BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023585
(280 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/280 (85%), Positives = 255/280 (91%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWRQRTL FTRPNL+EF+NSR IIISNVIF+NSPFWNIHPVY NVVIRYVTILAP DSP
Sbjct: 133 MWRQRTLLFTRPNLVEFVNSRGIIISNVIFRNSPFWNIHPVYSRNVVIRYVTILAPLDSP 192
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG PSS ITIRR+TGSSPFSG
Sbjct: 193 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSPFSG 252
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IAVGSETSGGV+NVL E++NLYN+GVGIH+KTNIGRGGFI+NITV+DVYMEN RKGIKIA
Sbjct: 253 IAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVYMENVRKGIKIA 312
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVGDHPDD FNPNALPVV GIT+K +WG KVQQ G IQGLKNSPFTGICLSNINL GV
Sbjct: 313 GDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGICLSNINLHGVP 372
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
GP S P KCSDVSGSA V PWPCSEL+S QTG+CS+HF
Sbjct: 373 GPRSSPWKCSDVSGSALLVSPWPCSELTSPHQTGSCSDHF 412
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/279 (83%), Positives = 255/279 (91%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWRQRTL FTRPNL+EF+NSR IIISNVIFQNSPFWNIHPVYCSNVVIR+VTILAP DSP
Sbjct: 167 MWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNIHPVYCSNVVIRFVTILAPHDSP 226
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG PSS ITIRR+TGSSPF+G
Sbjct: 227 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHITIRRITGSSPFAG 286
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IAVGSETSGGVE+VLAE+INLY++GVG+HVKTNIGRGGFIRNIT SDVYM+NARKGIKIA
Sbjct: 287 IAVGSETSGGVEHVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSDVYMKNARKGIKIA 346
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVGDHPDD +NPNALPVV GI + VWG V Q G IQGLK+SPFTGICLSNINL GV
Sbjct: 347 GDVGDHPDDNYNPNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFTGICLSNINLHGVP 406
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNH 279
GP S P KCSDVSG+A +V P+PCSEL+++ QTG+CS+H
Sbjct: 407 GPRSTPWKCSDVSGAALEVSPFPCSELATTHQTGSCSDH 445
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/278 (82%), Positives = 256/278 (92%), Gaps = 1/278 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
WRQ TL FTRPNL+EF+NSR IIISNVIF+NSPFWNIHPVYCSNVV+RYVTILAP DSPN
Sbjct: 169 WRQGTLQFTRPNLVEFVNSRDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG PSS ITIRR+TGSSPF+GI
Sbjct: 229 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSPFAGI 288
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSETSGGVENVLAEHINLYN+G+GIH+KTN GRGGFI+NIT+S VYME ARKGI+I+G
Sbjct: 289 AIGSETSGGVENVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMSHVYMEEARKGIRISG 348
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
DVGDHPDDKF+ NALP+V G+TIK+VWG KV Q+GLIQGL+NSPFT ICL +INL GV G
Sbjct: 349 DVGDHPDDKFDANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPFTDICLYDINLHGVTG 408
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNH 279
P +PP KCSDVSG A+QV PWPCSELSS+QQ G+C+N+
Sbjct: 409 PRTPPWKCSDVSGFAHQVSPWPCSELSSNQQ-GSCANY 445
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/277 (81%), Positives = 252/277 (90%), Gaps = 1/277 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWRQRTL FTRPNL+EF+NS+ IIISNVIF+NSPFWNIHPVYCSNVV+RYVTILAP DSP
Sbjct: 198 MWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSP 257
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG PS GITIRR+TGSSPF+G
Sbjct: 258 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRLTGSSPFAG 317
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSETSGGVENVLAEHINL+N+GVGIH+KTN GRGG I+NITV+ VY+ENAR+GIKIA
Sbjct: 318 IAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIA 377
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPD+KFNPNALPVV GITIK+VWG +V Q+GLI GL+NSPFT +CLSNIN G+
Sbjct: 378 GDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQAGLIHGLRNSPFTDVCLSNINFHGMR 437
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
GP SP KCSDV G A+QV PWPCS+L SSQ+ G+C+
Sbjct: 438 GPRSPSWKCSDVFGFAHQVSPWPCSQL-SSQEPGSCA 473
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/277 (81%), Positives = 252/277 (90%), Gaps = 1/277 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWRQRTL FTRPNL+EF+NS+ IIISNVIF+NSPFWNIHPVYCSNVV+RYVTILAP DSP
Sbjct: 166 MWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSP 225
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG PS GITIRRVTGSSPF+G
Sbjct: 226 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRVTGSSPFAG 285
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSETSGGVENVLAEHINL+N+GVGIH+KTN GRGG I+NITV+ VY+ENAR+GIKIA
Sbjct: 286 IAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQGIKIA 345
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPD+KFNPNALPVV GITIK+VWG KV Q+GLI GL+NSPFT +CLS+IN G+
Sbjct: 346 GDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQAGLIHGLRNSPFTDVCLSDINFHGME 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
GP SP KCSDV G A+QV PWPCS+L SSQ+ G+C+
Sbjct: 406 GPRSPSWKCSDVFGFAHQVSPWPCSQL-SSQEPGSCA 441
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/278 (81%), Positives = 247/278 (88%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWRQRTL FTRPNLIE +NSR+IIISNVIF++SPFWNIHPVYC NVV+++VTILAP DSP
Sbjct: 168 MWRQRTLQFTRPNLIELINSRNIIISNVIFRDSPFWNIHPVYCRNVVVQFVTILAPHDSP 227
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG PSSGITIRR+TGSSPF+G
Sbjct: 228 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRRITGSSPFAG 287
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IAVGSETSGGV+NV AEHINLYN+GVGIH+KTNIGRGG IRNITVS+VYME AR GIKIA
Sbjct: 288 IAVGSETSGGVQNVFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTGIKIA 347
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVGDHPDD FNPNALPVV G+ I+DVWG V Q G I GLKNSPFTGICLS INL G
Sbjct: 348 GDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINLHGKI 407
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
P + P KCSDVSG+A V PWPCSEL+S QTG+CS+
Sbjct: 408 KPGTAPWKCSDVSGAAVGVSPWPCSELTSPGQTGSCSS 445
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/282 (77%), Positives = 252/282 (89%), Gaps = 3/282 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR+RTL FTRPNL+EF+NS+ IIISNVIF++SPFWNIHPVYCSNVVIR+ TILAP DSP
Sbjct: 170 MWRKRTLQFTRPNLVEFVNSKDIIISNVIFKDSPFWNIHPVYCSNVVIRFATILAPRDSP 229
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG SS ITIRRV+GSSPF+G
Sbjct: 230 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIRRVSGSSPFAG 289
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IAVGSETSGGVEN+LAEHINLYN+G+GIH+KTNIGRGG+I+NI VS+VY+ENARKGIKI+
Sbjct: 290 IAVGSETSGGVENILAEHINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKGIKIS 349
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVGDH DDK++ NALP+V GIT+ +VWG KV Q+GLI+G+K+SPFT ICLS+INL GV
Sbjct: 350 GDVGDHADDKYDSNALPIVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVN 409
Query: 241 GPTS--PPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
G S P +CSDVSG A QV PWPCSEL S Q G+C+N++
Sbjct: 410 GTRSRTPSWQCSDVSGVALQVSPWPCSEL-ISHQLGSCANYY 450
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/280 (75%), Positives = 245/280 (87%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR TL +TRP+L+EF+NS +IIISNV+F NSPFWNIHPVYC NVV+RYVTILAP DSP
Sbjct: 166 MWRTGTLKYTRPSLVEFVNSYNIIISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPRDSP 225
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG+DPDSS+NVCIEDSYISTGDDLVAVKSGWDEYGIAYG S ITIRR++GSSPF+G
Sbjct: 226 NTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSPFAG 285
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+AVGSE SGGV NVLAEH+N Y++GVGI++KTNIGRGGFI+NITVS+VYMEN+RKG+KIA
Sbjct: 286 VAVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIA 345
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD GDHPDDKF+PNALP+V ITIK++WG VQQ+G I GL++SPFTGICLSNINL+G
Sbjct: 346 GDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGAT 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
P S P CS VSG+A V PWPCSEL+S+ Q G CS++F
Sbjct: 406 RPRSVPWTCSYVSGAASLVSPWPCSELTSTDQDGLCSDNF 445
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/280 (72%), Positives = 239/280 (85%), Gaps = 1/280 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR RTL +TRPNLIEF +S+ IIISNVIFQNSPFWNIHPVYCSNVVI +VTILAP DSP
Sbjct: 166 MWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSP 225
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSS NVCIEDSYISTGDDLVA+KSGWD+YGIAYG PSS ITIRR+TGSSPF+G
Sbjct: 226 NTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSPFAG 285
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSETSGG++N++AEHI L N+GVG+++KTNIGRGG+I+NI +SDVY++ A+ GIKIA
Sbjct: 286 IAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYGIKIA 345
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD GDHPD+ +NPNALPVV GI IK+VWG V+ +G IQGLK SPFTGICLS INL G
Sbjct: 346 GDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSL 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
+ KCSDVSG++ +V PWPCSEL ++ + CS+ F
Sbjct: 406 N-SYKTWKCSDVSGTSLKVSPWPCSELRTTGGSNLCSSTF 444
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/256 (78%), Positives = 228/256 (89%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
W+QRTL FTRPNL+EF+NSR IIISNVIF++SPFWNIHP CSNVV+RYVTILAP DSPN
Sbjct: 190 WKQRTLQFTRPNLVEFVNSRDIIISNVIFKSSPFWNIHPFLCSNVVVRYVTILAPRDSPN 249
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGIDP SSSNVCIEDSYISTGDDLVA KSGWDEYGI YG PSS ITIRRVTGSSPF+GI
Sbjct: 250 TDGIDPHSSSNVCIEDSYISTGDDLVAEKSGWDEYGIVYGRPSSDITIRRVTGSSPFAGI 309
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSETSGGVENVL+EHINLYN+G+GIH+KTN GR G+I+NIT+S VYME ARKGI+I+G
Sbjct: 310 AIGSETSGGVENVLSEHINLYNMGIGIHIKTNTGRAGYIKNITMSHVYMEEARKGIRISG 369
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
DVGDHPDDK++PNALP+V G+TIK+VWG KV Q+GLIQGL + PF IC +INL GV G
Sbjct: 370 DVGDHPDDKYDPNALPLVKGVTIKNVWGVKVLQAGLIQGLSSXPFRDICQYDINLHGVTG 429
Query: 242 PTSPPLKCSDVSGSAY 257
P +PP KC+DVSG A+
Sbjct: 430 PRTPPWKCTDVSGFAH 445
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/280 (72%), Positives = 239/280 (85%), Gaps = 1/280 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR RTL +TRPNLIEF +S+ IIISNVIFQNSPFWNIHPVYCSNVVI +VTILAP DSP
Sbjct: 166 MWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSP 225
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSS NVCIEDSYISTGDDLVA+KSGWDEYGIAYG PSS ITIRR+TGSSPF+G
Sbjct: 226 NTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSPFAG 285
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSETSGG++N++AEHI L N+GVG+++KTNIGRGG+I+NI +SDVY++ A+ GIKIA
Sbjct: 286 IAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKIA 345
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD GDHPD+ +NPNALP+V GI IK+VWG V+ +G IQGLK SPFTGICLS INL G
Sbjct: 346 GDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSL 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
+ KCSDV G++ +V PWPCSEL ++ + +CS+ F
Sbjct: 406 N-SYKTWKCSDVIGTSLKVSPWPCSELRTTGGSYSCSSTF 444
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/280 (71%), Positives = 235/280 (83%), Gaps = 1/280 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW RTL +TRPNLIEF +S+ IIISNVIFQNSPFWNIHPVYCSNVVI +VTILAP DSP
Sbjct: 166 MWHSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSP 225
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSS NVCIEDSYISTGDDLVA+KSGWDEYGIAYG PSS ITIRR+TGSSPF+G
Sbjct: 226 NTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSPFAG 285
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSETSGG++N++AEHI L N+GVG+++KTNIGRGG+I+NI +SDVY++ A+ GIKI
Sbjct: 286 IAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYGIKIT 345
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD GDHPD+ +NPNALP+V GI IK+VWG V+ +G IQGLK SPFTGICLS INL G
Sbjct: 346 GDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINLHGSL 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
+ KCSDV G++ +V PWPCSEL ++ CS+ F
Sbjct: 406 N-SYKTWKCSDVIGTSLKVSPWPCSELRTTGGYNLCSSTF 444
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/280 (69%), Positives = 231/280 (82%), Gaps = 3/280 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR TL FTRP LIEF NS +I++S+V+ QNSPFW +HPVYCSNVV+ +VTILAP DS
Sbjct: 171 MWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHHVTILAPTDSY 230
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY PS ITIRR+TGSSPF+G
Sbjct: 231 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSPFAG 290
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSETSGG++NV E+I LYN G+GIH+KTNIGRGG I+ IT+S VY+E R GIKI+
Sbjct: 291 IAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKIS 350
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD GDHPDDKFN +ALP+V GITIK+VWG KV+++G++QGLK+SPFT +C SN+ L G
Sbjct: 351 GDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTK 410
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELS-SSQQTGACSNH 279
SP KCSDV G+A +V P PC ELS ++QQ G+C N
Sbjct: 411 --RSPIWKCSDVVGAADKVNPTPCPELSATTQQGGSCENQ 448
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/278 (67%), Positives = 234/278 (84%), Gaps = 2/278 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR+RTLPFTRP+L+E ++S +IISNV+FQ+SPFWNIHPVYCSNVVI VT+LAP DSP
Sbjct: 199 MWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSP 258
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDL+++KSGWDEYGIA+G PSSGITIRR+TGS PF+G
Sbjct: 259 NTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGPFAG 318
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVENV EH+N + +GVGIHVKTN GRGGFIRNITVS+V + AR G++IA
Sbjct: 319 FAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIA 378
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPD ++P+ LPVV+G+TIK+VWG ++Q+GL++G+++S F+ ICLSN+ L G
Sbjct: 379 GDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYG-- 436
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
G + P KC VSG A V+P PC+EL+S+ + C+N
Sbjct: 437 GDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFCTN 474
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/280 (68%), Positives = 231/280 (82%), Gaps = 3/280 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR TL FTRP LIEF NS +I++S+V+ QNS FW +HPVYCSNVV+ +VTILAP DS
Sbjct: 171 MWRHGTLEFTRPGLIEFKNSTNIVVSHVVLQNSAFWTLHPVYCSNVVVHHVTILAPTDSF 230
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY PS ITIRR+TGSSPF+G
Sbjct: 231 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIRRITGSSPFAG 290
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSETSGG++NV E+I LYN G+GIH+KTNIGRGG I+ IT+S VY+E R GIKI+
Sbjct: 291 IAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTGIKIS 350
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD GDHPDDKFN +ALP+V GITIK+VWG KV+++G++QGLK+SPFT +C SN+ L G
Sbjct: 351 GDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTLTGTK 410
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGACSNH 279
++P KCSDV G+A +V P PC EL +++QQ G+C N
Sbjct: 411 --STPIWKCSDVVGAASKVNPTPCPELTTTTQQGGSCENQ 448
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/278 (67%), Positives = 234/278 (84%), Gaps = 2/278 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR+RTLPFTRP+L+E ++S +IISNV+FQ+SPFWNIHPVYCSNVVI VT+LAP DSP
Sbjct: 173 MWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSP 232
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDL+++KSGWDEYGIA+G PSSGITIRR+TGS PF+G
Sbjct: 233 NTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGPFAG 292
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVENV EH+N + +GVGIHVKTN GRGGFIRNITVS+V + AR G++IA
Sbjct: 293 FAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIA 352
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPD ++P+ LPVV+G+TIK+VWG ++Q+GL++G+++S F+ ICLSN+ L G
Sbjct: 353 GDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYG-- 410
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
G + P KC VSG A V+P PC+EL+S+ + C+N
Sbjct: 411 GDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFCTN 448
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/278 (67%), Positives = 234/278 (84%), Gaps = 2/278 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR+RTLPFTRP+L+E ++S +IISNV+FQ+SPFWNIHPVYCSNVVI VT+LAP DSP
Sbjct: 173 MWRKRTLPFTRPHLLELISSTDVIISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPHDSP 232
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDL+++KSGWDEYGIA+G PSSGITIRR+TGS PF+G
Sbjct: 233 NTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGPFAG 292
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVENV EH+N + +GVGIHVKTN GRGGFIRNITVS+V + AR G++IA
Sbjct: 293 FAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYGLRIA 352
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPD ++P+ LPVV+G+TIK+VWG ++Q+GL++G+++S F+ ICLSN+ L G
Sbjct: 353 GDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKLYG-- 410
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
G + P KC VSG A V+P PC+EL+S+ + C+N
Sbjct: 411 GDSVGPWKCRAVSGGALDVQPSPCAELTSTSEMSFCTN 448
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/278 (67%), Positives = 234/278 (84%), Gaps = 2/278 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++RTLPFTRP+L+E M S +++SNV+FQ+SPFWNIHPVYCSNVVI VT+LAP DSP
Sbjct: 164 MWKKRTLPFTRPHLLELMYSTDVVVSNVVFQDSPFWNIHPVYCSNVVIANVTVLAPHDSP 223
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGID DSSSNVCIEDSYIS GDDL+++KSGWDEYGIA+G PSSGITIRR+TGS PF+G
Sbjct: 224 NTDGIDLDSSSNVCIEDSYISAGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGPFAG 283
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVENVL EH+NL+ +GVGIH+KTN GRGGFIRNITVS+V + AR G++IA
Sbjct: 284 FAVGSETSGGVENVLVEHLNLFGMGVGIHIKTNSGRGGFIRNITVSEVTLNGARYGLRIA 343
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPD +NP+ LPVVN +TIK+V G ++Q+GLI+G++NS F+ ICLSN+ L G A
Sbjct: 344 GDVGGHPDASYNPSVLPVVNSVTIKNVLGQNIRQAGLIRGIRNSVFSNICLSNVKLYGSA 403
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
+ P KC VSG+A V+P PC+EL+S+ +TG C++
Sbjct: 404 --SIGPWKCRAVSGAALDVQPSPCTELASTSETGFCTS 439
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/280 (67%), Positives = 229/280 (81%), Gaps = 2/280 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW+ RTL +TRP+L+E M+S II+SNV+FQ+SPFWNIHPVYCSNVVIR VTILAP DSP
Sbjct: 169 MWKNRTLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPHDSP 228
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSN+CIED YISTGDD +A+KSGWDEYGIAYG SSGIT+RR+TGSSPF+G
Sbjct: 229 NTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRRITGSSPFAG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVENVLAEH+N +N G GIHVKTN GRGGFIRNITVSDV ++N R G++I
Sbjct: 289 FAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIV 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG+HPDD +N +ALP+V+ +T+K+V G V+++GLI+G+ NS F+ ICLSN+ G
Sbjct: 349 GDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTG-- 406
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
G P KC VSG A V+P PC+EL+S+ T C+N
Sbjct: 407 GAPVRPWKCEAVSGGALDVQPSPCTELTSTSGTSFCTNSL 446
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/280 (67%), Positives = 231/280 (82%), Gaps = 2/280 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++ TLPFTRP+L+E M+S + I+SN++FQ+SPFWNIHPVYCSNVVIR +TILAP DSP
Sbjct: 173 MWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPHDSP 232
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIED YISTGDDL+A+KSGWDEYGIAYG PSS ITIRR+TGSSPF+G
Sbjct: 233 NTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSPFAG 292
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+VGSETSGGVENVLAEH+N Y+ G G+H+KTN GRGGFIRNITVSDV ++N R G++IA
Sbjct: 293 FSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIA 352
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPD+++N NALP+V+ + IK+V G ++++GLI+G+ NS F+ ICLSNI L G A
Sbjct: 353 GDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLHGSA 412
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
P P KC VSG A V+P PC+EL+S C+N
Sbjct: 413 -PVR-PWKCQAVSGGALDVQPSPCTELTSMSGMSFCTNSL 450
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/280 (67%), Positives = 231/280 (82%), Gaps = 2/280 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++ TLPFTRP+L+E M+S + I+SN++FQ+SPFWNIHPVYCSNVVIR +TILAP DSP
Sbjct: 173 MWKKGTLPFTRPHLLELMDSSNAIVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPHDSP 232
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIED YISTGDDL+A+KSGWDEYGIAYG PSS ITIRR+TGSSPF+G
Sbjct: 233 NTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSPFAG 292
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+VGSETSGGVENVLAEH+N Y+ G G+H+KTN GRGGFIRNITVSDV ++N R G++IA
Sbjct: 293 FSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYGLRIA 352
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPD+++N NALP+V+ + IK+V G ++++GLI+G+ NS F+ ICLSNI L G A
Sbjct: 353 GDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKLHGSA 412
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
P P KC VSG A V+P PC+EL+S C+N
Sbjct: 413 -PVR-PWKCQAVSGGALDVQPSPCTELTSMSGMSFCTNSL 450
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/280 (66%), Positives = 231/280 (82%), Gaps = 2/280 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++ TL +TRP+L+E M+S II+SNV+FQ+SPFWNIHPVYCSNVVIR VTILAP DSP
Sbjct: 170 MWKKGTLLYTRPHLLELMSSSHIIVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPHDSP 229
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSN+CIED YISTGDD +A+KSGWDEYGIAYG PSS IT+RR+TGSSPF+G
Sbjct: 230 NTDGIDPDSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRRITGSSPFAG 289
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVENVLAEH+N ++ G GIH+KTN GRGGFIRN+TVSDV ++N R G++I
Sbjct: 290 FAVGSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIV 349
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG+HPD+++N +ALP+V+ +TIK+V G ++++GLI+G+ NS F+ ICLSN+ L G
Sbjct: 350 GDVGNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKLTG-- 407
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
G P KC VSG A V+P PC+EL+S+ T C+N
Sbjct: 408 GAPVQPWKCEAVSGGALDVQPSPCTELTSTSGTSFCTNSL 447
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/280 (66%), Positives = 231/280 (82%), Gaps = 2/280 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++ TLPFTRP+L+E M+S +I+SN++F++SPFWNIHPVYCSNVVIR +TILAP DSP
Sbjct: 171 MWKKGTLPFTRPHLLELMDSSDVIVSNLVFRDSPFWNIHPVYCSNVVIRNLTILAPHDSP 230
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIED YISTGDDLVA+KSGWDEYGIAYG PSS IT+RR+TGSSPF+G
Sbjct: 231 NTDGIDPDSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRRITGSSPFAG 290
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVENVLAEH+N ++ G G+H+KTN GRGGFIRN+TVSDV ++N R G++IA
Sbjct: 291 FAVGSETSGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTLDNVRYGLRIA 350
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVGDHPD+ +N NALP V+ +TIK+V G ++++G I+G+ +S F+ ICLSNI L G
Sbjct: 351 GDVGDHPDEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRICLSNIKLHGSV 410
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
P P KC VSG A ++P PC+EL+S+ T C+N
Sbjct: 411 -PVR-PWKCESVSGGALDLQPSPCTELTSTSGTSFCTNSL 448
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/277 (67%), Positives = 225/277 (81%), Gaps = 2/277 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWRQRTL TRPNL+EFM+S I ISN++ +NSPFWNIHPVYC NVVI + I+AP DSP
Sbjct: 168 MWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNMMIIAPHDSP 227
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG+DPDSS+NVCIEDSYISTGDDLVA+KSGWDEYGIAYG PSSGITIRRV GSSPFSG
Sbjct: 228 NTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSPFSG 287
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGGV +VL E +++N G GIH+KTNIGRGGFIRNITV +V M + R G++IA
Sbjct: 288 IAIGSEASGGVSDVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIA 347
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVGDHPD+ F+ ALP V+G++IK+VWG VQQ G I+G++NSPFT ICL+N+ L G
Sbjct: 348 GDVGDHPDEHFSQLALPTVDGVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWR 407
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
+ KC DV G+A V+P PC+EL++S +G CS
Sbjct: 408 --NNAAWKCRDVHGAALGVQPGPCAELTTSLSSGFCS 442
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/277 (67%), Positives = 224/277 (80%), Gaps = 2/277 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWRQRTL TRPNL+EFM+S I ISN++ +NSPFWNIHPVYC NVVI + I+AP DSP
Sbjct: 168 MWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNMMIIAPHDSP 227
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG+DPDSS+NVCIEDSYISTGDDLVA+KSGWDEYGIAYG PSSGITIRRV GSSPFSG
Sbjct: 228 NTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSPFSG 287
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGGV NVL E +++N G GIH+KTNIGRGGFIRNITV +V M + R G++IA
Sbjct: 288 IAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIA 347
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVGDHPD+ F+ ALP V+ ++IK+VWG VQQ G I+G++NSPFT ICL+N+ L G
Sbjct: 348 GDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWR 407
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
+ KC DV G+A V+P PC+EL++S +G CS
Sbjct: 408 --NNAAWKCRDVHGAALGVQPGPCAELTTSLSSGFCS 442
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/277 (63%), Positives = 229/277 (82%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++RTLPFTRP+L+E M S +++SN++FQ+SPFWNIHPVYCSNVVI +T+LAP DSP
Sbjct: 170 MWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSP 229
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGID DSSSNVC+ED YIS GDDL+++KSGWDEYG+A+G PSSGIT+RR+TGS PF+G
Sbjct: 230 NTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGPFAG 289
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVE+V+AEH++ VGVG+HVKTN GRGGFIRN+TVS V ++ AR G++IA
