BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023578
(280 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3M9L|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5
pdb|2YBD|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Phosphate
pdb|3R09|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Mg
Length = 205
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAENPTGIDILHHIESWSPDLQR 125
+ ++ VFD DGTLT+ V DF A+ A+ + AE+ DIL H+ + D
Sbjct: 4 SEIKHWVFDXDGTLTIAVHDFAAIREAL-------SIPAED----DILTHLAALPADESA 52
Query: 126 HAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT-- 183
+ + + ER + PG +L L + R G++TRN +E + G+
Sbjct: 53 AKHAWLLEHERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADC 112
Query: 184 FSPA--LSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLD 241
F+ A L R+ P KP PG LL + W+V P+ + VGD + D+ CG+ AG T L++
Sbjct: 113 FAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRXVXVGD-YRFDLDCGRAAGTRTVLVN 171
>pdb|2GFH|A Chain A, Crystal Structure Of A N-acetylneuraminic Acid Phosphatase
(nanp) From Mus Musculus At 1.90 A Resolution
Length = 260
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 191 EFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG-AFTCLLDETGRYSAD 249
E + KP P H C VQP + +MVGD+L+ D+ G AG T ++++GR
Sbjct: 171 EQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVP-- 228
Query: 250 DFTKSNLQPDFRVSSLTEVLSILEA 274
T S + P + VSS+ E+ ++L++
Sbjct: 229 -LTSSPM-PHYMVSSVLELPALLQS 251
>pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid
Phosphatase, Nanp
Length = 270
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 191 EFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG-AFTCLLDETGRYSAD 249
E R KP P + C+ VQP + +MVGD+L+ D+ G AG T +++ G
Sbjct: 181 EQREEKPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKNGIVP-- 238
Query: 250 DFTKSNLQPDFRVSSLTEVLSILEA 274
KS+ P + VSS+ E+ ++L++
Sbjct: 239 --LKSSPVPHYMVSSVLELPALLQS 261
>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase
From Aquifex Aeolicus
Length = 222
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 68 LRGVVFDMDGTLTVPVIDFP-AMYRAV--LGEDEYKRVKAENPTGIDILHHIESWSPDLQ 124
LR ++FD+DGTL D A+ + + LG +EY G + +E D
Sbjct: 3 LRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLKDKF 62
Query: 125 RHAYQTIADFERQGLDRLQIM----PGTAQLCGFLDSKKIRRGLITRNIKE----AVDLF 176
R Y + F + L+ + P L SK + +++ ++E +D+
Sbjct: 63 REEYVEV--FRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDIL 120
Query: 177 HNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAF 236
N G F KP P P+L +P + ++VGD+ D+ GKRAG
Sbjct: 121 -NLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDT-DADIEAGKRAGTK 178
Query: 237 TCLLDETGRYSADDFTKSNLQ-PDFRVSSLTEVLSI 271
T L + + K N Q PDF +S ++++ +
Sbjct: 179 TAL-------ALWGYVKLNSQIPDFTLSRPSDLVKL 207
>pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Np_784602.1) From Lactobacillus Plantarum At 1.50 A
Resolution
Length = 209
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 69 RGVVFDMDGTLTVPVIDFPAMYRAVLG-----------EDEYKRVKAENPTGIDI----L 113
+ + FD+DGTLT + + R VL + + + T + I
Sbjct: 5 QALXFDIDGTLTNSQPAYTTVXREVLATYGKPFSPAQAQKTFPXAAEQAXTELGIAASEF 64
Query: 114 HHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAV 173
H ++ D+ Y D++++ PG L L S+ +R G++T + +
Sbjct: 65 DHFQAQYEDVXASHY-----------DQIELYPGITSLFEQLPSE-LRLGIVTSQRRNEL 112
Query: 174 DL------FHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDD 226
+ F R +T S + + KPDP PLL V P + +GDS+ D+
Sbjct: 113 ESGXRSYPFXXRXAVTIS---ADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDE 168
