMFVDGGDSYGAGAGAPTGGNSAQ 210
Query: 209 FG-VDGLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLI 266
G + G Q + +++ P +E GVH+N++S + + ++ + L +GLI
Sbjct: 211 AGKLRGCSAAAQKMFNFINNYPGGNE---GVHLNQISSGAGLSVRDVIGASDELLGQGLI 267
Query: 267 YSTIDE 272
Y+TID+
Sbjct: 268 YTTIDD 273
>gi|296472882|tpg|DAA14997.1| TPA: replication protein A2, 32kDa-like [Bos taurus]
Length = 270
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 34/283 (12%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+S+S F + + S GGF S Q+ +R+R +Q +VP T+ + A+ +
Sbjct: 9 YSTSSFGGAGGYTQSPGGFGSSTASQA----KKKSRAR-AQHIVPCTISQLLSATLVDEI 63
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ N E+ A+++ + +DD T + ++W + E +
Sbjct: 64 ---FRIGNVEISRVTIVGIIRNAEKPATNIVYKIDDMTTVPMDVRQWVDTDDASSENTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG---- 174
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SKS Q
Sbjct: 121 PPEAYVKVAGHLRSFQNKKSLVAFKIMPLEHMNEFTTHILEVVNAHMMLSKSNSQPSAGR 180
Query: 175 FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERE 234
P S+P M ++ G P N GL +L+ ++ + R
Sbjct: 181 APISKPGMGEAG-------NFGGNNFIPAN--------GLTVAQNQVLNLIK---ACPRP 222
Query: 235 RGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
G++ +L QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 223 EGLNFQDLKNQLQHMSVASIKLAVDFLSNEGHIYSTVDDDHFK 265
>gi|343887034|gb|AEM65193.1| replication protein A 32kDa subunit [Kryptolebias marmoratus]
Length = 274
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 36/275 (13%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P ++ R+R +Q ++P TV + AS + + F + +E++ +
Sbjct: 18 SPGGFAS---PSASQGGEKKGRTRATQ-IIPCTVSQLMSASQADE---AFRVGDVEVSQI 70
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + ++ +++ + +DD TG + K+W + + G YVR+ GNL+S
Sbjct: 71 TIVGIIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDLEDPGVDSTVLPPGTYVRVSGNLRS 130
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQG------FPSSQPQM 182
FQ + +VAFSVRP+ + +E+T H +E + H+ KSQ V G P S+P +
Sbjct: 131 FQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHMVLGKSQSTPGVDGGMSGRVTPVSRPAL 190
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
+ N + ++ Y GL +L ++ +G+ + +L
Sbjct: 191 TVTGDNYPGVSPVALY--------------GLNANQNQVLSLIR---GCPDPQGISIQDL 233
Query: 243 SEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++L I I ++ L NEG I+STIDE HYK
Sbjct: 234 KQRLSGINLSIIKQAVEFLSNEGHIFSTIDEDHYK 268
>gi|392595805|gb|EIW85128.1| replication protein A subunit RPA32 [Coniophora puteana RWD-64-598
SS2]
Length = 270
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 19/273 (6%)
Query: 15 GGGFMPSQPP--QSADYPSSTARSRD-SQGLVPVTVKMISEASHSGDDKSNFMINGLEIT 71
GGG++ P +A P R D S L P+T+ + A+ + D + +M+ EI
Sbjct: 8 GGGYLTGGSPYGSAAGSPGGAGRRSDVSHSLRPLTIFQLLNATQAHSD-AEWMLEDTEIG 66
Query: 72 NVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVF--DTREMEAIQDGMYVRLIGN 129
+VT V V + + +A++ + LDDGTG + + W D + I++G YVR++GN
Sbjct: 67 HVTCVAHVVSVQNQATNNVYGLDDGTGHIEARHWTDSSLEEDVDKGAGIKEGTYVRVLGN 126
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNT 189
LK F K+ I +RP + DE+ H +E + L + G P Q ++
Sbjct: 127 LKMFGSKRYINVNHIRPAKSADEIYFHLLEVMTVTLMWER----GSPLRPGQQASETVG- 181
Query: 190 SARTGLSGY--QTAPTNLSSQFGVDGLKDCDQMILDY-LQQPSSSERERGVHVNELSEQL 246
S S Y Q+ ++SQ+ L + ++ IL + + QP++ E GV+ + L
Sbjct: 182 SHSVAQSDYTAQSHGGAINSQWA--HLPELNRNILQFIINQPAT---EEGVNSAAILRAL 236
Query: 247 KIPQKKIMDSIASLENEGLIYSTIDEFHYKFAR 279
K + +I L ++GLIY+TIDE H++ +
Sbjct: 237 KATALALDQAIEQLMDDGLIYTTIDESHFRLVQ 269
>gi|307110266|gb|EFN58502.1| hypothetical protein CHLNCDRAFT_140549 [Chlorella variabilis]
Length = 277
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 123/244 (50%), Gaps = 12/244 (4%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
Q L +T+K + +A+ + D + +++G EITNVTLVG V + E +DDGTG+
Sbjct: 35 QTLRALTIKQLHDANSTRQDDT-LLLDGKEITNVTLVGKVLSTSESGLTFGLKIDDGTGK 93
Query: 100 VVCKRWASEVFDTREMEA-----IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
K W SE D E+E + GMYVR+ G++ +F + ++AF++R VT+ +EVT
Sbjct: 94 ADVKIWISE--DDSELEKQRRAEWRAGMYVRVHGHISNFGRTQDVLAFNIRTVTDHNEVT 151
Query: 155 CHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGL 214
H+++CI+ H+ +K ++ + AP G GL
Sbjct: 152 YHFLQCIFQHVHLTKGGGDQAGAAAAPAPAAQGAYGGAAPAVAGYAAPAAAGYNPG--GL 209
Query: 215 KDCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQKKIMDSIASLENEGLIYSTIDE 272
++ P + + G+ ++ + + + ++ +++ +L+NEG +YSTIDE
Sbjct: 210 TAIQSDLMTLFNAPDAQASDAGISIDAVLSRSGGRYSLVQVREAVEALQNEGHLYSTIDE 269
Query: 273 FHYK 276
H+K
Sbjct: 270 HHFK 273
>gi|189066545|dbj|BAG35795.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPAPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 75 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E I H+ SK+ Q P S P M +S
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSESG-- 192
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G P N GL +L+ ++ + R G++ +L QLK
Sbjct: 193 -----NFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKH 236
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ I ++ L NEG IYST+D+ H+K
Sbjct: 237 MSVSSIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|354472349|ref|XP_003498402.1| PREDICTED: replication protein A 32 kDa subunit-like [Cricetulus
griseus]
Length = 320
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 124/240 (51%), Gaps = 19/240 (7%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
SQ +VP T+ + A+ + + F I +EI+ VT+VG++ + E+ +++ + +DD T
Sbjct: 93 SQHIVPCTISQLLSATLTDE---VFKIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 149
Query: 99 RVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
+ ++W + E + YV++ G+L+SFQ KK +VAF + P+ + +E T H
Sbjct: 150 APMDVRQWVDTDDASGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHI 209
Query: 158 IECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDC 217
+E + H+ SKS Q + +P + +S + SG P N GL
Sbjct: 210 LEVVNSHMMLSKSNNQ-LSTGRPSISNSGMGEPG--NFSGNNLMPAN--------GLTVV 258
Query: 218 DQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L+ ++ + R G++ +L QL+ +P I ++ L NEG IYST+D+ H+K
Sbjct: 259 QNQVLNLIK---ACPRPEGLNFQDLRNQLQHMPVASIKQAVDFLCNEGHIYSTVDDDHFK 315
>gi|348571074|ref|XP_003471321.1| PREDICTED: replication protein A 32 kDa subunit-like [Cavia
porcellus]
Length = 270
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 30/266 (11%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTL 75
GGF P S S ARS Q +VP T+ + A+ + F I +EI+ V +
Sbjct: 25 GGF--GSPTASQAEKKSRARS---QNIVPCTISQLLSATLVDEV---FKIGNVEISQVII 76
Query: 76 VGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQ 134
VG++ + E+ +++ + +DD T + ++W E + YV++ G+L+SFQ
Sbjct: 77 VGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTGGENTVVPPETYVKVAGHLRSFQ 136
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTG 194
KK +VAF + P+ + +E T H +E + H+ SK PS+QP +SL+
Sbjct: 137 NKKSLVAFKIMPLEDMNEFTTHILEVVNAHMMLSK------PSTQPSAGRASLSNPGMGE 190
Query: 195 L---SGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQ 250
+ G PTN GL +L+ ++ + R G++ +L QL+ +P
Sbjct: 191 MGNFGGNSFTPTN--------GLNVTQNQVLNLIK---ACPRPEGLNFQDLRNQLQHMPL 239
Query: 251 KKIMDSIASLENEGLIYSTIDEFHYK 276
I + L NEG IYST+D+ H+K
Sbjct: 240 ATIKQVVDFLSNEGHIYSTVDDDHFK 265
>gi|397515792|ref|XP_003828127.1| PREDICTED: replication protein A 32 kDa subunit [Pan paniscus]
Length = 270
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPAPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 75 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E I H+ SK+ Q P S P M ++
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAG-- 192
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G P N GL +L+ ++ + R G++ +L QLK
Sbjct: 193 -----NFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKH 236
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ I ++ L NEG IYST+D+ H+K
Sbjct: 237 MSVSSIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|332808182|ref|XP_003307967.1| PREDICTED: replication protein A 32 kDa subunit isoform 1 [Pan
troglodytes]
gi|410250836|gb|JAA13385.1| replication protein A2, 32kDa [Pan troglodytes]
gi|410330465|gb|JAA34179.1| replication protein A2, 32kDa [Pan troglodytes]
Length = 269
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 22 SPGGFGSPAPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 73
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 74 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRS 133
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E I H+ SK+ Q P S P M ++
Sbjct: 134 FQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAG-- 191
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G P N GL +L+ ++ + R G++ +L QLK
Sbjct: 192 -----NFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKH 235
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ I ++ L NEG IYST+D+ H+K
Sbjct: 236 MSVSSIKQAVDFLSNEGHIYSTVDDDHFK 264
>gi|406865248|gb|EKD18290.1| putative replication protein A 32 kDa subunit [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 330
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 122/238 (51%), Gaps = 22/238 (9%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K I +A D S+F I+G E+T +T +G + +A++ + LDDGTG +
Sbjct: 100 LRPVTIKQIIDAQQPHPD-SDFKIDGSEVTQLTFIGQINQISSQATNTTYKLDDGTGLIE 158
Query: 102 CKRWASEVFDTREMEAI-QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
K+W D + ++G Y+R+ G LK+F K+ + A +RPV +F+EV+ H +E
Sbjct: 159 VKQWVDSDADPDAAKDFPKEGEYLRVWGRLKAFNNKRHVGAHMIRPVKDFNEVSYHLLEA 218
Query: 161 IYFHLQNSKS--QVQGFPS--SQPQMVDSSLNTSARTGLSGYQTA--PTNLSSQFGVDGL 214
HL ++ ++ G S VDS+ + G G QT P ++S
Sbjct: 219 TAVHLYFTRGPPELNGVKSEGGNGMFVDSN---AGANGAMGGQTKKLPPKMTS------- 268
Query: 215 KDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ + + L+ +S + G+HV+ ++ QL + ++ + L EG IY+T+D+
Sbjct: 269 --IAKRVYEVLK--NSPQNNEGMHVHLIASQLGVNPNEVFKAGDELLGEGAIYTTVDD 322
>gi|4506585|ref|NP_002937.1| replication protein A 32 kDa subunit [Homo sapiens]
gi|402853597|ref|XP_003891479.1| PREDICTED: replication protein A 32 kDa subunit [Papio anubis]
gi|402910515|ref|XP_003917920.1| PREDICTED: replication protein A 32 kDa subunit-like [Papio anubis]
gi|132474|sp|P15927.1|RFA2_HUMAN RecName: Full=Replication protein A 32 kDa subunit; Short=RP-A p32;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2; AltName: Full=Replication protein A 34 kDa
subunit; Short=RP-A p34
gi|158429426|pdb|2PI2|A Chain A, Full-Length Replication Protein A Subunits Rpa14 And Rpa32
gi|158429427|pdb|2PI2|B Chain B, Full-Length Replication Protein A Subunits Rpa14 And Rpa32
gi|158429428|pdb|2PI2|C Chain C, Full-Length Replication Protein A Subunits Rpa14 And Rpa32
gi|158429429|pdb|2PI2|D Chain D, Full-Length Replication Protein A Subunits Rpa14 And Rpa32
gi|161761149|pdb|2Z6K|A Chain A, Crystal Structure Of Full-Length Human Rpa1432 HETERODIMER
gi|161761150|pdb|2Z6K|B Chain B, Crystal Structure Of Full-Length Human Rpa1432 HETERODIMER
gi|337350|gb|AAA36560.1| replication protein A [Homo sapiens]
gi|12804447|gb|AAH01630.1| Replication protein A2, 32kDa [Homo sapiens]
gi|15082484|gb|AAH12157.1| Replication protein A2, 32kDa [Homo sapiens]
gi|18204222|gb|AAH21257.1| Replication protein A2, 32kDa [Homo sapiens]
gi|47496643|emb|CAG29344.1| RPA2 [Homo sapiens]
gi|62511903|gb|AAX84514.1| replication protein A2, 32kDa [Homo sapiens]
gi|119628129|gb|EAX07724.1| replication protein A2, 32kDa [Homo sapiens]
gi|123983074|gb|ABM83278.1| replication protein A2, 32kDa [synthetic construct]
gi|123998291|gb|ABM86747.1| replication protein A2, 32kDa [synthetic construct]
gi|261861606|dbj|BAI47325.1| replication protein A2, 32kDa [synthetic construct]
Length = 270
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPAPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 75 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E I H+ SK+ Q P S P M ++
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAG-- 192
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G P N GL +L+ ++ + R G++ +L QLK
Sbjct: 193 -----NFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKH 236
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ I ++ L NEG IYST+D+ H+K
Sbjct: 237 MSVSSIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|2498846|sp|Q62193.1|RFA2_MOUSE RecName: Full=Replication protein A 32 kDa subunit; Short=RP-A p32;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2; AltName: Full=Replication protein A 34 kDa
subunit; Short=RP-A p34
gi|220584|dbj|BAA00693.1| 30-kDa subunit of replication protein A [Mus musculus]
Length = 270
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 139/279 (49%), Gaps = 26/279 (9%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
F+SS + + S GGF P Q+ +R R +Q +VP T+ + A+ + +
Sbjct: 9 FTSSTYGGRGGYTQSPGGFGSPTPSQA----EKKSRVR-AQHIVPCTISQLLSATLTDE- 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 63 --VFRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASGENAVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SK Q +
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHILEVVNSHMMLSKPNSQA-SAG 179
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+P M + ++ S SG P N L +L+ ++ + R G++
Sbjct: 180 RPSMSNPGMSESF--NFSGNNFMPANR--------LTVVQNQVLNLIK---ACPRPEGLN 226
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L QL+ +P I ++ L NEG IYST+D+ H+K
Sbjct: 227 FQDLRSQLQHMPVPSIKQAVDFLCNEGHIYSTVDDDHFK 265
>gi|332245173|ref|XP_003271737.1| PREDICTED: replication protein A 32 kDa subunit [Nomascus
leucogenys]
gi|426328575|ref|XP_004025327.1| PREDICTED: replication protein A 32 kDa subunit [Gorilla gorilla
gorilla]
Length = 270
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPAPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 75 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E I H+ SK+ Q P S P M ++
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAG-- 192
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G P N GL +L+ ++ + R G++ +L QLK
Sbjct: 193 -----NFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKH 236
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ I ++ L NEG IYST+D+ H+K
Sbjct: 237 MSVSSIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|440790733|gb|ELR12008.1| replication protein A2 family protein, putative [Acanthamoeba
castellanii str. Neff]
Length = 298
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 36/266 (13%)
Query: 28 DYPSSTARSRD-SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERA 86
D P S RS Q L PVTV+ + A+H+ D F ++ E+ +TLVG + N + ++
Sbjct: 44 DTPRSAKRSGAIVQTLTPVTVRQLHLATHTHPDDI-FKVDDRELNQITLVGQIVNLQVQS 102
Query: 87 SDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRP 146
++V +DDGTG++ + W + + G YVR+IGNL+SF + ++AF V P
Sbjct: 103 TNVELEVDDGTGKIGVRMWLDVEEENQSSRKWDVGSYVRVIGNLRSFMDTRSVLAFRVMP 162
Query: 147 VTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP-----------------QMVDSSLNT 189
+ +DEVT H+++ I+ HL +K ++ SS
Sbjct: 163 IEMYDEVTYHFLDVIHVHLAVTKGELDATDSSSAASGGRGTSGYGGAQRGGGGGGGYGRQ 222
Query: 190 SARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-- 247
+A G +G Q +P C + +L+ ++ S + G + E+ E L+
Sbjct: 223 AAPAGRAGGQFSP--------------CQKAVLEIIRT-SGRQSGAGCALGEVIEVLQTS 267
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEF 273
++++ ++I L EG +Y+ D+F
Sbjct: 268 FSEEELREAIEWLTAEGHLYTAGDDF 293
>gi|320581002|gb|EFW95224.1| Subunit of heterotrimeric Replication Protein A (RPA) [Ogataea
parapolymorpha DL-1]
Length = 253
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 128/248 (51%), Gaps = 27/248 (10%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
SS RS +Q L+PVT+K I++AS SG D F +GLE+ V VG++ +E AS
Sbjct: 27 SSQTRSAVTQSLIPVTIKEINDASQSGPDAP-FQTHGLELYYVAFVGII--RELDASQAQ 83
Query: 91 FTL---DDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPV 147
T+ +DGTG V ++W E + E ++ G YV+++ ++ F GKKQI +V+ +
Sbjct: 84 STMLKIEDGTGMVSVRKWNDE--EGNESDSFATGEYVKVVATIREFSGKKQIQTQTVQKI 141
Query: 148 TNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSS 207
+F+E+ H++ I +L NS S + G S+ DSSL +G
Sbjct: 142 QDFNEIPYHFLSAIKVYLDNSGSTIVGKHSTSANG-DSSLFVGNGSG------------- 187
Query: 208 QFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIY 267
DG + I +++Q+ S+ + GV + +++ I + IA+L ++G IY
Sbjct: 188 ----DGANSPLEKIFEFVQENSAVMTD-GVPLQLIAQNFNISIEDAESKIATLVDDGRIY 242
Query: 268 STIDEFHY 275
+ D+ ++
Sbjct: 243 NGSDDTNF 250
>gi|386781045|ref|NP_001247563.1| replication protein A 32 kDa subunit [Macaca mulatta]
gi|380815390|gb|AFE79569.1| replication protein A 32 kDa subunit [Macaca mulatta]
gi|383420569|gb|AFH33498.1| replication protein A 32 kDa subunit [Macaca mulatta]
gi|384948666|gb|AFI37938.1| replication protein A 32 kDa subunit [Macaca mulatta]
Length = 270
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPAPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 75 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E I H+ SK+ Q P S P M ++
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAG-- 192
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G P N GL +L+ ++ + R G++ +L QLK
Sbjct: 193 -----NFGGNSFLPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKH 236
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ I ++ L NEG IYST+D+ H+K
Sbjct: 237 MSVSSIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|156049217|ref|XP_001590575.1| hypothetical protein SS1G_08315 [Sclerotinia sclerotiorum 1980]
gi|154692714|gb|EDN92452.1| hypothetical protein SS1G_08315 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 287
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 130/251 (51%), Gaps = 18/251 (7%)
Query: 28 DYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERAS 87
D P T ++ L PVT+K I +A D ++F I+G E+T ++ +G V++ +A+
Sbjct: 41 DSPGGT-KTYGKDTLRPVTIKQILDAEQPHPD-ADFKIDGSEVTQLSFIGQVHSISTQAT 98
Query: 88 DVNFTLDDGTGRVVCKRWASEVFDTREMEAI-QDGMYVRLIGNLKSFQGKKQIVAFSVRP 146
+ + +DDGTG + K+W + +++ Q+G Y+ + G LKSF K+ + A +RP
Sbjct: 99 NNTYKVDDGTGLIEVKQWIDNDAEPENAKSVPQEGQYIHVWGRLKSFHDKRHVGAHIIRP 158
Query: 147 VTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLS 206
VT+ +EVT H +E HL ++ + P ++ T + G+ N+S
Sbjct: 159 VTDMNEVTFHGLEATLVHLHFTRGPI-------PTAGAGAVKTESGDGMFVDSYGGNNVS 211
Query: 207 SQFG----VDGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQKKIMDSIASLE 261
+ G + + + + LQ +P ++E G++VN ++ +L +P ++ L
Sbjct: 212 TATGGRVLAAHVTPNSRAVFNLLQLEPQNNE---GLNVNVIATKLGMPVAEVYKCGDQLL 268
Query: 262 NEGLIYSTIDE 272
+EG IY+T+D+
Sbjct: 269 SEGCIYTTVDD 279
>gi|426200096|gb|EKV50020.1| hypothetical protein AGABI2DRAFT_190434 [Agaricus bisporus var.
bisporus H97]
Length = 275
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 130/256 (50%), Gaps = 18/256 (7%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
S RS + L P+ +A +D + ++++G E+ VT+VG + + + ++
Sbjct: 31 SGQQRSEAASSLRPINSFQYRKAEQPHND-APWVLDGFEVGLVTMVGHLVSMHLQTTNHV 89
Query: 91 FTLDDGTGRVVCKRW-ASEVFDTREMEA---IQDGMYVRLIGNLKSFQGKKQIVAFSVRP 146
+TL+DG GRV + W S +EME I++G+YVRL G LKSF GKK I A +RP
Sbjct: 90 YTLEDGLGRVEARHWVGSSTNAEQEMEKWGDIKEGIYVRLTGFLKSFGGKKYINATYMRP 149
Query: 147 VTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLS 206
VT+F E+ H++ECI L + F Q Q N + S YQ ++
Sbjct: 150 VTDFSEIDFHFLECITVTLTLERGPHYNFGIGQQQ------NATGVKSSSAYQL-DNSMD 202
Query: 207 SQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQK---KIMDSIASLENE 263
+ L +Q I+ +L S +++ GVHV ++ + + K+ ++ SL +
Sbjct: 203 IRDEYSHLPPLEQQIIRFL---ISQDQKDGVHVATIARAIGKSDEDADKLSTAMDSLMDN 259
Query: 264 GLIYSTIDEFHYKFAR 279
G +++TID+ H+ +R
Sbjct: 260 GHLFNTIDDCHFAVSR 275
>gi|71894737|ref|NP_001026063.1| replication protein A 32 kDa subunit [Gallus gallus]
gi|53129873|emb|CAG31422.1| hypothetical protein RCJMB04_6d17 [Gallus gallus]
Length = 267
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 30/272 (11%)
Query: 16 GGFMP----SQPPQSADYPSSTA-----RSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
GG+ P +Q P P+ RSR SQ +VP TV + A + F I+
Sbjct: 10 GGYGPAGGYTQSPGGFSSPTGAQAEKKQRSR-SQSIVPCTVSQLLAAEQVDE---AFRIH 65
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVR 125
+EI+ VT+VG+V + E+ +++ + +DD T + ++W E + G YV+
Sbjct: 66 DVEISQVTVVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEAGSENIVVPPGTYVK 125
Query: 126 LIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDS 185
+ G+L+SFQ KK +VAF + P+ N +E T H +E + H+ K+ S PQ
Sbjct: 126 VAGHLRSFQNKKSLVAFKIMPLENMNEFTTHILETVNAHMILRKNLT--LASRAPQ---- 179
Query: 186 SLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQ 245
S ++ + + GY V+GL +L+ ++ S E G+ + EL Q
Sbjct: 180 SFTSAGMSDVGGYG------GGSLPVNGLTAHQSQVLNLIKNCHSPE---GMSLQELKLQ 230
Query: 246 L-KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
L + I ++ L +EG IYST+D+ HYK
Sbjct: 231 LHNVSIPTIKQAVEFLSSEGHIYSTVDDDHYK 262
>gi|281351626|gb|EFB27210.1| hypothetical protein PANDA_001185 [Ailuropoda melanoleuca]
Length = 231
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 127/244 (52%), Gaps = 20/244 (8%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R+R +Q +VP T+ + A+ + F I +EI+ VT+VG++ + E+ +++ + LD
Sbjct: 1 RAR-AQHIVPCTISQLLSATLVDE---MFKIGNVEISQVTVVGIIRHAEKAPTNIVYKLD 56
Query: 95 DGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
D T + ++W + E + YV++ G+L+SFQ KK +VAF + P+ + +E
Sbjct: 57 DMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEF 116
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
T H +E + H+ SKS Q P+ + + + + +A G G + P N G
Sbjct: 117 TTHILEVVNAHMTLSKSNSQP-PAGRAPISNPGMGETANFG--GNSSMPAN--------G 165
Query: 214 LKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDE 272
L +L+ ++ + R G++ +L QL+ + I ++ L NEG IYST+D+
Sbjct: 166 LTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLQHMTVASIKQAVDFLSNEGHIYSTVDD 222
Query: 273 FHYK 276
H+K
Sbjct: 223 DHFK 226
>gi|344245067|gb|EGW01171.1| Replication protein A 32 kDa subunit [Cricetulus griseus]
Length = 248
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 124/240 (51%), Gaps = 19/240 (7%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
SQ +VP T+ + A+ + + F I +EI+ VT+VG++ + E+ +++ + +DD T
Sbjct: 21 SQHIVPCTISQLLSATLTDEV---FKIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 77
Query: 99 RVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
+ ++W + E + YV++ G+L+SFQ KK +VAF + P+ + +E T H
Sbjct: 78 APMDVRQWVDTDDASGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIIPLEDMNEFTAHI 137
Query: 158 IECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDC 217
+E + H+ SKS Q + +P + +S + SG P N GL
Sbjct: 138 LEVVNSHMMLSKSNNQ-LSTGRPSISNSGMGEPG--NFSGNNLMPAN--------GLTVV 186
Query: 218 DQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L+ ++ + R G++ +L QL+ +P I ++ L NEG IYST+D+ H+K
Sbjct: 187 QNQVLNLIK---ACPRPEGLNFQDLRNQLQHMPVASIKQAVDFLCNEGHIYSTVDDDHFK 243
>gi|126328769|ref|XP_001364781.1| PREDICTED: replication protein A 32 kDa subunit-like [Monodelphis
domestica]
gi|126328771|ref|XP_001364851.1| PREDICTED: replication protein A 32 kDa subunit-like [Monodelphis
domestica]
Length = 275
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 134/263 (50%), Gaps = 20/263 (7%)
Query: 21 SQPPQSADYPSST-----ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTL 75
+QPP P+++ +R+R +Q +VP T+ + A+ + F I +EI+ VT+
Sbjct: 21 TQPPGGFGTPTASQAEKKSRAR-AQHIVPCTISQLLSATLVDE---VFKIGEIEISQVTI 76
Query: 76 VGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQ 134
VG++ E+ +++ + +DD T + ++W + E + YV++ G+L+SFQ
Sbjct: 77 VGIIRQAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQ 136
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTG 194
KK +VAF + P+ + +E T H +E + H+ S+S SQP SLNTS
Sbjct: 137 NKKSLVAFKILPLEDMNEFTIHILETVNAHMVLSQS------ISQPLAGRPSLNTSGIGD 190
Query: 195 LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKI 253
G+ + ++ +GL +L+ ++ + R G++ +L QL + I
Sbjct: 191 TGGFGGNSFSGNNFMPANGLTVTQNQVLNLIK---ACPRPEGMNFQDLKTQLHNVNVSVI 247
Query: 254 MDSIASLENEGLIYSTIDEFHYK 276
++ L NEG IYST+D+ H+K
Sbjct: 248 KQAVDFLSNEGHIYSTVDDDHFK 270
>gi|296414341|ref|XP_002836860.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632701|emb|CAZ81051.1| unnamed protein product [Tuber melanosporum]
Length = 348
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 120/237 (50%), Gaps = 9/237 (3%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K + EA+ ++ F I+ +E+T +TLV + E+A++ + +DDGTG +
Sbjct: 109 LRPVTIKQVLEATQP-HPEAEFKIDDVELTQLTLVAQIRAVSEQATNHTYKMDDGTGTLE 167
Query: 102 CKRW--ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIE 159
K+W A+ V D + +Q YVR++G LK+F GK+ + A +RP+T+F+E+ H +E
Sbjct: 168 VKQWVEATAVPDGPS-QKLQPNQYVRILGTLKAFGGKRHLGAHHIRPITDFNEIHYHLLE 226
Query: 160 CIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGV--DGLKDC 217
HL ++ + F + M + +SG A + + C
Sbjct: 227 ATAIHLHLTRGPPEQFGQTTGVMGHQMHDQGRDVAMSGMGAAVRGGGGAYYCPPNASPHC 286
Query: 218 DQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFH 274
+ ILD ++ S + G HVN +++ + + +I L G+ Y+TID+ H
Sbjct: 287 -RRILDVVR--SKPQHTDGTHVNTIAQMCGLSLTDVEKAIYELTEAGIAYTTIDDSH 340
>gi|431891188|gb|ELK02065.1| Replication protein A 32 kDa subunit, partial [Pteropus alecto]
Length = 266
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 141/279 (50%), Gaps = 26/279 (9%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+ +S F + + S GGF P Q+ +RSR +Q +VP T+ + A+ +
Sbjct: 5 YGNSTFGGAGGYTQSPGGFGSPAPSQA----EKKSRSR-AQHIVPCTISQLLSATLVDEV 59
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 60 ---FRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENTVV 116
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ +K+ +S
Sbjct: 117 PPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTAHILEVVNAHMTLNKA------NS 170
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
QP +S++ + +S V+GL +L+ ++ + R G++
Sbjct: 171 QPSRGRASISNPGMGEAGNFGG-----NSFMPVNGLTVAQNQVLNLIK---ACPRPEGLN 222
Query: 239 VNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+EL QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 223 FHELKNQLQHMTVVSIKQAVDFLSNEGHIYSTVDDDHFK 261
>gi|63054444|ref|NP_588227.2| single-stranded DNA binding protein Ssb2 [Schizosaccharomyces pombe
972h-]
gi|2498849|sp|Q92373.1|RFA2_SCHPO RecName: Full=Replication factor A protein 2; AltName:
Full=Single-stranded DNA-binding protein P30 subunit
gi|1502415|gb|AAC49438.1| single-stranded DNA binding protein p30 subunit
[Schizosaccharomyces pombe]
gi|157310517|emb|CAA21823.2| single-stranded DNA binding protein Ssb2 [Schizosaccharomyces
pombe]
Length = 279
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 35/282 (12%)
Query: 8 DASNAFS---GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFM 64
D ++AFS GGG ++ QS+ PS + L PVT+K I AS D + F
Sbjct: 14 DFNSAFSPGMGGGAGFNEYDQSSQ-PSVDRQQGAGNKLRPVTIKQILNASQVHAD-AEFK 71
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYV 124
I+G+E+ VT VG++ N + ++ + ++DGTG + + W E D + + YV
Sbjct: 72 IDGVEVGQVTFVGVLRNIHAQTTNTTYQIEDGTGMIEVRHW--EHIDA--LSELATDTYV 127
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVD 184
R+ GN+K F GK I + +R + + +EV H++E I HL ++ ++ P
Sbjct: 128 RVYGNIKIFSGKIYIASQYIRTIKDHNEVHFHFLEAIAVHLHFTQKANAVNGANAP---- 183
Query: 185 SSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQP----------SSSERE 234
TS G + N+SS + L +Q + +Y P S+ E
Sbjct: 184 -GYGTSNALGYN-------NISSNGAANSL---EQKLAEYSLTPAQMTVMQAIHSAPETN 232
Query: 235 RGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
GVHV +L++ + P + L+ EG+IY+TIDE H+K
Sbjct: 233 EGVHVRQLAQSVG-PGIDLTAVTDFLQQEGIIYTTIDENHFK 273
>gi|134110644|ref|XP_776149.1| hypothetical protein CNBD1960 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258817|gb|EAL21502.1| hypothetical protein CNBD1960 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 266
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 17/257 (6%)
Query: 23 PPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNK 82
P S D PS AR + Q + PVTVK I +A D ++F I+G+++ V L+G V N
Sbjct: 24 PYGSQDSPSRKARGGN-QTIRPVTVKQILDAQQVHPD-ADFTIDGVDVAQVLLIGSVRNM 81
Query: 83 EERASDVNFTLDDGTGRVVCKRWASEVFD-TREMEAIQDGMYVRLIGNLKSFQGKKQIVA 141
A+++++ + DGTG + + W D + + I+ YV L+G +K F GK+ + A
Sbjct: 82 STTATNISYEIGDGTGYIDARVWLDSADDESGKTTGIEQDHYVGLMGTIKVFGGKRHVSA 141
Query: 142 FSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTA 201
+RP+T+ +EV H ++ +Y L G P + P+ + + +A A
Sbjct: 142 THIRPITDGNEVQHHLLKALYVSLILRG----GTPGNAPKAAGTHDDYNA--------GA 189
Query: 202 PTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASL 260
T + Q L+ + IL+ L + GVHV + + L + ++ L
Sbjct: 190 TTGATDQSAWSHLEPLQRRILEVLSSEGQGN-DDGVHVTHIIKFLNGADENDFTVALDWL 248
Query: 261 ENEGLIYSTIDEFHYKF 277
+ G +YST+DE HY+
Sbjct: 249 TDNGYVYSTLDESHYQV 265
>gi|225707618|gb|ACO09655.1| Replication protein A 32 kDa subunit [Osmerus mordax]
Length = 276
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 139/294 (47%), Gaps = 42/294 (14%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSST------ARSRDSQGLVPVTVKMISEAS 54
M++ + +N +GG SQ P P+++ R+R +Q +VP TV + A+
Sbjct: 1 MWNQGGYSETNTMTGGY---SQSPGGFASPAASQGGEKKGRTR-AQQIVPCTVSQLMSAA 56
Query: 55 HSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTR 113
+ D F I +E+ VT VG++ + ++ +++ + +DD TG + K+W
Sbjct: 57 QAED---VFRIGDVEVAQVTFVGIIRSTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPGV 113
Query: 114 EMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ-- 171
+ I YV++ GNL+SFQ + +VAF+VRP+ + +E+T H +E + H+ K Q
Sbjct: 114 DSTVIPPNTYVKVSGNLRSFQNHRSVVAFNVRPLEDMNEITSHMLEVVQAHMMLGKPQST 173
Query: 172 --------VQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILD 223
P S+P M S + +S +GL +L
Sbjct: 174 MGGGGGMNTSMIPISKPGMGGVGGGYSGASDMSA--------------NGLSPSQNQVLR 219
Query: 224 YLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++ S + +G+ + +L ++L I I ++ L NEG I+STIDE H+K
Sbjct: 220 LIR---SCQDAQGISIQDLKQRLGGISLAVIKQAVEFLSNEGHIFSTIDEDHFK 270
>gi|405120055|gb|AFR94826.1| hypothetical protein CNAG_01316 [Cryptococcus neoformans var.
grubii H99]
Length = 266
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 17/257 (6%)
Query: 23 PPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNK 82
P S D PS R + Q + PVTVK + EA D ++F I+G+++ V LVG V N
Sbjct: 24 PYGSQDSPSRKTRGGN-QTIRPVTVKQVLEAQQVHPD-ADFTIDGVDVAQVLLVGSVRNM 81
Query: 83 EERASDVNFTLDDGTGRVVCKRWASEVFD-TREMEAIQDGMYVRLIGNLKSFQGKKQIVA 141
A++V++ + DGTG + + W D + + I+ YV L+G +K F GK+ + A
Sbjct: 82 STTATNVSYEIGDGTGYIDARVWLDSADDESGKTTGIEQDHYVGLMGTIKVFGGKRHVSA 141
Query: 142 FSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTA 201
+RP+T+ +EV H ++ +Y L G P + P+ + + +A A
Sbjct: 142 THIRPITDGNEVQHHLLKALYVSLILRG----GTPGNAPKAAGTRDDYNA--------GA 189
Query: 202 PTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASL 260
T + Q L+ + IL+ + + GVHV + + L + + ++ L
Sbjct: 190 TTGGTDQSAWSHLEPLQRRILEVMSSEGQGN-DDGVHVTHIIKFLNGVDENDFTVALDWL 248
Query: 261 ENEGLIYSTIDEFHYKF 277
+ G +YST+DE HY+
Sbjct: 249 TDNGYVYSTLDESHYQV 265
>gi|344287472|ref|XP_003415477.1| PREDICTED: replication protein A 32 kDa subunit-like [Loxodonta
africana]
Length = 270
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 135/269 (50%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPTPTQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FKIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 75 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDPSGENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E + H+ SKS Q P S P M
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTAHILEVVNAHMMLSKSNNQPSVGRAPISNPGM------ 188
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G +G A +S V+GL +L+ ++ + R G++ ++L QL+
Sbjct: 189 -----GEAGNFGA----NSFIPVNGLTVAQNQVLNLIK---ACPRPEGLNFDDLKTQLQY 236
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ I ++ L NEG IYST+D+ H+K
Sbjct: 237 MSAVSIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|62900928|sp|Q5RC43.1|RFA2_PONAB RecName: Full=Replication protein A 32 kDa subunit; Short=RP-A p32;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2
gi|55727828|emb|CAH90667.1| hypothetical protein [Pongo abelii]
Length = 270
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPAPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 75 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E I H+ SK+ Q P S P M ++
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAG-- 192
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G P N GL +L+ ++ + R G++ +L QLK
Sbjct: 193 -----NFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKH 236
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ + ++ L NEG IYST+D+ H+K
Sbjct: 237 MSVSSVKQAMDFLSNEGHIYSTVDDDHFK 265
>gi|347543774|ref|NP_001125362.2| replication protein A 32 kDa subunit [Pongo abelii]
Length = 343
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 96 SPGGFGSPAPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 147
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 148 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRS 207
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E I H+ SK+ Q P S P M ++
Sbjct: 208 FQNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAG-- 265
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G P N GL +L+ ++ + R G++ +L QLK
Sbjct: 266 -----NFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKH 309
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ + ++ L NEG IYST+D+ H+K
Sbjct: 310 MSVSSVKQAMDFLSNEGHIYSTVDDDHFK 338
>gi|388853617|emb|CCF52789.1| related to RFA2-DNA replication factor A, 36 kDa subunit [Ustilago
hordei]
Length = 283
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 135/257 (52%), Gaps = 24/257 (9%)
Query: 28 DYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERAS 87
D PSS + ++ L PVT++ I A H D + F ++G E+ +T V +V N + A+
Sbjct: 36 DSPSSKRQGNNT--LRPVTIRQILNAEHPHPD-AEFTLDGAELGQLTFVAVVRNISKNAT 92
Query: 88 DVNFTLDDGTGRVVCKRW-ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRP 146
+V ++++DGTG++ ++W S D ++ I+ +YVR++G +KSFQ ++ I A +R
Sbjct: 93 NVAYSVEDGTGQIEVRQWLESSGDDNQKASDIRQNVYVRVLGTVKSFQNRRSISAGHMRV 152
Query: 147 VTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLS 206
V +++EV H +E ++ HLQ ++ G SQ N GL Q ++++
Sbjct: 153 VVDYNEVLFHRLEAVHSHLQLTR----GVKPSQA-------NGGNNQGLYRGQEQTSDIN 201
Query: 207 SQFGVDGLKDCDQMI-LDYLQQP----SSSERER---GVHVNELSEQLK-IPQKKIMDSI 257
+ G + DQ LD L + +SE E GVHV ++ LK + ++ ++
Sbjct: 202 AYSGSNNQSVLDQYKSLDPLPRQIMGIVTSEAENHTDGVHVALIARMLKGVDVSEVKTAV 261
Query: 258 ASLENEGLIYSTIDEFH 274
L +EG +Y+ D+ H
Sbjct: 262 EELSSEGYLYTAADDDH 278
>gi|432910341|ref|XP_004078319.1| PREDICTED: replication protein A 32 kDa subunit-like [Oryzias
latipes]
Length = 271
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 125/245 (51%), Gaps = 15/245 (6%)
Query: 34 ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTL 93
R+R +Q ++P TV + AS + + F + +E+ VT+VG++ + ++ + + + +
Sbjct: 35 GRTRSTQ-IIPCTVSQLMSASQADE---AFKVGEVEVNQVTIVGIIRSTDKSMTYIQYRV 90
Query: 94 DDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
DD TG + K+W + + + G YV++ GNL+SFQ + +VAF +RP+ + +E
Sbjct: 91 DDMTGAPMDVKQWVDTEDPSVDSTVLPPGTYVKVSGNLRSFQNHRSMVAFCIRPLEDMNE 150
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD 212
+T H +E + H+ K Q M S++ A G+ G +++++ +
Sbjct: 151 ITSHMLEVVQAHMALGKP--QNTLGGGGGMTAGSVSKPAIGGMGGSYAGASDMTN----N 204
Query: 213 GLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTID 271
GL +L ++ +G+ + +L +L + I ++ L NEG I+STID
Sbjct: 205 GLSPNQNQVLSLIR---GCPEPQGISIQDLKHRLGGMSLPMIKQAVEFLSNEGHIFSTID 261
Query: 272 EFHYK 276
E H+K
Sbjct: 262 EDHFK 266
>gi|395521870|ref|XP_003765037.1| PREDICTED: replication protein A 32 kDa subunit [Sarcophilus
harrisii]
Length = 275
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 142/283 (50%), Gaps = 25/283 (8%)
Query: 4 SSQFDAS---NAFSGGGFMPSQPPQSADYPSST-----ARSRDSQGLVPVTVKMISEASH 55
+S FD S ++ GGG+ SQ P P+++ +R+R +Q +VP T+ + A+
Sbjct: 3 NSGFDGSYGNTSYGGGGY--SQAPGGFGTPTASQAEKKSRAR-AQHIVPCTISQLLSANL 59
Query: 56 SGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTRE 114
+ F I +EI+ VT+VG++ E+ +++ + +DD T + ++W + E
Sbjct: 60 IDE---VFKIGEIEISQVTIVGIIRQAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSE 116
Query: 115 MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG 174
+ YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ S+S
Sbjct: 117 NTVVPPETYVKVAGHLRSFQNKKSLVAFKILPLEDMNEFTIHILETVNAHMILSQS---- 172
Query: 175 FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERE 234
SQP SL+TS + +S +GL +L+ ++ + R
Sbjct: 173 --ISQPLAGRPSLHTSGIGDAGNFGGNSFGGNSLMPANGLTVTQNQVLNLIK---ACPRP 227
Query: 235 RGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
G++ +L QL + I ++ L NEG IYST+D+ H+K
Sbjct: 228 EGMNFQDLKSQLHNLNVSVIKQAVDFLSNEGHIYSTVDDDHFK 270
>gi|378726363|gb|EHY52822.1| replication factor A2 [Exophiala dermatitidis NIH/UT8656]
Length = 284
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 25/280 (8%)
Query: 4 SSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNF 63
S+ + A+ A GGGF+ +P S P++ + + PVT+K I +A D ++F
Sbjct: 11 STSYGANRAADGGGFVAGEPQSS---PAAGRGGFGKETIRPVTIKQIKDAQQPHPD-ADF 66
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW----ASEVFDTREMEAIQ 119
++G + VT VG + + + +++ +T+DDGTG K+W A+ + +M+ I+
Sbjct: 67 TVDGEALGQVTFVGQIRSINTQPTNITYTIDDGTGIAEVKQWIDSDAAMNMNADKMDGIE 126
Query: 120 DG-------MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQV 172
G Y R+ G LK+F K+ I A +RP+T+++E+ H +E HL
Sbjct: 127 SGKPRLVEDAYCRVWGRLKAFHNKRHIGAHIIRPITDYNEINYHLLEATAVHLF------ 180
Query: 173 QGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSE 232
F PQ G +G ++ + + + + + L+ ++++
Sbjct: 181 --FTRGPPQQNGQKGVVGGTNGAAGVTHQEFASATDSALPNVSPLARRVYNTLK--NTAQ 236
Query: 233 RERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
G+HV L+ Q+ + + L G+I++T+D+
Sbjct: 237 SNEGLHVQMLASQMGMNVNDVYKGAEELLAIGVIFTTVDD 276
>gi|443686965|gb|ELT90082.1| hypothetical protein CAPTEDRAFT_218725 [Capitella teleta]
Length = 261
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 127/248 (51%), Gaps = 28/248 (11%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
+Q ++PVTV + A +GD N + + +E+ V+++G+V + E + + + +DD T
Sbjct: 27 AQNVIPVTVAQVLAAQQNGD---NLIWDEIELHQVSILGIVRSVNENPTRLEYFIDDLTA 83
Query: 99 RVVCKRW---ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTC 155
R + R A E + + ++ YV++ G ++ FQGK+ I AF + V + + +T
Sbjct: 84 RPLEVRQFVDADENAPEDKTDIARENQYVQVFGTIRDFQGKRSINAFKILQVADANTITT 143
Query: 156 HYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTN--LSSQFGVD- 212
H +E I+ HL K+++ S Q + GY A +N + FG +
Sbjct: 144 HLLEVIHAHLALKKAKIASEAGSWAQTAE------------GYSNATSNPPAAMSFGSNH 191
Query: 213 ---GLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYS 268
GL + + ++ S ++G+ V+ +++ L+ IPQK I D+I L EG IYS
Sbjct: 192 MDQGLTPTQAQVHNVIRACSE---DQGMSVHTITDNLRGIPQKAIRDAIEFLSAEGHIYS 248
Query: 269 TIDEFHYK 276
T+D+ HY+
Sbjct: 249 TVDDEHYR 256
>gi|349732264|ref|NP_001231871.1| replication protein A 32 kDa subunit [Sus scrofa]
Length = 270
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 131/269 (48%), Gaps = 32/269 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPTPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FKIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ A+++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 75 TIVGIIRHAEKAATNIVYKIDDMTAAPMDVRQWVDTDDASGENTVVPPETYVKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGF----PSSQPQMVDSSLN 188
FQ KK +VAF + P+ + +E T H +E + H+ +KS Q P S P M +
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMLLNKSNSQLLAGRVPVSNPGMGEVG-- 192
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
G P N GL +L+ ++ + R G++ +L QL+
Sbjct: 193 -----SFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLQH 236
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ I ++ L NEG IYST+D+ H+K
Sbjct: 237 MSVASIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|343429403|emb|CBQ72976.1| related to RFA2-DNA replication factor A, 36 kDa subunit
[Sporisorium reilianum SRZ2]
Length = 285
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 126/245 (51%), Gaps = 24/245 (9%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT++ + A D + F ++G E+ +T V +V N A+++ ++++DGTG++
Sbjct: 48 LRPVTIRQLINAEQPHPD-AEFTLDGAELGQLTFVAVVRNISRNATNIAYSVEDGTGQIE 106
Query: 102 CKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
++W S DT + I+ +YVR++G LKSFQ ++ I A +R VT+++EV H +E
Sbjct: 107 VRQWLDSSGDDTNKASDIRQNVYVRVLGTLKSFQNRRSISAGHMRLVTDYNEVMFHRLEA 166
Query: 161 IYFHLQ----------NSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG 210
++ HLQ N G +QPQ D +A +G + Q N+ Q+
Sbjct: 167 VHSHLQLTRGPKASQANGGGAAHGVDRAQPQTSD----INAYSGSANKQ----NVLDQY- 217
Query: 211 VDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYST 269
L+ + I+ + + + GVHVN ++ LK + + ++ L +EG +Y+
Sbjct: 218 -KSLEPLPRQIMGIVTTEADKHTD-GVHVNLIARMLKGVDVADVKVAVEELSSEGYLYTA 275
Query: 270 IDEFH 274
D+ H
Sbjct: 276 ADDDH 280
>gi|18859321|ref|NP_571786.1| replication protein A 32 kDa subunit [Danio rerio]
gi|11496148|gb|AAG12435.1| replication protein A [Danio rerio]
Length = 272
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 27/260 (10%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF Q D R+R +Q +VP TV + A + D F + +EI V
Sbjct: 18 SPGGFGSPAASQGGD---KKGRTR-AQQIVPCTVSQLLSAVQAEDV---FKVGEVEIAQV 70
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREM----EAIQDGMYVRLIG 128
T+VG++ + ++ ++ + +DD T + K+W DT +M I G YV++ G
Sbjct: 71 TIVGVIRSTDKSTINIQYKVDDMTAAPMDVKQW----IDTEDMGVDNSVIPPGSYVKVSG 126
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLN 188
NL+SFQ + +VAFSVR + + +EVT H +E + HLQ SK Q G + +S+N
Sbjct: 127 NLRSFQNNRSLVAFSVRVLEDMNEVTSHMLEVVNAHLQQSKPQNMGGDERMMPVSHNSMN 186
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
+ TG GY A L V+GL +L ++ S + +G+ ++EL ++L
Sbjct: 187 SMGTTG--GYSGANMML-----VNGLSATQNQVLSLIK---SCQELQGISMHELKQKLNS 236
Query: 248 IPQKKIMDSIASLENEGLIY 267
+ I ++ L NEG Y
Sbjct: 237 MSANVIRQTVDFLSNEGHQY 256
>gi|355717107|gb|AES05825.1| replication protein A2, 32kDa [Mustela putorius furo]
Length = 293
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 132/265 (49%), Gaps = 24/265 (9%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P S S AR+ Q +VP T+ + A+ + F I +EI+ V
Sbjct: 47 SPGGF--GSPTLSQAEKKSRARA---QHIVPCTISQLLSATLVDE---MFKIGNVEISQV 98
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+S
Sbjct: 99 TIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLRS 158
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQ KK +VAF + P+ + +E T H +E + H+ SKS Q P+ + M + +
Sbjct: 159 FQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMILSKSNSQP-PAGREPMSNPGM---GE 214
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQK 251
TG+ G +S +GL +L+ ++ + R G++ +L QL +
Sbjct: 215 TGIFGG-------NSSIPANGLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLHHMTVA 264
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
I ++ L NEG IYST+D+ H+K
Sbjct: 265 SIKQAVDFLSNEGHIYSTVDDDHFK 289
>gi|255956779|ref|XP_002569142.1| Pc21g21700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590853|emb|CAP97067.1| Pc21g21700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 276
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 131/266 (49%), Gaps = 27/266 (10%)
Query: 18 FMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVG 77
FMP + A RD++ L PVTVK + +AS + + F ++G ++ NV +G
Sbjct: 19 FMPGETNSPA---GGKTFDRDNKTLRPVTVKQVLDASQPFPE-APFQVDGADVANVLFMG 74
Query: 78 LVYNKEERASDVNFTLDDGTGRVVCKRWA----SEVFDTREMEAIQDGM-------YVRL 126
V N ++++V + +DDGTG + K+W ++ DT + +A DG Y R+
Sbjct: 75 QVRNISSQSTNVTYKIDDGTGEIEVKKWVDSTTADNMDTDDGKAPGDGKTELELNGYARV 134
Query: 127 IGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSS 186
G++KSF K+ I A SVRP++N +E+ H +E HL ++ G D+
Sbjct: 135 FGSIKSFGNKRYIGAHSVRPLSNINELHTHLLEATAVHLFFTRGPPGGAAPGGNAGGDAV 194
Query: 187 LNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL 246
+ + G SG A ++S + I + L+ + + + G+H+ ++ +L
Sbjct: 195 MGGADDYG-SGQNKALASMSL---------VAKKIYNLLK--TEPQDDTGLHMQVIASKL 242
Query: 247 KIPQKKIMDSIASLENEGLIYSTIDE 272
+P ++ + L G+I+ST+DE
Sbjct: 243 NMPATEVARAGEELLGAGVIFSTMDE 268
>gi|389635329|ref|XP_003715317.1| replication protein A 32 kDa subunit [Magnaporthe oryzae 70-15]
gi|351647650|gb|EHA55510.1| replication protein A 32 kDa subunit [Magnaporthe oryzae 70-15]
gi|440464975|gb|ELQ34323.1| replication protein A 32 kDa subunit [Magnaporthe oryzae Y34]
gi|440480859|gb|ELQ61499.1| replication protein A 32 kDa subunit [Magnaporthe oryzae P131]
Length = 275
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 16/276 (5%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKS 61
FS + ++A A GGGFM S +S + L PVTVK + + D +
Sbjct: 9 FSRTGYNAQGAEDGGGFMGGSQQGSQ--GGPGGKSYQDECLKPVTVKQLLDVQAPYPD-A 65
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW--ASEVFDTREMEAIQ 119
+F+++G IT +TLVG V + + +++ + +DDGTG + KRW + D Q
Sbjct: 66 DFLLDGRAITQITLVGQVRSINPQPTNITYRIDDGTGTIDVKRWIDPEKAEDADAASQHQ 125
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
YVR+ G LK+F ++ + A VRPV +F+EV H +E Y HL + G +
Sbjct: 126 PDSYVRVWGKLKAFNNRRHVGALFVRPVEDFNEVNYHMLEVAYVHLDAVRQSSGGGGGAG 185
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHV 239
D+ S G G + N S+ Q + ++LQ +SS G+
Sbjct: 186 GGGDDNMFVDSYGGGGGGGGSKAANCSTNA---------QRLFNHLQ--NSSAGNEGLEA 234
Query: 240 NELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
N ++ + + + + + L + GLIY T+D+ +
Sbjct: 235 NIIARGINMSVRDVEAAADELLSAGLIYPTVDDHTW 270
>gi|166092119|gb|ABY82099.1| replication protein A2, 32kDa (predicted) [Callithrix jacchus]
Length = 270
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 131/265 (49%), Gaps = 24/265 (9%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPGPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG++ + E+ +++ + +DD T + ++W + E + Y ++ G+L+S
Sbjct: 75 TIVGIIRHTEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASSENTVVPPETYWKVAGHLRS 134
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQ KK +VAF + P+ + +E T H +E I H+ SK+ G PS+ + S+ S
Sbjct: 135 FQNKKSLVAFKIMPLEDMNEFTAHILEVINAHMILSKA--SGQPSAGKAPI-SNPGMSEA 191
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQK 251
G P N GL +L+ ++ + R G++ EL QLK +
Sbjct: 192 GNFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQELRNQLKHMSVP 240
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
I ++ L NEG IYST+D+ H+K
Sbjct: 241 SIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|226372612|gb|ACO51931.1| Replication protein A 32 kDa subunit [Rana catesbeiana]
Length = 273
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 38/277 (13%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q +RSR +Q +VP TV + A+ S + F I +E++ V
Sbjct: 24 SPGGFGSPAPTQG----EKKSRSR-TQQIVPCTVSQLLSATQSDE---LFKIGEVELSQV 75
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
T+VG+V + E+ +++ + +DD T + ++W + E + G YV++ G+L+S
Sbjct: 76 TIVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEASCESVVVPPGSYVKVSGHLRS 135
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
FQ KK +VAF + PV + +E H +E I+ H+ ++QP SSL S
Sbjct: 136 FQNKKSVVAFKIAPVEDMNEFVSHMLEVIHSHMS---------LNAQPGGGGSSLTLSTP 186
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSE---------RERGVHVNELS 243
S + + +GL IL+ ++ SE R G++VN +
Sbjct: 187 GRASSDTGGSFSGGNDMHTNGLTPHQSQILNLIRSCKGSEGMGFEDLKSRLHGMNVNTIK 246
Query: 244 EQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFARG 280
+ L+ L NEG IYST+D+ HYK G
Sbjct: 247 QALEF-----------LSNEGHIYSTVDDDHYKSTDG 272
>gi|322706765|gb|EFY98345.1| putative replication factor-a protein [Metarhizium anisopliae ARSEF
23]
Length = 276
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 25/279 (8%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEA--SHSGDD 59
+S + + A GGF S +S + L PVTVK I EA + SG D
Sbjct: 7 YSKTSYGAQGGDDSGGFFAGGSQPG----SQGGKSYQDESLRPVTVKQILEADEAFSGAD 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWA-SEVFDTREMEAI 118
F I+ IT +T VG V N + ++V +DDGTG++ K+W ++ D +
Sbjct: 63 ---FKIDNTAITQITFVGQVRNINPQPTNVTLKIDDGTGQIEVKKWIDADKADDGNADQY 119
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQV----QG 174
+ YVR+ G LKSF K+ + A +RPVT+F+EV H +E Y HL ++ +
Sbjct: 120 ELDSYVRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHLLEATYVHLYLTRGPLGQDGAA 179
Query: 175 FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSER 233
+ VD G Q LS V G + + +++ P +E
Sbjct: 180 NGGGESMFVDGGAYGGNANGGGSGQM----LSK---VSGCGPLAKRMFNFMNGTPGMNE- 231
Query: 234 ERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
GVH+N +S + + ++ + L +GLIY+T+D+
Sbjct: 232 --GVHLNVISSSTGMSVRDVLAAADELLGQGLIYTTVDD 268
>gi|326932867|ref|XP_003212533.1| PREDICTED: replication protein A 32 kDa subunit-like isoform 1
[Meleagris gallopavo]
Length = 267
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 30/272 (11%)
Query: 16 GGFMP----SQPPQSADYPSSTA-----RSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
GG+ P +Q P P+ RSR SQ +VP TV + A + F I+
Sbjct: 10 GGYGPAGGYTQSPGGFSSPTGAQAEKKQRSR-SQSIVPCTVSQLLAAEQVDE---AFRIH 65
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVR 125
+EI+ VT+VG+V + E+ +++ + +DD T + ++W E + G YV+
Sbjct: 66 DVEISQVTVVGIVRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEAGSENIVVPPGTYVK 125
Query: 126 LIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDS 185
+ G+L+SFQ KK +VAF + P+ N +E T H +E + H+ K+ + S PQ
Sbjct: 126 VAGHLRSFQNKKSLVAFKIMPLENMNEFTTHILETVNAHMILRKNLM--LASRAPQ---- 179
Query: 186 SLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQ 245
S ++ + + Y V+GL +L+ ++ S E G+ + EL Q
Sbjct: 180 SFTSAGMSDVGSYG------GGSLPVNGLTAHQSQVLNLIKNCHSPE---GMSLQELKLQ 230
Query: 246 L-KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
L + I ++ L +EG IYST+D+ HYK
Sbjct: 231 LHNVSIPTIKQAVEFLSSEGHIYSTVDDDHYK 262
>gi|408396398|gb|EKJ75557.1| hypothetical protein FPSE_04332 [Fusarium pseudograminearum CS3096]
Length = 292
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 20/276 (7%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMI--SEASHSGDD 59
F+ + + A GGF Q + A +S L PVT+K I +E +++G D
Sbjct: 24 FTKTSYGAQGGDDSGGFFAGGSQQGSQGGGGKAYQDES--LRPVTIKQILDAEEAYAGAD 81
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEA-I 118
F I+G +T +T VG V + + + +++ +DDGTG++ K+W +V + EA
Sbjct: 82 ---FKIDGSPVTQITFVGQVRSVQPQPTNITLKIDDGTGQIEVKKWI-DVDKADDSEAGF 137
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
+ +VR+ G LKSF K+ + A +RPV +F+EV H +E Y HL +K + G
Sbjct: 138 ELDSHVRIWGRLKSFNNKRHVGAHVIRPVADFNEVNYHMLEATYVHLYFTKGPLGGQGGG 197
Query: 179 QPQMVDSSLNTSARTGLSGYQ-TAPTNLSSQFGVDGLKDCDQMILDYL-QQPSSSERERG 236
++ GY A N +S + G + + +++ QP +E G
Sbjct: 198 ANGDDGMFVDG------GGYNDNAGGNTNSHSKLAGCSPLAKKMFNFMSDQPGGNE---G 248
Query: 237 VHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
VHVN ++ + + + + L +GLIY+T+D+
Sbjct: 249 VHVNIITSSTGMSVRDALTASDELLGQGLIYTTVDD 284
>gi|449547019|gb|EMD37987.1| hypothetical protein CERSUDRAFT_48111, partial [Ceriporiopsis
subvermispora B]
Length = 235
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 22/246 (8%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K + +A+ + D + + ING EI VT+V V + ++ + LDDGTGR+
Sbjct: 2 LRPVTIKQLLDATQAHSD-AEWQINGQEIGAVTVVAHVLTIHAQTTNCVYWLDDGTGRME 60
Query: 102 CKRWASEVFDTRE-MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
++W+ D + + I +G YVR++G K F KK I A ++RPVT+ +E+ H +E
Sbjct: 61 ARQWSPSDEDGGDKLRGITEGTYVRVMGTPKIFGQKKYINATALRPVTDPNEIQFHLLET 120
Query: 161 IYFHLQNSKSQVQGFPSSQPQM-VDSSLNTSARTGLSGY----QTAPTNLSSQFGVDGLK 215
+ K +G S +P+ V++ N +A S Y +AP+N Q+ L
Sbjct: 121 MMVW----KILERGPVSEKPRANVNAYANGAALGTASAYSKQTHSAPSN--PQWA--HLP 172
Query: 216 DCDQMILDYLQQPSSSERERGVHVNELSEQLKIP---QKKIMDSIASLENEGLIYSTIDE 272
D + I++Y+ + + G+H ++ IP I ++ L + G IYSTID+
Sbjct: 173 DLQRRIVEYMA--AQTAIPEGIHARNIAA--SIPGGNATAIAGALDDLMDTGYIYSTIDD 228
Query: 273 FHYKFA 278
HY +
Sbjct: 229 SHYALS 234
>gi|363748783|ref|XP_003644609.1| hypothetical protein Ecym_2034 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888242|gb|AET37792.1| Hypothetical protein Ecym_2034 [Eremothecium cymbalariae
DBVPG#7215]
Length = 280
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 40/289 (13%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
F+ ++ SGGGF SQ SA P+S A + + L PVT+K I EA D +++N
Sbjct: 9 FNEYSSVSGGGFDNSQA--SAGKPNS-AGGQTTATLTPVTIKQILEAKQFVQDGP-YVVN 64
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREM----------- 115
+E+ N+ VG+V N + ++VN T++DGTG++ ++W+++ D
Sbjct: 65 NIELHNICFVGVVRNVVDHTANVNVTVEDGTGQLEFRQWSNDQKDIERASQGEKGEYNSE 124
Query: 116 --EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY-FHLQNSKSQV 172
+ Q G YV++ L+ F GK I V+P+ NF+EV H++ I + L N K
Sbjct: 125 VSQQFQIGSYVKVFATLREFGGKMNIQYALVKPIENFNEVIAHHLSAIKCYALANGKL-- 182
Query: 173 QGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD----GLKDCDQMILDYLQQP 228
P+ S++ T TG +N S F D K Q ILD+ +
Sbjct: 183 -AHPT-------SAVGTGTSTG------QESNAQSLFVQDNDFSNAKPATQRILDFCRDQ 228
Query: 229 SSSERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ VH +++ L + + + +L +G IY T DE Y
Sbjct: 229 CRDKDANTFSVHTKLIAQSLGMLEDDVRMHCQTLTEQGFIYPTFDENSY 277
>gi|299472930|emb|CBN80499.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 329
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 137/270 (50%), Gaps = 32/270 (11%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
++++ Q L+ V +K + E+ + D S I+G +++ + LVG + +E +++ +T++
Sbjct: 60 KNKEQQSLLSVNIKQVLESEMANQD-SGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVE 118
Query: 95 DGTGRVVCKRWAS--EVFDTREMEA---IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
D TGR+ K + + E + R E Q G YVR+ GN++S++ + VA+++ P+T+
Sbjct: 119 DTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPITD 178
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSS-QPQMVDSSLNTSARTGLSGYQ-----TAPT 203
DEVT H +E IY HL N+K + G S+ V +N G +G T+P
Sbjct: 179 MDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPG 238
Query: 204 NLSSQF--------------GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-- 247
N S+ G G Q + D Q ++ E+G + E+++ L
Sbjct: 239 NNSNNNNNNNMYNNSNMDPEGSKGFTPIQQKVHD---QFLGADEEQGRSIAEVADSLTRE 295
Query: 248 -IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
I + + ++ L +EG +YSTID+ HY+
Sbjct: 296 GISRTDVSTAVQFLSSEGHLYSTIDDDHYR 325
>gi|149695006|ref|XP_001500549.1| PREDICTED: replication protein A 32 kDa subunit-like [Equus
caballus]
Length = 252
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 127/246 (51%), Gaps = 20/246 (8%)
Query: 33 TARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFT 92
+AR+R +Q +VP T+ + A+ + F I +EI+ VT+VG++ + E+ +++ +
Sbjct: 20 SARAR-AQHIVPCTISQLLSATLIDEA---FKIGNVEISQVTIVGIIRHAEKAPTNIVYK 75
Query: 93 LDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFD 151
+DD T + ++W + E + YV++ G+L+SFQ KK +VAF + P+ + +
Sbjct: 76 IDDMTAAPMDVRQWVDTDDTSGENAVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMN 135
Query: 152 EVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGV 211
E T H +E + H+ +K+ Q P+ + + + + + G G P N
Sbjct: 136 EFTTHILEVVNAHMMLNKANSQP-PAGRASISNPGMGEAGNFG--GNSLMPAN------- 185
Query: 212 DGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTI 270
GL +L+ ++ + R G++ +L QL+ + I ++ L NEG IYST+
Sbjct: 186 -GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLQHMAVASIKQAVDFLSNEGHIYSTV 241
Query: 271 DEFHYK 276
D+ H+K
Sbjct: 242 DDDHFK 247
>gi|291415888|ref|XP_002724181.1| PREDICTED: replication protein A2, 32kDa [Oryctolagus cuniculus]
Length = 268
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 125/247 (50%), Gaps = 26/247 (10%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R+R +Q +VP T+ + A+ + + F I +EI+ VT+VG++ + E+ +++ + +D
Sbjct: 38 RAR-AQHIVPCTISQLLSATLADE---VFKIGNVEISQVTIVGIIRHAEKAPTNIVYKID 93
Query: 95 DGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
D T + ++W + E + YV++ G+L+SFQ KK +VAF + P+ + +E
Sbjct: 94 DMTAAPMDVRQWVDTDDASGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEF 153
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNT---SARTGLSGYQTAPTNLSSQFG 210
T H +E + H+ +KS SQP +S + S SG P N
Sbjct: 154 TAHILEVVNAHMMLNKSH------SQPSAGRASFSNPGMSEAGNFSGNSFLPAN------ 201
Query: 211 VDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYST 269
GL +L+ ++ + R G++ ++L QL + I ++ L NEG IYST
Sbjct: 202 --GLTPAQNQVLNLIK---ACPRPEGLNFHDLKNQLHHMTVASIKQAVDFLSNEGHIYST 256
Query: 270 IDEFHYK 276
+D+ H+K
Sbjct: 257 VDDDHFK 263
>gi|242048536|ref|XP_002462014.1| hypothetical protein SORBIDRAFT_02g012600 [Sorghum bicolor]
gi|241925391|gb|EER98535.1| hypothetical protein SORBIDRAFT_02g012600 [Sorghum bicolor]
Length = 194
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 71 TNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ---DGMYVRLI 127
T V LVG + NK + DV FTL DG G++ RW +E D +E+ + DG YV +
Sbjct: 40 TVVRLVGRMLNKVQHVKDVQFTLHDGAGKIDVNRWENESSDAKEIADVNFTSDGDYVIVN 99
Query: 128 GNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
G LK FQGK+ IVA+SVR VT+F+E+ H++ CI HL +++ + Q
Sbjct: 100 GGLKGFQGKRHIVAYSVRRVTDFNEIPHHFLHCIQVHLDHTRPKAQ 145
>gi|410927418|ref|XP_003977145.1| PREDICTED: replication protein A 32 kDa subunit-like [Takifugu
rubripes]
Length = 274
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 132/271 (48%), Gaps = 28/271 (10%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF Q + RSR +Q ++P TV + AS + + F + +E+ +
Sbjct: 18 SPGGFASPALSQGGE---KKGRSRATQ-IIPCTVSQLMSASQADEA---FKVGDVEVVQI 70
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
TLVG++ + ++ +++ + +DD T + K+W + + YV++ GNL+S
Sbjct: 71 TLVGVIRSTDKSMTNIQYKVDDMTAAPMDVKQWVDTEDPNVDSTVLPPDTYVKVSGNLRS 130
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQ---MVDSSLNT 189
FQ + +VAFSVRP+ + +E+T H +E + H+ + G P S V+S+
Sbjct: 131 FQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHM------ILGTPKSMGSGGGRVNSNSTQ 184
Query: 190 SARTG---LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL 246
RT L G T +++ +GL +L ++ S +G+ + EL ++L