Sbjct: 290 FAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIA 349
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HP +N + LPVV+G+ +++VWG V+Q+GLI+G+++S F+ ICLSN+ L G+
Sbjct: 350 GDVGGHPGASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKLYGIG 409
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
+ P +C VSGSA V+P PC+EL+S+ TG C+
Sbjct: 410 SDSIGPWRCRAVSGSALDVQPSPCAELASTSGTGFCT 446
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 174/277 (62%), Positives = 229/277 (82%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++RTLPFTRP+L+E M S +++SN++FQ+SPFWNIHPVYCSNVVI +T+LAP DSP
Sbjct: 182 MWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSP 241
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGID DSSSNVC+ED YIS GDDL+++KSGWDEYG+A+G PSSGIT+RR+TGS PF+G
Sbjct: 242 NTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGPFAG 301
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVE+V+AEH++ VGVG+HVKTN GRGGFIRN+TVS V ++ AR G++IA
Sbjct: 302 FAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYGLRIA 361
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HP +N + LPV++G+ +++VWG V+Q+GLI+G+++S F+ ICLSN+ L G+
Sbjct: 362 GDVGGHPGASYNASLLPVIDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKLYGIG 421
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
+ P +C VSGSA V+P PC+EL+S+ TG C+
Sbjct: 422 SDSIGPWRCRAVSGSALDVQPSPCAELASTSGTGFCT 458
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/280 (66%), Positives = 232/280 (82%), Gaps = 2/280 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++ TLPFTRP+L+E MNS +++SNV+FQ+SPFWNIHPVYCSNVVIR VT+LAP DSP
Sbjct: 168 MWKKGTLPFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSP 227
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIED YISTGDDL+A+KSGWDEYG+AYG PSS ITIRR+TGSSPF+G
Sbjct: 228 NTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPFAG 287
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVE+VLAEH+N ++ G GIH+KTN GRGGFIRN+TVSDV +++ R G++IA
Sbjct: 288 FAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIA 347
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPDD+++ NALPVV+G+TIK+V G ++++G I+G+ S F+ ICLSN+ L G
Sbjct: 348 GDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNG-- 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
G P KC VSG+A V+P PC+EL+S+ C+N
Sbjct: 406 GAAVRPWKCEAVSGAALDVQPSPCTELTSTSGMSFCTNSL 445
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/278 (66%), Positives = 232/278 (83%), Gaps = 2/278 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++ TLPFTRP+L+E MNS +++SNV+FQ+SPFWNIHPVYCSNVVIR VT+LAP DSP
Sbjct: 31 MWKKGTLPFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSP 90
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIED YISTGDDL+A+KSGWDEYG+AYG PSS ITIRR+TGSSPF+G
Sbjct: 91 NTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPFAG 150
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVE+VLAEH+N ++ G GIH+KTN GRGGFIRN+TVSDV +++ R G++IA
Sbjct: 151 FAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIA 210
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPDD+++ NALPVV+G+TIK+V G ++++G I+G+ S F+ ICLSN+ L G
Sbjct: 211 GDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNG-- 268
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
G P KC VSG+A V+P PC+EL+S+ C+N
Sbjct: 269 GAAVRPWKCEAVSGAALDVQPSPCTELTSTSGMSFCTN 306
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 172/270 (63%), Positives = 213/270 (78%), Gaps = 2/270 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR+RTL TRPNL+EFM+S I ISN++ +NSPFWNIHPVYC NVV+ + ILAP DSP
Sbjct: 175 MWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNMMILAPRDSP 234
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG+DPDSSSNVCIEDSYISTGDDLVA+KSGWDEYGIAYG PS+G+T+RRV GSSPFSG
Sbjct: 235 NTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSPFSG 294
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGGV +VL E +++ G GIH+KTN+GRGG+IRN+TV V + R G++IA
Sbjct: 295 IAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIA 354
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVGDHPD F+ A+P V+ + I +VWG VQQ G ++G++ SPFT ICLSN+ L G
Sbjct: 355 GDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLFGWR 414
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
+ KC DV G+A V+P PC+EL++S
Sbjct: 415 --SDAAWKCRDVRGAALGVQPSPCAELATS 442
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 172/270 (63%), Positives = 213/270 (78%), Gaps = 2/270 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR+RTL TRPNL+EFM+S I ISN++ +NSPFWNIHPVYC NVV+ + ILAP DSP
Sbjct: 71 MWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNMMILAPRDSP 130
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG+DPDSSSNVCIEDSYISTGDDLVA+KSGWDEYGIAYG PS+G+T+RRV GSSPFSG
Sbjct: 131 NTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSPFSG 190
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGGV +VL E +++ G GIH+KTN+GRGG+IRN+TV V + R G++IA
Sbjct: 191 IAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSGVRIA 250
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVGDHPD F+ A+P V+ + I +VWG VQQ G ++G++ SPFT ICLSN+ L G
Sbjct: 251 GDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKLFGWR 310
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
+ KC DV G+A V+P PC+EL++S
Sbjct: 311 --SDAAWKCRDVRGAALGVQPSPCAELATS 338
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 176/278 (63%), Positives = 217/278 (78%), Gaps = 2/278 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWR+RTL TRPNL+EFM+S I ISN++ +NSPFWNIHPVYC NVV+ + ILAP DSP
Sbjct: 170 MWRRRTLEHTRPNLVEFMHSTGIHISNIVLKNSPFWNIHPVYCDNVVVTNMMILAPHDSP 229
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDSYISTGDDLVA+KSGWDEYGIAYG PSSGITIRRV GSSPFSG
Sbjct: 230 NTDGIDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSPFSG 289
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-KGIKI 179
IA+GSE SGGV +VL E ++++ G GIH+KTN+GRGG+IRN+TV +V M R G++I
Sbjct: 290 IAIGSEASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRMSGVRISGVRI 349
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
AGDVGDHPD F+ A+P+V+ + I +VWG VQ G ++G+++SPFT ICLSN+ L G
Sbjct: 350 AGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRICLSNVKLFGW 409
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
+C DV G+A V+P PC+EL++S + S
Sbjct: 410 R-KNDAAWRCRDVRGAALGVQPSPCAELATSFASAGSS 446
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 207/249 (83%), Gaps = 2/249 (0%)
Query: 30 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 89
FQ+SPFWNIHPVYCSNVVIR VT+LAP DSPNTDGIDPDSSSNVCIED YISTGDDL+A+
Sbjct: 13 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 72
Query: 90 KSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 149
KSGWDEYG+AYG PSS ITIRR+TGSSPF+G AVGSETSGGVE+VLAEH+N ++ G GIH
Sbjct: 73 KSGWDEYGMAYGRPSSHITIRRITGSSPFAGFAVGSETSGGVEHVLAEHLNFFSSGFGIH 132
Query: 150 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 209
+KTN GRGGFIRN+TVSDV +++ R G++IAGDVG HPDD+++ NALPVV+G+TIK+V G
Sbjct: 133 IKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQG 192
Query: 210 TKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 269
++++G I+G+ S F+ ICLSN+ L G G P KC VSG+A V+P PC+EL+S
Sbjct: 193 QNIREAGSIKGIATSAFSRICLSNVKLNG--GAAVRPWKCEAVSGAALDVQPSPCTELTS 250
Query: 270 SQQTGACSN 278
+ C+N
Sbjct: 251 TSGMSFCTN 259
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/278 (58%), Positives = 208/278 (74%), Gaps = 28/278 (10%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++ TLPFTRP+L+E MNS +++SNV+FQ+SPFWNIHPVYCS
Sbjct: 168 MWKKGTLPFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCS---------------- 211
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
SNVCIED YISTGDDL+A+KSGWDEYG+AYG PSS ITIRR+TGSSPF+G
Sbjct: 212 ----------SNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPFAG 261
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
AVGSETSGGVE+VLAEH+N ++ G GIH+KTN GRGGFIRN+TVSDV +++ R G++IA
Sbjct: 262 FAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIA 321
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GDVG HPDD+++ NALPVV+G+TIK+V G ++++G I+G+ S F+ ICLSN+ L G
Sbjct: 322 GDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNG-- 379
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
G P KC VSG+A V+P PC+EL+S+ C+N
Sbjct: 380 GAAVRPWKCEAVSGAALDVQPSPCTELTSTSGMSFCTN 417
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 312 bits (800), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 154/180 (85%), Positives = 167/180 (92%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MWRQ LPFTRPNL+EFMNSR IIISNVIF+NSPFWNI PVYCSNVVIRYVTILAP DSP
Sbjct: 33 MWRQGNLPFTRPNLVEFMNSRGIIISNVIFKNSPFWNIPPVYCSNVVIRYVTILAPTDSP 92
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSSSNVCIEDS+ISTGDDLVAVKSGWDEYGI YG PSS ITIRRVTGSSPF+G
Sbjct: 93 NTDGIDPDSSSNVCIEDSFISTGDDLVAVKSGWDEYGIGYGRPSSHITIRRVTGSSPFAG 152
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IAVGSETSGGVE+VLAE+I +YN G+G+++KTNIGRGGFI+NITVS V+MEN R GIKIA
Sbjct: 153 IAVGSETSGGVEHVLAENIVIYNSGIGVNIKTNIGRGGFIKNITVSPVFMENVRTGIKIA 212
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 302 bits (774), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/281 (53%), Positives = 196/281 (69%), Gaps = 4/281 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
M+R +TL +TRP+L+E MNS ++ISN+ F NSPFW IHPVYCS V ++ VTILAP DSP
Sbjct: 168 MFRNKTLDYTRPHLVELMNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPLDSP 227
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDSS +VCIED YISTGDDL+A+KSGWDEYGIA+G PS+ I I R+ G + S
Sbjct: 228 NTDGIDPDSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSA 287
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GIA+GSE SGGV +V AE I+ Y+ I +KT+ GRGG++RNI V+++ + N I+
Sbjct: 288 GIAIGSEMSGGVSDVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRF 347
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G GDHPDD ++PNALPV+ ITI+DV G + ++GLI+G++ F ICLSNI L
Sbjct: 348 TGSYGDHPDDAYDPNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNITLN-- 405
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
++ P CS++ G + V P C L CS+ +
Sbjct: 406 -VSSNYPWNCSNIRGYSDMVFPEACEPLKERIFPDHCSDCY 445
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/278 (51%), Positives = 205/278 (73%), Gaps = 3/278 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E MNS +I+ISN+ F+NSPFW IHPVYCSNVV++ +TILAP ++P
Sbjct: 203 LWWNRTLEHTRGHLVELMNSHNILISNLTFRNSPFWTIHPVYCSNVVVKDMTILAPLNAP 262
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS I +RRV+G++P S
Sbjct: 263 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGTTPTCS 322
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ NV+ + +++++ G+ +KT+IGRGG+I NIT+ ++ ME + I+
Sbjct: 323 GVGIGSEMSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVKIPIRF 382
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPD++++PNA+PVV G++I +V ++ ++QG+K++PF GIC+ N+ L G+
Sbjct: 383 SRGSNDHPDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNVTLVGL 442
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
A TS C VSG A +V P PC +L ++ + CS
Sbjct: 443 ASSTS--WHCEFVSGFANEVFPMPCPQLQNNDSSSWCS 478
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/276 (55%), Positives = 190/276 (68%), Gaps = 3/276 (1%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
R+L +TRP+L+E MNS ++ISN+ F NSPFW IHPVYCS V ++ V ILAP DSPNTDG
Sbjct: 172 RSLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDG 231
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
IDPDSS NVCIED YISTGDDL+A+KSGWDEYGIAYG PS+ I I R+ G + SGIA+G
Sbjct: 232 IDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGRTQTSGIAIG 291
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 184
SE SGGV V AE I Y+ I +KT+ GRGG++RNI VS+V + N I G G
Sbjct: 292 SEMSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTLANVDIAITFTGLYG 351
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
+HPDD +NPNALPV+ ITIKDV G ++ +GLI+G++ F ICLSNI L + +
Sbjct: 352 EHPDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNICLSNIILNVTS---N 408
Query: 245 PPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
P CS V G + V+P C L G CS+ +
Sbjct: 409 YPWNCSYVKGYSDLVQPEACEPLKERIFPGHCSDCY 444
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/276 (55%), Positives = 190/276 (68%), Gaps = 3/276 (1%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
RTL +TRP+L+E MNS ++ISN+ F NSPFW IHPVYCS V ++ V ILAP DSPNTDG
Sbjct: 172 RTLDYTRPHLVELMNSTGVLISNLTFLNSPFWTIHPVYCSQVTVQNVRILAPHDSPNTDG 231
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
IDPDSS NVCIED YISTGDDL+A+KSGWDEYGIAYG PS+ I I R+ G + SGIA+G
Sbjct: 232 IDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGKTQTSGIAIG 291
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 184
SE SGGV V AE I Y+ GI +KT+ GRGG++RNI VS+V + N I G G
Sbjct: 292 SEMSGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLANVDIAIWFTGSYG 351
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
+HPDD ++PNALPV+ +TIKDV G ++ +GLI+G++ F ICLSNI L + +
Sbjct: 352 EHPDDAYDPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNICLSNIILNVTS---N 408
Query: 245 PPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
P CS V G + V+P C L CS+ +
Sbjct: 409 YPWNCSYVKGYSDLVQPEACEPLKERIFPDHCSDCY 444
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/193 (77%), Positives = 166/193 (86%), Gaps = 1/193 (0%)
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DGIDPDSSS+VCIEDSYISTGDDLVAVKSGWD+YGI Y PS+ ITIRR+TGSSPF+GIA
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSPFAGIA 60
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD 182
+GSETSGGV NVLAEHI L N+G+GIH+KTNIGRGG IRNITVSDVYM N RKGIKI+ D
Sbjct: 61 IGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISAD 120
Query: 183 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG-VAG 241
VGDHPD +NPNALPV+ + IK+VWG KVQQ+GLI GLKNSPFT ICLSNINLQG +
Sbjct: 121 VGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPIIS 180
Query: 242 PTSPPLKCSDVSG 254
+ P KCS VSG
Sbjct: 181 TRNVPWKCSYVSG 193
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 188/269 (69%), Gaps = 3/269 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R TL +TRP+L+E MN+ ++ISN+ F NSPFW IHPVYCS V+++ VTILAP DSPN
Sbjct: 162 FRNETLDYTRPHLVELMNTTGVVISNLTFLNSPFWTIHPVYCSQVIVQNVTILAPLDSPN 221
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGIDPDSS +VCIED YISTGDD++A+KSGWDEYG +Y PS ITIR + G + +GI
Sbjct: 222 TDGIDPDSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNITIRGLVGQTTSAGI 281
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSE SGGV V AE++ YN GI +KT GRGG++RNI +S++ + + + I+ G
Sbjct: 282 AIGSEMSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISNMSLTDVKTAIRFTG 341
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
GDHPD+ ++P ALP++ ITI DV G V+ +GL++GL+ F ICLSNINL +
Sbjct: 342 QYGDHPDESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFLDICLSNINL---SV 398
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
+ P CS + G + V P C L +
Sbjct: 399 TSKSPWNCSYIQGYSEAVSPEICEPLRET 427
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/266 (51%), Positives = 191/266 (71%), Gaps = 3/266 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R +TL +TRP+L+EFMN+ ++ISN+ F NSPFW IHPVYCS V+++ VTILAP DSPN
Sbjct: 169 FRNQTLNYTRPHLVEFMNTTGVVISNLTFINSPFWTIHPVYCSQVIVQNVTILAPLDSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGIDPDSS +VC+ED Y+STGDD++A+KSGWDEYG++YG PS ITIRR+ G + +GI
Sbjct: 229 TDGIDPDSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRRLVGQTTSAGI 288
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSE SGGV V AE++ YN GI +KT+ GRGG++RNI +S++ + + + I G
Sbjct: 289 AIGSEMSGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSLTDVKTAISFTG 348
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
G+HPD+ ++P ALP++ IT++DV G V+ +GL++G++ F ICL NINL +
Sbjct: 349 RYGEHPDEYYDPTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDICLLNINLSVTS- 407
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSEL 267
P CS + G + V P C L
Sbjct: 408 --KSPWNCSYIQGYSDTVSPEICEPL 431
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/268 (51%), Positives = 199/268 (74%), Gaps = 3/268 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E MNS+ I+ISN+ F+NSPFW IHP+YCSN+V++ +TILAP ++P
Sbjct: 126 LWWNRTLEHTRGHLVELMNSQDILISNLTFRNSPFWTIHPIYCSNLVVKDMTILAPLNAP 185
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS I IRRV+G++P S
Sbjct: 186 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGTTPTCS 245
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ NV E +++++ G+ +KT+ GRGG+I NIT+SD+ ME + I+
Sbjct: 246 GVGIGSEMSGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVKIPIRF 305
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPD++++P A+PVV G++I ++ ++ +++G++++PF GIC+ NI+L GV
Sbjct: 306 SSGSNDHPDERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNISLLGV 365
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
+SP +C VSG A V P PC +L
Sbjct: 366 V--SSPSWRCEFVSGFANDVFPTPCPQL 391
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/266 (53%), Positives = 191/266 (71%), Gaps = 4/266 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
+++TL +TRP+L+EF+NS ++ISNV F NSPFW IHPVYCS V+I+ VTILAP DSPNT
Sbjct: 170 QKKTLNYTRPHLVEFINSTGVVISNVTFLNSPFWTIHPVYCSQVIIQNVTILAPLDSPNT 229
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GI 121
DGIDPDSS++VCIED YISTGDDL+A+KSGWDEYGI+Y PS+ I IRR+ G + S GI
Sbjct: 230 DGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRRLVGKTNSSAGI 289
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSE SGGV V AE + +N GI +KT+ GRGG++RNI +SD+ + + + I+ G
Sbjct: 290 AIGSEMSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNLVDVKIAIRFTG 349
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
G+HPD+ ++P ALP++ IT+KDV G ++ +GL++G++ F ICLSNI L +
Sbjct: 350 QYGEHPDEFYDPTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNICLSNITLNVTS- 408
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSEL 267
P CS + G + V P C L
Sbjct: 409 --ESPWNCSYIHGYSDLVSPEACEPL 432
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 143/284 (50%), Positives = 193/284 (67%), Gaps = 7/284 (2%)
Query: 1 MW----RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
MW R +TL +TRP+L+E MNS ++ISN+ F NSPFW IHP+YCS+V+++ VTI AP
Sbjct: 3 MWWERFRNKTLDYTRPHLVELMNSTGVVISNLTFLNSPFWTIHPIYCSHVIVQNVTIRAP 62
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
DSPNTDGIDPDSS +VCIED YISTGDD++A+KSGWDEYGI+YG PS I IRR+ G +
Sbjct: 63 LDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIGET 122
Query: 117 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 176
SGIA+GSE SGGV +V AE I +N GI +KT+ GRGG++RNI +S+V + N +
Sbjct: 123 HSSGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANVKVA 182
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
I+ G G+HPD+ ++P A+P + IT KD+ G + +GL++G++ F ICL NI L
Sbjct: 183 IRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYNITL 242
Query: 237 QGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
+ + P CS+V G + V P C L S C+ +
Sbjct: 243 ---SVNSISPWNCSNVQGFSSLVFPQTCELLEESIFPDHCTECY 283
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 191/277 (68%), Gaps = 3/277 (1%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+TL +TRP+L+E MNS ++ISNV F NSPFW IHPVYCS+V I+ VTI+AP SPNTD
Sbjct: 179 NKTLNYTRPHLVELMNSTGVLISNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTD 238
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GI+PDSS NVCIED YISTGDDL+++KSGWD YGI++G PS+ I IRR+ G + +GIA+
Sbjct: 239 GINPDSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTTSAGIAI 298
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
GSE SGGV V AE I +++ I +KT+ GRGG++RN+ +S++ + N I+ G
Sbjct: 299 GSEMSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIAIRFTGLY 358
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
G+HPDD ++P+ALPV+ ITIKDV G KV+ +GLIQG+K F ICLSNI L +
Sbjct: 359 GEHPDDTYDPDALPVIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITLN---VSS 415
Query: 244 SPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
P CS + G + V P C L CS+ +
Sbjct: 416 KLPWNCSYIKGFSDLVSPEACEPLKERIFPEHCSDCY 452
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 191/277 (68%), Gaps = 3/277 (1%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+TL +TRP+L+E MNS ++ISNV F NSPFW IHPVYCS+V I+ VTI+AP SPNTD
Sbjct: 179 NKTLNYTRPHLVELMNSTGVLISNVTFMNSPFWTIHPVYCSHVTIQNVTIIAPLSSPNTD 238
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GI+PDSS NVCIED YISTGDDL+++KSGWD YGI++G PS+ I IRR+ G + +GIA+
Sbjct: 239 GINPDSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKTTSAGIAI 298
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
GSE SGGV V AE I +++ I +KT+ GRGG++RN+ +S++ + N I+ G
Sbjct: 299 GSEMSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIAIRFTGLY 358
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
G+HPDD ++P+ALPV+ ITIKDV G KV+++GLIQG+K F ICLSNI L
Sbjct: 359 GEHPDDTYDPDALPVIERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITLN---VSK 415
Query: 244 SPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
P CS V G + V P C L CS+ +
Sbjct: 416 KLPWNCSYVKGYSDLVSPEACEPLRERIFPEHCSDCY 452
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/278 (50%), Positives = 201/278 (72%), Gaps = 3/278 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E MNS +I+I+N+ F N+PFW IHPVYCSNVV++ +TILAP +P
Sbjct: 160 LWWNRTLEHTRGHLVELMNSNNILIANLTFCNAPFWTIHPVYCSNVVVKDMTILAPLKAP 219
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS I +RRV+G++P S
Sbjct: 220 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRRVSGTTPTCS 279
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ N+ E +++++ G+ +KT+ GRGG+I NIT+S+V ME + I+
Sbjct: 280 GVGIGSEMSGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTMERVKVPIRF 339
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPD+ ++P A+PVV GI+I++V ++ +++G++++PF GIC+ N++L GV
Sbjct: 340 SRGSNDHPDEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGICMKNVSLLGV 399
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
+S C VSG A +V P PC +L S+ + CS
Sbjct: 400 V--SSLSWHCEFVSGFADEVFPTPCPQLQSNISSSWCS 435
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 190/277 (68%), Gaps = 1/277 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+WR RTL TR +LIE +NS +++IS+V NSPFW +HPVYCSNVV++ +TILAP D+P
Sbjct: 214 LWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTILAPLDAP 273
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI++G PS+ I I+RV+G++P S
Sbjct: 274 NTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRVSGTTPTCS 333
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ GSE SGG+ NVL ++++N + +KT++GRGG+I NIT++ V ME + I+
Sbjct: 334 GVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASVAMEKVKVPIRF 393
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPDD+++P ALP ++ + + DV G +Q++ +++ + + + GIC N + +G+
Sbjct: 394 SRGADDHPDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEGICFRNFSFRGI 453
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
C V G A+ V P PC E + C
Sbjct: 454 RRQQDSRWHCESVYGEAHDVFPAPCEEFRRDGSSSWC 490
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/268 (51%), Positives = 189/268 (70%), Gaps = 3/268 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R +TL TRP+L+E +NS ++ISN F NSPFW IHPVYCSNV ++ VTI+ P SPN
Sbjct: 299 FRNKTLDHTRPHLVELINSTEVLISNATFLNSPFWTIHPVYCSNVTVQNVTIIVPFGSPN 358
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGIDPDSS NVCIED YISTGDDL+++KSGWDEYGI++G PS+ I+I R+TG + +GI
Sbjct: 359 TDGIDPDSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISIHRLTGRTTSAGI 418
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSE SGGV V AE I +++ I +KT+ GRGG++RN+ +S++ + N I+ G
Sbjct: 419 AIGSEMSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNMTLINVDIAIRFTG 478
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
G+HPDD ++ +ALPV+ IT+ +V G ++++GLIQG+K F ICLSNI L
Sbjct: 479 LYGEHPDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVDICLSNITLN---V 535
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSELSS 269
+ P CSDV G + V P C +L+
Sbjct: 536 SKNNPWNCSDVKGYSELVSPESCEQLNE 563
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/261 (51%), Positives = 186/261 (71%), Gaps = 1/261 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +VV++ +TILAP +SPN
Sbjct: 169 FRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG-SSPFSG 120
TDG+DPDSS+NVCIED YI TGDDLV++KSGWDEYGI+Y PSS I I R+TG ++ SG
Sbjct: 229 TDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+ + +V ++N +K I+
Sbjct: 289 IAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G+HPD+KF+P ALP + IT ++V G + +GL++G+ F IC N+ L+
Sbjct: 349 GKYGEHPDEKFDPKALPAIEKITFENVNGDGIGVAGLLEGIAGDEFKNICFLNVTLRVKK 408
Query: 241 GPTSPPLKCSDVSGSAYQVKP 261
P +CS+V G + V P
Sbjct: 409 NSKKSPWECSNVRGYSQWVSP 429
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/269 (51%), Positives = 192/269 (71%), Gaps = 4/269 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP L+EFM S +++SN+ F NSPFWNIHPVYCS V+++++TILAP SPN
Sbjct: 170 FHNHTLNYTRPPLVEFMYSTRVVVSNLTFTNSPFWNIHPVYCSQVLVQHLTILAPISSPN 229
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSS+NVCIED YI GDD+V +KSGWDEYGI++ +PSS I+I+ +TG + S G
Sbjct: 230 TDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITGQTRSSAG 289
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ NV A I + N GI +KT GRGG+++N+ ++DV M+N I+I
Sbjct: 290 IALGSEMSGGISNVRAVGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNVSIAIRIT 349
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
+ G+HPDDK++ NALP+++ ITIK+V G + +G++QG++ F+ ICLSN+ L +
Sbjct: 350 ANYGEHPDDKYDKNALPIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSNVTL---S 406
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSS 269