>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
pdb|2YY6|B Chain B, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
Length = 213
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 69 RGVVFDMDGTLTVPVIDFP-AMYRAV--LGEDEYKRVKAENPTGIDILHHIESWSPDLQR 125
R ++FD+DGTL D A+ + + LG +EY G + +E D R
Sbjct: 2 RVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLKDKFR 61
Query: 126 HAYQTIADFERQGLDRLQIM----PGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFG 181
Y + F + L+ + P L SK + +++ ++E +
Sbjct: 62 EEYVEV--FRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILN 119
Query: 182 IT--FSPALSRE-FRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTC 238
++ F + + F KP P P+L +P + ++VGD+ D+ GKRAG T
Sbjct: 120 LSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDT-DADIEAGKRAGTKTA 178
Query: 239 LLDETGRYSADDFTKSNLQ-PDFRVSSLTEVLSI 271
L + + K N Q PDF +S ++++ +
Sbjct: 179 L-------ALWGYVKLNSQIPDFTLSRPSDLVKL 205
>pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase
(Ph1655) From Pyrococcus Horikoshii Ot3
Length = 241
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP P + V+P E +MVGD L D+ KR G T G++S +
Sbjct: 150 KPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWF-RYGKHSERELEYRK 208
Query: 256 LQPDFRVSSLTEVLSIL 272
D+ + +L +L +L
Sbjct: 209 Y-ADYEIDNLESLLEVL 224
>pdb|2HSZ|A Chain A, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
pdb|2HSZ|B Chain B, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
Length = 243
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 35/233 (15%)
Query: 66 TRLRGVVFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAEN------PTGIDIL-HHIES 118
T+ + + FD+DGTL + D + L + + +EN G D+L
Sbjct: 21 TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQA-SENLVXTWIGNGADVLSQRAVD 79
Query: 119 WSPDLQRHAYQTIAD-----FERQ----------GLDRLQIMPGTAQLCGFLDSKKIRRG 163
W+ + A + + + F+RQ + RL P + L ++
Sbjct: 80 WAC---KQAEKELTEDEFKYFKRQFGFYYGENLCNISRL--YPNVKETLEALKAQGYILA 134
Query: 164 LITRNIKEAVDLFHNRFGI--TFSPALSREFRP-YKPDPGPLLHICSTWEVQPNEVMMVG 220
++T + V FGI FS L + P KP P P ++C + + P +++ VG
Sbjct: 135 VVTNKPTKHVQPILTAFGIDHLFSEXLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVG 194
Query: 221 DSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
DS ++D+ AG L Y + + +PD+ ++L I +
Sbjct: 195 DS-QNDIFAAHSAGCAVVGLTYGYNY---NIPIAQSKPDWIFDDFADILKITQ 243
>pdb|1VJR|A Chain A, Crystal Structure Of 4-nitrophenylphosphatase (tm1742)
From Thermotoga Maritima At 2.40 A Resolution
Length = 271
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP+P + I + V VGD L DV GK AG + L+ TG + +D ++
Sbjct: 195 KPNPLVVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAGIVSILV-LTGETTPEDLERAE 253
Query: 256 LQPDFRVSSLTEVLSILE 273
+PDF +L E+ ++
Sbjct: 254 TKPDFVFKNLGELAKAVQ 271
>pdb|1PW5|A Chain A, Putative Nagd Protein
Length = 253
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP+P + I + V VGD L DV GK AG + L+ TG + +D ++
Sbjct: 183 KPNPLVVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAGIVSILV-LTGETTPEDLERAE 241
Query: 256 LQPDFRVSSLTE 267
+PDF +L E
Sbjct: 242 TKPDFVFKNLGE 253
>pdb|2OM6|A Chain A, Hypothetical Protein (probable Phosphoserine Phosph
(ph0253) From Pyrococcus Horikoshii Ot3
pdb|2OM6|B Chain B, Hypothetical Protein (probable Phosphoserine Phosph
(ph0253) From Pyrococcus Horikoshii Ot3
Length = 235
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 139 LDRLQIMPGTAQLCGFLDSKKIRRGLITRNIK----EAVDLFHNRFGI------TFSPAL 188
+D ++ GT + F+ + ++ +I N+ L RFG+ TF
Sbjct: 95 VDESLVLEGTKEALQFVKERGLKTAVIG-NVXFWPGSYTRLLLERFGLXEFIDKTF---F 150