Sbjct: 185 MPRTNTETLGGSYTGVDMMAN----NGLSANQNQVLSLIR---SCPYPQGISIQELKQRL 237
Query: 247 K-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
I I + L NEG I+STIDE HYK
Sbjct: 238 SGIGLSVIKQVVEFLSNEGHIFSTIDEDHYK 268
>gi|242072626|ref|XP_002446249.1| hypothetical protein SORBIDRAFT_06g009921 [Sorghum bicolor]
gi|241937432|gb|EES10577.1| hypothetical protein SORBIDRAFT_06g009921 [Sorghum bicolor]
Length = 144
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 62/95 (65%)
Query: 79 VYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQ 138
+ NK + DV FTL DG G++ RW +E D +EM + DG YV + G LK FQGK+
Sbjct: 2 MLNKVQHVKDVQFTLHDGAGKIDVNRWENESSDAKEMADVNDGDYVIVNGGLKGFQGKRH 61
Query: 139 IVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
IVA+SVR VT+F+E+ H++ CI HL +++ + Q
Sbjct: 62 IVAYSVRRVTDFNEIPHHFLHCIQVHLDHTRPKAQ 96
>gi|358393792|gb|EHK43193.1| hypothetical protein TRIATDRAFT_320493 [Trichoderma atroviride IMI
206040]
Length = 324
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 16/241 (6%)
Query: 35 RSRDSQGLVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFT 92
+S + L P+T+K I +E +SG + F ++G IT +T VG V + + +++
Sbjct: 89 KSYQDESLRPLTIKQILDAEEPYSG---AEFKVDGTPITQITFVGQVRSINPQQTNLTIR 145
Query: 93 LDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
+DDGTG++ K+W + ++R+ G LKSF K+ + A +RPVT+F+E
Sbjct: 146 VDDGTGQIDVKKWIDADKQGDAEPGFEIDSHIRVWGRLKSFSNKRHVGAHVIRPVTDFNE 205
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD 212
V H +E Y HL N++ ++ + G G Q P+ LS
Sbjct: 206 VNYHLLEATYVHLVNTRGPAGAGANANGDSMFVDGGDGFNAGAGGAQL-PSKLS------ 258
Query: 213 GLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTID 271
G + + YL P ++ G+H++ ++ + ++++ + L +GLIY+T+D
Sbjct: 259 GCSTVAKRVYTYLNDTPGGND---GMHLSNITASTGLGMREVITAADELLGQGLIYTTVD 315
Query: 272 E 272
+
Sbjct: 316 D 316
>gi|67516601|ref|XP_658186.1| hypothetical protein AN0582.2 [Aspergillus nidulans FGSC A4]
gi|40747525|gb|EAA66681.1| hypothetical protein AN0582.2 [Aspergillus nidulans FGSC A4]
gi|259489153|tpe|CBF89190.1| TPA: possible replication factor-a protein (AFU_orthologue;
AFUA_6G11130) [Aspergillus nidulans FGSC A4]
Length = 278
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 137/273 (50%), Gaps = 39/273 (14%)
Query: 18 FMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVG 77
FMP + PS + ++ L PVT+K I +A+ + +NF I+G +++++ +G
Sbjct: 19 FMPGE----TTSPSGGRQEWNNTTLRPVTIKQILDATQPYPE-ANFTIDGQDVSSIVFIG 73
Query: 78 LVYNKEERASDVNFTLDDGTGRVVCKRW--ASEVFDTRE--------MEAIQDGMYVRLI 127
V N +A++V + LDDGTG V K+W SE DT E + ++ Y ++
Sbjct: 74 QVRNISTQATNVTYKLDDGTGEVEAKQWINPSEAMDTTEDFGKEGKDLNGVEINGYAKVF 133
Query: 128 GNLKSFQGKKQIV-AFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV--- 183
G LKS G +++V VRP+T+ +E+ H++E HL +++ G P
Sbjct: 134 GKLKSLFGDRKVVNTHCVRPLTDINELHVHFLEAAAVHLFHTR----GAPGPAAGATGKI 189
Query: 184 ---DSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHV 239
D+++ G+ G P N+S+ + + + L+ +P ++E G+H
Sbjct: 190 DGGDAAMGGLDGAGVGGGGGFPANMSA---------TARRVYNLLRTEPQNNE---GLHA 237
Query: 240 NELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
++ +L +P + ++ + L N G+++ST+D+
Sbjct: 238 QFIAAKLGLPPQDVVRAGDELINAGMVFSTVDD 270
>gi|428171079|gb|EKX39999.1| replication protein A2, 32kDa [Guillardia theta CCMP2712]
Length = 288
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 131/258 (50%), Gaps = 28/258 (10%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+G++PV++K + A D+ + I+G + VT++ + + +E ++ V F+L+DGTG
Sbjct: 34 KGMLPVSIKQVMNAPQDSQDE-DIKIDGRDTKQVTIIAYIVDVKETSTSVTFSLEDGTGN 92
Query: 100 VVCKRWASE---VFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCH 156
+ W + F R G YVR++G ++S GK+ +VAF +R VT+F+E+T H
Sbjct: 93 IDAIMWIDQDESEFMVRSRAEWVVGTYVRVVGQVRSHNGKRSMVAFHLRTVTDFNELTYH 152
Query: 157 YIECIYFHLQNSKSQVQ------GFPSS------QPQMVDSSLNTSARTGLSGYQTAPTN 204
+ I+ HL N++ + GFPSS +P M + ++ G +G ++
Sbjct: 153 LFDTIHAHLYNTRGPLADSKPQTGFPSSSFQSPGKPSM-GPGFTSPSQPGGAGAGRVDSS 211
Query: 205 LSSQFGVDGLKDC-DQMILDYLQQPSSSERERGVHVNELSEQL------KIPQKKIMDSI 257
+ V +++ + +D+ ++ G+ ++ +Q+ + + ++ I
Sbjct: 212 RPAGGPVTDMREAVHKAFIDF----GATGDLTGLSIDNCVQQVSRVMGRSVSRAEVSSHI 267
Query: 258 ASLENEGLIYSTIDEFHY 275
+L +G IYSTIDE H+
Sbjct: 268 ENLALDGHIYSTIDEEHF 285
>gi|255725020|ref|XP_002547439.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135330|gb|EER34884.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 266
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 142/273 (52%), Gaps = 24/273 (8%)
Query: 11 NAFSGGGFMP-SQPPQSADYPSSTARSRDSQ---GLVPVTVKMISEASHSGDDKSNFMIN 66
+A+SGGGF SQ SAD+ S+ + +Q L PVT+K I++AS D + F +N
Sbjct: 7 DAYSGGGFGNISQGGFSADHQGSSQSQKSNQVRQSLTPVTIKQINDASQHVPD-AEFKVN 65
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD----GM 122
+E+ ++ VG+V + + + T++DGTG + + W SE T E E +
Sbjct: 66 NVELNMISFVGVVRKVDNNNATIVITIEDGTGSIEVRVWISEQITTAEQETQKYEALLNR 125
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQM 182
YV + G+LK F +K + S+ P+T+ +++ H++ I HL K+Q PSS
Sbjct: 126 YVFVGGSLKQFNNRKSVQNSSIFPITDSNQILYHHLSAIENHL---KAQGIQKPSSSGGS 182
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
+ N++ +G++G Q G G D+ +L L++ S++ +E GV V+ +
Sbjct: 183 LFVDGNSNTNSGVAGAQ----------GNQGGSLTDR-VLAVLKENSTTMQE-GVPVDYI 230
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
S++L I +++ ++ + L G Y+ D+ Y
Sbjct: 231 SQKLNISREEALEHVNKLVEGGKAYAGYDDNTY 263
>gi|412987584|emb|CCO20419.1| predicted protein [Bathycoccus prasinos]
Length = 272
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 8 DASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNF-MIN 66
D + F GGG+ + D PSS + + + PVT+K ISEA+ S + F ++
Sbjct: 8 DGATQFQGGGYGTNTGASGGD-PSSYQKRQQEDSITPVTIKQISEATASSAEADEFALLT 66
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASE---------VFDTREMEA 117
G I VT+VG + +KEE + ++DDGTG CK + E F+T E
Sbjct: 67 GKPIGLVTIVGKIVSKEETGAHKLLSVDDGTGACCCKEYPGEETAEGANEVTFETNE--- 123
Query: 118 IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPS 177
YVR+ G LKS+ + I + R +T+F+EV H+++ +Y + S +
Sbjct: 124 -----YVRVTGKLKSWNDARYIQVMNCRKITDFNEVAFHFLDAMYASSRFSNEK------ 172
Query: 178 SQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSS-SERERG 236
SS+ A T A +S D + +L PS + + G
Sbjct: 173 ------GSSVAAQATTATGAAPAAYAMPTSGNNPDAGGSLQEQLLAIYNNPSGPAAGDSG 226
Query: 237 VHVNELSEQL--KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ ++E+ + L K + +++ L NEG +YSTI + H++
Sbjct: 227 IEISEMCKLLGGKYTMDAVREAVEMLSNEGHVYSTITDDHHR 268
>gi|367022396|ref|XP_003660483.1| hypothetical protein MYCTH_2124177 [Myceliophthora thermophila ATCC
42464]
gi|347007750|gb|AEO55238.1| hypothetical protein MYCTH_2124177 [Myceliophthora thermophila ATCC
42464]
Length = 370
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 12/235 (5%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K + + + + ++G+ T VTLVG V + +A +V + LDDGTG +
Sbjct: 136 LRPVTIKQLIDCKEA-YPGAELAVDGVPTTQVTLVGQVRSVAPQAINVVYRLDDGTGVID 194
Query: 102 CKRWASEVFDTREMEAIQD---GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYI 158
K+W D + +++Q G YVR+ G L+SF K+Q+ A +R + +F+EV H +
Sbjct: 195 VKKW----IDAEKPDSVQQFAPGTYVRVFGRLQSFNNKRQVSAHYIRAIEDFNEVNYHLL 250
Query: 159 ECIYFHLQNSKSQVQGF-PSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDC 217
E Y HL +K G Q DS G +++ Q +
Sbjct: 251 EATYVHLALTKGPAGGAGQQHQDDGGDSMFVDGGYGAAGGGGDGGGSVAMQARLGSCSRN 310
Query: 218 DQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ + +YL ++ GVH+N+++ + K IM + L +GLIY+T D+
Sbjct: 311 AKTVFNYLANAPGTD---GVHLNQVASGTGLSAKDIMAATEELLGQGLIYTTQDD 362
>gi|159483541|ref|XP_001699819.1| replication protein A 30 kDa subunit [Chlamydomonas reinhardtii]
gi|158281761|gb|EDP07515.1| replication protein A 30 kDa subunit [Chlamydomonas reinhardtii]
Length = 292
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 29/284 (10%)
Query: 13 FSGGGFMPSQPP-----QSADYPSSTARSRDSQGLVPVTVK-MISEASHSGDDKSNFMIN 66
F GGGFMPS P + L T++ ++ E + + DD+ +
Sbjct: 14 FGGGGFMPSPAPGHDNQYGGGGGGQQKGRNQNNSLRAFTIRHLLKETASTEDDR--VKAD 71
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEA-----IQDG 121
G EI+ VT++G V + E ++ V L DGT + W D +M+A Q G
Sbjct: 72 GHEISTVTILGKVTSYRELSTRVQLQLHDGTASMEVCSW----VDDADMQAQKPVEWQVG 127
Query: 122 MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP- 180
YVR+ GNLK+F+GK+ + AF+V+PVT+ +EVT H+++C+ HL +K P+ QP
Sbjct: 128 KYVRVYGNLKTFEGKRSLTAFAVKPVTDHNEVTYHFLQCVMQHLHLTKGTP---PTGQPL 184
Query: 181 --QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+ + +T A T G + D + P + G+
Sbjct: 185 PGKAAPAFGSTPAATAPYGAAGGYGGAAPAAAAPAGGDIHSDLKAVYNLPHAMAAPNGLS 244
Query: 239 VNELSEQLK------IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
V +L+ +++M + L EG++YST+++ +K
Sbjct: 245 VEAAHAELQRMGRAHYNLQQVMQACEYLAAEGVLYSTVNDTTFK 288
>gi|154299714|ref|XP_001550275.1| hypothetical protein BC1G_11483 [Botryotinia fuckeliana B05.10]
Length = 289
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 5/232 (2%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K I EA D ++F I+G E+T ++ VG V++ +A++ + +DDGTG +
Sbjct: 54 LRPVTIKQILEAVQPHPD-ADFKIDGSEVTQLSFVGQVHSISTQATNNTYKVDDGTGLIE 112
Query: 102 CKRWASEVFDTREMEAI-QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
K+W + ++G Y+ + G LKSF K+ + A +RPV + +EVT H +E
Sbjct: 113 VKQWIDNDASPENARPVPEEGKYIHVWGRLKSFHDKRHVGAHIIRPVLDMNEVTFHGLEA 172
Query: 161 IYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQM 220
HL ++ V + + + + G G A T ++ +M
Sbjct: 173 TLAHLYFTRGPVDTAGTMAKKEGGDGMFVDSYGGNMGAGDASTGGGKILPAKVSRNS-RM 231
Query: 221 ILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ D LQ S + G++VN ++ +L +P + L EG IY+T+D+
Sbjct: 232 VFDLLQ--SEPQNNEGLNVNMIATKLGMPVADVYKCGDELLAEGCIYTTVDD 281
>gi|46136417|ref|XP_389900.1| hypothetical protein FG09724.1 [Gibberella zeae PH-1]
Length = 275
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 20/276 (7%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMI--SEASHSGDD 59
F+ + + A GGF Q + A +S L PVT+K I +E +++G D
Sbjct: 7 FTKTSYGAQGGDDSGGFFAGGSQQGSQGGGGKAYQDES--LRPVTIKQILDAEEAYAGAD 64
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEA-I 118
F I+G +T +T +G V + + + +++ +DDGTG++ K+W +V + EA
Sbjct: 65 ---FKIDGSPVTQITFIGQVRSVQPQPTNITLKIDDGTGQIEVKKWI-DVDKADDSEAGF 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
+ ++R+ G LKSF K+ + A +RPV++F+EV H +E Y HL +K + G
Sbjct: 121 ELDSHIRIWGRLKSFNNKRHVGAHVIRPVSDFNEVNYHMLEATYVHLYFTKGPLGGQGGG 180
Query: 179 QPQMVDSSLNTSARTGLSGYQ-TAPTNLSSQFGVDGLKDCDQMILDYL-QQPSSSERERG 236
++ GY A N +S + G + + ++ QP +E G
Sbjct: 181 ANGDDGMFVDG------GGYNDNAGGNTNSHSKLAGCSPLAKKMFKFMSDQPGGNE---G 231
Query: 237 VHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
VHVN ++ + + + + L +GLIY+T+D+
Sbjct: 232 VHVNIITSSTGMSVRDALTASDELLGQGLIYTTVDD 267
>gi|443925920|gb|ELU44677.1| OB-fold nucleic acid binding domain-containing protein [Rhizoctonia
solani AG-1 IA]
Length = 305
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
+Q L PVT++ I A + D ++++I+ E T +TLV V ++A+++ + L+DGT
Sbjct: 78 NQSLRPVTIRQIYTAEQTHSD-ADYIIDNSETTQITLVAQVVAANKQATNITYKLNDGTA 136
Query: 99 RVVCKRWASEVFDTREMEAIQDG----MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
+ K W + E E I G +Y+R++G LK+F G++QI A R V + E+
Sbjct: 137 EIKAKHW----LENSEEEPIGHGQNEHVYIRVVGTLKTFSGERQINAVHTRLVVDPMEIY 192
Query: 155 CHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGL 214
H IE HL ++ + S ++ S YQ S+F
Sbjct: 193 YHLIEAQLVHLHYTRR----------ANIASGAVSAGAPAASAYQAGGKGQQSKFA--NF 240
Query: 215 KDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQK--KIMDSIASLENEGLIYSTIDE 272
+ IL+ L+Q + E+GVHV ++ L + +I ++ L EG IY+T+D+
Sbjct: 241 PPLQRRILEVLEQL-MPQHEQGVHVTTIANGLNVQASIDEIGATMEKLAEEGHIYATMDD 299
Query: 273 FHYKFA 278
H+ +
Sbjct: 300 EHFAIS 305
>gi|115397283|ref|XP_001214233.1| hypothetical protein ATEG_05055 [Aspergillus terreus NIH2624]
gi|114192424|gb|EAU34124.1| hypothetical protein ATEG_05055 [Aspergillus terreus NIH2624]
Length = 276
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 30/258 (11%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
PS S ++ L P+TVK +A+ + S+ I+G ++++V LVG V N ++++V
Sbjct: 26 PSGGKGSYNNATLRPITVKQALDATQPYPEASH-QIDGADVSSVCLVGQVRNISSQSTNV 84
Query: 90 NFTLDDGTGRVVCKRWA-SEVFDTREMEA-----------IQDGMYVRLIGNLKSFQGKK 137
+ +DDGTG + K+W S DT EM+ ++ Y ++ G L+ F K
Sbjct: 85 TYKIDDGTGEIEVKQWLDSTTADTMEMDEGKGPGAPGKDQVELNAYAKIFGKLRFFGTKL 144
Query: 138 QIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNT--SARTGL 195
+VA SVRP+TN +E+ CH +E + HL ++ G P + SA G+
Sbjct: 145 FVVAHSVRPLTNINELHCHLLEAVAVHLFFTR----GPPGGAGAAAGGAAGAGDSAMGGM 200
Query: 196 SGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQKKIM 254
Y S+ + + + + + L+ +P S+E G+H ++ +L +P +
Sbjct: 201 DDY-------SANKSLPAMSAVARRVYNLLKTEPQSNE---GLHAQLIAAKLSLPMPDVA 250
Query: 255 DSIASLENEGLIYSTIDE 272
+ L G+I+ST+DE
Sbjct: 251 RAGDELLTAGVIFSTVDE 268
>gi|121699890|ref|XP_001268210.1| possible replication factor-a protein [Aspergillus clavatus NRRL 1]
gi|119396352|gb|EAW06784.1| possible replication factor-a protein [Aspergillus clavatus NRRL 1]
Length = 303
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 27/244 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVTVK +AS + S F I+G ++++V +VG V N ++++V + +DDGTG +
Sbjct: 66 LRPVTVKQALDASQPYPEAS-FQIDGADVSSVCVVGQVRNISSQSTNVTYKIDDGTGEIE 124
Query: 102 CKRW------------ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
K+W S+V DT++ + +G Y ++ G +KSF KK I A SVRPVT+
Sbjct: 125 AKQWIDSQSSDTMETDESKVADTKKPQVELNG-YAKVFGKIKSFGNKKYIGAHSVRPVTD 183
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV CH +E HL F P + TG + ++
Sbjct: 184 INEVHCHLLEAAAVHL--------FFTRGPPGGGAAGGAAGDETGADATMGGADDFGNR- 234
Query: 210 GVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYS 268
+ + + + L+ +P S+E G+H ++ +L +P + + L G+I+S
Sbjct: 235 ALPAMSPVARRVYSLLKTEPQSNE---GLHAQLIAAKLNLPMPDVARAGEELLTAGVIFS 291
Query: 269 TIDE 272
T+DE
Sbjct: 292 TVDE 295
>gi|413939583|gb|AFW74134.1| hypothetical protein ZEAMMB73_174168 [Zea mays]
Length = 172
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 87/140 (62%), Gaps = 11/140 (7%)
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
++GMY+ +IG+LK Q +K+ AFS+RP+T+F+EVT H+I+C+ H++N++ +
Sbjct: 30 RNGMYIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTE-----LKAG 84
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG--VDGLKDCD--QMILDYLQQPSSSERE 234
P ++SS+ S G S T PT+L S G D D +L++ +P++ E E
Sbjct: 85 SPARINSSMGVSFSNGFSESST-PTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESE 143
Query: 235 RGVHVNELSEQLK-IPQKKI 253
GVHV+E+ ++ K +P+K+I
Sbjct: 144 HGVHVDEVLKRFKLLPKKQI 163
>gi|71014541|ref|XP_758726.1| hypothetical protein UM02579.1 [Ustilago maydis 521]
gi|46098516|gb|EAK83749.1| hypothetical protein UM02579.1 [Ustilago maydis 521]
Length = 285
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 132/251 (52%), Gaps = 14/251 (5%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
S + + + L PVT++ I A D + F+++G E+ +T V +V N A++V
Sbjct: 37 SPSGKKAGNNTLRPVTIRQILNAEQPHPD-AEFILDGAELGQLTFVAVVRNISRNATNVA 95
Query: 91 FTLDDGTGRVVCKRW-ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
++++DGTG++ ++W S D+ + I++ +YVR++G LKSFQ ++ I + +RPV +
Sbjct: 96 YSVEDGTGQIEVRQWLDSSSDDSSKASEIRNNVYVRVLGTLKSFQNRRSISSGHMRPVID 155
Query: 150 FDEVTCHYIECIYFHLQNSK----SQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTN- 204
++EV H +E ++ HLQ ++ S ++G S+ L ++ SG + N
Sbjct: 156 YNEVMFHRLEAVHAHLQATRGPTASALKGATSTALFNQAGGLESNDMNAYSGSKKQDVND 215
Query: 205 LSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENE 263
L G + Q I+ + + S + + GVHV+ ++ L + + ++ L ++
Sbjct: 216 LYKNLG-----ELPQQIMSIVTRESQNHPD-GVHVSLIARLLNGVDVNDVKSAVEDLSSD 269
Query: 264 GLIYSTIDEFH 274
G +Y+ D+ H
Sbjct: 270 GYLYTAADDNH 280
>gi|410966579|ref|XP_003989808.1| PREDICTED: replication protein A 32 kDa subunit [Felis catus]
Length = 270
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 134/266 (50%), Gaps = 26/266 (9%)
Query: 14 SGGGF-MPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
S GGF MP+ P A+ S R+R +Q +VP T+ + A+ + F I +EI+
Sbjct: 23 SPGGFGMPT--PSQAEKKS---RAR-AQHIVPCTISQLLSATLVDE---VFRIGKVEISQ 73
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLK 131
VT+VG++ + E+ +++ + +DD T + ++W + E + YV++ G+L+
Sbjct: 74 VTIVGIIRHAEKAPTNIVYKVDDMTAAPMDVRQWVDTDDASSENTVVPPETYVKVAGHLR 133
Query: 132 SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSA 191
SFQ KK +VAF + P+ + +E T H +E + H+ SK+ Q + + + + + +
Sbjct: 134 SFQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMILSKANSQPL-AGRATISNPGMGEAG 192
Query: 192 RTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQ 250
G G P N GL +L ++ + R G++ +L QL+ +
Sbjct: 193 NFG--GNSAIPAN--------GLTVAQNQVLSLIK---ACPRPEGLNFQDLKNQLQHMSV 239
Query: 251 KKIMDSIASLENEGLIYSTIDEFHYK 276
I ++ L NEG IYST+D+ H+K
Sbjct: 240 ASIKQAVDFLSNEGHIYSTVDDDHFK 265
>gi|440639394|gb|ELR09313.1| hypothetical protein GMDG_03881 [Geomyces destructans 20631-21]
Length = 286
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 11/148 (7%)
Query: 32 STARSRDSQG---------LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNK 82
S A S+D+ G L PVT+K I +A D + F ++G E+T +T VG V
Sbjct: 32 SQAGSQDTPGGSKTYGKDTLRPVTIKQIIDAQQPHPD-AEFKVDGHEMTQITFVGQVRAI 90
Query: 83 EERASDVNFTLDDGTGRVVCKRWAS-EVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVA 141
+A++ F LDDGTG + K W + + + +I++ YVR++G LK+F KK + A
Sbjct: 91 SVQATNQTFKLDDGTGLIEVKVWLDVDAGPSPIISSIKENTYVRVLGRLKAFNNKKHVAA 150
Query: 142 FSVRPVTNFDEVTCHYIECIYFHLQNSK 169
VRPVT+F+E+ H +E Y HL S+
Sbjct: 151 HVVRPVTDFNEINAHLLEATYVHLYFSR 178
>gi|241951792|ref|XP_002418618.1| replication factor A protein 2, putative [Candida dubliniensis
CD36]
gi|223641957|emb|CAX43921.1| replication factor A protein 2, putative [Candida dubliniensis
CD36]
Length = 268
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 139/272 (51%), Gaps = 24/272 (8%)
Query: 13 FSGGGFM-PSQPPQSADYPSSTAR---SRDSQGLVPVTVKMISEASHSGDDKSNFMINGL 68
+ GGGF SQ + ++ S+ R ++ Q L PVT+K I++A+ D + F +N +
Sbjct: 9 YHGGGFNNTSQGGFTTEHAGSSQRQTATQVRQSLTPVTIKQINDATQPVPD-AEFKVNNV 67
Query: 69 EITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEA-----IQDGMY 123
E+ ++ VG+V E + ++ T++DGTG + ++W E T + E ++D Y
Sbjct: 68 ELNMISFVGVVRKVENMNASISVTIEDGTGSIDVRKWVDEAISTADEECQKYSELKD-KY 126
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
V + G+LK F +K + S+ P+T+ +++ H++ I HL + QG ++
Sbjct: 127 VFVGGSLKQFSNRKTVQNASISPITDSNQIVYHHLSAIEHHL-----KAQGISTTGAGGQ 181
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELS 243
++ TSA +GL + PT S G + D +L + SS+ + GV V+ +
Sbjct: 182 TTNATTSAGSGL--FVDNPTTHSK--GTGSMTDQVFAVL----KESSNTMQAGVPVDYII 233
Query: 244 EQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
E+L I +++ + + L EG +++ D+ Y
Sbjct: 234 EKLNITKEECLLHVGKLLEEGKVFAGYDDNAY 265
>gi|389748920|gb|EIM90097.1| replication protein A subunit RPA32 [Stereum hirsutum FP-91666 SS1]
Length = 295
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 17/257 (6%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R SQ L P+T+K I ++ + D ++++ EI +T+V V + + ++ +T+D
Sbjct: 42 RGALSQSLRPMTIKQIGASTQAHAD-ADWIWENTEIGQITVVAQVLTIKAQTTNCVYTID 100
Query: 95 DGTGRVVCKRWASEVFDTR--EMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
DGT ++ + W+ + + I++ Y R+ G +K++ KK I ++RP + E
Sbjct: 101 DGTDQIDARFWSDSTNENEGDDSSTIKELQYARITGTIKTYNDKKYINCINIRPAKDSHE 160
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSS-LNTSARTGLSG---------YQTAP 202
+ H E + L + + V+ P SQP + L S SG TA
Sbjct: 161 IYFHLSEAMAVTLFHERGSVRFPPKSQPAVAHVCILQPSGAQAPSGAGQSTNSNSAYTAQ 220
Query: 203 TNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQKKIMDSIASLE 261
T++ + L C++ I ++ QP E G+HV+ ++ + I ++ +L
Sbjct: 221 TSIPADDQYAHLPPCEKAIAYFMHTQP---RHEEGIHVSNIARNVPFQAPDIGSALEALM 277
Query: 262 NEGLIYSTIDEFHYKFA 278
+ G++YSTIDE HY +
Sbjct: 278 DHGILYSTIDETHYALS 294
>gi|449488922|ref|XP_002190972.2| PREDICTED: replication protein A 32 kDa subunit, partial
[Taeniopygia guttata]
Length = 259
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 20/244 (8%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
RSR SQ +VP TV + A + F I +EI+ VT+VG+V + E+ +++ + +D
Sbjct: 29 RSR-SQNIVPCTVSQLLAAEQVDE---TFRICDVEISQVTVVGIVRHAEKAPTNILYKVD 84
Query: 95 DGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
D T + ++W E + G YV++ G+L+SFQ KK +VAF + P+ N +E
Sbjct: 85 DMTAAPMDVRQWVDTDEAGGENVVVPPGTYVKVAGHLRSFQNKKSLVAFKIMPLENMNEF 144
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
T H +E + H+ K+ + S PQ S TG+S S V+G
Sbjct: 145 TTHILEIVNAHMILRKNLMSA--SRGPQSFSS-------TGISDMGGYGGGGS--LPVNG 193
Query: 214 LKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDE 272
L +L+ ++ S G+ + +L QL + I ++ L +EG IYST+D+
Sbjct: 194 LTAHQSQVLNLIK---SCHVPEGMSLQDLKLQLHNMSMSTIKQAVEFLSSEGHIYSTVDD 250
Query: 273 FHYK 276
HYK
Sbjct: 251 DHYK 254
>gi|346977188|gb|EGY20640.1| replication factor-A protein [Verticillium dahliae VdLs.17]
Length = 294
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 24/249 (9%)
Query: 42 LVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
L P T+K I +E ++ G D F I+G +T VT +G V +A+++ + LDDGT
Sbjct: 44 LRPATIKQILDAEEAYPGAD---FKIDGATVTQVTFIGQVRAINPQATNITYKLDDGTAT 100
Query: 100 VVCKRWA-SEVFDTREMEAIQDG----------MYVRLIGNLKSFQGKKQIVAFSVRPVT 148
+ K+W ++ D M+ + G +YVR+ G +KSF GK+ + A +R VT
Sbjct: 101 LEVKKWVDTDKKDDDLMDGVAGGPGSGSGVDLDVYVRVWGRIKSFNGKRHVGAHFLRAVT 160
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPS---SQPQMVDSSLNTSARTGLSGYQTAPTNL 205
+F+EV H +E Y HL +K + G + VD N + + + ++
Sbjct: 161 DFNEVNYHLLESTYVHLFFTKGPLGGVKAEDNGAGMFVDGGNNNNKNNNSNIGNSHASHA 220
Query: 206 SSQ-FGVDGLKDCDQMILDYL-QQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENE 263
+ Q V Q + ++L P +E GVH+N ++ + + I+ + L +
Sbjct: 221 TGQSIKVAQCTPMGQKMYNFLVNAPGGNE---GVHMNVIASGAGMSMRDILGAADELLGQ 277
Query: 264 GLIYSTIDE 272
GL+Y+TID+
Sbjct: 278 GLVYTTIDD 286
>gi|452978781|gb|EME78544.1| hypothetical protein MYCFIDRAFT_190791 [Pseudocercospora fijiensis
CIRAD86]
Length = 254
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 23 PPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNK 82
P + +S RS L PVT+K + +A H D +FMI+ E T VT V V N
Sbjct: 2 PGSQGEGSASNKRSYGKDTLRPVTIKQLIDAHHPHPDAEHFMIDDSETTQVTFVAQVRNI 61
Query: 83 EERASDVNFTLDDGTGRVVCKRWA---SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQI 139
+ ++V + LDDGTG + K W + D + + ++ G Y R+ G LK F K+ +
Sbjct: 62 STQTTNVTYKLDDGTGTIEVKVWVDAETAAMDDGKPKVVEQG-YARVWGRLKEFNNKRHV 120
Query: 140 VAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
A +RP+T+ +E++ H +E HL +K V+
Sbjct: 121 GALFIRPITDMNEISYHLLEATVIHLHYAKGPVE 154
>gi|443734421|gb|ELU18419.1| hypothetical protein CAPTEDRAFT_104212, partial [Capitella teleta]
Length = 217
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 125/246 (50%), Gaps = 38/246 (15%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R+R +Q ++PVTV + A +GD N + + +E+ V+++G+V + E + + + +D
Sbjct: 1 RTR-AQNVIPVTVAQVLAAQQNGD---NLIWDEIELHQVSILGIVRSVNENPTRLEYFID 56
Query: 95 DGTGRVVCKRW---ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFD 151
D T R + R A E + + ++ YV++ G ++ FQGK+ I AF + V + +
Sbjct: 57 DLTARPLEVRQFVDADENAPEDKTDIARENQYVQVFGTIRDFQGKRSINAFKILQVADAN 116
Query: 152 EVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGV 211
+T H +E I+ HL K+++ G +N L GY +SQ
Sbjct: 117 TITTHLLEVIHAHLALKKAKIAG----------QYINNINMCSLFGYA------NSQRVH 160
Query: 212 DGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTI 270
+ ++ C + ++G+ V+ +++ L+ IPQK I D+I L EG IYST+
Sbjct: 161 NVIRACSE--------------DQGMSVHTITDNLRGIPQKAIRDAIEFLSAEGHIYSTV 206
Query: 271 DEFHYK 276
D+ HY+
Sbjct: 207 DDEHYR 212
>gi|417398120|gb|JAA46093.1| Putative single-stranded dna-binding replication protein a rpa
medium 30 kd subunit [Desmodus rotundus]
Length = 269
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 33/282 (11%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+ SS F + + S GGF P Q+ +R+R +Q +VP T+ + A+ +
Sbjct: 9 YGSSTFGGAGGYTQSPGGFGSPTPSQA----EKKSRAR-AQHVVPCTISQLLSATLVDEV 63
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ V ++G++ + E+ +++ + +DD T + ++W + E +
Sbjct: 64 ---FRIGNVEISQVVIIGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDASGENTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ---VQGF 175
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ +++
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIMPLDDMNEFTAHILEVVNAHMMLTRANQPSAGRA 180
Query: 176 PSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERER 235
P S P M ++ G P N GL +L+ ++ + R
Sbjct: 181 PISNPGMGEAG-------NFGGNSFIPAN--------GLTVAQNQVLNLIK---ACPRPE 222
Query: 236 GVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
G++ ++L QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 223 GLNFHDLKNQLQHMTVASIKQAVDFLSNEGHIYSTVDDDHFK 264
>gi|212539830|ref|XP_002150070.1| possible replication factor-a protein [Talaromyces marneffei ATCC
18224]
gi|210067369|gb|EEA21461.1| possible replication factor-a protein [Talaromyces marneffei ATCC
18224]
Length = 292
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 24/273 (8%)
Query: 18 FMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVG 77
FMP + + P+ R ++ L PVT+K I EA+ + ++ F I+G +I +V +G
Sbjct: 24 FMPGE----VNSPAG-GRQGENPTLRPVTIKQILEATQA-HPEAPFQIDGADIGSVYCIG 77
Query: 78 LVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM--------------Y 123
V N +++++ + LDDGTG + K+W E + DG +
Sbjct: 78 QVRNISTQSTNITYKLDDGTGEIEAKQWVDSTTARIEDDMDVDGQGVKHSTRKKVELNGF 137
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
V++ G +K F K+ + A +VRPV++ +E+ H++E HL Q + +
Sbjct: 138 VKVFGKVKVFGNKRFLGAHNVRPVSDVNEIHVHFLEATAIHLFFKHGPPQKGTDTNGAVS 197
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNEL 242
S + G+ G + + + + + + L+ +P S+E G+H+ +
Sbjct: 198 GSGFGGNTAGGMKGDDDYSGAAAGGRPLPPMSASARRVYNLLKNEPQSNE---GLHMQNI 254
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
S +L +P +++ + L + GLI+ST+DE+ +
Sbjct: 255 SAKLGLPSTEVVKAGDELLSAGLIFSTMDEYTW 287
>gi|440909265|gb|ELR59190.1| Replication protein A 32 kDa subunit [Bos grunniens mutus]
Length = 270
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 30/278 (10%)
Query: 9 ASNAFSGGGFMPSQPPQSADYPSSTARSRD---SQGLVPVTVKMISEASHSGDDKSNFMI 65
++++F G G P +S A + +Q +VP T+ + A+ + F I
Sbjct: 10 STSSFGGVGGYTQSPGGFGSLTASQAEKKSRAQAQHIVPCTISQLLSATLVDEV---FSI 66
Query: 66 NGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYV 124
+EI+ VT+VG++ N E+ +++ + +DD T + ++W E + YV
Sbjct: 67 GNVEISQVTIVGIIRNAEKATTNIVYKIDDMTAAPMDVRQWVDTDDANSENTVVPPETYV 126
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQP 180
++ GNL+SFQ K +VAF + P+ + +E T H +E + H+ SKS P S P
Sbjct: 127 KVAGNLRSFQNNKSLVAFKIMPLEDMNEFTTHILEVVNAHMMLSKSNSHPSAGRVPISNP 186
Query: 181 QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN 240
M ++ G P N GL +L+ +Q + R ++
Sbjct: 187 GMGEAG-------NFGGNNFIPAN--------GLTVAQNQVLNSIQ---ACLRPVRLNFQ 228
Query: 241 ELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYKF 277
+L QL+ + I ++ L NEG IYST+D+ H+KF
Sbjct: 229 DLKNQLQHMSVASIKLAVDFLSNEGHIYSTVDDDHFKF 266
>gi|427778005|gb|JAA54454.1| Putative replication protein a 32 kda subunit [Rhipicephalus
pulchellus]
Length = 238
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 131/238 (55%), Gaps = 28/238 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
+VP T I++ G D + I LE+ V+LVGLV + +++++ VNFTLDD TG +
Sbjct: 21 VVPCT---IAQIHMMGQD--SLTIGDLEVQYVSLVGLVTSVDQQSTRVNFTLDDRTGPPI 75
Query: 102 CKR-WASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
+A E R + + +G YVR++G ++S +GK+Q+ AF V PVT+ +E+T H E
Sbjct: 76 EGLIFAQEEEQLRVLSHLVEGSYVRVVGPVRSAEGKRQLKAFKVFPVTDLNELTLHLAEV 135
Query: 161 IYFHLQNSKSQVQGFPSS-QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQ 219
++ N +V PSS + + +D+S N+ L + G GL +
Sbjct: 136 VH---ANMALRVGFTPSSVKHEPMDTSTNSF--------------LGAAAGNLGLNQQQK 178
Query: 220 MILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++ + +++ +++ G+ +E+ +LK + + I D + L NEG I++T+D+ HYK
Sbjct: 179 LVYEVIRECTTN---IGIGFDEICSRLKSMNKNTIRDVVEFLANEGHIFTTMDDEHYK 233
>gi|388582046|gb|EIM22352.1| replication protein A, subunit RPA32 [Wallemia sebi CBS 633.66]
Length = 272
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 25/261 (9%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGG+ S P + R+++ L PVT+K + AS D F I G +IT+V+
Sbjct: 28 GGGYTDSSP---------STRNKNEDTLRPVTIKQVLGASQPHSDFP-FQIEGRDITHVS 77
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSF 133
+V +V + ++A+ ++L+DGTG + + W S ++ IQ YVR+IG LKSF
Sbjct: 78 IVAVVRSASKQATSAVYSLEDGTGTLDVRYWMDSSGGESESTTDIQQNQYVRVIGALKSF 137
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSART 193
K QI A V+P+T+F E+ H E + LQ K S+P +TS
Sbjct: 138 HDKLQITAQVVKPITDFHEIFYHKAEALAVTLQIRKGTDTIMNESKPSATYGQESTSEPN 197
Query: 194 GLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKI 253
+ Y T P L ++ D+ +GVHV ++++ + +
Sbjct: 198 YMRPYLTFP-ELHKSVMKAVFEEVDR-------------SPQGVHVARIAQRCPKGDEAL 243
Query: 254 MDSIASLENEGLIYSTIDEFH 274
++I L +EG +++ D+ H
Sbjct: 244 TEAIEYLISEGHLFTGEDDEH 264
>gi|320036333|gb|EFW18272.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 297
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 28/262 (10%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
S + ++ + L PVT+K +++A+ + D ++F I+ E+ V+ VG + N + ++ +
Sbjct: 37 SQSGKTYNKSSLRPVTIKQLNDATQAYSD-ADFKIDDTEVAQVSFVGQIRNISQLSTFIT 95
Query: 91 FTLDDGTGRVVCKRW-------ASEVFDTRE--------MEAIQDGMYVRLIGNLKSF-Q 134
+ LDDGTG + K+W + DT + E + +G Y ++ G L SF
Sbjct: 96 YKLDDGTGEIEVKKWLDNEERHEGDAMDTSDPTTGRTGKKELVVNG-YAKVWGKLGSFSN 154
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTG 194
++ + A +RP+TN DE CH++E HL F P DS+ + A+T
Sbjct: 155 NRRSVTAHVIRPLTNMDEYHCHFLEATAIHLY--------FKHGPPPSKDSADASKAQTS 206
Query: 195 LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERER-GVHVNELSEQLKIPQKKI 253
SG N S G L M +++ + R G+H+ L+ ++ P +
Sbjct: 207 DSGGAMRSDN-SMAAGERTLPPMSPMARKLFNTLNNTPQSREGLHLQHLASLMQAPVDNV 265
Query: 254 MDSIASLENEGLIYSTIDEFHY 275
+ L + LIY T+D++ +
Sbjct: 266 EKAARELNDLSLIYPTVDDYTW 287
>gi|342879431|gb|EGU80679.1| hypothetical protein FOXB_08820 [Fusarium oxysporum Fo5176]
Length = 277
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 30/282 (10%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMI--SEASHSGDD 59
F+ + + A GGF Q + + +S + L PVT+K I +E +++G D
Sbjct: 7 FTKTSYGAQGGDDSGGFFAGGSQQGS-QGGAGGKSYQDESLRPVTIKQILDAEEAYAGAD 65
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ 119
F I+G +T +T VG + + + +++ +DDGTG + K+W D + +
Sbjct: 66 ---FKIDGSPVTQITFVGQIRKIQPQPTNITLNIDDGTGMIEVKKW----IDVDKQDDAD 118
Query: 120 DGM----YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQV--- 172
G +VR+ G LKSF K+ + A +RPV +F+EV H +E Y HL +K +
Sbjct: 119 PGFELESHVRIWGRLKSFNNKRHVGAHVIRPVADFNEVNYHMLEATYVHLYFTKGPLGGQ 178
Query: 173 -QGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQ-PSS 230
VD G + APT L+ G GL + + +++ P
Sbjct: 179 GGSNGDGDSMFVDGGGYNDNGGGNA--GQAPTKLA---GCSGLA---KKMFNFMNDTPGG 230
Query: 231 SERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+E GVH+N ++ + + + + L +GLIY+T+D+
Sbjct: 231 NE---GVHLNVITNSTGMSVRDALTAADELLGQGLIYTTVDD 269
>gi|255717472|ref|XP_002555017.1| KLTH0F19118p [Lachancea thermotolerans]
gi|238936400|emb|CAR24580.1| KLTH0F19118p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 44/281 (15%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQG-LVPVTVKMISEASHSGDDKSNFMINGLEITN 72
SGGGF SQ S+ P+S S L PVT+K + E+ D F++N LE+ +
Sbjct: 14 SGGGFDNSQ---SSGRPNSGNGGSGSSSTLTPVTIKQVQESKQIVQDGP-FVVNNLELHH 69
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREM-EAIQD----------- 120
V+ VG+V N + S++N T++DGTG++ ++W+ D+ +M A QD
Sbjct: 70 VSFVGVVRNVVDNTSNINLTIEDGTGQIEVRKWSD---DSNDMANAAQDEQPDAAESSQV 126
Query: 121 ------GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFH-LQNSKSQVQ 173
G YVR+ G L+ F GKK + ++P+ NF+EV HY+E + +H + N K ++
Sbjct: 127 AQMYEVGTYVRVFGALREFSGKKNVQFAVIKPIDNFNEVITHYLEAMKWHAIANGK--LE 184
Query: 174 GFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYL--QQPSSS 231
+ QP S +TG N +S+ K IL++ Q
Sbjct: 185 SPVNLQP--------NSEQTGEEQNLFVQDNSASE-----PKTALHKILEFCTAQCEGKD 231
Query: 232 ERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
VH +++ L + + + +L ++G IY T D+
Sbjct: 232 ASSFAVHTKLIAQSLALSEPDVKMYCQTLVDQGFIYPTFDD 272
>gi|448107403|ref|XP_004205356.1| Piso0_003600 [Millerozyma farinosa CBS 7064]
gi|448110394|ref|XP_004201620.1| Piso0_003600 [Millerozyma farinosa CBS 7064]
gi|359382411|emb|CCE81248.1| Piso0_003600 [Millerozyma farinosa CBS 7064]
gi|359383176|emb|CCE80483.1| Piso0_003600 [Millerozyma farinosa CBS 7064]
Length = 254
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 113/236 (47%), Gaps = 24/236 (10%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K I+EA+ D F +N +++ V+ VG+V N + S V T++DGTG +
Sbjct: 38 LTPVTIKQITEATQPIPD-GEFQVNNVDLNLVSFVGVVRNVNDITSAVLITIEDGTGSIE 96
Query: 102 CKRWASEVFDTREMEA--IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIE 159
+RW E + E EA + YV + G LK F GKK + ++R +T+ +EV H++
Sbjct: 97 VRRWIDESTNASESEAQKYELNKYVYVTGALKEFNGKKNLQHATIRGITDHNEVVYHHLN 156
Query: 160 CIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQ 219
I HL++ QG S R G SG + G+D
Sbjct: 157 AIAHHLKS-----QGL--------------STRPGTSGGDNGLF-VKDSNGMDLPGSLQD 196
Query: 220 MILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
I ++ +SS +E GV V +S +L +M+ + L NEG IYS D+ Y
Sbjct: 197 RIFSVIRDNTSSMQE-GVPVPFISSKLNTTDDVVMELCSELINEGKIYSGYDDSAY 251
>gi|384500902|gb|EIE91393.1| hypothetical protein RO3G_16104 [Rhizopus delemar RA 99-880]
Length = 241
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 37/267 (13%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGG+M + S + + Q L PVT+K I A + I+ + T VT
Sbjct: 3 GGGYMNNSFEGSGNEGGFARKPMSEQTLRPVTIKQIRTAEAPAGE-GICKIDKADCTQVT 61
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRW---ASEVFDTREMEAIQDGMYVRLIGNLK 131
VG++ N E ++ +T++DGTG ++W + + A+ +YVR+ G L
Sbjct: 62 FVGIIRNIHELQMNMVYTIEDGTGSTDVRKWIEQNETEEEAEDRRALVRDIYVRVYGRLN 121
Query: 132 SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSA 191
F + + AFS+RP+ +F+E+T H+++ I H+ SK PS + + + TS
Sbjct: 122 YFNNRVSVAAFSIRPIVDFNEITYHFLDAINAHVIFSK------PSKKNSLF---VETSN 172
Query: 192 RTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKI--P 249
R ++ + +D LKD + E GV ++ + E+L+
Sbjct: 173 R---------GNSIVADRIMDILKDQHHL-------------EDGVTLDFIIEKLRTLYT 210
Query: 250 QKKIMDSIASLENEGLIYSTIDEFHYK 276
+ ++ ++ +ENEG +Y+TID+ HYK
Sbjct: 211 EDEVRTAMQHIENEGQVYTTIDDSHYK 237
>gi|387018042|gb|AFJ51139.1| Replication protein A 32 kDa subunit [Crotalus adamanteus]
Length = 266
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 132/265 (49%), Gaps = 28/265 (10%)
Query: 21 SQPPQSADYPSST-----ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTL 75
+Q P PS+T +RSR SQ +VP TV + A D F + +E++ V +
Sbjct: 16 TQSPGGFTSPSATQGERKSRSR-SQNIVPCTVSQLFSAEQVDD---VFRVREVELSQVII 71
Query: 76 VGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQ 134
VG++ + E+ +++ + +DD T + ++W + E + G YV++ G+L+SFQ
Sbjct: 72 VGIIRHAEKAPTNILYKVDDMTAAPMDVRQWVDTDEEGSENVVVPPGTYVKVAGHLRSFQ 131
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ--PQMVDSSLNTSAR 192
KK +VAF + P+ + +E T H +E + H+ KS P S PQ TS+
Sbjct: 132 NKKSLVAFKIMPLEDMNEFTTHLLEVVNAHMVLRKSNT---PQSSKIPQSF-GVFETSSM 187
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQK 251
+ G + + GL +L+ ++ ++E G+ +++L QL I +
Sbjct: 188 SNAGG--------NDSLTMHGLTPHQSQVLNLIKSCMTTE---GISLHDLKSQLHNINLQ 236
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
+ ++ L +EG IYSTID+ H+K
Sbjct: 237 TLKKAVEFLSSEGHIYSTIDDEHFK 261
>gi|299753376|ref|XP_002911864.1| hypothetical protein CC1G_13904 [Coprinopsis cinerea okayama7#130]
gi|298410272|gb|EFI28370.1| hypothetical protein CC1G_13904 [Coprinopsis cinerea okayama7#130]
Length = 265
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 130/252 (51%), Gaps = 22/252 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P +S S L P+T+ +++A+ ++ + ++ +E+ VT+VG + + +++A++
Sbjct: 26 PGGGQKSELSASLRPMTIAQLNKATQL-HPEAEWRLDDIEVGQVTIVGQILSIQQQATNS 84
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+ + DGTG + ++W + D + +++ +YVR+ GNLK+F ++ I +RP+T+
Sbjct: 85 VYAIVDGTGTIEARQWLNTDTDGSIQQGLKENIYVRVAGNLKAFNSRRYINTTHIRPITD 144
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQ----MVDSSLNTSARTGLSGYQTAPTNL 205
E+ H +E + L + V P S M D+S+ Y T
Sbjct: 145 PHELYFHILESMTVTLSFERG-VPAAPGSAKGKDVVMADASV----------YNVGSTAT 193
Query: 206 SSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQ--KKIMDSIASLENE 263
S QF L + I+ +LQ+ S+S + GVHV+ ++ + +KI D++ L +
Sbjct: 194 SDQF--SHLPVLQRQIVRFLQENSTS--DEGVHVSAIARAVGSGNDAQKISDALDKLMDA 249
Query: 264 GLIYSTIDEFHY 275
G +Y+T+DE H+
Sbjct: 250 GHVYTTLDESHF 261
>gi|320170239|gb|EFW47138.1| hypothetical protein CAOG_05082 [Capsaspora owczarzaki ATCC 30864]
Length = 242
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 9 ASNAFSGGGFMPSQP--PQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
A N G G+M Q P AR++ G+ T++ I + + S +N+ ++
Sbjct: 2 AYNTSPGAGYMQQQAGSPHGDGQDKGNARAK---GITSCTIRQILQMAPS--QGNNWRMD 56
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRL 126
G E V +VG++ + +E S + ++DGT ++ K F +++G+Y R+
Sbjct: 57 GAEFAVVKIVGVIRSVQEVTSHRTYLIEDGTSQITAK-----AFGPVNNADLREGVYARI 111
Query: 127 IGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSS 186
G ++ FQ + I ++ P+TNFDE+T H +E I HLQ +K +Q Q S
Sbjct: 112 TGPVREFQNVRSIHPATLHPITNFDEITHHSLEAILTHLQRTKGSLQDRAGGAGQPASSL 171
Query: 187 LNTSARTG-LSGYQTAPTNL---SSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
L + A+TG LS T L S D ++D Q P N
Sbjct: 172 LRSHAQTGDLSSLATQLVTLIGSSPDISFDDIRD---------QFP-----------NAT 211
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFARG 280
+QL+ + + L NEG +Y+T D+ H+K G
Sbjct: 212 PDQLR-------NVLTDLTNEGHVYTTHDDDHFKLTSG 242
>gi|256085911|ref|XP_002579153.1| replication protein A [Schistosoma mansoni]
gi|360044161|emb|CCD81708.1| putative replication protein A [Schistosoma mansoni]
Length = 264
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 150/286 (52%), Gaps = 36/286 (12%)
Query: 1 MFSSSQFDASNAFS---GGGFMPSQPPQSADYPSSTARSRDS-QG-LVPVTVKMISEASH 55
M+SS+ + +S + GGG+M A ++T + + S QG +VP T I A+
Sbjct: 1 MWSSTDYGSSIGTTSDFGGGYM-------ASMGATTGQKKISYQGTIVPCTCAEIMAANQ 53
Query: 56 SGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTR-- 113
GD + G+E + +++VG++ + E ++ V + +DD TG + + +E D
Sbjct: 54 DGDKFVSPC--GIEFSQISVVGIIRSVNESSTRVEYEIDDYTGPCLPVKLFTEDQDNTSS 111
Query: 114 --EMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ 171
+ ++ YVR+ G++++FQG K ++AF V +++ +E+T H +E IY + +K +
Sbjct: 112 GPQSRPFRELSYVRVHGHVRNFQGVKHVIAFRVIHLSDMNELTTHIMEVIYTRMLYTKIK 171
Query: 172 VQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSS 231
Q ++ N + G AP ++S +GL IL ++ +
Sbjct: 172 ---------QDENNGTNVKSNFSEGGSHNAPGSIS-----NGLTVLQNQILAIVR---TF 214
Query: 232 ERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
ERG+ V++L+E+L+ IP+++I + + L EG +YST+D+ H++
Sbjct: 215 VGERGIPVSQLTEKLRGIPERQIREDLDFLSAEGHVYSTVDDDHFR 260
>gi|380490231|emb|CCF36157.1| hypothetical protein CH063_07785 [Colletotrichum higginsianum]
Length = 279
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 35 RSRDSQGLVPVTVKMISEA--SHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFT 92
++ + L PVT+K I +A ++ G D F I+G +T VT V + + +++
Sbjct: 37 KAYSEESLRPVTIKQIIDADEAYPGAD---FKIDGATVTQVTFVAQIRQISPQPTNITLK 93
Query: 93 LDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
LDDGTG + K+W ++ YVR+ G LKSF K+ + A +RPVT+F+E
Sbjct: 94 LDDGTGLIEVKKWVDTDKKDDADANLEVEGYVRVWGRLKSFNNKRHVGAHFIRPVTDFNE 153
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD 212
V H +E Y HL SK V G + + + S +G A N +
Sbjct: 154 VNYHLLEATYVHLYFSKGPVNGAGAGGADGMFVDGDDSYGSGAGAGAGAGGNSGQADKLR 213
Query: 213 GLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTID 271
G Q I +++ P +E GV++N + + + ++ + L GLIY T+D
Sbjct: 214 GCSAAAQKIFNFINNSPGGNE---GVNINRIVSGTGLSAQSVVAAADDLLGNGLIYPTVD 270
Query: 272 E 272
+
Sbjct: 271 D 271
>gi|164659159|ref|XP_001730704.1| hypothetical protein MGL_2158 [Malassezia globosa CBS 7966]
gi|159104601|gb|EDP43490.1| hypothetical protein MGL_2158 [Malassezia globosa CBS 7966]
Length = 280
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 52/270 (19%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R + L PVTV+ + A+ D S F +G E++ VTLV + A+++ +TLD
Sbjct: 39 RRLGTNWLRPVTVRQVLNATQP-DSDSPFEFDGAELSQVTLVAWIRQTNRNATNIQYTLD 97
Query: 95 DGTGRVVCKRWASEVFDT-REMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
DGTG++ ++W D + + +VR++G +KSF K+ I A +V + + +E
Sbjct: 98 DGTGQLDVRQWIDNALDEGAKADEFAPNQFVRVLGEIKSFNNKRNITAATVNKLEDHNEY 157
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD- 212
H ++ IY HLQ K++ G ++ T++SS G+D
Sbjct: 158 LYHQLDVIYTHLQLIKAE-------------------------GMRSTKTDVSSTHGIDA 192
Query: 213 ------GLKDCDQMILDY-----LQQ-------PSSSERERGVHVNEL----SEQLKIPQ 250
++ D M D LQ+ + + GV V ++ S+ + Q
Sbjct: 193 SVYDDSAMQTADSMAADLSSLSPLQRRIYQAIAAEAPDWPEGVDVQQIIKRCSKHADVTQ 252
Query: 251 KKIMDSIASLENEGLIYSTIDEFHYKFARG 280
I D+I L N+G IY D+ HY G
Sbjct: 253 --IQDAIDELANDGYIYQASDDTHYLTTAG 280
>gi|194384978|dbj|BAG60901.1| unnamed protein product [Homo sapiens]
Length = 264
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 36/268 (13%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P Q+ +R+R +Q +VP T+ + A+ + F I +EI+ V
Sbjct: 23 SPGGFGSPAPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDEV---FRIGNVEISQV 74
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
T+VG++ + E+ +++ + + ++W + E + YV++ G+L+SF
Sbjct: 75 TIVGIIRHAEKAPTNIVYA-----APMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSF 129
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSSQPQMVDSSLNT 189
Q KK +VAF + P+ + +E T H +E I H+ SK+ Q P S P M ++
Sbjct: 130 QNKKSLVAFKIMPLEDMNEFTTHILEVINAHMVLSKANSQPSAGRAPISNPGMSEAG--- 186
Query: 190 SARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-I 248
G P N GL +L+ ++ + R G++ +L QLK +
Sbjct: 187 ----NFGGNSFMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLKNQLKHM 231
Query: 249 PQKKIMDSIASLENEGLIYSTIDEFHYK 276
I ++ L NEG IYST+D+ H+K
Sbjct: 232 SVSSIKQAVDFLSNEGHIYSTVDDDHFK 259
>gi|346323105|gb|EGX92703.1| DNA-directed RNA polymerase I subunit RPA1 [Cordyceps militaris CM01]
Length = 1929
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 18/277 (6%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEA--SHSGDD 59
F+ + + A GGFM Q + S ++ L PVTV+ I EA +SG D
Sbjct: 1657 FTKTGYGAQGGDDSGGFMADGSQQGS---QSGGKAYQDDSLRPVTVRQIIEAEEGYSGGD 1713
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ 119
F I+G VT VG + + +A+++ +DDGTG++ K+W + + EA +
Sbjct: 1714 ---FKIDGASAPQVTFVGQIRSVNAQATNITLKIDDGTGQIEVKKWI-DGDKPEDPEAYE 1769
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
YVR+ G LKSF K+ + A +RPVT+F+EV H +E Y HL ++ + G
Sbjct: 1770 LDSYVRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHMLEATYVHLHFTRGPLGGG-GGG 1828
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCD---QMILDYLQ-QPSSSERER 235
Q + T+ + +SQ V L C + + ++L P S+E
Sbjct: 1829 AQQQQNGGATNGDSMFVDGGAGYDGGASQ-NVSKLARCTPGAKKMFNFLSAAPGSNE--- 1884
Query: 236 GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
GV +N ++ + + ++ + L +GLIY+T+++
Sbjct: 1885 GVDINIVTSSTGMSTRDVLTAADELLGQGLIYTTLND 1921
>gi|303313413|ref|XP_003066718.1| OB-fold nucleic acid binding domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240106380|gb|EER24573.1| OB-fold nucleic acid binding domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 295
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 28/262 (10%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
S + ++ + L PVT+K +++A+ + D ++F I+ E+ V+ VG + N + ++ +
Sbjct: 35 SQSGKTYNKSSLRPVTIKQLNDATQAYSD-ADFKIDDTEVAQVSFVGQIRNISQLSTFIT 93
Query: 91 FTLDDGTGRVVCKRW-------ASEVFDTRE--------MEAIQDGMYVRLIGNLKSF-Q 134
+ LDDGTG + K+W + DT + E + +G Y ++ G L SF
Sbjct: 94 YKLDDGTGEIEVKKWLDNEERHEGDAMDTSDPTTGRTGKKELVVNG-YAKVWGKLGSFSN 152
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTG 194
++ + A +RP+TN DE CH++E HL F P D++ + A+T
Sbjct: 153 NRRSVTAHVIRPLTNMDEYHCHFLEATAIHLY--------FKHGPPPSKDAADVSKAQTS 204
Query: 195 LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERER-GVHVNELSEQLKIPQKKI 253
SG N S G L M +++ + R G+H+ L+ ++ P +
Sbjct: 205 GSGGAMRSDN-SMAAGERTLPPMSPMARKLFNTLNNTPQSREGLHLQHLASLMQAPVDNV 263
Query: 254 MDSIASLENEGLIYSTIDEFHY 275
+ L + LIY T+D++ +
Sbjct: 264 EKAARELNDLSLIYPTVDDYTW 285
>gi|327288390|ref|XP_003228909.1| PREDICTED: replication protein A 32 kDa subunit-like [Anolis
carolinensis]
Length = 268
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 133/267 (49%), Gaps = 29/267 (10%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF + P + D S +RS Q +VP TV + A D F + +E++ V
Sbjct: 22 SPGGF--ASPSATQDEKKSRSRS---QNIVPCTVSQLLSAEQVDD---TFRVLDVELSQV 73
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
+VG++ E+ +++ + +DD + + ++W + + + G YV++ G+L+S
Sbjct: 74 LIVGIIRQAEKAPTNILYKVDDMSASPMDVRQWVDTDEEGNDNVVVPPGTYVKVAGHLRS 133
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFH--LQNSKSQVQGFPSSQPQMVDSSLNTS 190
FQ KK +VAF + P+ + +E+T H +E + H L+++ V S+P S
Sbjct: 134 FQNKKSLVAFKIMPLEDMNELTTHLLEVVNAHMILRHAHKFVN---MSEP---------S 181
Query: 191 ARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIP 249
+ TG+ T N + G GL IL +Q +SSE G+ + +L +L I
Sbjct: 182 SVTGMESTSTYEGNNAMPSG--GLTLHQTQILKLIQNCTSSE---GISLEDLKNRLPSIN 236
Query: 250 QKKIMDSIASLENEGLIYSTIDEFHYK 276
+ ++ L +EG IYSTID+ H+K
Sbjct: 237 LPTLKKAVEFLSSEGHIYSTIDDEHFK 263
>gi|451848328|gb|EMD61634.1| hypothetical protein COCSADRAFT_233570 [Cochliobolus sativus
ND90Pr]
Length = 273
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 18/232 (7%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCK 103
PVT+K I +A F I+G I+ +TLVG + N + ++ + LDDGTG + K
Sbjct: 48 PVTIKQIIDAQGEAGSNDTFKIDGTVISQLTLVGQIRNISNQTTNTTYRLDDGTGSIEVK 107
Query: 104 RWAS-EVFDTREMEAIQ--DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
+W + E D + + +G Y R G LKSF +K + A +RP+ + +E++ H +E
Sbjct: 108 QWVNPETVDHSSLAKAKLVEGAYCRAWGKLKSFNDRKSVGATIIRPIEDMNEISYHLLEA 167
Query: 161 IYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQM 220
HL ++ P Q A T +G Q A + G +
Sbjct: 168 TAIHLYFTRG-----PPGQA--------GGATTNEAGKQQAIEGGYGGAELAGYSQAAKR 214
Query: 221 ILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ ++L++ S GV+ E++ +L I + + L GLIY+T+D+
Sbjct: 215 VFNFLREVEQS--NEGVNQYEIASKLGIDAADVAKAGEDLLAGGLIYTTLDD 264
>gi|400597994|gb|EJP65714.1| RNA polymerase Rpb1 [Beauveria bassiana ARSEF 2860]
Length = 1945
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 22/277 (7%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEA--SHSGDD 59
F+ +++ A GGFM Q + S ++ + L PVTVK + EA +SG D
Sbjct: 1677 FTKTRYGAQGGDDSGGFMADGSQQGS---QSGGKAYQDESLRPVTVKQVVEAEEGYSGGD 1733
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ 119
F I+G VT VG + + +A+++ +DDGTG++ K+W + + EA +
Sbjct: 1734 ---FKIDGASAPQVTFVGQIRSVNAQATNITLKIDDGTGQIEVKKWI-DGDKPEDPEAYE 1789
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
YVR+ G LKSF K+ + A +RPV +F+EV H +E Y HL ++ + G Q
Sbjct: 1790 LDSYVRVWGRLKSFSNKRHVGAHVIRPVDDFNEVNYHMLEATYVHLFFTRGPLGGA-GGQ 1848
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCD---QMILDYLQQ-PSSSERER 235
+ ++ G + Y + +S+ L C + + ++L P S+E
Sbjct: 1849 QNGGGAHGDSMFVDGGAAYDGGASQNASK-----LTRCSPGAKKMFNFLSSAPGSNE--- 1900
Query: 236 GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
GV +N ++ + + ++ + L +GLIY+T+++
Sbjct: 1901 GVDINIVTSSTGMSTRDVLTAADELLGQGLIYTTLND 1937
>gi|50425571|ref|XP_461381.1| DEHA2F23892p [Debaryomyces hansenii CBS767]
gi|49657050|emb|CAG89788.1| DEHA2F23892p [Debaryomyces hansenii CBS767]
Length = 260
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 26/270 (9%)
Query: 11 NAFSGGGF---MPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMING 67
N + GGF + + Q+ + S + R S L PVT+K I+EA+ D F ++
Sbjct: 9 NNYGDGGFNTDIGNGGFQNENNGSQKQQLRSS--LTPVTIKQITEATQPIPD-GEFQVHN 65
Query: 68 LEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWA--SEVFDTREMEAIQDGMYVR 125
+ + V+ VG+V N ++ S + T++DGTG + ++W S D E E + Y+
Sbjct: 66 VNLNLVSFVGVVRNVQDITSAILITIEDGTGSIEVRKWIDDSNAMDENEQEKYEMNKYIY 125
Query: 126 LIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDS 185
+ G LK F GKK + ++RP+T+ +E+ H++ I HL + QG + +
Sbjct: 126 VTGALKEFNGKKNLQHATMRPITDHNEILYHHLSAISHHL-----KAQGLSAR----ANG 176
Query: 186 SLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQ 245
N S GL + G+D IL ++ +SS +E GV V +S++
Sbjct: 177 EQNQSQDNGLF--------VKDPHGMDVGTSIQDKILTVIRDNTSSMQE-GVPVPFISQK 227
Query: 246 LKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
L + +++ + L + G IYS D+ Y
Sbjct: 228 LNVTDDLVLEQCSELIDNGKIYSGYDDSAY 257
>gi|425777535|gb|EKV15703.1| putative replication factor-a protein [Penicillium digitatum Pd1]
gi|425779559|gb|EKV17606.1| putative replication factor-a protein [Penicillium digitatum PHI26]
Length = 278
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 23/247 (9%)
Query: 37 RDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDG 96
RD++ L PVTVK + +AS + + F I+G ++ NV +G V N ++++V + +DDG
Sbjct: 36 RDNKTLRPVTVKQVLDASQPFPE-APFQIDGADVANVLFMGQVRNISSQSTNVTYIIDDG 94
Query: 97 TGRVVCKRW----ASEVFDTREMEAIQDGM-------YVRLIGNLKSFQGKKQIVAFSVR 145
TG K+W ++ DT + +A DG + R+ G++KSF K+ I A SVR
Sbjct: 95 TGECEVKKWIDSTTADNMDTDDGKASGDGKTELQLNGFARVFGSIKSFANKRYIGAHSVR 154
Query: 146 PVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNL 205
P++N +E+ H +E HL ++ G + ++ A G A ++
Sbjct: 155 PLSNINELHTHLLEATAVHLFFTRGPPGGTAAGGNAAGGDAVMGGADNYGGGQNKALASM 214
Query: 206 SSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGL 265
S + + + L+ + + + G+H+ ++ +L +P ++ + L G+
Sbjct: 215 SL---------VAKKVYNLLK--TEPQDDTGLHMQVIASKLNMPATEVARAGEELLGAGV 263
Query: 266 IYSTIDE 272
I+ST+DE
Sbjct: 264 IFSTMDE 270
>gi|403213317|emb|CCK67819.1| hypothetical protein KNAG_0A01300 [Kazachstania naganishii CBS
8797]
Length = 287
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 49/290 (16%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGGF + SS R + L PVT+K I E++ D F+ +G E+ +++
Sbjct: 15 GGGFESGGDSRPGTSDSSAVRKMST--LTPVTIKQILESTQEVQDGP-FVSHGQELHHIS 71
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD-------------- 120
VG+V N + S++ T++DG+G++ ++W+ + D +A++D
Sbjct: 72 FVGVVRNITDHTSNIYVTVEDGSGQIEVRKWSDDASDMSAPDAMEDSNGNDGVGSQIAQQ 131
Query: 121 ---GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPS 177
G YV++ G LK F GKK I ++ V +F++V H++E I +H ++ P+
Sbjct: 132 FTIGTYVKVYGALKEFSGKKNIQYAVIKNVESFNDVLTHHLEAIKWHAISTGKLPD--PT 189
Query: 178 SQPQMVDSSL----------NTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQ 227
+ D++ G APT Q++LD+ +Q
Sbjct: 190 GVSPLGDNATSAASGGNSGGXXXXXXXAEGKDVAPT---------------QLVLDFCKQ 234
Query: 228 PSSSERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ V + +S+ L I ++ + + +L +G IY T D+ H+
Sbjct: 235 QCRGKDANSFAVPMQLISQNLNIDEETVRNVCGTLTEQGFIYPTFDDTHF 284
>gi|169608065|ref|XP_001797452.1| hypothetical protein SNOG_07099 [Phaeosphaeria nodorum SN15]
gi|160701551|gb|EAT85750.2| hypothetical protein SNOG_07099 [Phaeosphaeria nodorum SN15]
Length = 281
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R L PVT+K + +A F I+G ++ +T VG + N + ++ + LD
Sbjct: 42 REHTQDSLRPVTIKQLLDAQLEAGSNDTFKIDGSPVSQLTFVGQIRNISTQTTNTTYRLD 101
Query: 95 DGTGRVVCKRWA-SEVFD-TREMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFD 151
DGTG + K+W S+ D T +A + +G Y R G LKSF ++ + A +RPV + +
Sbjct: 102 DGTGSIEVKQWVDSDTVDQTNPTKAKLVEGAYCRAWGKLKSFNDRRSVGAQIIRPVEDMN 161
Query: 152 EVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGV 211
EV+ H +E HL F P ++ +A T G Q + +
Sbjct: 162 EVSYHLLEATSVHL--------FFTRGPPGGANTGTGAAAVTNGGGQQGTGGGDYGGYDL 213
Query: 212 DGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTID 271
L + + +YL+ S+ + G+H + +S QL + + + L GLIY+T+D
Sbjct: 214 RTLTPAARKVFNYLR--STEQSNEGIHQHAISAQLGMDTADVARAGDDLLAGGLIYTTVD 271
Query: 272 E 272
+
Sbjct: 272 D 272
>gi|70992297|ref|XP_750997.1| possible replication factor-a protein [Aspergillus fumigatus Af293]
gi|66848630|gb|EAL88959.1| possible replication factor-a protein [Aspergillus fumigatus Af293]
gi|159124567|gb|EDP49685.1| possible replication factor-a protein [Aspergillus fumigatus A1163]
Length = 289
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 130/269 (48%), Gaps = 32/269 (11%)
Query: 18 FMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVG 77
FMP + + P+ ++ L P+TVK +AS + + F I+G + +V +G
Sbjct: 31 FMPGE----MNSPAGGKGDNNNATLRPITVKQALDASQPYPEAA-FQIDGADAASVCFIG 85
Query: 78 LVYNKEERASDVNFTLDDGTGRVVCKRWA-SEVFDTREMEAIQDGM---------YVRLI 127
V N ++++V + +DDGTG + K+W ++ DT E + + G + ++
Sbjct: 86 QVRNISSQSTNVTYKIDDGTGEIEVKQWIDTQTADTMETDDGKAGTGKNQVELNGFAKVF 145
Query: 128 GNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFP---SSQPQMVD 184
G +KSF K+ + A VRP TN +EV CH +E HL ++ G P ++
Sbjct: 146 GKIKSFGNKRYVGAHCVRPTTNLNEVHCHLLEAAAIHLFFTR----GPPGGGAAGGASGA 201
Query: 185 SSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELS 243
+ +A G + Y T +NL + + + + + L+ +P S+E G+H ++
Sbjct: 202 GANADAAMGGANDYGTGNSNLPA------MSPAARRVYNLLKTEPQSNE---GLHAQLIA 252
Query: 244 EQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+L +P + + L G+I+ST+DE
Sbjct: 253 AKLNLPMPDVARAGEELLTAGVIFSTVDE 281
>gi|392574533|gb|EIW67669.1| hypothetical protein TREMEDRAFT_18062, partial [Tremella
mesenterica DSM 1558]
Length = 250
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 20/249 (8%)
Query: 26 SADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEER 85
S D P +S S + PVTVK I +AS D S+F I+G ++ V LVG V +
Sbjct: 20 SQDSPGGKKKSNTST-IRPVTVKQILDASQPHPD-SDFAIDGYDVGQVLLVGSVRAVSKS 77
Query: 86 ASDVNFTLDDGTGRVVCKRWASEVFDTRE-MEAIQDGMYVRLIGNLKSFQGKKQIVAFSV 144
A++V + DGTG + + W D E + I+ YV ++G++K F GK+ I A +
Sbjct: 78 ATNVQVEIGDGTGYIDARLWLDSAEDESEKAKGIEQDKYVGIMGSIKLFGGKRHISASHI 137
Query: 145 RPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTN 204
R + + +EV H ++ +Y L G + D + T S Y P
Sbjct: 138 RLIEDLNEVYNHLLKALYVSLTLRNPGTTGQAHAHAPNNDYNAPVGMTTTESPYANLPP- 196
Query: 205 LSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQ-KKIMDSIASLENE 263
+ I++ + S E E G+HV+ +S + + + +M++I +L E
Sbjct: 197 ------------LQRKIMEIV---SKEESEDGMHVSAVSRSMTGTKGEDVMEAIENLMGE 241
Query: 264 GLIYSTIDE 272
G++YST+D+
Sbjct: 242 GMLYSTVDD 250
>gi|145353240|ref|XP_001420928.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581164|gb|ABO99221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 249
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 125/242 (51%), Gaps = 32/242 (13%)
Query: 44 PVTVKMIS---EASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRV 100
P+TVKM+ +A + D+ ++NG+ + N+T+VG + E ++S V + +DD TG
Sbjct: 27 PLTVKMLKRAIDARQTPDE--TLVVNGVPVHNLTVVGKIVGVESKSSYVLYKVDDSTGVC 84
Query: 101 VCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFS---VRPVTNFDEVTCHY 157
K W+ + D + E I+ G YVR+ G++K+ + I A + VR +T+ +EVT H
Sbjct: 85 DVKVWSDQDGD-QTAEPIEVGAYVRVYGSVKTLANEHMIAAHTQQAVRKITDHNEVTFHM 143
Query: 158 IECIYFHLQNSKSQVQG--FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLK 215
+E +Y K++V G P++ + + N +A L G +
Sbjct: 144 LEVVYASGHAEKTKVSGGAAPANAYTVPQQAPNVAANGDL-----------------GSE 186
Query: 216 DCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQKKIMDSIASLENEGLIYSTIDEF 273
+ D I+ L+Q +E E+G+ V+E++ + K + I ++ + N G +++TIDE
Sbjct: 187 EIDVSIMGVLKQ--FAEGEQGMTVDEIASKQNGKFTRDAIKAALEEMSNGGEVFTTIDED 244
Query: 274 HY 275
HY
Sbjct: 245 HY 246
>gi|170088392|ref|XP_001875419.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650619|gb|EDR14860.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 225
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 128/247 (51%), Gaps = 33/247 (13%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L P+T+ +++A+ + D + + ++G+EI VT+VG V + + + ++ + +DDGTGR+
Sbjct: 3 LRPLTIAQLNKATQAHTD-AEWQVDGMEIGQVTIVGHVSSIQAQTTNCVYVIDDGTGRIE 61
Query: 102 CKRWASEVFDTR----EMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
+ W+ VF R + +++ YVR+ G LK+F K+ I VRP + EV H
Sbjct: 62 ARHWS--VFFPRLPFQSINEVREKTYVRVTGGLKTFGSKRYINTTHVRPSKDPHEVYFHI 119
Query: 158 IECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG--VDGLK 215
+E I L + V P+ DS+ ++ Y TNLS+ G
Sbjct: 120 LEAITVTLTLERGPV------SPRGADST--------MANY----TNLSAPIGDEYSHRP 161
Query: 216 DCDQMILDYL-QQPSSSERERGVHVNELSEQL--KIPQKKIMDSIASLENEGLIYSTIDE 272
+Q I ++ +QP++ + G+HV ++ + +I D++ L ++GL+++TID+
Sbjct: 162 KLEQDICRFIAEQPAN---DAGIHVAAIARAVGGGGDAHRISDALDKLMDDGLVFTTIDD 218
Query: 273 FHYKFAR 279
H+ +R
Sbjct: 219 SHFNLSR 225
>gi|326435335|gb|EGD80905.1| hypothetical protein PTSG_01490 [Salpingoeca sp. ATCC 50818]
Length = 294
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 134/258 (51%), Gaps = 35/258 (13%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
+ PV VK + +A GDD S F++NG+ + V LV ++ N +++A+ +++ ++D TG +
Sbjct: 45 VTPVCVKQVKDA-QRGDDTS-FIVNGVAVDKVALVAVIRNVQQKATRISYNVEDHTGLID 102
Query: 102 CKRWASEVFDTREMEAI------QDGMYVRLIGNLKSFQG-KKQIVAFSVRPVTNFDEVT 154
++ S D E + ++G YVR++ ++++ + K++ AF + P+ + +E+T
Sbjct: 103 VMQYLSGGDDEEEPQVPEEVAQNREGRYVRIVASIRAGEDDSKRLNAFLITPIDDHNELT 162
Query: 155 CHYIECIYFHLQNSKS------------QVQGFPSSQPQMVDSSLNTSARTGLSGYQTAP 202
H++ +Y +L +S Q +G SQ M + T A G + + P
Sbjct: 163 YHFLNVVYANLVSSHGILGERKLGLQAGQPRGSQPSQAGMAGQGMGT-ATNGATAFNNTP 221
Query: 203 TNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQ----KKIMDSIA 258
+ GL Q +L+ +Q S+ E GV ++ + ++L+ PQ +I ++
Sbjct: 222 MDT-------GLPRNLQAVLNVIQTEGSAS-ETGVGMSTILDRLR-PQGFNEPQIRSAVE 272
Query: 259 SLENEGLIYSTIDEFHYK 276
L NEG +YST+D+ H+K
Sbjct: 273 ELLNEGQVYSTVDDDHFK 290
>gi|336364908|gb|EGN93261.1| hypothetical protein SERLA73DRAFT_189801 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377482|gb|EGO18644.1| hypothetical protein SERLADRAFT_480906 [Serpula lacrymans var.