+ P CS V G + V P C EL +
Sbjct: 407 TKSMDPWNCSLVEGYSNSVSPEICEELRT 435
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 187/261 (71%), Gaps = 1/261 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +VV++ +TILAP +SPN
Sbjct: 169 FRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG-SSPFSG 120
TDG+DPDSS+NVCIED YI TGDDLV++KSGWDEYGI+Y PSS I I R+TG ++ SG
Sbjct: 229 TDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+ + +V ++N +K I+
Sbjct: 289 IAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G+HPD+K++P ALP + IT ++V G + +GL++G++ F IC N+ L+
Sbjct: 349 GKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKK 408
Query: 241 GPTSPPLKCSDVSGSAYQVKP 261
P +CS+V G + V P
Sbjct: 409 NSKKSPWECSNVRGYSQWVSP 429
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 187/261 (71%), Gaps = 1/261 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +VV++ +TILAP +SPN
Sbjct: 168 FRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPN 227
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG-SSPFSG 120
TDG+DPDSS+NVCIED YI TGDDLV++KSGWDEYGI+Y PSS I I R+TG ++ SG
Sbjct: 228 TDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSG 287
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+ + +V ++N +K I+
Sbjct: 288 IAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKAIRFT 347
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G+HPD+K++P ALP + IT ++V G + +GL++G++ F IC N+ L+
Sbjct: 348 GKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKK 407
Query: 241 GPTSPPLKCSDVSGSAYQVKP 261
P +CS+V G + V P
Sbjct: 408 NSKKSPWECSNVRGYSQWVSP 428
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 192/274 (70%), Gaps = 4/274 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP L+E M S ++ISN+ F N+PFWNIHPVYCS V+++++TILAP SPN
Sbjct: 199 FHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPN 258
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSSSNVCIED YI GDD+V +KSGWDEYGI++ HPSS I+IR +TG + S G
Sbjct: 259 TDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAG 318
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ +V AE + N GI +KT GRGG+++NI ++DV M+N I+I
Sbjct: 319 IAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRIT 378
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDD ++ NALPV++ ITIK+V G + +G++ G++ F+ ICLSN++L +
Sbjct: 379 GNYGEHPDDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL---S 435
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 274
++ P CS + G + V P C +L S G
Sbjct: 436 SKSADPWNCSLIEGFSNSVAPEICEQLRPSPGPG 469
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/270 (52%), Positives = 187/270 (69%), Gaps = 4/270 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++ +L +TRP+L+E MNS I+ISN+ F NSPFW IHPVYCS V+++ VTI AP DSPN
Sbjct: 179 FKTESLNYTRPHLVELMNSSGIVISNLTFINSPFWTIHPVYCSKVIVQNVTIRAPLDSPN 238
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSS +VCIED +ISTGDDL+A+KSGWDEYGI YG P ITIRR+ G + S G
Sbjct: 239 TDGIDPDSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRNITIRRLVGQTRSSAG 298
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGGV V AE+I YN GI +KT+ GRGG++RNI VS+V + + I+
Sbjct: 299 IAIGSEMSGGVSEVHAENILFYNSNTGIRIKTSPGRGGYVRNIYVSNVTLNDVNIAIRFT 358
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPD+ ++P ALP++ ITI+ V G ++ +G++ G++ F ICLSNI+L +
Sbjct: 359 GNYGEHPDEHYDPKALPIIERITIEHVMGDNIKYAGILDGIEADSFVNICLSNISLNVTS 418
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
P CS + G + V P C L S
Sbjct: 419 ---KFPWNCSYIQGYSESVSPEICEPLRES 445
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 192/274 (70%), Gaps = 4/274 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP L+E M S ++ISN+ F N+PFWNIHPVYCS V+++++TILAP SPN
Sbjct: 139 FHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPN 198
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSSSNVCIED YI GDD+V +KSGWDEYGI++ HPSS I+IR +TG + S G
Sbjct: 199 TDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAG 258
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ +V AE + N GI +KT GRGG+++NI ++DV M+N I+I
Sbjct: 259 IAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRIT 318
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDD ++ NALPV++ ITIK+V G + +G++ G++ F+ ICLSN++L +
Sbjct: 319 GNYGEHPDDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL---S 375
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 274
++ P CS + G + V P C +L S G
Sbjct: 376 SKSADPWNCSLIEGFSNSVAPEICEQLRPSPGPG 409
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/270 (51%), Positives = 191/270 (70%), Gaps = 4/270 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP L+E M S ++ISN+ F NSPFWNIHPVYCS V+ +++TILAP SPN
Sbjct: 186 FHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLAQHLTILAPISSPN 245
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSS+NVCIED YI GDD+V +KSGWDEYGI++ HPSS I+IR +TG + S G
Sbjct: 246 TDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAG 305
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ +V AE I + N GI +KT GRGG+++N+ V+DV +N I+I
Sbjct: 306 LAFGSEMSGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRIT 365
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDD++N +ALP ++ ITIKDV G + +G++QG+ F+ ICLSN++L +
Sbjct: 366 GNYGEHPDDRYNKSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNICLSNVSL---S 422
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
++ P CS V G + V P C +L +S
Sbjct: 423 VRSTDPWNCSLVEGYSNSVSPEVCEQLRTS 452
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 194/275 (70%), Gaps = 4/275 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP L+E M S ++ISN+ F NSPFWNIHPVYCS V+++++TILAP SPN
Sbjct: 179 FHNHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLVQHLTILAPISSPN 238
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSS+NVCIED Y+ GDD++ +KSGWDEYGI++ HPSS I+IR +TG + S G
Sbjct: 239 TDGIDPDSSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAG 298
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ +V AE + + N GI +KT GRGG+++N+ V+DV +N I+I
Sbjct: 299 LAFGSEMSGGISDVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRIT 358
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDD ++ NALP ++ ITIKDV G + +G++QG+ F+GICLSN++L +
Sbjct: 359 GNYGEHPDDGYDRNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVSL---S 415
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 275
++ P CS V G + V P C +L ++ G+
Sbjct: 416 VRSTDPWNCSLVEGYSSSVSPEVCEQLRATPGPGS 450
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/278 (47%), Positives = 197/278 (70%), Gaps = 3/278 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E ++S +++ISN+ F+NSPFW IHPVYCSNVV++ +TILAP ++P
Sbjct: 200 LWWNRTLEHTRGHLLELISSDNVLISNLTFRNSPFWTIHPVYCSNVVVKGMTILAPLNAP 259
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED+YI +GDDLVA+KSGWD YGI HPS+ I +RR++G++P S
Sbjct: 260 NTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISGTTPTCS 319
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ N+ E++++++ G+ +K++ GRGG+I N+++SD+ ME + I+
Sbjct: 320 GVGIGSEMSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRMERVKIPIRF 379
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPDD ++P A+P I I +V ++ +++G++ S F G+C NI L GV
Sbjct: 380 SRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNITLHGV 439
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
A S +C VSG A +V P PC EL ++ + CS
Sbjct: 440 A--LSARWRCEYVSGFATEVFPVPCPELRNNSYSSWCS 475
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 191/274 (69%), Gaps = 4/274 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP L+E M S ++ISN+ F N+PFWNIHPVYCS V+++++TILAP SPN
Sbjct: 199 FHNHTLNYTRPPLLELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPN 258
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSSSNVCIED YI GDD+V +KSGWDEYGI++ HPSS I+IR +TG + S G
Sbjct: 259 TDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAG 318
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ +V AE + N GI +KT GRGG+++NI ++DV M+N I+I
Sbjct: 319 IAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRIT 378
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDD ++ N LPV++ ITIK+V G + +G++ G++ F+ ICLSN++L +
Sbjct: 379 GNYGEHPDDNYDKNVLPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL---S 435
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 274
++ P CS V G + V P C +L S G
Sbjct: 436 SKSADPWNCSLVKGFSNSVAPEICEQLRPSPGPG 469
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 195/281 (69%), Gaps = 3/281 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E NS +I+ISN+ F NSPFW IHPVYCSNVVI+ VTILAP ++P
Sbjct: 202 LWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDVTILAPLNAP 261
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGIA PSS I +RR++G++P S
Sbjct: 262 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCS 321
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ NV E +++++ G+ +KT+ GRGG++ NIT++++ ME + I+
Sbjct: 322 GVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRF 381
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPDD ++P A+P + GI I +V ++ L++G++ +P+ GIC+ N+ L G+
Sbjct: 382 SRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGL 441
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
A + C VSG V P C ++ S+ + C +H
Sbjct: 442 A--PAAKWHCEFVSGFTDAVFPVSCPQMQSNVSSSWCLDHL 480
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 195/281 (69%), Gaps = 3/281 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E NS +I+ISN+ F NSPFW IHPVYCSNVVI+ VTILAP ++P
Sbjct: 202 LWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDVTILAPLNAP 261
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGIA PSS I +RR++G++P S
Sbjct: 262 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCS 321
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ NV E +++++ G+ +KT+ GRGG++ NIT++++ ME + I+
Sbjct: 322 GVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRF 381
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPDD ++P A+P + GI I +V ++ L++G++ +P+ GIC+ N+ L G+
Sbjct: 382 SRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGL 441
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
A + C VSG V P C ++ S+ + C +H
Sbjct: 442 A--PAAKWHCEFVSGFTDAVFPVSCPQMQSNVSSSWCLDHL 480
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 282 bits (722), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 189/279 (67%), Gaps = 6/279 (2%)
Query: 2 WRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
WR L TR +L+EF++S +IIISNV NSPFW +HPVYC+NV+I+ VTILAP D
Sbjct: 154 WRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQGVTILAPQD 213
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGIDPDSSSNVCI+D YIS GDD++A+KSGWDEYGIAYG PSS I IRRVTG +
Sbjct: 214 SPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKR 273
Query: 119 -SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
+ IA+GSETSGG+ENVL E + + G+ ++T +GRG +IRN+ +S + + + + I
Sbjct: 274 GAAIAIGSETSGGIENVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVLSSITLLDIQTAI 333
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
I+G +HPD+ +N A PVV +T++ V G + + G I G+ PF ICL +I L
Sbjct: 334 TISGFSSEHPDNGYNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIALD 393
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
G T+ KC+DV G + V P C ELS + AC
Sbjct: 394 ASTGLTA--WKCTDVEGYSSSVTPKICKELSENNSPDAC 430
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 191/268 (71%), Gaps = 3/268 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +LIE +NS +++ISNV +NSPFW +HPVYC NVVI+ +TILAP ++P
Sbjct: 204 LWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVVIKDLTILAPLNAP 263
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I I+RV+G++P S
Sbjct: 264 NTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCS 323
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ GSE SGG+ NVL ++++N + +KT++GRGG+I NIT+++V ME + I+
Sbjct: 324 GVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKVPIRF 383
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DH DDK++ ALP+++GI I D+ G VQ++ +++ + + + GIC N++L+ +
Sbjct: 384 SRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVSLRAI 443
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
+C V G A++V P PC EL
Sbjct: 444 RRQVR--WQCESVYGEAHEVFPAPCEEL 469
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 191/268 (71%), Gaps = 3/268 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +LIE +NS +++ISNV +NSPFW +HPVYC NVVI+ +TILAP ++P
Sbjct: 19 LWWNRTLNHTRGHLIELVNSTNVLISNVTLRNSPFWTVHPVYCRNVVIKDLTILAPLNAP 78
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I I+RV+G++P S
Sbjct: 79 NTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCS 138
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ GSE SGG+ NVL ++++N + +KT++GRGG+I NIT+++V ME + I+
Sbjct: 139 GVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVKVPIRF 198
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DH DDK++ ALP+++GI I D+ G VQ++ +++ + + + GIC N++L+ +
Sbjct: 199 SRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNVSLRAI 258
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
+C V G A++V P PC EL
Sbjct: 259 RRQVR--WQCESVYGEAHEVFPAPCEEL 284
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/271 (53%), Positives = 187/271 (69%), Gaps = 6/271 (2%)
Query: 2 WRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
WR L TR +L+EF++S +IIISNV NSPFW +HPVYC+NV+I+ VTILAP D
Sbjct: 154 WRWSKLGLLNHTRGHLVEFVSSTNIIISNVTLVNSPFWTLHPVYCTNVLIQGVTILAPQD 213
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGIDPDSSSNVCI+D YIS GDD++A+KSGWDEYGIAYG PSS I IRRVTG +
Sbjct: 214 SPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQTKR 273
Query: 119 -SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
+ IA+GSETSGG+ENVL E + + GI ++T +GRG +IRN+ +S + + + + I
Sbjct: 274 GAAIAIGSETSGGIENVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVLSSITLLDIQTAI 333
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
I+G +HPD+ FN A PVV +T++ V G + + G I G+ PF ICL +I L
Sbjct: 334 TISGFSSEHPDNGFNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIALD 393
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSELS 268
G T+ KC+DV G + V P CS+LS
Sbjct: 394 ATTGLTA--WKCTDVEGYSSSVTPKICSQLS 422
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/274 (49%), Positives = 193/274 (70%), Gaps = 3/274 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E NS +I+ISN+ F NSPFW IHPVYCSNVVI+ VTILAP ++P
Sbjct: 191 LWWNRTLEHTRGHLLEIKNSHNILISNLTFMNSPFWTIHPVYCSNVVIKDVTILAPLNAP 250
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGIA PSS I +RR++G++P S
Sbjct: 251 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGTTPTCS 310
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ NV E +++++ G+ +KT+ GRGG++ NIT++++ ME + I+
Sbjct: 311 GVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVKVPIRF 370
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPDD ++P A+P + GI I +V ++ L++G++ +P+ GIC+ N+ L G+
Sbjct: 371 SRGSNDHPDDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNVTLLGL 430
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 273
A + C VSG V P C ++ S++ T
Sbjct: 431 A--PAAKWHCEFVSGFTDAVFPVSCPQMQSNEAT 462
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/272 (51%), Positives = 187/272 (68%), Gaps = 5/272 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +TL FTR +L+E ++SR I ISNV F+NSPFW IHPVYCS+V+I+ VTILAP +PN
Sbjct: 188 FHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDVTILAPPYAPN 247
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
DGIDPDSSSNVCI D YISTGDDL+++KSGWDE+GI YG PS+ + I V+G SP S G
Sbjct: 248 IDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAG 307
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ +V + + + N GI +KT GRGG+I NI++SD+ +EN
Sbjct: 308 IAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFT 367
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G HPDD ++P ALPV+ GI+I+DV G ++ +G + GL+ +PF +C +N++L A
Sbjct: 368 ALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSLSVGA 427
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 272
G CS+ G + +V P PC EL QQ
Sbjct: 428 G----AWNCSNTYGFSERVVPSPCLELDRKQQ 455
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/261 (50%), Positives = 184/261 (70%), Gaps = 1/261 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L +TRP+L+E MNS +IISN+ F NSPFWNIHPVYC +VV++ +TILAP +SPN
Sbjct: 169 FRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTG-SSPFSG 120
TDG+DPDSS+NVCIED YI T DDLV++K+GWDEYGI+Y PSS I I R+TG ++ SG
Sbjct: 229 TDGVDPDSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINRLTGQTTSSSG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGGV + + ++L+N GI +KT+ GRGG++RN+ + +V ++N +K I+
Sbjct: 289 IAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKAIRFT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G+HPD F+P ALP + IT ++V G + +GL++G++ F IC N+ L+
Sbjct: 349 GKYGEHPDKNFDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNICFLNVTLRVKK 408
Query: 241 GPTSPPLKCSDVSGSAYQVKP 261
P +CS+V G + V P
Sbjct: 409 NSKKSPWECSNVRGYSQWVSP 429
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/268 (51%), Positives = 187/268 (69%), Gaps = 3/268 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +LIE NS +I+ISN+ NSPFW IHPVYCSNVVIR +TILAP ++P
Sbjct: 197 LWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPMNAP 256
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PFS 119
NTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YG+A PSS I IRR++G++ S
Sbjct: 257 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCS 316
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ N+ E I++++ G+ +KT+ GRGG+I NIT ++V +E + I+
Sbjct: 317 GVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRF 376
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DH DDK++P ALP V GI I +V +++ ++ G++ + F +CL N+ L G+
Sbjct: 377 SSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGL 436
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
P + KC DVSG A V P C +L
Sbjct: 437 --PKTEKWKCKDVSGYASDVFPLSCPQL 462
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/278 (47%), Positives = 193/278 (69%), Gaps = 3/278 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E +NS +I+ISN+ F+NSPFW IHPVYCSNVVI+ +TILAP ++P
Sbjct: 55 LWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLNAP 114
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS I IRRV+G++P S
Sbjct: 115 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPTCS 174
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ N+ E +N+++ GI +K++ GRGG+I N+++++ M + I+
Sbjct: 175 GVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAIRF 234
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPD++F+P A+P V GI I ++ ++ ++ G+ + + G+C+ N+ + G+
Sbjct: 235 SRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTILGL 294
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
S C+ VSG + V P PC +L ++ + CS
Sbjct: 295 T--PSAKWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCS 330
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 194/277 (70%), Gaps = 4/277 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E MNS ++++SN+ F+NSPFW IHPVYCSNVVI+ +TILAP ++P
Sbjct: 201 LWWNRTLVHTRGHLLELMNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED+YI +GDDLVA+KSGWD+YGIA PS+ I + RV+G++P S
Sbjct: 261 NTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSGTTPTCS 320
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ N+ E+++++N G+ +K++ GRGG+I+N+++S++ ME + I+
Sbjct: 321 GVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPIRF 380
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPDD ++P A+P I I +V ++ +++G+K S F G+C NI GV
Sbjct: 381 SRGSNDHPDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLCFKNITFLGV 440
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
A S C V+G V P PC EL ++ T +C
Sbjct: 441 A--LSATWHCEYVAGFTNGVFPLPCPELQNN-GTSSC 474
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 194/279 (69%), Gaps = 3/279 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +L+E +NS +I+ISN+ F+NSPFW IHPVYCSNVVI+ +TILAP ++P
Sbjct: 195 LWWNRTLNHTRGHLVELINSHNILISNLTFKNSPFWTIHPVYCSNVVIKDMTILAPLNAP 254
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSS+NVCIED YI +GDDLVAVKSGWD+YGI PSS I IRRV+G++P S
Sbjct: 255 NTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGTTPTCS 314
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ N+ E +N+++ GI +K++ GRGG+I N+++++ M + I+
Sbjct: 315 GVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVKMAIRF 374
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DHPD++F+P A+P V GI I ++ ++ ++ G+ + + G+C+ N+ + G+
Sbjct: 375 SRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNVTILGL 434
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
S C+ VSG + V P PC +L ++ + CS+
Sbjct: 435 T--PSAKWHCAFVSGFSTSVFPTPCPQLQNTTFSSLCSS 471
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 138/278 (49%), Positives = 191/278 (68%), Gaps = 5/278 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +LIE N +I+ISN+ NSPFW IHPVYCSNVVIR +TILAP ++P
Sbjct: 197 LWWNRTLVHTRGHLIELKNCHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPINAP 256
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PFS 119
NTDGIDPDSS+NVCIED YI +GDDL+AVKSGWD+YG+A PSS I IRR++G++ S
Sbjct: 257 NTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCS 316
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG+ N+ E I++++ G+ +KT+ GRGG+I NIT ++V +E + I+
Sbjct: 317 GVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRF 376
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DH DDK++P ALP V GI I +V +++ ++ G++ + F +CL N+ L G+
Sbjct: 377 SSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGL 436
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
P + KC DVSG A V P C +L Q+ G+ S
Sbjct: 437 --PQTEKWKCKDVSGYASDVFPLSCPQL--LQKKGSIS 470
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 138/267 (51%), Positives = 185/267 (69%), Gaps = 5/267 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +TL FTR +L+E ++SR I ISNV F+NSPFW IHPVYCS+V+I+ VTILAP +PN
Sbjct: 131 FHNKTLDFTRGHLVELIDSRHITISNVTFKNSPFWTIHPVYCSDVLIQDVTILAPPYAPN 190
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
DGIDPDSSSNVCI D YISTGDDL+++KSGWDE+GI YG PS+ + I V+G SP S G
Sbjct: 191 IDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSPTSAG 250
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ +V + + + N GI +KT GRGG+I NI++SD+ +EN
Sbjct: 251 IAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVAFDFT 310
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G HPDD ++P ALPV+ GI+I+DV G ++ +G + GL+ +PF +C +N++L A
Sbjct: 311 ALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSLSVGA 370
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
G CS+ G + +V P PC EL
Sbjct: 371 G----AWNCSNTYGFSERVVPSPCLEL 393
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 196/277 (70%), Gaps = 5/277 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS V++++VTILAP +SPN
Sbjct: 153 FRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPN 212
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSG 120
TDG+ PDSS+NVCI Y+ GDD++ +KSGWDEYGI++ PSS I+I +TG + +G
Sbjct: 213 TDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGAG 272
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ V A + + N GI +KT GRGG+++N+ ++DV M+N I+I
Sbjct: 273 IAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVYIADVSMDNVSMAIRIT 332
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDDK++ ALPV++ ITIKDV G + +G+++G++ F+ ICLSN++L +
Sbjct: 333 GNYGEHPDDKYDRTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---S 389
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGAC 276
++ P CS + G + V P C +L S+ +QT C
Sbjct: 390 VQSAHPWNCSLIEGYSNSVIPESCEQLKSNCRQTPIC 426
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 196/279 (70%), Gaps = 5/279 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS V++ ++TILAP DSPN
Sbjct: 169 FHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVEHLTILAPLDSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSG 120
TDGI+PDSS+N+CI+ Y+ GDD++ +KSGWDEYGI++ HPSS I+I +TG + +G
Sbjct: 229 TDGINPDSSTNICIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETRGGAG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ V AE + + N GI +KT GRGG++RN+ ++DV M N I+I
Sbjct: 289 IAIGSEMSGGISEVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRIT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPD+ ++ NALP+++ ITI++V G V +G+++G++ F+ IC+SN++L +
Sbjct: 349 GNYGEHPDNNYDRNALPMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVSL---S 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGACSN 278
+ P CS + G + V P C +L + QT C N
Sbjct: 406 VQSMHPWNCSLIQGYSNSVIPESCDQLRTDCGQTPVCYN 444
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 190/279 (68%), Gaps = 3/279 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +LIE ++S +I+ISN+ +NSPFW +HPVYC NVVIR +T+LAP ++P
Sbjct: 205 LWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAP 264
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I I+RV+G++P S
Sbjct: 265 NTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCS 324
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ GSE SGG+ NV+ ++++N + +KT++GRGG+I NIT+ +V ME + I+
Sbjct: 325 GVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRF 384
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DH DDK++ +ALP ++ + I+DV G +Q++ +++ + + + GIC N++L +
Sbjct: 385 SRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVI 444
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
C V G A+ V P PC E + + C +
Sbjct: 445 K--RQDRWHCESVYGEAHDVLPAPCEEFRRNGSSSWCGH 481
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 190/279 (68%), Gaps = 3/279 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +LIE ++S +I+ISN+ +NSPFW +HPVYC NVVIR +T+LAP ++P
Sbjct: 205 LWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAP 264