Query: 189 SREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244
+ E YKP + +++EV+P E + +GD+ +D ++ G + +++ G
Sbjct: 151 ADEVLSYKPRKEXFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGXWAVWINQEG 206
>pdb|3VAY|A Chain A, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
pdb|3VAY|B Chain B, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
Length = 230
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 137 QGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGIT--FSPALSRE-FR 193
G ++QI P L +K G+IT + R G+ F+ AL E
Sbjct: 99 HGRHQVQIFPEVQPTLEIL-AKTFTLGVITNGNADV-----RRLGLADYFAFALCAEDLG 152
Query: 194 PYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGR-YSADDFT 252
KPDP P L +V + + VGD DD+A ++AG + G+ + AD
Sbjct: 153 IGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLP 212
Query: 253 KSNLQPDFRVSSLTEVLS 270
+ + +S L EVL+
Sbjct: 213 DAEIH---NLSQLPEVLA 227
>pdb|3HLT|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
pdb|3HLT|C Chain C, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
Length = 266
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP+ L +P E +M+GD +DDV + G L+ +TG+Y A D K N
Sbjct: 179 KPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILV-KTGKYRASDEEKIN 237
Query: 256 LQP 258
P
Sbjct: 238 PPP 240
>pdb|1ZJJ|A Chain A, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
pdb|1ZJJ|B Chain B, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
Length = 263
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
E+ MVGD L D+A K+ G ++ TG S +D KS +PD + S+ E++ L+
Sbjct: 203 EELWMVGDRLDTDIAFAKKFG-MKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261
>pdb|2HO4|A Chain A, Crystal Structure Of Protein From Mouse Mm.236127
pdb|2HO4|B Chain B, Crystal Structure Of Protein From Mouse Mm.236127
Length = 259
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSN 255
KP+ L + P E + +GD +DDV + G L+ +TG+Y A D K N
Sbjct: 179 KPEKTFFLEALRDADCAPEEAVXIGDDCRDDVDGAQNIGXLGILV-KTGKYKAADEEKIN 237
Query: 256 LQP 258
P
Sbjct: 238 PPP 240
>pdb|2C4N|A Chain A, Nagd From E.Coli K-12 Strain
Length = 250
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 190 REFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSAD 249
+ F KP P + + + E ++VGD+L+ D+ G +AG T L+ +G S D
Sbjct: 170 KPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILV-LSGVSSLD 228
Query: 250 DFTKSNLQPDFRVSSLTEV 268
D +P + S+ E+
Sbjct: 229 DIDSMPFRPSWIYPSVAEI 247
>pdb|3QGM|A Chain A, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|B Chain B, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|C Chain C, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|D Chain D, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
Length = 268
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 215 EVMMVGDSLKDDVACGKRAGAFTCLL--DETGRYSADD-FTKSNLQPDFRVSSLTEVLSI 271
+V +VGD + DVA GK GA T L+ T R + D + L+PD+ +SL + +
Sbjct: 206 DVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQXIERHGLKPDYVFNSLKDXVEA 265
Query: 272 LEA 274
LE
Sbjct: 266 LEG 268
>pdb|2CFS|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
pdb|2CFT|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase With Its Substrate
Length = 298
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL-------LDETGRYSA 248
KP P I + + P +MVGD L+ D+ G R G T L L+E Y A
Sbjct: 215 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLA 274
Query: 249 DDFTKSNLQPDFRVSSLTEVLSILE 273
+ +L P + V S+ ++ LE
Sbjct: 275 AG--QHDLVPHYYVESIADLTEGLE 297
>pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|B Chain B, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|C Chain C, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|D Chain D, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|E Chain E, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
pdb|3S6J|F Chain F, The Crystal Structure Of A Hydrolase From Pseudomonas
Syringae
Length = 233
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 31/205 (15%)
Query: 72 VFDMDGTLTVPVIDFPAMYRAVLGEDEYKRVKAEN-PTGIDILHHIESWS-----PDLQR 125
+FD+DGTLT V A ++ L AEN P +H S L R
Sbjct: 10 IFDLDGTLTDSVYQNVAAWKEAL--------DAENIPLAXWRIHRKIGXSGGLXLKSLSR 61
Query: 126 HAYQTIAD--FER------QGLDRLQ----IMPGTAQLCGFLDSKKIRRGLITR-NIKEA 172
+I D ER Q +RLQ +PG +L LD + ++ + T I A
Sbjct: 62 ETGXSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTA 121
Query: 173 -VDLFHNRFGITFSPALSREFRPY-KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230
++L + I ++R+ Y KPDP L +E +++GD++ D +A
Sbjct: 122 TINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDXLAAR 181
Query: 231 KRAGAFTCLLDETGRYSADDFTKSN 255
+ LL +G Y + ++
Sbjct: 182 RCKATGVGLL--SGGYDIGELERAG 204
>pdb|2X4D|A Chain A, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
pdb|2X4D|B Chain B, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
Length = 271
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 19/180 (10%)
Query: 98 EYKRVKAENPTGIDILHHIESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDS 157
E+ ++ NP + I ES+S +A+Q + + E+ L L A G +
Sbjct: 110 EFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLM-- 167
Query: 158 KKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVM 217
+ G + ++ A + G KP P V+ ++ +
Sbjct: 168 --LDVGPYMKALEYACGIKAEVVG--------------KPSPEFFKSALQAIGVEAHQAV 211
Query: 218 MVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277
M+GD + DV +R G L TG++ D ++ D V +L E + +L + D
Sbjct: 212 MIGDDIVGDVGGAQRCG-MRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQHAD 270
>pdb|3QNM|A Chain A, Haloalkane Dehalogenase Family Member From Bacteroides
Thetaiotaomicron Of Unknown Function
Length = 240
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 20/120 (16%)
Query: 155 LDSKKIRRGLITRNIKEAVDLFHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPN 214
L S+K R + R K+ + LS + KP P S + +
Sbjct: 135 LQSRKXRSAGVDRYFKKII--------------LSEDLGVLKPRPEIFHFALSATQSELR 180
Query: 215 EVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEA 274
E + +GDS + D+ G + T R T QP + + SL E+ ++LE
Sbjct: 181 ESLXIGDSWEADITGAHGVGXHQAFYNVTER------TVFPFQPTYHIHSLKELXNLLEG 234
>pdb|1WVI|A Chain A, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|B Chain B, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|C Chain C, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|D Chain D, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
Length = 257
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 211 VQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTE 267
V+ +E +MVGD+ D+ G + T L+ TG ++ +QPDF +SSL E
Sbjct: 196 VKRHEAIMVGDNYLTDITAGIKNDIATLLV-TTGFTKPEEVPALPIQPDFVLSSLAE 251
>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Streptococcus Thermophilus
pdb|3E58|B Chain B, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Streptococcus Thermophilus
Length = 214
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 144 IMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLF----HNRFGITFSPALS-REFRPYKPD 198
I P ++ + S+ + GL + ++K D+F NR F LS EF+ KP+
Sbjct: 90 IFPDVLKVLNEVKSQGLEIGLASSSVK--ADIFRALEENRLQGFFDIVLSGEEFKESKPN 147
Query: 199 PGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQP 258
P L VQ + +++ DS K +A G A E ++F