lacrymans S7.9]
Length = 276
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 128/247 (51%), Gaps = 11/247 (4%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R+ S L P+T+ + +AS + D +++M++ EI VT+VG V + + +A++ + LD
Sbjct: 37 RNEVSHSLRPMTIHQLQDASQAHSD-ADWMLDETEIGQVTVVGQVVSIQSQATNSLYWLD 95
Query: 95 DGTGRVVCKRW--ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
DGTGR+ + W +S + + + + +G YVR++GNLK F K+ I A +R V + DE
Sbjct: 96 DGTGRIEARHWTDSSLTESSEKWDGVLEGTYVRVLGNLKMFGNKRYINATHIRNVQSPDE 155
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD 212
+ H +E + L + G Q + + N Q+ T + Q+
Sbjct: 156 IYFHLLEAMTVTLTWERGPPPG--PGQTHRLGAVANAPGAAAAVYKQSHSTASNEQYA-- 211
Query: 213 GLKDCDQMILDY-LQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTID 271
L Q I+ + L QP+S+E GVHV ++ + I D++ L +EG ++STI+
Sbjct: 212 HLPALQQSIISFILSQPTSTE---GVHVGAIARAVGGDAITISDALDKLMDEGHVFSTIN 268
Query: 272 EFHYKFA 278
+ H+ A
Sbjct: 269 DSHFNVA 275
>gi|50294217|ref|XP_449520.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528834|emb|CAG62496.1| unnamed protein product [Candida glabrata]
Length = 279
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 133/297 (44%), Gaps = 44/297 (14%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQP-PQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
M + ++ ++ +GGGF S P + D + ++ L PVT+K I ++ + D
Sbjct: 1 MATYQPYNEFSSVTGGGFENSDSRPNTMD----SGTGSNTNTLTPVTIKQILDSQQAIQD 56
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTR------ 113
F+ + E+ +V VG+V N + S++ TL+DGTG++ ++W+ + D
Sbjct: 57 GP-FITHNQELHHVCFVGVVRNITDHTSNIYLTLEDGTGQIEVRKWSDDSSDVAQGTDGD 115
Query: 114 ----EMEA--------IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
EM+ Q G YV++ G LK F GKK I ++ V +F++V H++E I
Sbjct: 116 DGFGEMKGGESQIAQQYQIGTYVKVFGALKEFGGKKNIQYAVIKNVDSFNDVIAHHLEAI 175
Query: 162 YFH-LQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQM 220
H + N K Q S + SL G G K+ Q
Sbjct: 176 KCHAIANGKMQGSSLASGDNEGAGQSLFVQDDEGA-----------------GNKNPLQR 218
Query: 221 ILDYLQQPSSSERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
IL++ +Q + V + +S+ L I + + + +L +G IY T+D+ H+
Sbjct: 219 ILEFCKQQCVGKDANTFAVPIPLISQSLDIDETTVRNCCTTLTEQGFIYPTLDDNHF 275
>gi|56755527|gb|AAW25942.1| SJCHGC02904 protein [Schistosoma japonicum]
Length = 262
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 148/286 (51%), Gaps = 38/286 (13%)
Query: 1 MFSSSQFDASNAFS--GGGFMPSQPPQSADYPSSTARSRDSQG-LVPVTVKMISEASHSG 57
M+SS+ + + S GGG+M S S+ + + QG +VP T I A+ G
Sbjct: 1 MWSSNDYGGTTTMSDFGGGYMASAGA------SAGQKKINYQGTIVPCTCAEILAANQDG 54
Query: 58 DDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTR---E 114
D + GLE + +T+VG+V + E ++ V + +DD TG + ++ +E D+ +
Sbjct: 55 DKFVSPC--GLEFSQITVVGIVRSVNESSTRVEYEIDDYTGPYLPVKFFTEDQDSTSSIQ 112
Query: 115 MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY---FHLQNSKSQ 171
++ YVR+ G++++FQG K ++AF V V++ +E+T H +E IY +++ +
Sbjct: 113 SRPFRELSYVRVHGHVRNFQGVKHVIAFRVIYVSDMNELTTHILEVIYARMLYIKMKHDE 172
Query: 172 VQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSS 231
G +++ +S+ N + T +G T L +Q L +
Sbjct: 173 SDGI-NNKGIFTESASNNAVGTVSNGL----TVLQNQI---------------LAIVRTF 212
Query: 232 ERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
ERG+ +++L+E+L+ IP+++I + + L EG +YST+D+ H++
Sbjct: 213 IGERGIPISQLTEKLRGIPERQIREDLDFLSAEGHVYSTVDDDHFR 258
>gi|453081572|gb|EMF09621.1| replication protein A, subunit RPA32 [Mycosphaerella populorum
SO2202]
Length = 271
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 28/284 (9%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKS 61
+S++ + A SGGGFMP Q+ + +ST R+ L PVT+K + +A H D
Sbjct: 5 YSTTSYGAQGGNSGGGFMPG--SQNNENSASTKRTYGKDTLRPVTIKQLLDAHHPHPDAD 62
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEA---- 117
+F+I+ E T VT VG V N + ++V + +DDGTG + K W T E E+
Sbjct: 63 HFIIDDSETTQVTFVGQVRNISAQTTNVTYKVDDGTGLIEVKVWVDADNFTGEEESGAVK 122
Query: 118 ----IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
++ G Y R+ G LK F K+ I A +R + + +E+ H++E HL+ +K
Sbjct: 123 KDKPVEQG-YARVWGRLKQFNNKRHIGAQYIRAIEDHNEIAYHFLEATVVHLEFAKG--- 178
Query: 174 GFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSER 233
P Q Q G +G Q + S G+ + +L L+ ++
Sbjct: 179 --PLDQLQA----------NGQTGQQATTDSGGSGSNFSGVSATARKVLQVLK--TNGNT 224
Query: 234 ERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKF 277
G+H +++ + ++ + L G++Y+T+D+ +
Sbjct: 225 NEGLHAQMVAQLTGLELVEVYKAGDELMGMGMVYTTVDDLTWAL 268
>gi|68482450|ref|XP_714857.1| hypothetical protein CaO19.2267 [Candida albicans SC5314]
gi|68482573|ref|XP_714795.1| hypothetical protein CaO19.9807 [Candida albicans SC5314]
gi|46436389|gb|EAK95752.1| hypothetical protein CaO19.9807 [Candida albicans SC5314]
gi|46436454|gb|EAK95816.1| hypothetical protein CaO19.2267 [Candida albicans SC5314]
gi|238883606|gb|EEQ47244.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 272
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 127/267 (47%), Gaps = 18/267 (6%)
Query: 13 FSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
S GGF S ++ R Q L PVT+K I++A+ D F +N +E+
Sbjct: 17 ISQGGFNTEHAGSSQRQTTTQVR----QSLTPVTIKQINDATQPVPD-GEFKVNNVELNM 71
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQ----DGMYVRLIG 128
++ VG+V N E + + T++DGTG + ++W E + E + + G YV + G
Sbjct: 72 ISFVGVVRNVENTNASIAVTIEDGTGSIDVRKWVDETISSAEEDFEKYNEMKGKYVYVGG 131
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLN 188
+LK F +K + S+ +T+ +++ H++ I HL K+Q + + N
Sbjct: 132 SLKQFNNRKTVQNASISLITDSNQIVYHHLSAIEHHL---KAQGITAADAASAGAGQATN 188
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKI 248
++A G + PT+LS G DQ+I + + +S GV V+ ++E+L I
Sbjct: 189 STASAGSGLFMDNPTSLSKDTG----SLTDQVIA--VLKEASRTMPDGVPVDYVAEKLSI 242
Query: 249 PQKKIMDSIASLENEGLIYSTIDEFHY 275
+++ + L +EG Y+ D+ Y
Sbjct: 243 TKEESQFQLLKLNDEGKAYAGYDDNSY 269
>gi|21627816|emb|CAD37148.1| possible replication factor-a protein [Aspergillus fumigatus]
Length = 274
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 24/261 (9%)
Query: 18 FMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVG 77
FMP + + P+ ++ L P+TVK +AS + + F I+G + +V +G
Sbjct: 24 FMPGE----MNSPAGGKGDNNNATLRPITVKQALDASQPYPEAA-FQIDGADAASVCFIG 78
Query: 78 LVYNKEERASDVNFTLDDGTGRVVCKRWA-SEVFDTREMEAIQDGM-YVRLIGNLKSFQG 135
V N ++++V + +DDGTG + K+W ++ DT E + + G ++ G +KSF
Sbjct: 79 QVRNISSQSTNVTYKIDDGTGEIEVKQWIDTQTADTMETDDGKAGTGKNQVFGKIKSFGN 138
Query: 136 KKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFP---SSQPQMVDSSLNTSAR 192
K+ + A VRP TN +EV CH +E HL ++ G P ++ + +A
Sbjct: 139 KRYVGAHCVRPTTNLNEVHCHLLEAAAIHLFFTR----GPPGGGAAGGASGAGANADAAM 194
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQK 251
G + Y T +NL + + + + + L+ +P S+E G+H ++ +L +P
Sbjct: 195 GGANDYGTGNSNLPA------MSPAARRVYNLLKTEPQSNE---GLHAQLIAAKLNLPMP 245
Query: 252 KIMDSIASLENEGLIYSTIDE 272
+ + L G+I+ST+DE
Sbjct: 246 DVARAGEELLTAGVIFSTVDE 266
>gi|242803560|ref|XP_002484199.1| possible replication factor-a protein [Talaromyces stipitatus ATCC
10500]
gi|218717544|gb|EED16965.1| possible replication factor-a protein [Talaromyces stipitatus ATCC
10500]
Length = 320
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 124/257 (48%), Gaps = 23/257 (8%)
Query: 34 ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTL 93
R ++ L PVT+K I +A+ + ++ F I+G +I +V +G V N +++++ + L
Sbjct: 67 GRQGENPTLRPVTIKQIIDATQT-HPEAPFQIDGADIGSVFCIGQVRNISTQSTNITYKL 125
Query: 94 DDGTGRVVCKRWASEVFDTREMEAIQDGM--------------YVRLIGNLKSFQGKKQI 139
DDGTG + K+W E + DG +V++ G LK F K+ +
Sbjct: 126 DDGTGEIEAKQWVDSTTARIEDDMDVDGKGVKHSTRKKVELNGFVKVFGKLKVFGNKRFL 185
Query: 140 VAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQ 199
A +VRPV++ +E+ H++E HL G P SQ + A +G
Sbjct: 186 GAHNVRPVSDVNEIHVHFLEATAVHLFFK----HGPPPSQGGNSGGAGAAGAYGADAGGM 241
Query: 200 TAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQKKIMDSIA 258
+ S + + + + + L+ +P S+E G+H+ +S +L +P ++ +
Sbjct: 242 KGGDDYSGGRPLPPMSASARRVYNLLRNEPQSNE---GLHMQNISAKLGLPSTEVQKAGD 298
Query: 259 SLENEGLIYSTIDEFHY 275
L + GLI+ST+DEF +
Sbjct: 299 ELLSAGLIFSTMDEFTW 315
>gi|213404342|ref|XP_002172943.1| replication factor-A protein [Schizosaccharomyces japonicus yFS275]
gi|212000990|gb|EEB06650.1| replication factor-A protein [Schizosaccharomyces japonicus yFS275]
Length = 274
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 27 ADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERA 86
A PS + L PVT+K I +A+ D ++F I+G+E+ +T+VG++ N +
Sbjct: 33 ASQPSVDRQQGAGNKLRPVTIKQILDATQVHAD-ADFKIDGVEVGQITIVGVLRNIHAQT 91
Query: 87 SDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRP 146
++ + ++DGTG + + W M + YVR+ G++K F K I + +R
Sbjct: 92 TNTTYQVEDGTGLIEVRHWEH----VEGMSDLSTDTYVRVYGSIKVFSEKIYIASQHIRT 147
Query: 147 VTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLS 206
+ + +EV H +E I HL ++ P+ + ++ TS G +G +L
Sbjct: 148 IKDPNEVHFHILETIAVHLYFTRKP----PAGSIEQAGAAGTTS--YGANGTGAVGDSLE 201
Query: 207 SQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLI 266
+ L ++ + ++ E GVH+ +L++ + P + L EG+I
Sbjct: 202 QKLAEYSLTPAQLAVMHAIH--NAPETNEGVHLRQLTQAVG-PGIDVNAVTEFLMQEGII 258
Query: 267 YSTIDEFHYK 276
Y+TIDE H+K
Sbjct: 259 YTTIDENHFK 268
>gi|340960305|gb|EGS21486.1| hypothetical protein CTHT_0033440 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 273
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 35/246 (14%)
Query: 42 LVPVTVKMISEAS--HSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
L PVT+K I + + G D ++G I+ VT VG V + + +++ +T+DDGTG
Sbjct: 40 LRPVTIKQILDCKEPYPGGD---LTLDGAPISQVTFVGQVRSVNAQTTNITYTVDDGTGM 96
Query: 100 VVCKRWASEVFDTREMEA---IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCH 156
+ K+W EM + I YVR+ G L ++ +K I A VR + +F+EV H
Sbjct: 97 IDVKKWIDADRINDEMNSNNHIVPDTYVRIFGRLTTYNNRKHIGAHCVRIIRDFNEVNYH 156
Query: 157 YIECIYFHLQNSKSQVQ----------GFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLS 206
+E Y HL +K Q G VD N+ + L+ A
Sbjct: 157 LLEATYVHLLLTKGGPQRPGQTGAATVGDIGGDSMFVDQGFNSDVQAKLAACSPAA---- 212
Query: 207 SQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLI 266
+ + ++L E GVHVN ++ ++ + +D+ L + GLI
Sbjct: 213 ------------RTVFNFLADNPMGGNE-GVHVNLIASNTRLSYRDALDAGNELLSHGLI 259
Query: 267 YSTIDE 272
Y T+D+
Sbjct: 260 YCTMDD 265
>gi|322701666|gb|EFY93415.1| putative replication factor-a protein [Metarhizium acridum CQMa
102]
Length = 278
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 29/282 (10%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEA--SHSGDD 59
+S + + A GGF + ++S + L VT+K I EA + +G D
Sbjct: 7 YSKTSYGAQGGDDSGGFFAGGSQPGS---QGGSKSYQDESLRSVTIKQILEADEAFTGAD 63
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEA-I 118
F I+ IT +T VG V N + ++V +DDGTG++ K+W
Sbjct: 64 ---FKIDNTTITQITFVGQVRNINPQPTNVTLKIDDGTGQIEVKKWIDADKADDANADQY 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
+ YVR+ G LKSF K+ + A +RPVT+F+EV H +E Y HL + +
Sbjct: 121 ELDSYVRVWGRLKSFSNKRHVGAHVIRPVTDFNEVNYHLLEATYVHL---------YLTR 171
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG-------VDGLKDCDQMILDYLQ-QPSS 230
P D + N + G N + G V G + + +++ P
Sbjct: 172 GPLGQDGAANGGGESMFVGGGGYGGNANGGGGSGQMLSKVSGCSAAAKKMFNFMNGAPGM 231
Query: 231 SERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+E GVH+N +S + + ++ + L GLIY+T+D+
Sbjct: 232 NE---GVHLNVISSSTGLSVRDVLAASDELLGHGLIYTTVDD 270
>gi|321258174|ref|XP_003193838.1| hypothetical protein CGB_D7370C [Cryptococcus gattii WM276]
gi|317460308|gb|ADV22051.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 242
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 23 PPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNK 82
P S D PS AR +Q + PVTVK I EA D ++F I+G+++ V LVG V N
Sbjct: 24 PYGSQDSPSRKARG-GNQTIRPVTVKQILEAQQVHPD-ADFTIDGVDVAQVLLVGSVRNM 81
Query: 83 EERASDVNFTLDDGTGRVVCKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVA 141
A++V++ + DGTG + + W S D+ + ++ YV L+G +K F GK+ + A
Sbjct: 82 STTATNVSYEIGDGTGYIDARVWLDSADDDSGKTTGVEQDHYVGLMGTIKVFGGKRHVSA 141
Query: 142 FSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDS--SLNTSARTGLS 196
+RP+T+ +EV H ++ +Y L G P + P+ + N A TG +
Sbjct: 142 THIRPITDANEVQHHLLKALYVSLILRG----GAPGNAPKAAGTRDDYNAGATTGAT 194
>gi|119191694|ref|XP_001246453.1| hypothetical protein CIMG_00224 [Coccidioides immitis RS]
gi|392864318|gb|EAS34853.2| hypothetical protein CIMG_00224 [Coccidioides immitis RS]
Length = 296
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 28/262 (10%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
S + ++ + L PVT+K +++A+ + D ++F I+ E+ V+ VG + N + ++ +
Sbjct: 36 SQSGKTYNKSSLRPVTIKQLNDATQAYSD-ADFKIDDTEVAQVSFVGQIRNISQLSTFMT 94
Query: 91 FTLDDGTGRVVCKRW-------ASEVFDTRE--------MEAIQDGMYVRLIGNLKSF-Q 134
+ LDDGTG + K+W + DT + E + +G Y ++ G L SF
Sbjct: 95 YKLDDGTGEIEVKKWLDNEERHEGDAMDTSDPTTGRTGKKELVVNG-YAKVWGKLGSFSN 153
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTG 194
++ + A +R +TN DE CH++E HL F P D++ + A+T
Sbjct: 154 NRRSVTAHVIRTLTNMDEYHCHFLEATAIHLY--------FKHGPPPSKDAADASKAQTS 205
Query: 195 LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERER-GVHVNELSEQLKIPQKKI 253
SG N S G L M +++ + R G+H+ L+ ++ P +
Sbjct: 206 GSGGAMRSDN-SMAAGERTLPPMSPMARKLFNTLNNTPQSREGLHLQHLASLMQAPVDNV 264
Query: 254 MDSIASLENEGLIYSTIDEFHY 275
+ L + LIY T+D++ +
Sbjct: 265 EKAARELNDLSLIYPTVDDYTW 286
>gi|401885261|gb|EJT49383.1| hypothetical protein A1Q1_01478 [Trichosporon asahii var. asahii
CBS 2479]
Length = 236
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 15/238 (6%)
Query: 37 RDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDG 96
R +Q L PVT+K I EA D +++ I+G++++++ +G V+N A++V + + DG
Sbjct: 11 RANQTLRPVTIKQIREAKQPHPD-ADWQIDGVDVSHIHYIGSVHNMATTATNVMYEIGDG 69
Query: 97 TGRVVCKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTC 155
TG + ++W SE + + I YV +IG LK F K + A +RPV N DEV
Sbjct: 70 TGYIETRQWLDSEADEQGKTAGIAQDKYVSMIGTLKKFNDKLHVSAQQIRPVDNSDEVYN 129
Query: 156 HYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLK 215
H ++ + L P + + Y + L
Sbjct: 130 HLLKALAVSLS----------YRNPTANGAPAGAGGVASANDYAAPGAAGGNASEYADLP 179
Query: 216 DCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEF 273
++ I++ + ++ + + GVHV+ +S Q +++M +I +L EG ++STID+
Sbjct: 180 PLERKIMEII---AAVDDDDGVHVSTVSRQCGGSGEEVMSAIENLMAEGRLFSTIDDL 234
>gi|119471858|ref|XP_001258231.1| possible replication factor-a protein [Neosartorya fischeri NRRL
181]
gi|119406383|gb|EAW16334.1| possible replication factor-a protein [Neosartorya fischeri NRRL
181]
Length = 338
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 32/269 (11%)
Query: 18 FMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVG 77
FMP + + P+ ++ L P+TVK +AS + + F I+G + +V +G
Sbjct: 80 FMPGE----MNSPAGGKGDNNNATLRPITVKQALDASQPYPEAA-FQIDGADAASVCFIG 134
Query: 78 LVYNKEERASDVNFTLDDGTGRVVCKRWA-SEVFDTREMEAIQDGM---------YVRLI 127
V N ++++V + +DDGTG + K+W ++ DT E + + G + ++
Sbjct: 135 QVRNISSQSTNVTYKIDDGTGEIEVKQWIDTQTADTMETDDGKAGTGKNQVELNGFAKVF 194
Query: 128 GNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFP---SSQPQMVD 184
G +KSF K+ + A VRP TN +EV CH +E HL ++ G P ++
Sbjct: 195 GKIKSFGNKRYVGAHCVRPTTNLNEVHCHLLEAAAIHLFFTR----GPPGGGAAGGASGA 250
Query: 185 SSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELS 243
+ +A G + Y +NL + + + + + L+ +P S+E G+H ++
Sbjct: 251 GAGADAAMGGANDYGVGNSNLPA------MSPAARRVYNLLKTEPQSNE---GLHAQLIA 301
Query: 244 EQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+L +P + + L G+I+ST+DE
Sbjct: 302 AKLNLPMPDVARAGEELLTAGVIFSTVDE 330
>gi|366992077|ref|XP_003675804.1| hypothetical protein NCAS_0C04500 [Naumovozyma castellii CBS 4309]
gi|342301669|emb|CCC69440.1| hypothetical protein NCAS_0C04500 [Naumovozyma castellii CBS 4309]
Length = 279
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 33/281 (11%)
Query: 12 AFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEIT 71
+ +GGGF S P S D + R+ L PVT+K I E++ D F+ + E+
Sbjct: 12 SVTGGGFDNSDRPNSGDADGAVNRTNT---LHPVTIKQILESTQEIQDGP-FVSHNQELH 67
Query: 72 NVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD-------------TREMEAI 118
+V VG+V N + S++ T++DGTG++ ++W+ + D ++ +
Sbjct: 68 HVCFVGVVRNITDHTSNIYLTIEDGTGQIEVRKWSDDATDMAAGNNEEDKQGSSQAAQQY 127
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFH-LQNSKSQVQGFPS 177
Q G YV++ G LK F GKK I ++ V +F+EV H++E I +H + N K S
Sbjct: 128 QMGTYVKIFGALKEFGGKKNIQYAVIKNVESFNEVLAHHLEVIKWHAIANGKIPNPSTGS 187
Query: 178 SQPQMVDSSLNTSARTG-LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERER- 235
+P L A G SG T S + IL++ ++ +
Sbjct: 188 GEP------LQQGAMGGNQSGQSLFVTENESNHSI------SDRILEFCKKQCEGKDANA 235
Query: 236 -GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
V + +++ L I + + +L +G IY T D+ ++
Sbjct: 236 FAVPIPLIAQSLNIDENTARNCCTTLTEQGFIYPTFDDNNF 276
>gi|349934880|dbj|GAA29387.1| replication factor A2 [Clonorchis sinensis]
Length = 167
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 90/155 (58%), Gaps = 20/155 (12%)
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQM 182
YVR+ G++++FQG KQI+AF V PVT+ +E+T H +E IY + N+K++
Sbjct: 28 YVRVHGHVRNFQGAKQIIAFRVLPVTDMNELTTHIMEVIYTRMLNTKAK----------- 76
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
L+ ++ LS ++ TN +GL IL ++ + ERG+ V +L
Sbjct: 77 ----LDEASGANLSKINSSATNFGGNVA-NGLTALQNQILAIVR---AFVGERGIPVTQL 128
Query: 243 SEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
SE+L+ IP+++I +++ L EG +YST+D+ H++
Sbjct: 129 SEKLRGIPERQIRENLDFLSGEGYVYSTVDDDHFR 163
>gi|335772536|gb|AEH58099.1| replication protein A 32 kDa subunit-like protein [Equus caballus]
Length = 212
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 110/214 (51%), Gaps = 16/214 (7%)
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMY 123
+ +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E + Y
Sbjct: 8 LGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSGENAVVPPETY 67
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
V++ G+L+SFQ KK+ VAF + P+ + +E T H +E + H+ +K+ Q P+ + +
Sbjct: 68 VKVAGHLRSFQNKKKSVAFKIMPLEDMNEFTTHILEVVNAHMMLNKANSQP-PAGRASIS 126
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELS 243
+ + + G G P N GL +L+ ++ + R G++ +L
Sbjct: 127 NPGMGEAGNFG--GNSLMPAN--------GLTVAQNQVLNLIK---ACPRPEGLNFQDLK 173
Query: 244 EQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
QL+ + I ++ L NEG IYST+D+ H+K
Sbjct: 174 NQLQHMAVASIKQAVDFLSNEGHIYSTVDDDHFK 207
>gi|406694815|gb|EKC98135.1| hypothetical protein A1Q2_07546 [Trichosporon asahii var. asahii
CBS 8904]
Length = 236
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 15/238 (6%)
Query: 37 RDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDG 96
R +Q L PVT+K I EA D +++ I+G++++++ +G V+N A++V + + DG
Sbjct: 11 RANQTLRPVTIKQIREAKQPHPD-ADWQIDGVDVSHIHYIGSVHNMATTATNVMYEIGDG 69
Query: 97 TGRVVCKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTC 155
TG + ++W SE + + I YV +IG LK F K + A +RPV N DEV
Sbjct: 70 TGYIETRQWLDSEADEQGKTAGIAQDKYVSVIGTLKKFNDKLHVSAQQIRPVDNSDEVYN 129
Query: 156 HYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLK 215
H ++ + L P + + Y + L
Sbjct: 130 HLLKALAVSLS----------YRNPTANGAPAGAGGVASANDYAAPGAAGGNASEYADLP 179
Query: 216 DCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEF 273
++ I++ + ++ + + GVHV+ +S Q +++M +I +L EG ++STID+
Sbjct: 180 PLERKIMEII---AAVDDDDGVHVSTVSRQCGGSGEEVMSAIENLMAEGRLFSTIDDL 234
>gi|112983110|ref|NP_001036939.1| replication protein A2 [Bombyx mori]
gi|55700850|dbj|BAD69790.1| Replication protein A middle subunit [Bombyx mori]
Length = 259
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 135/274 (49%), Gaps = 37/274 (13%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
SGGGF+ + Q + + R + P+ ++ +A HSG++ I G EI V
Sbjct: 7 SGGGFLNT-TNQFGNTATPKKTGRRAARTAPIVIR---QALHSGEE--GVKIWGTEIQIV 60
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRW----ASEVFDTREMEAIQDGMYVRLIGN 129
++V + + +++ + +T+ D TGR+ W A EV DT +Q Y+++ GN
Sbjct: 61 SIVARIRSIRMQSTKITYTIQDITGRMRAVLWLDQEAMEVEDTSS-PKVQVNDYIQIYGN 119
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQ-----NSKSQVQGFPSSQPQMVD 184
+K+ +G K ++AF + PVT+ + +T HY +CI+ +Q + +Q P ++
Sbjct: 120 VKTNKGTKVLMAFKIMPVTDVNIITFHYFQCIHNKIQMEAGSKKEKNIQDVP------IN 173
Query: 185 SSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSE 244
+ L ++ G+ T SS V+GL M+ + ++ S E+G+ ++
Sbjct: 174 NMLPANSMVGI-------TETSS---VNGLNSRQMMVFNLIR---GSTVEQGISKQDMYA 220
Query: 245 QLKIPQKKI--MDSIASLENEGLIYSTIDEFHYK 276
LK K+ + + + EG IYSTIDE H++
Sbjct: 221 SLKDRMTKVEFENILEWMCGEGHIYSTIDEEHFR 254
>gi|258573241|ref|XP_002540802.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901068|gb|EEP75469.1| predicted protein [Uncinocarpus reesii 1704]
Length = 252
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
S + + + L PVT+K +++A+ + D + F I+ EIT V+ VG V N + ++
Sbjct: 7 SQSGKKATKESLRPVTIKQLNDATQAYTD-AEFKIDDTEITQVSFVGQVRNISQLSTFTT 65
Query: 91 FTLDDGTGRVVCKRW-------ASEVFDTR-------EMEAIQDGMYVRLIGNLKSF-QG 135
+ LDDGTG + KRW ++ DT + I YV++ G L S+
Sbjct: 66 YKLDDGTGEIEVKRWLDRSDGMQADPMDTDSAATKRPDKNQIVTNGYVKVWGKLSSYSNN 125
Query: 136 KKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGL 195
++ + A +RP+T+ DE CH++E HL ++ G P ++ + S T
Sbjct: 126 RRSVTAVVIRPLTSMDEYHCHFLEATSIHLYFTR----GPPPNKDKPEAGKGQGSGMTVT 181
Query: 196 SGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMD 255
A + + ++ Y ++ + G+HV +L+ L +
Sbjct: 182 GKPLPALSPMGTKL--------------YEALSNTLQSREGLHVQQLASMLNASTSDVRK 227
Query: 256 SIASLENEGLIYSTIDEFHY 275
+ L +GLI++T+DEF +
Sbjct: 228 TCDELAEQGLIFTTVDEFTW 247
>gi|367045570|ref|XP_003653165.1| hypothetical protein THITE_2047529, partial [Thielavia terrestris
NRRL 8126]
gi|347000427|gb|AEO66829.1| hypothetical protein THITE_2047529, partial [Thielavia terrestris
NRRL 8126]
Length = 239
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 24/245 (9%)
Query: 42 LVPVTVKMISEA--SHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
L PVT+K + E ++ G D ++G+ T VTLVG V + +A +V + +DDGTG
Sbjct: 4 LRPVTIKQLIECKEAYPGAD---LAVDGVPTTQVTLVGQVRSVNPQAVNVTYRIDDGTGV 60
Query: 100 VVCKRW--ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
+ K+W A + +T YVR+ G L SF G+K + A +R + +F+EV H
Sbjct: 61 IDVKKWIDADKADNTPRFAP---DTYVRVFGRLSSFNGRKHVGAHYIRAIDDFNEVNYHL 117
Query: 158 IECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG---L 214
+E Y HL +K + Q Q + G S + DG L
Sbjct: 118 LEATYVHLCLTKGGLADLQQQQQQQQQQQVGDDG--GDSMFVDGGYGAGGGISSDGPPRL 175
Query: 215 KDCD---QMILDYL-QQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTI 270
C + + +YL P S+ H+N++S +P + ++ + A L + GLIY+T
Sbjct: 176 SVCSRNARTMYNYLVNTPGDSQ-----HINQISAGTGLPVRDVLAASAELLDNGLIYTTD 230
Query: 271 DEFHY 275
D+ +
Sbjct: 231 DDVTW 235
>gi|374107133|gb|AEY96041.1| FADL176Wp [Ashbya gossypii FDAG1]
Length = 275
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 40/287 (13%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
F+ + +GGGF SQ SA P ST + + L PVT+K I EA D ++++
Sbjct: 8 FNEFSTVTGGGF-DSQA--SAGRPGSTG-GQSTATLTPVTIKQILEAKQQVQDGP-YVVH 62
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREME---------- 116
+E+ N+ VG+V N + ++VN T++DGTG++ ++W++ D ++ME
Sbjct: 63 SMELHNICFVGVVRNVVDNTANVNVTVEDGTGQIEFRQWSN---DQKDMERASQGETAEY 119
Query: 117 ------AIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKS 170
Q G YV++ L+ F GK I V+PV NF+EV H++ I
Sbjct: 120 NSELSQQFQIGNYVKVFATLREFGGKMNIQYALVKPVENFNEVLAHHLAAI--------- 170
Query: 171 QVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSS 230
+ + + ++ + +A G G Q+ + K Q ILD+ +
Sbjct: 171 --KCYALANGRLAPPAAPFNAAAGAQGGQSL---FVQDNDYNSAKPATQRILDFCRDQCK 225
Query: 231 SERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ VH +++ L + + + +L +G IY T DE Y
Sbjct: 226 DKDANTFSVHTKFIAQSLSMLEDDVRMHCQTLTEQGFIYPTFDENSY 272
>gi|58267036|ref|XP_570674.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226907|gb|AAW43367.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 251
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
Query: 23 PPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNK 82
P S D PS AR + Q + PVTVK I +A D ++F I+G+++ V L+G V N
Sbjct: 24 PYGSQDSPSRKARGGN-QTIRPVTVKQILDAQQVHPD-ADFTIDGVDVAQVLLIGSVRNM 81
Query: 83 EERASDVNFTLDDGTGRVVCKRWASEVFD-TREMEAIQDGMYVRLIGNLKSFQGKKQIVA 141
A+++++ + DGTG + + W D + + I+ YV L+G +K F GK+ + A
Sbjct: 82 STTATNISYEIGDGTGYIDARVWLDSADDESGKTTGIEQDHYVGLMGTIKVFGGKRHVSA 141
Query: 142 FSVRPVTNFDEVTCHYIECIYFHL 165
+RP+T+ +EV H ++ +Y L
Sbjct: 142 THIRPITDGNEVQHHLLKALYVSL 165
>gi|327353325|gb|EGE82182.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 280
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 29/244 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K EA+ + D ++F I+G E++ + VG V + V + LDDGTG +
Sbjct: 45 LRPVTIKQTLEATQAHGD-ADFKIDGTEVSQLAFVGQVRAVSHLTTFVTYKLDDGTGEIE 103
Query: 102 CKRW--------ASEVFDT----REMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
K W + DT R E+ IQ Y ++ G L +F ++ VA +RP+T
Sbjct: 104 VKLWLEKNAVNPTGDDMDTGDASRSSESEIQVNGYAKVWGKLNNFNNRRNFVAHVIRPIT 163
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
+ DE CH++E HL ++ G P + +TS L G P + ++
Sbjct: 164 SMDEYHCHFLEATAIHLYYTRGPTGGQPGGNAP--PGAASTSGGDPLGGRTLPPMSPLAR 221
Query: 209 FGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYS 268
+ L + Q G+HV L+ + +P ++ L + GLIY
Sbjct: 222 KVYETLSNTPQ-------------GNEGLHVQNLASMMGLPVGEVFKGSEELLSHGLIYP 268
Query: 269 TIDE 272
T+D+
Sbjct: 269 TVDD 272
>gi|261193385|ref|XP_002623098.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239588703|gb|EEQ71346.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239613975|gb|EEQ90962.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
dermatitidis ER-3]
Length = 286
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 29/244 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K EA+ + D ++F I+G E++ + VG V + V + LDDGTG +
Sbjct: 51 LRPVTIKQTLEATQAHGD-ADFKIDGTEVSQLAFVGQVRAVSHLTTFVTYKLDDGTGEIE 109
Query: 102 CKRW--------ASEVFDT----REMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
K W + DT R E+ IQ Y ++ G L +F ++ VA +RP+T
Sbjct: 110 VKLWLEKNAVNPTGDDMDTGDASRSSESEIQVNGYAKVWGKLNNFNNRRNFVAHVIRPIT 169
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
+ DE CH++E HL ++ G P + +TS L G P + ++
Sbjct: 170 SMDEYHCHFLEATAIHLYYTRGPTGGQPGGNAP--PGAASTSGGDPLGGRTLPPMSPLAR 227
Query: 209 FGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYS 268
+ L + Q G+HV L+ + +P ++ L + GLIY
Sbjct: 228 KVYETLSNTPQ-------------GNEGLHVQNLASMMGLPVGEVFKGSEELLSHGLIYP 274
Query: 269 TIDE 272
T+D+
Sbjct: 275 TVDD 278
>gi|428698227|pdb|4GOP|B Chain B, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
gi|428698230|pdb|4GOP|Y Chain Y, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
gi|451928924|pdb|4GNX|B Chain B, Structure Of
gi|451928927|pdb|4GNX|Y Chain Y, Structure Of
Length = 136
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT++ I A D + F+++G E+ +T V +V N A++V ++++DGTG++
Sbjct: 9 LRPVTIRQILNAEQPHPD-AEFILDGAELGQLTFVAVVRNISRNATNVAYSVEDGTGQIE 67
Query: 102 CKRW-ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
++W S D+ + I++ +YVR++G LKSFQ ++ I + +RPV +++EV H +E
Sbjct: 68 VRQWLDSSSDDSSKASEIRNNVYVRVLGTLKSFQNRRSISSGHMRPVIDYNEVMFHRLEA 127
Query: 161 IYFHLQNSK 169
++ HLQ ++
Sbjct: 128 VHAHLQVTR 136
>gi|392567166|gb|EIW60341.1| replication protein A subunit RPA32 [Trametes versicolor FP-101664
SS1]
Length = 292
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 28/259 (10%)
Query: 33 TARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFT 92
TAR S L PVT+K + EAS + D +++ I +E+ VT+V V + + + ++ +
Sbjct: 42 TARRAASHALRPVTLKQLVEASQAHSD-ADWTIGDVEVGQVTVVAQVLSIQPQTTNCIYL 100
Query: 93 LDDGTGRVVCKRWASEVFDTRE--MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNF 150
L+DGT + ++W D + I++ Y+R++G+LK F K+ I A ++P
Sbjct: 101 LNDGTANMEARQWVDANTDDENGSKDEIKESTYIRVLGSLKVFGNKRYITATHIKPYKGE 160
Query: 151 DEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSS--- 207
DE+ H +E L + P +P +L A T +G Q+A T SS
Sbjct: 161 DELFFHILEAATVTLTFERG-----PPPRPSEGAHALMNRANTAAAG-QSAYTAQSSTTA 214
Query: 208 ----QFGVDGLKDCDQMILDYL-QQPSSSERERGVHVNELSEQLKI------PQKKIMDS 256
QF + I+ ++ QP S E GVHV ++ + I +
Sbjct: 215 ASTGQFA--HFAPLQREIMQFIVSQPKSDE---GVHVAAIARHVATLGPDLGNAHSISQA 269
Query: 257 IASLENEGLIYSTIDEFHY 275
+ L ++G +YSTID+ H+
Sbjct: 270 LDHLMDQGHVYSTIDDSHF 288
>gi|451999036|gb|EMD91499.1| hypothetical protein COCHEDRAFT_1136108 [Cochliobolus
heterostrophus C5]
Length = 272
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCK 103
PVT+K I +A F I+G I+ +T+VG + N + ++ + LDDGTG + K
Sbjct: 47 PVTIKQILDAQGEAGSNDTFKIDGTVISQLTIVGQIRNISNQTTNTTYRLDDGTGSIEVK 106
Query: 104 RWAS-EVFDTREMEAIQ--DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
+W + E D + + +G Y R G L+SF +K + A +RP+ + +E++ H +E
Sbjct: 107 QWVNPETVDHSNLAKAKLVEGAYCRAWGKLRSFNDRKSVGATIIRPIEDMNEISYHLLEA 166
Query: 161 IYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQM 220
HL ++ P Q ++ + GY A + G +
Sbjct: 167 TAIHLYFTRG-----PPDQAGGATANGAGKQQAIEGGYGGAE--------LAGYSQAAKR 213
Query: 221 ILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ +L + S GV+ E++ +L I + + L GLIY+T+D+
Sbjct: 214 VFKFLGEVEQS--NEGVNQYEIASKLGIDAADVAKAGEDLLAGGLIYTTLDD 263
>gi|145240461|ref|XP_001392877.1| possible replication factor-a protein [Aspergillus niger CBS
513.88]
gi|134077395|emb|CAK40009.1| unnamed protein product [Aspergillus niger]
Length = 288
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 38/276 (13%)
Query: 18 FMPSQPPQS-----ADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
FMP + S +DY +ST R P+T+K +A + + + I+ EI++
Sbjct: 22 FMPGEMNNSPSGGKSDYTNSTLR--------PITIKQALDAVQPYPE-APYQIDSAEISS 72
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW----------ASEVFDTREMEAIQDGM 122
+ +G V N ++++V + +DDGTG + K+W ++ +T+ +DG
Sbjct: 73 ICFIGQVRNISSQSTNVTYKIDDGTGEIEAKQWIDSMTADSMDTDDINNTKAATGRRDGK 132
Query: 123 -----YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPS 177
Y ++ G LKSF K+ + A VRPV + DEV CH +E HL ++ G S
Sbjct: 133 VELNGYAKVFGKLKSFGNKRFVGAHCVRPVKSLDEVHCHLLEASAVHLFFTRGPPGGGAS 192
Query: 178 SQPQMVDSSLNTSARTGLSGYQ-TAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERG 236
+ D A G +G A NL + V K Q++ +P S+E G
Sbjct: 193 GAGGVGDVGAKGDAAMGGTGDDYGAGKNLPAMSPV--AKRVYQLL---RTEPQSNE---G 244
Query: 237 VHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+H ++ +L +P + + L G+I+ST+DE
Sbjct: 245 LHAQLIAAKLSLPMPDVARAGDELLTAGVIFSTVDE 280
>gi|345570658|gb|EGX53479.1| hypothetical protein AOL_s00006g345 [Arthrobotrys oligospora ATCC
24927]
Length = 284
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 14/158 (8%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
++ RS L PVT+K I +A DD + F+I+ +EI +VT V + + ++ ++
Sbjct: 24 ATPGRSAAKNTLRPVTIKQILDAQTPHDDNT-FVIDDVEIGHVTFVAQILSISDQETNST 82
Query: 91 FTLDDGTGRVVCKRWASE----VFDTREMEA-----IQDGMYVRLIGNLKSFQGKKQIVA 141
+ ++DGTG + K + E V D E E+ +Q Y R++G++K F K+ I
Sbjct: 83 YKMEDGTGSIEVKFFRGERNSMVDDDGENESSREAGLQINTYARVLGSIKQFNNKRNITT 142
Query: 142 FSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
SV+PVT+F+EV CH++E HL ++ G P SQ
Sbjct: 143 HSVKPVTDFNEVQCHFLEVTAVHLHFTR----GPPESQ 176
>gi|396463070|ref|XP_003836146.1| similar to replication protein A 32 kDa subunit [Leptosphaeria
maculans JN3]
gi|312212698|emb|CBX92781.1| similar to replication protein A 32 kDa subunit [Leptosphaeria
maculans JN3]
Length = 274
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 19/242 (7%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R L PVT+K I EA+ K F I+G VT VG + N + ++ + LD
Sbjct: 39 REHTQDSLRPVTIKQILEATTDSSSKDEFKIDG---AIVTFVGQIRNISTQTTNTTYRLD 95
Query: 95 DGTGRVVCKRWA-SEVFD-TREMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFD 151
DGTG + K+W S+ D T +A + +G Y R G LKSF +K + A +R + + +
Sbjct: 96 DGTGSIEVKQWVDSDAVDHTNPAKAKLVEGAYCRAWGKLKSFNDRKSVGAQIIRAIEDMN 155
Query: 152 EVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGV 211
E++ H +E HL F P ++ + T+ G Q A + + +
Sbjct: 156 EISYHLLEATAVHLY--------FTRGPPGAANTGVATN-NAGAGQQQQATSGNLGGYNL 206
Query: 212 DGLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTI 270
+ + +L++ P S+E G++ +E++ +L I ++ + L GLIY+T+
Sbjct: 207 STYTPVARRVFQFLREAPQSNE---GLNQHEIAAKLGIDTAEVARAGDDLLAGGLIYTTV 263
Query: 271 DE 272
D+
Sbjct: 264 DD 265
>gi|45187697|ref|NP_983920.1| ADL176Wp [Ashbya gossypii ATCC 10895]
gi|44982458|gb|AAS51744.1| ADL176Wp [Ashbya gossypii ATCC 10895]
Length = 275
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 40/287 (13%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
F+ + +GGGF SQ SA P ST + + L PVT+K I EA D ++++
Sbjct: 8 FNEFSTVTGGGF-DSQA--SAGRPGSTG-GQSTATLTPVTIKQILEAKQQVQDGP-YVVH 62
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREME---------- 116
+E+ N+ VG+V N + ++VN T++DGTG++ ++W++ D ++ME
Sbjct: 63 SMELHNICFVGVVRNVVDNTANVNVTVEDGTGQIEFRQWSN---DQKDMERASQGETAEY 119
Query: 117 ------AIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKS 170
Q G YV++ L+ F GK I V+PV NF+EV H++ I
Sbjct: 120 NSELSQQFQIGNYVKVFATLREFGGKMNIQYALVKPVENFNEVLAHHLAAI--------- 170
Query: 171 QVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSS 230
+ + + ++ + +A G G Q+ K Q ILD+ +
Sbjct: 171 --KCYALANGRLAPPAAPFNAAAGAQGGQSL---FVQDNDYSSAKPATQRILDFCRDQCK 225
Query: 231 SERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ VH +++ L + + + +L +G IY T DE Y
Sbjct: 226 DKDANTFSVHTKFIAQSLSMLEDDVRMHCQTLTEQGFIYPTFDENSY 272
>gi|392591816|gb|EIW81143.1| replication protein A subunit RPA32 [Coniophora puteana RWD-64-598
SS2]
Length = 303
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 28/254 (11%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
RS S L P+T+ + A+ + D + +M+ +EI +VT V V + + +A++ + LD
Sbjct: 43 RSDVSHSLRPLTISQLLNATQAHSD-AEWMLEDMEIGHVTCVAHVVSVQNQATNHVYELD 101
Query: 95 DGTGRVVCKRWASEVFD--------TREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRP 146
DGTGR+ + + +++ + G YVR++GNLK F + I +RP
Sbjct: 102 DGTGRIEARHQTDSSLEEDADKEAGIKQVNIVYKGTYVRVLGNLKMFGSTRYINVNHIRP 161
Query: 147 VTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLS 206
+ DE+ H E + + + V+ +Q S T + G +
Sbjct: 162 AKSADEIDLHPREAVTPTMMRERGPVKSHSVAQ-----SDDATQSHGG--------ALID 208
Query: 207 SQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGL 265
SQ+ L + +Q IL +++ QP++ E GV + L+ + ++ L N+GL
Sbjct: 209 SQWA--HLSELNQNILQFIKDQPAT---EEGVDSAAILGALETTALALDQALEQLMNDGL 263
Query: 266 IYSTIDEFHYKFAR 279
IYST+DE H++ +
Sbjct: 264 IYSTVDESHFQLTQ 277
>gi|320586250|gb|EFW98929.1| putative replication factor-a protein [Grosmannia clavigera kw1407]
Length = 278
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 2/242 (0%)
Query: 31 SSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN 90
S R+ + L PVT+K + + + S F I+G T +TLVG V + ++V
Sbjct: 33 SQGGRNYNEDSLRPVTIKQLLDTEEAYPGASEFTIDGAAATQLTLVGQVRAVNPQPTNVT 92
Query: 91 FTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNF 150
+ +DDGTG + K+W + +VR+ G LK F K+ + A +R + ++
Sbjct: 93 YRIDDGTGCIEVKKWVDADKNEEAEARFALDQHVRVFGRLKLFNQKRYVGAHFLRAIDDY 152
Query: 151 DEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG 210
+EV+ H +EC Y HL ++ + + ++ + + Q
Sbjct: 153 NEVSYHMLECTYVHLCLTRGAPEAGAGAGAGAGAANSAGTHNDSMFVDQDGGGYGGGSAA 212
Query: 211 VDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTI 270
L Q I +L+ ++ G++VN + +LK+ M +I L + +I++T+
Sbjct: 213 TRHLSPNGQKIYHFLRNMATG--NEGINVNVIINELKLGYGPTMTAIQELTDNAVIFATV 270
Query: 271 DE 272
D+
Sbjct: 271 DD 272
>gi|444314851|ref|XP_004178083.1| hypothetical protein TBLA_0A07750 [Tetrapisispora blattae CBS 6284]
gi|387511122|emb|CCH58564.1| hypothetical protein TBLA_0A07750 [Tetrapisispora blattae CBS 6284]
Length = 272
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 129/286 (45%), Gaps = 54/286 (18%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
+GGGF S S+D + R+ L PVT+K I+E+ D F+I+ E+ ++
Sbjct: 14 TGGGFDSSDKIHSSDGSEAINRNN---SLTPVTIKQITESKQLVQDGP-FVIHNQELNHI 69
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD------------- 120
+ VG+V N + S++ T++DGTG++ ++W+ D+ ++ QD
Sbjct: 70 SFVGVVRNITDHTSNIFLTIEDGTGQIDVRKWSD---DSNDISTSQDDSEKAGNSQIAQQ 126
Query: 121 ---GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFH------LQNSKSQ 171
G YV++ G LK F GKK + +R V +F+EV H++E I H +QN
Sbjct: 127 YKVGSYVKVHGALKEFGGKKNVQYAVIRTVDSFNEVITHHLEVIKCHAIAMGKMQN---- 182
Query: 172 VQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSS 231
PS + ++ + G S + + +N D Q +L + ++
Sbjct: 183 ----PSGE------AVKDTQEEGKSLFVSENSNSG---------DTAQEVLAFCRKKCEG 223
Query: 232 E--RERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ + V +++ L I + + L +G IY T D+ HY
Sbjct: 224 QDANQFAVPTALIAQSLNISEDQARRCCTQLIEQGYIYPTFDDDHY 269
>gi|302692984|ref|XP_003036171.1| hypothetical protein SCHCODRAFT_106001 [Schizophyllum commune H4-8]
gi|300109867|gb|EFJ01269.1| hypothetical protein SCHCODRAFT_106001, partial [Schizophyllum
commune H4-8]
Length = 306
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 123/242 (50%), Gaps = 10/242 (4%)
Query: 32 STARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNF 91
S +S S + T+ ++ A+ D + F + G E+ +VT+VG V + ++A++
Sbjct: 35 SAQKSEASHSIRACTIGQLTRATQVHTD-APFTVGGFELGHVTIVGHVKSLRDQATNTVI 93
Query: 92 TLDDGTGRVVCKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNF 150
++DG+G + + WA + + + +G R+ G+LK F KK I A VRPV +
Sbjct: 94 IINDGSGELEARLWADAGQSPSDSYGGVHEGGIARVTGSLKVFGAKKYINAACVRPVEH- 152
Query: 151 DEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG 210
+E H+ E +Y ++ + G +++ + ++++ G S Y AP+ S G
Sbjct: 153 NERVFHHFEVMYSTIRLERGAPPGTKAAEHAPAGAFASSTSGGGASAY-LAPS--SKPVG 209
Query: 211 VDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQ-KKIMDSIASLENEGLIYST 269
G K + I DY++Q + E GV V ++++ L K+I +++ L +EG +Y+T
Sbjct: 210 SGGKKSLKEEITDYMRQ---HKTEDGVSVKDIAQALSSSNAKQISEALDQLLDEGNVYTT 266
Query: 270 ID 271
D
Sbjct: 267 TD 268
>gi|260821938|ref|XP_002606360.1| hypothetical protein BRAFLDRAFT_118513 [Branchiostoma floridae]
gi|229291701|gb|EEN62370.1| hypothetical protein BRAFLDRAFT_118513 [Branchiostoma floridae]
Length = 1267
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 11/136 (8%)
Query: 36 SRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDD 95
SR +Q L+P T+ + +A D +F + +I VT+VG+V N + +++ + +DD
Sbjct: 45 SRRAQNLLPCTISHLLQAQQMED---SFRLGDTDINQVTVVGVVRNAQRAPTNILYKIDD 101
Query: 96 GTGRVV-CKRWASEVFDTREMEAIQDGM-----YVRLIGNLKSFQGKKQIVAFSVRPVTN 149
TG + ++W D E QD + Y+R G+L++FQGKK +VAF + PVT+
Sbjct: 102 MTGPPMDVRQWLDN--DDTIAEEEQDQLFPVNSYIRATGHLRAFQGKKSLVAFKIAPVTD 159
Query: 150 FDEVTCHYIECIYFHL 165
F+E+T H +E + H+
Sbjct: 160 FNELTMHILEVVQAHM 175
>gi|406601731|emb|CCH46664.1| Replication protein A 32 kDa subunit [Wickerhamomyces ciferrii]
Length = 250
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 20/260 (7%)
Query: 13 FSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
++GG + S S S R++ L PVT+K I+++ D F+++ LE+
Sbjct: 5 YNGGDYNTSGGFDSTGGGSQGTRTQTKNSLTPVTIKQINDSKPIIQD-GEFVVHNLELNL 63
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
V+ VG++ + S++ ++DGTG + ++W + I+DG YV + G++K
Sbjct: 64 VSFVGVIRKVTDNTSNLQVQIEDGTGSIELRKWVDDNAQEDANTFIRDGKYVYVTGSVKE 123
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR 192
F GKK I + R +T+++EV H++ I HL+ +Q + S +
Sbjct: 124 FGGKKNIQHTTFREITDYNEVLYHHLSAIDSHLK-----------AQGTIKSDSGAQGST 172
Query: 193 TGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKK 252
GL + + P+ +S+ G GL D+ I +Y+ + + S E GV V +++ L +
Sbjct: 173 NGL--FVSGPS--ASETG--GLSTADR-IHEYISENTPSMPE-GVPVQLIAQNLNLLVDD 224
Query: 253 IMDSIASLENEGLIYSTIDE 272
++ L + IY+ DE
Sbjct: 225 VILHCGKLTEDAKIYAGYDE 244
>gi|240275044|gb|EER38559.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
capsulatus H143]
Length = 265
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 28/244 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K +A+ + D ++F I+G E++ VT VG V + V + LDDGTG +
Sbjct: 29 LRPVTIKQTLDATQAHGD-ADFKIDGTEVSQVTFVGQVRAVSHLTTFVTYKLDDGTGEIE 87
Query: 102 CKRW--------ASEVFDT----REMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
K W + DT R E+ I Y ++ G L +F ++ VA +RP+T
Sbjct: 88 VKLWLEKNAVNPTGDDMDTGDAPRSSESEIPINGYAKVWGKLNNFNNRRNFVAHVIRPIT 147
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
N DE CH++E HL ++ V G + + ++ + S +G P + ++
Sbjct: 148 NIDEYNCHFLEATAIHLYYTRGPVGGHLGDEKPLPGAT-HASGGGPFAGKTLPPMSPLAR 206
Query: 209 FGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYS 268
+ L + P S+E G+HV L+ + +P ++ + L + LI+S
Sbjct: 207 KMYETLSNT----------PQSNE---GLHVQHLASLMGLPVGEVYKAKEELLSLALIFS 253
Query: 269 TIDE 272
T+D+
Sbjct: 254 TVDD 257
>gi|325094396|gb|EGC47706.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
capsulatus H88]
Length = 276
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 28/244 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K +A+ + D ++F I+G E++ VT VG V + V + LDDGTG +
Sbjct: 40 LRPVTIKQTLDATQAHGD-ADFKIDGTEVSQVTFVGQVRAVSHLTTFVTYKLDDGTGEIE 98
Query: 102 CKRW--------ASEVFDT----REMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
K W + DT R E+ I Y ++ G L +F ++ VA +RP+T
Sbjct: 99 VKLWLEKNAVNPTGDDMDTGDAPRSSESEIPINGYAKVWGKLNNFNNRRNFVAHVIRPIT 158
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
N DE CH++E HL ++ V G + + ++ + S +G P + ++
Sbjct: 159 NIDEYNCHFLEATAIHLYYTRGPVGGHLGDEKPLPGAT-HASGGGPFAGKTLPPMSPLAR 217
Query: 209 FGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYS 268
+ L + P S+E G+HV L+ + +P ++ + L + LI+S
Sbjct: 218 KMYETLSNT----------PQSNE---GLHVQHLASLMGLPVGEVYKAKEELLSLALIFS 264
Query: 269 TIDE 272
T+D+
Sbjct: 265 TVDD 268
>gi|225558605|gb|EEH06889.1| single-stranded DNA binding protein p30 subunit [Ajellomyces
capsulatus G186AR]
Length = 276
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 28/244 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K +A+ + D ++F I+G E++ VT VG V + V + LDDGTG +
Sbjct: 40 LRPVTIKQTLDATQAHGD-ADFKIDGTEVSQVTFVGQVRAVSHLTTFVTYKLDDGTGEIE 98
Query: 102 CKRW--------ASEVFDT----REMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
K W + DT R E+ I Y ++ G L +F ++ VA +RP+T
Sbjct: 99 VKLWLEKNAVNPTGDDMDTGDAPRSSESEIPINGYAKVWGKLNNFNNRRNFVAHVIRPIT 158
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
N DE CH++E HL ++ V G + + ++ + S +G P + ++
Sbjct: 159 NIDEYNCHFLEATAIHLYYTRGPVGGHLGDEKPLPGAT-HASGGGPFAGKTLPPMSPLAR 217
Query: 209 FGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYS 268
+ L + P S+E G+HV L+ + +P ++ + L + LI+S
Sbjct: 218 KMYETLSNT----------PQSNE---GLHVQHLASLMGLPVGEVYKAKEELLSLALIFS 264
Query: 269 TIDE 272
T+D+
Sbjct: 265 TVDD 268
>gi|190344638|gb|EDK36354.2| hypothetical protein PGUG_00452 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 29/266 (10%)
Query: 13 FSGGGFMPSQPPQ-SADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEIT 71
F GGF + AD S + + PVT+K + +A G D +F IN +E+
Sbjct: 9 FGDGGFSDTATGGFQADVDGSQKPQQTRSSITPVTIKQVIQAVALGPDL-DFRINNVELN 67
Query: 72 NVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM--YVRLIGN 129
V ++G++ + AS VN T++DG+G + ++W E E E + YV + G
Sbjct: 68 MVRVIGVLRKVDTNASAVNLTIEDGSGSMEVRKWTDETASAAEAEKYSSYLNQYVSVSGA 127
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNT 189
LK F KK I ++RP+++ ++V H++ I HL+ V+ P ++ +
Sbjct: 128 LKEFNNKKGIQQATIRPISDHNQVIYHHLSAISHHLKAQGLHVRRKPENENGLF------ 181
Query: 190 SARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIP 249
+S G D L++ +++ L PS E GV + +++++
Sbjct: 182 ---------------VSENGGGDSLQERVLQVINEL-TPSMQE---GVPLQLIAQKVNAT 222
Query: 250 QKKIMDSIASLENEGLIYSTIDEFHY 275
+ + L G IYST D+ Y
Sbjct: 223 DDSVENECQELVQSGRIYSTYDDRTY 248
>gi|169773153|ref|XP_001821045.1| possible replication factor-a protein [Aspergillus oryzae RIB40]
gi|238491102|ref|XP_002376788.1| possible replication factor-a protein [Aspergillus flavus NRRL3357]
gi|83768906|dbj|BAE59043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697201|gb|EED53542.1| possible replication factor-a protein [Aspergillus flavus NRRL3357]
gi|391865917|gb|EIT75196.1| single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit [Aspergillus oryzae 3.042]
Length = 276
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 124/242 (51%), Gaps = 22/242 (9%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L P+T+K +A+ + +++ I+G ++ ++ VG V N +++++ + +DDGTG +
Sbjct: 38 LRPITIKQALDATQPYPE-ADYQIDGADVGSICFVGQVRNISTQSTNITYRIDDGTGEIE 96
Query: 102 CKRWA----SEVFDTREMEA------IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFD 151
K+W ++ DT + +A + + Y ++ G LK+F K+ + + VRP+T+ +
Sbjct: 97 VKQWVDSATADTMDTDDSKAGAGKNQVVNNGYAKIFGKLKTFGNKRFVGSHCVRPLTDIN 156
Query: 152 EVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGV 211
E+ CH +E + HL ++ V G + + + G+ Y +A NL +
Sbjct: 157 ELHCHMLEAVAVHLFFTRGPVGGSGGAGAAAGGAGGADATMGGVDDY-SAGRNLPA---- 211
Query: 212 DGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTI 270
+ + + + L+ +P S+E G+H ++ +L +P + + L G+I+ST+
Sbjct: 212 --MSPVARRVYNLLKTEPQSNE---GLHAQLIAAKLSLPMPDVARAGDELLTAGVIFSTV 266
Query: 271 DE 272
DE
Sbjct: 267 DE 268
>gi|296806551|ref|XP_002844085.1| single-stranded DNA binding protein p30 subunit [Arthroderma otae
CBS 113480]
gi|238845387|gb|EEQ35049.1| single-stranded DNA binding protein p30 subunit [Arthroderma otae
CBS 113480]
Length = 276
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 51/285 (17%)