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I I+RV+G++P S
Sbjct: 265 NTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCS 324
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ GSE SGG+ NV+ ++++N + +KT++GRGG+I NIT+ +V ME + I+
Sbjct: 325 GVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRF 384
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DH DDK++ +ALP ++ + I+DV G +Q++ +++ + + + GIC N++L +
Sbjct: 385 SRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVI 444
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
C V G A+ V P PC E + + C +
Sbjct: 445 K--RQDRWHCESVYGEAHDVLPAPCEEFRRNGSSSWCGH 481
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 190/279 (68%), Gaps = 3/279 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +LIE ++S +I+ISN+ +NSPFW +HPVYC NVVIR +T+LAP ++P
Sbjct: 205 LWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNLTVLAPLNAP 264
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PSS I I+RV+G++P S
Sbjct: 265 NTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTPTCS 324
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ GSE SGG+ NV+ ++++N + +KT++GRGG+I NIT+ +V ME + I+
Sbjct: 325 GVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVPIRF 384
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DH DDK++ +ALP ++ + I+DV G +Q++ +++ + + + GIC N++L +
Sbjct: 385 SRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSLTVI 444
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
C V G A+ V P PC E + + C +
Sbjct: 445 K--RQDRWHCESVYGEAHDVLPAPCEEFRRNGSSSWCGH 481
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/267 (47%), Positives = 180/267 (67%), Gaps = 1/267 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ Q+ L TRP LIEF+ S + ISN+ NSP WN+HP YCSNV+I+++TILAP DSPN
Sbjct: 158 FHQKKLKLTRPYLIEFLYSDQVQISNLTLINSPSWNVHPTYCSNVLIQWLTILAPVDSPN 217
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDSSSNV IEDS++ +GDD +AVKSGWDEYGI +G P+ + IRR T SP S
Sbjct: 218 TDGINPDSSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRRFTCISPDSAT 277
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V AE I + G+ +KT +GRG ++++I V + ++ + +
Sbjct: 278 IALGSEMSGGIQDVRAEDITALSTQSGVRIKTAVGRGAYVKDIFVRRMTLKTMKYAFWMT 337
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD ++P ALP + GI+ KD+ V S ++G++N PFTGIC+SN+N+
Sbjct: 338 GSYGSHPDTGYDPKALPEIKGISYKDIVAENVTYSARLEGIENDPFTGICISNVNISLTQ 397
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
P C+D+ G + +V P PC+ L
Sbjct: 398 KPKELQWNCTDIQGVSSKVTPQPCAAL 424
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 193/277 (69%), Gaps = 5/277 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS V++R+VTILAP +SPN
Sbjct: 169 FHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSG 120
TDG+ PDSS+NVCI Y+ G D++ +KSGWDEYGI++ PSS I+I +TG + SG
Sbjct: 229 TDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ V A + + N GI +KT GRGG++ N+ ++DV M+N I+I
Sbjct: 289 IAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRIT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDDK++ ALPV++ ITIKDV G + +G+++G++ F+ ICLSN++L +
Sbjct: 349 GNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---S 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGAC 276
++ P CS + G + V P C +L S+ +QT C
Sbjct: 406 VQSAHPWNCSLIEGYSNSVIPESCEQLRSNCRQTSIC 442
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 189/277 (68%), Gaps = 3/277 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +LIE +NS +I+IS++ +NSPFW +HPVYCSNVV++ +TILAP ++P
Sbjct: 220 LWWNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCSNVVMKDLTILAPLNAP 279
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSSS VCIED YI +GDDLVAVKSGWD+YGI+ G PS+ I I+RV+G++P S
Sbjct: 280 NTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTPTCS 339
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ GSE SGG+ NVL ++++N + +KT++GRGG+I NIT+S+V ME + I+
Sbjct: 340 GVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIRF 399
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DH DD ++ ALP ++ + I DV G +Q++ +++ + + + IC N +L+G+
Sbjct: 400 SRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRGI 459
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
C V G A++V P PC E + + C
Sbjct: 460 R--RQDRWHCESVYGEAHEVFPAPCEEFRKNGSSSWC 494
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/274 (49%), Positives = 182/274 (66%), Gaps = 1/274 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ ++ L TR L+E M S+ IIISN+ F NSP WN+HPVY SN++I+YVTILAP DSPN
Sbjct: 172 FHKKILKNTRGYLVELMYSKDIIISNLTFLNSPAWNLHPVYSSNILIQYVTILAPLDSPN 231
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDS S V IED Y+ +GDD+VA+KSGWDEYGI++G PS I IRR+ G SP S
Sbjct: 232 TDGIDPDSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQHIVIRRLVGISPTSAI 291
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V AE I N GI +KT+ GRGGF+++I V+ + M N + +
Sbjct: 292 IALGSEMSGGIQDVRAEDIQAINSETGIRIKTSPGRGGFVKDIFVNRMTMVNMKWAFTMT 351
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD+K++PNALP V I+ ++ T V +G + G+ N+PF ICL+N+ + A
Sbjct: 352 GSYGSHPDNKYDPNALPAVERISYSNIVATNVSVAGKLDGIANAPFKDICLTNVTITMAA 411
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 274
P C+ + G + V P PCS L G
Sbjct: 412 KSKKYPWNCTYIHGLSNAVYPQPCSLLEERPAEG 445
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 193/277 (69%), Gaps = 5/277 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS V++++VTILAP +SPN
Sbjct: 169 FHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSG 120
TDG+ PDSS+NVCI Y+ G D++ +KSGWDEYGI++ PSS I+I +TG + SG
Sbjct: 229 TDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ V A + + N GI +KT GRGG++ N+ ++DV M+N I+I
Sbjct: 289 IAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRIT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDDK++ ALPV++ ITIKDV G + +G+++G++ F+ ICLSN++L +
Sbjct: 349 GNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---S 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGAC 276
++ P CS + G + V P C +L S+ +QT C
Sbjct: 406 VQSAHPWNCSLIEGYSNSVIPESCEQLRSNCRQTSIC 442
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/280 (51%), Positives = 186/280 (66%), Gaps = 4/280 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+++EF++S IIISN+ F NSP WNIHPVYCSNV ++ +T AP +SP
Sbjct: 188 FSSHSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNITAYAPPESPR 247
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T G+ PDSS +CIEDS IS G D + +KSGWDEYGIAYG P+ + IRRV SS SG
Sbjct: 248 TSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSG 307
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ ++L EHI+L + GI +KT GRGG+I+ I +SDV MEN I
Sbjct: 308 LAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGAT 367
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G HPDDK++P ALPVV+GIT KD+ GT V +G G+ SPFT ICL NI+L +
Sbjct: 368 GQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLS-IT 426
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACSN 278
+S P CS+V GS+ V P PC L +S CS+
Sbjct: 427 SNSSKPWLCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSS 466
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 185/277 (66%), Gaps = 4/277 (1%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
+L ++RP+++EF++S IIISN+ F NSP WNIHPVYCSNV ++ +T AP +SP T G
Sbjct: 256 HSLNYSRPHIVEFISSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNITAYAPPESPRTSG 315
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAV 123
+ PDSS +CIEDS IS G D + +KSGWDEYGIAYG P+ + IRRV SS SG+A
Sbjct: 316 VVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSSSGSGLAF 375
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
GSE SGG+ ++L EHI+L + GI +KT GRGG+I+ I +SDV MEN I G
Sbjct: 376 GSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLTIGATGQC 435
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
HPDDK++P ALPVV+GIT KD+ GT V +G G+ SPFT ICL NI+L + +
Sbjct: 436 RSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISLS-ITSNS 494
Query: 244 SPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACSN 278
S P CS+V GS+ V P PC L +S CS+
Sbjct: 495 SKPWLCSNVFGSSECVSPEPCPNLQTKTSNSFSTCSS 531
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 195/277 (70%), Gaps = 5/277 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP+L+E M S ++ISN+ F+NSPFWNIHPVYCS V++++VTILAP +SPN
Sbjct: 169 FHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSG 120
TDGIDPDSS+NVCI+ Y+ GDD++ +KSGWDEYGI++ PS+ I+I +TG + +G
Sbjct: 229 TDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ V AE + + N GI +KT GRGG+++N+ +SDV M+N I+I
Sbjct: 289 IAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRIT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDDK++ NALP+++ ITI++V G V +G+++G++ F+ ICLSN++L +
Sbjct: 349 GNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSL---S 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGAC 276
+ P CS + G + V P C +L + QT C
Sbjct: 406 VQSMHPWNCSLIEGYSNSVIPESCEQLRTDCGQTPIC 442
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 195/277 (70%), Gaps = 5/277 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP+L+E M S ++ISN+ F+NSPFWNIHPVYCS V++++VTILAP +SPN
Sbjct: 153 FHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPLNSPN 212
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSG 120
TDGIDPDSS+NVCI+ Y+ GDD++ +KSGWDEYGI++ PS+ I+I +TG + +G
Sbjct: 213 TDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETRGGAG 272
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ V AE + + N GI +KT GRGG+++N+ +SDV M+N I+I
Sbjct: 273 IAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMAIRIT 332
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDDK++ NALP+++ ITI++V G V +G+++G++ F+ ICLSN++L +
Sbjct: 333 GNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSL---S 389
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGAC 276
+ P CS + G + V P C +L + QT C
Sbjct: 390 VQSMHPWNCSLIEGYSNSVIPESCEQLRTDCGQTPIC 426
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 187/282 (66%), Gaps = 6/282 (2%)
Query: 2 WRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W++ + L +TRP LIE M S ++ ISN+ NSP WNIHPVYCSNV+++ +TILAP
Sbjct: 166 WKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVT 225
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI+YG P+ + IRR+T SP
Sbjct: 226 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPT 285
Query: 119 SG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
S IA+GSE SGG+E+V AE I N G+ +KT +GRGG++R+I V + M+ +
Sbjct: 286 SAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVF 345
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ GD G H D+ ++PNA+PV+ I +D+ V + ++G+ +PFTGIC+SN+ ++
Sbjct: 346 WMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLEGISGAPFTGICISNVTIE 405
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACS 277
P C+DVSG + V P PC L + ++ GACS
Sbjct: 406 LAKKAKKVPWTCTDVSGISSGVTPEPCELLPGQAEEKFGACS 447
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 184/279 (65%), Gaps = 3/279 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R+ L +TRP LIE M S ++ ISN+ NSP WN+HP+Y SN+V++ +TILAP SPN
Sbjct: 169 FRKGELKYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPIYSSNLVVQGITILAPVTSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR+T SPFS
Sbjct: 229 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAV 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V AE I N G+ +KT +GRGG++++I V + M+ + +
Sbjct: 289 IALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAFWMT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G H DD ++PNALPV+ I +D+ V + ++G+ PFTGIC+SN+ +Q
Sbjct: 349 GNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAK 408
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACS 277
P C+D++G + V P PC L ++ GAC+
Sbjct: 409 KAKKVPWTCTDIAGISSDVTPAPCGLLPDQGEEKIGACT 447
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 186/282 (65%), Gaps = 6/282 (2%)
Query: 2 WRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W++ + L +TRP LIE M S ++ ISN+ NSP WNIHPVYCSNV+++ +TILAP
Sbjct: 166 WKKFHNKQLQYTRPYLIEIMYSDNVQISNLTLVNSPSWNIHPVYCSNVIVQGITILAPVT 225
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI+YG P+ + IRR+T SP
Sbjct: 226 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTCISPT 285
Query: 119 SG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
S IA+GSE SGG+E+V AE I N G+ +KT +GRGG++R+I V + M+ +
Sbjct: 286 SAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTMKWVF 345
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ GD G H D+ ++PNA+PV+ I +D+ V + + G+ +PFTGIC+SN+ ++
Sbjct: 346 WMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLGGISGAPFTGICISNVTIE 405
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACS 277
P C+DVSG + V P PC L + ++ GACS
Sbjct: 406 LAKKAKKVPWTCTDVSGISSGVTPEPCELLPGQAEEKFGACS 447
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 185/264 (70%), Gaps = 4/264 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP+L+E M S +++ISN+ F+NSPFWNIHPVYCS V++R+VTILAP +SPN
Sbjct: 169 FHNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNIHPVYCSQVLVRHVTILAPLNSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSG 120
TDG+ PDSS+NVCI Y+ G D++ +KSGWDEYGI++ PSS I+I +TG + SG
Sbjct: 229 TDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ V A + + N GI +KT GRGG++ N+ ++DV M+N I+I
Sbjct: 289 IAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRIT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPDDK++ ALPV++ ITIKDV G + +G+++G++ F+ ICLSN++L +
Sbjct: 349 GNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---S 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPC 264
++ P CS + G + V P C
Sbjct: 406 VQSAHPWNCSLIEGYSNSVIPESC 429
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/284 (45%), Positives = 185/284 (65%), Gaps = 7/284 (2%)
Query: 1 MWRQR----TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
+W Q+ L +TRP L+E M S ++ ISN+ NSP WN+HP+Y SNVV++ +TILAP
Sbjct: 189 LWWQKFHKGELKYTRPYLVEIMYSDNVQISNLTLVNSPSWNVHPIYSSNVVVQGITILAP 248
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
SPNTDGI+PDS ++ IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR+T S
Sbjct: 249 VTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 308
Query: 117 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
PFS IA+GSE SGG++++ AE I N G+ +KT +GRGG++++I V + M+ +
Sbjct: 309 PFSAAIALGSEMSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRRMTMKTMKW 368
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+ G+ G H DD ++PNALPV+ I +D+ V + ++G+ PFTGIC+SN+
Sbjct: 369 AFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVT 428
Query: 236 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGACS 277
+Q P C+D++G + V P PC L ++ GAC+
Sbjct: 429 IQLAKKAKKVPWTCTDIAGISSDVTPAPCDLLPDQGEEKIGACT 472
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/271 (48%), Positives = 179/271 (66%), Gaps = 3/271 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++ +TL +TR +L+E ++S+ I+ISN+ F++SPFW IHPVYC NVV++ +T+LAP +SPN
Sbjct: 175 FQNKTLDYTRGHLVELIDSKDILISNLTFRDSPFWTIHPVYCRNVVVKDMTLLAPLNSPN 234
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR-VTGSSPFSG 120
TDGIDPDSS VCIED YIS GDD +A+KSGWDEYG AYG PS I IRR V S +G
Sbjct: 235 TDGIDPDSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPSQHIDIRRIVVHSETSAG 294
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ +V +H+ ++ GI KT GRGG+IRNITV +V M + I
Sbjct: 295 IAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNITVDNVNMRSVNTAIAFT 354
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPD+ +N PV+ + I+++ G + +GL GL SPF I L+NI L
Sbjct: 355 GNYGEHPDENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPESPFLNIHLANIALD--T 412
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
S CS V+G+ + V P PC + + +
Sbjct: 413 KSESEDWNCSSVAGTYFFVWPQPCPDFTKEE 443
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 176/261 (67%), Gaps = 3/261 (1%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
+TL +TR +L+E ++S I+ISN+ F++SPFW IHPVYC NVV++ +TILAP DSPNTDG
Sbjct: 135 KTLDYTRGHLVELIDSSDILISNLTFRDSPFWTIHPVYCRNVVVKDMTILAPLDSPNTDG 194
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAV 123
IDPDSS NVCIED YIS G D +A+KSGWDEYG +YG PS I +RR+T S S GIA
Sbjct: 195 IDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVRRITVHSKTSAGIAF 254
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
GSE SGG+ +V +H+ ++ GI KT +GRGG+IRN+TV +V M + I G+
Sbjct: 255 GSEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVDMHSVGTAIAFTGNY 314
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
G+HPD+ +N PV+ I+I++V G + +GL GL SPF I L+NI L
Sbjct: 315 GEHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNIHLANIALD--VKSE 372
Query: 244 SPPLKCSDVSGSAYQVKPWPC 264
S CS V+G+ + V P PC
Sbjct: 373 SDDWNCSSVAGTYFFVWPQPC 393
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/270 (49%), Positives = 186/270 (68%), Gaps = 2/270 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
++ +L ++RP+LIE + S +++SN+ F N+P ++IHPVYCSNV I V+I AP +SP
Sbjct: 164 LFSSHSLNYSRPHLIELVASDHVVVSNLTFLNAPAYSIHPVYCSNVHIHNVSISAPPESP 223
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFS 119
NT GI PDSS +VCIED I+TG D +++KSGWDEYGIAYG P+ + IRRV +S S
Sbjct: 224 NTVGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQASSGS 283
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
IA GS+ SGG+ N+L E+++LYN GI +T GRGG+++ I +SD+ MEN I
Sbjct: 284 TIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAIAA 343
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G G HPDDKF+PNALP+++ I ++D+ GT + +G GL+ SPFT ICLSNI L
Sbjct: 344 TGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNITLS-T 402
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSS 269
+S P +CS+VSG + V P PC +L +
Sbjct: 403 NSVSSIPWECSNVSGFSDYVLPKPCPDLET 432
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 189/279 (67%), Gaps = 3/279 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+W RTL TR +LIE +NS +++ISNV +NSPFW +HPVYC NVVI+ +TILAP ++P
Sbjct: 204 LWWNRTLNHTRGHLIELVNSTNVMISNVTLRNSPFWTVHPVYCRNVVIKDLTILAPLNAP 263
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FS 119
NTDGIDPDSSS+VCIED YI +GDDLVA+KSGWD+YGI+ PS+ I I+RV+G++P S
Sbjct: 264 NTDGIDPDSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIIIQRVSGTTPTCS 323
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGGV VL ++++N + +KT++GRGGF+ N+TV++V ME + I+
Sbjct: 324 GVGIGSEMSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANVTMERVKVPIRF 383
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ DH DDK++ ALP ++ + I D+ G VQ++ +++ + + + GIC N++L+
Sbjct: 384 SRGSDDHSDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEGICFRNVSLRLR 443
Query: 240 AGPTS--PPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
+C V G A+ V P C EL + + C
Sbjct: 444 EEVRRRHAGWQCESVYGEAHGVFPEACEELRHNGSSSWC 482
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 181/283 (63%), Gaps = 7/283 (2%)
Query: 1 MWRQR----TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
+W QR L +TRP LIE M S I ISN+ NSP WN+HPVY N++I+ +TILAP
Sbjct: 184 LWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAP 243
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR+T S
Sbjct: 244 VRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 303
Query: 117 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P+S IA+GSE SGG+++V AE I N GI +KT IGRGG++++I V + M+ +
Sbjct: 304 PYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKW 363
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+ G+ G H D+ ++P A PV+ GI +D+ V + ++G+ + PFTGIC+SN+
Sbjct: 364 AFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVT 423
Query: 236 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 276
+ A P C+DV G + V P PCS L ++T C
Sbjct: 424 IHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLC 466
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 188/265 (70%), Gaps = 2/265 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R ++L +TR +L+EF+NS++I++SN+ NSP W IHPVYCSNVVIR VT++AP++SPN
Sbjct: 162 FRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGVTVVAPSESPN 221
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSG 120
TDG+ PDS + VCIED I++G D V+VKSGWDEYGI G PS+ + IRR+T + +
Sbjct: 222 TDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRRITAQAPASAA 281
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG++NV+ E + ++N +G+HVKT GRGG+++NI+V++V M++ I ++
Sbjct: 282 IAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALS 341
Query: 181 GD-VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G+ +HPD+ ++P A PVV GI + VWG + +G ++GL+ +PF ICLSNI L+
Sbjct: 342 GNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVD 401
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPC 264
CS+V G++ V P PC
Sbjct: 402 EASQGSKWDCSNVKGASLGVTPTPC 426
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 181/283 (63%), Gaps = 7/283 (2%)
Query: 1 MWRQR----TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
+W QR L +TRP LIE M S I ISN+ NSP WN+HPVY N++I+ +TILAP
Sbjct: 172 LWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAP 231
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR+T S
Sbjct: 232 VRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 291
Query: 117 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P+S IA+GSE SGG+++V AE I N GI +KT IGRGG++++I V + M+ +
Sbjct: 292 PYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKW 351
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+ G+ G H D+ ++P A PV+ GI +D+ V + ++G+ + PFTGIC+SN+
Sbjct: 352 AFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVT 411
Query: 236 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 276
+ A P C+DV G + V P PCS L ++T C
Sbjct: 412 IHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLC 454
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 128/265 (48%), Positives = 188/265 (70%), Gaps = 2/265 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R ++L +TR +L+EF+NS++I++SN+ NSP W IHPVYCSNVVIR VT++AP++SPN
Sbjct: 162 FRNQSLNYTRGHLVEFINSKNIVVSNISLLNSPSWTIHPVYCSNVVIRGVTVVAPSESPN 221
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSG 120
TDG+ PDS + VCIED I++G D V+VKSGWDEYGI G PS+ + IRR+T + +
Sbjct: 222 TDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRRITAQAPASAA 281
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG++NV+ E + ++N +G+HVKT GRGG+++NI+V++V M++ I ++
Sbjct: 282 IAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVLTAIALS 341
Query: 181 GD-VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G+ +HPD+ ++P A PVV GI + VWG + +G ++GL+ +PF ICLSNI L+
Sbjct: 342 GNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSNITLEVD 401
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPC 264
CS+V G++ V P PC
Sbjct: 402 DASQGSKWDCSNVKGASLGVTPTPC 426
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 180/264 (68%), Gaps = 2/264 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF+ S ++++SN+ F N+P +NIHPVYCSNV ++ +++ AP +SP
Sbjct: 165 FTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVYCSNVRVQNISVYAPPESPY 224
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSG 120
T GI PDSS + CIED I+ G D +A+KSGWDEYGIAYG P++ + IRRV SS S
Sbjct: 225 TVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSS 284
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ NV E ++LYN GI +T GRGG+I+ I +SDV MEN
Sbjct: 285 LAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSAT 344
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G +G HPDD F+PNALPV++ IT+++V GT + +G G++ SPFT ICLSNI+L
Sbjct: 345 GQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLS-TT 403
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPC 264
P S CS+VSG + V P PC
Sbjct: 404 PPASISWVCSNVSGFSQWVFPEPC 427
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 180/264 (68%), Gaps = 2/264 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF+ S ++++SN+ F N+P +NIHPVYCSNV ++ +++ AP +SP
Sbjct: 167 FTSHSLNYSRPHLVEFLASTNVVVSNLTFLNAPAYNIHPVYCSNVRVQNISVYAPPESPY 226
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSG 120
T GI PDSS + CIED I+ G D +A+KSGWDEYGIAYG P++ + IRRV SS S
Sbjct: 227 TVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSS 286
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ NV E ++LYN GI +T GRGG+I+ I +SDV MEN
Sbjct: 287 LAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSAT 346
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G +G HPDD F+PNALPV++ IT+++V GT + +G G++ SPFT ICLSNI+L
Sbjct: 347 GQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLS-TT 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPC 264
P S CS+VSG + V P PC
Sbjct: 406 PPASISWVCSNVSGFSQWVFPEPC 429
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 186/277 (67%), Gaps = 3/277 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+E + S +++SN+ F N+P +NIHPVYC NV I ++I AP +SP
Sbjct: 166 FSSHSLNYSRPHLVELVASTDVVVSNLTFLNAPAYNIHPVYCRNVHIHNISIFAPPESPY 225
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SG 120
T GI PDSS +VCIED I+TG D +A+KSGWDEYGIAYG P+ + IRRV + + S
Sbjct: 226 TVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQASYGST 285
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GS+ SGG+ NV EH++LYN GI +T GRGG++++I +SD+ M+N + I
Sbjct: 286 LAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEMKNIYRAISAT 345
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPDDKF+PNALP+++ +D+ GT + +G GL+ SPFT ICLSNI L V
Sbjct: 346 GYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFTNICLSNITLS-VN 404
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSS-SQQTGAC 276
+S +CS+VSG + V P PC +L S S + +C
Sbjct: 405 YASSTSWECSNVSGFSDSVLPIPCPDLDSPSNYSSSC 441
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 173/270 (64%), Gaps = 4/270 (1%)
Query: 2 WRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W+Q + L +TRP LIE M S +I ISN+ NSP WN+HPVY SN++++ +TI AP