Sbjct: 148 PEIYLTALKQLNVQASRALIIEDSEK-GIAAGVAADV------EVWAIRDNEFGXDQSAA 200
Query: 259 DFRVSSLTEVLSIL 272
+ SLT+VL ++
Sbjct: 201 KGLLDSLTDVLDLI 214
>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Thermotoga Maritima
Length = 216
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 73/181 (40%), Gaps = 22/181 (12%)
Query: 70 GVVFDMDGTL--TVPVIDFPAMYRAV-------LGEDEYKRVKA-ENPTGIDILHHIESW 119
V+FD DG L T P+ + YR V ED ++R+ G+ IL
Sbjct: 3 AVIFDXDGVLXDTEPL--YFEAYRRVAESYGKPYTEDLHRRIXGVPEREGLPILXEALEI 60
Query: 120 SPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRN-IKEAVDL--- 175
L+ + + +R + L+ PG + F+ SK+I+ L T +EA++
Sbjct: 61 KDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRR 120
Query: 176 --FHNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRA 233
F + + + KPDP L + V P +V++ DS K V K A
Sbjct: 121 LDLEKYFDVX---VFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDS-KSGVEAAKSA 176
Query: 234 G 234
G
Sbjct: 177 G 177
>pdb|2OYC|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
pdb|2P27|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Mg2+ At 1.9 A Resolution
pdb|2P69|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Plp
Length = 306
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL-------LDETGRYSA 248
KP P I + + P + VGD L+ D+ G R G T L L+E Y A
Sbjct: 215 KPSPYXFECITENFSIDPARTLXVGDRLETDILFGHRCGXTTVLTLTGVSRLEEAQAYLA 274
Query: 249 DDFTKSNLQPDFRVSSLTEVLSILE 273
+ +L P + V S+ ++ LE
Sbjct: 275 AG--QHDLVPHYYVESIADLTEGLE 297
>pdb|2CFR|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
Length = 298
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCL-------LDETGRYSA 248
KP P I + + P + VGD L+ D+ G R G T L L+E Y A
Sbjct: 215 KPSPYXFECITENFSIDPARTLXVGDRLETDILFGHRCGXTTVLTLTGVSRLEEAQAYLA 274
Query: 249 DDFTKSNLQPDFRVSSLTEVLSILE 273
+ +L P + V S+ ++ LE
Sbjct: 275 AG--QHDLVPHYYVESIADLTEGLE 297
>pdb|4FFD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or48
Length = 234
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 159 KIRRGLITRNIKEAVDLFHNRFGITF---SPALSREFRPYKPDPGPLLHICSTWEVQPNE 215
K G+IT + E F + GI S S E +KP P V+ E
Sbjct: 115 KYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEE 174
Query: 216 VMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+ VGD+ D K G + LLD G +F + DF VS L EV+ I++
Sbjct: 175 AVYVGDNPVKDCGGSKNLGMTSILLDRKG--EKREFWD---KCDFIVSDLREVIKIVD 227
>pdb|3U26|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or48
Length = 234
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 163 GLITRNIKEAVDLFHNRFGITF---SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMV 219
G IT + E F + GI S S E +KP P V+ E + V
Sbjct: 119 GXITDSDTEQAXAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178
Query: 220 GDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
GD+ D K G + LLD G +F + DF VS L EV+ I++
Sbjct: 179 GDNPVKDCGGSKNLGXTSILLDRKG--EKREFWD---KCDFIVSDLREVIKIVD 227
>pdb|3PDW|A Chain A, Crystal Structure Of Putative P-Nitrophenyl Phosphatase
From Bacillus Subtilis
Length = 266
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 214 NEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+E +MVGD+ D+ G AG T LL TG + T +P + SLTE + +E
Sbjct: 201 SETLMVGDNYATDIMAGINAGMDT-LLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIE 259
Query: 274 A 274
Sbjct: 260 G 260
>pdb|3IB6|A Chain A, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|B Chain B, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|C Chain C, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|D Chain D, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
Length = 189