Query: 26 SADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEER 85
+A + +++ + +S+ + PVT+K +++A+ D +NF I+ +I V+ VG V N +
Sbjct: 7 AASHKATSPYAGESRSIRPVTIKQLNDATQPFPD-TNFKIDNADINQVSFVGQVRNVNKL 65
Query: 86 ASDVNFTLDDGTGRVVCKRW----ASEVFDTREMEA------------------------ 117
A+ + + LDDGTG K + E FD E+EA
Sbjct: 66 ATHITYKLDDGTGETDVKYFIPPEEKEAFD--ELEAMDVMAMDGPGSGAGAAGVTNKSGR 123
Query: 118 -----IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQV 172
I Y ++ N+K+F ++Q+ A +RPVT+ +E H++E HL +K
Sbjct: 124 PRASQITTNGYAKVFANVKTFNDRRQVNAVLIRPVTSMNEYHVHFLEATAVHLYFTK--- 180
Query: 173 QGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSE 232
G P + +SG S + + + + D L + S +
Sbjct: 181 -GPPPKAGGSGAGAGIGGGPKDMSG---------SNISLPRMSPTARKLYDALDK--SRQ 228
Query: 233 RERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKF 277
G+HVN L+ L++ ++ + L +IY T+DE +K
Sbjct: 229 TNEGMHVNVLAPILQVNVNEVYKAAEELLGLSIIYHTVDEDTWKI 273
>gi|254572660|ref|XP_002493439.1| Subunit of heterotrimeric Replication Protein A (RPA) [Komagataella
pastoris GS115]
gi|238033238|emb|CAY71260.1| Subunit of heterotrimeric Replication Protein A (RPA) [Komagataella
pastoris GS115]
gi|328354736|emb|CCA41133.1| Replication factor A protein 2 [Komagataella pastoris CBS 7435]
Length = 251
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGGF + D S +++ + PVT+K I+++ D F++NG+E+ V+
Sbjct: 15 GGGFT-TYNNNDGDGQGSQGKTQQRNTIKPVTIKQINDSKTIISDGE-FVVNGVELNMVS 72
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQ 134
VG++ N + S + T++DGTG + ++W E D E G YV + G LK F
Sbjct: 73 FVGIIRNVNDNTSSLTITIEDGTGSLDVRKWVDEGSDPSENNYPL-GQYVYVTGLLKEFN 131
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQ 166
KK + ++ P+ ++++VT HY+ I H++
Sbjct: 132 EKKSLQQATINPIEDYNQVTYHYLSAIKVHVE 163
>gi|440888615|gb|ELR44580.1| hypothetical protein M91_12762 [Bos grunniens mutus]
Length = 251
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 15/188 (7%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+S+S F + + S GGF P S S A++ Q +VP T+ + A+ +
Sbjct: 9 YSTSSFGGAGGYTQSPGGF--GSPTASQAKKKSRAQA---QHIVPCTISQLLSATLVDEI 63
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ N E+ A+++ + +DD T V ++W + + +
Sbjct: 64 ---FRIGNVEISRVTIVGIIRNAEKAATNIVYKIDDMTTVPVDVRQWVDTDDASSKNTVV 120
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG---- 174
YV++ G+L+SFQ KK +VAF + P+ + +E T H +E + H+ SKS Q
Sbjct: 121 PPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMMLSKSNSQPSAGR 180
Query: 175 FPSSQPQM 182
P S+P M
Sbjct: 181 APISKPGM 188
>gi|358366420|dbj|GAA83041.1| possible replication factor-a protein [Aspergillus kawachii IFO
4308]
Length = 286
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 39/276 (14%)
Query: 18 FMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVG 77
FMP + S PS +Q L P+T+K +A + + + I+ EI+++ +G
Sbjct: 21 FMPGEMNNS---PSGGKSDYANQTLRPITIKQALDAVQPYPE-APYQIDSAEISSICFIG 76
Query: 78 LVYNKEERASDVNFTLDDGTGRVVCKRW----ASEVFDTREME----------AIQDGMY 123
V N ++++V + +DDGTG + K+W ++ DT + ++ Y
Sbjct: 77 QVRNISSQSTNVTYKIDDGTGEIEAKQWIDSMTADSMDTDDAANPKAARGRDGKVELNGY 136
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHL------QNSKSQVQGFPS 177
++ G LKSF K+ + A VRPV N DEV CH +E HL + + G
Sbjct: 137 AKVFGKLKSFGNKRFVGAHCVRPVQNLDEVHCHLLEASAVHLFFTRGAPGAGAGAGGGVK 196
Query: 178 SQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERG 236
M + A G G P + + + L+ +P S+E G
Sbjct: 197 GDAAMGGTGDEYGAGAGGVGKNLPP-----------MSPVAKRVYQLLRTEPQSNE---G 242
Query: 237 VHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+H ++ +L +P + + L G+I+ST+DE
Sbjct: 243 LHAQLIAAKLSLPMPDVARAGDELLTAGVIFSTVDE 278
>gi|219112023|ref|XP_002177763.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410648|gb|EEC50577.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 270
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 132/259 (50%), Gaps = 40/259 (15%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN------VTLVGLVYNKEERASD 88
RS D Q +VPVT++M A D+ + + GL++ + V V V + E+ +++
Sbjct: 36 RSYDEQTMVPVTIRMCLGAM---PDEISEGVGGLQLEDGRRLYHVRFVAAVRSFEDFSTN 92
Query: 89 VNFTLDDGTGRVVCKRW-----ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFS 143
V +TL+DGTG + K+W + + + R+ +++ +Y++++G +K + GKK +VA S
Sbjct: 93 VVYTLEDGTGLMEVKQWLDDNHCTAIAEMRQ-HTLKENIYLKVVGQIKEYDGKKMVVAES 151
Query: 144 VRPVTNFDEVTCHYIECIY----FHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQ 199
+R ++ +E+ H +E +Y F ++S + Q M+ NT+ G
Sbjct: 152 IRVLSTGNELAHHMLEVVYAGETFKRKDS------IVAPQSSMM---FNTNTVKG----- 197
Query: 200 TAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIAS 259
+ L + G KD +L +++ + + GV ++ + + P ++ ++A
Sbjct: 198 ---SALHANSSDGGWKD---ELLRFIRME-GDKSDMGVSIDACIKYIGRPSSEVHQAVAD 250
Query: 260 LENEGLIYSTIDEFHYKFA 278
+ G +YSTIDE +YKFA
Sbjct: 251 FSSNGNLYSTIDENYYKFA 269
>gi|6324017|ref|NP_014087.1| Rfa2p [Saccharomyces cerevisiae S288c]
gi|132475|sp|P26754.1|RFA2_YEAST RecName: Full=Replication factor A protein 2; Short=RF-A protein 2;
AltName: Full=DNA-binding protein BUF1; AltName:
Full=Replication protein A 36 kDa subunit
gi|4314|emb|CAA42421.1| replication factor-A protein 2 [Saccharomyces cerevisiae]
gi|410539|gb|AAB27888.1| BUF1 [Saccharomyces cerevisiae]
gi|1302417|emb|CAA96241.1| RFA2 [Saccharomyces cerevisiae]
gi|151944237|gb|EDN62516.1| replication factor RF-A subunit 2 [Saccharomyces cerevisiae YJM789]
gi|190409276|gb|EDV12541.1| Replication factor-A protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|259149060|emb|CAY82301.1| Rfa2p [Saccharomyces cerevisiae EC1118]
gi|285814355|tpg|DAA10249.1| TPA: Rfa2p [Saccharomyces cerevisiae S288c]
gi|349580640|dbj|GAA25799.1| K7_Rfa2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296861|gb|EIW07962.1| Rfa2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 273
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 39/292 (13%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQP-PQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
M + ++ ++ +GGGF S+ P S + ++T + L PVT+K I E+ D
Sbjct: 1 MATYQPYNEYSSVTGGGFENSESRPGSGESETNTRVNT----LTPVTIKQILESKQDIQD 56
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD-------- 111
F+ + E+ +V VG+V N + +++ T++DGTG++ ++W+ + D
Sbjct: 57 GP-FVSHNQELHHVCFVGVVRNITDHTANIFLTIEDGTGQIEVRKWSEDANDLAAGNDDS 115
Query: 112 ------TREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHL 165
++ + + G YV++ G LK F GKK I ++P+ +F+EV H++E I H
Sbjct: 116 SGKGYGSQVAQQFEIGGYVKVFGALKEFGGKKNIQYAVIKPIDSFNEVLTHHLEVIKCHS 175
Query: 166 QNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYL 225
S Q S+ S G S + + SS G L Q IL++
Sbjct: 176 IASGMMKQPLESA-----------SNNNGQSLFVKDDNDTSS--GSSPL----QRILEFC 218
Query: 226 QQPSSSERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
++ + V + +S+ L + + + + +L ++G IY T D+ ++
Sbjct: 219 KKQCEGKDANSFAVPIPLISQSLNLDETTVRNCCTTLTDQGFIYPTFDDNNF 270
>gi|256269456|gb|EEU04747.1| Rfa2p [Saccharomyces cerevisiae JAY291]
Length = 274
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 134/286 (46%), Gaps = 39/286 (13%)
Query: 7 FDASNAFSGGGFMPSQP-PQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMI 65
++ ++ +GGGF S+ P S + ++T + L PVT+K I E+ D F+
Sbjct: 8 YNEYSSVTGGGFENSESRPGSGESETNTRVNT----LTPVTIKQILESKQDIQDGP-FVS 62
Query: 66 NGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD-------------- 111
+ E+ +V VG+V N + +++ T++DGTG++ ++W+ + D
Sbjct: 63 HNQELHHVCFVGVVRNITDHTANIFLTIEDGTGQIEVRKWSEDANDLAAGNDDSSGKGYG 122
Query: 112 TREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ 171
++ + + G YV++ G LK F GKK I ++P+ +F+EV H++E I H S
Sbjct: 123 SQVAQQFEIGGYVKVFGALKEFGGKKNIQYAVIKPIDSFNEVLTHHLEVIKCHSIASGMM 182
Query: 172 VQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSS 231
Q S+ S G S + + SS G L Q IL++ ++
Sbjct: 183 KQPLESA-----------SNNNGQSLFVKDDNDTSS--GSSPL----QRILEFCKKQCEG 225
Query: 232 ERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ V + +S+ L + + + + +L ++G IY T D+ ++
Sbjct: 226 KDANSFAVPIPLISQSLNLDETTVRNCCTTLTDQGFIYPTFDDNNF 271
>gi|402082744|gb|EJT77762.1| replication protein A 32 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 278
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 16/238 (6%)
Query: 39 SQGLVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDG 96
++ L PVT+K + +E ++SG + +++G + VT VG V +A+++ + +DDG
Sbjct: 45 NESLRPVTIKQLYSTEEAYSG---AELVLDGNPLAQVTFVGQVRQVNPQATNITYRIDDG 101
Query: 97 TGRVVCKRW--ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
TG + K+W + + DT E +VR+ G LK Q ++ + A +R V +F+EV+
Sbjct: 102 TGSIDVKKWIDSQSMTDTDPAELHPLDSFVRVWGKLKHLQDRRHVGATFMRNVDDFNEVS 161
Query: 155 CHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGL 214
H +E Y HL + ++ S+ DS + Y + G
Sbjct: 162 YHMLEAAYVHLYFANAKSGAEASAGGGGDDSMF-------VDSYGDSHGGGGGAAKAKGC 214
Query: 215 KDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
Q I Y+Q ++ HV +S+ + +P ++ + L +GLIY+T+D+
Sbjct: 215 SANAQRIFGYMQNQAAGNDGMEAHV--ISKGIGMPVNTVLAAADELVTQGLIYTTLDD 270
>gi|330947856|ref|XP_003306986.1| hypothetical protein PTT_20305 [Pyrenophora teres f. teres 0-1]
gi|311315220|gb|EFQ84924.1| hypothetical protein PTT_20305 [Pyrenophora teres f. teres 0-1]
Length = 288
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSN--FMINGLEITNVTLVGLVYNKEERASDVNFT 92
R L PVT+K I EA S+ I+G ++ +TLVG + N + ++ +
Sbjct: 42 RDHSQDSLRPVTIKQILEAQGEAGSSSDQILKIDGAVLSQLTLVGQIRNISNQTTNNTYR 101
Query: 93 LDDGTGRVVCKRW----ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
LDDGTG + K W +SE + + + ++ G Y R G LK F ++ + A +RP+
Sbjct: 102 LDDGTGSIEVKVWVDSDSSEQPNPTKAKLVE-GAYCRAWGKLKIFNDRRSVGATVIRPIE 160
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
+ +E++ H +E HL ++ P Q ++ N + Q +
Sbjct: 161 DMNEISFHLLEATAVHLHFTRG-----PPGGAQTAGANANGAVGQQQQQQQQQQAAGGNY 215
Query: 209 FGVD--GLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGL 265
G D + + YL++ P S+E G++ +E++ +L I + + L + GL
Sbjct: 216 GGYDLTAYGQVAKKVFQYLREAPQSNE---GLNQHEIAAKLGIDTADVAKAGDELLSGGL 272
Query: 266 IYSTIDE 272
IY+T+D+
Sbjct: 273 IYTTVDD 279
>gi|323335966|gb|EGA77243.1| Rfa2p [Saccharomyces cerevisiae Vin13]
Length = 302
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 39/286 (13%)
Query: 7 FDASNAFSGGGFMPSQP-PQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMI 65
++ ++ +GGGF S+ P S + ++T + L PVT+K I E+ D F+
Sbjct: 36 YNEYSSVTGGGFENSESRPGSGESETNTRVNT----LTPVTIKQILESKQDIQDGP-FVS 90
Query: 66 NGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD-------------- 111
+ E+ +V VG+V N + +++ T++DGTG++ ++W+ + D
Sbjct: 91 HNQELHHVCFVGVVRNITDHTANIFLTIEDGTGQIEVRKWSEDANDLAAGNDDSSGKGYG 150
Query: 112 TREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ 171
++ + + G YV++ G LK F GKK I ++P+ F+EV H++E I H S
Sbjct: 151 SQVAQQFEIGGYVKVFGALKEFGGKKNIQYAVIKPIDXFNEVLTHHLEVIKCHSIASGMM 210
Query: 172 VQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSS 231
Q S+ S G S + + SS G L Q IL++ ++
Sbjct: 211 KQPLESA-----------SNNNGQSLFVKDDNDTSS--GSSPL----QRILEFCKKQCEG 253
Query: 232 ERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ V + +S+ L + + + + +L ++G IY T D+ ++
Sbjct: 254 KDANSFAVPIPLISQSLNLDETTVRNCCTTLTDQGFIYPTFDDNNF 299
>gi|307189877|gb|EFN74121.1| Replication protein A 32 kDa subunit [Camponotus floridanus]
Length = 239
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 98/190 (51%), Gaps = 20/190 (10%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDS-QGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
GGGF+ + + +S+DS + + PV +K I+ A+ G I G + +
Sbjct: 10 GGGFL-----DESTQGGTAKKSQDSDKSIAPVMIKHITSATGDG-----LQIAGKTVNTL 59
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAI--QDGMYVRLIGNLK 131
T VG++ N E+ + ++F++ D TG V +W D +E+I Q YVR+ G ++
Sbjct: 60 TFVGVIRNIEQDTTKISFSIQDDTGTVTAVKWLEA--DKNPLESICTQINTYVRIYGLIR 117
Query: 132 SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSA 191
+ ++ ++ + P+ + +E+TCH++E IYF L+ K + S+ P D+++
Sbjct: 118 NQNNQQHVLIVRMFPLEDLNELTCHFMEVIYFILKAKKPAEESTLSNLPTTFDNTM---- 173
Query: 192 RTGLSGYQTA 201
+G+S Q A
Sbjct: 174 -SGMSSEQVA 182
>gi|260940074|ref|XP_002614337.1| hypothetical protein CLUG_05823 [Clavispora lusitaniae ATCC 42720]
gi|238852231|gb|EEQ41695.1| hypothetical protein CLUG_05823 [Clavispora lusitaniae ATCC 42720]
Length = 294
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 116/267 (43%), Gaps = 30/267 (11%)
Query: 13 FSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
+ GGF S Q +Y +S + L PVT+K I++A+ D F++N + +
Sbjct: 51 YGDGGF--STDAQFNEYNTSQRAQQTRSTLSPVTIKQINDATQPVSD-GEFVVNNVSLNM 107
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREME----AIQDGMYVRLIG 128
V+ VG+V E S T++DGTG V +RW E T E + + YV + G
Sbjct: 108 VSFVGVVRKVENTTSAHTITIEDGTGSVDVRRWVDEKVTTAAQETERFSALENKYVYVTG 167
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLN 188
LK F KK + ++R +T+ +EV H + I HL + QG ++P+
Sbjct: 168 ALKEFNQKKNVQHATIREITDHNEVLYHMLYAISNHL-----EAQGLMKTEPK------- 215
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKI 248
A GL T+ ++ G+D L M L PS E GV +S+ L +
Sbjct: 216 --AENGLFVQGTS----AAGSGLDVLDKI--MALIAANTPSMPE---GVPTTWISDNLGL 264
Query: 249 PQKKIMDSIASLENEGLIYSTIDEFHY 275
++ + L IY DE Y
Sbjct: 265 SVDEVKEKCHQLSEMAKIYQGYDEASY 291
>gi|410730457|ref|XP_003671408.2| hypothetical protein NDAI_0G03880 [Naumovozyma dairenensis CBS 421]
gi|401780226|emb|CCD26165.2| hypothetical protein NDAI_0G03880 [Naumovozyma dairenensis CBS 421]
Length = 284
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 40/287 (13%)
Query: 12 AFSGGGFMPSQP-PQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEI 70
+ +GGGF + QS D + ++ L PVTVK I E++ D F+ E+
Sbjct: 12 SVTGGGFETNDVVGQSGD----VSDRSNTNTLRPVTVKQILESTQEIQDGP-FVSYNQEL 66
Query: 71 TNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD----------------TRE 114
+V VG++ N + S++ T++DGTG++ ++W+ + D ++
Sbjct: 67 HHVCFVGVIRNITDHTSNIYLTVEDGTGQIEVRKWSEDANDMASGPGDDSDPTKDSSSQV 126
Query: 115 MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFH-LQNSKSQVQ 173
+ Q G YV++ G LK F GKK I ++ + +F+EV H++E I +H + N K
Sbjct: 127 AQQYQIGTYVKIFGALKEFGGKKNIQYAVIKNIESFNEVLTHHLEVIKWHAIANGK---- 182
Query: 174 GFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLS---SQFGVDGLKDCDQMILDYLQQPSS 230
+ D S S+ G Q + + S S+ + IL++ ++
Sbjct: 183 --------LPDPSTGGSSSQVQEGQQQSTSGQSLFVSENDSSSSRSPSDRILEFCKKQCE 234
Query: 231 SERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ V + +S+ L I + + A+L +G IY T D+ H+
Sbjct: 235 GKDANTFAVPIPLISQSLNIDENTTRNCCATLTEQGFIYPTFDDNHF 281
>gi|146422268|ref|XP_001487075.1| hypothetical protein PGUG_00452 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 13 FSGGGFMPSQPPQ-SADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEIT 71
F GGF + AD S + + PVT+K + +A G D +F IN +E+
Sbjct: 9 FGDGGFSDTATGGFQADVDGSQKPQQTRSSITPVTIKQVIQAVALGPDL-DFRINNVELN 67
Query: 72 NVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREME--AIQDGMYVRLIGN 129
V ++G++ + AS VN T++DG+G + ++W E E E ++ YV + G
Sbjct: 68 MVRVIGVLRKVDTNASAVNLTIEDGSGSMEVRKWTDETASAAEAEKYSLYLNQYVSVSGA 127
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
LK F KK I ++RP+ + ++V H++ I HL+ V+ P ++
Sbjct: 128 LKEFNNKKGIQQATIRPILDHNQVIYHHLSAISHHLKAQGLHVRRKPENE 177
>gi|403417907|emb|CCM04607.1| predicted protein [Fibroporia radiculosa]
Length = 1266
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 121/243 (49%), Gaps = 22/243 (9%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
L PVT+K + +A+ D + +MI EI +T+V V + + + ++ + LDDGTGR
Sbjct: 1019 HSLRPVTIKQLIDATQPHSD-AEWMIEDAEIGQITIVAQVISIQSQTTNCVYWLDDGTGR 1077
Query: 100 VVCKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYI 158
+ + W ++ D + +G YVR++G++K+F K+ I A +R ++ E+ H +
Sbjct: 1078 MEARHWVDAQEEDQDRWAGVAEGKYVRVMGSVKTFGNKRYINAQHLRAASDPHELYFHLL 1137
Query: 159 ECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG----- 213
E + + ++G P +P S + R ++ QT+ + ++Q V
Sbjct: 1138 EAMTV----TTVMIKG-PIPRP----SEAGMAPRGAMANGQTSTSAYAAQSHVSASNSQY 1188
Query: 214 --LKDCDQMILDY-LQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTI 270
L D + I+++ L QP+S E G+HV ++ + + I +++ L +EG
Sbjct: 1189 AHLPDTQRKIVEFLLSQPTS---EDGIHVAAIARAIGGQARDISEALDRLMDEGHPEGNN 1245
Query: 271 DEF 273
D+F
Sbjct: 1246 DQF 1248
>gi|307211053|gb|EFN87305.1| Replication protein A 32 kDa subunit [Harpegnathos saltator]
Length = 238
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
++ S+ GGGF+ + A+S D + +VPV +K I+ S +GD I
Sbjct: 2 WNESSVGLGGGFLDESVSGAQTGGKKGAQSND-RSIVPVLIKQIT--STTGD----LQIA 54
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRL 126
G + +T VG+V + E+ + +++ + D T + W D +E IQ YVR+
Sbjct: 55 GKTVNTLTFVGIVRHIEQETTKISYHIQDDTDTLTAMMWLEA--DKNSIEDIQINTYVRV 112
Query: 127 IGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSS 186
G ++ ++ I+ + P+ + +E+TCH++E IYF L+ S+ P+ + M D
Sbjct: 113 HGLIRDQNNQRHILILRIYPLEDLNELTCHFVEVIYFMLKFSR------PAEESAMPDML 166
Query: 187 LNTSARTGLSGYQ 199
++ + +G+S Q
Sbjct: 167 MSDNTMSGMSPEQ 179
>gi|393244248|gb|EJD51760.1| nucleic acid-binding protein, partial [Auricularia delicata
TFB-10046 SS5]
Length = 226
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCK 103
PVT++M+ A + D F I+GL + +VT+VG V E+ + ++L+D TG++ +
Sbjct: 4 PVTIRMLMGAESTLPDW-GFKIDGLMLESVTIVGKVLQVEKTDTGRRYSLEDSTGQMETR 62
Query: 104 RWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY 162
W S+ + E + D +YVR+IG LK FQGK+ + A +VR VT+ E+ H ++ I
Sbjct: 63 CWIDSQAASIAQDEEVVDNVYVRVIGTLKEFQGKRLLHATTVRRVTDDHEIFAHTLDVIA 122
Query: 163 FHLQNSKSQVQG 174
++ NSK + G
Sbjct: 123 TYVLNSKGRAAG 134
>gi|255580401|ref|XP_002531027.1| conserved hypothetical protein [Ricinus communis]
gi|223529380|gb|EEF31344.1| conserved hypothetical protein [Ricinus communis]
Length = 80
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 8/84 (9%)
Query: 146 PVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNL 205
P+T+F+E+T H+IECIY H N+K ++G ++QPQ+ S++NT L GYQT P N
Sbjct: 1 PITDFNEITSHFIECIYVHFYNTK--IRG-ATTQPQLASSTMNTP----LKGYQTGPQNQ 53
Query: 206 SSQF-GVDGLKDCDQMILDYLQQP 228
+S F G DG+ + Q+IL++LQQP
Sbjct: 54 ASAFSGADGVNNVGQLILNFLQQP 77
>gi|242088237|ref|XP_002439951.1| hypothetical protein SORBIDRAFT_09g023290 [Sorghum bicolor]
gi|241945236|gb|EES18381.1| hypothetical protein SORBIDRAFT_09g023290 [Sorghum bicolor]
Length = 242
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 30/237 (12%)
Query: 43 VPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVC 102
+ VT+KMI +A D+ +IN ++ V L G++ E+ ++ + DGTG +
Sbjct: 34 MKVTIKMIRDACGESRDQGRLVINESQVFTVELCGMLTRIEQHERWTDYEIYDGTGSIRS 93
Query: 103 KRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY 162
+ W + +M + G Y + G G I R VTN++ VT H + I+
Sbjct: 94 RIWPRDEDGYTDMSGSRVGGYYAVNGTCTVIDGDAMINTLIAREVTNYNSVTEHMLSVIH 153
Query: 163 FHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQM-I 221
HL+ G++ + + + G D D+ +
Sbjct: 154 EHLE-----------------------------LGHRLSSNRIVDRMGTKAQLDIDKEGV 184
Query: 222 LDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
L L E+E G+ + + ++ + + + + L NEGL+Y+T+DE+HYK A
Sbjct: 185 LMLLSSDEEREKEDGLTEDYIRAKMGLDRDNMRKVLDGLINEGLVYNTVDEYHYKMA 241
>gi|358054148|dbj|GAA99684.1| hypothetical protein E5Q_06386 [Mixia osmundae IAM 14324]
Length = 253
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 24/245 (9%)
Query: 34 ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTL 93
A+ + PVT+ M++ A G ++ + +G+EI NV ++ LV + +++ +L
Sbjct: 23 AKQKGDGHCTPVTLAMVTSAEQ-GHAEAPYTYDGVEIGNVEVIALVEDLNAASTNATLSL 81
Query: 94 DDGTGRVVCKRWASEVFDTR-EMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
DDGTGR + W ++ ++E I+ G V +IG LK F K+ I VRPV + +E
Sbjct: 82 DDGTGRADARVWLENGAESSYQLEGIEKGTTVHVIGGLKDFNSKRSINIVHVRPVHDPNE 141
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSART--GLSGYQTAPTNLSSQFG 210
H + + LQ + T ART G + Y+ A +
Sbjct: 142 EAYHRLRVAHLQLQRKRP------------------TGARTGPGANAYRAAGIIDGDEAA 183
Query: 211 VDGLKDCDQMILDYLQQ--PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYS 268
L + I+ YL++ S + GV +L+ Q I + + SL ++G I+
Sbjct: 184 FASLTAKGKKIMLYLKELKDSGAIGGGGVAEEQLARQTGISLQDVKAEAISLSDDGQIFE 243
Query: 269 TIDEF 273
+ F
Sbjct: 244 MDEGF 248
>gi|321464445|gb|EFX75453.1| hypothetical protein DAPPUDRAFT_226387 [Daphnia pulex]
Length = 275
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 136/284 (47%), Gaps = 21/284 (7%)
Query: 1 MFSSSQFDASNAFSGGGFM-PSQPPQSADYPS-STARSRDSQGLVPVTVKMISEASHSGD 58
M+ S D N GGF P + + P ++ + ++PV +K I + D
Sbjct: 1 MWDQSASDFGNGTMAGGFFNAGTPGGTVNTPGEKKGGAQRAHNIIPVNIKDILDEV---D 57
Query: 59 DKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAI 118
+K I E VT VG V E + ++V++T+ D TG + +W + + +
Sbjct: 58 EK--LKIEDTEAHMVTFVGTVEQIESKQTNVSYTVRDDTGSIEVVQWIEGEGNVQSPFQV 115
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
+G + R++G+++ Q ++ ++AF V +T +E+T H +E + ++ + + + +
Sbjct: 116 VEGNFCRVVGSIRQTQDRRHVMAFRVAKLTTANEITTHLLETQWVRMKLRQMKRKMGEGT 175
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
M +S + L+ +A +N+++ + GL M+ +Q ++ E G+
Sbjct: 176 GQSMNNSVMGGGMTGPLASSSSATSNVANGI-MSGLSSFQSMVYTIIQATTA---ETGME 231
Query: 239 VNELSEQLK---IPQKKIMDSIASLE---NEGLIYSTIDEFHYK 276
+++ ++ IP+ D A+LE +EG IYST+DE H+K
Sbjct: 232 KSQIYNSVRGRMIPR----DVDAALEFLCSEGHIYSTVDEDHFK 271
>gi|358054147|dbj|GAA99683.1| hypothetical protein E5Q_06387 [Mixia osmundae IAM 14324]
Length = 252
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCK 103
PVT+ M++ A G ++ + +G+EI NV ++ LV + +++ +LDDGTGR +
Sbjct: 32 PVTLAMVTSAEQ-GHAEAPYTYDGVEIGNVEVIALVEDLNAASTNATLSLDDGTGRADAR 90
Query: 104 RWASEVFDTR-EMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY 162
W ++ ++E I+ G V +IG LK F K+ I VRPV + +E H + +
Sbjct: 91 VWLENGAESSYQLEGIEKGTTVHVIGGLKDFNSKRSINIVHVRPVHDPNEEAYHRLRVAH 150
Query: 163 FHLQNSKSQVQGFPSSQPQMVDSSLNTSART--GLSGYQTAPTNLSSQFGVDGLKDCDQM 220
LQ + T ART G + Y+ A + L +
Sbjct: 151 LQLQRKRP------------------TGARTGPGANAYRAAGIIDGDEAAFASLTAKGKK 192
Query: 221 ILDYLQQ--PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEF 273
I+ YL++ S + GV +L+ Q I + + SL ++G I+ + F
Sbjct: 193 IMLYLKELKDSGAIGGGGVAEEQLARQTGISLQDVKAEAISLSDDGQIFEMDEGF 247
>gi|395854822|ref|XP_003799878.1| PREDICTED: replication protein A 32 kDa subunit isoform 2 [Otolemur
garnettii]
Length = 174
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 102 CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
++W E + YV++ G+L+SFQ KK +VAF + P+ + +E T H +E +
Sbjct: 8 VRQWVDTDDTGSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTAHILEVV 67
Query: 162 YFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMI 221
H+ SK+ Q P P S+ S G P N GL +
Sbjct: 68 NAHMTLSKANSQPPPGRVPI---SNPGMSEAGSFGGTSFMPAN--------GLTAAQNQV 116
Query: 222 LDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
L+ ++ + R G++ +L QLK +P I ++ L NEG IYST+D+ H+K
Sbjct: 117 LNLIK---ACPRPEGLNFYDLKNQLKHMPVASIKQAVDFLSNEGHIYSTVDDDHFK 169
>gi|315045856|ref|XP_003172303.1| hypothetical protein MGYG_04892 [Arthroderma gypseum CBS 118893]
gi|311342689|gb|EFR01892.1| hypothetical protein MGYG_04892 [Arthroderma gypseum CBS 118893]
Length = 273
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 50/273 (18%)
Query: 38 DSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGT 97
+S+ + PVT+K +++A+ + + +NF I+ +I V+ VG V N + A+ + + LDDGT
Sbjct: 15 ESRSVRPVTIKQLNDATQAFPE-ANFKIDNADINQVSFVGQVRNVNKLATHITYKLDDGT 73
Query: 98 GRVVCKRWA----SEVFDTREMEA-----------------------------IQDGMYV 124
G K + E FD E+EA I Y
Sbjct: 74 GETDVKYFIPPEEKEAFD--ELEAMDVMAMDGAGSGAGPAAVTNKSGRPRAYQITTNGYA 131
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVD 184
++ N+K+F ++Q+ A +RP+TN +E H++E HL F P
Sbjct: 132 KVFANIKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLY--------FTKGPPPKAG 183
Query: 185 SSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSE 244
+ G T +NLS + + + + D L +S + G+HVN L+
Sbjct: 184 GASGAGGGAGGGAMDTGASNLS----LPRMSPMARKLYDALS--NSRQTNEGMHVNVLAP 237
Query: 245 QLKIPQKKIMDSIASLENEGLIYSTIDEFHYKF 277
+++ ++ + L +IY T+DE +K
Sbjct: 238 IMQVNVNEVYKAAEELLGLSVIYHTVDEDTWKI 270
>gi|410077445|ref|XP_003956304.1| hypothetical protein KAFR_0C01760 [Kazachstania africana CBS 2517]
gi|372462888|emb|CCF57169.1| hypothetical protein KAFR_0C01760 [Kazachstania africana CBS 2517]
Length = 283
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDK 60
M + ++ ++ +GGGF S ++ ST + L PVT+K I + D
Sbjct: 1 MATYQPYNEHSSITGGGFEHSD--NRSNTNDSTNNTSRPNTLTPVTIKQILNSVQEIQDG 58
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEV----------- 109
F+ NG E+ V+ VG++ N + A+++ T++DGTG++ K+W+ +
Sbjct: 59 P-FVTNGQELHYVSFVGVIRNITDHATNIFITIEDGTGQIDVKKWSDDATDMTASQENSD 117
Query: 110 -----FDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFH 164
++++ + Q G YV + G LK F GKK I ++ V +F+E+ H++E I ++
Sbjct: 118 QQEKEYNSQVAQQYQVGTYVTVYGALKEFGGKKNIQYAVIKNVDSFNEIIAHHLEVIKWY 177
>gi|395333488|gb|EJF65865.1| replication protein A subunit RPA32 [Dichomitus squalens LYAD-421
SS1]
Length = 283
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 30/279 (10%)
Query: 15 GGGFMP--SQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
GGG+M SQ P + R S L PV++K + EA+ D +++ I +E+
Sbjct: 13 GGGYMSQNSQFGSGGGSPGGSGRRAASHSLRPVSLKQLVEATIEHSD-ADWKIGDVEVGQ 71
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
VT+V V + + + ++ + LDDGT + ++W + + DG YVR++G LK
Sbjct: 72 VTVVAHVLSVQAQTTNCVYLLDDGTAQFEARQWVDANNEEDGSNRVADGRYVRVLGTLKM 131
Query: 133 FQGKKQIVA---FSVRPVTNFDEVTCHYIEC----IYFHLQNSKSQVQGFPSSQPQMVDS 185
F K+ I A + P DE+ H E I F +G +S+ V+
Sbjct: 132 FGQKRYITATHIIEIPPERVCDELCFHIAEAAMMSIIFERGPPPRPSEGSTTSR---VNG 188
Query: 186 SLN-TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYL-QQPSSSERERGVHVNELS 243
+ N TSA + S TA N S+Q+ GL + I+++L QP ++E G HV ++
Sbjct: 189 AANPTSAYSASS--NTAGAN-SAQYA--GLSQLQRQIVEFLISQPKTNE---GTHVGAIA 240
Query: 244 EQLK-------IPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ + I ++ L ++G +Y+T+D+ H+
Sbjct: 241 RHIASLSGGAPVNADNISKALDDLSDQGHVYTTVDDSHF 279
>gi|149568055|ref|XP_001518418.1| PREDICTED: replication protein A 32 kDa subunit-like
[Ornithorhynchus anatinus]
Length = 244
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 12 AFSGGGFMPSQPPQSADYPSST-----ARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
+F+GG + +Q P PS++ +RSR +Q +VP TV + A+ + F I
Sbjct: 16 SFTGGSY--TQSPGGFGSPSASQFEKKSRSR-AQHIVPCTVSQLLAATQV---EETFRIG 69
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVR 125
+EI+ VT+VG++ + E+ +++ + +DD T + ++W + E I YV+
Sbjct: 70 NIEISQVTIVGIIRHAEKAPTNIVYKVDDMTAAPMDVRQWVDTDEISSENIVIPPETYVK 129
Query: 126 LIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK 169
+ G+L+SFQ +K +VAF + P+ + +E+T H +E + H SK
Sbjct: 130 VAGHLRSFQNRKSLVAFKIIPLEDMNELTTHILETVNAHQTLSK 173
>gi|326487640|dbj|BAK05492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 158
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%)
Query: 68 LEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLI 127
+ +++V L+G+V NK F L DGTG V W D+++ + +GMYVR++
Sbjct: 1 MAVSSVELLGMVTNKTVSMDHCTFDLYDGTGAVNVIYWFEGAQDSKDAWSFSNGMYVRVV 60
Query: 128 GNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK 169
G S + QI A+ VRP+ NF++VT H+I CIY H+ S+
Sbjct: 61 GRTTSMEQFFQIKAYIVRPINNFNDVTHHFIYCIYAHIDISR 102
>gi|154286486|ref|XP_001544038.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407679|gb|EDN03220.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 247
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 28/233 (12%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K +A+ + D ++F I+G E++ VT VG V + V + LDDGTG +
Sbjct: 29 LRPVTIKQTLDATQAHGD-ADFKIDGTEVSQVTFVGQVRAVSHLTTFVTYKLDDGTGEIE 87
Query: 102 CKRW--------ASEVFDT----REMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
K W + DT R E+ I Y ++ G L +F ++ VA +RP+T
Sbjct: 88 VKLWLEKNAVNPTGDDMDTGDAPRSSESEIPINGYAKVWGKLNNFNNRRNFVAHVIRPIT 147
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
N DE CH++E HL ++ V G ++ + + + + S L+G P + ++
Sbjct: 148 NIDEYNCHFLEATAIHLYYTRGPVGGHLGNE-RPLPGATHPSGGGPLAGKTLPPMSPLAR 206
Query: 209 FGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLE 261
+ L + P S+E G+HV L+ + +P + ++A LE
Sbjct: 207 KMYETLSNT----------PQSNE---GLHVQHLASLMGLPVGRDDSTLAILE 246
>gi|353243302|emb|CCA74860.1| related to RFA2-DNA replication factor A, 36 kDa subunit
[Piriformospora indica DSM 11827]
Length = 292
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 131/283 (46%), Gaps = 32/283 (11%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GG+ P A T R + +Q L P++++ + A ++++ ++G+ ++ +
Sbjct: 22 SPGGYASQGSPHGA----GTER-KQTQSLRPLSIRQVLLAEQGSHTETDYTLDGVTLSMI 76
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWA-SEVFDTREMEAIQDGM---YVRLIGN 129
++VG + N + + + ++DG+ + + W S+ D+ +ME+ + + +V++ G
Sbjct: 77 SIVGQIINHTSQTTSDVYKINDGSAEIEARHWNDSKGTDSMDMESDESPLLNKFVKITGT 136
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS--QPQMVDSSL 187
+++FQ ++ I A VR + + E HY E I + G SS P +S
Sbjct: 137 IRTFQERRHINAIIVRALDDPMEAYFHYTEAIAMAMLAKFGPPNGSGSSLGAPMTGGASA 196
Query: 188 NTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ-QPSSSERERGVHVNELSEQL 246
+ +R G S ++ + V D+ I+ +++ P +SE G HV ++ + +
Sbjct: 197 SDYSRQGTSRQTNEVDSMYAHLAV-----LDRGIIRFIKDNPPTSE---GYHVRQIIKAV 248
Query: 247 KI------------PQKKIMDSIASLENEGLIYSTIDEFHYKF 277
K P +I L EGL++ST+DE HY
Sbjct: 249 KPLVNEETSKTGEDPADAFAAAIQRLIEEGLLFSTLDEHHYNL 291
>gi|171690528|ref|XP_001910189.1| hypothetical protein [Podospora anserina S mat+]
gi|170945212|emb|CAP71323.1| unnamed protein product [Podospora anserina S mat+]
Length = 284
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 36/257 (14%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
RS + L PVT+K I +A +G ++S I+G ++ VTLVG V + + + +++ + +D
Sbjct: 37 RSTIDEYLRPVTIKQIHDAK-AGYNESEITIDGFPVSTVTLVGQVRSVQPQTTNITYKID 95
Query: 95 DGTGRVV-CKRWASEVFDTREMEAIQDG--------MYVRLIGNLKSFQGKKQIVAFSVR 145
DGTG + K+W ++E + G +VR++G L SF GK + A VR
Sbjct: 96 DGTGGTIDVKKWV-------DLEKSESGAETPFSLDTWVRVLGRLSSFNGKIHVGAHHVR 148
Query: 146 PVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQ--------MVDS-SLNTSARTGLS 196
+ +++EV+ H +E Y H+ S+ + G P Q + DS S+ + G S
Sbjct: 149 VIDDYNEVSYHLLESTYVHVCISRG-LPGGPWPQKEGAAAGGHGGGDSDSMFIDSGNGYS 207
Query: 197 GYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERE-RGVHVNELSEQLKIPQKKIMD 255
G A + C + Q S R G++V ++ + ++ ++
Sbjct: 208 GDAAAANARVAS--------CSRQAKSLYQFMQSDPRSIEGINVADVMAGSGMGKRDVLA 259
Query: 256 SIASLENEGLIYSTIDE 272
+ L G++Y+T+D+
Sbjct: 260 AADELLGNGIVYTTVDD 276
>gi|313666984|gb|ADR72942.1| replication protein A2 [Brachionus ibericus]
Length = 260
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 37/249 (14%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
+VPVT + I+ S + S F N L + +VGL+ + +RA+D+ + +DD T +
Sbjct: 30 IVPVTGQTINLCSQVEGESSIFEYNHLRFNQMYIVGLIRSVIKRANDITYLIDDMTTNEI 89
Query: 102 CKRWASEVFDTREMEAIQ---------DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
+ ++ D +ME + + YV++ G +KS Q +K + AF + P+ +E
Sbjct: 90 HVKLQTD--DNDDMETDEPKAQHSQFIENQYVKVFGIIKSLQNQKVVQAFRILPLKELNE 147
Query: 153 VTCHYIEC----IYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
++ H ++C IY+ +G + QM ++ +G+S Y + +S
Sbjct: 148 ISHHILDCMNASIYY-------ITKGNDNFDMQM------SNPMSGVSAYGDNGGSSTSG 194
Query: 209 FGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIY 267
L I + ++Q +SE GVH+ E+ P+ KI +++ L EG +Y
Sbjct: 195 LSGLHLN-----ISNLIKQARNSE---GVHIREICSHFNNYPENKIREALEFLSTEGHVY 246
Query: 268 STIDEFHYK 276
STID+ H+K
Sbjct: 247 STIDDEHFK 255
>gi|390986565|gb|AFM35802.1| hypothetical protein, partial [Oryza eichingeri]
Length = 87
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 36 SRDSQGLVPVTVKMISEASHSG---DDKSNFMINGLEITNVTLVGLVYNKEERASDVNFT 92
SR + +P+TVK ISEA SG + + F+++G+E NV LVGLV K ER +DV+FT
Sbjct: 1 SRGASSTMPLTVKQISEAQQSGTTGEKGAPFVVDGVETANVRLVGLVSGKTERNTDVSFT 60
Query: 93 LDDGTGRVVCKRWASEVFDTREMEAIQ 119
+DDGTGR+ RW ++ D+ E +Q
Sbjct: 61 IDDGTGRLDFIRWVNDAADSAETAGVQ 87
>gi|367008190|ref|XP_003678595.1| hypothetical protein TDEL_0A00520 [Torulaspora delbrueckii]
gi|359746252|emb|CCE89384.1| hypothetical protein TDEL_0A00520 [Torulaspora delbrueckii]
Length = 283
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 131/272 (48%), Gaps = 42/272 (15%)
Query: 25 QSADYPSSTARSRDSQG----LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVY 80
++ D +++ S +QG L PVT+K I ++ D F+I+ E+ +V+ VG+V
Sbjct: 22 ETTDQRPNSSESGGAQGRFTTLTPVTIKQILQSQQQVQDGP-FVIDQQELFHVSFVGVVR 80
Query: 81 NKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD-----------------GMY 123
N + S+V T++DGTG++ K+W++ D ++ A QD G Y
Sbjct: 81 NIVDETSNVRLTIEDGTGQIDVKKWSA---DPNDVAASQDENLKKNYSSQVAQQYHIGTY 137
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI-YFHLQNSKSQVQGFPSSQPQM 182
V++ G LK F GK+ + ++ + +F+EV H++E I +F + N K F S+
Sbjct: 138 VKVFGALKEFGGKQHVQYALIKNIESFNEVITHHLEVIKWFTISNGK-----FSPSK--- 189
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERER--GVHVN 240
++ + A T +G P+ + + Q +L + ++ + + V V
Sbjct: 190 --ANADEQATTSNNG----PSLFVRESDSHDTGNPLQRVLAFCREQCAGKDPNNFAVQVQ 243
Query: 241 ELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+++ L + + + D +L +G IY TI++
Sbjct: 244 LIAQSLNLDETTVRDCCTTLTEQGFIYPTIND 275
>gi|393236050|gb|EJD43601.1| replication protein A, subunit RPA32 [Auricularia delicata
TFB-10046 SS5]
Length = 279
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 84/142 (59%), Gaps = 7/142 (4%)
Query: 44 PVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
PVT++M+ +E++H+ S F I+G ++ +VT+VG V E+ ++ ++L+D T ++
Sbjct: 46 PVTIRMLMGAESTHA---DSGFKIDGHKLESVTIVGKVLKVEKTDTNRRYSLEDSTDQIE 102
Query: 102 CKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
+ W S+ E + + + +YVR+IG LK+F K+ + A +VR VT+ E+ H ++
Sbjct: 103 ARYWIDSQATSIPEDDEVVEDVYVRVIGTLKAFNNKRSLHAATVRRVTDHHEIYAHNMDV 162
Query: 161 IYFHLQNSK-SQVQGFPSSQPQ 181
I +L N+K + G + PQ
Sbjct: 163 IATYLLNTKGAPTLGLNAPAPQ 184
>gi|367008012|ref|XP_003688735.1| hypothetical protein TPHA_0P01430 [Tetrapisispora phaffii CBS 4417]
gi|357527045|emb|CCE66301.1| hypothetical protein TPHA_0P01430 [Tetrapisispora phaffii CBS 4417]
Length = 264
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 45/283 (15%)
Query: 7 FDASNAFS-GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMI 65
+ A FS GGGF S + SS + + L PVT+K I E+ D F+I
Sbjct: 4 YQAYTEFSTGGGFDNS----DSRIGSSDGEVKRTNTLTPVTIKQILESKPLVQDGP-FVI 58
Query: 66 NGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDT----REMEAIQD- 120
+ E+ ++ VG++ N ++ + T++DGTG++ ++W+ + D + QD
Sbjct: 59 HNQELHSICFVGVIRNISDQTQSIFLTIEDGTGQIEVRKWSEDANDLAAGDEDKNGAQDS 118
Query: 121 --------GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFH-LQNSKSQ 171
G YV + G LK F GKK + ++ + +F+EV H++E I H + N K +
Sbjct: 119 QLSKQHEIGSYVIVYGALKEFGGKKNVQYAVIKNIKSFNEVIAHHLEVIKSHAIANGKMK 178
Query: 172 VQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSS 231
G + Q Q + + + A L Q ILD+ ++ +
Sbjct: 179 GVGASNDQGQQLFVTEGSDAGAPL-----------------------QRILDFCKEQCTG 215
Query: 232 ERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ V + +++ L + + + + +L +G IY T D+
Sbjct: 216 KDPNSFAVAIQLMTQTLNLDETVVRECCNTLTEQGYIYPTFDD 258
>gi|196015539|ref|XP_002117626.1| hypothetical protein TRIADDRAFT_32825 [Trichoplax adhaerens]
gi|190579795|gb|EDV19884.1| hypothetical protein TRIADDRAFT_32825 [Trichoplax adhaerens]
Length = 140
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR-V 100
L+PVTV + +A+ D + I+G E+ +T VG++ + E A+ + +DD T +
Sbjct: 1 LIPVTVAQLLKATE--DQGDTYQISGREVYQITFVGVIRSVTESAAYTQYAVDDMTKSPI 58
Query: 101 VCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
+RW + D YVR++G+L++ QG + ++A +++P+ + +E+T H +E
Sbjct: 59 SVRRWVDSEVSCNMYSTLADDTYVRVVGHLRALQGVRYVMAINIQPIEDCNEITYHILEV 118
Query: 161 IYFHLQNSK 169
I+ HL +K
Sbjct: 119 IHSHLLQTK 127
>gi|225680139|gb|EEH18423.1| single-stranded DNA binding protein Ssb2 [Paracoccidioides
brasiliensis Pb03]
Length = 285
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 28/245 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K +AS + D ++F I+G +++ + VG V + V + LDDGTG
Sbjct: 47 LRPVTIKQTQDASQAHGD-ADFKISGTDVSQIVFVGQVRAISHLTTFVTYKLDDGTGETE 105
Query: 102 CKRW--------ASEVFDTREM-----EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
K W + +TR+ IQ Y ++ G L +F ++ VA +RP+T
Sbjct: 106 VKLWLEKNAVNPTGDDMETRDAAHPSESEIQVNGYAKVWGKLNNFNNRRNFVAHVIRPIT 165
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQM-VDSSLNTSARTGLSGYQTAPTNLSS 207
N +E CH++E HL ++ G +P ++ + +G P + +
Sbjct: 166 NMNEYHCHFLEATAIHLYYTRGPPGGQQGDKPVAGTAPAVGGGGGSTFAGRVLPPLSPLA 225
Query: 208 QFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIY 267
+ + L D P S+E G+HV L+ + + ++ L + GLI+
Sbjct: 226 RKVYETLSDT----------PQSNE---GLHVQNLAALMGLSAGEVFKGGEELLSNGLIF 272
Query: 268 STIDE 272
T+D+
Sbjct: 273 PTVDD 277
>gi|198425641|ref|XP_002126474.1| PREDICTED: similar to p32-subunit of replication protein A [Ciona
intestinalis]
Length = 262
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+VP+ + E D S F + E++ VTLVG V E + + +DD TG
Sbjct: 40 HNIVPIFASHLKEIV---SDDSGFKLGNTEVSQVTLVGTVIQVEHSQTCNTYKVDDTTGF 96
Query: 100 VVCKRWASEVFDTR---EMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCH 156
V K W S D + ++G VR+ G ++ FQ + VR V + +E+T H
Sbjct: 97 VTVKHWNSFTEDEDAPVNEDVFEEGTPVRVFGQMRVFQKNITLNGLHVRKVEDLNEITVH 156
Query: 157 YIECIYFHLQNSKSQVQGF---PSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
+E ++F L + ++ +GF P+S SG+Q +N + G
Sbjct: 157 MLEVMHFKLA-TDAKKKGFDMGPTS-----------------SGFQGNVSNNDQSMDL-G 197
Query: 214 LKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDE 272
+ + +Q S+ + G+ + + LK + +I ++ L NEG IYSTID+
Sbjct: 198 MDSVQTQVWKLIQ---SATDDDGISITNIRSSLKGLNINQIKKAVDFLCNEGHIYSTIDD 254
Query: 273 FHYK 276
H+K
Sbjct: 255 DHFK 258
>gi|391333319|ref|XP_003741065.1| PREDICTED: replication protein A 32 kDa subunit-like [Metaseiulus
occidentalis]
Length = 265
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 31/254 (12%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R R L P+T I S +G+ + E V LVG+V + E + +D
Sbjct: 25 RQRAPPNLTPLTCADIH--SMTGE---RWTFGSHEAEKVCLVGVVRSIEISSLKATLVVD 79
Query: 95 DGTGR-VVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS------FQGKKQIVAFSVRPV 147
D TG V+C+ + + E+E + +GMY+++ G L+ + K I +R V
Sbjct: 80 DRTGPPVICQSMDT---NDAELERLNEGMYIKVFGTLRKQSVNRDEEMKTMINLIKLRAV 136
Query: 148 TNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSS 207
++ +EV+ H +EC+ Q + + + + + + L S +AP N +
Sbjct: 137 SSLNEVSLHMMECV---------QARVYYLTAEKRLQAILGESQAPSQPSKSSAPINNGT 187
Query: 208 QF---GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK---IPQKKIMDSIASLE 261
F GV GL QM+ +++ +++ + G+H+N+L +++ + +++ D++ L
Sbjct: 188 TFDDSGVPGLNRKQQMVYQAIKEAGANDSQ-GLHINKLLQKINMHGVSEREARDALEFLS 246
Query: 262 NEGLIYSTIDEFHY 275
NEG +Y+TIDE Y
Sbjct: 247 NEGHVYTTIDEDTY 260
>gi|300707613|ref|XP_002996007.1| hypothetical protein NCER_100966 [Nosema ceranae BRL01]
gi|239605263|gb|EEQ82336.1| hypothetical protein NCER_100966 [Nosema ceranae BRL01]
Length = 218
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 13 FSGGGFMPSQPPQSADYPS-STARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEIT 71
S G+ PS P + +Y T RS +T+K + A H D + ++ E++
Sbjct: 1 MSDLGYNPSSPKK--EYTGIKTIRS--------LTIKQVLSAEHE-DGSTVIYVDNKELS 49
Query: 72 NVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLK 131
+ ++G VY+ + S F ++DGTG + C WA+ ++ I+DG+ VR++G LK
Sbjct: 50 TLKIIGWVYSVKSTNSGKTFIVEDGTGEIECMLWANRAYEEYMASFIEDGILVRIVGTLK 109
Query: 132 SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQV 172
F GKK I ++ V +++E+ H I + HL SK ++
Sbjct: 110 EFLGKKNITVSNIYVVEDYNELLYHMITAVKDHL--SKKEI 148
>gi|194766307|ref|XP_001965266.1| GF24241 [Drosophila ananassae]
gi|190617876|gb|EDV33400.1| GF24241 [Drosophila ananassae]
Length = 245
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 31/252 (12%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A S+ +G+VP+ VK I +A + N + G++ +VG+V N E ++ +
Sbjct: 15 PAGAASSQKGEGIVPLVVKQIVDAP-----EGNIEMFGMQYAMACVVGIVRNIETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E DT + + YV++ G +S G+K ++ F + P+ +
Sbjct: 70 TYTLEDHSGRIDAHYWLEE-GDTLKAPEVMVNNYVKVYGTTRSQAGQKTLMVFKLLPILD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAP-----TN 204
+EV H +E + N++ + + + S TG + Y A T
Sbjct: 129 PNEVCTHLLEVL-----NARYKAEDYQSK-----------GGATGGAAYSGAGSIADFTA 172
Query: 205 LSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENE 263
S V GL Q + ++ S E G+ EL + I ++ + + + +E
Sbjct: 173 SQSNAIVSGLDPKQQAVFQAIKGNVS---EEGISRKELKAKFSHISNSELNNILDFMISE 229
Query: 264 GLIYSTIDEFHY 275
G IYS+ID H+
Sbjct: 230 GHIYSSIDADHF 241
>gi|429858001|gb|ELA32837.1| putative replication factor-a protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 256
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 57/241 (23%)
Query: 35 RSRDSQGLVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFT 92
++ + L PVT+K I +E ++ G D F I+G +T VT V + + +++
Sbjct: 62 KAYSEESLRPVTIKQIIDAEEAYPGAD---FKIDGATVTQVTFVAQIRQISPQPTNITLK 118
Query: 93 LDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
LDDGTG + K+W + + +VR+ G +KSF GK+ + A +RPVT+F+E
Sbjct: 119 LDDGTGLIEAKKWVDTDKKDDDAAGLDLEGHVRVWGRIKSFNGKRHVGAHFIRPVTDFNE 178
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD 212
V H +E Y
Sbjct: 179 VNYHLLESTYLR------------------------------------------------ 190
Query: 213 GLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTID 271
G Q + +++ P +E GVH+N++S + + +M + L +GLIY+TID
Sbjct: 191 GCSVAAQKMFNFINNAPGGNE---GVHINQISTGAGLSIRDVMGAADELLGQGLIYTTID 247
Query: 272 E 272
+
Sbjct: 248 D 248
>gi|301780752|ref|XP_002925793.1| PREDICTED: replication protein A 30 kDa subunit-like [Ailuropoda
melanoleuca]
gi|281340349|gb|EFB15933.1| hypothetical protein PANDA_015347 [Ailuropoda melanoleuca]
Length = 263
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 134/271 (49%), Gaps = 32/271 (11%)
Query: 16 GGFMPS--QPPQSADYPSSTA-RSR-DSQGLVPVTVKMISEASHSGDDKSNFMINGLEIT 71
GG + S QP Q P++ A RSR Q ++P V + ++ + F I G++++
Sbjct: 16 GGAIGSNDQPFQGGAAPATKAPRSRVRIQDIIPCCVNQLLTSTLVDN---VFKIRGIQVS 72
Query: 72 NVTLVGLVYNKEERASD-VNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVRLIGN 129
++VG++ K ERAS+ + + +DD T + ++W + M + G+YV++IG
Sbjct: 73 QASVVGII-RKAERASNYILYRIDDMTTKPFEVRQWLGRNKAKQGMSLLPVGVYVKVIGI 131
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKS-QVQGFPSSQPQMVDSSLN 188
LK F+ K + ++R + + +E T H +E + H+ K+ QV PS+ +V S ++
Sbjct: 132 LKCFKEVKGLKVLNIRVLEDMNEFTTHILETVNAHMMLDKAHQVASGPSA--PVVPSKID 189
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGL-KDCDQMILDYLQQPSSSERERGVHVNELSEQLK 247
+ G + +D + K+ ++I + QQ S E ++ LSE
Sbjct: 190 EVQKYG------------EYYHLDFIHKEVLRLIHECPQQEGKSVHELQTQLHSLSE--- 234
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+ I ++ L EG IYST+DE H+K A
Sbjct: 235 ---RAIKQALEYLTVEGYIYSTVDEEHFKSA 262
>gi|226291933|gb|EEH47361.1| replication factor-A protein [Paracoccidioides brasiliensis Pb18]
Length = 285
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 28/245 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K +AS + D ++F I+G +++ + VG V + V + LDDGTG
Sbjct: 47 LRPVTIKQTQDASQAHGD-ADFKISGTDVSQIVFVGQVRAISHLTTFVTYKLDDGTGETE 105
Query: 102 CKRW--------ASEVFDTREM-----EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
K W + +TR+ IQ Y ++ G L +F ++ VA +RP+T
Sbjct: 106 VKLWLEKNAVNPTGDDMETRDAAHPSESEIQVNGYAKVWGKLNNFNNRRNFVAHVIRPIT 165
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQM-VDSSLNTSARTGLSGYQTAPTNLSS 207
N +E CH++E HL ++ G +P ++ + +G P + +
Sbjct: 166 NMNEYHCHFLESTAIHLYYTRGPPGGQQGDKPVAGTAPAVGGGGGSTFAGRVLPPLSPLA 225
Query: 208 QFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIY 267
+ + L D P S+E G+HV L+ + + ++ L + GLI+
Sbjct: 226 RKVYETLSDT----------PQSNE---GLHVQNLAALMGLSAGEVFKGGEELLSNGLIF 272
Query: 268 STIDE 272
T+D+
Sbjct: 273 PTVDD 277
>gi|150866145|ref|XP_001385638.2| hypothetical protein PICST_47651 [Scheffersomyces stipitis CBS
6054]
gi|149387401|gb|ABN67609.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 247
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTL 75
GGF P S P R+R S L PVT+K I++A+ D NF +N +E+ ++
Sbjct: 11 GGFTTENAPNSQSEP----RTRTS--LTPVTIKQINDATQPIPD-GNFKVNNVELNMISF 63
Query: 76 VGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDT----REMEAIQDGMYVRLIGNLK 131
VG+V + + S ++ T++DGTG ++W E T E + YV + G LK
Sbjct: 64 VGIVRSVDSLPSAISVTIEDGTGTTNVRKWVDENSGTPAEAEEKYRMYLDKYVYVTGALK 123
Query: 132 SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHL 165
S K I SV PV + ++V H + I+ HL
Sbjct: 124 SMSNKSYIQNASVMPVKDHNQVLSHVLSAIHHHL 157
>gi|413939582|gb|AFW74133.1| hypothetical protein ZEAMMB73_174168 [Zea mays]
Length = 140
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 68/115 (59%), Gaps = 10/115 (8%)
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
++GMY+ +IG+LK Q +K+ AFS+RP+T+F+EVT H+I+C+ H++N++ +
Sbjct: 30 RNGMYIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTE-----LKAG 84
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFG--VDGLKDCD--QMILDYLQQPS 229
P ++SS+ S G S T PT+L S G D D +L++ +P+
Sbjct: 85 SPARINSSMGVSFSNGFSESST-PTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPA 138
>gi|302838187|ref|XP_002950652.1| hypothetical protein VOLCADRAFT_117616 [Volvox carteri f.