Sbjct: 178 WQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIFAPVT 237
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGI+PDS +NV IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP+
Sbjct: 238 SPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRRLTCISPY 297
Query: 119 SG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
S IA+GSE SGG+++V AE I G+ +KT +GRGG++++I V + + +
Sbjct: 298 SATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAF 357
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
K+ GD H D ++PNALP + I +DV V + QG+ N PFTGIC++N+ L+
Sbjct: 358 KMTGDYNSHADSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLR 417
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
A P C+D+ G V P PC L
Sbjct: 418 MAAKAKKQPWTCTDIEGMTSGVTPPPCGLL 447
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/271 (48%), Positives = 187/271 (69%), Gaps = 4/271 (1%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
++ +L ++RP+LIE + S +++SN+ F N+P ++IHPVYCSNV I V+I AP +SP
Sbjct: 175 LFSSHSLNYSRPHLIELVASNRVVVSNLTFLNAPAYSIHPVYCSNVHIHNVSISAPQESP 234
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
T GI PDSS +VCIED I+TG D +++KSGWDEYGIAYG P+ + IRRV + +SG
Sbjct: 235 YTIGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQA-YSG 293
Query: 121 --IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
IA GS+ SGG+ N+L E+++LYN GI +T GRGG+++ I +SD+ MEN +
Sbjct: 294 STIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTAMA 353
Query: 179 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
G G HPDDKF+PNALP+++ I ++D+ GT + +G GL+ SPFT ICLSN+ L
Sbjct: 354 ATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNVTLS- 412
Query: 239 VAGPTSPPLKCSDVSGSAYQVKPWPCSELSS 269
+ +S P +CS+VSG + V P PC +L +
Sbjct: 413 INSVSSIPWECSNVSGFSDSVLPKPCPDLET 443
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 178/266 (66%), Gaps = 1/266 (0%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R L +RPNL+EF+ S I+ISN+ F NSP W+IHPVYCSNV + VTI D+P T
Sbjct: 171 RSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLT 230
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGI 121
DGI PDS SN+CIEDS IS + +++KSGWD YGI++G P+S I I RV SS + +
Sbjct: 231 DGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAAL 290
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A GSE SGG+ ++ H+ +++ GI KT+ GRGG+I ++ +S+V MEN GI+ G
Sbjct: 291 AFGSEMSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTG 350
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
+ HPDD F+P+ LP ++ +T+K++ GT + +G++ G++ +PFT ICLSN+N AG
Sbjct: 351 NCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAG 410
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSEL 267
CSDVSG + V P PC+EL
Sbjct: 411 SGPSSWSCSDVSGYSEAVFPEPCTEL 436
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 173/270 (64%), Gaps = 4/270 (1%)
Query: 2 WRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W+Q + L +TRP LIE M S +I ISN+ NSP WN+HPVY SN++++ +TI AP
Sbjct: 178 WQQFHRKKLKYTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVT 237
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGI+PDS +NV IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP+
Sbjct: 238 SPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPY 297
Query: 119 SG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
S IA+GSE SGG+++V AE I G+ +KT +GRGG++++I V + + +
Sbjct: 298 SATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTMKWAF 357
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
K+ GD H D ++PNALP + I +DV V + QG+ N PFTGIC++N+ L+
Sbjct: 358 KMTGDYNSHADGHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIANVTLR 417
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
A P C+D+ G V P PC L
Sbjct: 418 MAAKAKKQPWTCTDIEGMTSGVTPPPCGLL 447
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 187/269 (69%), Gaps = 2/269 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF +S+ +++SN+ F N+P +NIHPVYCSNV + +++ AP++SP
Sbjct: 163 FSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYVYNISVSAPSESPY 222
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T GI PDSS +VCIE I+TG D +A+KSGWD+YGIAYG PS I IRRV SS S
Sbjct: 223 TVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSS 282
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ NVL EH+ L N +GI ++T GRGG+I+ I VSDV MEN +
Sbjct: 283 IAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSAS 342
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPDD+++PNALP+V IT+++V GT ++ +G G++ SPFT I LSNI +
Sbjct: 343 GHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINS 402
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSS 269
++ + CSDVSG + V P PCS+LS+
Sbjct: 403 SSSTSWI-CSDVSGFSESVIPPPCSDLST 430
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 187/269 (69%), Gaps = 2/269 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF +S+ +++SN+ F N+P +NIHPVYCSNV + +++ AP++SP
Sbjct: 168 FSSHSLNYSRPHLVEFEDSQYVVVSNLTFLNTPAYNIHPVYCSNVYVYNISVSAPSESPY 227
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T GI PDSS +VCIE I+TG D +A+KSGWD+YGIAYG PS I IRRV SS S
Sbjct: 228 TVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQSSSGSS 287
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ NVL EH+ L N +GI ++T GRGG+I+ I VSDV MEN +
Sbjct: 288 IAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENISTAFSAS 347
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPDD+++PNALP+V IT+++V GT ++ +G G++ SPFT I LSNI +
Sbjct: 348 GHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNITFSINS 407
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSS 269
++ + CSDVSG + V P PCS+LS+
Sbjct: 408 SSSTSWI-CSDVSGFSESVIPPPCSDLST 435
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 176/271 (64%), Gaps = 1/271 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++++ L TRP +IE M S I ISN+ NSP W +HPVY SN++I +TILAP D PN
Sbjct: 190 FQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPN 249
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDSS+NV IED+YI +GDD +A+KSGWDEYGI G PS I +RR+T SP S
Sbjct: 250 TDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSAL 309
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A+GSE SGG+++V E + N + +K+ +GRG F+++I V + + + +
Sbjct: 310 VALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMT 369
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G GDHPD+ F+PNALP ++GI +DV V +G ++G+ N PFTGIC+SN+ ++ A
Sbjct: 370 GSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSA 429
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
P C+D+SG V P PC L +
Sbjct: 430 HKKKLPWNCTDISGVTSNVVPKPCELLKEKE 460
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 1 MW----RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
MW + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++ +TILAP
Sbjct: 202 MWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAP 261
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
+SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I IRR+T S
Sbjct: 262 TNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVS 321
Query: 117 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P S IA+GSE SGG+++V AE I N + +KT +GRG ++R++ + + ++
Sbjct: 322 PTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKR 381
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNI 234
+ GD HPDDK++PNA+PVV I+ +DV T V +++ +QG++ +PF GIC++N+
Sbjct: 382 VFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANV 441
Query: 235 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
++ P C+D+ G + V P PC L + GAC
Sbjct: 442 TAD-LSKSRKYPWNCADIEGVSANVSPAPCDPLQGAHD-GAC 481
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 180/276 (65%), Gaps = 6/276 (2%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R +TL ++R +++E + S+ I+I N+ FQNSP W IHPVYC NVVI+ +T+L P DSPN
Sbjct: 149 FRNKTLDYSRSHVLELIGSQDILIFNLTFQNSPSWTIHPVYCKNVVIKNLTVLNPNDSPN 208
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP---- 117
TDGIDPDSS +VCIED YIS GDD +++KSGWD+YGI+YG PS I IRR+ +S
Sbjct: 209 TDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRRIVSASKTFGI 268
Query: 118 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
+G++ GSE SGG+ NV + + LY G+ KT+ GRGG+I+++ V ++ + + + +
Sbjct: 269 HAGVSFGSEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHNLLLHSVKTAV 328
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ G HPDD +N A PV+ I IK++ G + Q+G++QGL SPF I L I L
Sbjct: 329 AFMANYGQHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFRHIHLKTIALD 388
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 273
T CS VSGS + V P PC++L+ T
Sbjct: 389 --VRSTKNVWNCSWVSGSYFFVVPQPCADLTRQNIT 422
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/273 (46%), Positives = 178/273 (65%), Gaps = 1/273 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+TRP LIE M S +I ISN+ NSP WNIHP Y SNVV++ +TILAP +SPNTDGI+PD
Sbjct: 186 YTRPYLIEIMYSNNIQISNLTLMNSPSWNIHPTYSSNVVVQGITILAPVNSPNTDGINPD 245
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSET 127
S +N IED YI +GDD VAVKSGWDEYGI++G P+ + IRR+T SP S IA+GSE
Sbjct: 246 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAAIALGSEM 305
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGG+++V AE I N G+ +KT++GRGG++++I V + M + + G+ G HP
Sbjct: 306 SGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTMHTMKWVFWMTGNYGSHP 365
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 247
D+ ++PNA+PV+ I +D+ V + ++G+ PFTGIC+SN+ + P
Sbjct: 366 DNNYDPNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGICISNVTIGLAQKPKKLQW 425
Query: 248 KCSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
C+D++G + V P PCS L ++ +F
Sbjct: 426 NCTDIAGISSGVTPKPCSLLPEQEKEKIADCNF 458
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 185/279 (66%), Gaps = 6/279 (2%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L +RP+L+EF+ S +++SN+ F N+P ++IHPVYCS+V I+ V+I P +SP
Sbjct: 163 YSTHSLNHSRPHLVEFVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPPESPY 222
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
T GI PDSS NVCIED ++ G D +++KSGWDEYGIAYG P+ + IRRV + FSG
Sbjct: 223 TVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVQLHA-FSGS 281
Query: 121 -IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
+A GS+ SGG+ NVL EH +L+N GI +T GRGG+++ I +SD+ MEN I
Sbjct: 282 ALAFGSDMSGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAA 341
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G+ G HPDDKF+PNALP ++ IT+KDV GT + +G + G+ SPFT ICLSNI L
Sbjct: 342 TGNCGSHPDDKFDPNALPHLDHITLKDVIGTNITIAGNLAGIDESPFTNICLSNITLS-- 399
Query: 240 AGPTSP-PLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
SP CS+VSG + V P PC EL ++ + S
Sbjct: 400 TNSVSPITWACSNVSGFSDSVLPEPCPELGNTSYDSSSS 438
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 180/278 (64%), Gaps = 3/278 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L TRP LIE M S +I ISN+ NSP WN+HPVYCSNVV++ +TILAP SPN
Sbjct: 170 FRAGELNHTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPN 229
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +N I+D YI +GDD VAVKSGWDEYGIA+G P+ + IRR+T SP S
Sbjct: 230 TDGINPDSCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAV 289
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+E+V AE I + G+ +KT +GRGG++++I V + ++ + +
Sbjct: 290 IALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMT 349
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD+ ++PNA+PV+ I +DV V + ++G+ PFTGIC+SN+ +
Sbjct: 350 GNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLAR 409
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 276
CSDV+G +V P PC LS + GAC
Sbjct: 410 NRKKLQWNCSDVAGITSEVTPKPCDLLSDQGPGKIGAC 447
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 1 MW----RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
MW + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++ +TILAP
Sbjct: 182 MWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAP 241
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
+SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I IRR+T S
Sbjct: 242 TNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVS 301
Query: 117 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P S IA+GSE SGG+++V AE I N + +KT +GRG ++R++ + + ++
Sbjct: 302 PTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKR 361
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNI 234
+ GD HPDDK++PNA+PVV I+ +DV T V +++ +QG++ +PF GIC++N+
Sbjct: 362 VFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANV 421
Query: 235 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
++ P C+D+ G + V P PC L + GAC
Sbjct: 422 TAD-LSKSRKYPWNCADIEGVSANVSPAPCDPLQGAHD-GAC 461
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 179/278 (64%), Gaps = 3/278 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++++ L +TRP LIE M S I ISN+ NSP WN+HPVY SN++I+ +TI+AP SPN
Sbjct: 181 FQKKKLKYTRPYLIELMFSDKIQISNLTLLNSPSWNVHPVYSSNIIIKGLTIIAPVPSPN 240
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGI+PDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP S
Sbjct: 241 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPESAA 300
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V AE I + G+ +KT +GRGG++++I V + M + +
Sbjct: 301 IALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMT 360
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G H D ++PNALP +NGI +DV V + ++G+ N PFTGIC++N+ + A
Sbjct: 361 GNYGSHADSHYDPNALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTINMAA 420
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 276
P C+D+ G V P PC+ L ++ AC
Sbjct: 421 KAKKQPWACTDIEGITSGVTPKPCNSLPDQGPEKIKAC 458
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 1 MW----RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
MW + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++ +TILAP
Sbjct: 135 MWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAP 194
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
+SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I IRR+T S
Sbjct: 195 TNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVS 254
Query: 117 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P S IA+GSE SGG+++V AE I N + +KT +GRG ++R++ + + ++
Sbjct: 255 PTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMKR 314
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNI 234
+ GD HPDDK++PNA+PVV I+ +DV T V +++ +QG++ +PF GIC++N+
Sbjct: 315 VFWMTGDYKSHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFRGICVANV 374
Query: 235 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
++ P C+D+ G + V P PC L + GAC
Sbjct: 375 TAD-LSKSRKYPWNCADIEGVSANVSPAPCDPLQGAHD-GAC 414
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/262 (47%), Positives = 174/262 (66%), Gaps = 1/262 (0%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L +TRP LIE M+S ++ IS++ NSP WN+HPVY SNV+I+ +TI AP SPNTDGI+
Sbjct: 184 LKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGIN 243
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGS 125
PDS +N IED YI +GDD +AVKSGWDEYGIAYG P+ + IRR+T SPFS IA+GS
Sbjct: 244 PDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGS 303
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
E SGG+E+V AE I + G+ +KT +GRGG++++I V + M+ + + G+ G
Sbjct: 304 EMSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIMKTMKWAFWMTGNYGS 363
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 245
H D+ ++PNALP + GI +D+ V +G ++G+ PFTGIC+SN+ +
Sbjct: 364 HADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKA 423
Query: 246 PLKCSDVSGSAYQVKPWPCSEL 267
P C+D++G V P PC L
Sbjct: 424 PWTCTDIAGITSGVVPQPCDLL 445
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 181/279 (64%), Gaps = 3/279 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L TRP LIE M S +I ISN+ NSP WN+HPVYCSNVV++ +TILAP SPN
Sbjct: 56 FRAGELNHTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPN 115
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +N I+D YI +GDD VAVKSGWDEYGIA+G P+ + IRR+T SP S
Sbjct: 116 TDGINPDSCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTCISPTSAV 175
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+E+V AE I + G+ +KT +GRGG++++I V + ++ + +
Sbjct: 176 IALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMT 235
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD+ ++PNA+PV+ I +DV V + ++G+ PFTGIC+SN+ +
Sbjct: 236 GNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISNVTIGLAR 295
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGACS 277
CSDV+G +V P PC LS + GAC+
Sbjct: 296 NRKKLQWNCSDVAGITSEVTPKPCDLLSDQGPGKIGACN 334
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/269 (49%), Positives = 182/269 (67%), Gaps = 6/269 (2%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L +RP+L+E + S +++SN+ F N+P ++IHPVYCS+V I+ V+I P +SP
Sbjct: 290 YSTHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPPESPY 349
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
T GI PDSS NVCIED ++ G D +++KSGWDEYGIAYG P+ + IRRV + FSG
Sbjct: 350 TVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVHLHA-FSGS 408
Query: 121 -IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
+A GS+ SGG+ NVL EH +L+N GI +T GRGG+++ I +SD+ MEN I
Sbjct: 409 ALAFGSDMSGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSDIQMENVHTAIAA 468
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G+ G HPDDKF+PNALP ++ IT+KDV GT + +G I G++ SPFT ICLSNI L
Sbjct: 469 TGNCGSHPDDKFDPNALPHLDHITLKDVTGTNISIAGNIAGIEESPFTNICLSNITLS-- 526
Query: 240 AGPTSP-PLKCSDVSGSAYQVKPWPCSEL 267
SP +CS+VSG + V P PC EL
Sbjct: 527 TNSVSPITWECSNVSGFSDSVLPEPCPEL 555
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 181/264 (68%), Gaps = 3/264 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R++TL +TR +++E + S++I+ISN+ F+NSPFW IHPVYC NVV++ +TIL P D+PN
Sbjct: 131 FRKKTLNYTRGHMLELIESKNILISNLTFKNSPFWTIHPVYCKNVVVKSLTILNPFDAPN 190
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSS +VCIED YIS GDD +++KSGWD++G ++ PS I ++R+ S S G
Sbjct: 191 TDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQRILAFSRSSAG 250
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I+ GSE SGG+ +V + + + G+ +KT +GRGG++R I+V ++ + + R I +
Sbjct: 251 ISFGSEMSGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVLHSIRTAIAVM 310
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPD+ +N A P++ I +K++ G + Q+GL GL+ SPF I L+NI LQ
Sbjct: 311 GNYGEHPDENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIHLANIALQ--V 368
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPC 264
T CSDV+GS V P PC
Sbjct: 369 NTTKQIWNCSDVAGSYIFVFPQPC 392
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 181/270 (67%), Gaps = 3/270 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF +S +++SN+ F N+P ++IHPVYCSNVV++ +++ AP +SP
Sbjct: 167 FESHSLNYSRPHLVEFTSSDYVVVSNLTFLNAPAYSIHPVYCSNVVVQNISVSAPGESPY 226
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T GI PDSS+NVCIEDS I G D +++KSGWDEYGIAY P++ + IRRV SS S
Sbjct: 227 TIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRRVYLQSSSGSS 286
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ NV E +++YN GI +T GRGG+I+ I +SDV ++N
Sbjct: 287 VAFGSEMSGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVELKNTNTAFGAI 346
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G HPDD F+PNA+PV++ IT++ V G+ + +G GL SPFT +CL N++L
Sbjct: 347 GDCGSHPDDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLCLFNVSL--AI 404
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
T P CS+V G + V P PC EL SS
Sbjct: 405 RNTLSPWTCSNVVGFSESVSPEPCPELESS 434
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/270 (48%), Positives = 182/270 (67%), Gaps = 3/270 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF +S +++SN+ F N+P +NIHPVYCSNV+++ +++ AP +SP
Sbjct: 165 FESHSLNYSRPHLVEFTSSDLVVVSNLTFLNAPAYNIHPVYCSNVLVQNISVSAPGESPY 224
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T GI PDSS+NVCIEDS I G D +++KSGWDEYGIAY P+ + IRRV SS S
Sbjct: 225 TIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDVHIRRVYLQSSSGSS 284
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ NV E + LYN GI +T GRGG+I+ I +S+V ++N
Sbjct: 285 IAFGSEMSGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIISNVELKNINMAFGAI 344
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G HPDD F+PNA+P+++ IT+++V G+ + +G GL SPFT ICL N++L A
Sbjct: 345 GDCGSHPDDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPFTSICLFNVSLTIPA 404
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
TS CS+V G + V P PC EL+SS
Sbjct: 405 --TSTSWTCSNVIGFSEFVSPEPCPELNSS 432
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/270 (47%), Positives = 173/270 (64%), Gaps = 1/270 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L +TR L+E + SR IIISNV F ++P WN+HP YC+NV I VTILAP SPN
Sbjct: 86 FHAKELDYTRGYLLELLYSRDIIISNVTFVDAPSWNLHPTYCTNVTISGVTILAPVHSPN 145
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDSSS+V IED YI +GDD +AVKSGWDEYGI + PS I +RR+T SP S
Sbjct: 146 TDGIDPDSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHIVVRRLTCISPTSAM 205
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V E N + +K+ +GRGGF+R++ V + + + +
Sbjct: 206 IALGSEMSGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVRRLSLHTMKWVFWMT 265
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD+ +P ALP V GI +DV+ V +G ++G+ N P+TGIC+SN+ Q
Sbjct: 266 GNYGQHPDNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAP 325
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
C+DV G AY V P PC EL +
Sbjct: 326 KAKKLQWNCTDVQGVAYGVSPEPCPELGAE 355
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 187/282 (66%), Gaps = 8/282 (2%)
Query: 1 MW----RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
MW + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++ +TILAP
Sbjct: 184 MWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAP 243
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
+SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I IRR+T S
Sbjct: 244 TNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVS 303
Query: 117 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P S IA+GSE SGG+++V AE I N G+ +KT +GRG +++++ V + + +
Sbjct: 304 PTSAVIALGSEMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMKW 363
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNI 234
+ G+ HPDDK++PNA+PVV+ I+ +DV T V +++ ++G++ +PF GIC++N+
Sbjct: 364 VFWMTGNYKSHPDDKYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFKGICVANV 423
Query: 235 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
++ P C+DV G + V P PC L + GAC
Sbjct: 424 TAD-LSKSRKYPWTCADVEGVSVNVSPAPCQPLQGAHD-GAC 463
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/271 (49%), Positives = 182/271 (67%), Gaps = 2/271 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
++ +L +TRPNLIEF++S +IISN+ F +SP W IHPVYCSNV I+ +T APA+ P
Sbjct: 228 LFNSNSLNYTRPNLIEFVDSVDVIISNLTFLDSPAWGIHPVYCSNVQIQNITYRAPAEFP 287
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFS 119
T GI PDSS NVCIE+S ISTG D + +KSGWD+YGIAYG P+S + I V SS +
Sbjct: 288 YTSGIVPDSSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNVHISNVYLQSSSGA 347
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+A GSE SGG+ ++AE +++ N +GI +KT GRGG++R I +SD +EN GI +
Sbjct: 348 GLAFGSEMSGGISVIIAEKLHILNSPIGIELKTTRGRGGYMRGIFISDAELENISLGISM 407
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G G HPDDK++ ++LPVV IT K+V G + +G G+ SPF+ ICLSN+
Sbjct: 408 TGYSGFHPDDKYDTSSLPVVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLS 467
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
+ P SP CS+V G + V P PC ++ SS
Sbjct: 468 SEP-SPSWFCSNVIGFSEHVIPEPCPDIQSS 497
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/267 (47%), Positives = 177/267 (66%), Gaps = 1/267 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L +TRP LIE M S +I ISN+ NSP WN+HPVYCSNVV++ +TILAP SPN
Sbjct: 179 FRAGELNYTRPYLIEIMFSTNIQISNLTLINSPSWNVHPVYCSNVVVQGLTILAPVRSPN 238
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +N IED YI +GDD VAVKSGWDEYGI++G P+ + IRR+T SP S
Sbjct: 239 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPTSAV 298
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+E+V AE I + G+ +KT +GRGG++++I V + ++ + +
Sbjct: 299 IALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTMKWVFWMT 358
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD+ ++PNA+PV+ I +DV V + ++G+ PFTGIC+SN+ +
Sbjct: 359 GNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISNVTIGLAQ 418
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
C+DV+G +V P PC+ L
Sbjct: 419 NSKKLQWNCTDVAGITSEVNPKPCALL 445
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 194/279 (69%), Gaps = 5/279 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP+L+E M S S++ISN+ F+NSPFWNIHPVYCS V++ +VTILAP DSPN
Sbjct: 169 FHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PFSG 120
TDGI+PDSS+NVCI Y+ GDD++ +KSGWDEYGI++ SS I+I +TG + +G
Sbjct: 229 TDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ V AE + + N GI +KT GRGG++RN+ ++DV M N I+I
Sbjct: 289 IAIGSEMSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRIT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPD K++ NALP+++ ITI++V G V +G+++G++ F+ IC+SN++L +
Sbjct: 349 GNYGEHPDSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSL---S 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGACSN 278
+ P CS + G + V P C +L + ++T C N
Sbjct: 406 VRSRYPWNCSRIQGYSNSVTPESCEQLKTDCEETPICYN 444
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 126/278 (45%), Positives = 177/278 (63%), Gaps = 3/278 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ ++ L +TRP LIE M S I ISN+ NSP WN+HPVY SN++I+ +TI+AP SPN
Sbjct: 181 FHKKKLKYTRPYLIELMFSDQIQISNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPVPSPN 240