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 25/131 (19%)
Query: 123 LQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLFHNRFGI 182
L+++A +T+ ++ G + I+ TA D++ I+R L I + D +
Sbjct: 35 LRKNAKETLEKVKQLGFKQ-AILSNTATS----DTEVIKRVLTNFGIIDYFDFIY----- 84
Query: 183 TFSPALSREFRP---YKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAF--- 236
A + E +P KPD + ++ E +MVG++ + D+ RAG
Sbjct: 85 ----ASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIW 140
Query: 237 -----TCLLDE 242
CL DE
Sbjct: 141 LQNPEVCLQDE 151
>pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like
Hydrolase From Bacteroides Fragilis
Length = 225
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 83/223 (37%), Gaps = 35/223 (15%)
Query: 72 VFDMDGTLTVPVIDFPAMYRAVL--------GEDEYKRVKAENP-------TGIDILHHI 116
+FD D TL +R+VL +D KR + TGI +
Sbjct: 10 LFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDXIKRTIGKTLEESFSILTGITDADQL 69
Query: 117 ESWSPDLQRHAYQTIADFERQGLDRLQIMPGTAQLCGFLDSKKIRRGLITRNIKEAVDLF 176
ES+ R Y AD + P T L + IR G+I+ + + F
Sbjct: 70 ESF-----RQEYSKEADIYXNA--NTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSF 122
Query: 177 ------HNRFGITFSPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACG 230
+ F I + +KPDP LL + P EV+ +GDS D
Sbjct: 123 LRNHXPDDWFDIIIG---GEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAA 179
Query: 231 KRAGAFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+FT + +G +A +F D +S+L +++S+ E
Sbjct: 180 AAGVSFTGV--TSGXTTAQEF--QAYPYDRIISTLGQLISVPE 218
>pdb|1X42|A Chain A, Crystal Structure Of A Haloacid Dehalogenase Family
Protein (Ph0459) From Pyrococcus Horikoshii Ot3
Length = 232
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 185 SPALSREFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETG 244
S S E +KP P V+ E + VGD+ D K G + LLD G
Sbjct: 144 SITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGXTSILLDRKG 203
Query: 245 RYSADDFTKSNLQPDFRVSSLTEVLSILE 273
+F + DF VS L EV+ I++
Sbjct: 204 --EKREFWD---KCDFIVSDLREVIKIVD 227
>pdb|3UMG|A Chain A, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|B Chain B, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|C Chain C, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|D Chain D, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|E Chain E, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|F Chain F, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|G Chain G, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|H Chain H, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
Length = 254
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 193 RPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLL---DETGRYSAD 249
R YKPDP L + P EVM+ + D+ G T + E G + D
Sbjct: 166 RKYKPDPQAYLRTAQVLGLHPGEVMLAA-AHNGDLEAAHATGLATAFILRPVEHGPHQTD 224
Query: 250 DFTKSNLQPDFRVSSLTEVLSILEAN 275
D + D + +T++ + L A
Sbjct: 225 DLAPTG-SWDISATDITDLAAQLRAG 249
>pdb|2NO5|A Chain A, Crystal Structure Analysis Of A Dehalogenase With
Intermediate Complex
pdb|2NO5|B Chain B, Crystal Structure Analysis Of A Dehalogenase With
Intermediate Complex
Length = 240
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 191 EFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADD 250
+ + YKPDP C V PNEV V + D GK G T ++ G +
Sbjct: 156 DLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGK-FGFNTVRINRQGNPPEYE 214
Query: 251 FTKSNLQPDFRVSSLTEVLSILEAN 275
F Q V+SL+E+ +L N
Sbjct: 215 FAPLKHQ----VNSLSELWPLLAKN 235
>pdb|2O2X|A Chain A, Crystal Structure Of A Putative Had-Like Phosphatase
(Mll2559) From Mesorhizobium Loti At 1.50 A Resolution
Length = 218