nagariensis]
gi|300264201|gb|EFJ48398.1| hypothetical protein VOLCADRAFT_117616 [Volvox carteri f.
nagariensis]
Length = 838
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 59 DKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAI 118
D +M +G +I+ VT+VG V +E + V + DGT + W + D + + +
Sbjct: 142 DDERYMADGHDISTVTVVGKVTAYQEGPTRVILQVYDGTASIEVCSWVDD-MDAQAQKRV 200
Query: 119 --QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK 169
Q G YVR+ GNLK+F+ K+ I AF+V+P+T+ +EVT H+++ I HL +K
Sbjct: 201 DWQVGRYVRVYGNLKTFERKRSITAFAVKPITDHNEVTYHFLQSIMQHLHLTK 253
>gi|156835859|ref|XP_001642188.1| hypothetical protein Kpol_167p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156112634|gb|EDO14330.1| hypothetical protein Kpol_167p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 274
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 38/280 (13%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
+GGGF S + + S L PVTVK I E+ D F+ E+ ++
Sbjct: 12 TGGGFENSDSRGGS--AEGSGNSLRISTLTPVTVKQILESKQLIQDGP-FISYNQELHSI 68
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD------------- 120
+ VG+V N + S++ T++DGTG++ ++W+ + D + D
Sbjct: 69 SFVGVVRNITDHTSNIFLTIEDGTGQIEVRKWSEDASDIATSQENADSGSSDSQIAKQYK 128
Query: 121 -GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFH-LQNSKSQVQGFPSS 178
G YV++ G LK F GKK + ++ VT+F+E+ H++E I H + N K Q
Sbjct: 129 IGTYVKVYGALKEFGGKKNVQYAVIKNVTSFNEIIAHHLEVIKCHAIANGKLQDASRVDE 188
Query: 179 QP-QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERER-- 235
Q D SL + +G T P + IL + ++ S +
Sbjct: 189 QASNNNDQSL--FVKESETGSSTNPLD---------------RILAFCKEQCSGKDANTF 231
Query: 236 GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
V + +S+ L I + + + +L +G IY T D+ ++
Sbjct: 232 AVPIPLISQSLNIDENTVRECCNTLTEQGFIYPTFDDNNF 271
>gi|327304755|ref|XP_003237069.1| hypothetical protein TERG_01792 [Trichophyton rubrum CBS 118892]
gi|326460067|gb|EGD85520.1| hypothetical protein TERG_01792 [Trichophyton rubrum CBS 118892]
Length = 290
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 50/279 (17%)
Query: 32 STARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNF 91
S S +S+ + PVT+K +++A+ + + + F I+ +I V VG V N + A+ + +
Sbjct: 26 SKTYSGESRSVRPVTIKQLNDATQAFPE-APFKIDNADINQVCFVGQVRNVNKLATHITY 84
Query: 92 TLDDGTGRVVCKRW----ASEVFDTREMEAI----QDGM--------------------- 122
LDDGTG K + E FD E+EA+ DG
Sbjct: 85 KLDDGTGETDVKYFIPPEEKEAFD--ELEAMDVMAMDGAGSNAGPAAVTNKSGRPRAYQI 142
Query: 123 ----YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
Y ++ N+K+F ++Q+ A +RP+TN +E H++E HL F
Sbjct: 143 TTNGYAKVFANVKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLH--------FTKG 194
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
P + A TG +NLS + + + + D L +S + G+H
Sbjct: 195 PPPKAGGASGAGAGTGGGAMDMGGSNLS----LPRMSPMARKLYDALS--NSRQTNEGMH 248
Query: 239 VNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKF 277
VN L+ +++ ++ + L +IY T+DE +K
Sbjct: 249 VNVLAPIMQVNVNEVYKAAEELLGLSVIYHTVDEDTWKI 287
>gi|326473024|gb|EGD97033.1| hypothetical protein TESG_04455 [Trichophyton tonsurans CBS 112818]
gi|326477277|gb|EGE01287.1| replication protein A [Trichophyton equinum CBS 127.97]
Length = 289
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 51/279 (18%)
Query: 32 STARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNF 91
S S +S+ + PVT+K +++A+ + + + F I+ +I V VG V N + A+ + +
Sbjct: 26 SKTYSGESRSVRPVTIKQLNDATQAFPE-APFKIDNADINQVCFVGQVRNVNKLATHITY 84
Query: 92 TLDDGTGRVVCKRW----ASEVFDTREMEAI----QDGM--------------------- 122
LDDGTG K + E FD E+EA+ DG
Sbjct: 85 KLDDGTGETDVKYFIPPEEKEAFD--ELEAMDVMAMDGAGSNAGPAAVTNKSGRPRAYQI 142
Query: 123 ----YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
Y ++ N+K+F ++Q+ A +RP+TN +E H++E HL +K G P
Sbjct: 143 TTNGYAKVFANVKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLHFTK----GPPPK 198
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+ + +S + + + + D L +S + G+H
Sbjct: 199 AGGSGAGAGTGGGAMDMG---------ASNLSLPRMSPMARKLYDALS--NSRQTNEGMH 247
Query: 239 VNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKF 277
VN L+ +++ ++ + L +IY T+DE +K
Sbjct: 248 VNVLAPIMQVNVNEVYKAAEELLGLSVIYHTVDEDTWKI 286
>gi|295667655|ref|XP_002794377.1| replication factor-A protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286483|gb|EEH42049.1| replication factor-A protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 285
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 34/248 (13%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K +AS + D ++F I+G E++ + VG V + V + LDDGTG +
Sbjct: 47 LRPVTIKQTQDASQTHGD-TDFKISGTEVSQIVFVGQVRAISHLTTFVTYKLDDGTGEIE 105
Query: 102 CKRWASE--VFDT-REMEA----------IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
K W + V T EMEA IQ Y ++ G L +F ++ VA +RP+T
Sbjct: 106 VKLWLEKNAVNPTGDEMEARDAAHPSESEIQVNGYAKVWGKLNNFNNRRNFVAHVIRPIT 165
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
N +E CH++E HL ++ G P Q + SS
Sbjct: 166 NMNEYHCHFLEATAIHLYYTR----GPPGEQ---------QGDKPVAGAAPAVGGGGSST 212
Query: 209 FG---VDGLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEG 264
F + + + + + L + P S+E G+HV L+ + + ++ L + G
Sbjct: 213 FAGRVLPPMSPLARKVYETLSETPQSNE---GLHVQNLAALMGLSAGEVFKGGEELLSNG 269
Query: 265 LIYSTIDE 272
LI+ T+D+
Sbjct: 270 LIFPTVDD 277
>gi|195148506|ref|XP_002015214.1| GL19582 [Drosophila persimilis]
gi|198474871|ref|XP_001356842.2| GA21663 [Drosophila pseudoobscura pseudoobscura]
gi|194107167|gb|EDW29210.1| GL19582 [Drosophila persimilis]
gi|198138584|gb|EAL33908.2| GA21663 [Drosophila pseudoobscura pseudoobscura]
Length = 237
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 29/247 (11%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ +K I +A + N + G++ LV +V N E ++ +
Sbjct: 15 PAGAASNQKGEGIVPLFIKQIVDAP-----EGNIELFGMQFGMACLVAIVRNVETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E D + + YV++ G +S G+K ++ F + PV +
Sbjct: 70 TYTLEDHSGRIDAHYWLEE-GDALKAPEVMLNNYVKVYGTTRSQAGQKSLMVFKLLPVLD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + + Q +G S+ +S +T+ GL Q A
Sbjct: 129 PNEVCTHLLEALNARYKAEDYQNKGGSSAMVPDFTASQSTAIVNGLDPKQQA-------- 180
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYS 268
Q S+ E G++ EL + I ++ + + + +EG IYS
Sbjct: 181 --------------VFQAIKSNMSEEGINRKELKAKFSHISDSELTNILDFMISEGHIYS 226
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 227 SIDADHF 233
>gi|336470867|gb|EGO59028.1| hypothetical protein NEUTE1DRAFT_78687 [Neurospora tetrasperma FGSC
2508]
gi|350291935|gb|EGZ73130.1| replication protein A, subunit RPA32 [Neurospora tetrasperma FGSC
2509]
Length = 283
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 21/246 (8%)
Query: 42 LVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
L PVT+K + E + G + I+G +T VT+VG V + + + +++ + +DDGTG
Sbjct: 36 LRPVTIKQLLDWEETFPG---AELAIDGHPVTQVTIVGQVRSVKPQPTNITYRIDDGTGA 92
Query: 100 VVCKRWA-SEV----FDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
+ K+W SE AI +VR+ G LKS GKK + A +R + +F+EV
Sbjct: 93 IDVKKWVDSEAQGGEDGGSGAGAIAPDAFVRVWGRLKSLGGKKHVSANFIRQIEDFNEVN 152
Query: 155 CHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTA-------PTNLSS 207
H +E Y HL +K + Q ++ G G A N +
Sbjct: 153 YHLLEATYVHLFFTKGAPGSGGAKQEGGGGDNMFVDQGYGAGGGDVAMGGAGPGGGNSAM 212
Query: 208 QFGVDGLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLI 266
Q + Q++ +++ P +E GV+++ +++ ++ + I ++ L +G+I
Sbjct: 213 QARLATCSRNAQIMCNFINNSPGGTE---GVNLHVIAQGTRMSVRDITNAADELLGQGII 269
Query: 267 YSTIDE 272
Y+T D+
Sbjct: 270 YTTQDD 275
>gi|328770622|gb|EGF80663.1| hypothetical protein BATDEDRAFT_33168 [Batrachochytrium
dendrobatidis JAM81]
Length = 273
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 132/272 (48%), Gaps = 42/272 (15%)
Query: 39 SQGLVPVTVKMISEASHSGD-DKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGT 97
+Q L PVT+K + A+ + S F I+ E+T VTLVG + + ++++ + +DDGT
Sbjct: 13 NQSLRPVTIKQLLAATQTQQTSDSPFTIDSQELTQVTLVGRLNSTTLQSTNCTYVIDDGT 72
Query: 98 GRVV-CKRWAS-EVFDTREMEAIQ--DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
G + CK++ D +++A Q + YV++ G +KSF KK + F +R + + DE+
Sbjct: 73 GLTIECKKFFDYNGADDEKVQADQFPEESYVQVFGQIKSFGSKKTLSLFKMRLINSIDEI 132
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTG--LSGYQTAPTN------- 204
T H I HL +K G + P + T A+ G ++G + T
Sbjct: 133 TYHNTMVIMAHLALTK----GLNDANPNT--AGFGTGAQHGGMMAGIKPQETQSGYLQQQ 186
Query: 205 -------LSSQFGVDGLKDCDQM-------ILDYLQQPSSSERERGVHVNELSEQL--KI 248
+S +G + D M IL++ ++ +S G+ + +L ++ +
Sbjct: 187 YGQYGQQSNSGYG----QSNDSMFTPIQSEILNFAREHQAS--VEGMAIKDLIFRMRGRA 240
Query: 249 PQKKIMDSIASLENEGLIYSTIDEFHYKFARG 280
+ +I + + L NEG IYST+D+ H+K G
Sbjct: 241 SESQIREEVQFLSNEGHIYSTLDDDHFKSTGG 272
>gi|401826582|ref|XP_003887384.1| single-stranded DNA-binding replication protein A medium subunit
[Encephalitozoon hellem ATCC 50504]
gi|395459902|gb|AFM98403.1| single-stranded DNA-binding replication protein A medium subunit
[Encephalitozoon hellem ATCC 50504]
Length = 226
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 47/265 (17%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GG++ S P + + L +T+K I+ + S +++ E+TN+
Sbjct: 4 SDGGYIQSSPKREF---------LGVKTLRALTIKQINNCEFD-EPSSTHLVDSAEVTNI 53
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
++G V + A+ F L+DGTG C W S ++ + + +++ +R+ G+L++F
Sbjct: 54 QIIGWVVSSRISATGSMFVLEDGTGSTDCTFWPSNSYEEEQCKVLEERNLLRISGSLRTF 113
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSART 193
GK+ + + V + + +T H++ CIY HL F + Q Q R
Sbjct: 114 NGKRSVSVSHLSQVEDSNLITYHFLNCIYQHL---------FYTRQLQ----------RE 154
Query: 194 GLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQK 251
+ G DG + D++ D L+ ++ E G+H+N + + L K P+
Sbjct: 155 EVRG--------------DGAR-LDRVQEDILECYRKNQDENGLHINVVIKMLSSKYPEN 199
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
+I ++I L + +YS +D YK
Sbjct: 200 EIRENIDLLLRDCHLYS-VDGLEYK 223
>gi|289743139|gb|ADD20317.1| single-stranded DNA-binding replication protein A medium subunit
RPA 30kD [Glossina morsitans morsitans]
Length = 241
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 34 ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTL 93
A + S+G+ PV +K + +++ + NF + G+ + V L +V N E ++ + ++L
Sbjct: 19 AAEKKSEGIAPVLIKQLLKSA-----EGNFQMFGMNFSMVCLRAIVRNIETSSTKITYSL 73
Query: 94 DDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
+D TG++ W E DT + + Y + G+++S G+K I+ F + P+ + +E+
Sbjct: 74 EDNTGQITAHYWLEEG-DTLKAPDVMLNKYATVYGSVRSQGGQKTIMVFKMLPINDPNEI 132
Query: 154 TCHYIE--CIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGV 211
H +E C + + S G V + + + SS+ +
Sbjct: 133 VTHVLEVLCARYKAEQYASSFSGHNFVGASKVSTGFDMPS--------------SSESRL 178
Query: 212 DGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIAS-LENEGLIYSTI 270
DG K L LQ + + G++ NEL + + ++ ++SI L EG IYS+I
Sbjct: 179 DGKK------LAVLQAIKTHQSPDGINRNELKRKFQQMKESELNSILDFLITEGYIYSSI 232
Query: 271 DEFHY 275
D H+
Sbjct: 233 DADHF 237
>gi|336263699|ref|XP_003346629.1| RFA2 protein [Sordaria macrospora k-hell]
gi|380090523|emb|CCC11820.1| putative RFA2 protein [Sordaria macrospora k-hell]
Length = 284
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 40 QGLVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGT 97
+ L PVT+K + E ++ G D + I+G IT VT+VG V + + + +++ + +DDGT
Sbjct: 34 ESLRPVTIKQLLDWEDTYPGMDPT---IDGHPITQVTIVGQVRSVKPQPTNITYKIDDGT 90
Query: 98 GRVVCKRWA-----SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
G + K+W E + AI +VR+ G LKS GKK + A +R + +F+E
Sbjct: 91 GAIDVKKWVDSEAQGEGENGSGAGAIAPDAFVRVWGRLKSLGGKKHVSANFIRQIEDFNE 150
Query: 153 VTCHYIECIYFHL 165
V H +E Y HL
Sbjct: 151 VNYHLLEATYVHL 163
>gi|328853181|gb|EGG02321.1| hypothetical protein MELLADRAFT_44876 [Melampsora larici-populina
98AG31]
Length = 256
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 9 ASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGL 68
AS + GGGF+ Q QS +++ L PVT+K EA D S + I +
Sbjct: 2 ASYGYDGGGFL--QGSQSNTQSPGGGKAKAESTLRPVTIKQAMEAHFPHSDASAY-IQDV 58
Query: 69 EITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW-ASEVFDTREME---AIQDGMYV 124
E+ +V+ +V S+V F ++DGTG V ++W S +T ++ +Q+ +V
Sbjct: 59 EVAHVSFCAIVREIARHDSNVLFRMEDGTGTVEARKWRESNDGETEGLDPETGVQERDWV 118
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVD 184
R++G + +F K+ + A + +T+F+++ HY++ + L+ + G
Sbjct: 119 RVVGKINNFNSKRYVNASRITKITDFNQINYHYLDAMRVTLEYDRGSSGG---------- 168
Query: 185 SSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSE 244
N A +G + S Q L I+ YL+ S E G+H+ +++
Sbjct: 169 ---NYMAIDHTNGGASNVVKPSDQH--KNLPPKQAKIMSYLE--SQELPEAGMHLEDIAH 221
Query: 245 QLKIPQKKIMDSIASLENEGLIYSTIDE 272
+ + + D+ L G +++T D+
Sbjct: 222 SCAMTLEDVTDATNQLIAAGELFTTSDD 249
>gi|167521223|ref|XP_001744950.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776564|gb|EDQ90183.1| predicted protein [Monosiga brevicollis MX1]
Length = 837
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+GL+PV+V + A+ +G+ ++ +N +I V +VG++ + + RA+ V +T++D TG
Sbjct: 532 EGLMPVSVCQLRSATKNGE---HYRLNNQDIDKVMIVGVIRSVDARATRVTYTVEDHTGA 588
Query: 100 VVCKRWASEVFDTREMEAIQD----GMYVRLIGNLKS-FQGKKQIVAFSVRPVTNFDEVT 154
+ RW+S D E A D YV+++G L+S + Q+ A+++ +TN +++T
Sbjct: 589 ISATRWSSNAGDEEESSAAPDLYRENDYVQVVGQLRSDNENNLQLTAYNISKLTNGNQLT 648
Query: 155 CHYIECIYFHLQNSK 169
H I ++ HL+ +K
Sbjct: 649 HHLISIVHAHLRLTK 663
>gi|225712258|gb|ACO11975.1| Replication protein A 32 kDa subunit [Lepeophtheirus salmonis]
gi|290561278|gb|ADD38041.1| Replication protein A 32 kDa subunit [Lepeophtheirus salmonis]
Length = 257
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 30/270 (11%)
Query: 15 GGGF-MPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
GGGF P Q+ S + +Q LVPV + I + + + + G E+ +
Sbjct: 6 GGGFNTPGGLSQTPGGTSGDKKRTRAQNLVPVAISEILDCT-----EETLSVEGKEVGMI 60
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
+++G V + A+ ++L DGTG++ +W + + + I + R+IG +++
Sbjct: 61 SILGKVESITNEATKSIYSLKDGTGKIDVIQWLDDGQENTN-DNISEDSRCRVIGTVRNS 119
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYF-----HLQNSKSQVQGFPSSQPQMVDSSLN 188
QGKK ++AF + PVT+ +E+ H +E Y L++ ++ G + +V +
Sbjct: 120 QGKKHVMAFKLTPVTSQEEIKGHALEIEYAKLKIRQLKDKENSAIGMHTLSNSLVSGNNF 179
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK- 247
+S G + + F +MI + RE G+ E+ LK
Sbjct: 180 SSGSGGGGNSTFSNPKHEAVF---------KMIAGCM-------REEGISKEEIQTSLKS 223
Query: 248 -IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
I + D++ L EG IYSTIDE H+K
Sbjct: 224 RIGPGDLNDALYFLSGEGHIYSTIDEDHFK 253
>gi|385301665|gb|EIF45839.1| subunit of heterotrimeric replication protein a [Dekkera
bruxellensis AWRI1499]
Length = 280
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 9 ASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGL 68
+ N GGF S D + R +Q + PVT+KMI A+ D + + G+
Sbjct: 25 SDNGAGNGGF------SSQDNSNRQQRQNTTQTITPVTIKMIQSATQPTQDGP-YEVYGM 77
Query: 69 EITNVTLVGLVYNKE-ERASDVNFTLDDGTGRVVCKRWASEVFDTREMEA-IQDGMYVRL 126
+ V+ +G++ + S + L+DGT + ++W ++ D + + + G YVR+
Sbjct: 78 PLYYVSFIGIIREIDTSNTSSTMYKLEDGTEAISVRQWNNDGDDAADDQQQFKSGEYVRV 137
Query: 127 IGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSS 186
++ F KKQ+ S+RP+T+F+E+ H++ + ++ + G PSSQ
Sbjct: 138 SATIREFNSKKQLQTQSIRPITDFNEIPYHFLSAVKVYVGHKNG---GDPSSQGGNNSLF 194
Query: 187 LNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL 246
+ +TG S P Q L + + +++++ S+S E GV ++++
Sbjct: 195 VGDGNQTGDS----QPGRQQQQQNNANLP-LTEKLYNFIKENSNSMVE-GVPTQLMAQEF 248
Query: 247 KIPQKKIMDSIASLENEGLIYSTIDE 272
I ++ + + +L ++G I++T DE
Sbjct: 249 NISVDQVNEHLGTLVDDGRIFATDDE 274
>gi|302506485|ref|XP_003015199.1| possible replication factor-a protein [Arthroderma benhamiae CBS
112371]
gi|291178771|gb|EFE34559.1| possible replication factor-a protein [Arthroderma benhamiae CBS
112371]
Length = 274
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 36 SRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDD 95
S +S+ + PVT+K +++A+ + + + F I+ +I V+ VG V N + A+ + + LDD
Sbjct: 14 SGESRSVRPVTIKQLNDATQAFPE-APFKIDNADINQVSFVGQVRNVNKLATHITYKLDD 72
Query: 96 GTGRVVCKRWA----SEVFDTREMEA-----------------------------IQDGM 122
GTG K + E FD E+EA I
Sbjct: 73 GTGETDVKYFIPPEEKEAFD--ELEAMDVMAMDGGGSNAGPAAVTNKSGRPRAHQITTNG 130
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQM 182
Y ++ N+K+F ++Q+ A +RP+TN +E H++E HL F P
Sbjct: 131 YAKVFANVKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLY--------FTKGPPPK 182
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
+ A TG +NLS + + + + D L +S + G+HVN L
Sbjct: 183 AGGASGVGAGTGGGAMDMGGSNLS----LPRMSPMARKLYDALS--NSKQTNEGMHVNVL 236
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKF 277
+ +++ ++ + L +IY T+DE +K
Sbjct: 237 APIMQVNVNEVYKAAEELLGLSVIYHTVDEDTWKI 271
>gi|194374123|dbj|BAG62374.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 102 CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
++W + E + YV++ G+L+SFQ KK +VAF + P+ + +E T H +E I
Sbjct: 8 VRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVI 67
Query: 162 YFHLQNSKSQVQG----FPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDC 217
H+ SK+ Q P S P M ++ G P N GL
Sbjct: 68 NAHMVLSKANSQPSAGRAPISNPGMSEAG-------NFGGNSFMPAN--------GLTVA 112
Query: 218 DQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L+ ++ + R G++ +L QLK + I ++ L NEG IYST+D+ H+K
Sbjct: 113 QNQVLNLIK---ACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFK 169
>gi|254579595|ref|XP_002495783.1| ZYRO0C02948p [Zygosaccharomyces rouxii]
gi|238938674|emb|CAR26850.1| ZYRO0C02948p [Zygosaccharomyces rouxii]
Length = 259
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 39/253 (15%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K I EA D F+I+ E+ +V+ VG+V N ++ S+V T++DGT ++
Sbjct: 21 LTPVTIKQILEAKQQVQDGP-FVIHNQELHHVSFVGVVRNITDKTSNVELTIEDGTAQID 79
Query: 102 CKRWASEVFDTREMEAIQD----------------GMYVRLIGNLKSFQGKKQIVAFSVR 145
++W+ DT +M+ Q+ G YV++ G LK F GK + ++
Sbjct: 80 VRKWSD---DTSDMKMSQEGNGEKDSSQVAQQYHIGEYVKVYGALKEFSGKSNVQYAVIK 136
Query: 146 PVTNFDEVTCHYIECIY-FHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTN 204
V +F++V H++E I F + N K + QP M + + ++ N
Sbjct: 137 IVDSFNDVIMHHLEVIKCFSIANGKLK-------QPAMEEGAQQQDGKSLFIQEDERAAN 189
Query: 205 LSSQFGVDGLKDCDQMILDYLQQPSSSE--RERGVHVNELSEQLKIPQKKIMDSIASLEN 262
++ + +L Y + + + GV + + + L + + + +L
Sbjct: 190 ---------SENPKERVLAYCRVRCQGQDPNDFGVPIPQFVQALDLDEDTVKQCCDTLTE 240
Query: 263 EGLIYSTIDEFHY 275
+G IY TI + Y
Sbjct: 241 QGFIYPTITDTTY 253
>gi|149755174|ref|XP_001491922.1| PREDICTED: replication protein A 30 kDa subunit-like [Equus
caballus]
Length = 263
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 43/287 (14%)
Query: 3 SSSQFDASNAFSGGGFMPSQPPQSADYPSSTA-RSRD-SQGLVPVTVKMISEASHSGDDK 60
S A+ SGG PSQ +A P++ RSR Q ++P +V + ++ D
Sbjct: 8 SYGSISAAGGASGGNDQPSQGGGTA--PATKLFRSRALIQEIIPCSVNQLLTSTLVDD-- 63
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQ 119
F I G+E++ V++VG++ E + V + +DD T + + ++W S + + +
Sbjct: 64 -VFQIRGVEVSQVSIVGIIRQAEMAPNYVLYKIDDMTTKPIEVRQWVSNEKAKQGVTLLP 122
Query: 120 DGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
G+YV++ G LK G K + ++R + + +E T H +E + H+ K+
Sbjct: 123 VGVYVKVFGTLKCSAGVKCLEVLNIRVLESMNEFTAHVLETGHAHMMLPKA--------- 173
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLS--SQFGVDGLK----DCDQMIL-DYLQQPSSSE 232
YQ AP + + +DG++ DC IL + L+
Sbjct: 174 ------------------YQLAPVQNAPVTPLEMDGVQESGEDCPDYILKEVLRLIRECP 215
Query: 233 RERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
R+ G + +L +L + K I +I L EG +Y T+D H+K A
Sbjct: 216 RKEGKSLQQLQTELCSLSIKTIKQAIDYLTIEGHVYCTVDGEHFKSA 262
>gi|392512693|emb|CAD25396.2| REPLICATION FACTOR A PROTEIN 2 (32KDA SUBUNIT) [Encephalitozoon
cuniculi GB-M1]
Length = 226
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 47/265 (17%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GG++ S P + + L +T+K I + S +++ E+TNV
Sbjct: 4 SEGGYIQSSPKREL---------LGVKTLRALTIKQIGSCDFD-ETSSTHLVDSAEVTNV 53
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
++G V + + A+ F L+DGTG V C W ++ + + +++ +++ G+L++F
Sbjct: 54 QIIGWVVSSKTSATGSMFVLEDGTGSVDCTFWPGNSYEEEQCKVLEEQNLLKVNGSLRTF 113
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSART 193
GK+ + A + V + + VT H++ CIY HL F + Q Q
Sbjct: 114 NGKRSVSASHLSAVEDSNFVTYHFLSCIYQHL---------FYTRQLQ------------ 152
Query: 194 GLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQK 251
+ DG K D++ D L+ ++ E G+H+N + + L K +
Sbjct: 153 ------------REEVKNDGAK-LDRIQEDILECYRRNQDENGLHINVVIKMLSSKYSES 199
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
++ ++I L + +YS +D YK
Sbjct: 200 EVRENIDVLLRDCHLYS-VDGLEYK 223
>gi|344302683|gb|EGW32957.1| hypothetical protein SPAPADRAFT_135817 [Spathaspora passalidarum
NRRL Y-27907]
Length = 262
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 24 PQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKE 83
P SA S+ RS L PVT+K I+E++ D F +N +E+ V+ VG++
Sbjct: 24 PVSAGANSAAVRSS----LTPVTIKQINESTQPVPDGP-FHVNNMELNMVSFVGIIRKIT 78
Query: 84 ERASDVNFTLDDGTGRVVCKRWASEVFDTREME----AIQDGMYVRLIGNLKSFQGKKQI 139
S ++FT++DGTG ++W + +++ E A YV + G+LK+F GK +
Sbjct: 79 AFESAISFTIEDGTGSTEIRKWINSDQTSKDAEEERYAGWLNTYVCVGGSLKAFNGKTSL 138
Query: 140 VAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
+ VT+ ++V H++ I+ HL + QG PSS
Sbjct: 139 QYSGIHQVTDSNQVVYHHLAAIHTHL-----KAQGVPSS 172
>gi|340718537|ref|XP_003397722.1| PREDICTED: replication protein A 32 kDa subunit-like [Bombus
terrestris]
Length = 233
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 47/274 (17%)
Query: 5 SQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFM 64
S D++ + GGF+ QS + R + ++PV ++ +++ +
Sbjct: 3 SNLDSTIVNASGGFLNDSQHQSDGNKKTGGRIKK---IIPVMIQQLTQLN---------- 49
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYV 124
+ LE + +TLVG++++ E+ ++ V + ++D TG + C +W + + I YV
Sbjct: 50 -DNLEGSIITLVGIIHHIEKSSTKVTYEIEDETGHITCFQWLAV---GKSQSIINLNTYV 105
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVD 184
R+ G ++ K I+ + P+T +E+T H +E Y L+ K+ SS M+D
Sbjct: 106 RVFGYIREQTEIKHILILRIWPLTTLNELTNHLLEVTYVALKIQKTSNNKDKSSDVPMLD 165
Query: 185 SSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSER--ERGVHVNEL 242
+L GL+ QT ++ +Q + SE ER N +
Sbjct: 166 DNL------GLTKEQT-------------------IVYKVIQAENDSENGIERKTLKNRV 200
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ + +I+D + S EG IY+T + H+K
Sbjct: 201 PKNMLPLVDEIIDFLTS---EGHIYTTFTDDHFK 231
>gi|19074286|ref|NP_585792.1| REPLICATION FACTOR A PROTEIN 2 (32KDA SUBUNIT) [Encephalitozoon
cuniculi GB-M1]
Length = 274
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 47/265 (17%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GG++ S P + + L +T+K I + S +++ E+TNV
Sbjct: 52 SEGGYIQSSPKREL---------LGVKTLRALTIKQIGSCDFD-ETSSTHLVDSAEVTNV 101
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
++G V + + A+ F L+DGTG V C W ++ + + +++ +++ G+L++F
Sbjct: 102 QIIGWVVSSKTSATGSMFVLEDGTGSVDCTFWPGNSYEEEQCKVLEEQNLLKVNGSLRTF 161
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSART 193
GK+ + A + V + + VT H++ CIY HL F + Q Q
Sbjct: 162 NGKRSVSASHLSAVEDSNFVTYHFLSCIYQHL---------FYTRQLQ------------ 200
Query: 194 GLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQK 251
+ DG K D++ D L+ ++ E G+H+N + + L K +
Sbjct: 201 ------------REEVKNDGAK-LDRIQEDILECYRRNQDENGLHINVVIKMLSSKYSES 247
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
++ ++I L + +YS +D YK
Sbjct: 248 EVRENIDVLLRDCHLYS-VDGLEYK 271
>gi|303389528|ref|XP_003072996.1| replication factor A protein 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302140|gb|ADM11636.1| replication factor A protein 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 226
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 47/265 (17%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GG++ S P + + L +T+K I+ + S MI+ E+TNV
Sbjct: 4 SDGGYIQSSPKREF---------LGIKTLRTLTIKQINNCDFD-EASSTHMIDSAEVTNV 53
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
+VG V + A+ F L+DGT V C W S ++ + +A+++ +++ G+L++F
Sbjct: 54 QIVGWVVSSRTSATGSMFVLEDGTESVDCTFWPSNSYEEEQCKALEEHGLLQVNGSLRTF 113
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSART 193
GK+ + + V + + +T H++ CIY HL F + Q Q
Sbjct: 114 NGKRSVSVSHLAQVEDPNLITYHFLNCIYQHL---------FYTRQLQ------------ 152
Query: 194 GLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQK 251
+ DG K ++ D L+ ++ E G+H+N + + L K P+
Sbjct: 153 ------------REEVKSDGAK-LGRIQEDILECYRKNQDENGLHINVVIKMLSSKYPES 199
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
+I ++I L + +YS +D YK
Sbjct: 200 EIKENIDVLLRDCHLYS-VDGLEYK 223
>gi|449329442|gb|AGE95714.1| replication factor a protein 2 32kDa subunit [Encephalitozoon
cuniculi]
Length = 274
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 47/265 (17%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GG++ S P + + L +T+K I + S +++ E+TNV
Sbjct: 52 SEGGYIQSSPKREL---------LGVKTLRTLTIKQIGSCDFD-ETSSTHLVDSAEVTNV 101
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
++G V + + A+ F L+DGTG V C W ++ + + +++ +++ G+L++F
Sbjct: 102 QIIGWVVSSKTSATGSMFVLEDGTGSVDCTFWPGNSYEEEQCKVLEEQNLLKVNGSLRTF 161
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSART 193
GK+ + A + V + + VT H++ CIY HL F + Q Q
Sbjct: 162 NGKRSVSASHLSAVEDSNFVTYHFLSCIYQHL---------FYTRQLQ------------ 200
Query: 194 GLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQK 251
+ DG K D++ D L+ ++ E G+H+N + + L K +
Sbjct: 201 ------------REEVKNDGAK-LDRIQEDILECYRRNQDENGLHINVVIKMLSSKYSES 247
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
++ ++I L + +YS +D YK
Sbjct: 248 EVRENIDVLLRDCHLYS-VDGLEYK 271
>gi|294885959|ref|XP_002771487.1| Replication protein A 32 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239875191|gb|EER03303.1| Replication protein A 32 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 319
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 32/286 (11%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGD-DKSNFMINGLEITNVT 74
GGF P P S S +R+S GL+PVT M+ A + ++NF +G E +
Sbjct: 41 GGFGPVSP--STGRSKSDPSARESMGLIPVTAAMVINAFKEMEVGEANFKFHGKEAFMIE 98
Query: 75 LVGLVYNKEERASD-VNFTLDDGTGRVVCKRWASEVFDTREMEAIQD---GMYVRLIGNL 130
+VG V + + RA + + +T+DDGTG V R+ + D G YV ++G L
Sbjct: 99 IVGAVIDVQRRADNGMEYTIDDGTGCVRATRFVESSLSAMTDAPVDDIRVGQYVSVVGRL 158
Query: 131 KSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYF------HLQNSKSQVQGFPSSQPQMVD 184
+ F + I A + P++ D + H I + + K+ +Q ++ P +
Sbjct: 159 RRFSSENNITAHHIEPISTPDRIAHHMISVAHAMVMLTDEIPKMKAALQNPGTAPPANQN 218
Query: 185 SSLNTSARTGLSGYQTAPTN------LSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
+ + + YQT N +SS G L Q++L L+ G++
Sbjct: 219 APKQDFGQP--ASYQTQANNRPLMQRMSSAGGNAVLARARQLLLPELRAAFG-----GMN 271
Query: 239 VNELSEQL------KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+Q+ + +I + +L ++G +Y+T D+ H+K +
Sbjct: 272 AAFSRQQVLMRFSTRFHTDEINQLMTALTDDGQLYTTDDDDHFKMS 317
>gi|85105463|ref|XP_961967.1| hypothetical protein NCU07717 [Neurospora crassa OR74A]
gi|28923556|gb|EAA32731.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 284
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 30/251 (11%)
Query: 42 LVPVTVKMI--SEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
L PVT+K + E + G + I+G +T VT+VG V + + + +++ + +DDGTG
Sbjct: 36 LRPVTIKQLLDWEETFPG---AELAIDGHPVTQVTIVGQVRSVKPQPTNITYRIDDGTGA 92
Query: 100 VVCKRWA-SEV----FDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
+ K+W SE I +VR+ G LKS GKK + A +R + +F+EV
Sbjct: 93 IDVKKWVDSEAQGGEDGGSGAGTIAPDAFVRVWGRLKSLGGKKHVSANFIRQIEDFNEVN 152
Query: 155 CHYIECIYFHLQNSKSQVQGFPSSQP-----------QMVDSSLNT-SARTGLSGYQTAP 202
H +E Y HL +K G P S VD + G
Sbjct: 153 YHLLEATYVHLFFTK----GAPGSGGGAKQEGGGGDNMFVDQGYGAGGGDVAMGGAGPGG 208
Query: 203 TNLSSQFGVDGLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLE 261
N + Q + Q++ +++ P +E GV+++ +++ ++ + I ++ L
Sbjct: 209 GNSAMQARLATCSRNAQIMCNFINNSPGGTE---GVNLHVIAQGTRMSVRDITNAADELL 265
Query: 262 NEGLIYSTIDE 272
+G+IY+T D+
Sbjct: 266 GQGIIYTTQDD 276
>gi|383847493|ref|XP_003699387.1| PREDICTED: replication protein A 32 kDa subunit-like [Megachile
rotundata]
Length = 252
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 130/276 (47%), Gaps = 31/276 (11%)
Query: 4 SSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNF 63
SS D+S F GG F + + D ++R +Q VPV ++ + + D
Sbjct: 3 SSNLDSSATFEGG-FANNSTREDQD----ATKTRRAQTTVPVMIRHLLSTGSTED----V 53
Query: 64 MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
I G+ + +LV +V N EE A+ +++ ++D TG +V +W T + + Y
Sbjct: 54 TIWGIPVRMFSLVAIVRNVEETATKISYNIEDETGTIVALKWLEADRKTTD-RTMSVNTY 112
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMV 183
+RL+G L+ K+ ++ + P+ + +E+T H +E Y L K++ +++
Sbjct: 113 IRLVGLLREQNDKRHVLILRMWPLQSLNELTNHILEVTYVAL---KAEAMAKQNNELSHA 169
Query: 184 DSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELS 243
+ ++ S+ + P S+ +G+ + L Y + ++ E G+ +E+
Sbjct: 170 NGNMTMSS--------SKPVEDSADYGM-----TSEQSLIYKIIHAQNDTESGIERSEI- 215
Query: 244 EQLKIPQKKI--MDSIAS-LENEGLIYSTIDEFHYK 276
+ K P+ + +D+I L +EG IY+T + H+K
Sbjct: 216 -KAKAPKTILSRVDTILDFLVSEGHIYTTSTDDHFK 250
>gi|160285780|pdb|2PQA|A Chain A, Crystal Structure Of Full-Length Human Rpa 1432
HETERODIMER
gi|160285782|pdb|2PQA|C Chain C, Crystal Structure Of Full-Length Human Rpa 1432
HETERODIMER
Length = 131
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
+Q +VP T+ + A+ + F I +EI+ VT+VG++ + E+ +++ + +DD T
Sbjct: 2 AQHIVPCTISQLLSATLVDE---VFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 58
Query: 99 RVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
+ ++W + E + YV++ G+L+SFQ KK +VAF + P+ + +E T H
Sbjct: 59 APMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 118
Query: 158 IECIYFHLQNSKS 170
+E I H+ SK+
Sbjct: 119 LEVINAHMVLSKA 131
>gi|351704547|gb|EHB07466.1| Replication protein A 32 kDa subunit [Heterocephalus glaber]
Length = 169
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 19/178 (10%)
Query: 102 CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
++W E + Y++++G+L+SFQ KK +VAF + P+ + +E T H +E +
Sbjct: 3 VRQWVDTDDTGGENTVVPPETYMKVVGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVV 62
Query: 162 YFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLS--SQFGVDGLKDCDQ 219
H+ SK PS+ P +S+ + G+ P N S S +GL
Sbjct: 63 KAHMMLSK------PSTHPSAGRASI---SYPGMG----EPGNFSGNSFMLANGLTMTQN 109
Query: 220 MILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+L+ + S E G++ +L QL+ +P + ++ L NEG IYST+D+ H+K
Sbjct: 110 QVLNLINASPSPE---GLNFQDLRNQLQHMPIASVKQAVDFLSNEGHIYSTVDDDHFK 164
>gi|5822384|pdb|1QUQ|A Chain A, Complex Of Replication Protein A Subunits Rpa14 And Rpa32
gi|5822386|pdb|1QUQ|C Chain C, Complex Of Replication Protein A Subunits Rpa14 And Rpa32
Length = 129
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
+Q +VP T+ + A+ + F I +EI+ VT+VG++ + E+ +++ + +DD T
Sbjct: 1 AQHIVPCTISQLLSATLVDE---VFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTA 57
Query: 99 RVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
+ ++W + E + YV++ G+L+SFQ KK +VAF + P+ + +E T H
Sbjct: 58 APMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHI 117
Query: 158 IECIYFHLQNSK 169
+E I H+ SK
Sbjct: 118 LEVINAHMVLSK 129
>gi|302665672|ref|XP_003024445.1| possible replication factor-a protein [Trichophyton verrucosum HKI
0517]
gi|291188498|gb|EFE43834.1| possible replication factor-a protein [Trichophyton verrucosum HKI
0517]
Length = 284
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 50/275 (18%)
Query: 36 SRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDD 95
S +S+ + PVT+K +++A+ + + + F I+ +I V VG V N + A+ + + LDD
Sbjct: 24 SGESRSVRPVTIKQLNDATQAFPE-APFKIDNADINQVCFVGQVRNVNKLATHITYKLDD 82
Query: 96 GTGRVVCKRWA----SEVFDTREMEAI----QDGM------------------------- 122
GTG K + E FD E+EA+ DG
Sbjct: 83 GTGETDVKYFIPPEEKEAFD--ELEAMDVMAMDGAGSNAGPAAVTNKSGRPRAHQITTNG 140
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQM 182
Y ++ N+K+F ++Q+ A +RP+TN +E H++E HL F P
Sbjct: 141 YAKVFANVKTFNDRRQVNAVLIRPITNINEYHVHFLEATAVHLY--------FTKGPPPK 192
Query: 183 VDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNEL 242
+ T A TG +NLS + + + + + L +S + G+HVN L
Sbjct: 193 AGGASGTGAGTGGGAMDMGGSNLS----LPRISPMARKLYNALS--NSRQTNEGMHVNVL 246
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKF 277
+ +++ ++ + L +IY T+DE +K
Sbjct: 247 APIMQVNVNEVYKAAEELLGLSVIYHTVDEDTWKI 281
>gi|331243151|ref|XP_003334219.1| hypothetical protein PGTG_15756 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 223
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 71/259 (27%)
Query: 22 QPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYN 81
Q Q+ + P T R Q L PVT+K + +A S D S I +++TNV+ G+V +
Sbjct: 24 QGSQNNNTPGGTRRV--EQALRPVTIKQVLDAEASNTD-SAISIQDIDVTNVSFCGVVRD 80
Query: 82 KEERASDVNFTLDDGTGRVVCKRW------ASEVFDTREMEAIQDGMYVRLIGNLKSFQG 135
A++V ++DGTG + ++W SE F+ I+D +VR+IG+ K F
Sbjct: 81 IVRNATNVLLQVEDGTGGIEVRKWIDSSDGESEGFEAETGIQIRD--WVRVIGSPKLFNN 138
Query: 136 KKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGL 195
KK + + +T+F+E I + L ++ ++ F S QP D +N
Sbjct: 139 KKNVAGLRIEKITDFNE--------INYRLLDANKIMEYFASIQPP--DEGIN------- 181
Query: 196 SGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMD 255
++E++ Q + K+++D
Sbjct: 182 -------------------------------------------IHEIARQCNLDVKEVID 198
Query: 256 SIASLENEGLIYSTIDEFH 274
A L +EG +++T+D+ H
Sbjct: 199 ETAQLIHEGELFTTVDDEH 217
>gi|21465963|pdb|1L1O|B Chain B, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
gi|21465966|pdb|1L1O|E Chain E, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
Length = 128
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
Q +VP T+ + A+ + F I +EI+ VT+VG++ + E+ +++ + +DD T
Sbjct: 1 QHIVPCTISQLLSATLVDE---VFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAA 57
Query: 100 VV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYI 158
+ ++W + E + YV++ G+L+SFQ KK +VAF + P+ + +E T H +
Sbjct: 58 PMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHIL 117
Query: 159 ECIYFHLQNSK 169
E I H+ SK
Sbjct: 118 EVINAHMVLSK 128
>gi|195437930|ref|XP_002066892.1| GK24313 [Drosophila willistoni]
gi|194162977|gb|EDW77878.1| GK24313 [Drosophila willistoni]
Length = 239
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 33/255 (12%)
Query: 26 SADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEER 85
+A + A + +G++P+ +K I + N + G+ T+V +V N E
Sbjct: 9 NATQTAGAASEQKGEGILPMLIKQILLLP-----EGNIELFGMHYAMTTVVAIVRNIETS 63
Query: 86 ASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVR 145
++ + +TL+D TGR+ W E D + + YVR+ G +S G+K ++ F
Sbjct: 64 STKITYTLEDHTGRLDAHYWLEE-GDAHKAPDVMLNNYVRVYGTTRSQGGQKTLMVFKAL 122
Query: 146 PVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQ--TAPT 203
PV + +EVT H +E + N++ + + + + G SG+Q T P
Sbjct: 123 PVLDPNEVTTHLLEVL-----NARYKAEAYQE--------------KGGSSGHQNSTMPD 163
Query: 204 NLSSQFG--VDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASL 260
+SQ V+GL Q + Q S+ E G+ EL + I ++ + + +
Sbjct: 164 FSASQSNALVNGLDAKQQAV---FQAIKSNVSEEGIGRKELKGKFSHISDSELNNILEFM 220
Query: 261 ENEGLIYSTIDEFHY 275
+EG IYS+ID H+
Sbjct: 221 ISEGHIYSSIDADHF 235
>gi|350409918|ref|XP_003488887.1| PREDICTED: replication protein A 32 kDa subunit-like [Bombus
impatiens]
Length = 233
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 47/274 (17%)
Query: 5 SQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFM 64
S D++ + GGF+ QS + R + ++PV ++ +++ +
Sbjct: 3 SNLDSTIVSASGGFLNDSQDQSDGNKKTGKRIKK---IIPVMIQQLTQLN---------- 49
Query: 65 INGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYV 124
+ LE + +TLVG++++ E+ ++ V + ++D TG + C +W + + I YV
Sbjct: 50 -DNLEGSIITLVGIIHHIEKSSTKVTYEIEDETGHITCFQWLAV---GKSESIINLNTYV 105
Query: 125 RLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVD 184
R+ G ++ K I+ + P+T +E+T H +E Y L+ K+ S M+D
Sbjct: 106 RVFGYIREQTEIKHILILKIWPLTTLNELTNHLLEVTYVTLKIQKTSNNEDKGSDVPMLD 165
Query: 185 SSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSER--ERGVHVNEL 242
+L GL+ QT ++ +Q + SE ER N +
Sbjct: 166 DNL------GLTKEQT-------------------IVYRVIQAENDSENGIERKTLKNRV 200
Query: 243 SEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ + +I+D + S EG IY+T + H+K
Sbjct: 201 PKNMLPTVDEIIDFLTS---EGHIYTTFTDDHFK 231
>gi|116811975|emb|CAL26154.1| CG9273 [Drosophila melanogaster]
Length = 246
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 22/248 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PTGAASNQKGEGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNVETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E D + + YV++ G +S G K ++ F + PV +
Sbjct: 70 TYTLEDHSGRIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + N++ + + + S + ++ +R+ A S
Sbjct: 129 PNEVCTHLLEVL-----NARYRAEDYQSKGGAGAGAWASSGSRS------IADFTASQSS 177
Query: 210 G-VDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIY 267
G V GL+ Q + +Q S+ E G+ EL + I ++ + + + +EG IY
Sbjct: 178 GIVSGLEPKQQAVFQAIQ---SNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIY 234
Query: 268 STIDEFHY 275
S+ID H+
Sbjct: 235 SSIDADHF 242
>gi|396081506|gb|AFN83122.1| replication factor A protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 226
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 47/265 (17%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GG++ S P + + L +T+K I+ + S +I+ E+TNV
Sbjct: 4 SDGGYIQSSPKREF---------LGIKTLRALTIKQINNCEFD-EISSAHLIDSAEVTNV 53
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
++G V + A+ F L+DGTG V C W S ++ + + +++ ++ G+L++F
Sbjct: 54 QIIGWVVSSRISATGSMFVLEDGTGSVDCTFWPSNSYEEEQCKILEEKNLFKVNGSLRTF 113
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSART 193
GK+ + + V + + +T H++ CI+ HL F + Q Q
Sbjct: 114 NGKRSVSVSHLSQVEDSNFITYHFLNCIHQHL---------FYTRQLQ------------ 152
Query: 194 GLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQK 251
+ DG + D++ D L+ ++ E G+H+N + + L K P+
Sbjct: 153 ------------REEVRSDGAR-LDRIQEDILECYRKNQDENGLHINVVIKMLSSKYPEN 199
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
+I ++I L + +YS +D YK
Sbjct: 200 EIRENIDVLLRDCHLYS-VDGLEYK 223
>gi|300175582|emb|CBK20893.2| unnamed protein product [Blastocystis hominis]
Length = 225
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 13 FSGGGFMPSQPPQSADY-PSSTARSRDSQGLVPVTVKMISE-ASHSGDDKSNFMINGLEI 70
+ GG + P+ + P S + S+ ++P+ V MI SHS + NF I
Sbjct: 2 YGGGAYNPNPTSYTGTGGPISPSHPAASRPIIPIVVSMIGRLISHS---EGNFQYFDSSI 58
Query: 71 TNVTLVGLVYNKEERASD-VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGN 129
+ +++ G++ N ++ +S+ +FT+ DGTG + + D ++ DG YVR+IG
Sbjct: 59 STISVCGIICNIKQGSSERKSFTIHDGTGAIQATFYVQN--DNQQFAT--DG-YVRVIGT 113
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHL 165
L+ FQ K +I + P+++F+E+T HY+ CI +L
Sbjct: 114 LRQFQDKVEISGYHCDPISSFNEITIHYLSCIQSYL 149
>gi|270047786|pdb|3KDF|D Chain D, X-Ray Crystal Structure Of The Human Replication Protein A
C From Wheat Germ Cell Free Expression
gi|270047788|pdb|3KDF|B Chain B, X-Ray Crystal Structure Of The Human Replication Protein A
C From Wheat Germ Cell Free Expression
Length = 132
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
+Q +VP T+ + A+ + F I +EI+ VT+VG++ + E+ +++ + +DD T
Sbjct: 3 AQHIVPCTISQLLSATLVDE---VFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDXTA 59
Query: 99 RVV-CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
++W + E + YV++ G+L+SFQ KK +VAF + P+ + +E T H
Sbjct: 60 APXDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVAFKIXPLEDXNEFTTHI 119
Query: 158 IECIYFHLQNSKS 170
+E I H SK+
Sbjct: 120 LEVINAHXVLSKA 132
>gi|403175388|ref|XP_003889007.1| hypothetical protein PGTG_22244 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171580|gb|EHS64408.1| hypothetical protein PGTG_22244 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 169
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 18 FMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVG 77
FM Q Q+ + P T R Q L PVT+K + +A S D S I +++TNV+ G
Sbjct: 22 FM--QGSQNNNTPGGTRRV--EQALRPVTIKQVLDAEASNTD-SAISIQDIDVTNVSFCG 76
Query: 78 LVYNKEERASDVNFTLDDGTGRVVCKRWA------SEVFDTREMEAIQDGMYVRLIGNLK 131
+V + A++V ++DGTG + ++W SE F+ I+D +VR+IG+ K
Sbjct: 77 VVRDIVRNATNVLLQVEDGTGGIEVRKWIDSSDGESEGFEAETGIQIRD--WVRVIGSPK 134
Query: 132 SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHL 165
F KK + + +T+F+E+ ++ + L
Sbjct: 135 LFNNKKNVAGLRIEKITDFNEINYRLLDAVRVTL 168
>gi|332375126|gb|AEE62704.1| unknown [Dendroctonus ponderosae]
Length = 265
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 47/292 (16%)
Query: 1 MFSSSQFDASNAFSGGGFM--PSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGD 58
M+++ N + GGF+ + S P S R Q +VP+ V+M+ + SGD
Sbjct: 1 MWNTGYNSGFNDSTAGGFLNNTTNDSPSVKQPKSVRRL---QSVVPLVVRMLRD---SGD 54
Query: 59 DKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW--ASEVFDTREME 116
+ F + G+ + V+LVG++ + +++ ++T+ D TG + W + +M
Sbjct: 55 E---FKLFGMPVQIVSLVGILLEFDVQSTKASYTIQDHTGSIKAIFWLEGENCDEACKMP 111
Query: 117 AIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQN---SKSQVQ 173
A+++G YV++ G +++ +G+K ++ + P+ + + + H +E I LQ SK+ Q
Sbjct: 112 AVKEGGYVKVYGTIRNQEGEKALMVLKMFPIDDCNIILTHLLEVIDTRLQAEVMSKNTAQ 171
Query: 174 GFPSSQP--------QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYL 225
+ P M D ++ + + LSG Q + +L
Sbjct: 172 QIKQNNPGATLANSMTMFDENVVENGQHNLSGIQLR-------------------VYKFL 212
Query: 226 QQPSSSERERGVHVNELSEQLKIPQKK-IMDSIASLENEGLIYSTIDEFHYK 276
Q S + + G + + Q+K +++ L NEG YSTID H+K
Sbjct: 213 Q---SDQSQAGPDIASILGHFPPNQRKDANEALDFLVNEGHAYSTIDNEHFK 261
>gi|326932869|ref|XP_003212534.1| PREDICTED: replication protein A 32 kDa subunit-like isoform 2
[Meleagris gallopavo]
Length = 229
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
Query: 118 IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPS 177
+ G YV++ G+L+SFQ KK +VAF + P+ N +E T H +E + H+ K+ + S
Sbjct: 80 VPPGTYVKVAGHLRSFQNKKSLVAFKIMPLENMNEFTTHILETVNAHMILRKNLM--LAS 137
Query: 178 SQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGV 237
PQ S ++ + + Y V+GL +L+ ++ S E G+
Sbjct: 138 RAPQ----SFTSAGMSDVGSYG------GGSLPVNGLTAHQSQVLNLIKNCHSPE---GM 184
Query: 238 HVNELSEQLK---IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ EL QL IP I ++ L +EG IYST+D+ HYK
Sbjct: 185 SLQELKLQLHNVSIP--TIKQAVEFLSSEGHIYSTVDDDHYK 224
>gi|380013149|ref|XP_003690630.1| PREDICTED: replication protein A 32 kDa subunit-like [Apis florea]
Length = 247
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 7/128 (5%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
Q L+PVT+K++ S S +D + + G++ T VGL+ N EE A+ +++ ++D TG
Sbjct: 33 QTLIPVTIKLLHSIS-SIEDPTFW---GIKARMFTFVGLIRNVEETATKISYDIEDDTGT 88
Query: 100 VVCKRWASEVFDTREMEAIQD-GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYI 158
+ +W + +E + + + YVR++G L+ K+ I+ + P+ N +E+T H +
Sbjct: 89 ITALKWLEA--NKQETDRVAEVNTYVRIVGMLREQNDKRHILILRLLPLQNLNELTNHIL 146
Query: 159 ECIYFHLQ 166
E IY L+
Sbjct: 147 EVIYASLK 154
>gi|19921606|ref|NP_610077.1| replication protein A2, isoform A [Drosophila melanogaster]
gi|442628687|ref|NP_001260652.1| replication protein A2, isoform B [Drosophila melanogaster]
gi|17861854|gb|AAL39404.1| GM04951p [Drosophila melanogaster]
gi|22946959|gb|AAF53948.2| replication protein A2, isoform A [Drosophila melanogaster]
gi|116811973|emb|CAL26153.1| CG9273 [Drosophila melanogaster]
gi|116811977|emb|CAL26155.1| CG9273 [Drosophila melanogaster]
gi|116811979|emb|CAL26156.1| CG9273 [Drosophila melanogaster]
gi|116811981|emb|CAL26157.1| CG9273 [Drosophila melanogaster]
gi|116811983|emb|CAL26158.1| CG9273 [Drosophila melanogaster]
gi|116811985|emb|CAL26159.1| CG9273 [Drosophila melanogaster]
gi|116811989|emb|CAL26161.1| CG9273 [Drosophila melanogaster]
gi|116811991|emb|CAL26162.1| CG9273 [Drosophila melanogaster]
gi|116811993|emb|CAL26163.1| CG9273 [Drosophila melanogaster]
gi|220942772|gb|ACL83929.1| RPA2-PA [synthetic construct]
gi|223967015|emb|CAR93244.1| CG9273-PA [Drosophila melanogaster]
gi|223967017|emb|CAR93245.1| CG9273-PA [Drosophila melanogaster]
gi|223967019|emb|CAR93246.1| CG9273-PA [Drosophila melanogaster]
gi|223967021|emb|CAR93247.1| CG9273-PA [Drosophila melanogaster]
gi|223967023|emb|CAR93248.1| CG9273-PA [Drosophila melanogaster]
gi|223967025|emb|CAR93249.1| CG9273-PA [Drosophila melanogaster]
gi|223967027|emb|CAR93250.1| CG9273-PA [Drosophila melanogaster]
gi|223967029|emb|CAR93251.1| CG9273-PA [Drosophila melanogaster]
gi|223967033|emb|CAR93253.1| CG9273-PA [Drosophila melanogaster]
gi|223967035|emb|CAR93254.1| CG9273-PA [Drosophila melanogaster]
gi|223967037|emb|CAR93255.1| CG9273-PA [Drosophila melanogaster]
gi|440214018|gb|AGB93187.1| replication protein A2, isoform B [Drosophila melanogaster]
Length = 246
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 20/247 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PTGAASNQKGEGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNVETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E D + + YV++ G +S G K ++ F + PV +
Sbjct: 70 TYTLEDHSGRIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + N++ + + + S+ + +S ++ + T S
Sbjct: 129 PNEVCTHLLEVL-----NARYRAEDY-QSKGGAGAGAGASSGSGSIADF----TASQSSA 178
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYS 268
V GL+ Q + Q S+ E G+ EL + I ++ + + + +EG IYS
Sbjct: 179 IVSGLEPKQQAV---FQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYS 235
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 236 SIDADHF 242
>gi|195476000|ref|XP_002090270.1| GE13014 [Drosophila yakuba]
gi|194176371|gb|EDW89982.1| GE13014 [Drosophila yakuba]
Length = 244
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 22/247 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
PS A S+ +G+ P+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PSGAASSQKGEGIAPLVVKQIVDAP-----EGNIEMFGMQYAMACVVAIVRNIETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+ L+D +GR+ W E D + + YV++ G +S G K ++ F + PV +
Sbjct: 70 TYALEDHSGRIDAHYWLEE-GDALKAPEVMINNYVKVYGTTRSQGGSKTLMIFKLLPVLD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + N++ + + + S +S + + + Q++
Sbjct: 129 PNEVCTHLLEVL-----NARYRAEDYQSKGGAGAGASSGSGSIADFTASQSSAI------ 177
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYS 268
V GL+ Q + ++ S E G+ EL + I ++ + + + +EG IYS
Sbjct: 178 -VSGLEPKQQAVFQAIKINVS---EEGISRKELKAKFSHISDSELTNILDFMISEGHIYS 233
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 234 SIDADHF 240
>gi|116811971|emb|CAL26152.1| CG9273 [Drosophila melanogaster]
Length = 246
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 20/247 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PTGAASNQKGEGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNVETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E D + + YV++ G +S G K ++ F + PV +
Sbjct: 70 TYTLEDHSGRIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + N++ + + + S+ + +S ++ + T S
Sbjct: 129 PNEVCTHLLEVL-----NARYRAEDY-QSKGGAGAGAGASSGSGSIADF----TASQSSA 178
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYS 268
V GL+ Q + Q S+ E G+ EL + I ++ + + + +EG IYS
Sbjct: 179 IVSGLEPKQQAV---FQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYS 235
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 236 SIDADHF 242
>gi|225709990|gb|ACO10841.1| Replication protein A 32 kDa subunit [Caligus rogercresseyi]
Length = 260
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R+R +Q LVPVT+ + E + + + I GLE+ V L+G V + A+ ++L
Sbjct: 26 RTR-AQNLVPVTISSVLECT-----EESLSIEGLEVGMVCLLGKVVSISNEATKSVYSLK 79
Query: 95 DGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
D T ++ +W E D + + +D M+ R+IG +++ GKK I+AF + PV E+
Sbjct: 80 DKTAQIDVIQWLDEGQDASKDDVCED-MHARVIGTVRNSGGKKHIMAFKISPVEAMSEIK 138
Query: 155 CHYIECIYFHLQ 166
H +E Y L+
Sbjct: 139 GHALEVEYARLK 150
>gi|194878552|ref|XP_001974086.1| GG21537 [Drosophila erecta]
gi|190657273|gb|EDV54486.1| GG21537 [Drosophila erecta]
Length = 246
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 20/247 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PAGAASNQKGEGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNIETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E D + + YV++ G +S G K ++ F + PV +
Sbjct: 70 TYTLEDHSGRIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + N++ + + + S+ + +S ++ + T S
Sbjct: 129 PNEVCTHLLEAL-----NARYRAEDY-QSKGGAGGGAGASSGSGPIADF----TASQSSA 178
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYS 268
V GL+ Q + Q S+ E G+ EL + I ++ + + + +EG IYS
Sbjct: 179 IVSGLEPKQQAV---FQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYS 235
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 236 SIDADHF 242
>gi|116196082|ref|XP_001223853.1| hypothetical protein CHGG_04639 [Chaetomium globosum CBS 148.51]
gi|88180552|gb|EAQ88020.1| hypothetical protein CHGG_04639 [Chaetomium globosum CBS 148.51]
Length = 267
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 35 RSRDSQGLVPVTVKMISEAS--HSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFT 92
R+ L PVT+K + + + G S ++GL T VTLVG V + ++ +
Sbjct: 29 RNYADDTLRPVTIKQLVDCKEPYPG---SELAVDGLPTTQVTLVGQVRSSTVQSIYTTYR 85
Query: 93 LDDGTGRVVCKRWA-SEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFD 151
+DDGTG + K++ S+ DT A YVR+ G L S+ GK+ + A ++R + +F+
Sbjct: 86 IDDGTGLIDVKKFVDSDRPDTAVTFAPD--TYVRVFGRLMSYNGKRTVTAHNIRAIDDFN 143
Query: 152 EVTCHYIECIYFHLQNSK 169
EV H +E Y HL +K
Sbjct: 144 EVNYHLLEATYVHLALTK 161
>gi|328781494|ref|XP_001121269.2| PREDICTED: replication protein A 32 kDa subunit [Apis mellifera]
Length = 246
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
Q L+PVT+K++ HS + G++ T VGL+ N EE A+ +++ ++D TG
Sbjct: 33 QTLIPVTIKLL----HSISPIEDPTFWGIKARMFTFVGLIRNVEETATKISYDIEDDTGT 88
Query: 100 VVCKRWASEVFDTREMEAIQD-GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYI 158
+ +W + +E + + + YVR++G L+ K+ I+ + P+ N +E+T H +
Sbjct: 89 ITALKWLEA--NKQETDRVAEVNTYVRIVGMLREQNDKRHILILRLLPLQNLNELTNHIL 146
Query: 159 ECIYFHLQ 166
E IY L+
Sbjct: 147 EVIYASLK 154
>gi|225711774|gb|ACO11733.1| Replication protein A 32 kDa subunit [Caligus rogercresseyi]
Length = 260
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R+R +Q LVPVT+ + E + + + I GLE+ V L+G V + A+ ++L
Sbjct: 26 RTR-AQNLVPVTISSVLECT-----EESLSIEGLEVGMVCLLGKVVSISNEATKSVYSLK 79
Query: 95 DGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
D T ++ +W E D + + +D M+ R+IG +++ GKK I+AF + PV E+
Sbjct: 80 DKTAQIDVIQWLDEGQDASKDDVCED-MHARVIGTVRNSGGKKHIMAFKISPVEAMSEIK 138
Query: 155 CHYIECIYFHLQ 166
H +E Y L+
Sbjct: 139 GHTLEVEYARLK 150
>gi|170040961|ref|XP_001848249.1| insect replication protein a [Culex quinquefasciatus]
gi|167864549|gb|EDS27932.1| insect replication protein a [Culex quinquefasciatus]
Length = 248
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 13/152 (8%)
Query: 10 SNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLE 69
+++F GGGF S + D ++G++P+ V+ I E+S +G + G +
Sbjct: 2 NDSFGGGGFNASSAGGAKD-------ENKAEGVLPLMVRHILESSEAG-----IQLFGFQ 49
Query: 70 ITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGN 129
VT VG+V + + ++ V + ++D TG+V W E D + + YVR++G+
Sbjct: 50 YAMVTFVGIVRHIDHSSTKVTYRVEDHTGQVDAHLWLEE-GDNMNIPGVLINTYVRIVGS 108
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