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGI+PDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP S
Sbjct: 241 TDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPQSAA 300
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V AE I + G+ +KT +GRGG++++I V + M + +
Sbjct: 301 IALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMT 360
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G H D ++P ALP +NGI +DV V + ++G+ N PFTGIC++N+ + A
Sbjct: 361 GNYGSHADSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVTIGMAA 420
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 276
P C+D+ G V P PC+ L ++ AC
Sbjct: 421 KAKKQPWTCTDIEGITSGVTPKPCNSLPDQGPEKIKAC 458
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 173/276 (62%), Gaps = 5/276 (1%)
Query: 1 MWRQR----TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
W Q+ L +TRP LIE M S +I ISN+ F +SP WNIHPVY SN++++ VTI+AP
Sbjct: 166 FWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAP 225
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
SPNTDGI+PDS +N IED YI +GDD +AVKSGWDEYGI++G P+ + IRR+T S
Sbjct: 226 VKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCIS 285
Query: 117 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P+S IA+GSE SGG+E+V AE I Y G+ +KT +GRG F++NI V + + +
Sbjct: 286 PYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKW 345
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+ G+ H D ++P+ALP + GI +D+ V +G ++G+ PFTGIC+SN
Sbjct: 346 VFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNAT 405
Query: 236 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
+ A CSDV G V P PC L +
Sbjct: 406 ISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQE 441
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 175/271 (64%), Gaps = 1/271 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ ++ L TRP +IE M S I ISN+ NSP W +HP+Y SN++I +TILAP DSPN
Sbjct: 181 FHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPN 240
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +NV IED++I +GDD +A+KSGWDEYGI G PS I IRR+T SP S
Sbjct: 241 TDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAM 300
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A+GSE SGG+++V E + N I +K+ +GRG F+++I V + + + +
Sbjct: 301 VALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMT 360
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G GDHPD+ F+PNALP ++GI +DV V +G ++G+ N PFTGIC+SN+ ++ A
Sbjct: 361 GSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSA 420
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
P C+D+SG V P PC L +
Sbjct: 421 HKKKLPWNCTDISGVTSNVVPKPCELLQEKE 451
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 173/276 (62%), Gaps = 5/276 (1%)
Query: 1 MWRQR----TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
W Q+ L +TRP LIE M S +I ISN+ F +SP WNIHPVY SN++++ VTI+AP
Sbjct: 166 FWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKGVTIIAP 225
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
SPNTDGI+PDS +N IED YI +GDD +AVKSGWDEYGI++G P+ + IRR+T S
Sbjct: 226 VKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCIS 285
Query: 117 PFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P+S IA+GSE SGG+E+V AE I Y G+ +KT +GRG F++NI V + + +
Sbjct: 286 PYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKW 345
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+ G+ H D ++P+ALP + GI +D+ V +G ++G+ PFTGIC+SN
Sbjct: 346 VFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNAT 405
Query: 236 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
+ A CSDV G V P PC L +
Sbjct: 406 ISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQE 441
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 175/274 (63%), Gaps = 4/274 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L TRP +IE + S I ISN+ NSP W +HP Y SN++I+ +TILAP DSPN
Sbjct: 176 FHNKQLKITRPYMIEILYSDQIQISNLTLINSPSWFVHPTYSSNIIIKGLTILAPVDSPN 235
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDSS+NV IED+YI +GDD +A+KSGWD+YGI +G PS I IRR+T SP S
Sbjct: 236 TDGIDPDSSTNVRIEDNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAM 295
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKI 179
IA+GSE SGG+ENV E + N + +K+ +GRGG++++I V V + R +
Sbjct: 296 IALGSEMSGGIENVRVEDVTAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWL 355
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN--INLQ 237
G GDHPD+ F+P ALP + GI +DV V +G ++G+ N PFTGIC+SN I L
Sbjct: 356 TGSYGDHPDNGFDPKALPKITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELS 415
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
+ P C+DVSG V P PC LS +
Sbjct: 416 ELKKKKKLPWNCTDVSGVTSNVVPKPCDLLSEKK 449
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 193/279 (69%), Gaps = 5/279 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ TL +TRP+L+E M S S++ISN+ F+NSPFWNIHPVYCS V++ +VTILAP DSPN
Sbjct: 169 FHNHTLNYTRPHLVELMYSTSVVISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPLDSPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PFSG 120
TDGI+PDSS+NVCI Y+ GDD++ +KSGWDEYGI++ SS I+I +TG + +G
Sbjct: 229 TDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETGGGAG 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ V AE + + N GI +KT GRGG++RN+ ++DV M N I+I
Sbjct: 289 IAIGSEMSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMAIRIT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPD K++ NALP+++ ITI++V G V +G+++G++ F+ IC+SN++L
Sbjct: 349 GNYGEHPDSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSLS--V 406
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS-QQTGACSN 278
P P CS + G + V P C +L + ++T C N
Sbjct: 407 RPRY-PWNCSRIQGYSNSVTPESCEQLKTDCEETPICYN 444
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 178/267 (66%), Gaps = 1/267 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L ++RP+L+EF +S I+ISN+ F NSP W IHPVYCSNV + +TI D+P
Sbjct: 163 FRSNKLNYSRPHLVEFEDSEEIVISNLTFLNSPAWAIHPVYCSNVTVNNITIQTSLDAPL 222
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SG 120
+DGI PDS SNVCIEDS IS D +++KSGWD YGI +G P+S I I RV + +
Sbjct: 223 SDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICRVDLQASLGAA 282
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A+GSE SGG+ +V +H++++ G+ +T GRGG+IR++ +SDV ME+ I+
Sbjct: 283 LALGSEMSGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQMEDVHVAIEFT 342
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD HPD+ F+P+ALPV++GIT+K++ GT + +G++ G+ PFT ICLSN+N
Sbjct: 343 GDWSSHPDEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDICLSNVNFSIPD 402
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
S CS++SG + V P PC++L
Sbjct: 403 SAHSTSWSCSNISGYSELVFPEPCTDL 429
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/272 (47%), Positives = 173/272 (63%), Gaps = 1/272 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ Q L TRP LIE M S I IS + NSP W +HPVY SN++I+ +TI AP DSPN
Sbjct: 174 FHQGQLTLTRPYLIEIMYSDQIQISFLTLVNSPTWFVHPVYSSNIIIKGLTIKAPVDSPN 233
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS SN+ IED I++GDD +AVKSGWDEYGI +G P+ + IRR+T SP S
Sbjct: 234 TDGINPDSCSNIRIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVSPDSAM 293
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ +V AE + N + +KT IGRGG+++NI V + + + I
Sbjct: 294 IALGSEMSGGIYDVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNLNTMKYVFWIT 353
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G GDHPD ++P ALP + GI +DV T V +S ++G+ N PFTGIC+SN+++Q
Sbjct: 354 GTYGDHPDPGYDPKALPYITGINYRDVVATNVTKSARLEGISNDPFTGICISNVSIQVSE 413
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 272
CS++SG V P+PC+ L Q
Sbjct: 414 QQKKLQWNCSNISGVTSNVTPYPCALLPEKGQ 445
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 171/269 (63%), Gaps = 1/269 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L +TR L+E + S IIISNV F ++P WN+HP YC+NV I VTILAP SPN
Sbjct: 170 YHAKELTYTRGYLLELLYSHDIIISNVTFVDAPSWNLHPTYCTNVTISGVTILAPVHSPN 229
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDSSS V IED YI +GDD +AVKSGWDEYGI + PS I +RR+T SP S
Sbjct: 230 TDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVVRRLTCISPTSAM 289
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V AE N + +K+ +GRGGF++++ V + + + +
Sbjct: 290 IALGSEMSGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGLSLHTMKWVFWMT 349
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD+ NP ALP V GI +DV+ V +G ++G+ N P+TGIC+SN+ Q
Sbjct: 350 GNYGQHPDNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAP 409
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSS 269
C+DV G A V P PC EL +
Sbjct: 410 DAKKLQWNCTDVKGVASGVSPKPCPELGA 438
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 174/275 (63%), Gaps = 1/275 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L FTR +L+E + S +IIISNV F ++P+WN+HP YC+NV I VTILAP +SPN
Sbjct: 171 FHAKELKFTRGHLLELLYSDNIIISNVTFVDAPYWNLHPTYCTNVTISGVTILAPVNSPN 230
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDSSS V IED YI +GDD VAVKSGWDEYGI + PS I IRR+T SP S
Sbjct: 231 TDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRRLTCVSPTSAM 290
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ +V AE N + VK+ GRGGF+R+I V + + + +
Sbjct: 291 IALGSEMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSLHTMKWVFWMT 350
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD+ +PNA+P V GI DV+ V +G ++G+ P+TGIC+SN+ +
Sbjct: 351 GNYGQHPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGICISNVTARLAP 410
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 275
C++V G V P PC EL++ + A
Sbjct: 411 DAKELQWNCTNVKGVTSHVSPKPCPELAAEGKPCA 445
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 184/280 (65%), Gaps = 5/280 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L ++RP+L+EF++S I+ISN+ F NSP W+IHPVYCSNVV+ VTI D+P
Sbjct: 167 FRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPL 226
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SG 120
GI PDS SN+CIEDS IS D +++KSGWD+ GIA+G P+S I I R+ S +
Sbjct: 227 NHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAA 286
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ ++ A+ + +++ G+ KT GRGG+IR+ +SDV ME+ I
Sbjct: 287 LAFGSEMSGGISDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFT 346
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN--LQG 238
GD HPDD+F+P ALPVV+ IT+K++ GT++ +G++ G+ PFT ICLSNIN L
Sbjct: 347 GDWPSHPDDQFDPAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLAD 406
Query: 239 VAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGACS 277
A PTS CS+VSG + V P PC +L + S CS
Sbjct: 407 SASPTS-HWSCSNVSGYSELVFPEPCLDLQTQSSDASVCS 445
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/270 (50%), Positives = 194/270 (71%), Gaps = 2/270 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L +TRP+L+EF++SR+++ISN+ N+P WNI P YCSNVVI+ +T+ P DSP
Sbjct: 194 FNSHSLNYTRPHLVEFVSSRNVVISNLTLLNAPGWNIRPAYCSNVVIQNLTVYTPQDSPF 253
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T+GI PDSS +VCIE+S IS G D + +KSGWDEYGI+YG P+S + IRRV S+ +G
Sbjct: 254 TNGIVPDSSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRRVRLQSAAGAG 313
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A+GSE SGG+ +VL E +L++ GI +KT GRGGFI++I +S+V M+N + GIK
Sbjct: 314 VALGSEMSGGISDVLVELSSLHDSLFGIELKTARGRGGFIKDILISNVVMDNLQVGIKAT 373
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G HPD+K++P++LP V+GIT +D+ GT + +G GL SPFT ICLSNI++ +
Sbjct: 374 GYSDMHPDEKYDPSSLPTVSGITFEDIVGTNISIAGNFTGLSESPFTSICLSNISISISS 433
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS 270
P++P L CS++SGS+ V P PC EL S
Sbjct: 434 DPSTPWL-CSNISGSSKNVSPEPCPELQGS 462
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/278 (47%), Positives = 185/278 (66%), Gaps = 6/278 (2%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF+ S I++SN+ F N+P +NIHPVYCSNV+++ +++ AP +SP
Sbjct: 165 FNSHSLNYSRPHLVEFIESERIVVSNLTFLNAPAYNIHPVYCSNVLVQNMSLSAPPESPQ 224
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T GI PDSS+NVCIE+S I G D +++KSGWDEYGIAY + + IRRV SS S
Sbjct: 225 TIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRATRDVHIRRVHLQSSSGSS 284
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA GSE SGG+ NV E ++LYN GI +T GRGG+I+ I +SDV +EN +
Sbjct: 285 IAFGSEMSGGISNVHVEQVHLYNSFSGIGFRTTKGRGGYIKRIFISDVELENINLALGAI 344
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G HPDDKF+P A+PVV+ IT++++ GT + +G G+++SPFT +CL NI L
Sbjct: 345 GDHGLHPDDKFDPKAVPVVDQITLQNLTGTNISTAGNFTGIQDSPFTSLCLFNITLM--- 401
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSS--SQQTGAC 276
+S CS+V G + V P PC EL S S + AC
Sbjct: 402 VSSSNSWTCSNVIGYSDSVFPVPCPELKSPYSNSSSAC 439
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
Query: 1 MWRQR----TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
MW + L +TR LIE M+S +++ISNV NSP WNIHPVY SN+V++ VTILAP
Sbjct: 181 MWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYSSNIVVQGVTILAP 240
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGIAYG PS I +RR+T S
Sbjct: 241 THSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVVRRLTCVS 300
Query: 117 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P S IA+GSE SGG+ +V AE I N + +KT +GRG ++R++ V + ++ +
Sbjct: 301 PTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGMSLDTMKW 360
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNI 234
+ G+ HPDD ++PNA+PVV+ I+ +DV T V +++ ++G++ +PF GIC++N+
Sbjct: 361 VFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFRGICIANV 420
Query: 235 NLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
++ P C+D+ G + V P PC L + GAC
Sbjct: 421 TAT-LSKSRKYPWTCTDIEGVSTGVTPAPCQPLQGAHD-GAC 460
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 180/268 (67%), Gaps = 2/268 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
++ +L ++RPNLIEF++S IIISN+ F +SP W IHPV+CSNV I+ +T APA+ P
Sbjct: 183 LFSSNSLNYSRPNLIEFVDSVDIIISNLTFLDSPAWGIHPVHCSNVQIQNITSRAPAEFP 242
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFS 119
T GI PDSS VCIE+S ISTG D V +KSGWD+YGIAYG P+S + I V SS +
Sbjct: 243 YTSGIVPDSSRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSSSGA 302
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+A GSE SGG+ +++AE +++ N +GI +KT GRGG++R I +SD +EN GI +
Sbjct: 303 GLAFGSEMSGGISDIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLGISM 362
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G G HPDDK++ +ALP+V IT K+V G + +G G+ SPF+ ICLSN+
Sbjct: 363 TGYSGFHPDDKYDTSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTFSLS 422
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
+ P SP CS+V G + V P PC +L
Sbjct: 423 SEP-SPSWFCSNVIGFSEDVIPEPCPDL 449
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 174/267 (65%), Gaps = 1/267 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++++ TRP LIE + S++I ISN+ +SP WNIHPVYC++V+++ VT+LAP PN
Sbjct: 172 FKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPN 231
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGI+PDS +N IED YI +GDD +AVKSGWD+YGI +G P+ ++IRR+T SP S G
Sbjct: 232 TDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAG 291
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A+GSE SGG+++V E + L N I +KT +GRG ++++I + M+ + ++
Sbjct: 292 VALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMS 351
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD+ F+P ALP + I +D+ V S + G+ PFTGIC+SN+ + A
Sbjct: 352 GNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAA 411
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
C+DV+G +V P PCS L
Sbjct: 412 KAKKMQWNCTDVAGVTSRVTPEPCSLL 438
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/274 (45%), Positives = 177/274 (64%), Gaps = 2/274 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R +TL TR +L+E + ++ I+ISN+ FQNSPFW IHPVY NVV++ VTIL P +SPN
Sbjct: 211 FRSKTLEHTRGHLLELIEAQDILISNLTFQNSPFWTIHPVYSKNVVVKRVTILNPLNSPN 270
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSS VCIED YIS GDD +++KSGWD+YG +G PS I I+RV S S G
Sbjct: 271 TDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQRVVAFSHTSAG 330
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I+ GSE SGG+ ++ + + + N G+ KT++GRG +IRN+TV+++ M R I +
Sbjct: 331 ISFGSEMSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVMHTVRTAIAVM 390
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G+HPD+ +N A PV+ I + ++ G + Q+GL+ GL ++PF I L+ + L
Sbjct: 391 GNYGEHPDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIHLTKVVLD-TR 449
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 274
P CS V+G V P PC EL+ G
Sbjct: 450 TTKQGPWNCSWVTGFYNFVLPKPCPELTMENSNG 483
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 183/280 (65%), Gaps = 5/280 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L ++RP+L+EF++S I+ISN+ F NSP W+IHPVYCSNVV+ VTI D+P
Sbjct: 167 FRSNKLNYSRPHLVEFVDSEQIVISNITFLNSPAWSIHPVYCSNVVVHSVTIQTSLDAPL 226
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SG 120
GI PDS SN+CIEDS IS D +++KSGWD+ GIA+G P+S I I R+ S +
Sbjct: 227 NHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQSSLGAA 286
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+ GSE SGG+ +V A+ + +++ G+ KT GRGG+IR+ +SDV ME+ I
Sbjct: 287 LTFGSEMSGGISDVHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDVDVAIAFT 346
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN--LQG 238
GD HPDD+F+P ALPVV+ IT+K++ GT++ +G++ G+ PFT ICLSNIN L
Sbjct: 347 GDWPSHPDDQFDPTALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNINFSLAD 406
Query: 239 VAGPTSPPLKCSDVSGSAYQVKPWPCSEL-SSSQQTGACS 277
A PTS CS+VSG + V P PC +L + S CS
Sbjct: 407 SASPTS-HWSCSNVSGYSELVFPEPCLDLQTQSSDASICS 445
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 169/277 (61%), Gaps = 4/277 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++ L TRP +IE M S + ISN+ NSP WN+HPVYC +V+IR +TILAP SPN
Sbjct: 137 YKSNELTQTRPYMIELMYSNGVQISNLTLLNSPNWNVHPVYCRDVIIRGLTILAPTHSPN 196
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDS SNV IE +YI +GDD +A+KSGWDEYGI + P+ + IR +T SP S
Sbjct: 197 TDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRHLTCISPTSAT 256
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG++NV AEHI + GI VKT+ GRG F+RNI V + M+ + +
Sbjct: 257 IALGSEMSGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIYVRKMTMKTMKYVFWMT 316
Query: 181 GDVGD---HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
G HPD +NP ALPV+ GI D+ V G ++G+K F GICLSN+ +
Sbjct: 317 GYYSSSRVHPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGIKEDVFKGICLSNVTIG 376
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 274
P C+++ G A V P PC L S+ G
Sbjct: 377 LAKKPKEMLWNCTNIEGVASGVTPQPCGFLRESKAMG 413
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 175/275 (63%), Gaps = 1/275 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L TR +L+E ++S +IIISNV F ++P+WN+HP YC+NV I VTILAP +SPN
Sbjct: 171 FHAKELKSTRGHLLELLHSDNIIISNVTFVDAPYWNLHPTYCTNVTISGVTILAPLNSPN 230
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDSS++V IED YI +GDD VAVKSGWDEYGI + PS I IRR+T SP S
Sbjct: 231 TDGIDPDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRRLTCISPTSAM 290
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ +V AE N + +K+ GRGGF+++I V + + + +
Sbjct: 291 IALGSEMSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSLHTMKWVFWMT 350
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD+ NPNA+P V GI DV+ V +G ++G+ N P+TGIC+SN+
Sbjct: 351 GNYGQHPDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGICISNVTASLAP 410
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGA 275
T C++V G V P PC EL + + A
Sbjct: 411 NATELQWNCTNVKGVTSNVSPKPCPELGAEGKPCA 445
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 171/271 (63%), Gaps = 1/271 (0%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L TRP LIE M S I IS++ NSP W +HP+Y NV+I+ +TILAP DSPNTDGID
Sbjct: 185 LNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGID 244
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGS 125
PDS SN IED +I +GDD +AVKSGWD+YGI +G P+ + I+R+T SP S G+A+GS
Sbjct: 245 PDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGS 304
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
E SGG+ NV E+ N + +KT GRGGF+++I V +Y+ + + G+
Sbjct: 305 EMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKS 364
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 245
HPDDKF+P ALP + I +DV V S ++G+ PFT IC+SN+ + A P
Sbjct: 365 HPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKL 424
Query: 246 PLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
C+DV G + V P PC+ L+ + ++G C
Sbjct: 425 QWNCTDVEGFSSDVVPPPCAPLAKAGKSGGC 455
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 166/259 (64%), Gaps = 1/259 (0%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 69
TRP LIE + S I ISN+I NSP WN+HP Y SNV+I+ +TILAP DSPNTDGI+PDS
Sbjct: 187 TRPYLIELLYSHKIQISNLILINSPSWNVHPTYSSNVLIQGLTILAPVDSPNTDGINPDS 246
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSETS 128
+N IED YI +GDD +AVKSGWD+YGI +G P+ + IRR+T SP S IA+GSE S
Sbjct: 247 CTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCISPDSATIALGSEMS 306
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GG+++V AE I N GI +KT GRG ++++I V + + + + G G HPD
Sbjct: 307 GGIQDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKYVFWMTGSYGSHPD 366
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
++PNALP++ I +D+ V S ++G++ PFTGIC+SN N+ P
Sbjct: 367 KGYDPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNANITLTKKPEKLQWN 426
Query: 249 CSDVSGSAYQVKPWPCSEL 267
C+D+ G V P PCS L
Sbjct: 427 CTDIEGVTSNVNPRPCSLL 445
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 171/271 (63%), Gaps = 1/271 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+++ L TRP LIE M S + ISN+ F NSP WN+HP+Y SNV+I+ +TILAP DSPN
Sbjct: 182 FKKNQLDVTRPYLIEIMYSNQVQISNLTFVNSPSWNVHPIYSSNVIIQGLTILAPVDSPN 241
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDS +++ IED YI +GDD +AVKSGWD+YGI G P+ + IRRVT SP S
Sbjct: 242 TDGIDPDSCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLVIRRVTCISPDSAT 301
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ +V AE I + G+ +KT +GRGG++++I V + M+ + +
Sbjct: 302 IALGSEMSGGIRDVRAEDITAIDTQSGVRIKTGVGRGGYVKDIYVRRMTMKTMKYVFWMT 361
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD F+P ALP ++GI +D+ V S + G+ N PF GIC+ N+ +
Sbjct: 362 GSYGQHPDPGFDPKALPDIHGINYRDMVAENVTYSARLDGIPNDPFKGICIFNVTITLTK 421
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
P C+DV G +V P CS L +
Sbjct: 422 KPKELQWNCTDVQGVTSRVTPPACSLLPEKK 452
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 171/271 (63%), Gaps = 1/271 (0%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L TRP LIE M S I IS++ NSP W +HP+Y NV+I+ +TILAP DSPNTDGID
Sbjct: 185 LNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQGLTILAPIDSPNTDGID 244
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGS 125
PDS SN IED +I +GDD +AVKSGWD+YGI +G P+ + I+R+T SP S G+A+GS
Sbjct: 245 PDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGS 304
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
E SGG+ NV E+ N + +KT GRGGF+++I V +Y+ + + G+
Sbjct: 305 EMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKS 364
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 245
HPDDKF+P ALP + I +DV V S ++G+ PFT IC+SN+ + A P
Sbjct: 365 HPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNVKIGLTATPKKL 424
Query: 246 PLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
C+DV G + V P PC+ L+ + ++G C
Sbjct: 425 QWNCTDVEGFSSDVVPPPCAPLAKAGKSGGC 455
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 171/268 (63%), Gaps = 1/268 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
++ Q L +TRP LIE M S I IS++ NSP WN+HPVY SN++I+ +TI+AP SP
Sbjct: 191 LFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGITIIAPVRSP 250
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+PDS +NV IED YI +GDD VAVKSGWDEYGI++G P+ + +RR+T SP S
Sbjct: 251 NTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSA 310
Query: 121 -IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
IA+GSE SGG+E+V AE I + G+ +KT IGRGG++++I V + M + +
Sbjct: 311 VIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWM 370
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
GD G H D ++P+ALPV+ GI KD+ + ++G+ FT IC+SN+ +
Sbjct: 371 TGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVTIGLA 430
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
P C+D+ G QV P PC L
Sbjct: 431 PKAKKQPWTCTDIEGITSQVTPPPCDLL 458
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 171/268 (63%), Gaps = 1/268 (0%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
++ Q L +TRP LIE M S I IS++ NSP WN+HPVY SN++I+ +TI+AP SP
Sbjct: 191 LFHQGKLKYTRPYLIELMYSSDIQISSLTLLNSPAWNVHPVYSSNILIQGITIIAPVRSP 250
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+PDS +NV IED YI +GDD VAVKSGWDEYGI++G P+ + +RR+T SP S
Sbjct: 251 NTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISPTSA 310
Query: 121 -IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
IA+GSE SGG+E+V AE I + G+ +KT IGRGG++++I V + M + +
Sbjct: 311 VIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWAFWM 370
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
GD G H D ++P+ALPV+ GI KD+ + ++G+ FT IC+SN+ +
Sbjct: 371 TGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVTIGLA 430
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
P C+D+ G QV P PC L
Sbjct: 431 PKAKKQPWTCTDIEGITSQVTPPPCDLL 458
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 126/272 (46%), Positives = 175/272 (64%), Gaps = 1/272 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L +TR L+E + S +IIISNV F +SP WN+HP YC+NV I +TILAP +SPN
Sbjct: 166 FHAKELTYTRGYLLELLYSNNIIISNVTFVDSPSWNLHPTYCTNVTISGITILAPLNSPN 225
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDSSS+V IEDSYI +GDD +AVKSGWD+YGI + PS I IRR+T SP S
Sbjct: 226 TDGIDPDSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRRLTCISPTSAM 285