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 18/85 (21%)
Query: 196 KPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAG-AFTCLLDETGRYSADDFTKS 254
KP+PG L+ + ++VGD L D A GKRAG A L+D ++
Sbjct: 137 KPNPGXLVEAGKRLALDLQRSLIVGDKLADXQA-GKRAGLAQGWLVD----------GEA 185
Query: 255 NLQPDFRV------SSLTEVLSILE 273
+QP F + S L ++L+ +E
Sbjct: 186 AVQPGFAIRPLRDSSELGDLLAAIE 210
>pdb|2NO4|A Chain A, Crystal Structure Analysis Of A Dehalogenase
pdb|2NO4|B Chain B, Crystal Structure Analysis Of A Dehalogenase
Length = 240
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 191 EFRPYKPDPGPLLHICSTWEVQPNEVMMVGDSLKDDVACGKRAGAFTCLLDETGRYSADD 250
+ + YKPDP C V PNEV V + D GK G T ++ G +
Sbjct: 156 DLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGK-FGFNTVRINRQGNPPEYE 214
Query: 251 FTKSNLQPDFRVSSLTEVLSILEAN 275
F Q V+SL+E+ +L N
Sbjct: 215 FAPLKHQ----VNSLSELWPLLAKN 235
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 239 LLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFDLI 279
L DE +AD F SNL DF ++LS L+ FD+I
Sbjct: 75 LHDELRNLTADAFNPSNLPVDFVREVTVKLLSELDEEFDVI 115
>pdb|3I76|A Chain A, The Crystal Structure Of The Orthorhombic Form Of The
Putative Had- Hydrolase Yfnb From Bacillus Subtilis
Bound To Magnesium Reveals Interdomain Movement
pdb|3I76|B Chain B, The Crystal Structure Of The Orthorhombic Form Of The
Putative Had- Hydrolase Yfnb From Bacillus Subtilis
Bound To Magnesium Reveals Interdomain Movement
pdb|3I76|C Chain C, The Crystal Structure Of The Orthorhombic Form Of The
Putative Had- Hydrolase Yfnb From Bacillus Subtilis
Bound To Magnesium Reveals Interdomain Movement
Length = 244
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 217 MMVGDSLKDDVACGKRAGAFTCLLD 241
+++GDSL D+ G+ AG TC ++
Sbjct: 179 LIIGDSLTADIKGGQLAGLDTCWMN 203
>pdb|4ASI|A Chain A, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|B Chain B, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|C Chain C, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|D Chain D, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|E Chain E, Crystal Structure Of Human Acaca C-Terminal Domain
pdb|4ASI|F Chain F, Crystal Structure Of Human Acaca C-Terminal Domain
Length = 769
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 117 ESWSPDLQRHAYQTIADFERQGL 139
+ W PD YQ I DF R+GL
Sbjct: 447 QVWFPDSAFKTYQAIKDFNREGL 469
>pdb|4F7D|A Chain A, Crystal Structure Of Ferredoxin-Nadp Reductase From
Burkholderia Thailandensis E264
pdb|4F7D|B Chain B, Crystal Structure Of Ferredoxin-Nadp Reductase From
Burkholderia Thailandensis E264
pdb|4FK8|A Chain A, Crystal Structure Of Ferredoxin-Nadp Reductase From
Burkholderia Thailandensis E264 With Bound Fad
pdb|4FK8|B Chain B, Crystal Structure Of Ferredoxin-Nadp Reductase From
Burkholderia Thailandensis E264 With Bound Fad
Length = 271
Score = 27.3 bits (59), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 235 AFTCLLDETGRYSADDFTKSNLQPDFRVSSLTEVLSILEANFD 277
+FTC D+ R++ +FT L+ D + LT SI+ N++
Sbjct: 36 SFTCTRDQALRFNNGEFTMVGLEVDGK--PLTRAYSIVSPNYE 76
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,441,519
Number of Sequences: 62578
Number of extensions: 332245
Number of successful extensions: 747
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 713
Number of HSP's gapped (non-prelim): 47
length of query: 280
length of database: 14,973,337
effective HSP length: 98
effective length of query: 182
effective length of database: 8,840,693
effective search space: 1609006126
effective search space used: 1609006126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)