++S G K ++ F + + + +EVT H +E +
Sbjct: 109 VRSQGGSKAVMIFKIAQIDSPNEVTTHLLEVL 140
>gi|149240019|ref|XP_001525885.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450008|gb|EDK44264.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 262
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 37/269 (13%)
Query: 12 AFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEIT 71
+S GGF QS +++ L PVT+K I EA+ + D +F+++ + ++
Sbjct: 23 GYSQGGFSNENGSQSGG-----TKTQGRSSLTPVTIKQILEATQATPD-GDFLVHNVTLS 76
Query: 72 NVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASE-----VFDTREMEAIQDGMYVRL 126
++ VG+V + + V T++DGTG + ++W E +T + A ++ YV +
Sbjct: 77 MISFVGVVRKVDGQGMSVIITVEDGTGSIDVRKWVDESTTSLAVETEKYSAFKN-KYVFV 135
Query: 127 IGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSS 186
G+LK KK I ++ + + +++ H++ I HL++ QG P S D
Sbjct: 136 GGSLKLHMNKKSIQNAAIALIEDSNQIIYHHLSAIDHHLKS-----QGLPKSSGANTDGD 190
Query: 187 LNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL 246
L D + +L ++ + S + ++ GV +N ++E+L
Sbjct: 191 LFVKDE-------------------DSNESLMNRVLKFITEESKTMQD-GVPINYIAEKL 230
Query: 247 KIPQKKIMDSIASLENEGLIYSTIDEFHY 275
I + + + L G IY ++ Y
Sbjct: 231 GISKDEGLRQCNELIENGRIYLGFNDGGY 259
>gi|432115744|gb|ELK36929.1| Replication protein A 30 kDa subunit [Myotis davidii]
Length = 262
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 26/274 (9%)
Query: 7 FDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN 66
F A++ SG PSQ + + +R+R + ++P V + AS D F +
Sbjct: 12 FFAASGASGSNEGPSQGGMAPFLKAPRSRAR-IEPIIPCCVNQLLTASLVDD---VFKVR 67
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDGMYVR 125
G+ ++ V++VG++ E + + + +DD T + + + W +E+ G+Y +
Sbjct: 68 GIVVSQVSIVGIIRKAERAPNYILYKIDDMTTKPIDARHWLGRNKAKQELAPCPVGVYAK 127
Query: 126 LIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDS 185
++G L+ + + +R + + +E T H +E + H+ +K Q + + S P S
Sbjct: 128 VLGILRGSAEVRILEVLQIRVLEDMNEFTAHILETVNTHMMLAKGQEEAYGQSAP----S 183
Query: 186 SLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQ 245
+ +A+ P + Q + D L+ + G V EL +
Sbjct: 184 APPEAAQA------PEPCEVRPQV----------VQADVLRLIRECPHQEGKSVGELHAE 227
Query: 246 L-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
L + K I D++ L EG IY T+D H+K A
Sbjct: 228 LGSLSIKAIKDALEYLMVEGHIYPTVDGQHFKSA 261
>gi|195580553|ref|XP_002080100.1| GD21666 [Drosophila simulans]
gi|116811995|emb|CAL26164.1| CG9273 [Drosophila simulans]
gi|194192109|gb|EDX05685.1| GD21666 [Drosophila simulans]
Length = 246
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%), Gaps = 20/247 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PAGAASNQKGEGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNVETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E D + + YV++ G +S G K ++ F + PV +
Sbjct: 70 TYTLEDHSGRIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + N++ + + + S+ + +S ++ + T S
Sbjct: 129 PNEVCTHLLEVL-----NARYRAEDY-QSKGGAGAGAGASSGSGSIADF----TASQSSA 178
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYS 268
V GL Q + Q S+ E G+ EL + I ++ + + + +EG IYS
Sbjct: 179 IVSGLDPKQQAV---FQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYS 235
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 236 SIDADHF 242
>gi|225710782|gb|ACO11237.1| Replication protein A 32 kDa subunit [Caligus rogercresseyi]
Length = 260
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R+R +Q LVPVT+ + E + + + I GLE+ V L+G V + A+ ++L
Sbjct: 26 RTR-AQNLVPVTISSVLECT-----EESLSIEGLEVGMVCLLGKVVSISNEATKSVYSLK 79
Query: 95 DGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
D T ++ +W E D + +D M+ R+IG +++ GKK I+AF + PV E+
Sbjct: 80 DKTAQIDVIQWLDEGQDASRDDVCED-MHARVIGTVRNSGGKKHIMAFKISPVEAMSEIK 138
Query: 155 CHYIECIYFHLQ 166
H +E Y L+
Sbjct: 139 GHTLEVEYARLK 150
>gi|351697889|gb|EHB00808.1| Replication protein A 32 kDa subunit [Heterocephalus glaber]
Length = 396
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 68/277 (24%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
S GGF P S S AR+ Q +VP T+ + A+ + F I +EI+ V
Sbjct: 21 SPGGF--GSPTASQAEKKSRARA---QYIVPCTISQLLSATLVDE---VFKIGNVEISQV 72
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWAS------------------EVFDTRE 114
T+VG++ E+ +++ + +DD T + ++W F T
Sbjct: 73 TVVGIIRQAEKAPTNIVYKIDDMTAAPMDVRQWVDTDNKKSLVAFKIMPLEDMNEFTTHI 132
Query: 115 MEAIQDGM---------------------YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
+E + M YV++ G+L+SFQ KK +VAF + P+ + +E
Sbjct: 133 LEVVNAHMMLSKPSTQDTGGENTVVPPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEF 192
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR---TGLSGYQTAPTNLSSQFG 210
T H +E + H+ SK PS+QP +S++ SG P N
Sbjct: 193 TTHILEVVNAHMMLSK------PSTQPSAGRASISNPGMGEPGNFSGNSFMPAN------ 240
Query: 211 VDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK 247
GL +L+ ++ + R G++ +L QL+
Sbjct: 241 --GLTMTQNQVLNLIK---ACPRPEGLNFQDLRSQLQ 272
>gi|193890957|gb|ACF28632.1| replication protein [Amphidinium carterae]
Length = 264
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 25 QSADYPSSTARSRDSQGLVPVTVKMISEASHSG-DDKSNFMINGLEITNVTLVGLVYNKE 83
Q+A P R + + +P T+++ EA+ + N ++G E+ + LVG+V +
Sbjct: 2 QAAAKP---VRQEEVETCMPATIRIAQEAAMGPLSEAKNVYVHGKEVGVLLLVGMVEDIA 58
Query: 84 ERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFS 143
++ S + F+++DGTGR+ K + + + E+ ++Q G Y++ +G++++ G + A
Sbjct: 59 KQGSSMEFSVNDGTGRMKVKYYVTSELPS-ELASLQVGDYIKAVGSVRATPG-VHLSAVV 116
Query: 144 VRPVTNFDEVTCHYIECIYFHLQ 166
++ V ++DEV+ H IE Y L+
Sbjct: 117 LKKVASYDEVSYHLIEVAYAALK 139
>gi|302310678|ref|XP_002999398.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199428225|emb|CAR56736.1| KLLA0E07371p [Kluyveromyces lactis]
Length = 227
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREM------- 115
++I G E+ +V+ VG++ N + S+V T++DGTG++ ++W ++ D
Sbjct: 13 YVIMGQELHHVSFVGVIRNVADNTSNVTLTVEDGTGQIEFRKWTNDSNDMSHASQEDQNG 72
Query: 116 ----EAIQD---GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNS 168
+ QD G Y+++ +L+ F GK + V+ + +F+E+ H++E I
Sbjct: 73 DYNSQVAQDYSVGKYIKVYASLREFSGKMNVQYAVVKHIDSFNEILAHHLEVI------- 125
Query: 169 KSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQP 228
+ F + + +L+ + ++G T +L Q + K + +LD+++
Sbjct: 126 ----KAFA-----VANGNLSVDSTVAVNGANTETNSLFVQDN-EPPKSATEKVLDFIRAQ 175
Query: 229 SSSERER--GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ + V +S+ L + + + +L +G IY T DEF +
Sbjct: 176 CAGKDSNSFSVQTKLISQSLNMIEDDVRMYCQTLTEQGYIYPTFDEFTF 224
>gi|195351987|ref|XP_002042497.1| GM23291 [Drosophila sechellia]
gi|194124366|gb|EDW46409.1| GM23291 [Drosophila sechellia]
Length = 246
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 20/247 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PAGAASNQKGEGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNVETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E D + + YV++ G +S G K ++ F + PV +
Sbjct: 70 TYTLEDHSGRIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + N++ + + + S+ + +S ++ + T S
Sbjct: 129 PNEVCTHLLEVL-----NARYRAEDY-QSKGGAGAGAGASSGSGSIADF----TASQSSA 178
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYS 268
V GL Q + Q S+ E G+ +L + I ++ + + + +EG IYS
Sbjct: 179 IVSGLDPKQQAV---FQAIKSNVSEEGISRKQLKAKFSHISDSELTNILDFMISEGHIYS 235
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 236 SIDADHF 242
>gi|339259190|ref|XP_003369781.1| replication protein A subunit [Trichinella spiralis]
gi|316966007|gb|EFV50643.1| replication protein A subunit [Trichinella spiralis]
Length = 279
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 126/291 (43%), Gaps = 45/291 (15%)
Query: 12 AFSGG--GFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLE 69
+F GG GF+ SQ S D P R+ +VPVT MI+ S G+D N I E
Sbjct: 4 SFDGGVGGFLASQ---SGDRPEIRKSQRE---IVPVTCSMINNMS-PGED--NLRIGTYE 54
Query: 70 ITNVTLVGLVYNKEERASDVNFTLDDGTGR-VVCKRWAS--------------------- 107
++ V +V ++ + + T+DD T + ++W
Sbjct: 55 VSQVCIVAVIRDVSYGDIYTDITIDDMTSSPITARQWVKVHSIYVVKVVTIQYLAVICIV 114
Query: 108 -EVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQ 166
E +T EM+ + + V++ GN+ +FQ KK + F + V + +++T H +E + L
Sbjct: 115 KENKNTEEMQKKCNSL-VKVFGNITTFQKKKILTVFGMMTVADLNDLTVHLLEVLRAKLS 173
Query: 167 NSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ 226
K + + D++ S G S Q A ++ G+ GL+ I +L
Sbjct: 174 FEKDCLNTDRKESNRPKDATPFMSY--GTSEMQ-ADNKMTYDNGLSGLR---AEIYRFLS 227
Query: 227 QPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ E G VN++ + K+ D I L EG IYSTIDE H+K
Sbjct: 228 NNDTIE---GCSVNDIKSHFAHVTMSKLRDEIEFLCCEGHIYSTIDEDHFK 275
>gi|19528549|gb|AAL90389.1| RH07841p [Drosophila melanogaster]
Length = 246
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 20/247 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PTGAASNQKGEGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNVETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +GR+ W E D + + YV++ G +S G K ++ F + P+ +
Sbjct: 70 TYTLEDHSGRIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPILD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + + Q S+ + +S ++ + T S
Sbjct: 129 PNEVCTHLLEVLNARYRAEDCQ------SKGGAGAGAGASSGSGSIADF----TASQSSA 178
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYS 268
V GL+ Q + Q S+ E G+ EL + I ++ + + + +EG IYS
Sbjct: 179 IVSGLEPKQQAV---FQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYS 235
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 236 SIDADHF 242
>gi|116811987|emb|CAL26160.1| CG9273 [Drosophila melanogaster]
Length = 246
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 20/247 (8%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+ A ++ +G+VP+ VK I +A + N + G++ +V +V N E ++ +
Sbjct: 15 PTGAASNQKGEGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNVETSSTKI 69
Query: 90 NFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTN 149
+TL+D +G + W E D + + YV++ G +S G K ++ F + PV +
Sbjct: 70 TYTLEDHSGSIDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLD 128
Query: 150 FDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQF 209
+EV H +E + N++ + + + S+ + +S ++ + T S
Sbjct: 129 PNEVCTHLLEVL-----NARYRAEDY-QSKGGAGAGAGASSGSCSIADF----TASQSSA 178
Query: 210 GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYS 268
V GL+ Q + Q S+ E G+ EL + I ++ + + + +EG IYS
Sbjct: 179 IVSGLEPKQQAV---FQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYS 235
Query: 269 TIDEFHY 275
+ID H+
Sbjct: 236 SIDADHF 242
>gi|72389098|ref|XP_844844.1| replication Factor A 28 kDa subunit [Trypanosoma brucei TREU927]
gi|62358669|gb|AAX79127.1| replication Factor A 28 kDa subunit, putative [Trypanosoma brucei]
gi|70801378|gb|AAZ11285.1| replication Factor A 28 kDa subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 255
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 47/266 (17%)
Query: 26 SADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEE- 84
+A ++ + R + PVT+K + EA G+ + +I+G E+T T+VG V E
Sbjct: 12 AAANSNAATQQRRVHPIRPVTIKQLLEAQRVGEGVT--VIDGREVTQATVVGRVVGYEND 69
Query: 85 ----------RASDVNFTLDDGTGRVVCKRW--ASEVFDTREMEAIQDGMYVRLIGNLKS 132
A + + DGTG VV ++W A + D ++ YVR G +K
Sbjct: 70 SDNRFSGGALTAKHHGYRITDGTGVVVVRQWMDADQQDDPLPLQC-----YVRAAGTVKM 124
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHL---QNSKSQVQGFPSSQPQMVDSSLNT 189
+Q IV +VR V++ +E+ H+++ I HL Q S+ P++ P NT
Sbjct: 125 WQ-NSPIVTGTVRLVSDCNELNYHFLDVILTHLRLTQGSRRPSSAAPAAVP-------NT 176
Query: 190 SARTGLSGYQTAPTNLSSQF-GVDGLKDCDQMILDYLQQPSSSERERGVHVNELSE---Q 245
++ G + + F G DG ++++ ++Q + E G+ ++E+S Q
Sbjct: 177 ASAVG----------VQNMFPGGDGKVFTTDVVINTIRQKARG--EEGLSMDEISAAALQ 224
Query: 246 LKIPQKKIMDSIASLENEGLIYSTID 271
+ + ++I +L EG IY T D
Sbjct: 225 YGFSGQDVRNAIRTLMEEGKIYQTHD 250
>gi|195118913|ref|XP_002003976.1| GI18202 [Drosophila mojavensis]
gi|193914551|gb|EDW13418.1| GI18202 [Drosophila mojavensis]
Length = 242
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 24/237 (10%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+G++ + VK I ++ + NF + + V +VG+V N E ++ + +TL+D +GR
Sbjct: 25 EGIISLLVKQILDSP-----EGNFKMFDVTYALVCVVGIVRNVETSSTKITYTLEDHSGR 79
Query: 100 VVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIE 159
+ W E D + + YV++ G+++ G+K ++ F + V + +EV H +E
Sbjct: 80 IDAHYWLEE-GDAIKAPDVMINNYVKIYGSVRPQAGQKVLMVFKLINVLDPNEVCTHVLE 138
Query: 160 CIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQ 219
++ + + V+G S P + S + +S Q+ V GL D
Sbjct: 139 ALHSRYKAEEYHVKGNSSHAP-------SNSTMSNVSASQSNAI-------VAGL---DS 181
Query: 220 MILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHY 275
L Q S+ E G++ EL + I Q ++ + + + +EG IYS+ID H+
Sbjct: 182 KQLAVFQAIKSNCSEEGINRRELKAKFSHISQTELNNILDFMISEGHIYSSIDPDHF 238
>gi|158296779|ref|XP_317127.3| AGAP008332-PA [Anopheles gambiae str. PEST]
gi|157014875|gb|EAA12428.4| AGAP008332-PA [Anopheles gambiae str. PEST]
Length = 247
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 114/241 (47%), Gaps = 27/241 (11%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
++G++P+ ++ + E+S G + G + +TLV ++ N + ++ V + L+D TG
Sbjct: 25 AEGVLPLVIEQVLESSDGG-----ISLFGHQYAMITLVAIIRNVDYSSTKVTYQLEDHTG 79
Query: 99 RVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYI 158
R+ W + T +I Y R++G++++ G K I+ F + + + +EVT H +
Sbjct: 80 RIDAHLWIEDDGVT-STPSIVPQSYARVVGSVRNQGGSKSIMIFKIDQINSPNEVTTHLL 138
Query: 159 ECIYFHL---QNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLK 215
E ++ +NSK +V+G +T+A +G ++ + G++G +
Sbjct: 139 EVLHARYKGEENSKRKVEG-----------GFDTNANATSNGGFMESDSVGASLGLNGKQ 187
Query: 216 DCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFH 274
L + S + G+ EL + I ++ I + EG+IY+T+D H
Sbjct: 188 ------LAVYKAIKSHVSDIGISRKELQAKFSHISPSEMQSIIDHMGQEGMIYTTVDTDH 241
Query: 275 Y 275
+
Sbjct: 242 F 242
>gi|195385024|ref|XP_002051208.1| GJ14710 [Drosophila virilis]
gi|194147665|gb|EDW63363.1| GJ14710 [Drosophila virilis]
Length = 242
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 113/237 (47%), Gaps = 24/237 (10%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+G++ + VK I ++ + NF + + V VG+V N E ++ + ++L+D +GR
Sbjct: 25 EGIISLLVKQILDSP-----EGNFKMFDVTYALVCAVGIVRNIETSSTKITYSLEDHSGR 79
Query: 100 VVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIE 159
+ W E D + + YV++ G+++S G+K ++ F + V + +EV H +E
Sbjct: 80 IDAHYWLEE-GDAIKSPDVMINNYVKIYGSVRSQAGQKVLMVFKLINVLDPNEVCTHILE 138
Query: 160 CIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQ 219
++ + + V+G +TSA + T TN+++ + D
Sbjct: 139 ALHSRYKAEEYHVKG-------------DTSA----AASNTLMTNVTATQSNAIVAGLDS 181
Query: 220 MILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHY 275
L Q S+ E G+H EL+ + I Q ++ + + + +EG IYS+ID H+
Sbjct: 182 KQLAVFQAIKSNCSEEGIHRRELNAKFSHISQAEMNNILDFMISEGHIYSSIDADHF 238
>gi|342180984|emb|CCC90461.1| putative replication Factor A 28 kDa subunit [Trypanosoma
congolense IL3000]
gi|343475586|emb|CCD13058.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 276
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P+++ R + PVT+K + A G+ + +I+G E+T T+VG V E+ S
Sbjct: 35 PNASQPQRRMHPIRPVTIKQLLGAQRVGEGVT--VIDGREVTQATVVGRVIGYEDDGSSG 92
Query: 90 NFT-------------LDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGK 136
NF + DGTG VV ++W ++ E + YVR G +K +Q
Sbjct: 93 NFAAGGALTAKHHGYRITDGTGIVVVRQWMDA---GQQDEPLPQQCYVRAAGTVKMWQ-N 148
Query: 137 KQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLS 196
IV +VR V++ +E+ H+++ I HL+ ++ G S + + NT++ GL
Sbjct: 149 APIVTGTVRLVSDCNELNYHFLDVILTHLRLTR----GERRSTGNVPAAVSNTASAVGLQ 204
Query: 197 GYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELS---EQLKIPQKKI 253
P + D ++L+ ++Q + + G+ ++E++ + + +
Sbjct: 205 NMM--PGGEEKLYATD-------VVLNTIKQKARG--DDGLSMDEITAAAQHYGFNAQDV 253
Query: 254 MDSIASLENEGLIYSTIDEFHYKF 277
+I +L EG IY T D +KF
Sbjct: 254 RAAIRTLSEEGKIYQTHD---FKF 274
>gi|403357173|gb|EJY78206.1| hypothetical protein OXYTRI_24641 [Oxytricha trifallax]
Length = 285
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 125/259 (48%), Gaps = 21/259 (8%)
Query: 25 QSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEE 84
+S + ++R + PVT+KM+++A+ DD I+G I ++ +VG + + E
Sbjct: 35 RSGNNAGGNDQARKKRLFTPVTIKMLTDAALGPDDTCE--IDGEMIQDIIIVGRIIARTE 92
Query: 85 RASDVNFTLDDGTG--RVVCKRWASEVFDT--REMEAIQDGMYVRLIGNLKSFQGKKQIV 140
+ + F ++D TG +++ + + + T + E Q MY ++ G +++++ +K IV
Sbjct: 93 ESMRIQFEVNDSTGTFKIIFYKKDANMIPTALKNFEYTQ-FMYAKIFGTIRAYKEEKGIV 151
Query: 141 AFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLS-GYQ 199
++ V F+E+T H ++ + K + SQ V+ + A G S G Q
Sbjct: 152 GTHIKKVEKFEEMTNHLLQVFVANQMRLKGVL-----SQQDFVNDQVGKQAALGQSQGNQ 206
Query: 200 TAPTNLSSQFGVDG-LKDCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQKKIMDS 256
+ +S F G LKD I+ + S++ + +H ++ L K + ++
Sbjct: 207 NSKGGMSMGFSGSGDLKDMIPAIMTEM-----SKQTKFIHKKDIYSMLQNKYDENTYENT 261
Query: 257 IASLENEGLIYSTIDEFHY 275
+ L ++G+IY+T D+ Y
Sbjct: 262 LQRLCDDGVIYTTYDKDVY 280
>gi|282400156|ref|NP_001164201.1| replication protein A2 [Tribolium castaneum]
gi|270012721|gb|EFA09169.1| hypothetical protein TcasGA2_TC005650 [Tribolium castaneum]
Length = 254
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 37/281 (13%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARS----RDSQGLVPVTVKMISEASHS 56
MFS QFD SN GGF+ + D STA+ R Q +VP+ + I E +
Sbjct: 1 MFSVDQFDISN---NGGFV------NDDNQGSTAKKKQQVRRMQSVVPLFISHILECT-- 49
Query: 57 GDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDT-REM 115
F + G+ + +VG++ + E + + T++D + + W DT +
Sbjct: 50 ---DEEFNLYGMPVHFADVVGVLKDFEVQTTKATCTIEDHSASIKAIMWLETDNDTVTAL 106
Query: 116 EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGF 175
+++ YVR+ G++++ G+K I+ + PV + + VT H +E I L +
Sbjct: 107 PPVKENCYVRVFGSVRTQDGEKMIMILKILPVDDLNIVTNHLLEIIQAKLYAERLADGRL 166
Query: 176 PSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERER 235
P++ LS + ++ GLK I++ L+ S
Sbjct: 167 PAA---------------NLSTTVATTSTSAAANNSSGLKPMQVKIINLLKPIKS---RT 208
Query: 236 GVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
G+ +E+ + ++ ++ L +EG +Y+T+D HYK
Sbjct: 209 GLSRSEIMQHFGAQAREAEVALDFLLDEGHVYTTVDTDHYK 249
>gi|157104136|ref|XP_001648269.1| insect replication protein a [Aedes aegypti]
gi|108869254|gb|EAT33479.1| AAEL014250-PA [Aedes aegypti]
Length = 247
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 120/267 (44%), Gaps = 27/267 (10%)
Query: 10 SNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLE 69
+++F GGF + A A+ ++G++P+T++ I E+S SG + G+
Sbjct: 2 NDSFGAGGFSANATGGGA------AQENKAEGVLPLTIRQILESSESG-----VQLFGIH 50
Query: 70 ITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGN 129
+ VT V +V + + ++ + + L+D TG+V W E DT + + Y R+ G+
Sbjct: 51 YSMVTFVAIVRSVDHSSTKITYGLEDHTGQVDAHLWLEE-GDTNSVPGMMTHSYARVFGS 109
Query: 130 LKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNT 189
++ G K ++ + + V++ ++VT H +E + N++ + + + +
Sbjct: 110 VRHQGGSKAVMIYKIEQVSSPNDVTTHLLEVL-----NARYKGEEYAKGGGAGGSGGESE 164
Query: 190 SARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIP 249
G+ N G+ G Q+I+ + S + G+ EL ++
Sbjct: 165 KNTASSGGFMETDGN---AMGLTG----KQLIV--YKAIKSHMSDIGISRQELQQKFPHI 215
Query: 250 QKKIMDSIAS-LENEGLIYSTIDEFHY 275
M SI + EG++Y+++D H+
Sbjct: 216 SASEMQSITDYMTQEGIVYTSVDSDHF 242
>gi|242042563|ref|XP_002468676.1| hypothetical protein SORBIDRAFT_01g050092 [Sorghum bicolor]
gi|241922530|gb|EER95674.1| hypothetical protein SORBIDRAFT_01g050092 [Sorghum bicolor]
Length = 83
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 46/63 (73%)
Query: 216 DCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
D + +LD L +P++ ERE GVHV+E+ ++ ++P++ I D+I L + G IY+TID+FH+
Sbjct: 13 DLLKQVLDILHEPANIEREHGVHVDEIVKRFRLPERNIRDAIMQLVDMGCIYNTIDDFHF 72
Query: 276 KFA 278
K A
Sbjct: 73 KSA 75
>gi|344233012|gb|EGV64885.1| replication protein A, subunit RPA32 [Candida tenuis ATCC 10573]
Length = 251
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PVT+K I+++S D ++F ING+ + V+ VG++ + S T++DGTG +
Sbjct: 38 LTPVTIKQINDSSQPLPD-ADFQINGVNLNMVSFVGVLRKVDNGNSATTLTIEDGTGALE 96
Query: 102 CKRW----ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
++W S V + A YV + G+LK F KK + ++ VT+ ++V H
Sbjct: 97 VRKWIDDNTSSVSEESTKYADMKDKYVYVTGSLKEFSSKKAVQNANITEVTDHNQVLYHN 156
Query: 158 IECIYFHL 165
+ I H+
Sbjct: 157 LSAISVHI 164
>gi|430814638|emb|CCJ28161.1| unnamed protein product [Pneumocystis jirovecii]
Length = 772
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 19/168 (11%)
Query: 115 MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG 174
M+ I D YVR+IG LK+F K+ I A +R +T+ +EV H++E I HL ++ +Q
Sbjct: 1 MKWIPD-TYVRVIGQLKAFNNKRHIGAHHIRLITDLNEVQYHFLEAIAIHLYFTRGPLQN 59
Query: 175 FPSSQPQMVDSSLNTSARTGLSGYQ-----TAPTNLSSQFGVDGLKDCDQMILDYLQ-QP 228
V S +TS +S Y + L++Q + L Q ++ + P
Sbjct: 60 -------GVFSKNHTSVDGNMSHYDFQDSISMKGALNAQIALHNLSPYLQKVMAAVHAAP 112
Query: 229 SSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++E GV++++LS+ I I +I L ++GL+Y+TID+ H K
Sbjct: 113 DTNE---GVNIHQLSKA--IGGGNIEQAIEELTSDGLLYTTIDDEHVK 155
>gi|242011240|ref|XP_002426363.1| Replication protein A 32 kDa subunit, putative [Pediculus humanus
corporis]
gi|212510440|gb|EEB13625.1| Replication protein A 32 kDa subunit, putative [Pediculus humanus
corporis]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GG F+ ++P SS R Q L PVTV+ + EA G + L T V+
Sbjct: 9 GGYFVGNEPTTPNQSVSSAIRQ---QFLCPVTVRQVLEAPEQG-----LKVGSLTATMVS 60
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM---YVRLIGNLK 131
L G+V N E ++ + F+L D TG + C W E D ++ + + Y + G +K
Sbjct: 61 LCGVVSNVEITSTTIKFSLTDDTGIIDCLEWL-ETQDNSKISKTTNLLENNYYHVYGCVK 119
Query: 132 SFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
QG ++I+ F VT+F+E+T +E +
Sbjct: 120 YPQGSRRIMVFKTVKVTDFNEITAFMLEVL 149
>gi|340053618|emb|CCC47911.1| putative replication Factor A 28 kDa subunit [Trypanosoma vivax
Y486]
Length = 260
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVN----------FTL 93
PVT+K + EA GD + +I+ E+T T+VG V E+ S V + +
Sbjct: 36 PVTIKQLLEAQRVGDGVT--VIDEREVTQATVVGRVVGYEDGGSAVGGGALTAKHHGYRI 93
Query: 94 DDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
DGTG VV ++W D +E E + YVR G +K +Q IV +VR V++ +E+
Sbjct: 94 TDGTGFVVVRQWMDS--DQQE-EPLPLQCYVRAAGTVKMWQ-NAPIVTGTVRLVSDNNEL 149
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
H+++ I HL+ ++ + PSS + S NT + GL P + F D
Sbjct: 150 NYHFLDVILTHLRLTRGDKK--PSSSAGLTVS--NTVSAVGLQ--NVIPGGENKLFATD- 202
Query: 214 LKDCDQMILDYLQQPSSSERERGVHVNELSEQLK---IPQKKIMDSIASLENEGLIYSTI 270
++L+ ++Q S + G+ ++EL+ + + ++ +L EG +Y T
Sbjct: 203 ------VLLNTIRQKSHG--DVGLSMDELTAAAQPYGFNAHDVRMAMRTLTEEGKVYQTH 254
Query: 271 DEFHYKF 277
D +KF
Sbjct: 255 D---HKF 258
>gi|268565217|ref|XP_002639372.1| C. briggsae CBR-RPA-2 protein [Caenorhabditis briggsae]
Length = 286
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 34/265 (12%)
Query: 30 PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDV 89
P S A + + VPVT+ ++E + DDK ++I V VG+V + +
Sbjct: 28 PDSKAATLGDRLPVPVTISNLNEHFSATDDK--YIIGNFRFATVQTVGIVKEINQEGTTW 85
Query: 90 NFTLDDGTGRVVCKR---WASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRP 146
++ L D + R + +E ++ + +I +G VR IG LKSF G I+ F++ P
Sbjct: 86 SYDLCDPNNEAMEYRALKYENEGSNS-DQSSIVEGTRVRAIGKLKSFDGSNSIMLFNITP 144
Query: 147 VTNFDEVTCHYIEC----IYFHLQ-----NSKSQVQGF------PSS---QPQMVDSSLN 188
VT+ + T +E ++F S + +GF P S Q M SS
Sbjct: 145 VTDDKDFTIFELEAEAARLFFQKNMNDKLKSDASSRGFQGMLAPPKSRAGQQPMQQSSQG 204
Query: 189 TSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKI 248
+ + L Q SQ V+G D Q + L+ S E G ++ ++EQL+
Sbjct: 205 SDKKERLYPAQ-------SQVNVEG--DLRQRVTAVLKGVSEEAHEEGSNILWIAEQLQE 255
Query: 249 PQ-KKIMDSIASLENEGLIYSTIDE 272
KK+ D ++ + GL Y+T DE
Sbjct: 256 KDIKKLRDCLSGMVENGLAYTTTDE 280
>gi|225709452|gb|ACO10572.1| Replication protein A 32 kDa subunit [Caligus rogercresseyi]
Length = 260
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 35 RSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLD 94
R+R +Q LVPVT+ + E + + + I GLE+ V L+G V + A+ ++L
Sbjct: 26 RTR-AQNLVPVTISSVLECT-----EESLSIEGLEVGMVCLLGKVVSISNEATKGVYSLK 79
Query: 95 DGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
D T ++ +W E D + + +D M+ R+IG +++ GKK I+AF++ PV E+
Sbjct: 80 DKTAQIDVIQWLDEGQDASKDDVCED-MHARVIGTVRNSGGKKHIMAFNISPVEAMSEIK 138
Query: 155 CHYIECIYFHLQ 166
+E Y L+
Sbjct: 139 GLTLEVEYARLK 150
>gi|403298742|ref|XP_003940167.1| PREDICTED: replication protein A 30 kDa subunit [Saimiri
boliviensis boliviensis]
Length = 261
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F + G+ ++ V++VG++ E+ ++ + + +DD T + + R +++ + G+
Sbjct: 64 FKVRGITVSQVSIVGIIRGAEKASNHICYKIDDMTAKPIEARQWFGREKVKQLTPLSVGL 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K++ VQ P S
Sbjct: 124 YVKVFGILKCPAGTKSLEVLKIYVLEDMNEFTVHILESVNAHMMLDKARGDATVQSVPVS 183
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N +R ++D + L+ R G
Sbjct: 184 ASEVDDAGDNDESRRNF------------------IRD------EVLRLIQECPRLEGRS 219
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++E+ QL + + I + I L EG IY T+D H+K A
Sbjct: 220 IHEIHAQLCHLGIQAIKEVIDYLTLEGHIYPTVDREHFKSA 260
>gi|223967031|emb|CAR93252.1| CG9273-PA [Drosophila melanogaster]
Length = 246
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+G+VP+ VK I +A + N + G++ +V +V N E ++ + +TL+D +GR
Sbjct: 25 EGIVPLVVKQIVDAP-----EGNIELFGMQYAMACVVAIVRNVETSSTKITYTLEDHSGR 79
Query: 100 VVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIE 159
+ W E D + + YV++ G +S G K ++ F + PV + +EV H +E
Sbjct: 80 IDAHYWLEE-GDALKAPEVMVNNYVKVYGTTRSQGGSKTLMIFKLLPVLDPNEVCTHLLE 138
Query: 160 CIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQ 219
+ N++ + + + S+ + +S ++ + T S V GL+ Q
Sbjct: 139 VL-----NARYRAEDY-QSKGGAGAGAGASSGSGSIADF----TASQSSAIVSGLEPKQQ 188
Query: 220 MILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+ Q S+ E G+ EL + I ++ + + + +EG IYS+ID H+
Sbjct: 189 AV---FQAIKSNVSEEGISRKELKAKFSHISDSELTNILDFMISEGHIYSSIDADHF 242
>gi|195053087|ref|XP_001993462.1| GH13058 [Drosophila grimshawi]
gi|193900521|gb|EDV99387.1| GH13058 [Drosophila grimshawi]
Length = 240
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 34/241 (14%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+G++ + VK I ++ + NF + + V VG+V N E ++ + ++++D +GR
Sbjct: 25 EGIISLLVKQILDSP-----EGNFKMFDVAYALVCAVGIVRNIETSSTKITYSIEDHSGR 79
Query: 100 VVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIE 159
+ W E D + + YV++ G+++S G+K ++ F + V + +EV H +E
Sbjct: 80 IDAHYWLEE-GDAIKSPDVMLNNYVKIYGSVRSQAGQKVLMVFKLLNVLDPNEVCTHVLE 138
Query: 160 CIY--FHLQNSKSQVQGFPSSQ--PQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLK 215
++ + + + G PS+Q P V +S + + GL Q A
Sbjct: 139 ALHSRYKAEEYNHKGDGGPSNQLMPN-VTASQSNAIVAGLDSKQLA-------------- 183
Query: 216 DCDQMILDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFH 274
Q S+ E G+H ELS + I Q ++ + + + +EG IYS+ID H
Sbjct: 184 --------VFQAIKSNCSEEGIHRRELSAKFSHISQSEMTNILDFMISEGHIYSSIDPDH 235
Query: 275 Y 275
+
Sbjct: 236 F 236
>gi|302406823|ref|XP_003001247.1| replication factor-A protein [Verticillium albo-atrum VaMs.102]
gi|261359754|gb|EEY22182.1| replication factor-A protein [Verticillium albo-atrum VaMs.102]
Length = 181
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPS---SQ 179
YVR+ G +KSF GK+ + A +R VT+F+EV H +E Y HL +K + G +
Sbjct: 19 YVRVWGRIKSFNGKRHVGAHFLRAVTDFNEVNYHLLESTYVHLFFTKGPLGGAKAEDNGD 78
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYL-QQPSSSERERGVH 238
VD + + + + A T SS+ V Q + ++L P +E GVH
Sbjct: 79 GMFVDGGGHGNNTSNNNNASHA-TGQSSK--VAQCTPMGQKMYNFLVNAPGGNE---GVH 132
Query: 239 VNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFAR 279
+N ++ + + ++ + L +GL+Y+TID+ + +R
Sbjct: 133 MNVIASGAGMSMRDVLGAADDLLGQGLVYTTIDDETWGHSR 173
>gi|326439177|ref|NP_001191993.1| replication protein A2 [Acyrthosiphon pisum]
gi|239790330|dbj|BAH71733.1| ACYPI003814 [Acyrthosiphon pisum]
Length = 249
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 71 TNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNL 130
T+V +VG++ E +A FT++D TGR++C +W E +R + I++ Y +++G+
Sbjct: 48 THVVVVGIIKQVETQALKNMFTIEDNTGRLLCIQWGDENELSRYPKLIENA-YFKVVGSK 106
Query: 131 KSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQV-----QGFPSSQPQMVDS 185
+ K ++ SVRP+ +E+T H + I + V Q ++Q + S
Sbjct: 107 RMQNDKVTLLCHSVRPLETLNELTHHLLSIIALPYITEEINVASGTQQSTATNQKDFLMS 166
Query: 186 SLNTSARTGLSGYQTAPTNLS---SQFGV-DGLKDCDQMILDYLQQPSSSERERGVHVNE 241
NT +G+ NLS Q V +K C + E G +
Sbjct: 167 GDNT------NGFMDTTNNLSLNPRQLKVYTVIKRC--------------QDEAGYSALD 206
Query: 242 LSEQL--KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ + L K+P +I ++ EG I+STIDE HYK
Sbjct: 207 IQKILPEKMPLSEIEKILSFFIEEGHIFSTIDENHYK 243
>gi|296235951|ref|XP_002763117.1| PREDICTED: replication protein A 30 kDa subunit-like [Callithrix
jacchus]
Length = 261
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F + G+ ++ V++VG++ E+ ++ + + +DD T + + R +++ + G+
Sbjct: 64 FKVRGITVSQVSVVGVIREAEKASNHICYKIDDMTAKPIEARQWFGREKVKQLTPLSVGL 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K++ ++ P S
Sbjct: 124 YVKVFGILKCPAGTKSLEVLKIYVLEDMNEFTVHILETVSAHMMLYKARGDTTLESVPVS 183
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N +R ++D + L+ R+ G
Sbjct: 184 PSEVDDAGDNDESRRNF------------------IRD------EVLRLIHECPRQEGRS 219
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++EL QL + + I + I L EG IY T+D H+K A
Sbjct: 220 IHELQAQLCDLSIQAIKEVIDYLTLEGHIYPTVDREHFKSA 260
>gi|383847491|ref|XP_003699386.1| PREDICTED: replication protein A 32 kDa subunit-like [Megachile
rotundata]
Length = 244
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 37/246 (15%)
Query: 36 SRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDD 95
S+ + ++P+ +K I++++ ++ + G+ + +T V +V N ++ + + +D
Sbjct: 29 SKRVENVIPIMIKHITQSN------NDLQLWGMTVHMITFVAIVRNIGNTSTKMTYEFED 82
Query: 96 GTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTC 155
TG + RW + R +I YVR+ G++K K ++A + P+T +E+T
Sbjct: 83 ETGTISGFRWLERM--NRPDTSINLNSYVRVYGHIKEQNETKYVLALKILPLTKLNELTT 140
Query: 156 HYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLK 215
H +E Y L+ K M + RTG G T L + GL
Sbjct: 141 HLLEVSYVTLRAEK------------MFNIE---KERTG--GTATNDVLLEDN-NISGLT 182
Query: 216 DCDQMILDYLQQPSSSER--ERGVHVNELSEQLKIPQK---KIMDSIASLENEGLIYSTI 270
++ +Q + SE ER V + +IPQ + D I L +EG IY+T+
Sbjct: 183 KEQALVFKAIQAENDSENGIERRV------LKTRIPQNILPYVDDIINFLTSEGHIYTTL 236
Query: 271 DEFHYK 276
+ H+K
Sbjct: 237 TDDHFK 242
>gi|397478178|ref|XP_003810430.1| PREDICTED: replication protein A 30 kDa subunit [Pan paniscus]
Length = 261
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F + G+ ++ V++VG++ E+ ++ + + +DD T + + R +++ + G+
Sbjct: 64 FKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGREKVKQVTPLSVGV 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K++ V+ P S
Sbjct: 124 YVKVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVS 183
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N + ++D + L+ + G
Sbjct: 184 PSEVNDAGDNDESHRNF------------------IQD------EVLRLIHECPHQEGKS 219
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++EL QL + K I ++I L EG IY T+D H+K A
Sbjct: 220 IHELRAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 260
>gi|119623199|gb|EAX02794.1| replication protein A4, 34kDa [Homo sapiens]
Length = 261
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F + G+ ++ V++VG++ E+ ++ + + +DD T + + R +++ + G+
Sbjct: 64 FKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGREKVKQVTPLSVGV 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K++ V+ P S
Sbjct: 124 YVKVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVS 183
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N + ++D + L+ + G
Sbjct: 184 PSEVNDAGDNDESHRNF------------------IQD------EVLRLIHECPHQEGKS 219
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++EL QL + K I ++I L EG IY T+D H+K A
Sbjct: 220 IHELRAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 260
>gi|9558731|ref|NP_037479.1| replication protein A 30 kDa subunit [Homo sapiens]
gi|14917036|sp|Q13156.2|RFA4_HUMAN RecName: Full=Replication protein A 30 kDa subunit; Short=RP-A p30;
AltName: Full=Replication factor A protein 4; Short=RF-A
protein 4
gi|20067243|gb|AAM09569.1|AF494047_1 replication protein A complex 34 kDa subunit RPA4 [Homo sapiens]
gi|5729680|gb|AAB08488.2| replication protein A complex 34 kd subunit homolog Rpa4 [Homo
sapiens]
gi|46854555|gb|AAH69791.1| Replication protein A4, 34kDa [Homo sapiens]
gi|46854571|gb|AAH69808.1| Replication protein A4, 34kDa [Homo sapiens]
gi|46854955|gb|AAH69824.1| Replication protein A4, 34kDa [Homo sapiens]
gi|74353576|gb|AAI04014.1| Replication protein A4, 34kDa [Homo sapiens]
gi|74355202|gb|AAI04015.1| Replication protein A4, 34kDa [Homo sapiens]
gi|190691999|gb|ACE87774.1| replication protein A4, 34kDa protein [synthetic construct]
gi|254071361|gb|ACT64440.1| replication protein A4, 34kDa protein [synthetic construct]
gi|312152764|gb|ADQ32894.1| replication protein A4, 34kDa [synthetic construct]
Length = 261
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F + G+ ++ V++VG++ E+ ++ + + +DD T + + R +++ + G+
Sbjct: 64 FKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGREKVKQVTPLSVGV 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K++ V+ P S
Sbjct: 124 YVKVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVS 183
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N + ++D + L+ + G
Sbjct: 184 PSEVNDAGDNDESHRNF------------------IQD------EVLRLIHECPHQEGKS 219
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++EL QL + K I ++I L EG IY T+D H+K A
Sbjct: 220 IHELRAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 260
>gi|114689388|ref|XP_001136507.1| PREDICTED: replication protein A 30 kDa subunit [Pan troglodytes]
Length = 261
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDG 121
F + G+ ++ V++VG++ E+ ++ + + +DD T + + ++W +++ + G
Sbjct: 64 FKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEVRQWFGR-EKVKQVTPLSVG 122
Query: 122 MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPS 177
+YV++ G LK G K + + + + +E T H +E + H+ K++ V+ P
Sbjct: 123 VYVKVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPV 182
Query: 178 SQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGV 237
S ++ D+ N + ++D + L+ + G
Sbjct: 183 SPSEVNDAGDNDESHRNF------------------IQD------EVLRLIHECPHQEGK 218
Query: 238 HVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++EL QL + K I ++I L EG IY T+D H+K A
Sbjct: 219 SIHELRAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 260
>gi|407839347|gb|EKG00293.1| replication Factor A 28 kDa subunit, putative [Trypanosoma cruzi]
Length = 264
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 33/241 (13%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEE----------RASDVNFTL 93
PVT+K + EA G+ +++G E+T T+VG V E+ A + +
Sbjct: 39 PVTIKQLLEAQRVGE--GVMVVDGREVTQATVVGRVIGYEDDTANRVTGALTAKHYGYRI 96
Query: 94 DDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
DGTG VV ++W D +E E + YVR G +K +Q IV +VR V++ +E+
Sbjct: 97 TDGTGLVVVRQWMDA--DHQE-EPLPVQCYVRASGTVKVWQ-NAPIVTGTVRLVSDCNEL 152
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
HY++ I HL+ ++ + + V + NT++ G+ P F D
Sbjct: 153 NYHYLDVILTHLRLTRGDKH---AKEEGAVPAVSNTASTLGVQ--NMLPGGGGKVFATD- 206
Query: 214 LKDCDQMILDYLQQPSSSERERGVHVNEL---SEQLKIPQKKIMDSIASLENEGLIYSTI 270
++L+ ++Q ++ + G+ ++EL + Q + ++ +L EG +Y T
Sbjct: 207 ------VLLNAIKQ--NARGDAGLSMDELAAAARQYGFSVNDVRVALRTLAAEGSVYQTH 258
Query: 271 D 271
D
Sbjct: 259 D 259
>gi|71410456|ref|XP_807521.1| replication Factor A 28 kDa subunit [Trypanosoma cruzi strain CL
Brener]
gi|70871542|gb|EAN85670.1| replication Factor A 28 kDa subunit, putative [Trypanosoma cruzi]
Length = 264
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 33/241 (13%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEE----------RASDVNFTL 93
PVT+K + EA G+ +++G E+T T+VG V E+ A + +
Sbjct: 39 PVTIKQLLEAQRVGE--GVMVVDGREVTQATVVGRVIGYEDDTTNRVTGALTAKHYGYRI 96
Query: 94 DDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
DGTG VV ++W D +E E + YVR G +K +Q IV +VR V++ +E+
Sbjct: 97 TDGTGLVVVRQWMDA--DHQE-EPLPVQCYVRASGTVKVWQ-NAPIVTGTVRLVSDCNEL 152
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
HY++ I HL+ ++ + + V + NT++ G+ P F D
Sbjct: 153 NYHYLDVILTHLRLTRGDKH---AKEEGAVPAVSNTASTLGVQ--NMLPGGGGKVFATD- 206
Query: 214 LKDCDQMILDYLQQPSSSERERGVHVNEL---SEQLKIPQKKIMDSIASLENEGLIYSTI 270
++L+ ++Q ++ + G+ ++EL + Q + ++ +L EG +Y T
Sbjct: 207 ------VLLNAIKQ--NARGDAGLSMDELAAAARQYGFSVNDVRVALRTLAAEGSVYQTH 258
Query: 271 D 271
D
Sbjct: 259 D 259
>gi|47026872|gb|AAT08661.1| single-stranded DNA-binding replication protein A [Hyacinthus
orientalis]
Length = 88
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 194 GLSGYQT-APTNLSSQFGVDGLK-DCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQK 251
G+ QT P+ +S+ G + D +M+LD Q+PSS + GVHV+E+ ++L +P+K
Sbjct: 2 GIKREQTPVPSQISTHTSNGGSETDIYKMVLDVFQEPSSLASDHGVHVDEVVKRLGLPEK 61
Query: 252 KIMDSIASLENEGLIYSTIDEFHYK 276
KI ++I + G IYSTID++H+K
Sbjct: 62 KIKEAIDYHVDTGHIYSTIDDYHFK 86
>gi|297710508|ref|XP_002831919.1| PREDICTED: replication protein A 30 kDa subunit [Pongo abelii]
Length = 261
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F I G+ ++ V++VG++ ++ ++ + + +DD T + + R +++ + G+
Sbjct: 64 FKIRGIIVSQVSIVGVIRGADKASNHICYKIDDMTAKPIEARQWFGREKVKQVTPLTVGV 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK----SQVQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K + V+ P S
Sbjct: 124 YVKVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKACRDTTVESVPVS 183
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N + ++D + L+ + G
Sbjct: 184 PSEVNDAGDNDESHRSF------------------IRD------EVLRLIHECPHQEGKS 219
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++EL QL + K I ++I L EG IY T+D H+K A
Sbjct: 220 IHELQAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 260
>gi|426396624|ref|XP_004064533.1| PREDICTED: replication protein A 30 kDa subunit [Gorilla gorilla
gorilla]
Length = 264
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F + G+ ++ V++VG++ E+ ++ + + +DD T + + R +++ + G+
Sbjct: 67 FKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGREKVKQVTPLSVGV 126
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K++ V+ P S
Sbjct: 127 YVKVFGILKCPTGTKSLEVLKIHVLKDMNEFTVHILETVNAHMMLDKARCDTTVESVPVS 186
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N + ++D + L+ + G
Sbjct: 187 PSEVNDAGDNDESHRSF------------------IQD------EVLRLIHECPHQEGKS 222
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++EL QL + K I ++I L EG IY T+D H+K A
Sbjct: 223 IHELRAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 263
>gi|332251800|ref|XP_003275037.1| PREDICTED: replication protein A 30 kDa subunit-like [Nomascus
leucogenys]
Length = 261
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F + G+ ++ V++VG++ E+ ++ + + +DD T + + R +++ + G+
Sbjct: 64 FKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGREKVKQVTPLAVGV 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K++ V+ P S
Sbjct: 124 YVKVFGILKCPTGTKSLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVS 183
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N + + +L + + E G
Sbjct: 184 PSEVDDAGDNDESHRNFIRNE---------------------VLRLIHECPHQE---GKS 219
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
++EL QL + K I ++I L EG IY T+D H+K A
Sbjct: 220 IHELQAQLCDLSVKAIKEAIDYLTVEGHIYPTVDREHFKSA 260
>gi|407420707|gb|EKF38640.1| replication Factor A 28 kDa subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 322
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 33/241 (13%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEE----------RASDVNFTL 93
PVT+K + EA G+ +++G E+T T+VG V E+ A + +
Sbjct: 97 PVTIKQLLEAQRVGEGV--MVVDGREVTQATVVGRVIGYEDDTANRVTGALTAKHYGYRI 154
Query: 94 DDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
DGTG VV ++W D +E E + YVR G +K +Q IV +VR V++ +E+
Sbjct: 155 TDGTGLVVVRQWMDA--DHQE-EPLPVQCYVRASGTVKVWQ-NAPIVTGTVRLVSDCNEL 210
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
HY++ I HL+ ++ + V + NT++ G+ P F D
Sbjct: 211 NYHYLDVILTHLRLTRGDKH---AKDEGAVPAVSNTASTLGVQ--NMLPGGGGKVFATD- 264
Query: 214 LKDCDQMILDYLQQPSSSERERGVHVNEL---SEQLKIPQKKIMDSIASLENEGLIYSTI 270
++L+ ++Q ++ + G+ ++EL + Q + ++ +L EG +Y T
Sbjct: 265 ------VLLNAIKQ--NARGDVGLTMDELAAAARQYGFSVNDVRVALRTLAAEGSVYQTH 316
Query: 271 D 271
D
Sbjct: 317 D 317
>gi|50555129|ref|XP_504973.1| YALI0F03993p [Yarrowia lipolytica]
gi|49650843|emb|CAG77780.1| YALI0F03993p [Yarrowia lipolytica CLIB122]
Length = 238
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 28 DYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERAS 87
D + + +S ++PVT+K +++A ++ I+G+ +V L G + E + S
Sbjct: 10 DSQGGSQKPANSGSVIPVTLKQLNDAFNNSPPAGALQIDGVPSQHVALCGKIILLESKPS 69
Query: 88 DVNFTLDDGTGRVVCKRWASEVFDTREME-AIQDGMYVRLIGNLKSFQGKKQIVAFSVRP 146
T+DDGTG + + D E +++G Y+ + LKSF K + + V
Sbjct: 70 FFMLTVDDGTGSTDVRLFRKGTEDDENSELTVKEGDYISCVAALKSFNNKWMVNSSGVAA 129
Query: 147 VTNFDEVTCHYIECIYFHLQNSKSQVQG 174
VT+F+ V H ++ + HL+ + ++ G
Sbjct: 130 VTDFNHVIFHQMQSLQTHLKATGAKPSG 157
>gi|109131484|ref|XP_001088106.1| PREDICTED: replication protein A 30 kDa subunit [Macaca mulatta]
Length = 261
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F + G+ ++ V++VG++ E+ ++ + + +DD T + + R +++ + G
Sbjct: 64 FKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGREKVKQVTPLSVGA 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K++ V+ P
Sbjct: 124 YVKVFGILKCPTGTKTLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVF 183
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N + ++D + L+ ++ G
Sbjct: 184 PSEVDDAGDNDESHRSF------------------IRD------EVLRLIHECPQQEGKS 219
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+ EL QL + K I ++I L EG IY T+D+ H+K A
Sbjct: 220 IYELQAQLCDLSLKAIKEAIEYLTVEGHIYPTVDQEHFKSA 260
>gi|340718580|ref|XP_003397743.1| PREDICTED: replication protein A 32 kDa subunit-like [Bombus
terrestris]
Length = 246
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 113/264 (42%), Gaps = 36/264 (13%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTL 75
GGF+ S + R Q +VP + + S + + K + + + +
Sbjct: 14 GGFLESLNKTDG------IKERKKQTIVPAMIGNLLSFSSTDEPK----LWEIPVRMFMI 63
Query: 76 VGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQG 135
VGLV N EE + +++ ++D TG + +W T + +Q YVR++G L+
Sbjct: 64 VGLVRNVEETTTKISYDIEDETGTITALKWLEMDKKTSDT-TMQINTYVRIVGFLREQTD 122
Query: 136 KKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGL 195
K+ I+ + P+ +E+T H +E Y L+ + + T L
Sbjct: 123 KRHILILRMWPLQTLNELTNHILEVTYVTLK------------------AKMMAKDVTTL 164
Query: 196 SGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQK---K 252
Q +L+ + G+ + ++ + + ++ E G+ +++ E K+P K
Sbjct: 165 EKDQDNKNDLNGEAAYYGMSEAQTLVYKIIH--AQNDTESGIERDKIKE--KVPNSLSGK 220
Query: 253 IMDSIASLENEGLIYSTIDEFHYK 276
+ + + L +EG IY+T + ++K
Sbjct: 221 VDEILDFLSSEGHIYTTSSDDYFK 244
>gi|312381550|gb|EFR27277.1| hypothetical protein AND_06147 [Anopheles darlingi]
Length = 330
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 39 SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTG 98
++G++P+ V+ I E+ +G + G + T +TLV ++ + E +++V + L+D TG
Sbjct: 134 AEGVLPMVVRQIKESPDAG-----ISMFGNQYTMITLVAIIRSVEYSSTNVTYQLEDHTG 188
Query: 99 RVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYI 158
R+ W E + +I Y R++G++++ +G K I+ F + V + ++ T H +
Sbjct: 189 RINAHFWLDE-GNANSTPSIVPRSYARVVGSVRNQEGTKVIMIFKIDQVNSPNDYTTHLL 247
Query: 159 ECIY 162
E ++
Sbjct: 248 EVLH 251
>gi|242042565|ref|XP_002468677.1| hypothetical protein SORBIDRAFT_01g050095 [Sorghum bicolor]
gi|241922531|gb|EER95675.1| hypothetical protein SORBIDRAFT_01g050095 [Sorghum bicolor]
Length = 96
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 43/60 (71%)
Query: 216 DCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
D + +LD LQ+P+S E+E GVH +E+ ++ ++P++ I D++ + G IY+TID+FH+
Sbjct: 13 DLLKQVLDILQEPASIEKEYGVHFDEIVKRFRLPERNIWDALMQHVDMGNIYNTIDDFHF 72
>gi|402910745|ref|XP_003918013.1| PREDICTED: replication protein A 30 kDa subunit [Papio anubis]
Length = 261
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGM 122
F + G+ ++ V++VG++ E+ ++ + + +DD T + + R +++ + G
Sbjct: 64 FKVRGIIVSQVSIVGVIRGAEKASNHICYKIDDMTAKPIEARQWFGREKVKQVTPLSVGA 123
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQ----VQGFPSS 178
YV++ G LK G K + + + + +E T H +E + H+ K++ V+ P
Sbjct: 124 YVKVFGILKCPTGTKTLEVLKIHVLEDMNEFTVHILETVNAHMMLDKARRDTTVESVPVF 183
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
++ D+ N + ++D + L+ ++ G
Sbjct: 184 PSEVDDAGDNDESHRSF------------------IRD------EVLRLIHECPQQEGKS 219
Query: 239 VNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDEFHYKFA 278
+ +L QL + K I ++I L EG IY T+D+ H+K A
Sbjct: 220 IYDLQAQLCDLSLKAIKEAIEYLTVEGHIYPTVDQEHFKSA 260
>gi|354548121|emb|CCE44857.1| hypothetical protein CPAR2_406600 [Candida parapsilosis]
Length = 256
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 29/236 (12%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCK 103
PVT+K I EA D F ++ + I+ V +G+V + T++DGTG + +
Sbjct: 43 PVTIKQILEAEQPVPD-GEFKVHNVSISLVGFIGVVRKVHANGVTLFITVEDGTGSIDVR 101
Query: 104 RWASEVFDTREMEA----IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIE 159
+W E ++ E E + YV + G LK + G K I SV + + +++ H++
Sbjct: 102 KWVDENINSVEEEKERYMVFLNKYVFVGGALKVYNGNKSIQNASVSLIEDSNQIIYHHLS 161
Query: 160 CIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQ 219
I HL++ QG S V+ S ++ VD
Sbjct: 162 AIDNHLKS-----QGVTKSSGSAVNGS------------------QGNKLFVDDEGSTTD 198
Query: 220 MILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHY 275
+L++++Q S + E GV ++ ++++L I +K+ L G IY ++ Y
Sbjct: 199 RVLNFIRQESKTMPE-GVPISFITQKLSISEKEGEKHCNDLVESGKIYVGFNDGGY 253
>gi|403356006|gb|EJY77591.1| Replication protein A 30 kDa subunit [Oxytricha trifallax]
Length = 467
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 22 QPPQS-ADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVY 80
+PPQS A+Y +S+ VPVT+KM+ E DD F +G I N+ ++G +
Sbjct: 144 KPPQSHAEYSQQVKKSKI---FVPVTLKMVQECGARHDDVCEF--DGDVICNIVVLGRLI 198
Query: 81 NKEERASDVNFTLDDGTGRVVCKRWASEVFDTREM------EAIQDGMYVRLIGNLKSFQ 134
K F ++D T + + EM + +QD YV++ G ++ F+
Sbjct: 199 QKRTEPQRTQFEINDTTSSFRILFYHKSESEQPEMIRKLNAKPLQD--YVKIFGQIQVFK 256
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFH 164
+K I+ +R V + DE+T H++ H
Sbjct: 257 DQKAIIGAFIRQVNSSDEITNHFLSVFTSH 286
>gi|405975154|gb|EKC39744.1| Replication protein A 32 kDa subunit [Crassostrea gigas]
Length = 123
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 146 PVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNL 205
PV + +EVT H +E + HL SK G S P S+ G + Y + +
Sbjct: 3 PVMDMNEVTYHMLEVTHSHLALSKHAASGMSSGAPM-------NSSTMGDNIYNNQDSGM 55
Query: 206 SSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEG 264
+ GL + +Q S+ E G + + +QL+ +P++ + ++I L +EG
Sbjct: 56 -----ISGLNQVQNQVHSIIQ---SNVTEEGASIENVCKQLRGVPERSVREAIEFLSSEG 107
Query: 265 LIYSTIDEFHYK 276
IYSTIDE HYK
Sbjct: 108 HIYSTIDEDHYK 119
>gi|403308386|ref|XP_003945231.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 32 kDa
subunit [Saimiri boliviensis boliviensis]
Length = 259
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 34/186 (18%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
+ SS + + + S GGF P Q+ +R+R +Q +VP T+ + A+ +
Sbjct: 82 YGSSNYGGAGGYTQSPGGFGSPGPSQA----EKKSRAR-AQHIVPCTISQLLSATLVDE- 135
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W T
Sbjct: 136 --VFRIGNVEISQVTIVGIIRHTEKAPTNIVYKIDDMTAPPMDVRQWVDTDVKT------ 187
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
KK +VAF + P+ + +E T H +E I H+ SK Q FP
Sbjct: 188 ----------------NKKSLVAFKIMPLEDMNEFTAHILEVINAHMILSKGSSQ-FPIL 230
Query: 179 QPQMVD 184
Q VD
Sbjct: 231 SRQAVD 236
>gi|429961492|gb|ELA41037.1| hypothetical protein VICG_01919 [Vittaforma corneae ATCC 50505]
Length = 225
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNF-MINGLEITNVT 74
GGF+ Q Q +Y + L ++ K I+ S S DD S+ +++ E++NV
Sbjct: 6 GGFL--QSSQKHEYTGV-------KTLRCLSNKQIN--SISTDDSSSVPIVDRFEVSNVQ 54
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQ 134
+ G V + ++ ++ F +DD TG++ C W + F+ + I++G ++L G++K F
Sbjct: 55 VCGYVTSFKKISTGFIFEVDDTTGKIECAFWTNGSFEELSADQIKEGALLKLTGSIKIFA 114
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHL 165
KK + ++ V + +T H C+Y HL
Sbjct: 115 SKKTLNVSTICTVDG-NALTYHLTSCLYQHL 144
>gi|448523340|ref|XP_003868878.1| Rfa2 DNA replication factor A [Candida orthopsilosis Co 90-125]
gi|380353218|emb|CCG25974.1| Rfa2 DNA replication factor A [Candida orthopsilosis]
Length = 289
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 12 AFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEIT 71
FS GF +Q S D S + + + PVT+K I EA D F ++ + I+
Sbjct: 46 GFSNSGF--TQGGFSGDGNSQQNKVQTRNSIAPVTIKQILEAEQPVPD-GEFKVHNVSIS 102
Query: 72 NVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQD----GMYVRLI 127
V +G+V + T++DG+G + ++W E ++ E E + YV +
Sbjct: 103 LVGFIGVVRKVHANGVTLFITVEDGSGSIDVRKWIDENNNSVEQEKEKYMGFLNKYVFVG 162
Query: 128 GNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSL 187
G LK + K I S+ + + +++ H++ I HL + QG S
Sbjct: 163 GALKVYNNNKSIQNASINLIEDSNQIIYHHLNAIDNHL-----KCQGVTKS--------- 208
Query: 188 NTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK 247
SG T N +++ VD +L++++Q S + E GV ++ + ++L
Sbjct: 209 --------SG-STTNGNDNNKLFVDDEGSATDRVLNFIRQESKTMPE-GVPISYIIQKLS 258
Query: 248 IPQKKIMDSIASLENEGLIYSTIDEFHY 275
I +K+ L G IY ++ Y
Sbjct: 259 ITEKEGEKHCNDLVESGKIYVGFNDGGY 286
>gi|403417909|emb|CCM04609.1| predicted protein [Fibroporia radiculosa]
Length = 361
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 38 DSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGT 97
+ + + PVT++ + EA + D + F I+G+++ V +V + + + ++ + L+DGT
Sbjct: 23 EHEAIRPVTIRQLLEAQRA-HDTAPFEIDGIDVDQVVVVAHLRDLRQTSTKLILRLEDGT 81
Query: 98 --GRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQ------GKKQIVAFSVRPVTN 149
G++ +W S V E E+ D YVR++G L F+ GK ++ + VT+
Sbjct: 82 SKGQITAHQWLSNVHQVFE-ESRPDQTYVRVVGRLSRFRGSQAQVGKNELRVIHLHEVTD 140
Query: 150 FDEVTCHYIEC 160
E H +E
Sbjct: 141 PHEPLFHILEA 151
>gi|226480512|emb|CAX73353.1| Replication protein A 32 kDa subunit [Schistosoma japonicum]
Length = 147
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Query: 1 MFSSSQFDASNAFS--GGGFMPSQPPQSADYPSSTARSRDSQG-LVPVTVKMISEASHSG 57
M+SS+ + + S GGG+M S S+ + + QG +VP T I A+ G
Sbjct: 1 MWSSNDYGGTTTMSDFGGGYMASAGA------SAGQKKINYQGTIVPCTCAEILAANQDG 54
Query: 58 DDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTR---E 114
D + GLE + +T+VG+V + E ++ V + +DD TG + ++ +E D+ +
Sbjct: 55 DKFVSPC--GLEFSQITVVGIVRSVNESSTRVEYEIDDYTGPYLPVKFFTEDQDSTSSIQ 112
Query: 115 MEAIQDGMYVRLIGNLKSFQGKKQIVAF 142
++ YVR+ G++++FQG K ++AF
Sbjct: 113 SRPFRELSYVRVHGHVRNFQGVKHVIAF 140
>gi|189189806|ref|XP_001931242.1| single-stranded DNA binding protein Ssb2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187972848|gb|EDU40347.1| single-stranded DNA binding protein Ssb2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 189
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 93 LDDGTGRVVCKRW----ASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