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ +V A + + +K+ +GRGG+++++ V + + + +
Sbjct: 286 IALGSEMSGGIRDVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLSLHTMKWVFWMT 345
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD+ +PNALP V GI DV+ V +G ++G+ N P+TGIC+SN+ Q
Sbjct: 346 GNYGQHPDNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGICMSNVTAQLAP 405
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 272
C+DV G A V P PC EL ++ +
Sbjct: 406 DAKKLQWNCTDVKGVASDVSPVPCPELGAAGK 437
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 182/267 (68%), Gaps = 1/267 (0%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
+L ++RP++IE + S +I ISN+ F NSP W+IHPVYCSNV I+ +T+ AP + P T G
Sbjct: 169 HSLNYSRPHIIELVGSDNITISNLTFLNSPAWSIHPVYCSNVQIQKITVHAPTEFPYTSG 228
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAV 123
I PDSS +VCI +S ISTG D + +KSGWD+YG+AYG P+S + IR V SS +G+A
Sbjct: 229 IVPDSSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRGVYLQSSSGAGLAF 288
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
GSE SGG+ +++AE +++ N +GI +KT GRGG+++NI +SD +EN GI + G
Sbjct: 289 GSEMSGGISDIIAEQLHITNSTIGIELKTTKGRGGYMKNIFISDAKLENIYLGISMTGSS 348
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
G HPDDK++PNA+P V +T ++V GT + +G G+ +SPFT ICL N + +
Sbjct: 349 GSHPDDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSPFTPICLLNATFSSSSESS 408
Query: 244 SPPLKCSDVSGSAYQVKPWPCSELSSS 270
SP CSD+ G + +V P PC +L ++
Sbjct: 409 SPSWFCSDIMGISEEVFPEPCPDLQNT 435
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 175/276 (63%), Gaps = 1/276 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L TRP LIE M S + ISN+I +SP WN+HP Y SNV+I+++TI+AP SPN
Sbjct: 171 FRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPN 230
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDSS NV IED +I +GDD +AVKSGWD+YGI +G P+ + IRR+T SP S
Sbjct: 231 TDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISPDSAV 290
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG++NV AE+I + G+ +K+ +GRGG++++I + M+ + +
Sbjct: 291 IALGSEMSGGIKNVRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYVFWMT 350
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G HPDD ++P ALP + I +D+ V S + G+ PFTGIC+SN+ +
Sbjct: 351 GDYGQHPDDGWDPKALPKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVKIGLTE 410
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
P C++V G + QV P C L S++ C
Sbjct: 411 KPKKLQWNCTNVEGVSSQVTPPSCDLLHPSKKVFNC 446
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/271 (45%), Positives = 176/271 (64%), Gaps = 5/271 (1%)
Query: 2 WRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W+Q + L +TRP LIE M S I ISN+ F NSP WN+HPVY SN++I+ +TI+AP
Sbjct: 193 WQQFYNKRLNYTRPYLIELMFSDKIQISNLTFLNSPSWNVHPVYSSNIIIKGLTIIAPVP 252
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDE+GI +G P+ + IRR+T SP
Sbjct: 253 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISPQ 312
Query: 119 S-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
S IA+GSE SGG+++V AE I + G+ +KT+IGRGG++++I V + M +
Sbjct: 313 SAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWAF 372
Query: 178 KIAGDVGDHPDD-KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+ G+ G + ++ ++P ALP + GI +DV V + ++G+ NSPFTGIC++N+ +
Sbjct: 373 WMTGNYGSYANNSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVTI 432
Query: 237 QGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
P C+D+ G V P PC+ L
Sbjct: 433 SMADKANEKPWTCTDIEGITSGVTPKPCNSL 463
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 172/271 (63%), Gaps = 1/271 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++++ TRP LIE + S++I ISN+ +SP WNIHPVYC+NV+++ VT+LAP PN
Sbjct: 172 FKKKQFKLTRPYLIELLFSKNIQISNITLIDSPSWNIHPVYCNNVIVKSVTVLAPVTVPN 231
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGI+PDS +N IED YI +GDD +AVKSGWD+YGI +G P+ ++IRR+T SP S G
Sbjct: 232 TDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAG 291
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A+GSE SGG+++V E + L N I +KT GRG ++++I + M+ + ++
Sbjct: 292 VALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYVFWMS 351
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ HPD+ F+P ALP V I +D+ V S + G+ PFTGIC+SN+ +
Sbjct: 352 GNYNSHPDEGFDPKALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVTIALAD 411
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
C+DV+G +V P PCS L +
Sbjct: 412 KAKKVQWNCTDVAGVTSRVTPEPCSLLPEKK 442
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 175/266 (65%), Gaps = 1/266 (0%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
L +RP+++EF++S ++ISN+ F NSP W+IHPVYCSNV + VTI D+P T
Sbjct: 162 HSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLT 221
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGI 121
DGI PDS SNVCIEDS IS G D +++KSGWD YGI++G P+S I I RV +S + +
Sbjct: 222 DGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAAL 281
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSE SGG+ ++ +HI + + GI +T GRGG+I + V+DV M++ I+ G
Sbjct: 282 AIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTG 341
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
+ HPDD F+P+ LPV++ IT+K++ GT + +G++ G++ PF+ ICLSN+N
Sbjct: 342 NWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADS 401
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSEL 267
S CS+V G + V P PCSEL
Sbjct: 402 APSSAWTCSNVHGYSELVFPKPCSEL 427
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 167/267 (62%), Gaps = 1/267 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L TRP +IE M S I ISN+ NSP W +HP+Y SN+ I+ +TILAP DSPN
Sbjct: 179 FHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPN 238
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP S
Sbjct: 239 TDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAM 298
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V E I N + +KT +GRGG++++I V + + + +
Sbjct: 299 IALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMT 358
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD F+P ALP + GI +DV T V S ++G+ N PFTGIC+SN+++Q
Sbjct: 359 GSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSE 418
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
C+DV+G V P C L
Sbjct: 419 QKKKLQWNCTDVAGVTSNVTPNTCQLL 445
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/271 (47%), Positives = 169/271 (62%), Gaps = 1/271 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+++ L +TRP LIE M+S I ISN+ F NSP W+IHPVY SN+ I+ +TILAP PN
Sbjct: 194 FKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSSNIYIQGLTILAPVTVPN 253
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +N IED YI +GDD +AVKSGWD+YGI YG P+ + IRR+T SP S
Sbjct: 254 TDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAV 313
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+E+V AE I N GI +KT IGRGG+++++ V + M + +
Sbjct: 314 IALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKYVFWMT 373
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPDD ++P ALPV+ I +D+ V + G+ FTGIC+SN+ +
Sbjct: 374 GSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSK 433
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
P C+DVSG V P PC L Q
Sbjct: 434 KPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQ 464
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 167/267 (62%), Gaps = 1/267 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L TRP +IE M S I ISN+ NSP W +HP+Y SN+ I+ +TILAP DSPN
Sbjct: 178 FHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPN 237
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP S
Sbjct: 238 TDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAM 297
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V E I N + +KT +GRGG++++I V + + + +
Sbjct: 298 IALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYVFWMT 357
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD F+P ALP + GI +DV T V S ++G+ N PFTGIC+SN+++Q
Sbjct: 358 GSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSIQVSE 417
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
C+DV+G V P C L
Sbjct: 418 QKKKLQWNCTDVAGVTSNVTPNTCQLL 444
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/281 (43%), Positives = 174/281 (61%), Gaps = 6/281 (2%)
Query: 2 WRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W+Q + L +TRP LIE M S I ISN+ NSP WN+HPVY SN++++ +TI+AP
Sbjct: 171 WQQFHKKKLKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVHPVYSSNIIVQGITIIAPIS 230
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI++G P+ + IRR+T SP+
Sbjct: 231 SPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPY 290
Query: 119 SG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
S IA+GSE SGG+++V AE I N + +KT +GRG ++++I V + + +
Sbjct: 291 SATIALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRRMTLHTMKWAF 350
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ G+ G H D ++ NA P + GI +DV V + ++G+ + PFTGIC+SN+ +
Sbjct: 351 WMTGNYGSHADGNYDKNAFPEITGINYRDVVAENVTMAARLEGIADHPFTGICMSNVTIG 410
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSEL--SSSQQTGAC 276
P C+D+ G V P PC L + + G C
Sbjct: 411 LAKKAKKQPWTCTDIQGITSGVTPTPCGLLPDQGTDKPGGC 451
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/272 (45%), Positives = 171/272 (62%), Gaps = 1/272 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + + TRP +IE M S I ISN+ NSP W +HPVY SN++I +TILAP D PN
Sbjct: 182 FHKGQMKITRPYMIEIMYSDQIQISNLTLINSPSWFVHPVYSSNIIINGLTILAPVDIPN 241
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDS +NV IED+YI +GDD +A+KSGWDEYGI +G PS I IRR+T SP S
Sbjct: 242 TDGIDPDSCTNVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAM 301
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A+GSE SGG+++V E + + +KT IGRG ++++I V + ++ + +
Sbjct: 302 VALGSEMSGGIQDVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMT 361
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G HPD+ F+PNALP ++ I +DV V +G + G+ N PFTGIC+SN ++ A
Sbjct: 362 GSYKSHPDNGFDPNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSA 421
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 272
P C+DVSG V P PC L+ ++
Sbjct: 422 HKKKLPWNCTDVSGVTSNVSPTPCELLAEKEK 453
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/274 (46%), Positives = 176/274 (64%), Gaps = 3/274 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
+ + L TR LI+FM SR I IS+V +NSPFW +HP C NV IR VTI+AP D+PNT
Sbjct: 179 KLKQLKHTRGRLIQFMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNT 238
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GI 121
DGIDPDS NV IE+ YIS GDD VAVKSGWD+YGI YG P + ITIR + ++P S G+
Sbjct: 239 DGIDPDSCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGV 298
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
++GSE SGG+ NV E++ ++N G+ +KT GRGG++ + ++ ME R GI I
Sbjct: 299 SIGSEMSGGITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKT 358
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D GDHPD+ ++P ALPVV I ++G++V+ I G K P G+ + ++N+ GV
Sbjct: 359 DYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMNV-GVTR 417
Query: 242 PTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS + G + + P PC +L +S + G
Sbjct: 418 KKKHVFQCSFLQGQVFGTIFPKPCEDLGTSSRPG 451
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 175/266 (65%), Gaps = 1/266 (0%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
L +RP+++EF++S ++ISN+ F NSP W+IHPVYCSNV + VTI D+P T
Sbjct: 162 HSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLT 221
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGI 121
DGI PDS SNVCIEDS IS G D +++KSGWD YGI++G P+S I I RV +S + +
Sbjct: 222 DGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQASSGAAL 281
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSE SGG+ ++ +HI + + GI +T GRGG+I + V+DV M++ I+ G
Sbjct: 282 AIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLAIEFTG 341
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
+ HPDD F+P+ LPV++ IT+K++ GT + +G++ G++ PF+ ICLSN+N
Sbjct: 342 NWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNFSIADL 401
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSEL 267
S CS+V G + V P PCSEL
Sbjct: 402 APSSAWTCSNVHGYSELVFPKPCSEL 427
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 173/281 (61%), Gaps = 6/281 (2%)
Query: 2 WRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W+Q + L +TRP LIE M S SI ISN+ NSP WN+HPVY SN++I+ +TI+AP
Sbjct: 178 WQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPIS 237
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SPF
Sbjct: 238 SPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPF 297
Query: 119 SG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
S IA+GSE SGG+++V AE I G+ +KT +GRGG++++I V M +
Sbjct: 298 SATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAF 357
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
K+ GD H D F+PNALP + I +DV V + QG+ N PF GIC++N+ L
Sbjct: 358 KMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLG 417
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 276
C+D+ G V P PC L ++ GAC
Sbjct: 418 MAVKAKKRSWTCTDIEGMTSGVTPPPCDLLPDQGPEKIGAC 458
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/260 (48%), Positives = 164/260 (63%), Gaps = 3/260 (1%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
TRP +IE M S I ISN+ NSP W +HP+Y S+++I+ +TILAP DSPNTDGIDPD
Sbjct: 124 LTRPYMIEIMYSNQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPD 183
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSET 127
S SN IED YI +GDD +AVKSGWDEYGI G PS I IRR+T SP S IA+GSE
Sbjct: 184 SCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIALGSEM 243
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGG++++ AE + N + +KT +GRG ++RNI V + + + + G G HP
Sbjct: 244 SGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSYGSHP 303
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 247
D F+P ALP + GI +DV V ++G+ N PFTGIC+SN N++ V +
Sbjct: 304 DTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIEKVGKKLA--W 361
Query: 248 KCSDVSGSAYQVKPWPCSEL 267
C+DV G V P PC+ L
Sbjct: 362 NCTDVHGVTSNVSPEPCALL 381
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 170/271 (62%), Gaps = 1/271 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+++ L +TRP LIE M+S I ISN+ F NSP W+IHPVY N+ I+ +TILAP PN
Sbjct: 193 FKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQGLTILAPVTVPN 252
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +N IED YI +GDD +AVKSGWD+YGIAYG P+ + IRR+T SP S
Sbjct: 253 TDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTKQLLIRRLTCISPDSAV 312
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+E+V AE I + GI +KT IGRGG+++++ V + M+ + +
Sbjct: 313 IALGSEMSGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKDVYVRGMTMKTMKYVFWMT 372
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD+ ++P ALPV+ I +D+ V + G+ FTGIC+SN+ +
Sbjct: 373 GSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSK 432
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
P C+DVSG V P PC L Q
Sbjct: 433 KPKKVLWNCTDVSGYTSGVTPAPCQLLPEKQ 463
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 173/281 (61%), Gaps = 6/281 (2%)
Query: 2 WRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W+Q + L +TRP LIE M S SI ISN+ NSP WN+HPVY SN++I+ +TI+AP
Sbjct: 178 WQQFHRKELKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPIS 237
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SPF
Sbjct: 238 SPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPF 297
Query: 119 SG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
S IA+GSE SGG+++V AE I G+ +KT +GRGG++++I V M +
Sbjct: 298 SATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAF 357
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
K+ GD H D F+PNALP + I +DV V + QG+ N PF GIC++N+ L
Sbjct: 358 KMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGICIANVTLG 417
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 276
C+D+ G V P PC L ++ GAC
Sbjct: 418 MAVKAKKRSWTCTDIEGMTSGVTPPPCDLLPDQGPEKIGAC 458
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 168/271 (61%), Gaps = 1/271 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+++ L +TRP LIE M+S I ISN+ F NSP W+IHPVY N+ I+ +TILAP PN
Sbjct: 193 FKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSRNIFIQSLTILAPVTVPN 252
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +N IED YI +GDD +AVKSGWD+YGI YG P+ + IRR+T SP S
Sbjct: 253 TDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISPDSAV 312
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+E+V AE I N GI +KT IGRGG+++++ V + M + +
Sbjct: 313 IALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMNTMKYVFWMT 372
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD+ ++P ALPV+ I +D+ V + G+ FTGIC+SN+ +
Sbjct: 373 GSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSK 432
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
P C+DVSG V P PC L Q
Sbjct: 433 KPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQ 463
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 180/267 (67%), Gaps = 2/267 (0%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
+L ++RP++IE + S +IIISN+ F NSP W+IHPVYCSN+ I+ +T+ AP P T G
Sbjct: 169 HSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSG 228
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAV 123
I PDSS +VCI++ ISTG D + +KSGWDEYG+AYG P+S + IR V SS +G+A
Sbjct: 229 IVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAF 288
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
GSE SGG+ +++AE +++ N GI +KT GRGG+++NI +SD +EN GI + G
Sbjct: 289 GSEMSGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKLENIYLGISMTGSS 348
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
G HPDDK++PNA+P V +T ++V G + +G G+ +SPFT ICLSN+ + +
Sbjct: 349 GSHPDDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPICLSNVTFSTSSESS 408
Query: 244 SPPLKCSDVSGSAYQVKPWPCSELSSS 270
CS+V G + +V P PC +L ++
Sbjct: 409 PSWF-CSNVMGISKEVFPEPCPDLQNT 434
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 178/266 (66%), Gaps = 4/266 (1%)
Query: 6 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 65
+L ++RP++IEF++S+ I+ISN+ F N+P NIHPVYCS + IR V I DSP+ G+
Sbjct: 168 SLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGV 227
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVG 124
PDSS NVCIEDS I+ G D V++KSGWD+YGI YG P++ + IR + SP +GI+ G
Sbjct: 228 APDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFG 287
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 184
SE SGGV +V E +N+++ +G+ +T GRGG+IRNIT+SDV + + I G G
Sbjct: 288 SEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTG 347
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
HPDDKF+ +ALPVV I +++ G + +G + G+ SPFT ICL++I+LQ +
Sbjct: 348 SHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQ---TRSE 404
Query: 245 PPLKCSDVSGSAYQVKPWPCSELSSS 270
CS+VSG + V P PC EL SS
Sbjct: 405 ESWICSNVSGFSDDVSPEPCQELMSS 430
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 174/277 (62%), Gaps = 1/277 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++Q+ L TRP LIE M S + ISN+ +SP WN+HPVYCS+V+I+ +TILAP D PN
Sbjct: 131 FKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGMTILAPVDVPN 190
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +NV IED YI +GDD +AVKSGWD+YGI YG P+ I IRR+T SP S
Sbjct: 191 TDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRRLTCISPDSAV 250
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG++NV AE I N G+ +KT +GRGG++++I + M+ + +
Sbjct: 251 IALGSEMSGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMTMKTMKYVFWMT 310
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D G HPDD+++ A+P + I ++V V S + G+ FTGIC+S++ ++
Sbjct: 311 SDYGSHPDDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGICISDVTIRLTQ 370
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
P C++V G QV P C L S+ C+
Sbjct: 371 KPKQLQWNCTNVEGVTSQVTPQSCDLLPPSKGPLQCT 407
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 178/266 (66%), Gaps = 4/266 (1%)
Query: 6 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 65
+L ++RP++IEF++S+ I+ISN+ F N+P NIHPVYCS + IR V I DSP+ G+
Sbjct: 170 SLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGV 229
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVG 124
PDSS NVCIEDS I+ G D V++KSGWD+YGI YG P++ + IR + SP +GI+ G
Sbjct: 230 APDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFG 289
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 184
SE SGGV +V E +N+++ +G+ +T GRGG+IRNIT+SDV + + I G G
Sbjct: 290 SEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTG 349
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
HPDDKF+ +ALPVV I +++ G + +G + G+ SPFT ICL++I+LQ +
Sbjct: 350 SHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQ---TRSE 406
Query: 245 PPLKCSDVSGSAYQVKPWPCSELSSS 270
CS+VSG + V P PC EL SS
Sbjct: 407 ESWICSNVSGFSDDVSPEPCQELMSS 432
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 171/276 (61%), Gaps = 1/276 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R + TRP LIE M S + ISN+ +SP WN+HPVY NV+++ +TILAP DSPN
Sbjct: 178 FRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPN 237
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS V IED +I +GDD +AVKSGWD+YG +G P+ + IRR+T SP S
Sbjct: 238 TDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSAT 297
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG++NV AE I + GI +KT IGRGG++++I V + ++ + I
Sbjct: 298 IALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYVFWIT 357
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G HPDD ++P ALPV+ I +D+ V S + G+ PFTGIC+SN+ +
Sbjct: 358 GDYGSHPDDGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTIGLTE 417
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
P C++V+G QV P C L S + C
Sbjct: 418 KPKELQWNCTNVAGVTSQVTPRSCDLLPPSDKVFNC 453
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/274 (45%), Positives = 175/274 (63%), Gaps = 3/274 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
+++ L TR LI+ M SR I IS+V +NSPFW +HP C NV IR VTI+AP D+PNT
Sbjct: 179 KRKQLKHTRGRLIQLMWSRGIEISDVTLRNSPFWTVHPYDCENVTIRGVTIIAPPDAPNT 238
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GI 121
DGIDPDS NV IE YIS GDD VAVKSGWD+YGI YG P + ITIR + ++P S G+
Sbjct: 239 DGIDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNAPVSAGV 298
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
++GSE SGG+ NV E++ ++N G+ +KT GRGG++ + ++ ME R GI I
Sbjct: 299 SIGSEMSGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRVGIVIKT 358
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D GDHPD+ ++P ALPVV I ++G++V+ I G K P G+ + ++N+ GV
Sbjct: 359 DYGDHPDEFYDPTALPVVEKIFFDGIYGSEVRIPARIYGSKEVPVRGLEIRDMNV-GVTR 417
Query: 242 PTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS + G + + P PC +L +S + G
Sbjct: 418 KKKHVFQCSFLQGEVFGTIFPKPCEDLGTSTRPG 451
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 178/266 (66%), Gaps = 4/266 (1%)
Query: 6 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 65
+L ++RP++IEF++S+ I+ISN+ F N+P NIHPVYCS + IR V I DSP+ G+
Sbjct: 168 SLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKVLIETSVDSPHVLGV 227
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVG 124
PDSS NVCIEDS I+ G D V++KSGWD+YGI YG P++ + IR + SP +GI+ G
Sbjct: 228 APDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSPTGAGISFG 287
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 184
SE SGGV +V E +N+++ +G+ +T GRGG+IRNIT+SDV + + I G G
Sbjct: 288 SEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVTNGHTG 347
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
HPDDKF+ +ALPVV I +++ G + +G + G+ SPFT ICL++I+LQ +
Sbjct: 348 SHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHLQ---TRSE 404
Query: 245 PPLKCSDVSGSAYQVKPWPCSELSSS 270
CS+VSG + V P PC EL SS
Sbjct: 405 ESWICSNVSGFSDDVSPEPCQELMSS 430
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 169/276 (61%), Gaps = 3/276 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L TRP +IE M S I ISN+ NSP W +HP+Y S+++I+ +TILAP DSPN
Sbjct: 179 FHKGELKLTRPYMIEIMFSDHIQISNLTLINSPSWFVHPIYTSDIIIQGLTILAPVDSPN 238
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDS SN+ IED YI +GDD VA+KSGWDEYGI +G PS I IRR+ SP S
Sbjct: 239 TDGIDPDSCSNIRIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSPDSAM 298
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V AE + N + +KT +GRG ++R+I + + + + +
Sbjct: 299 IALGSEMSGGIQDVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYVFWMT 358
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G HPD+ F+P LP + GI +DV V S ++G+ N PFTGIC+SN+ + +
Sbjct: 359 GSYSSHPDNGFDPKTLPNITGINYRDVIAENVTYSARLEGIANDPFTGICISNVTIH--S 416
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
G C+D+ G V P PC L Q+ C
Sbjct: 417 GKKKLQWNCTDIEGVTSNVYPKPCELLPLKQEKIEC 452
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 168/262 (64%), Gaps = 1/262 (0%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L +TRP LIE M S +I ISN+ NSP WN+HPVY +++++ +TI+AP SPNTDGI+
Sbjct: 174 LKYTRPYLIEIMFSDTIQISNLTLLNSPSWNVHPVYSRDILVQGITIIAPISSPNTDGIN 233
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGS 125
PDS +N IED YI +GDD VAVKSGWDEYGIA+G P+ + IRR+T SP+S IA+GS
Sbjct: 234 PDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIALGS 293
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
E SGG+E+V AE I + G+ +KT +GRGG++++I V + M + + G+ G
Sbjct: 294 EMSGGIEDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVFWMTGNYGS 353
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 245
H D ++PNALP++ GI +D+ V + ++G+ PF IC+SN+ +
Sbjct: 354 HADKNYDPNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEICISNVTIGLAPKAKKV 413
Query: 246 PLKCSDVSGSAYQVKPWPCSEL 267
P C+++ G V P PC L
Sbjct: 414 PWTCTEIEGMTSGVSPRPCDLL 435
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 167/259 (64%), Gaps = 1/259 (0%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 69