LDDGTG + K W +SE + + + ++ G Y R G LK F ++ + A +RP+
Sbjct: 8 LDDGTGSIEVKVWVDSDSSEQPNPTKAKLVE-GAYCRAWGKLKIFNDRRSVGATVIRPIE 66
Query: 149 NFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQ 208
+ +EV+ H +E HL ++ G ++ ++ + Y
Sbjct: 67 DMNEVSFHLLEATAVHLHFTRGPPGGARTAGANANGAAGQQQQKAAGGEY--------GG 118
Query: 209 FGVDGLKDCDQMILDYLQQ-PSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIY 267
+ + + + YL++ P S+E G++ +E++ +L I + L + GLIY
Sbjct: 119 YDLSKYGPVAKKVFQYLREAPQSNE---GLNQHEIAAKLGIDTADVAKGSDELLSAGLIY 175
Query: 268 STIDE 272
+T+D+
Sbjct: 176 TTVDD 180
>gi|299753378|ref|XP_002911865.1| hypothetical protein CC1G_13905 [Coprinopsis cinerea okayama7#130]
gi|298410273|gb|EFI28371.1| hypothetical protein CC1G_13905 [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 40 QGLVPVTVKMISEAS----HSGD-DKSNFMINGLEITNVTLVGLVYNKEERAS-DVNFTL 93
+G+ PVT +S A SGD +++ +++ +V +V +++ E+ ++ + +TL
Sbjct: 43 RGIRPVTCAHVSSAQPVTVRSGDKEETAYILGKKPFKHVDIVANIFDVEKASNGQIVYTL 102
Query: 94 DDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
D TG+V + WASE F R + YVR+ G L+++ + I +R + N EV
Sbjct: 103 SDETGQVKARAWASEYF--RYVNPSSHLEYVRVTGELETYNKRNSIRIKQIRVLENPHEV 160
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAP----TNLSSQF 209
H + +++ S + P Q ++ + A + + P T F
Sbjct: 161 YHHLLSILFYIQGRSLTATHTIPQGQSHTANNRVPKPASAQVPRNERPPPIDNTPEPPSF 220
Query: 210 GVDGLKDCDQ 219
V ++ D
Sbjct: 221 AVREAEEADH 230
>gi|123482304|ref|XP_001323747.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121906618|gb|EAY11524.1| hypothetical protein TVAG_005990 [Trichomonas vaginalis G3]
Length = 242
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 29/246 (11%)
Query: 37 RDSQGLVPVTVKMISEASHSGDDKSN-FMINGLEITNVTLVGLVYNKEER-ASDVNFTLD 94
R + ++PVT+K I A + K N FMING++ + ++G + + EE+ A+ + L+
Sbjct: 22 RTNVNIIPVTIKQILNA----EVKDNAFMINGVQAKVIRIIGKILSHEEQDATTDKYVLN 77
Query: 95 DGTGRVVCKRWASEVFDTREM-EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
D +G + A E D + E +D YV + G LK K + S+ +++ +
Sbjct: 78 DCSGTI----EAFESVDPSNVREPFEDNRYVAITGMLKFENDSKSLSIESIEYADDYNRI 133
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
T H ++ I+ HL +K GFP + + ++ N YQ + ++ +G
Sbjct: 134 TYHALDTIHAHLYFTKG---GFPQN---TIYTAQNREP------YQPNTAHADTKAASEG 181
Query: 214 LKDCDQMILDYLQ-QPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDE 272
D DQ IL ++ ++ + ++ L ++ + Q I I+ L +GLIY DE
Sbjct: 182 --DIDQGILSCMKSHGEGAQVTKSEIISALKDKFSVVQ--IEGRISKLNEDGLIYQA-DE 236
Query: 273 FHYKFA 278
Y A
Sbjct: 237 DTYSIA 242
>gi|283135230|ref|NP_001164370.1| replication protein A2 [Nasonia vitripennis]
Length = 253
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 30/278 (10%)
Query: 2 FSSSQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKS 61
S + FD S A GGFM + S A + Q VPV MI+ G+
Sbjct: 1 MSWNNFDNSTA-GEGGFMNTTVNDST-AGEDKANLKRGQNCVPV---MIAHLVRYGE--- 52
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEA-IQD 120
+ G + VT VGLV E ++ V+F D TG + +W D+ E+ ++
Sbjct: 53 KLTVWGTPVRLVTFVGLVRKVEPTSTKVSFEFSDDTGNISGLKWLEG--DSANYESPVKV 110
Query: 121 GMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQP 180
Y R+ G ++ ++ +++P+ + E+ H++E LQ
Sbjct: 111 NSYARVHGMIRDQGEDHYVLIVNIQPMDHLMELLSHHMEVTLMSLQGDS----------- 159
Query: 181 QMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVN 240
MV+ N G Q N S+ GL QM+LD ++ +S+ E G +
Sbjct: 160 -MVNKVANNDHSMGNQSVQNGSVNNSN--ANSGLNRQQQMVLDIIE---NSDPEFGAERD 213
Query: 241 ELSEQL--KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++ + +P + + + + L EG IY+T + ++K
Sbjct: 214 QIKSAVAPNVPPQMVDEILEFLFAEGHIYTTKTDDYFK 251
>gi|350409924|ref|XP_003488889.1| PREDICTED: replication protein A 32 kDa subunit-like [Bombus
impatiens]
Length = 246
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQ 134
+VGLV N EE + +++ ++D TG + +W T + +Q YVR++G L+
Sbjct: 63 IVGLVRNVEETTTKISYDIEDETGTITALKWLEMDKKTSDT-TMQINTYVRIVGFLREQT 121
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTG 194
K+ I+ + P+ +E+ H +E Y L + +M+ + T
Sbjct: 122 DKRHILILRMWPLQTLNELINHILEVTYVTL-------------KARMMAKDVTT----- 163
Query: 195 LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQK--- 251
L Q +L+ + G+ + ++ + + ++ E G+ +++ E K+P
Sbjct: 164 LEKEQDNKNDLNGEAAYYGMSEAQTLVYKIIH--AQNDTESGIERDKIKE--KVPNSLSG 219
Query: 252 ---KIMDSIASLENEGLIYSTIDEFHYK 276
+I+D ++S EG IY+T + ++K
Sbjct: 220 QVDEILDFLSS---EGHIYTTSSDDYFK 244
>gi|332025139|gb|EGI65319.1| Replication protein A 32 kDa subunit [Acromyrmex echinatior]
Length = 237
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 24/190 (12%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTL 75
GGFM + + ++ + +VPV +K I+ S +GD I G + +++
Sbjct: 11 GGFMNDSTQGTG---TGKKGPQNDKTIVPVLIKHIT--STTGD----LQIAGRTVNVLSI 61
Query: 76 VGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD-TREMEAIQDGM--YVRLIGNLKS 132
VG+V + E+ + ++F + D TG + F+ T M D M + + G +++
Sbjct: 62 VGIVRHIEQDTTKISFNIQDDTGVLFM------FFNLTIIMYNYNDKMQKILTIYGLIRT 115
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK-SQVQGFPSSQPQMVDSSLNTSA 191
++ ++ + P+ + +++TCH++E +Y L+ SK +Q PS+ MVD+++
Sbjct: 116 QNNQRHVLILRMYPLEDLNDLTCHFMEVMYVILKASKPTQETSLPSNNSLMVDNTM---- 171
Query: 192 RTGLSGYQTA 201
+G+S Q A
Sbjct: 172 -SGMSPEQVA 180
>gi|308466705|ref|XP_003095604.1| CRE-RPA-2 protein [Caenorhabditis remanei]
gi|308244603|gb|EFO88555.1| CRE-RPA-2 protein [Caenorhabditis remanei]
Length = 289
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 29/292 (9%)
Query: 1 MFSSSQFDASNAFSGGGFMPSQPPQSADY-PSSTARSRDSQGLVPVTVKMISEASHSGDD 59
M+S + D N G G+ + D P S A + + VPVT+ +++ S DD
Sbjct: 1 MWSDTTVDQGN---GNGWAAGESSFMTDRKPDSRATTLGDRLPVPVTISNLNQHFSSQDD 57
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKR---WASEVFDTREME 116
K ++I V VG V + + + + L D + + R + +E +
Sbjct: 58 K--YVIGNFRFATVLTVGTVKDIHQDGTTFTYELCDPSNESMEYRALKYENE-GSASDHS 114
Query: 117 AIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC----IYFHLQNS---K 169
AI +G VR IG LK F G I+ F++ PVT+ + T +E ++F S K
Sbjct: 115 AIVEGSRVRAIGKLKGFDGVNTIMLFNITPVTDDKDFTIFELEAEAARLFFQKNMSDKLK 174
Query: 170 SQV--QGF------PSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMI 221
S+V +GF P S+ ++S AP++ L+ + +
Sbjct: 175 SEVTSRGFQGMLAPPKSRGGQQQQGQSSSHNDNKERIYQAPSHQPQAAQEVTLR---ERV 231
Query: 222 LDYLQQPSSSERERGVHVNELSEQL-KIPQKKIMDSIASLENEGLIYSTIDE 272
LD L+ RE G ++ ++EQ+ + +K+ + L GL Y+T DE
Sbjct: 232 LDILRAVDGDAREEGSNIQWIAEQVNERDMEKMRQCLGDLVELGLAYTTTDE 283
>gi|402468639|gb|EJW03766.1| hypothetical protein EDEG_01961 [Edhazardia aedis USNM 41457]
Length = 234
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 115/268 (42%), Gaps = 44/268 (16%)
Query: 13 FSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITN 72
+ GGF+ S P + DY + + L +T+K + A+ +++ + ++ +++
Sbjct: 4 YDDGGFIHSSPKK--DYK------QQQRNLRSLTIKHLKTAN---IEQNPYQLDNSGLSH 52
Query: 73 VTLVGLVYN-KEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLK 131
+ L+G V N KE F L+D T + C W S + I + +R++GN++
Sbjct: 53 IQLIGFVSNVKEISGKGKGFDLNDNTDVISCTYWISSDHSSEVCGFISERNLLRVVGNIR 112
Query: 132 SFQGKKQIVAFSVRPVTNFDEVTCHYIECIY-FHLQNSKSQVQGFPSSQPQMVDSSLNTS 190
Q K ++ V + + +T HY+ CI+ F N++ + S + V
Sbjct: 113 VNQSKISFTVAMLKIVDDVNFMTFHYLNCIHQFLFYNNRLKRCDIKKSSKKFV------P 166
Query: 191 ARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQL--KI 248
G S Q+ ++ ++ + + G+H + + + L K
Sbjct: 167 MEAGFSRLQSDILDIYRKY----------------------QEDDGLHTDAVVKMLGGKY 204
Query: 249 PQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ +I D+I L ++ +YS I + HYK
Sbjct: 205 QESEIRDTIECLLSDCHLYS-ISDMHYK 231
>gi|123352518|ref|XP_001295395.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121874196|gb|EAX82465.1| hypothetical protein TVAG_097340 [Trichomonas vaginalis G3]
Length = 241
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
V++VG + + E+ +++ ++D TG + K + S+ E I DG YV ++G +
Sbjct: 58 VSIVGKIISHEDSTISIDYLVNDCTGSIKVKNFISD----DNPEPIPDGTYVFVVGRITP 113
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK 169
+ I +F+++P+T FD++ H + ++ HLQ ++
Sbjct: 114 -AIEDGISSFTIKPITEFDQIPYHMLYSLFVHLQTTR 149
>gi|440493484|gb|ELQ75949.1| Single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit [Trachipleistophora hominis]
Length = 226
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 17 GFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLV 76
GF+PS P DY + R+ +++K + D I+ ++ + +
Sbjct: 8 GFIPSSP--KPDYTPKSLRT--------LSIKQLKSLP---TDTPTHTIDNTTLSTICVA 54
Query: 77 GLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGK 136
G V + + S F LDDGT + W + +F+ + I+ ++R+IGN++ + G
Sbjct: 55 GWVRSTRQAQSGTIFLLDDGTAMINASFWPNGLFEEEQAGLIEPSNFLRVIGNVRVYDGD 114
Query: 137 KQIVAFSVRPVTNFDEVTCHYIECIYFHL 165
+ + + +F+ V+ H++ + HL
Sbjct: 115 ISVSVSFLTKIDDFNYVSYHFLNVLQQHL 143
>gi|410911352|ref|XP_003969154.1| PREDICTED: replication protein A 32 kDa subunit-like [Takifugu
rubripes]
Length = 251
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 37 RDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDG 96
R + ++PVTV + A G F+I LE+ V++VG+V ++V + +DD
Sbjct: 10 RATLQILPVTVSQLLSAPQVG--HGAFVIGYLELHQVSVVGVVRRSAHYDTNVQYCVDDM 67
Query: 97 TGR-VVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTC 155
TG ++ K+WA+ I G YV++ G L+ +K ++A +VR + +E+T
Sbjct: 68 TGPPLLVKQWAT---------PICPGTYVKVTGCLRGGSDQKVLLALNVRCLQELNEITS 118
Query: 156 HYIECIYFHLQ 166
H +E + H+Q
Sbjct: 119 HMMEVVQAHMQ 129
>gi|294949566|ref|XP_002786261.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900418|gb|EER18057.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 309
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 37/260 (14%)
Query: 42 LVPVTVKMISEA--SHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
L+PV V++ +A HSG D + + G V ++G + E +++TLDD TG
Sbjct: 60 LIPVNVRVFHDAVTQHSGGD--DIEVFGAAARVVEILGNARDVEHDGLAIHWTLDDFTGS 117
Query: 100 VVCKRWASEVFDT---REMEAIQDGM-------YVRLIGNLKSFQGKKQIVAFSVRPVTN 149
V CK + E T + E +++G YVR+IG ++ I A V PV +
Sbjct: 118 VRCKMYLEESDTTGRDKVNEILKNGKFHIHGQPYVRVIGAIRGGS-NPYISALKVLPVDD 176
Query: 150 FDEVTCHYIECIYFHLQNS-----------KSQVQGFPSSQPQMVDSSLNTSARTGLSGY 198
+E+ CH + ++ N+ + G + ++ ++ ++S + S
Sbjct: 177 LNEIPCHIAAIAHAYIANTGEIAPVSADGKRLSFGGISQAGVEVASANPSSSMPSPASEN 236
Query: 199 QTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK--IPQKKIMDS 256
Q+ N + D + +L++++ S S + G V E++ + + + +I
Sbjct: 237 QSGAANSHA--------DKREQLLEFIKVGSKST-DFGYSVGEMAAKFQGVLGTAEIRKL 287
Query: 257 IASLENEGLIYSTIDEFHYK 276
+ L ++GLIY DE HYK
Sbjct: 288 LGELSDDGLIYDAGDEDHYK 307
>gi|223946827|gb|ACN27497.1| unknown [Zea mays]
gi|413955646|gb|AFW88295.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 165
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 19/122 (15%)
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVF---------- 110
+ F+ G + LVG+V +++ R + F +DDGTG V C W + +
Sbjct: 28 TTFLRCGRRVARAELVGVVVSRDRREKFLRFLVDDGTGCVPCILWLNHQYLNARTSSGPS 87
Query: 111 ----DTREM-----EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
T EM E ++ G +R+ G + S++G QI V P + + H+++C+
Sbjct: 88 SDHDPTAEMALKMSEEVRLGTLLRVRGKIASYRGAIQITVRDVVPEKDPNSEVLHWLQCV 147
Query: 162 YF 163
Sbjct: 148 RL 149
>gi|119587398|gb|EAW66994.1| hCG2042180 [Homo sapiens]
Length = 128
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAIQDG 121
F I EI+ +TLVG++ + E+ ++++ + +DD T + +W + E +
Sbjct: 39 FKIGNAEISQITLVGIIRHAEKTSTNIVYKIDDMTAAPMNVHQWVDTDDTSSENTVVPPE 98
Query: 122 MYVRLIGNLKSFQGKKQIVAF 142
YV++ G+L+SFQ KK +VAF
Sbjct: 99 TYVKVAGHLRSFQNKKSLVAF 119
>gi|429964366|gb|ELA46364.1| hypothetical protein VCUG_02128 [Vavraia culicis 'floridensis']
Length = 284
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 17 GFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLV 76
GF+PS P DY + R+ +++K + D I+ ++ + +
Sbjct: 66 GFIPSSP--KPDYTPKSLRT--------LSIKQLKSLP---TDTPTHTIDNSTLSTICVA 112
Query: 77 GLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGK 136
G V + + S F LDDGT + W + +F+ + I+ ++R+IGN++ + G
Sbjct: 113 GWVRSTRQAQSGTIFVLDDGTAMINASFWPNGMFEEEQAGLIEPNNFLRVIGNVRVYDGD 172
Query: 137 KQIVAFSVRPVTNFDEVTCHYIECIYFHLQ 166
+ + + +F+ V+ H++ + HL
Sbjct: 173 ISVSVSFLTKIDDFNYVSYHFLNVLQQHLH 202
>gi|148698144|gb|EDL30091.1| replication protein A2, isoform CRA_b [Mus musculus]
Length = 152
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 2 FSSSQFDASNAF--SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDD 59
FSSS + + + S GGF P Q+ +R R +Q +VP T+ + A+ + +
Sbjct: 9 FSSSTYGGAGGYTQSPGGFGSPTPSQA----EKKSRVR-AQHIVPCTISQLLSATLTDE- 62
Query: 60 KSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV-CKRWASEVFDTREMEAI 118
F I +EI+ VT+VG++ + E+ +++ + +DD T + ++W + E +
Sbjct: 63 --VFRIGDVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAPPMDVRQWVDTDDASGENAVV 120
Query: 119 QDGMYVRLIGNLKSFQGK 136
YV++ G+L+SFQ K
Sbjct: 121 PPETYVKVAGHLRSFQVK 138
>gi|67590598|ref|XP_665492.1| replication protein A2; CpRPA2 [Cryptosporidium hominis TU502]
gi|54656206|gb|EAL35260.1| replication protein A2; CpRPA2 [Cryptosporidium hominis]
Length = 362
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 16 GGFMPSQPPQSADYPSSTARS-RDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGFM S + +S + Q L P+ V MI + + S F + +I
Sbjct: 22 GGFMIDGNDSSMQNGNERKQSVGNEQKLAPLKVGMILRSYSNFVTLSRFQLFDKDINLFK 81
Query: 75 LVGLVYNKE--ERASDVNFTLDDGTGRVVCKRWASEVFDTRE----MEAIQDGMYVRLIG 128
LVG V N E + + F LDDG+G ++ W + T+ + +I +G +V++ G
Sbjct: 82 LVGFVRNVEHDDYPQRLRFYLDDGSGLILID-WLVDNTGTKYKQDLVNSIHEGCFVKIFG 140
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSL 187
L + + AF VRP+ DE++ H I+ + +++ + S + Q+ DS++
Sbjct: 141 ELTLMVSEPSVRAFVVRPLVCTDEISLHDIDVASYIVRSMYGNT--YDSGKVQLSDSNV 197
>gi|32395677|gb|AAP37459.1| replication protein A2 [Cryptosporidium parvum]
Length = 362
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 16 GGFMPSQPPQSADYPSSTARS-RDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGFM S + +S + Q L P+ V MI + + S F + +I
Sbjct: 22 GGFMIDGNDSSMQNGNERKQSVGNEQKLAPLKVGMILRSYSNFVTLSRFQLFDKDINLFK 81
Query: 75 LVGLVYNKE--ERASDVNFTLDDGTGRVVCKRWASEVFDTRE----MEAIQDGMYVRLIG 128
LVG V N E + + F LDDG+G ++ W + T+ + +I +G +V++ G
Sbjct: 82 LVGFVRNVEHDDYPQRLRFYLDDGSGLILID-WLVDNTGTKYKQDLVNSIHEGCFVKIFG 140
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSL 187
L + + AF VRP+ DE++ H I+ + +++ + S + Q+ DS++
Sbjct: 141 ELTLMVSEPSVRAFVVRPLVCTDEISLHDIDVASYIVRSMYGNT--YDSGKVQLSDSNV 197
>gi|66358822|ref|XP_626589.1| RP-A, OB fold single strand binding protein [Cryptosporidium parvum
Iowa II]
gi|46227708|gb|EAK88628.1| RP-A, OB fold single strand binding protein [Cryptosporidium parvum
Iowa II]
Length = 362
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 16 GGFMPSQPPQSADYPSSTARS-RDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGFM S + +S + Q L P+ V MI + + S F + +I
Sbjct: 22 GGFMIDGNDSSMQNGNERKQSVGNEQKLAPLKVGMILRSYSNFVTLSRFQLFDKDINLFK 81
Query: 75 LVGLVYNKE--ERASDVNFTLDDGTGRVVCKRWASEVFDTRE----MEAIQDGMYVRLIG 128
LVG V N E + + F LDDG+G ++ W + T+ + +I +G +V++ G
Sbjct: 82 LVGFVRNVEHDDYPQRLRFYLDDGSGLILID-WLVDNTGTKYKQDLVNSIHEGCFVKIFG 140
Query: 129 NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSL 187
L + + AF VRP+ DE++ H I+ + +++ + S + Q+ DS++
Sbjct: 141 ELTLMVSEPSVRAFVVRPLVCTDEISLHDIDVASYIVRSMYGNT--YDSGKVQLSDSNV 197
>gi|387593702|gb|EIJ88726.1| hypothetical protein NEQG_01416 [Nematocida parisii ERTm3]
gi|387597362|gb|EIJ94982.1| hypothetical protein NEPG_00507 [Nematocida parisii ERTm1]
Length = 232
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 34 ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLV-YNKEERASDVNFT 92
+ +R SQ + +++K +++ + K N G ++ V L+G + + + FT
Sbjct: 7 SEARGSQFIRRMSIKHVNQVEFDEESKQNTQFRGQGVSLVELMGWITFENDSVHGGKKFT 66
Query: 93 LDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
L DGTG + C W D ++ I+ G Y+R++G+L + I P+T+ +
Sbjct: 67 LSDGTGSISCLLW-----DEKDSSHIKKGAYIRIVGSLSKHEQNISINCTITTPITDGNS 121
Query: 153 VTCHYI 158
V H +
Sbjct: 122 VMYHLL 127
>gi|403370718|gb|EJY85227.1| hypothetical protein OXYTRI_16916 [Oxytricha trifallax]
Length = 385
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 37 RDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDG 96
+ S+ PVT+KM+ ++ DD+ + +G I ++ +VG V + E F ++D
Sbjct: 50 KKSKVFTPVTLKMVQQSQPRPDDQCEY--DGDTINDIIIVGRVLKRIEEPMRTQFEINDN 107
Query: 97 TGR---VVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
T + + ++V + Y ++ GN++ F+ +K IV ++ + FDEV
Sbjct: 108 TCTFHVLFYHKGENQVPTALRNFNFEQFTYAKIYGNIRVFKEEKAIVGTHIKRIEKFDEV 167
Query: 154 TCHYI 158
T H++
Sbjct: 168 TNHFL 172
>gi|328716608|ref|XP_003245992.1| PREDICTED: replication factor A protein 2-like [Acyrthosiphon
pisum]
Length = 244
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 71 TNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNL 130
T+V +VG++ + F L TGR++C +W E +R + I++ Y +++G+
Sbjct: 48 THVVVVGII-----KQVKPLFILXXXTGRLLCIQWGDENELSRYPKLIENA-YFKVVGSK 101
Query: 131 KSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQV-----QGFPSSQPQMVDS 185
+ K ++ SVRP+ +E+T H + I + V Q ++Q + S
Sbjct: 102 RMQNDKVTLLCHSVRPLETLNELTHHLLSIIALPYITEEINVASGTQQSTATNQKDFLMS 161
Query: 186 SLNTSARTGLSGYQTAPTNLS---SQFGV-DGLKDCDQMILDYLQQPSSSERERGVHVNE 241
NT+ G+ NLS Q V +K C + E G +
Sbjct: 162 GDNTN------GFMDTTNNLSLNPRQLKVYTVIKRC--------------QDEAGYSALD 201
Query: 242 LSEQL--KIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
+ + L K+P +I ++ EG I+STIDE HYK
Sbjct: 202 IQKILPEKMPLSEIEKILSFFIEEGHIFSTIDENHYK 238
>gi|409082266|gb|EKM82624.1| hypothetical protein AGABI1DRAFT_125089 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 455
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 32 STARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNF 91
STARS + T++ I A+H ++ F IN E V LV VY+ ++F
Sbjct: 21 STARSDYLDAIQHTTIRQILTATHV---QTRFKINDKETGFVQLVANVYDTSYTGGKMDF 77
Query: 92 TLDDGTGRVVCKRWASEVFDT-REMEAIQD--GMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
LDDGTGR+ +W ++ D +E E + Y R+IG + + G + + V
Sbjct: 78 RLDDGTGRMKAMKW--DIIDEDKECEFAESIGFQYARVIGTIAEYCGMHYLKIMKIDLVD 135
Query: 149 NFDEVTCHYIECI--YFHLQNSKSQVQGFPS---SQPQMVDSSLNTSARTGLSGYQTAPT 203
+ E+ H ++ + + LQ +G PS ++P M + T+ L + +
Sbjct: 136 DPHEIYHHLLKVMVEFLMLQ------RGPPSHAVARPAMPATPNRTTEPFSLRALENSLP 189
Query: 204 NLSSQFGVDG 213
++ S G G
Sbjct: 190 SVVSHMGDHG 199
>gi|123188535|ref|XP_001281859.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121837613|gb|EAX68929.1| hypothetical protein TVAG_583010 [Trichomonas vaginalis G3]
Length = 186
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
V++V + + E+ +++ ++D TG + K + S+ E I DG YV ++G +
Sbjct: 3 VSIVEKIISHEDSTISIDYLVNDCTGSIKVKNFISD----DNPEPIPDGTYVFVVGRITP 58
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSK 169
+ I +F+++P+T FD++ H + ++ HLQ ++
Sbjct: 59 -AIEDGISSFTIKPITEFDQIPYHMLYSLFVHLQTTR 94
>gi|393238287|gb|EJD45825.1| hypothetical protein AURDEDRAFT_137173 [Auricularia delicata
TFB-10046 SS5]
Length = 231
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 21/164 (12%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKM--ISEASHSGDDKSNFMINGLEITN 72
GGGF+ P + AD PS + + + PVT++M +E++H F I+G ++ +
Sbjct: 20 GGGFV--SPSKGAD-PSGGPKKPTAPPVRPVTIRMPMTAESTHL---DGGFKIDGEKLES 73
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS 132
V + ER ++ C+ E + E E + DG YVR+IG LK
Sbjct: 74 VRGGAVA---RERGGEM---------ETRCQVDNQEA-NMPEDEEVVDGGYVRVIGKLKE 120
Query: 133 FQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFP 176
F GK+ + ++R V + E+ H ++ I +L + V P
Sbjct: 121 FSGKRSLHGSTLRLVVDHHEIYAHTLDVIATYLLYANRAVPDTP 164
>gi|209882741|ref|XP_002142806.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209558412|gb|EEA08457.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 351
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVY--NKEERASDVNFTLDDGT 97
Q L P+ V MI ++ S + EI LVG V EE V F LDDG+
Sbjct: 47 QRLAPLKVGMILKSYSGFITNSRLQLLNREINLFKLVGFVRCAEHEEYPQRVRFYLDDGS 106
Query: 98 GRVVCKRWASEV---FDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVT 154
G ++ + + +I +G +V++ G L + + AF VRP+ DE++
Sbjct: 107 GLILIDWLIDNTGTNYKQELINSITEGCFVKVYGELTLMVSEPSVRAFVVRPLVCTDEIS 166
Query: 155 CHYIECIYF 163
H I+ F
Sbjct: 167 AHDIDVAVF 175
>gi|413937899|gb|AFW72450.1| hypothetical protein ZEAMMB73_145941 [Zea mays]
Length = 98
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 220 MILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFHYKFAR 279
++L PS ++E G+H+ ++ ++LK+P + +I + G IY+TID+FHYK R
Sbjct: 37 LVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYKSVR 96
>gi|399218729|emb|CCF75616.1| unnamed protein product [Babesia microti strain RI]
Length = 280
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 43/274 (15%)
Query: 12 AFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEIT 71
G GF+ + P + D+ S+ + +P+ + MI+ S D I G ++
Sbjct: 27 GIEGSGFISNDP--NEDFDKSSLEPSNKINFMPLKIGMINSTWKS--DSRYIQIFGNQVE 82
Query: 72 NVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD---TREMEAIQDGM-YVRLI 127
+ +VG + N + + + ++D TGR++C ++ F T++++ +++G V++
Sbjct: 83 IIKIVGRIVNVQWTDQNNQYLIEDDTGRIMCILVRADEFSEYRTKQLKDLENGHKLVKIY 142
Query: 128 GNLKSFQGKKQ--IVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDS 185
G + I +S++ + NF+E H ++ ++ L+ F Q + +
Sbjct: 143 GGYNPINSTQYPVISIYSIKCIQNFNESLLHDLDVMHTILK----VFLLFMKKNSQRMKN 198
Query: 186 SLNTSARTG-LSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSE 244
N S G LS Y +++ D+++ S + G +V+E++
Sbjct: 199 EDNRSNYIGSLSSY------------------IAKLLSDHVK---SGKGRNGFNVSEITR 237
Query: 245 QLK-------IPQKKIMDSIASLENEGLIYSTID 271
Q + + + +M + LE E +Y TID
Sbjct: 238 QCQLCPEFQNVTENHVMTCLKELEQEARVYQTID 271
>gi|17508391|ref|NP_491446.1| Protein RPA-2 [Caenorhabditis elegans]
gi|351050106|emb|CCD64225.1| Protein RPA-2 [Caenorhabditis elegans]
Length = 288
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 8 DASNAFSGG--GFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMI 65
+A N ++ G FM + P S A + + VPVT+ + E + DDK +++
Sbjct: 10 NAGNGWAAGESSFMTDRKPDSK------ATTLGERLPVPVTISNLIEHFSAQDDK--YVV 61
Query: 66 NGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD----TREMEAIQDG 121
V VG+V + + + + L D + R + +D T + +I +G
Sbjct: 62 GTFRFATVLTVGIVKDISQDGTTYTYDLCDPNNTEMEYR--TLKYDNEGSTFDHSSIVEG 119
Query: 122 MYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC----IYFHLQNSKSQVQ---- 173
VR IG LK F G I+ F++ PV + + T +E ++F +N +++
Sbjct: 120 TRVRAIGKLKGFDGNNTIMLFNITPVEDDKDFTIFELEAEAARLFFQ-KNVSEKLKSVDS 178
Query: 174 -GF------PSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQ 226
GF P S+ + + T Y ++ D L++ +L +
Sbjct: 179 DGFQGMLAPPKSRMSQTSHQSSQGSDTKERLYAQPQKVMTGANQGDVLRERITAVL--MA 236
Query: 227 QPSSSERERGVHVNELSEQLKIPQKKIM-DSIASLENEGLIYSTIDE 272
P S R+ G HV+ ++EQ++ I+ + + GL+Y+T+DE
Sbjct: 237 VPEGS-RDEGRHVSWIAEQIQETNISIVRKCVGEMVENGLVYTTVDE 282
>gi|226495337|ref|NP_001151468.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|195646980|gb|ACG42958.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 164
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 61 SNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVF---------- 110
+ F+ G + LVG+V +++ R + F +DDGTG V C W + +
Sbjct: 28 TTFLRCGRRVARAELVGVVVSRDRREKFLRFLVDDGTGCVPCILWLNHQYLNARTSSGPS 87
Query: 111 ----DTREM-----EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
T EM E ++ G +R+ G + S++G QI V P +V H+++C+
Sbjct: 88 SDHDPTAEMALKMSEEVRLGTLLRVRGKIASYRGAIQITVRDVVPNDPNSDVL-HWLQCV 146
Query: 162 YF 163
Sbjct: 147 RL 148
>gi|321472834|gb|EFX83803.1| hypothetical protein DAPPUDRAFT_239719 [Daphnia pulex]
Length = 208
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 95/211 (45%), Gaps = 40/211 (18%)
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWAS--EVFDTREMEAIQDGMYVRLIGNL 130
+TLVG + E + + +++ + D TG + W D+ + +GM+ R++G+
Sbjct: 27 ITLVGTIEKIESKINCISYMIRDDTGEIEVLLWVDIGSAIDSHNTK-FSNGMFCRVVGSP 85
Query: 131 KSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYF-----HLQNSKSQVQGFPSSQPQMVDS 185
K G ++A ++ +++ +E+T H +E + L+N+K+ S+ Q+ S
Sbjct: 86 KVTDGITHLIALNISKLSSANEITTHLLETQWIRMKLRQLKNNKA------SNDSQLPKS 139
Query: 186 SLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQ 245
+ + + L T ++ G+ ++ ER G
Sbjct: 140 DITLAPQQRL--IYTIVKAETNDIGI--------------EKAVVVERVHG--------- 174
Query: 246 LKIPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++PQ+++ + + L EGLI++T+D H+K
Sbjct: 175 -ELPQREVDNILDYLCTEGLIFNTVDVDHFK 204
>gi|290979135|ref|XP_002672290.1| hypothetical protein NAEGRDRAFT_81289 [Naegleria gruberi]
gi|284085865|gb|EFC39546.1| hypothetical protein NAEGRDRAFT_81289 [Naegleria gruberi]
Length = 253
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMIN----GLEI 70
GG + + + +S+ + + G+ PV ++ + A + ++F+I+ I
Sbjct: 13 GGEDVDQSMVHNTSHVNSSESASEKGGITPVNIRQLIHAEMP--ETNHFVIDCKTKKKRI 70
Query: 71 TNVTLVGLV--YNKEERASDVNFTLDDGTGRVVCKRWASEVFDT-REMEA----IQDGMY 123
VTLV + + E +N LDDGTGR+ +A DT ++ EA I++G++
Sbjct: 71 EQVTLVAQIVKFTNEPEKRKLNLFLDDGTGRMSVILYA---IDTEKKFEACGGVIENGLF 127
Query: 124 VRLIG--NLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG--FPSSQ 179
+R+ G N+ + G + IV + + + +E T H ++ I L + + G P Q
Sbjct: 128 LRIYGILNIDNRTGTRYIVGTGLSLIMDINEFTTHLLDVIVASLHSQYGSLVGKKVPKVQ 187
Query: 180 PQ 181
Q
Sbjct: 188 QQ 189
>gi|344244081|gb|EGW00185.1| Replication protein A 30 kDa subunit [Cricetulus griseus]
Length = 333
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 25 QSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEE 84
Q P +T +VP + + A + + F I G + V++VG++ ++
Sbjct: 98 QDLGLPMTTLTRPGIHSIVPCCISQLLTAV---EVDNVFKIRGFALHRVSIVGMIMEAKK 154
Query: 85 RASDVNFTLDDGTGRVVCKRWASEVFDTRE-MEAIQDGMYVRLIGNLKSFQGKKQIVAFS 143
+ + + +DD T + + R R+ + + G+Y +++G L+S +G +++ S
Sbjct: 155 ASRYMMYKIDDMTAKAIEARQPLSRERVRQCVIPLPVGVYAKVLGVLQSSEGTRRLGVLS 214
Query: 144 VRPVTNFDEVTCHYIECIYFHLQNSKSQ 171
+R + + +E++ H +E + H+ +S+
Sbjct: 215 IRVLEDMNELSTHTLEVVNAHMMLDQSR 242
>gi|269860373|ref|XP_002649908.1| single-stranded DNA-binding replication protein A 30 kD subunit
[Enterocytozoon bieneusi H348]
gi|220066668|gb|EED44142.1| single-stranded DNA-binding replication protein A 30 kD subunit
[Enterocytozoon bieneusi H348]
Length = 218
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 15 GGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVT 74
G + + Q + P T RS + L +T +I D +N +T ++
Sbjct: 9 GNDLIDASGIQERNIPKRTLRSMTIKQLFQITGGII--------DNTN-------VTTIS 53
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQ 134
+VG V + + +NF L D T + W + +D +++I +G V++IG L+ F
Sbjct: 54 IVGFVRELTKTNTGLNFKLFDTTEIIDINFWPNGNYDESLIDSIHEGYIVKIIGTLRLFN 113
Query: 135 GKKQIVAFSVRPVTNFDEVTCHYIECIY 162
KK IV +V V + + + H I Y
Sbjct: 114 DKK-IVVCNVFKVVDGNYLIYHLINAAY 140
>gi|67467186|ref|XP_649713.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56466205|gb|EAL44327.1| hypothetical protein EHI_147000 [Entamoeba histolytica HM-1:IMSS]
gi|407042005|gb|EKE41068.1| OB-fold nucleic acid binding domain containing protein [Entamoeba
nuttalli P19]
gi|449701972|gb|EMD42689.1| OBfold nucleic acid binding domain containing protein [Entamoeba
histolytica KU27]
Length = 149
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 15/149 (10%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
+ GGF S P ++ + S + P+T +S ++K F + + V
Sbjct: 10 TTGGFTQSSPRKNTENKSV---------VFPLTA--LSFIHTESNNKKQFTYKQVVLNTV 58
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
+ G + N + + +T++D TG VV + D+ E E I+ G Y++ +G +K F
Sbjct: 59 VVCGRITNIDIQNDVKRYTINDSTGSVVVGVYQ---IDSTE-ENIEVGQYIKCVGKIKKF 114
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIY 162
+ I+A + V + + + H IEC Y
Sbjct: 115 SQETYILASRLPLVVDVNHMMTHLIECAY 143
>gi|403159168|ref|XP_003319819.2| hypothetical protein PGTG_01993 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166617|gb|EFP75400.2| hypothetical protein PGTG_01993 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 154
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 23 PP--QSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVY 80
PP +++ P T R Q L PVT+K + +A S D S I +++TNV+ G+V
Sbjct: 47 PPFLHNSNTPGGTGRV--DQALQPVTIKQVLDAEASNSD-SAISIQDIDVTNVSFCGVVR 103
Query: 81 NKEERASDVNFTLDDGTGRVVCKRW 105
+ A++V + DGTG + ++W
Sbjct: 104 DIVRNATNVLLQVGDGTGGIEARKW 128
>gi|123164202|ref|XP_001279149.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121827937|gb|EAX66219.1| hypothetical protein TVAG_569160 [Trichomonas vaginalis G3]
Length = 175
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 89 VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
+++ ++D TG + K + S+ E I DG YV ++G + + I +F+++P+T
Sbjct: 5 IDYLVNDCTGSIKVKNFISD----DNPEPIPDGTYVFVVGRITP-AIEDGISSFTIKPIT 59
Query: 149 NFDEVTCHYIECIYFHLQNSK 169
FD++ H + ++ HLQ ++
Sbjct: 60 EFDQIPYHMLYSLFVHLQTTR 80
>gi|431896048|gb|ELK05466.1| Replication protein A 32 kDa subunit [Pteropus alecto]
Length = 331
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQG----FPSS 178
YV++ G+L SFQ K ++AF + P+ + +E T H +E + H+ SK+ Q P S
Sbjct: 24 YVKMAGHLSSFQNNKSLIAFKIMPLEDMNEFTAHILEVVNAHMTLSKANSQPSAGRAPIS 83
Query: 179 QPQM 182
P M
Sbjct: 84 NPGM 87
>gi|307108432|gb|EFN56672.1| hypothetical protein CHLNCDRAFT_144539 [Chlorella variabilis]
Length = 279
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 45 VTVKMISEASHSGDDKSNFMINGLEITN------VTLVGLVYNKEERASDVNFTLDDGTG 98
VTV + A H + ++G + T+ V +VG + R S ++ TL+DGTG
Sbjct: 76 VTVGQLHNA-HQACGSAALWLDGHDFTDPFSAGAVEVVGKLVRVRMRVSVLDVTLEDGTG 134
Query: 99 RVVCKRWAS-EVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
R+ KRW S D E + G Y RL +VA + + VT H+
Sbjct: 135 RITAKRWESGTALD--EPAGWEVGAYYRLGLTFNFVPELSPLVAAAWK-------VTTHF 185
Query: 158 IECIYFHL 165
+ I+ HL
Sbjct: 186 LRAIFEHL 193
>gi|255965904|gb|ACU45240.1| unknown [Karlodinium veneficum]
Length = 156
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 138 QIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSG 197
I A S+RPVT DEV+ H IE + L + + + P +S A T
Sbjct: 22 HISAMSLRPVTGADEVSYHTIEVAHVALTFKRGGSRAPERTSPTQPAAS---QADTQSQD 78
Query: 198 YQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK----IPQKKI 253
+ +PT ++ L+ +++L+ L++ S+ E GV + +SEQ+K I +K+
Sbjct: 79 VKPSPTPATNAAPTKSLR---EIVLEVLKREGESKAE-GVPLAVVSEQVKGSTAIEVQKM 134
Query: 254 MDSIASLENEGLIYSTIDEFHY 275
++ L N G Y+TID+ H+
Sbjct: 135 LE---ELVNHGEAYNTIDDLHF 153
>gi|242035657|ref|XP_002465223.1| hypothetical protein SORBIDRAFT_01g034490 [Sorghum bicolor]
gi|241919077|gb|EER92221.1| hypothetical protein SORBIDRAFT_01g034490 [Sorghum bicolor]
Length = 164
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW-------------ASEV 109
F+ G + LVG+V +++ R + F +DDGTG V C W SE
Sbjct: 30 FLRCGRTVARAELVGIVVSRDRREKFLRFVIDDGTGCVPCILWLNHQYLNASTSSGLSES 89
Query: 110 FDTREM-----EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYF 163
T E+ E ++ G +R+ G + +++G QI V + + H+++C+
Sbjct: 90 DPTAEIALKMSEEVRLGTLLRVRGKITTYRGAIQITVRDVVVEKDPNSEVLHWLQCVRL 148
>gi|294463299|gb|ADE77185.1| unknown [Picea sitchensis]
Length = 185
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 18/122 (14%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD----------- 111
F G + V +VG+V ++E + + F LDDG+G V C W + + +
Sbjct: 42 FWRKGRPVRKVEMVGVVVSRERKDKFLKFELDDGSGCVPCILWLNHMTNRYYPKTDQLQM 101
Query: 112 -------TREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFH 164
++ E +Q G VR+ G + + + QI S + + H++ECI
Sbjct: 102 ESMAAMALKQAEQVQLGRLVRVQGRITLYNKQLQITVSSAVVEKDPNAEILHWMECIRLA 161
Query: 165 LQ 166
++
Sbjct: 162 VR 163
>gi|167380559|ref|XP_001735369.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902679|gb|EDR28436.1| hypothetical protein EDI_350300 [Entamoeba dispar SAW760]
Length = 149
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 14 SGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNV 73
+ GGF S P ++ + + + P+T +S ++K F + + V
Sbjct: 10 TTGGFTQSSPRKNVE---------NKNVVFPLTA--LSFIHTESNNKKQFTYKQVVLNTV 58
Query: 74 TLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSF 133
+ G + + + + +T++D TG VV + + D+ E E I+ G Y++ +G +K F
Sbjct: 59 VVCGRITSIDIQNDVKRYTINDSTGSVVVGVYQT---DSTE-ENIEVGQYIKCVGKIKKF 114
Query: 134 QGKKQIVAFSVRPVTNFDEVTCHYIECIY 162
+ I+A + V + + + H IEC Y
Sbjct: 115 SQETYILASRLPLVVDVNHMMTHLIECAY 143
>gi|119600787|gb|EAW80381.1| hCG1811392 [Homo sapiens]
Length = 140
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 98 GRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
G + +W + E I YV + G+L+ Q KK +V F + P+ + +E T H
Sbjct: 28 GLLTPSQWVDTDDTSSENTVIPPEKYVIVAGDLRPLQDKKSLVPFKIMPLEDMNEFTVHI 87
Query: 158 IECIYFHLQNSKSQVQ 173
+E I H+ SK+ Q
Sbjct: 88 LEVINVHMILSKANRQ 103
>gi|84995920|ref|XP_952682.1| hypothetical protein [Theileria annulata]
gi|65302843|emb|CAI74950.1| hypothetical protein TA11650 [Theileria annulata]
Length = 308
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 114/263 (43%), Gaps = 40/263 (15%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+ +P+ + MI + +G N + G ++ + L+G V +E D +F +DDGTG
Sbjct: 54 KTFMPLKINMIYSSWKTGGVSIN--VYGYQLDIIKLIGYVKEAKETDQDTSFLIDDGTGT 111
Query: 100 VVC------------KRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPV 147
+ C + + SE+ T+ I G N I+ +S++ V
Sbjct: 112 IECIHLSPGDISDWKRNYISELTRTKSAVKIYGGF------NPLYSSSSPTIIIYSIKEV 165
Query: 148 TNFDEVTCHYIEC-------IYFHLQNSKSQVQGFPSSQP-QMVDSSLNTSARTGLSGYQ 199
T+ +E+ H ++ + + S ++ F S P Q D+SL+ T + Y
Sbjct: 166 TSPEEIKLHNLDIDGKRNPNVMDTIGEMDSILKEFDISIPKQQPDNSLDNILST-TTDY- 223
Query: 200 TAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-------IPQKK 252
+PT+ +++ V+ L + I L S + G+H++E++ + + + ++
Sbjct: 224 -SPTS-TAKIPVNELA-LTKFISSMLANESRNNNYNGLHISEITRRCRQQHSFQSVQEQN 280
Query: 253 IMDSIASLENEGLIYSTIDEFHY 275
I + LE + ++ T+D Y
Sbjct: 281 IRKILKDLERDATVFQTLDSNTY 303
>gi|449016743|dbj|BAM80145.1| similar to replication protein A 30kDa [Cyanidioschyzon merolae
strain 10D]
Length = 297
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 41/302 (13%)
Query: 7 FDASN---AFSGGGFMPSQPPQSADYPS------STARSRDSQ-GLVPVTVKMISEASHS 56
D SN A+ GGGF+P P ++ S S + RD + L+PV V + A H
Sbjct: 1 MDYSNTYGAYGGGGFLPESPARTGGNASTRFGVGSGSSLRDQRRSLLPVRVADLVHAVHD 60
Query: 57 G--------DDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASE 108
D+ + I E + V +V V E+ D+ + LDD +G ++ R AS
Sbjct: 61 PVTNTFVLRDENEHQSITISEGSIVKVVAYVEELREQPLDLLWLLDDRSGEMIWARMAST 120
Query: 109 VFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNS 168
+ Q G+ VR+ G L G++ + ++R E+ H C LQ
Sbjct: 121 SSSSLAALE-QSGILVRVFGQLLEVDGRRVLNVRAIRKADGEVELRYHENLCQLSKLQ-- 177
Query: 169 KSQVQGFPSSQPQMVD-SSLNTSARTGLSGY-------QTAPTNLSSQFGVDGLKDCDQM 220
++G+P++ + SS S + G S AP ++ Q GL+
Sbjct: 178 --LIRGYPTAGNALAGASSSPASPKAGPSKAVHRSSLGSGAPKEMAQQ--APGLEIPAAF 233
Query: 221 ------ILDYLQQPSSSERERGVHVNELSEQLKIPQKKIMDSIASLENEGLIYSTIDEFH 274
+L +++ ++ R R + ++++++ + K+ +L+NEG IY T+D+
Sbjct: 234 PPEHFKVLKCIREETA--RNRDAMLTDIAQRIALSTTKVRGICDALQNEGHIYCTLDDDT 291
Query: 275 YK 276
++
Sbjct: 292 FR 293
>gi|71029898|ref|XP_764591.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351547|gb|EAN32308.1| hypothetical protein TP02_0022 [Theileria parva]
Length = 314
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
+P+ + MI + +G N G + + LVG V + +E D +F +DDGTG +
Sbjct: 56 FMPLKINMIYSSWKTGGVSINVF--GYHLDIIKLVGYVKDAKETEQDTSFVIDDGTGTIE 113
Query: 102 CKRWA-SEVFDTRE---MEAIQDGMYVRLIGNLKSF--QGKKQIVAFSVRPVTNFDEVTC 155
C + ++ D + E + V++ G I+ +S++ VT+ +E+
Sbjct: 114 CIHLSPGDISDWKRSYISELTRTKSPVKIYGGFNPLYSSSSPTIIIYSIKEVTSPEEIKL 173
Query: 156 HYIECIY 162
H ++ IY
Sbjct: 174 HNLDVIY 180
>gi|397582836|gb|EJK52437.1| hypothetical protein THAOC_28285 [Thalassiosira oceanica]
Length = 541
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 234 ERGVHVNELSEQLKIPQKKIMD---SIASLENEGLIYSTIDEFHYKFA 278
E G H++++ QL MD +IA L NEG IYSTIDE HYKFA
Sbjct: 493 ELGKHIDDIVGQLSKKGYSEMDVRNAIAYLSNEGHIYSTIDEDHYKFA 540
>gi|112253335|gb|ABI14255.1| single-stranded DNA-binding replication protein A [Pfiesteria
piscicida]
Length = 283
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 23/168 (13%)
Query: 27 ADYPSSTARSRDSQGLVPVTVKMISEA----SHSGDDKSNFMINGLEITNVTLVGLVYNK 82
A P+ R ++ +PVT++ + A + SG++ + F G+E + +V V +
Sbjct: 20 ASPPAKKQRPEENFTCLPVTLRQMEAALAKRAGSGEELTFF---GVEPKELIVVAAVESI 76
Query: 83 EERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAF 142
+ + + T++DGTGR+ + + ++ + + I G Y+ G L++ V F
Sbjct: 77 ARQGTSLEMTINDGTGRLKARYFVTDA-QPDDSDRIVPGRYISAFGGLRA----APAVHF 131
Query: 143 SV---RPVTNFDEVTCHYIECIYFHL-------QNSKSQVQG-FPSSQ 179
++ R V + DEV+ H IE + L + +KS+V G F S Q
Sbjct: 132 AINGLRLVESVDEVSYHVIEVAHAALRLQVGAKEAAKSEVAGTFQSPQ 179
>gi|428171360|gb|EKX40278.1| hypothetical protein GUITHDRAFT_142987 [Guillardia theta CCMP2712]
Length = 350
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 79/201 (39%), Gaps = 29/201 (14%)
Query: 42 LVPVTVKMISEA-------------------SHSGDDKSNFMINGLE--ITNVTLVGLVY 80
+VPVT M+ A + G + M+ G I+ V L+G V
Sbjct: 28 MVPVTASMVHSAYSRMVTKHGLVCAADGELPARRGSEGVGIMVVGRNRVISRVRLLGDVV 87
Query: 81 NKEERASDVNFTLDDGTGRVVCKRWASEVFDT-REMEAIQDGMYVRLIGNLKSFQGKKQI 139
++R + V F LDD + + C W S+ E ++ G ++ + G L ++G+ Q+
Sbjct: 88 AVKDRDNFVEFKLDDSSDIITCILWKSDAMKPGLGYEGVKLGKHLHVGGKLSQYRGEVQL 147
Query: 140 VAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQ 199
+ N D ++ +++ + HL N S+ + P + R+ +
Sbjct: 148 SVWFASIEENVDAMSYFWVKMVDLHL-NHYSKANTLCNEIPDLATDLEQPQVRSKRGKFS 206
Query: 200 TAPTNLSSQFGVDGLKDCDQM 220
SS+ G CD+M
Sbjct: 207 ------SSELGQQRSAACDEM 221
>gi|440794453|gb|ELR15614.1| OBfold nucleic acid binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 201
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 58 DDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFD-TREME 116
D F +NG +T V ++G++ R + ++DDGTGR+ C +A+ V +
Sbjct: 77 DATEPFNLNGHPVTRVAVMGIIVEALPRPRHLALSVDDGTGRIQCAYYANSVDEGGVPYS 136
Query: 117 AIQDGMYVRLIGNLKSFQGKKQIVAFSV 144
+Q G + G L F+ ++ I + +
Sbjct: 137 DLQVGCLASIQGKLHHFRQQRSIAIYRI 164
>gi|326428258|gb|EGD73828.1| hypothetical protein PTSG_12335 [Salpingoeca sp. ATCC 50818]
Length = 350
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
L PV ++ EA D N I ++ + LVG V + A + D TG +
Sbjct: 44 LTPVVARLCHEAEILAHD--NVTIRSTPMSLLRLVGCVQDIVSVAMFTMMDVADHTGVIS 101
Query: 102 CKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
C+ W R + ++Q G YV ++G + + V PVT+F+++T H + +
Sbjct: 102 CRSW-------RPLPSLQ-GAYVCIVGRIVGNADTRIFDLQHVAPVTDFNQITYHLLSTV 153
Query: 162 Y 162
+
Sbjct: 154 F 154
>gi|218192901|gb|EEC75328.1| hypothetical protein OsI_11709 [Oryza sativa Indica Group]
Length = 327
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 19/121 (15%)
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVF----------- 110
+F G +T +VG+V +++ R + F +DDGTG V C W + +
Sbjct: 195 SFARCGRTVTRAEIVGVVVSRDRREKFLRFLVDDGTGCVPCVLWLNHHYLSAASSSFRAS 254
Query: 111 ---DTREM-----EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY 162
T EM E + G +R+ G + + G QI V + + H+++CI
Sbjct: 255 DSDPTAEMALRMSEVVSLGTLLRVRGRIVLYHGAIQIAVRDVVLEKDPNVEVMHWLQCIC 314
Query: 163 F 163
Sbjct: 315 M 315
>gi|270268677|gb|ACZ65880.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268679|gb|ACZ65881.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268681|gb|ACZ65882.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268683|gb|ACZ65883.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268685|gb|ACZ65884.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268687|gb|ACZ65885.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268691|gb|ACZ65887.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268693|gb|ACZ65888.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268695|gb|ACZ65889.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268697|gb|ACZ65890.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268699|gb|ACZ65891.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268701|gb|ACZ65892.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268703|gb|ACZ65893.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268705|gb|ACZ65894.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268707|gb|ACZ65895.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268709|gb|ACZ65896.1| putative replication protein A middle subunit [Nasonia vitripennis]
Length = 185
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 23/193 (11%)
Query: 34 ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTL 93
A + Q VPV MI+ G+ + G + VT VGLV E ++ V+F
Sbjct: 15 ANLKRGQNCVPV---MIAHLVRYGEK---LTVWGTPVRLVTFVGLVRKVEPTSTKVSFEF 68
Query: 94 DDGTGRVVCKRWASEVFDTREMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
D TG + +W D+ E+ ++ Y R+ G ++ ++ +++P+ + E
Sbjct: 69 SDDTGNISGLKWLEG--DSANYESPVKVNSYARVHGMIRDQGEDHYVLIVNIQPMDHLME 126
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD 212
+ H++E LQ MV+ N G Q N S+
Sbjct: 127 LLSHHMEVTLMSLQGDS------------MVNKVANNDHSMGNQSVQNGSVNNSN--ANS 172
Query: 213 GLKDCDQMILDYL 225
GL QM+LD +
Sbjct: 173 GLNRQQQMVLDII 185
>gi|400180216|gb|AFP73237.1| CST complex subunit STN1-like protein [Carica papaya]
Length = 154
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 54 SHSGDDKSNFMINGLEITNVTLVGLVYNKEERASD-VNFTLDDGTGRVVCKRWASEVFDT 112
SHS +F G+ I+ V +G V +++ + S + F LDDGTG + C W +++
Sbjct: 25 SHS----KSFTRKGIPISRVESLGTVVSRDLKPSRFLKFKLDDGTGCIACILWLNQLSSN 80
Query: 113 RE--------------MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYI 158
+ E I+ G R+ G + ++G+ QI + + + H++
Sbjct: 81 QNPSTVRLIAQVANHLAEEIKMGRVARVRGRVTGYRGRIQITVSDIVIERDPNAQILHWL 140
Query: 159 ECIYF 163
ECI
Sbjct: 141 ECIRL 145
>gi|168016881|ref|XP_001760977.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687986|gb|EDQ74366.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 19/116 (16%)
Query: 67 GLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWAS-------------EVFDTR 113
G + V ++G+V + + + FTLDDGTG V C W + E+ +
Sbjct: 1 GRSVRQVEVMGIVVTVDRKERYLRFTLDDGTGCVPCIFWTNYASFPATSPAKGLELRSRQ 60
Query: 114 EM------EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYF 163
EM + ++ G +R+ G L ++ + Q+ S+R + + H++EC+
Sbjct: 61 EMAIATTAKQVKLGDLLRVQGRLNTYTNQIQVTVASLRTEKDPNAEVLHWVECMRL 116
>gi|270268689|gb|ACZ65886.1| putative replication protein A middle subunit [Nasonia vitripennis]
gi|270268711|gb|ACZ65897.1| putative replication protein A middle subunit [Nasonia vitripennis]
Length = 185
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 34 ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTL 93
A + Q VPV MI+ G+ + G + VT VGLV E ++ V+F
Sbjct: 15 ANLKRGQNCVPV---MIAHLVRYGEK---LTVWGTPVRLVTFVGLVRKVEPTSTKVSFEF 68
Query: 94 DDGTGRVVCKRWASEVFDTREMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
D TG + +W D+ E+ ++ Y R+ G ++ ++ +++P+ + E
Sbjct: 69 SDDTGNISGLKWLEG--DSANYESPVKVNSYARVHGMIRDQGEDHYVLIVNIQPMDHLME 126
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVD 212
+ H++E LQ MV+ N G Q N S+
Sbjct: 127 LLSHHMEVTLMSLQGDS------------MVNKVANNDHSMGNQSVQNGSVNNSNANS-- 172
Query: 213 GLKDCDQMILD 223
GL QM+LD
Sbjct: 173 GLNRQQQMVLD 183
>gi|270268747|gb|ACZ65915.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268749|gb|ACZ65916.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268751|gb|ACZ65917.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268753|gb|ACZ65918.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268755|gb|ACZ65919.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268757|gb|ACZ65920.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268759|gb|ACZ65921.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268761|gb|ACZ65922.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268763|gb|ACZ65923.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268765|gb|ACZ65924.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268767|gb|ACZ65925.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268769|gb|ACZ65926.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268771|gb|ACZ65927.1| putative replication protein A middle subunit [Nasonia giraulti]
gi|270268773|gb|ACZ65928.1| putative replication protein A middle subunit [Nasonia giraulti]
Length = 185
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 34 ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTL 93
A + Q VPV MI+ G+ + G + VT +GLV E ++ V+F L
Sbjct: 15 ANLKRGQNCVPV---MIAHLVRYGEK---LTVWGSPVRLVTFLGLVRKIEPTSTKVSFEL 68
Query: 94 DDGTGRVVCKRWASEVFDTREMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
D TG + +W D+ E+ ++ Y R+ G ++ ++ +++P+ + E
Sbjct: 69 SDDTGNISGLKWLEG--DSANYESPVKVNSYARVHGMIRDQGEDHYVLILNIQPMDHLME 126
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSL------NTSARTGLSGYQ 199
+ H++E LQ S V ++ M + S+ N++A +GL+ Q
Sbjct: 127 LLSHHMEVTLMSLQ-GDSMVNKVANNDHSMGNQSVKNGSVNNSNANSGLNRQQ 178
>gi|357112231|ref|XP_003557913.1| PREDICTED: CST complex subunit STN1-like [Brachypodium distachyon]
Length = 159
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 18/120 (15%)
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVF----------- 110
+F G + +VG+V +++ R + F +DDGTG V C W + +
Sbjct: 28 SFAHRGRIVARAEVVGVVVSRDRREKFLRFLIDDGTGCVPCVLWLNHQYLNANSSSGTLD 87
Query: 111 --DTREM-----EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYF 163
T EM E + G +R+ G + ++G QI V + + H+++C++
Sbjct: 88 TDPTGEMALQMSEVVHLGTLLRVRGRIVMYRGAMQIAVRDVILEKDPNVELLHWLQCVHM 147
>gi|405960440|gb|EKC26365.1| Replication protein A 32 kDa subunit [Crassostrea gigas]
Length = 125
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 211 VDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYST 269
+ GL + +Q S+ E G + + +QL+ +P++ + ++I L +EG IYST
Sbjct: 58 ISGLNQVQNQVHSIIQ---SNVTEEGASIENVCKQLRGVPERSVREAIEFLSSEGHIYST 114
Query: 270 IDEFHYK 276
IDE HYK
Sbjct: 115 IDEDHYK 121
>gi|326431143|gb|EGD76713.1| hypothetical protein PTSG_12677 [Salpingoeca sp. ATCC 50818]
Length = 167
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 66 NGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVR 125
NG + L G+V ++ V + +DDGT V C W + + ++ G +V
Sbjct: 62 NGRHVRLAMLAGIVTEVDKGTHFVAYKVDDGTAEVPCIVWRRDESERHARFNLELGCHVL 121
Query: 126 LIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
G + F+GK+Q+ + +T +E H+ E +
Sbjct: 122 AWGAVTVFRGKRQLTTHGISEITAVEEAV-HWAEAM 156
>gi|409096331|ref|ZP_11216355.1| OB-fold nucleic acid binding domain-containing protein
[Thermococcus zilligii AN1]
Length = 669
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEV--FDTREMEAIQDGMYVRLIGNL 130
V + G + + + S++ T+DDGTGR+V +S V D ++++ G+ VR+ G +
Sbjct: 376 VVIEGNIVDVAQVGSNLKLTVDDGTGRIVVFIPSSAVLELDNTTRDSLKKGLGVRIGGYV 435
Query: 131 KSFQGKKQIVAFSVRPVTNFDE 152
+ +QG ++V ++ + + + E
Sbjct: 436 EEYQGTLEVVPYTGKAILAYGE 457
>gi|270268713|gb|ACZ65898.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268715|gb|ACZ65899.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268717|gb|ACZ65900.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268719|gb|ACZ65901.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268721|gb|ACZ65902.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268723|gb|ACZ65903.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268725|gb|ACZ65904.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268727|gb|ACZ65905.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268729|gb|ACZ65906.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268731|gb|ACZ65907.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268733|gb|ACZ65908.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268735|gb|ACZ65909.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268737|gb|ACZ65910.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268739|gb|ACZ65911.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268741|gb|ACZ65912.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268743|gb|ACZ65913.1| putative replication protein A middle subunit [Nasonia longicornis]
gi|270268745|gb|ACZ65914.1| putative replication protein A middle subunit [Nasonia longicornis]
Length = 185
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 34 ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTL 93
A + Q VPV MI+ G+ + G + VT +GLV E ++ ++F L
Sbjct: 15 ANLKRGQNCVPV---MIAHLVRYGEK---LTVWGTPVRLVTFLGLVRKIEPTSTKISFEL 68
Query: 94 DDGTGRVVCKRWASEVFDTREMEA-IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDE 152
D TG + +W D+ E+ ++ Y R+ G ++ ++ +++P+ + E
Sbjct: 69 SDDTGNISGLKWLEG--DSANYESPVKVNSYARVHGMIRDQGEDHYVLIVNIQPMDHLME 126
Query: 153 VTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSL------NTSARTGLSGYQ 199
+ H++E LQ S V ++ M + S+ N++A +GL+ Q
Sbjct: 127 LLSHHMEVTLMSLQ-GDSMVNKVANNDHSMGNQSVKNGSVNNSNANSGLNRQQ 178
>gi|209881913|ref|XP_002142394.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
gi|209558000|gb|EEA08045.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
Length = 346
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 52/264 (19%)
Query: 43 VPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVC 102
VP T+K+I E+ + +F++ G+ +++VT+VG + +K+ S + F + DGTG +
Sbjct: 101 VPSTIKIILESLEKSPN--SFILYGIRVSSVTIVGWIIHKQMYNSRMIFRIADGTGGIDA 158
Query: 103 KRWASEVFDTRE-----MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY 157
R + T E ++ +++GM +R++G + +G T Y
Sbjct: 159 -RIDIDTETTGEELINYLDTLKEGMIIRIVGQVIPGKGD-----------------TSSY 200
Query: 158 IECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSG---YQTAPTNL---SSQFGV 211
I C + S+ F + V + L + G + Y N+ + +
Sbjct: 201 ISCYTAIKVENPSEYAYFHPVEVSFVANELCNESNIGYNNNDFYVLNTPNIDFRENTLNI 260
Query: 212 DGLKDCDQM----ILDYLQQ-------------PSSSERERGVHVNELSEQLK--IPQKK 252
L D + I D +QQ S E+ G+H + + +QL+ K
Sbjct: 261 LNLDSNDIIVPSDITDKIQQQVYKVVAYSIKQMKSEEEKATGIHRDVIIKQLRSQYEPTK 320
Query: 253 IMDSIASLENE-GLIYSTIDEFHY 275
++ +I LE++ +IY +ID HY
Sbjct: 321 VITAINDLESKSAVIYESIDG-HY 343
>gi|115453161|ref|NP_001050181.1| Os03g0366900 [Oryza sativa Japonica Group]
gi|108708339|gb|ABF96134.1| OB-fold nucleic acid binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113548652|dbj|BAF12095.1| Os03g0366900 [Oryza sativa Japonica Group]
gi|215701028|dbj|BAG92452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624978|gb|EEE59110.1| hypothetical protein OsJ_10972 [Oryza sativa Japonica Group]
Length = 160
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 62 NFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVF----------- 110
+F G +T +VG+V +++ R + F +DDGTG V C W + +
Sbjct: 28 SFARCGRTVTRAEIVGVVVSRDRREKFLRFLVDDGTGCVPCVLWLNHHYLNAASSSSRAS 87
Query: 111 ---DTREM-----EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
T EM E + G +R+ G + ++G QI V + + H+++CI
Sbjct: 88 DSDPTAEMALRMSEVVSLGTLLRVRGRIVLYRGAIQIAVRDVVLEKDPNVEVMHWLQCI 146
>gi|156086514|ref|XP_001610666.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797919|gb|EDO07098.1| hypothetical protein BBOV_IV007430 [Babesia bovis]
Length = 280
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 23 PPQSADYPSSTARSRD------SQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLV 76
PP+ A + +STA+ S L+P+ + + D+ F++ + ++ L+
Sbjct: 43 PPEIAAFQASTAQKTTKKYTGLSDALLPIKISQVLRCV--SDENLKFVLYNNPVGSICLI 100
Query: 77 GLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNL 130
G N ++ AS + FTL D TGR+ +F I DG +V+++G +
Sbjct: 101 GKATNIDKLASAIQFTLVDETGRIAVHYNYEGIF-------INDGDHVQVVGTV 147
>gi|18390729|ref|NP_563781.1| CST complex subunit STN1 [Arabidopsis thaliana]
gi|75335200|sp|Q9LMK5.1|STN1_ARATH RecName: Full=CST complex subunit STN1; AltName: Full=Suppressor of
cdc thirteen homolog; Short=AtSTN1
gi|8954034|gb|AAF82208.1|AC067971_16 F10K1.17 [Arabidopsis thaliana]
gi|21554324|gb|AAM63429.1| unknown [Arabidopsis thaliana]
gi|26452561|dbj|BAC43365.1| unknown protein [Arabidopsis thaliana]
gi|28827422|gb|AAO50555.1| unknown protein [Arabidopsis thaliana]
gi|332189958|gb|AEE28079.1| CST complex subunit STN1 [Arabidopsis thaliana]
Length = 160
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 50 ISEASHSGDDKSNF-MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASE 108
I + S + ++F ++ G ++ V +VG + +++ + F +DDGTG V C W ++
Sbjct: 17 IQRLTQSPTESNSFSLLGGACVSRVEIVGTIVSRDLTPKFLKFGVDDGTGCVTCVMWLNQ 76
Query: 109 VFDT------------------REMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNF 150
+ + ++ I+ G R+ G + S++G QI A +
Sbjct: 77 LTSSYFSRWDPATILLLASAARKQAAQIRIGAVARVRGRVGSYRGVMQITANVAVAERDP 136
Query: 151 DEVTCHYIECIYFHLQNSKSQVQ 173
+ H++EC+ + ++Q
Sbjct: 137 NAEILHWLECLKLGQSCYRVRIQ 159
>gi|261328121|emb|CBH11098.1| replication Factor A 28 kDa subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 155
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 27/156 (17%)
Query: 123 YVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHL---QNSKSQVQGFPSSQ 179
YVR G +K +Q IV +VR V++ +E+ H+++ I HL Q S+ P++
Sbjct: 15 YVRAAGTVKMWQNSP-IVTGTVRLVSDCNELNYHFLDVILTHLRLTQGSRRPNSAAPAAV 73
Query: 180 PQMVDSSLNTSARTGLSGYQTAPTNLSSQF-GVDGLKDCDQMILDYLQQPSSSERERGVH 238
P NT++ G + + F G DG ++++ ++Q + E G+
Sbjct: 74 P-------NTASAVG----------VQNMFPGGDGKVFTTDVVINTIRQKARG--EEGLS 114
Query: 239 VNELSE---QLKIPQKKIMDSIASLENEGLIYSTID 271
++E+S Q + + ++I +L EG IY T D
Sbjct: 115 MDEISAAALQYGFSGQDVRNAIRTLMEEGKIYQTHD 150
>gi|401401389|ref|XP_003880999.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325115411|emb|CBZ50966.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 390
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 2 FSSSQFDASNAFSGGGFMPSQ-PPQSADYPS--STARSRDSQGLVPVTVKMISEASH--- 55
FSS F+ F+ +PSQ QS PS TA S ++GLV VTV M+ A+
Sbjct: 36 FSSQPFEE---FASPSLLPSQQTKQSRASPSFQGTAAS-GAEGLVYVTVGMLHRAAREMR 91
Query: 56 -----SGDDKSNFMINGLEITNVTLVGLVY--NKEERASDVNFTLDDGTGRV 100
+ +K F ++G ++ V L G V E+ AS V F L+DGTG+V
Sbjct: 92 EGGEETKSEKKAFRLHGNDVGLVGLRGWVAPPGCEKLASLVRFKLEDGTGQV 143
>gi|297843504|ref|XP_002889633.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297335475|gb|EFH65892.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 158
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 19/133 (14%)
Query: 50 ISEASHSGDDKSNF-MINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASE 108
I + S + ++F ++ G ++ V VG + +++ + F +DDGTG V C W ++
Sbjct: 17 IQRLTQSPTESNSFSLLGGACVSRVETVGTIISRDLTPKFLKFGVDDGTGCVTCVLWLNQ 76
Query: 109 VFDT------------------REMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNF 150
+ + ++ I+ G R+ G + S++G QI A V +
Sbjct: 77 LTSSYFSRWHPDTILLLASAARKQAAEIRIGSVARVRGRVGSYRGVMQITATVVVVERDP 136
Query: 151 DEVTCHYIECIYF 163
+ H++EC+
Sbjct: 137 NAEILHWLECLRL 149
>gi|255567532|ref|XP_002524745.1| conserved hypothetical protein [Ricinus communis]
gi|223535929|gb|EEF37588.1| conserved hypothetical protein [Ricinus communis]
Length = 166
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 75 LVGLVYNKEERASD-VNFTLDDGTGRVVCKRWASEV----FDTREMEA------------ 117
++G+V + E + + FT+DDGTG V C W +++ F R A
Sbjct: 46 ILGIVTSCEHKPHKFLKFTIDDGTGCVSCILWLNQLTSPYFSRRSTPAVRLIASTATHFA 105
Query: 118 --IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
I+ G+ R+ G + S++G QI A V + + H+++C+
Sbjct: 106 SLIKIGVVARVRGRITSYRGTVQITASDVVIERDPNAEIFHWLQCV 151
>gi|402591641|gb|EJW85570.1| hypothetical protein WUBG_03519 [Wuchereria bancrofti]
Length = 303
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 31/187 (16%)
Query: 116 EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKS----- 170
+A+ +G V ++G L+SF + IVAF VR + + E+ ++E L +K
Sbjct: 117 DAVVEGTDVSVVGKLRSFNERLCIVAFDVREIEDKREIDAFHLEARLARLFYTKDVLDIA 176
Query: 171 --------------QVQGFPSSQPQMVD---SSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
+V Q +M + S++ ++ + S Q + S G
Sbjct: 177 LSKKWIALSADTMLRVNETDGGQTKMTNDWKSNIGSNLKANTSLMQQNASRSISDSDCRG 236
Query: 214 LKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQK-----KIMDSIASLENEGLIYS 268
L I YL+ S+ + G ++++ + IP+ K + I L +EGLIY+
Sbjct: 237 LTGQKAEIFKYLR--SNGDPIIGASIDDI--RTGIPRNHFNSSKFAEDIEYLASEGLIYA 292
Query: 269 TIDEFHY 275
T D+ HY
Sbjct: 293 TSDDDHY 299
>gi|449505865|ref|XP_004174912.1| PREDICTED: CST complex subunit STN1 [Taeniopygia guttata]
Length = 314
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 27/122 (22%)
Query: 47 VKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWA 106
+K I+E S F NG I V +VG+V +ER + N+ +DD TG + C W
Sbjct: 31 IKDITEMRESIQVPGVFFYNGHPIRQVDVVGIVVQTKERDAFYNYGVDDSTGVINCVCWK 90
Query: 107 SEVFDTREMEA---------------------------IQDGMYVRLIGNLKSFQGKKQI 139
+ + T + A ++ G VR+ G++++++ K++I
Sbjct: 91 NPMCLTPSLLAGHPSTPSSLSVFEQLKKLQETVSQRTKVEIGDVVRVRGHIRTYRQKREI 150
Query: 140 VA 141
A
Sbjct: 151 QA 152
>gi|403353556|gb|EJY76316.1| hypothetical protein OXYTRI_02177 [Oxytricha trifallax]
Length = 313
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 102/238 (42%), Gaps = 18/238 (7%)
Query: 43 VPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVC 102
+PVT K + + DD ++NG ++ + ++G + E + ++D T
Sbjct: 62 IPVTCKQLRQMPVDMDDIC--LMNGDQVQEIVIIGRTMSCREDSMRFTLEINDSTEIFKV 119
Query: 103 KRWASEVFDTREME--AIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIEC 160
+ + F + Q+ +YV++ G ++ ++ +K I+ ++ + DE+T H ++
Sbjct: 120 VFFQKDPFQSPFPADFKFQENIYVKIFGTIRVYKEEKAIIGSYIKNLVKSDEITNHLLQV 179
Query: 161 IYFHLQNSKSQVQGFPSS--------QPQMVDSSLNTSARTGLSGYQT-APTNLSSQFGV 211
K ++ F S Q Q + NT+++ ++ + L G
Sbjct: 180 FCSEQLRQKGVLKDFTQSSQQSPLIKQKQTMQGDHNTNSKANCQNRKSLTQSKLDPLVGK 239
Query: 212 DG-LKDCDQMILDYLQQPSSSERERGVHVNELSEQL--KIPQKKIMDSIASLENEGLI 266
D K+ IL+ + + S+ RE +H +++ + L + K I + +L GLI
Sbjct: 240 DKYFKEISNQILELMLEMRSACRE--MHKDDIIQVLDRQFQPKDIKQGMRTLVENGLI 295
>gi|170577884|ref|XP_001894175.1| hypothetical protein [Brugia malayi]
gi|158599341|gb|EDP36986.1| conserved hypothetical protein [Brugia malayi]
Length = 302
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 34/188 (18%)
Query: 116 EAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGF 175
+A+ +G + ++G L+SF + IVAF VR + + E+ ++E L +K +
Sbjct: 117 DAVVEGTDISVVGKLRSFSERLCIVAFDVREIEDKREIDAFHLEARLARLFYAKDVLD-- 174
Query: 176 PSSQPQMVDSSLNTSARTG-LSGYQTAPT-----NLSSQF-----------------GVD 212
+ + + S +T R G QT T N+ S G
Sbjct: 175 IALSEKWIALSADTMLRVNETDGGQTKTTSDWKSNIKSNLKSSSLMQQSSSRSIPDSGCR 234
Query: 213 GLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKIPQK-----KIMDSIASLENEGLIY 267
GL I YL+ S+ + G ++++ + IP+ K + I L +EGLIY
Sbjct: 235 GLTGQKAEIFKYLR--SNGDPVIGASIDDI--RTGIPKNHFNSSKFAEDIEYLASEGLIY 290
Query: 268 STIDEFHY 275
+T D+ HY
Sbjct: 291 ATSDDDHY 298
>gi|390597897|gb|EIN07296.1| hypothetical protein PUNSTDRAFT_114758 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 364
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 40 QGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+G+ PVT+ + A +D + F I EI +V +V V + + + + L+DGTGR
Sbjct: 32 RGVRPVTIYQLKRAEKRSED-AKFTIENHEIHHVCVVAHVVSIDTETGENVYMLEDGTGR 90
Query: 100 VVCKRWASEVFDTRE----MEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPV 147
+ +++ ++ T + + + G + R+IG LK ++ K + VRP
Sbjct: 91 IKGRQYEEDIEGTVDDPDGLCGVARGTFARVIGILKLWKIFKTLQVLHVRPA 142
>gi|66357610|ref|XP_625983.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46227238|gb|EAK88188.1| hypothetical protein cgd5_190 [Cryptosporidium parvum Iowa II]
Length = 346
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 57/277 (20%)
Query: 37 RDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDG 96
R + +PV + MI ++ S S F + I++VTLVG + ++E AS + F + DG
Sbjct: 86 RIQRMCLPVNISMILKSLESS--PSVFKMFERRISSVTLVGWITHREILASRMIFRVSDG 143
Query: 97 TGRVVCKRWASEVFDTRE----------MEAIQDGMYVRLIGNLKSFQGKKQIVAF-SVR 145
TG + + FD ++ +++G VRL+G + GK I + S
Sbjct: 144 TGGIDAR------FDIDSETLGDEINSYLDNLREGTIVRLVGQV--VPGKGDISTYISCY 195
Query: 146 PVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSAR--TGLSGYQTAPT 203
V +E+ E Y+H F + +++++ LN T LS Y +
Sbjct: 196 TVLKIEEMG----EYAYYHSIEVAYVTNQF---EQEIMENELNIKEENNTYLSPYTISTN 248
Query: 204 N------LSSQFGVDGLKDCD----------QMI---LDYLQQPSSSERERGVHVNELSE 244
N ++ F +D +KD + Q++ L Y SE ++ + +N+
Sbjct: 249 NSNTNELMNEDFNLDLIKDINVPDDITNKTHQIVYKTLSYEIMNLKSEEKKSLGINK-DH 307
Query: 245 QLKIPQ-----KKIMDSIASLENE-GLIYSTIDEFHY 275
+KI + I+ +I+ LE++ +IY T+D HY
Sbjct: 308 IIKILRPYYEPSTILSTISDLESKYAVIYETMDN-HY 343
>gi|449275577|gb|EMC84390.1| Oligonucleotide/oligosaccharide-binding fold-containing protein 1
[Columba livia]
Length = 378
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 47 VKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWA 106
+K I E S F NG + V +VG+V ++ER + N+ +DD TG + C W
Sbjct: 31 IKDIKEMRESKQVPGIFFYNGHPVRQVDVVGIVVQRKERDAFFNYGVDDSTGVINCVCWK 90
Query: 107 S 107
+
Sbjct: 91 N 91
>gi|403221612|dbj|BAM39744.1| uncharacterized protein TOT_020000017 [Theileria orientalis strain
Shintoku]
Length = 314
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 16/136 (11%)
Query: 42 LVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVV 101
+P+ + MI + +G N + G ++ + LVG + + + D F +DDGTG +
Sbjct: 56 FMPLKINMIYSSWKTGGSSINIL--GYQLDIIKLVGRIVDAKTTEQDTTFVIDDGTGSID 113
Query: 102 C--------KRWASEVFDTREMEAIQDGMYVRLIGNLKSF--QGKKQIVAFSVRPVTNFD 151
C W + + Q V++ G I+ +S++ +++ +
Sbjct: 114 CIHLFPGDMTEWKTNYVNNLMKTKSQ----VKVYGGFNPLYSSSNPTIIIYSIKELSSPE 169
Query: 152 EVTCHYIECIYFHLQN 167
E H ++ IY L N
Sbjct: 170 ESKLHDLDVIYSILSN 185
>gi|196007402|ref|XP_002113567.1| predicted protein [Trichoplax adhaerens]
gi|190583971|gb|EDV24041.1| predicted protein [Trichoplax adhaerens]
Length = 328
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLK- 131
VT+VG + + R + + +DDG+ R+ CK+W + F T + G V++ G +
Sbjct: 35 VTIVGDIARVDTRKRFIAYDVDDGSDRITCKQWKKKNFITAPL-----GALVQITGQAQL 89
Query: 132 SFQGKKQIVAFSVRPVTNFDEV-TCHYIECIYFH 164
+ GK +I+ + TNF V H+ + +H
Sbjct: 90 LYSGKIEILIVQMIDKTNFPMVEILHWTLSLEYH 123
>gi|397638025|gb|EJK72901.1| hypothetical protein THAOC_05521 [Thalassiosira oceanica]
Length = 435
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 218 DQMILDYLQQPSSSERERGVHVNEL---SEQLKIPQKKIMDSIASLENEGLIYSTIDEFH 274
D +++D L+ P+ G+HVN++ + Q + I ++ +L NE IYST+DE H
Sbjct: 373 DAIVIDVLRNPNIPLE--GMHVNDIVGQASQEGFSEVVIRSAMTNLVNEWRIYSTVDEDH 430
Query: 275 YKFA 278
Y++A
Sbjct: 431 YQYA 434
>gi|345565861|gb|EGX48809.1| hypothetical protein AOL_s00079g448 [Arthrobotrys oligospora ATCC
24927]
Length = 158
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 23 PPQSADY-PSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYN 81
PP+ D SST +S + +T ++S S S D +S + NG I +++VG V +
Sbjct: 3 PPRRRDVNKSSTYKSWMKLYICDITASLVS-LSPSFDSESTYSFNGHPIRWISIVGTVTS 61
Query: 82 KEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQI 139
+E + F++DDG+G+ + + +++M + + R G L+ + Q+
Sbjct: 62 IDEHEKKILFSIDDGSGQCINAVARKDSMTSKDMPRLHSTVKAR--GELELYHDAWQL 117
>gi|440299316|gb|ELP91884.1| hypothetical protein EIN_398140 [Entamoeba invadens IP1]
Length = 146
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 19/151 (12%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLV-PVTVKMISEASHSGDDKSNFMINGLEITNVT 74
GGF+PS P A+ + ++ +V P+T + + + ++K F+ +TNV
Sbjct: 8 GGFIPSSP----------AKKQPAKNVVFPLTC--LEFLNTTTNNKKEFLYENNILTNVV 55
Query: 75 LVGLVYNKEERASDVNFTLDDGTGRVVCKRWASE--VFDTREMEAIQDGMYVRLIGNLKS 132
+ G V + + +DD TGR+ + + F + + + G Y+ G +K
Sbjct: 56 VCGEVVEAKTENEIAKYLIDDSTGRIEVGIYGEDEPTFSAKPL-INRVGDYIITSGKIKK 114
Query: 133 FQGKKQIVAFSVRPV-TNFDEVTCHYIECIY 162
F + S R + ++ D + H IEC Y
Sbjct: 115 FSSSNYV--HSQRTIKSDLDHMMLHLIECAY 143
>gi|393212752|gb|EJC98251.1| hypothetical protein FOMMEDRAFT_97039 [Fomitiporia mediterranea
MF3/22]
Length = 603
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 41 GLVPVTVKMISEASHSGDDKSNFMING-LEITNVTLVGLVYNKEERASDVNFTLDDGTGR 99
+ PV VK + E H G+D F G + V +VG+V +E + F +DDGT
Sbjct: 84 AVAPVRVKHVFEMDHEGNDNEEFYWMGRVPCRTVKIVGMVVGVDEFDDMLRFKVDDGTSV 143
Query: 100 VVC 102
+ C
Sbjct: 144 IDC 146
>gi|2498848|sp|Q23697.1|RFA2_CRIFA RecName: Full=Replication protein A 28 kDa subunit; Short=RP-A p28;
AltName: Full=Replication factor A protein 2; Short=RF-A
protein 2
gi|410432|emb|CAA80683.1| 28 kilodalton subunit of replication protein A [Crithidia
fasciculata]
Length = 258
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEE----------RASDVNFTL 93
P+T+K + EA G E+T T+VG V E A + +
Sbjct: 32 PLTIKQMLEAQSVGGGVMVVDGR--EVTQATVVGRVVGYENANMASGGGAITAKHFGYRI 89
Query: 94 DDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
D TG +V ++W + R E I +VR G + +Q + IV +V + + +E+
Sbjct: 90 TDNTGMIVVRQW---IDADRAQEPIPLNTHVRASGTVNVWQ-QSPIVTGTVVSMADSNEM 145
Query: 154 TCHYIECIYFHLQ 166
H ++ I HL+
Sbjct: 146 NYHMLDAILTHLR 158
>gi|401418127|ref|XP_003873555.1| putative replication Factor A 28 kDa subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489786|emb|CBZ25046.1| putative replication Factor A 28 kDa subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 257
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 51/276 (18%)
Query: 9 ASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGL 68
AS+ SGG Q PQ +P + P+T+K + EA G
Sbjct: 15 ASSNSSGG-----QQPQRRMHP-----------IRPLTIKQMLEAQSVGGGVLVVDGR-- 56
Query: 69 EITNVTLVGLVYNKEE----------RASDVNFTLDDGTGRVVCKRWASEVFDTREMEAI 118
E+T T+VG V E A + + D TG +V ++W + R E +
Sbjct: 57 EVTQATVVGRVVGYENANMASGGGAITAKHFGYRITDNTGMLVVRQW---IDADRMQEPL 113
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
VR G + +Q + IV +V + + +E+ H ++ I HL+ ++ + PSS
Sbjct: 114 PLNTQVRASGTVNVWQ-QTPIVTGTVVSMADSNEMNYHMLDAILTHLRLTQGNKRA-PSS 171
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
S NT++ G+ + P G D +++ +++Q SS G+
Sbjct: 172 GV----SIQNTASAVGM--HNMLP-------GGDNKVLLTDLLVSFIKQHGSS--GAGMS 216
Query: 239 VNELS---EQLKIPQKKIMDSIASLENEGLIYSTID 271
++EL+ ++ + ++ +L EG +Y T D
Sbjct: 217 MDELTMSAQRYGFTHGDVRTAMRTLAAEGKVYQTHD 252
>gi|157866780|ref|XP_001681945.1| putative replication Factor A 28 kDa subunit [Leishmania major
strain Friedlin]
gi|68125396|emb|CAJ03255.1| putative replication Factor A 28 kDa subunit [Leishmania major
strain Friedlin]
Length = 257
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 35/241 (14%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEE----------RASDVNFTL 93
P+T+K + EA G E+T T+VG V E A + +
Sbjct: 34 PLTIKQMLEAQSVGGGVLVVDGR--EVTQATVVGRVVGYENANMASGGGAITAKHFGYRI 91
Query: 94 DDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEV 153
D TG +V ++W + R E + +VR G + +Q + IV +V + + +E+
Sbjct: 92 TDNTGMLVVRQW---IDADRMQEPLAINTHVRASGTVNVWQ-QTPIVTGTVVSMADSNEM 147
Query: 154 TCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDG 213
H ++ I H + ++ + PSS S NT++ G+ + P G D
Sbjct: 148 NYHMLDAILTHFRLTQGNKRA-PSSGV----SIQNTASAVGM--HNMLP-------GGDN 193
Query: 214 LKDCDQMILDYLQQPSSSERERGVHVNELS---EQLKIPQKKIMDSIASLENEGLIYSTI 270
+++ +++Q SS G+ ++EL+ ++ + ++ +L EG +Y T
Sbjct: 194 KVLLTDLLVSFIKQHGSS--GAGMSMDELTTSAQRYGFTHGDVRTAMRTLAAEGKVYQTH 251
Query: 271 D 271
D
Sbjct: 252 D 252
>gi|166217452|sp|Q1JEV4.1|DPO3_STRPD RecName: Full=DNA polymerase III PolC-type; Short=PolIII
gi|94544757|gb|ABF34805.1| DNA polymerase III alpha subunit [Streptococcus pyogenes MGAS10270]
Length = 1465
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKS--FQGKKQIVAFSVRPVTNFD--EVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
+R+ GN+++ F + V+ + + D ++ + + FH + S + P+
Sbjct: 300 LRVQGNIETNPFTKSLTMNVQQVKEIVHHDRKDLMPEGQKRVEFHAHTNMSTMDALPT-- 357
Query: 180 PQMVDSSLNTSARTG 194
V+S ++T+A+ G
Sbjct: 358 ---VESLIDTAAKWG 369
>gi|357237598|ref|ZP_09124939.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus ictaluri 707-05]
gi|356753788|gb|EHI70891.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus ictaluri 707-05]
Length = 1465
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + D R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDDLRKYDMIAKGAW 299
Query: 124 VRLIGNLKS--FQGKKQIVAFSVRPVTNFD--EVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
+R+ GN+++ F + V+ + + D ++ + + FH + S + P+
Sbjct: 300 LRVQGNIENNPFTKSLTMNVQQVKEIVHHDRKDLMPEGQKRVEFHAHTNMSTMDALPT-- 357
Query: 180 PQMVDSSLNTSARTG 194
V++ ++T+A+ G
Sbjct: 358 ---VETLIDTAAKWG 369
>gi|392330591|ref|ZP_10275206.1| DNA polymerase III PolC [Streptococcus canis FSL Z3-227]
gi|391418270|gb|EIQ81082.1| DNA polymerase III PolC [Streptococcus canis FSL Z3-227]
Length = 1465
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E +A+ +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENQIVFEGMVFDVERKATRTGRHIINFKMTDYTSSFALQKWAKDGDELRKFDMIAKGAW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY--------FHLQNSKSQVQGF 175
+R+ GN+++ K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNIETNPFTKSLTM----NVQQVKEIVHHERKDLMPEGQKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|118092956|ref|XP_421742.2| PREDICTED: CST complex subunit STN1 [Gallus gallus]
Length = 363
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 47 VKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWA 106
VK I E S F NG + V +VG+V +ER + ++ +DD TG + C W
Sbjct: 31 VKDIKEMRESKQVPGIFFYNGHPVRQVDVVGMVVQTKEREAFHSYGVDDSTGVINCICWK 90
Query: 107 SEVFDTR 113
+ V R
Sbjct: 91 NPVVGER 97
>gi|356528736|ref|XP_003532955.1| PREDICTED: CST complex subunit STN1-like [Glycine max]
Length = 183
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 13/121 (10%)
Query: 56 SGDDKSNFMINGLEITNVTLVGLVYNKEERASD-VNFTLDDGTGRVVCKRWASEV----- 109
S D ++F G+ I+ V VG + ++ + + F +DDGT V C W ++
Sbjct: 36 SSDATTSFFRRGIPISRVETVGTITLRDLKHDRFLRFAVDDGTACVPCVLWLNDANSPSV 95
Query: 110 -------FDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY 162
R ++ G R+ G L F+G Q+ V + + H ++CI
Sbjct: 96 ARRRRHELAARFAALVKLGAVARVRGRLSRFRGTLQVTVSDVAIERDPNAEIFHRLDCIL 155
Query: 163 F 163
Sbjct: 156 L 156
>gi|294901093|ref|XP_002777231.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239884762|gb|EER09047.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 112
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 16 GGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGD-DKSNFMINGLEITNVT 74
GGF P P S S +R+S GL+PVT M+ A + ++NF +G E +
Sbjct: 41 GGFGPVSP--STGRSKSDPSARESMGLIPVTAAMVINAFKEMEVGEANFKFHGKEAFMIE 98
Query: 75 LVGLVYNKEERA 86
+VG V + + RA
Sbjct: 99 IVGAVIDVQRRA 110
>gi|426253053|ref|XP_004020216.1| PREDICTED: CST complex subunit STN1 [Ovis aries]
Length = 368
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 24/119 (20%)
Query: 47 VKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW- 105
++ I + SG F NG I V ++G V E+ + ++ +DD TG + C W
Sbjct: 31 IRDILDLKESGQVPGVFFYNGHPIKQVDILGTVIGVREKDAFYSYGVDDSTGVINCICWK 90
Query: 106 -------------ASEVFDTREMEAIQD----------GMYVRLIGNLKSFQGKKQIVA 141
A E+ T +++ +Q+ G +R+ G+++ F+G+++I A
Sbjct: 91 SLNNTKSSSAAPSARELSLTSQLKKLQETTAQRAKLEIGDIIRVRGHIRMFRGEREIHA 149
>gi|116003915|ref|NP_001070317.1| CST complex subunit STN1 [Bos taurus]
gi|122132203|sp|Q08DB2.1|STN1_BOVIN RecName: Full=CST complex subunit STN1; AltName:
Full=Oligonucleotide/oligosaccharide-binding
fold-containing protein 1; AltName: Full=Suppressor of
cdc thirteen homolog
gi|115305224|gb|AAI23848.1| Oligonucleotide/oligosaccharide-binding fold containing 1 [Bos
taurus]
gi|296472683|tpg|DAA14798.1| TPA: oligonucleotide/oligosaccharide-binding fold containing 1 [Bos
taurus]
Length = 370
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 26/121 (21%)
Query: 47 VKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW- 105
++ I + SG + F NG I V ++G V E+ + ++ +DD TG + C W
Sbjct: 31 IRDILDLKESGQVQGVFFYNGHPIKQVDILGTVIGVREKDAFYSYGVDDSTGVINCICWK 90
Query: 106 ---------------ASEVFDTREMEAIQD----------GMYVRLIGNLKSFQGKKQIV 140
A E+ T +++ +Q+ G +R+ G+++ F+G+++I
Sbjct: 91 RLNNTKSSSATATPSARELSLTSQLKKLQETIAQRAKLEIGDIIRVRGHIRMFRGEREIH 150
Query: 141 A 141
A
Sbjct: 151 A 151
>gi|326923929|ref|XP_003208185.1| PREDICTED: CST complex subunit STN1-like [Meleagris gallopavo]
Length = 365
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 47 VKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWA 106
+K I E S F NG + V +VG+V +ER + ++ +DD TG + C W
Sbjct: 31 IKDIKEMKESKQVPGIFFYNGHPVRQVDVVGMVVQTKEREAFHSYGVDDSTGVINCVCWK 90
Query: 107 SEVFDTREM-EAIQDGMYVRLIGNLKSFQ 134
+ + R + + ++++ +K FQ
Sbjct: 91 NPMVAERSLSDCPSTPSSLKVLEQMKKFQ 119
>gi|333905729|ref|YP_004479600.1| DNA polymerase III PolC-type [Streptococcus parauberis KCTC 11537]
gi|333120994|gb|AEF25928.1| DNA polymerase III PolC-type [Streptococcus parauberis KCTC 11537]
Length = 1465
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDMIAKGSW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY--------IECIYFHLQNSKSQVQGF 175
+R+ GN+++ Q K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNVENNQFTKSLTM----NVQQVKEIVHHERKDLMPADKKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|329117787|ref|ZP_08246504.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus parauberis NCFD 2020]
gi|326908192|gb|EGE55106.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus parauberis NCFD 2020]
Length = 1465
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDMIAKGSW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY--------IECIYFHLQNSKSQVQGF 175
+R+ GN+++ Q K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNVENNQFTKSLTM----NVQQVKEIVHHERKDLMPADKKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|296481699|tpg|DAA23814.1| TPA: replication protein A2, 32kDa-like [Bos taurus]
Length = 121
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 152 EVTCHYIECIYFHLQNSKSQVQ----GFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSS 207
E T H +E + H SKS Q P S P M ++ SG P N
Sbjct: 5 EFTTHILEVVNAHKMLSKSNSQPSAGKAPISNPGMGEAG-------DFSGNNFIPAN--- 54
Query: 208 QFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLI 266
GL + +L+ ++ + R G++ +L QL+ + + ++ L NEG I
Sbjct: 55 -----GLTVAENQVLNLIK---ACLRPEGLNFQDLKNQLQHMSVASVKLAVDFLSNEGHI 106
Query: 267 YSTIDEFHYK 276
YST+D+ H+K
Sbjct: 107 YSTVDDDHFK 116
>gi|260808652|ref|XP_002599121.1| hypothetical protein BRAFLDRAFT_225066 [Branchiostoma floridae]
gi|229284397|gb|EEN55133.1| hypothetical protein BRAFLDRAFT_225066 [Branchiostoma floridae]
Length = 368
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 70 ITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
++ V L+G V EER N+ +DDGTG + C W V T +++ D Y
Sbjct: 49 VSRVDLLGWVVRVEEREKLFNYAIDDGTGVIGCTCWKPRVQSTTGEDSMDDTDY 102
>gi|357450885|ref|XP_003595719.1| hypothetical protein MTR_2g059620 [Medicago truncatula]
gi|355484767|gb|AES65970.1| hypothetical protein MTR_2g059620 [Medicago truncatula]
Length = 188
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 5 SQFDASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMIS 51
SQFD + F+GGGFMPSQ Q A+ P + ++ + L + ++S
Sbjct: 26 SQFDGNATFTGGGFMPSQTTQGANSPFTPSKGLNRSYLSKYLIALLS 72
>gi|457094313|gb|EMG24842.1| DNA polymerase III alpha subunit [Streptococcus parauberis
KRS-02083]
Length = 1465
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDMIAKGSW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY--------IECIYFHLQNSKSQVQGF 175
+R+ GN+++ Q K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNVENNQFTKSLTM----NVQQVKEIVHHERKDLMPADKKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|456370050|gb|EMF48948.1| DNA polymerase III alpha subunit [Streptococcus parauberis
KRS-02109]
Length = 1465
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDMIAKGSW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHY--------IECIYFHLQNSKSQVQGF 175
+R+ GN+++ Q K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNVENNQFTKSLTM----NVQQVKEIVHHERKDLMPADKKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|359479657|ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vitis vinifera]
gi|147810449|emb|CAN65336.1| hypothetical protein VITISV_023849 [Vitis vinifera]
Length = 165
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 67 GLEITNVTLVGLVYNKEERASD-VNFTLDDGTGRVVCKRWASE----------------V 109
G ++ +G V ++E + + FT+DDGTG V C W + +
Sbjct: 38 GTPLSRAETLGTVTSRELKPHKFLKFTVDDGTGCVPCVLWLNHLSSPYFSRRNPADVRLI 97
Query: 110 FDTREMEA--IQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
D E +A ++ G+ VR+ G + +++G QI +V + + H+++CI
Sbjct: 98 ADLAEYQASEVKLGVLVRVRGRITAYRGTVQITVSNVIVERDPNMEILHWLDCI 151
>gi|409351015|ref|ZP_11233901.1| CMP-binding-factor 1 [Lactobacillus equicursoris CIP 110162]
gi|407877029|emb|CCK85959.1| CMP-binding-factor 1 [Lactobacillus equicursoris CIP 110162]
Length = 317
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 91 FTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNF 150
L D +G V W +E D + E G V + G L+ +QG+ QI FS+ PV+
Sbjct: 37 LQLADKSGAVRANYWQAEPEDAKRFET---GTIVEVAGLLEDYQGRDQIKIFSIHPVSAS 93
Query: 151 DEV 153
+ V
Sbjct: 94 ENV 96
>gi|403235507|ref|ZP_10914093.1| 3'-5' exoribonuclease YhaM [Bacillus sp. 10403023]
Length = 314
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 89 VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVT 148
+ D +G + K W + D A + VRL G + S++G+ Q+ ++RPVT
Sbjct: 35 LTIVFQDKSGEIEAKLWDATSEDEANYAAQK---IVRLAGEINSYRGRNQLKIRNIRPVT 91
Query: 149 NFDEVTC 155
+ D VT
Sbjct: 92 DLDGVTI 98
>gi|408411119|ref|ZP_11182302.1| CMP-binding-factor 1 [Lactobacillus sp. 66c]
gi|407874782|emb|CCK84108.1| CMP-binding-factor 1 [Lactobacillus sp. 66c]
Length = 317
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 91 FTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNF 150
L D +G V W +E D + E G V + G L+ +QG+ QI FS+ PV+
Sbjct: 37 LQLADKSGAVRANYWQAEPEDAKRFET---GTIVEVAGLLEDYQGRDQIKIFSIHPVSAS 93
Query: 151 DEV 153
+ V
Sbjct: 94 ENV 96
>gi|156089651|ref|XP_001612232.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799486|gb|EDO08664.1| conserved hypothetical protein [Babesia bovis]
Length = 312
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 31/288 (10%)
Query: 13 FSGGGFMPSQPPQSADYPSST----ARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGL 68
+ GGF+ AD ++T A SR S L+PV + MI + F
Sbjct: 26 ITAGGFLDDDADHLADDSTTTHQKVAPSRLS--LMPVKISMIVNEWYKESGYIAFFNKIP 83
Query: 69 EITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRWASE---VFDTREMEAI-QDGMYV 124
+I + ++G V + F +DDGT R+ C + F +++E + Q V
Sbjct: 84 DI--IKILGRVERYMCTDENTQFVIDDGTARITCVYVHTNNLTPFRQKQLERVMQTTKMV 141
Query: 125 RLIGNLKSFQGKK--QIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKS----QVQGFPSS 178
+ G+ K +V + +R + +E H+ + + L+N + QV S
Sbjct: 142 VVYGSYNPVYSVKCPVLVIYKIREIYTANEFALHHFDVVNLILRNERESSTMQVANPIDS 201
Query: 179 QPQM-VDSSLNTSARTGLSGYQTAPTNLS---SQFGVDGLKDCDQMILDYLQQPSSSERE 234
P + +D+ + + Q PTN+ +Q DG + I L + +
Sbjct: 202 MPVVNIDNHVVGQMENMIPSGQ--PTNVQHQPAQMDADGGITLMRFIARTLAEETRKGNL 259
Query: 235 RGVHVNELSEQLK-------IPQKKIMDSIASLENEGLIYSTIDEFHY 275
G+ V E++++ I ++ + + LE + +Y TID Y
Sbjct: 260 NGITVTEITQRCNMHRNFQSITEQHVRKVLFELEKDASVYQTIDANTY 307
>gi|67464347|pdb|1Z1D|A Chain A, Structural Model For The Interaction Between Rpa32 C-
Terminal Domain And Sv40 T Antigen Origin Binding Domain
Length = 103
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 19/114 (16%)
Query: 164 HLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILD 223
H+ NS+ P S P M ++ G P N GL +L+
Sbjct: 3 HMANSQPSAGRAPISNPGMSEAG-------NFGGNSFMPAN--------GLTVAQNQVLN 47
Query: 224 YLQQPSSSERERGVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
++ + R G++ +L QLK + I ++ L NEG IYST+D+ H+K
Sbjct: 48 LIK---ACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFK 98
>gi|146081832|ref|XP_001464369.1| putative replication Factor A 28 kDa subunit [Leishmania infantum
JPCM5]
gi|398012726|ref|XP_003859556.1| replication Factor A 28 kDa subunit, putative [Leishmania donovani]
gi|134068461|emb|CAM66751.1| putative replication Factor A 28 kDa subunit [Leishmania infantum
JPCM5]
gi|322497772|emb|CBZ32848.1| replication Factor A 28 kDa subunit, putative [Leishmania donovani]
Length = 257
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 114/276 (41%), Gaps = 51/276 (18%)
Query: 9 ASNAFSGGGFMPSQPPQSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGL 68
AS+ SGG Q PQ +P + P+T+K + EA G
Sbjct: 15 ASSNNSGG-----QQPQRRMHP-----------IRPLTIKQMLEAQSVGGGVLVVDGR-- 56
Query: 69 EITNVTLVGLVYNKEE----------RASDVNFTLDDGTGRVVCKRWASEVFDTREMEAI 118
E+T T+VG V E A + + D TG +V ++W + R E +
Sbjct: 57 EVTQATVVGRVLGYENANMASGGGAITAKHFGYRITDNTGMLVVRQW---IDADRMQEPL 113
Query: 119 QDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSS 178
+VR G + +Q + IV +V + + +E+ H ++ I H + ++ + PSS
Sbjct: 114 PLNTHVRASGTVNVWQ-QNPIVTGTVVSMADSNEMNYHMLDAILTHFRLTQGNKRA-PSS 171
Query: 179 QPQMVDSSLNTSARTGLSGYQTAPTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVH 238
S NT++ G+ + P G D +++ +++Q SS G+
Sbjct: 172 GV----SIQNTASAVGM--HNMLP-------GGDIKVLLTDLLVSFIKQHGSS--GAGMS 216
Query: 239 VNELS---EQLKIPQKKIMDSIASLENEGLIYSTID 271
++EL+ ++ + ++ +L EG +Y T D
Sbjct: 217 MDELTTSAQRYGFTHGDVRTAMRTLAAEGKVYQTHD 252
>gi|395333489|gb|EJF65866.1| hypothetical protein DICSQDRAFT_165568 [Dichomitus squalens
LYAD-421 SS1]
Length = 382
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 44 PVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGT--GRVV 101
PVT++ + +A + + F I+ EI ++LV + S V +TL+DGT GR+
Sbjct: 30 PVTIRQLLDAKRDHSE-APFKIDDHEINRISLVAHAVDVHRYESTVVYTLEDGTSLGRID 88
Query: 102 CKRWAS-----EVFDTREMEAIQDGMYVRLIG--NLKSFQGKKQIV-AFSVRPVTNFDEV 153
+ + + E+ D+ + + +YV ++G +LK G + ++ + VT+ +++
Sbjct: 89 ARHYPTGSSFEELSDSDQGTS---QLYVHVLGTLDLKVKLGSRNVIRVLHMYRVTDPNQL 145
Query: 154 TCHYIECIYFHL 165
H +E + L
Sbjct: 146 FFHILEAAFVTL 157
>gi|417927912|ref|ZP_12571300.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus dysgalactiae subsp. equisimilis SK1250]
gi|340765786|gb|EGR88312.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus dysgalactiae subsp. equisimilis SK1250]
Length = 1465
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY--------FHLQNSKSQVQGF 175
+R+ GN+++ K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNIETNPFTKSLTM----NVQQVKEIVHHERKDLMPEGQKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|386316181|ref|YP_006012345.1| DNA polymerase III PolC [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|417753007|ref|ZP_12401163.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus dysgalactiae subsp. equisimilis SK1249]
gi|323126468|gb|ADX23765.1| DNA polymerase III PolC [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333771104|gb|EGL48068.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus dysgalactiae subsp. equisimilis SK1249]
Length = 1465
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY--------FHLQNSKSQVQGF 175
+R+ GN+++ K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNIETNPFTKSLTM----NVQQVKEIVHHERKDLMPEGQKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|422758204|ref|ZP_16811966.1| DNA polymerase III PolC [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411039|gb|EFY01947.1| DNA polymerase III PolC [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 1465
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY--------FHLQNSKSQVQGF 175
+R+ GN+++ K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNIETNPFTKSLTM----NVQQVKEIVHHERKDLMPEGQKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|410493978|ref|YP_006903824.1| DNA polymerase III PolC [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410439138|emb|CCI61766.1| DNA polymerase III PolC [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 1465
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY--------FHLQNSKSQVQGF 175
+R+ GN+++ K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNIETNPFTKSLTM----NVQQVKEIVHHERKDLMPEGQKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|408400936|ref|YP_006858899.1| DNA polymerase III subunit alpha [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|407967164|dbj|BAM60402.1| DNA polymerase III subunit alpha [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 1465
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY--------FHLQNSKSQVQGF 175
+R+ GN+++ K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNIETNPFTKSLTM----NVQQVKEIVHHERKDLMPEGQKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|251781676|ref|YP_002995978.1| DNA polymerase III PolC [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390305|dbj|BAH80764.1| DNA polymerase III subunit alpha [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 1465
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIY--------FHLQNSKSQVQGF 175
+R+ GN+++ K + V E+ H + + FH + S +
Sbjct: 300 LRVQGNIETNPFTKSLTM----NVQQVKEIVHHERKDLMPEGQKRVEFHAHTNMSTMDAL 355
Query: 176 PSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 356 PT-----VESLIDTAAKWG 369
>gi|332522391|ref|ZP_08398643.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus porcinus str. Jelinkova 176]
gi|332313655|gb|EGJ26640.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus porcinus str. Jelinkova 176]
Length = 1466
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 241 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDMIAKGSW 300
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV S + + D+ + + H + S +
Sbjct: 301 LRVQGNIENNQFTKSLTMNVQQIKEIVHHSRKDLMPDDQ------KRVELHAHTNMSTMD 354
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 355 ALPT-----VESLIDTAAKWG 370
>gi|429327164|gb|AFZ78924.1| hypothetical protein BEWA_017650 [Babesia equi]
Length = 293
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 16 GGFMPSQPPQ-SADYPSSTARSRDSQG--LVPVTVKMISEASHSGDDKSNFMINGLEITN 72
GGF+ D SS +S + Q +P+ + MI A SG N LEI
Sbjct: 28 GGFLDEDVSNFITDDVSSKNKSENVQKKTFMPLKISMIHNAWKSGGSFLNVFGYQLEI-- 85
Query: 73 VTLVGLVYNKEERASDVNFTLDDGTGRVVC------------KRWASEVFDTREMEAIQD 120
+ +VG + + + F +DDG+G+V C KR+ S + +++
Sbjct: 86 IKIVGRIKETKSTDQETTFVVDDGSGKVDCIYMHPGDISEWRKRFLSNLDKNKQL----- 140
Query: 121 GMYVRLIGNLKSFQGKK--QIVAFSVRPVTNFDEVTCHYIECI 161
V++ G + I+ +S++ +++ DE H ++ I
Sbjct: 141 ---VKIYGGFNPIYSTQVPTIIIYSIKELSSPDESKLHDLDVI 180
>gi|357483465|ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatula]
gi|355513354|gb|AES94977.1| CST complex subunit STN1 [Medicago truncatula]
Length = 185
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 20/119 (16%)
Query: 63 FMINGLEITNVTLVGLVYNKEERASD-VNFTLDDGTGRVVCKRWASEVFD---------- 111
F N + IT VG + ++ + + F +DDGTG + C W + +
Sbjct: 37 FTRNSIPITRAETVGTITLRDHKPFKFLRFAIDDGTGCIPCILWLNHMTSPHLARRRSPQ 96
Query: 112 ---------TREMEAIQDGMYVRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECI 161
R E ++ G R+ G + ++G QI V + + H++EC+
Sbjct: 97 DLCLLADAAARSAEVVKVGNVARVRGRVTEYKGGVQITVTDVISERDPNVEVLHWVECV 155
>gi|19746871|ref|NP_608007.1| DNA polymerase III PolC [Streptococcus pyogenes MGAS8232]
gi|24418360|sp|Q8NZB5.1|DPO3_STRP8 RecName: Full=DNA polymerase III PolC-type; Short=PolIII
gi|19749113|gb|AAL98506.1| DNA polymerase III alpha chain [Streptococcus pyogenes MGAS8232]
Length = 1465
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKS--FQGKKQIVAFSVRPVTNFD--EVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
+R+ GN+++ F + V+ + + D ++ + + H + S + P+
Sbjct: 300 LRVQGNIETNPFTKSLTMNVQQVKEIVHHDRKDLMPEGQKRVELHAHTNMSTMDALPT-- 357
Query: 180 PQMVDSSLNTSARTG 194
V+S ++T+A+ G
Sbjct: 358 ---VESLIDTAAKWG 369
>gi|94989303|ref|YP_597404.1| DNA polymerase III PolC [Streptococcus pyogenes MGAS9429]
gi|94993192|ref|YP_601291.1| DNA polymerase III PolC [Streptococcus pyogenes MGAS2096]
gi|417856085|ref|ZP_12501144.1| DNA polymerase III PolC [Streptococcus pyogenes HKU QMH11M0907901]
gi|123257711|sp|Q1J9R4.1|DPO3_STRPB RecName: Full=DNA polymerase III PolC-type; Short=PolIII
gi|123382486|sp|Q1JJW3.1|DPO3_STRPC RecName: Full=DNA polymerase III PolC-type; Short=PolIII
gi|94542811|gb|ABF32860.1| DNA polymerase III alpha subunit [Streptococcus pyogenes MGAS9429]
gi|94546700|gb|ABF36747.1| DNA polymerase III alpha subunit [Streptococcus pyogenes MGAS2096]
gi|387933040|gb|EIK41153.1| DNA polymerase III PolC [Streptococcus pyogenes HKU QMH11M0907901]
Length = 1465
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKS--FQGKKQIVAFSVRPVTNFD--EVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
+R+ GN+++ F + V+ + + D ++ + + H + S + P+
Sbjct: 300 LRVQGNIETNPFTKSLTMNVQQVKEIVHHDRKDLMPEGQKRVELHAHTNMSTMDALPT-- 357
Query: 180 PQMVDSSLNTSARTG 194
V+S ++T+A+ G
Sbjct: 358 ---VESLIDTAAKWG 369
>gi|71904322|ref|YP_281125.1| DNA polymerase III PolC [Streptococcus pyogenes MGAS6180]
gi|123747742|sp|Q48R90.1|DPO3_STRPM RecName: Full=DNA polymerase III PolC-type; Short=PolIII
gi|71803417|gb|AAX72770.1| DNA polymerase III alpha subunit [Streptococcus pyogenes MGAS6180]
Length = 1465
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKS--FQGKKQIVAFSVRPVTNFD--EVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
+R+ GN+++ F + V+ + + D ++ + + H + S + P+
Sbjct: 300 LRVQGNIETNPFTKSLTMNVQQVKEIVHHDRKDLMPEGQKRVELHAHTNMSTMDALPT-- 357
Query: 180 PQMVDSSLNTSARTG 194
V+S ++T+A+ G
Sbjct: 358 ---VESLIDTAAKWG 369
>gi|306826600|ref|ZP_07459906.1| DNA polymerase III PolC [Streptococcus pyogenes ATCC 10782]
gi|304431208|gb|EFM34211.1| DNA polymerase III PolC [Streptococcus pyogenes ATCC 10782]
Length = 1465
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAW 299
Query: 124 VRLIGNLKS--FQGKKQIVAFSVRPVTNFD--EVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
+R+ GN+++ F + V+ + + D ++ + + H + S + P+
Sbjct: 300 LRVQGNIETNPFTKSLTMNVQQVKEIVHHDRKDLMPEGQKRVELHAHTNMSTMDALPT-- 357
Query: 180 PQMVDSSLNTSARTG 194
V+S ++T+A+ G
Sbjct: 358 ---VESLIDTAAKWG 369
>gi|194384592|dbj|BAG59456.1| unnamed protein product [Homo sapiens]
Length = 104
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 182 MVDSSLNTSARTGLSGYQTAPTNLSSQFG------VDGLKDCDQMILDYLQQPSSSERER 235
MV S N+ G + + + FG +GL +L+ ++ + R
Sbjct: 1 MVLSKANSQPSAGRAPISNPGMSEAGNFGGNSFMPANGLTVAQNQVLNLIK---ACPRPE 57
Query: 236 GVHVNELSEQLK-IPQKKIMDSIASLENEGLIYSTIDEFHYK 276
G++ +L QLK + I ++ L NEG IYST+D+ H+K
Sbjct: 58 GLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFK 99
>gi|374310938|ref|YP_005057368.1| metal dependent phosphohydrolase [Granulicella mallensis MP5ACTX8]
gi|358752948|gb|AEU36338.1| metal dependent phosphohydrolase [Granulicella mallensis MP5ACTX8]
Length = 343
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 70 ITNVTLVGLVYNKEERASD---VNFTLDDGTGRVVCKRWASEVFDTREMEAIQ---DGMY 123
IT+ + + +E +A + TL D TG+ + W E F EA+Q +G Y
Sbjct: 17 ITSFFCIATIGVRERKAGSGQYLALTLADKTGQFEARMW--EDF----AEAVQQCTEGSY 70
Query: 124 VRLIGNLKSFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPS--SQPQ 181
V++ G + +QGK QI +R + + T ++ F + ++++G+ S PQ
Sbjct: 71 VKVQGQVSKYQGKFQITLNKMRLAADSEIDTADFVPTTQFDVAEMNAELRGYVDAFSNPQ 130
Query: 182 M 182
+
Sbjct: 131 L 131
>gi|343957967|emb|CCA30600.1| replication factor A protein 2 homolog, partial [Glomus diaphanum]
Length = 164
Score = 37.0 bits (84), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 41/198 (20%)
Query: 82 KEERASDVNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKSFQGKKQIVA 141
K R +++ +DDGTG + K W D+ E KK I+
Sbjct: 1 KTPRHQGIDYVVDDGTGFIDVKVWHD---DSEETNV-----------------NKKLILP 40
Query: 142 FSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTSARTGLSGYQTA 201
V P+ + +E++ H + I HL +K ++++ N + S Y+
Sbjct: 41 HVVHPIVDHNEISYHMADVIRAHLYLTK------------VLNNQSNNQMTSTSSTYEYQ 88
Query: 202 PTNLSSQFGVDGLKDCDQMILDYLQQPSSSERERGVHVNELSEQLKI---PQKKIMDSIA 258
+ S G + + I D + + +++ + G +V+E+++QL + + +I
Sbjct: 89 SRSSSGH----GNQQLHKDIFDLISKQNNT--QIGANVDEIAQQLAFQYGSDQNVRFAIE 142
Query: 259 SLENEGLIYSTIDEFHYK 276
+ +G +Y T D+ H K
Sbjct: 143 DMIGDGQLYVTSDDNHVK 160
>gi|77414701|ref|ZP_00790833.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae 515]
gi|77159245|gb|EAO70424.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae 515]
Length = 1036
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + ++ + I G +
Sbjct: 243 EENRIVFEGMVFSVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDEELKKYDMISKGSW 302
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV + + D+ + + FH + S +
Sbjct: 303 LRVRGNIENNNFTKSLTMNVQDIKEIVHHERKDLMPADQ------KRVEFHAHTNMSTMD 356
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 357 ALPT-----VESLIDTAAKWG 372
>gi|22538049|ref|NP_688900.1| DNA polymerase III PolC [Streptococcus agalactiae 2603V/R]
gi|25011937|ref|NP_736332.1| DNA polymerase III PolC [Streptococcus agalactiae NEM316]
gi|76798733|ref|ZP_00780952.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae 18RS21]
gi|54036993|sp|P63984.1|DPO3_STRA5 RecName: Full=DNA polymerase III PolC-type; Short=PolIII
gi|54040954|sp|P63983.1|DPO3_STRA3 RecName: Full=DNA polymerase III PolC-type; Short=PolIII
gi|22534952|gb|AAN00773.1|AE014277_21 DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae 2603V/R]
gi|24413479|emb|CAD47557.1| DNA polymerase III (alpha subunit) [Streptococcus agalactiae
NEM316]
gi|76585912|gb|EAO62451.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae 18RS21]
Length = 1468
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + ++ + I G +
Sbjct: 243 EENRIVFEGMVFSVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDEELKKYDMISKGSW 302
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV + + D+ + + FH + S +
Sbjct: 303 LRVRGNIENNNFTKSLTMNVQDIKEIVHHERKDLMPADQ------KRVEFHAHTNMSTMD 356
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 357 ALPT-----VESLIDTAAKWG 372
>gi|417006236|ref|ZP_11944806.1| DNA polymerase III PolC [Streptococcus agalactiae FSL S3-026]
gi|341576417|gb|EGS26828.1| DNA polymerase III PolC [Streptococcus agalactiae FSL S3-026]
Length = 1468
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + ++ + I G +
Sbjct: 243 EENRIVFEGMVFSVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDEELKKYDMISKGSW 302
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV + + D+ + + FH + S +
Sbjct: 303 LRVRGNIENNNFTKSLTMNVQDIKEIVHHERKDLMPADQ------KRVEFHAHTNMSTMD 356
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 357 ALPT-----VESLIDTAAKWG 372
>gi|77412300|ref|ZP_00788615.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae CJB111]
gi|77161647|gb|EAO72643.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae CJB111]
Length = 1468
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + ++ + I G +
Sbjct: 243 EENRIVFEGMVFSVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDEELKKYDMISKGSW 302
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV + + D+ + + FH + S +
Sbjct: 303 LRVRGNIENNNFTKSLTMNVQDIKEIVHHERKDLMPADQ------KRVEFHAHTNMSTMD 356
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 357 ALPT-----VESLIDTAAKWG 372
>gi|414564867|ref|YP_006043828.1| DNA polymerase III PolC-type [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338847932|gb|AEJ26144.1| DNA polymerase III PolC-type [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 1465
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 80/184 (43%), Gaps = 26/184 (14%)
Query: 22 QPP--QSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLV 79
QPP ++A PS R R +Q +AS + + E + G+V
Sbjct: 201 QPPAEEAAPSPSLDYRERMAQ----------RQASFDKAVITPMIEVDTEENRIVFEGMV 250
Query: 80 YNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS-- 132
++ E + + +NF + D T ++WA + + R+ + I G ++R+ GN+++
Sbjct: 251 FDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDLIAKGAWLRVQGNIENNP 310
Query: 133 FQGKKQIVAFSVRPVTNFD--EVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTS 190
F + V+ + + + ++ + + FH + S + P+ V+ ++T+
Sbjct: 311 FTKSLTMNVQQVKAIVHHERKDLMPEGQKRVEFHAHTNMSTMDALPT-----VEDLIDTA 365
Query: 191 ARTG 194
AR G
Sbjct: 366 ARWG 369
>gi|339300681|ref|ZP_08649817.1| DNA polymerase III PolC [Streptococcus agalactiae ATCC 13813]
gi|319745868|gb|EFV98158.1| DNA polymerase III PolC [Streptococcus agalactiae ATCC 13813]
Length = 1468
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + ++ + I G +
Sbjct: 243 EENRIVFEGMVFSVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDEELKKYDMISKGSW 302
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV + + D+ + + FH + S +
Sbjct: 303 LRVRGNIENNNFTKSLTMNVQDIKEIVHHERKDLMPADQ------KRVEFHAHTNMSTMD 356
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 357 ALPT-----VESLIDTAAKWG 372
>gi|74179582|dbj|BAE22465.1| unnamed protein product [Mus musculus]
Length = 351
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 27/122 (22%)
Query: 47 VKMISEASHSGDDKSNFMINGLEITNVTLVGLVYNKEERASDVNFTLDDGTGRVVCKRW- 105
+K I E S + NG I V ++G V + +ER + ++ +DD TG + C W
Sbjct: 38 IKDILEMKESQQVPGTYFYNGHPIRRVDIMGAVISVKERETFYSYGVDDATGVINCVCWK 97
Query: 106 ----------------ASEVFDTREMEAIQD----------GMYVRLIGNLKSFQGKKQI 139
A E+ T +++ +Q+ G +R+ G+++ F+ +++I
Sbjct: 98 KLSNAESSSDPAILSTARELSMTSQLKKLQETIEQKTRIGIGDIIRVRGSVRMFREEREI 157
Query: 140 VA 141
A
Sbjct: 158 CA 159
>gi|410595221|ref|YP_006951948.1| DNA polymerase III polC-type [Streptococcus agalactiae SA20-06]
gi|421531708|ref|ZP_15978087.1| DNA polymerase III PolC [Streptococcus agalactiae STIR-CD-17]
gi|403643038|gb|EJZ03830.1| DNA polymerase III PolC [Streptococcus agalactiae STIR-CD-17]
gi|410518860|gb|AFV73004.1| DNA polymerase III polC-type [Streptococcus agalactiae SA20-06]
Length = 1468
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + ++ + I G +
Sbjct: 243 EENRIVFEGMVFSVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDEELKKYDMISKGSW 302
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV + + D+ + + FH + S +
Sbjct: 303 LRVRGNIENNNFTKSLTMNVQDIKEIVHHERKDLMPADQ------KRVEFHAHTNMSTMD 356
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 357 ALPT-----VESLIDTAAKWG 372
>gi|225871273|ref|YP_002747220.1| DNA polymerase III PolC [Streptococcus equi subsp. equi 4047]
gi|225700677|emb|CAW95265.1| DNA polymerase III PolC-type [Streptococcus equi subsp. equi 4047]
Length = 1465
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 80/184 (43%), Gaps = 26/184 (14%)
Query: 22 QPP--QSADYPSSTARSRDSQGLVPVTVKMISEASHSGDDKSNFMINGLEITNVTLVGLV 79
QPP ++A PS R R +Q +AS + + E + G+V
Sbjct: 201 QPPAEEAAPSPSLDYRERMAQ----------RQASFDKAVITPMIEVDTEENRIVFEGMV 250
Query: 80 YNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMYVRLIGNLKS-- 132
++ E + + +NF + D T ++WA + + R+ + I G ++R+ GN+++
Sbjct: 251 FDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDLIAKGAWLRVQGNIENNP 310
Query: 133 FQGKKQIVAFSVRPVTNFD--EVTCHYIECIYFHLQNSKSQVQGFPSSQPQMVDSSLNTS 190
F + V+ + + + ++ + + FH + S + P+ V+ ++T+
Sbjct: 311 FTKSLTMNVQQVKAIVHHERKDLMPEGQKRVEFHAHTNMSTMDALPT-----VEDLIDTA 365
Query: 191 ARTG 194
AR G
Sbjct: 366 ARWG 369
>gi|195978859|ref|YP_002124103.1| DNA polymerase III PolC [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975564|gb|ACG63090.1| DNA polymerase III PolC [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 1465
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + R+ + I G +
Sbjct: 240 EENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKFDLIAKGAW 299
Query: 124 VRLIGNLKS--FQGKKQIVAFSVRPVTNFD--EVTCHYIECIYFHLQNSKSQVQGFPSSQ 179
+R+ GN+++ F + V+ + + + ++ + + FH + S + P+
Sbjct: 300 LRVQGNIENNPFTKSLTMNVQQVKAIVHHERKDLMPEGQKRVEFHAHTNMSTMDALPT-- 357
Query: 180 PQMVDSSLNTSARTG 194
V+ ++T+AR G
Sbjct: 358 ---VEDLIDTAARWG 369
>gi|77409408|ref|ZP_00786106.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae COH1]
gi|421147126|ref|ZP_15606819.1| DNA polymerase III PolC [Streptococcus agalactiae GB00112]
gi|77171990|gb|EAO75161.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae COH1]
gi|401686203|gb|EJS82190.1| DNA polymerase III PolC [Streptococcus agalactiae GB00112]
Length = 1468
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + ++ + I G +
Sbjct: 243 EENRIVFEGMVFSVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDEELKKYDMISKGSW 302
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV + + D+ + + FH + S +
Sbjct: 303 LRVRGNIENNNFTKSLTMNVQDIKEIVHHERKDLMPADQ------KRVEFHAHTNMSTMD 356
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 357 ALPT-----VESLIDTAAKWG 372
>gi|77405656|ref|ZP_00782744.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae H36B]
gi|77175729|gb|EAO78510.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae H36B]
Length = 1468
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + ++ + I G +
Sbjct: 243 EENRIVFEGMVFSVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDEELKKYDMISKGSW 302
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV + + D+ + + FH + S +
Sbjct: 303 LRVRGNIENNNFTKSLTMNVQDIKEIVHHERKDLMPADQ------KRVEFHAHTNMSTMD 356
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 357 ALPT-----VESLIDTAAKWG 372
>gi|76787214|ref|YP_330464.1| DNA polymerase III PolC [Streptococcus agalactiae A909]
gi|406710240|ref|YP_006764966.1| DNA polymerase III PolC [Streptococcus agalactiae GD201008-001]
gi|424048692|ref|ZP_17786243.1| DNA polymerase III PolC [Streptococcus agalactiae ZQ0910]
gi|76562271|gb|ABA44855.1| DNA polymerase III, alpha subunit, Gram-positive type
[Streptococcus agalactiae A909]
gi|389649713|gb|EIM71188.1| DNA polymerase III PolC [Streptococcus agalactiae ZQ0910]
gi|406651125|gb|AFS46526.1| DNA polymerase III PolC [Streptococcus agalactiae GD201008-001]
Length = 1468
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 69 EITNVTLVGLVYNKEERASD-----VNFTLDDGTGRVVCKRWASEVFDTREMEAIQDGMY 123
E + G+V++ E + + +NF + D T ++WA + + ++ + I G +
Sbjct: 243 EENRIVFEGMVFSVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDEELKKYDMISKGSW 302
Query: 124 VRLIGNLK----------SFQGKKQIVAFSVRPVTNFDEVTCHYIECIYFHLQNSKSQVQ 173
+R+ GN++ + Q K+IV + + D+ + + FH + S +
Sbjct: 303 LRVRGNIENNNFTKSLTMNVQDIKEIVHHERKDLMPADQ------KRVEFHAHTNMSTMD 356
Query: 174 GFPSSQPQMVDSSLNTSARTG 194
P+ V+S ++T+A+ G
Sbjct: 357 ALPT-----VESLIDTAAKWG 372
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.130 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,198,982,615
Number of Sequences: 23463169
Number of extensions: 165744817
Number of successful extensions: 476567
Number of sequences better than 100.0: 586
Number of HSP's better than 100.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 215
Number of HSP's that attempted gapping in prelim test: 475328
Number of HSP's gapped (non-prelim): 645
length of query: 280
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 140
effective length of database: 9,074,351,707
effective search space: 1270409238980
effective search space used: 1270409238980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)