TRP IE M S+++ ISN+ +SP WNIHPVYC+NV+++ VTILAP DSPNTDGI+PDS
Sbjct: 191 TRPYTIEIMFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDS 250
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETS 128
+N IED Y+ +GDD +AVKSGWD++GI G P+ ++IRR+T SP S GIA+GSE S
Sbjct: 251 CTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSEMS 310
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GG+++V E I L I +KT +GRGG++++I M+ + ++G HP
Sbjct: 311 GGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPA 370
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
F+P A+P + I +D+ V Q + G KN PFT IC+SNI + A P
Sbjct: 371 SGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWN 430
Query: 249 CSDVSGSAYQVKPWPCSEL 267
C+++SG + +V P PCS L
Sbjct: 431 CTNISGVSSKVTPKPCSLL 449
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 174/272 (63%), Gaps = 3/272 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++ L +TR LIE M+S +I ISNV NSP WNIHPVY N+VI+ VTILAP SPN
Sbjct: 201 YKSGKLKYTRGYLIELMSSDTIFISNVTLLNSPAWNIHPVYSKNIVIQGVTILAPTRSPN 260
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS S V IED Y+ +GDD VA+KSGWDEYGIA G P+ + +RR+T SP S
Sbjct: 261 TDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEHVIVRRLTCVSPTSAL 320
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A+GSE SGGV +V E + + + +KT +GRG ++++I + + ++ +
Sbjct: 321 VAIGSEMSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYARRMTLTGMKRVFWMT 380
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINLQGV 239
GD HPDD ++ A+PVV G++ +DV T V +++ ++G+ +PF GIC++N+ ++ +
Sbjct: 381 GDYKSHPDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGISGAPFKGICMANVTME-M 439
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
P C+DV G + V P PC +L Q
Sbjct: 440 TKPRKVMWNCADVEGVSTGVTPAPCGQLQQKQ 471
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 167/259 (64%), Gaps = 1/259 (0%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 69
TRP IE + S+++ ISN+ +SP WNIHPVYC+NV+++ VTILAP DSPNTDGI+PDS
Sbjct: 191 TRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDS 250
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETS 128
+N IED Y+ +GDD +AVKSGWD++GI G P+ ++IRR+T SP S GIA+GSE S
Sbjct: 251 CTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMS 310
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GG+++V E I L I +KT +GRGG++++I M+ + ++G HP
Sbjct: 311 GGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPA 370
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
F+P A+PV+ I +D+ V Q + G KN PFT IC+SNI + A P
Sbjct: 371 SGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWN 430
Query: 249 CSDVSGSAYQVKPWPCSEL 267
C+ +SG + +V P PCS L
Sbjct: 431 CTSISGVSSKVTPKPCSLL 449
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 167/260 (64%), Gaps = 1/260 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
TRP IE + S+++ ISN+ +SP WNIHPVYC+NV+++ VTILAP DSPNTDGI+PD
Sbjct: 179 ITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 238
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSET 127
S +N IED Y+ +GDD +AVKSGWD++GI G P+ ++IRR+T SP S GIA+GSE
Sbjct: 239 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 298
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGG+++V E I L I +KT +GRGG++++I M+ + ++G HP
Sbjct: 299 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 358
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 247
F+P A+PV+ I +D+ V Q + G KN PFT IC+SNI + A P
Sbjct: 359 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 418
Query: 248 KCSDVSGSAYQVKPWPCSEL 267
C+ +SG + +V P PCS L
Sbjct: 419 NCTSISGVSSKVTPKPCSLL 438
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/259 (46%), Positives = 167/259 (64%), Gaps = 1/259 (0%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 69
TRP IE + S+++ ISN+ +SP WNIHPVYC+NV+++ VTILAP DSPNTDGI+PDS
Sbjct: 191 TRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDS 250
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETS 128
+N IED Y+ +GDD +AVKSGWD++GI G P+ ++IRR+T SP S GIA+GSE S
Sbjct: 251 CTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMS 310
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GG+++V E I L I +KT +GRGG++++I M+ + ++G HP
Sbjct: 311 GGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPA 370
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
F+P A+PV+ I +D+ V Q + G KN PFT IC+SNI + A P
Sbjct: 371 SGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWN 430
Query: 249 CSDVSGSAYQVKPWPCSEL 267
C+ +SG + +V P PCS L
Sbjct: 431 CTSISGVSSKVTPKPCSLL 449
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 174/270 (64%), Gaps = 4/270 (1%)
Query: 2 WRQ---RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W+Q + L +TRP LIE M S +I ISN+ +SP WNIHPVY SN++I+ +TI+AP
Sbjct: 178 WQQFHNKKLKYTRPYLIELMFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIR 237
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP+
Sbjct: 238 SPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPY 297
Query: 119 SG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
S IA+GSE SGG+++V AE I + GI +KT +GRGG++++I V + M +
Sbjct: 298 SATIALGSEMSGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAF 357
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
I G+ G H D +N +ALP + I +D+ V +G ++G+ N PFTGIC+SN+ +
Sbjct: 358 WITGNYGSHADKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTIT 417
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
A P C+D+ G V P PC L
Sbjct: 418 MAAKAKKQPWTCNDIEGITSGVTPKPCDLL 447
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/277 (44%), Positives = 176/277 (63%), Gaps = 4/277 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++ L +TR LIE M++ + ISNV NSP WNIHPVY N+V+ VTILAP SPN
Sbjct: 176 YKSGKLKYTRGYLIELMHTDGVFISNVTLVNSPAWNIHPVYSRNIVVSGVTILAPVKSPN 235
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS S V IED Y+ +GDD VA+KSGWDEYGIA G PS I++RR+T SP S
Sbjct: 236 TDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISVRRLTCVSPTSAV 295
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ +V AE I + +KT +GRG ++R++ + ++ ++ +
Sbjct: 296 IALGSEMSGGIRDVRAEDITAIGTESAVRIKTAVGRGAYVRDVYARRMRLDGMKRVFWMT 355
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINLQGV 239
GD HPDD ++ A+PVV I+ +DV T V +++ +QG++ +PF GIC++N+ ++ +
Sbjct: 356 GDYKSHPDDGYDKAAVPVVENISYQDVVATGVWKEAARMQGIQGAPFKGICMANVTME-M 414
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
C+DV G + V P PC+ L + GAC
Sbjct: 415 TKERKVSWNCADVEGVSAGVTPAPCAPLQGTHG-GAC 450
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 176/266 (66%), Gaps = 5/266 (1%)
Query: 6 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 65
+L ++RP++IEF++S+ I+ISN+ F N+P NIHPVYCS + IR V I DSP G+
Sbjct: 168 SLNYSRPHIIEFVSSKHILISNLTFLNAPSINIHPVYCSQIHIRKVLIETSVDSPYVLGV 227
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVG 124
PDSS NVCIEDS I+ G D V++KSGWD+YGI YG P++ + IR ++ SP +GI+ G
Sbjct: 228 APDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRNLSLKSPTGAGISFG 287
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 184
SE SGG+ +V E +N+ + VG+ +T GRGG+IRNIT+SDV + + I G G
Sbjct: 288 SEMSGGISDVTVERLNIQSSHVGVAFRTTRGRGGYIRNITISDVDLTSVDTAIVANGHTG 347
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
HPDDKF+ +ALPVV I +++ G + +G + G+ SPFT ICL++I+L S
Sbjct: 348 SHPDDKFDWDALPVVTHIVLRNFTGVDIGLAGNLTGIGESPFTSICLTDIHLH----THS 403
Query: 245 PPLKCSDVSGSAYQVKPWPCSELSSS 270
CS+VSG + V P PC EL SS
Sbjct: 404 DSWICSNVSGFSDDVSPEPCQELMSS 429
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 175/267 (65%), Gaps = 1/267 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L ++RP+L+EF++S I+ISN+ NSP W IHPV+CSNV++ VTI D+P
Sbjct: 169 FRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTIRTSLDAPL 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SG 120
TDGI PDS SN+CIEDS IS D +++KSGWD YGI G P+S I I RV + +
Sbjct: 229 TDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAA 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ ++ +H+N++ GI KT GRGG+IR++ +SDV ME+ IK
Sbjct: 289 LAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFT 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD HPD+ F+P+ALP++N IT+K++ GT + +G++ G+ PFT ICLSNI+
Sbjct: 349 GDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLAD 408
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
S CS++SG + V P PC +L
Sbjct: 409 STQSSSWSCSNISGYSELVFPEPCPDL 435
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/267 (46%), Positives = 175/267 (65%), Gaps = 1/267 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L ++RP+L+EF++S I+ISN+ NSP W IHPV+CSNV++ VTI D+P
Sbjct: 136 FRSNKLNYSRPHLVEFVDSEDIVISNLTLLNSPAWGIHPVFCSNVMVHDVTIRTSLDAPL 195
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SG 120
TDGI PDS SN+CIEDS IS D +++KSGWD YGI G P+S I I RV + +
Sbjct: 196 TDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAA 255
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ ++ +H+N++ GI KT GRGG+IR++ +SDV ME+ IK
Sbjct: 256 LAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFT 315
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD HPD+ F+P+ALP++N IT+K++ GT + +G++ G+ PFT ICLSNI+
Sbjct: 316 GDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLAD 375
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
S CS++SG + V P PC +L
Sbjct: 376 STQSSSWSCSNISGYSELVFPEPCPDL 402
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 173/279 (62%), Gaps = 3/279 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
+Q+ L +TR L+E M S +I+IS+V QNSPFW++HP C+NV I VTILAP D+PNT
Sbjct: 164 KQKRLRYTRGRLVELMWSTNIVISDVTLQNSPFWHLHPYDCTNVTISGVTILAPLDAPNT 223
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GI 121
DGIDPDS NV +E+ YIS GDD VAVKSGWD+YGI Y P +TIR V S S GI
Sbjct: 224 DGIDPDSCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIRNVIARSQISAGI 283
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
++GSE SGGVE VL E + ++ GI +KT+ GRGG+++NI ++ + + R GI +
Sbjct: 284 SIGSEMSGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNLTLIDVRVGIVVKT 343
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D G+HPD F+P ALPVV I+ V+G+ V+ + G K P TGI + N+N+ G+
Sbjct: 344 DYGEHPDLDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITGIDIRNMNV-GLTR 402
Query: 242 PTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
C + G +V P PC L + + +
Sbjct: 403 KKRNVFTCDFLQGRVVGKVFPSPCKALIREEASQTATEE 441
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 124/262 (47%), Positives = 176/262 (67%), Gaps = 1/262 (0%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L +RP+L+EF+ S I+ISN+ F NSP W+IHPVYCSNV + VTI D+P TDGI
Sbjct: 165 LNHSRPHLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNVTIETSLDAPLTDGIV 224
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAVGS 125
PDS SN+CIEDS IS + +++KSGWD+YGI++G P+S I I RV SS + +A GS
Sbjct: 225 PDSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISRVDLLSSSGAALAFGS 284
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
E SGG+ ++ H+ +++ GI KT+ GRGG+I + +S+V MEN GI+ G+
Sbjct: 285 EMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVHVGIEFTGNCST 344
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 245
HPDD F+ + LP ++ +T+K++ GT + +G++ G+ N+PFT ICLSN+N A S
Sbjct: 345 HPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNLNFSMAADTGSS 404
Query: 246 PLKCSDVSGSAYQVKPWPCSEL 267
CS+VSG + V P PC+EL
Sbjct: 405 SWSCSNVSGYSEAVFPEPCTEL 426
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 239 bits (610), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 167/272 (61%), Gaps = 3/272 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L TRP +IE M S I ISN+ +SP W +HP+Y S+++I+ +TILAP DSPN
Sbjct: 179 FHKGELKLTRPYMIEIMFSDHIQISNLTLIDSPSWFVHPIYSSDIIIQGLTILAPVDSPN 238
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS SN IED YI +GDD VA+KSGWDE GI +G PS I IRR+ SP S
Sbjct: 239 TDGINPDSCSNTRIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSPDSAM 298
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ +V AE + N + +KT +GRG ++R+I V + + + +
Sbjct: 299 IALGSEMSGGIRDVRAEELTALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYVFWMT 358
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HP+ F+P ALP + GI +DV V S ++G+ N PFTGIC+SN+ + +
Sbjct: 359 GSYGSHPNTDFDPKALPNITGINYRDVIADNVTYSARLEGIANDPFTGICISNVTIH--S 416
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 272
G P C+D+ G V P PC L ++
Sbjct: 417 GKKKPQWNCTDIEGVTSNVYPKPCELLPLKEK 448
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 167/267 (62%), Gaps = 10/267 (3%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+++ L +TRP LIE M S +I ISN+ NSP WN+HPVY SN++I+ +TI+AP SPN
Sbjct: 180 FKKGKLKYTRPYLIEIMYSDNIQISNLTLLNSPSWNVHPVYSSNILIQGITIIAPVTSPN 239
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PD YI +GDD VAVKSGWDEYGIA+G P+ + IRR+T SP+S
Sbjct: 240 TDGINPDC---------YIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSAT 290
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+++V AE I + G+ +KT +GRGG++++I V + M + +
Sbjct: 291 IALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMT 350
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G H D ++PNALPV+ GI +D+ V + ++G+ PF IC+SN+ + A
Sbjct: 351 GNYGSHADKNYDPNALPVIEGINYRDMVADNVSMAARLEGISGDPFKQICISNVTIGMAA 410
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
P C+D+ G V P PC L
Sbjct: 411 KAKKIPWTCTDIEGITTGVSPRPCDLL 437
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 169/271 (62%), Gaps = 1/271 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++++ L TRP +IE M S I ISN+ NSP W +HP+Y SN++I +TILAP D PN
Sbjct: 181 FQKKQLKITRPYMIEIMYSDQIQISNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPN 240
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDPDS +NV IED+YI +GDD +A+KSG D YGI G PS I +RR+T SP S
Sbjct: 241 TDGIDPDSCTNVLIEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAM 300
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A+GSE SGG++++ E I N + +KT +GRG ++++I V + + + +
Sbjct: 301 VALGSEMSGGIQDIRIEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMT 360
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G H ++ F+P ALP ++GI +D+ V +G + G+ N PFTGIC+SN+ ++ A
Sbjct: 361 GAYKSHAENGFDPKALPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSA 420
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
+ P C+DVSG A P PC L +
Sbjct: 421 QKNNLPWNCTDVSGVASNAVPKPCDMLPEKK 451
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 169/266 (63%), Gaps = 3/266 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R +TL TR +L+EFM S +I++ NV NSPFW +HPVY S+V+I+ VTILAP +PN
Sbjct: 185 FRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKGVTILAPHKAPN 244
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDG+DPDSSSNVCI D+YIS GDD VAVKSGWDEYG+A+ PS + + +T S GI
Sbjct: 245 TDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLVNLTVSGS-HGI 303
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
++GSE SGG+ NV A +++ GIH+KT+ GRG +IRN + + + + G
Sbjct: 304 SLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTG 363
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
GDHPD +N +A + I+ +DV G +V ++G +G+ SPF C +++ L+
Sbjct: 364 IYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALE--LN 421
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSEL 267
S CS + G + V P PC EL
Sbjct: 422 GKSNHWNCSYIEGYSRHVSPPPCPEL 447
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 169/266 (63%), Gaps = 3/266 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R +TL TR +L+EFM S +I++ NV NSPFW +HPVY S+V+I+ VTILAP +PN
Sbjct: 156 FRSKTLQHTRGSLVEFMFSSNILVHNVTLINSPFWTLHPVYTSDVMIKGVTILAPHKAPN 215
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDG+DPDSSSNVCI D+YIS GDD VAVKSGWDEYG+A+ PS + + +T S GI
Sbjct: 216 TDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFLVNLTVSGS-HGI 274
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
++GSE SGG+ NV A +++ GIH+KT+ GRG +IRN + + + + G
Sbjct: 275 SLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTGVAFSFTG 334
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
GDHPD +N +A + I+ +DV G +V ++G +G+ SPF C +++ L+
Sbjct: 335 IYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDVALE--LN 392
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSEL 267
S CS + G + V P PC EL
Sbjct: 393 GKSNHWNCSYIEGYSRHVSPPPCPEL 418
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 123/270 (45%), Positives = 166/270 (61%), Gaps = 3/270 (1%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
TRP +IE M S I ISN+ NSP W +HP+Y SN+ I+ +TILAP DSPNTDGIDPD
Sbjct: 13 LTRPYMIEIMFSDQIQISNLTLVNSPSWFVHPIYSSNITIKGLTILAPVDSPNTDGIDPD 72
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGSET 127
S +N IED YI +GDD VAVKSGWDEYGI +G P+ + IRR+T SP S IA+GSE
Sbjct: 73 SCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISPDSAVIALGSEM 132
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGG--FIRNITVSDVYMENARKGIKIAGDVGD 185
SGG+++V E I + + +KT +GRG ++++I V + + + + G G
Sbjct: 133 SGGIQDVRVEDIIAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLSTMKYVFWMTGSYGS 192
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 245
HPD F+P ALP + GI +DV T V S ++G+ N+PFTGIC+SN+++Q
Sbjct: 193 HPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICISNVSIQVSEQRKKL 252
Query: 246 PLKCSDVSGSAYQVKPWPCSELSSSQQTGA 275
C+DV+G V P C L + G
Sbjct: 253 QWNCTDVAGVTSNVSPNSCQLLPEKGKLGC 282
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/276 (45%), Positives = 177/276 (64%), Gaps = 2/276 (0%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
L +RP+L+EF++S I+ISN+ F NSP W+IHPVYCS V + VTI +D+P T
Sbjct: 170 HSHELNHSRPHLVEFLHSEEIVISNLTFLNSPAWSIHPVYCSKVKVHNVTIKTSSDAPLT 229
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGI 121
DGI PDSSSNV IEDS IS D +++KSGWD+YGI+ G P+S I I R+ +S + +
Sbjct: 230 DGIVPDSSSNVVIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQASSGAAL 289
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A GSE SGG+ ++ A++I ++ GI KT GRGG+I + +SDV M++ I+ G
Sbjct: 290 AFGSEMSGGISDIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVAIEFTG 349
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
+ HPD+ F+P+ LPV+ IT+KD+ GT + +G++ G+ PFT ICLSN+N
Sbjct: 350 NWSSHPDEDFDPSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNFLMAES 409
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSELSS-SQQTGAC 276
S CS+VSG + V P PCSEL + S + C
Sbjct: 410 AHSSSWSCSNVSGYSESVFPEPCSELHTPSSNSSMC 445
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 169/280 (60%), Gaps = 3/280 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+I+N+ ++SPFW IHP C N+ I+ VTILAP +P
Sbjct: 200 YRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGVTILAPVFGAP 259
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDS ++ IED YIS GDD +AVKSGWD+YGI YG PS I IR + S+PF+G
Sbjct: 260 NTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVKSTPFAG 319
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I++GSE SGGV NV E++ +++ G+ +KT GRG ++R IT ++ EN R GI +
Sbjct: 320 ISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVMK 379
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +HPDD ++P ALP++ I+ V G V+ I G + P + ++++ G+
Sbjct: 380 TDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFKDMSV-GLT 438
Query: 241 GPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G + P PC L + G H
Sbjct: 439 YKKKHIFQCAFVQGRVIGTIYPAPCENLDRYNEQGQLVKH 478
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/267 (44%), Positives = 164/267 (61%), Gaps = 2/267 (0%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
++ RP LIE M S + ISN+ NSP W++HP+Y SN+ I+ VTILAP D PNT
Sbjct: 143 EKKLKKLERPYLIEIMYSDQVQISNITLINSPQWHVHPIYSSNLWIQGVTILAPVDVPNT 202
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GI 121
DGI+PDS +NV IED YI +GDD +AVKSG D+YGI G P + IRR+T SP S I
Sbjct: 203 DGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMKQLVIRRITCISPKSAAI 262
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSE SGG+E+V E I N + VKT +GRGG++++I V + ++ + + G
Sbjct: 263 ALGSEMSGGIEDVRIEDITAINTESAVRVKTAVGRGGYVKDIFVRRMTLKTMKYVFWMIG 322
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL-KNSPFTGICLSNINLQGVA 240
H D+ ++P ALP + I +D+ V G ++GL + +PFTGIC+SN+ +
Sbjct: 323 SYSSHADEGYDPKALPEITNINFRDIAADNVTIPGKLEGLGEGNPFTGICISNVTMTLAE 382
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
P C+DVSG + V P PC+ L
Sbjct: 383 KHKEPAWNCTDVSGVSSNVTPMPCAAL 409
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/275 (43%), Positives = 172/275 (62%), Gaps = 4/275 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPN 61
R+R L TRP L++ M S+ I+++N+ +NSPFW+ HP C+NV + VTIL+P + +PN
Sbjct: 204 RRRMLKNTRPPLVQLMWSKDIVVTNITLRNSPFWHFHPYDCTNVTVSNVTILSPISGAPN 263
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDS +V IE+ YIS GDD +A+KSGWD+YGIAYG SS I IR VT S S G
Sbjct: 264 TDGIDPDSCEDVLIENCYISVGDDAIAIKSGWDQYGIAYGRSSSNILIRNVTVRSLVSAG 323
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I++GSE SGGV N+ E++++++ G+ +KT IGRGG+IRNI+ S++ +N R GI I
Sbjct: 324 ISIGSEMSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDNVRAGIVIK 383
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +H DD ++ NA P + GI+ K + G V+ G P I ++++ G++
Sbjct: 384 VDYNEHADDGYDRNAFPDITGISFKKIHGRGVRVPVRAHGSNYIPIKDITFQDMSV-GIS 442
Query: 241 GPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS + G V P PC L + G
Sbjct: 443 YKKKHIFQCSYIEGRVIGSVFPKPCENLDVYDEQG 477
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 172/281 (61%), Gaps = 4/281 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L +TR L++ M S I+I+++ ++SPFW +HP C N+ I+ VTILAP ++P
Sbjct: 271 FRQKRLNYTRGPLLQIMWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAP 330
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS I IR + S S
Sbjct: 331 NTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSA 390
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGG+ NV E++ +++ G+ +KT GRGG++R IT ++ EN R GI +
Sbjct: 391 GISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVM 450
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPDD ++P ALPV+ I+ +V+G V+ I G + P + ++++ G+
Sbjct: 451 KTDYNEHPDDGYDPTALPVIRDISFTNVYGHGVRVPVRIHGSEEIPVRNVTFRDMSV-GL 509
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G + P PC L + G H
Sbjct: 510 TYKKKHIFQCAFVHGRVIGTIFPSPCENLDRYNEQGQLVKH 550
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/275 (44%), Positives = 170/275 (61%), Gaps = 4/275 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPN 61
R+R L TRP L++ M S+ III+N+ +NSPFW++HP C+NV + VTIL+P + +PN
Sbjct: 209 RRRILNNTRPPLVQLMWSKDIIIANITLRNSPFWHLHPYDCTNVTVSNVTILSPVSGAPN 268
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDSS +V IE+ YIS GDD +A+KSGWD+YGIAYG PSS I+IR V S S G
Sbjct: 269 TDGIDPDSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVNARSLVSAG 328
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I++GSE SGGV NV E++ ++ G+ +KT GRGG+IRNI+ ++ +N R GI I
Sbjct: 329 ISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIK 388
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +H DD ++ A P + I+ K + G V+ G P I ++++ G++
Sbjct: 389 VDYNEHADDGYDRTAFPDITSISFKGIHGRGVRVPVRAHGSDVIPIRDISFQDMSV-GIS 447
Query: 241 GPTSPPLKCSDVSGSAYQ-VKPWPCSELSSSQQTG 274
+CS V G + V P PC L + G
Sbjct: 448 YKKKHIFQCSYVEGRVVRPVFPKPCENLDIYDEQG 482
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 168/281 (59%), Gaps = 4/281 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+I+N+ ++SPFW +HP C N+ I+ VTILAP +P
Sbjct: 199 YRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTLHPYDCKNITIKGVTILAPVFGAP 258
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS I IR + S S
Sbjct: 259 NTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSA 318
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV NV+ E+I +++ G+ +KT GRG ++R IT ++ EN R GI +
Sbjct: 319 GISIGSEMSGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNITFENVRVGIVM 378
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPDD ++P ALP++ I+ V G V+ I G + P + ++++ G+
Sbjct: 379 KTDYNEHPDDGYDPMALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFQDMSV-GL 437
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G + P PC L + G H
Sbjct: 438 TYKKKHIFQCAFVQGRVIGTIYPAPCENLDRYNEQGQLVKH 478
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 170/281 (60%), Gaps = 4/281 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M SR I+ISN+ ++SPFW +HP C N+ IR VTILAP D+P
Sbjct: 201 YRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITIRNVTILAPVHDAP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS I IR V S S
Sbjct: 261 NTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSA 320
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV + E++ ++N G+ +KT GRGG++++IT ++ ++ R GI I
Sbjct: 321 GISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVI 380
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ ++P ALPV+ I+ + G V+ + G K+ P + ++++ G+
Sbjct: 381 KTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMSV-GI 439
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G + P PC L + H
Sbjct: 440 TYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDERQRLIKH 480
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/275 (42%), Positives = 167/275 (60%), Gaps = 4/275 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PN 61
R+R L TRP L++ M S+ II++N+ +NSPFW+ HP C+N+ + VTILAP S PN
Sbjct: 171 RRRILNNTRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPN 230
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDS +V IE+ YIS GDD +AVKSGWD+YGIAYG PS I IR V S S G
Sbjct: 231 TDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAG 290
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I++GSE SGG+ NV E + ++ G+ +KT IGRGG+IR+I+ ++ +N R GI I
Sbjct: 291 ISIGSEMSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIK 350
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +H DD ++ +A P + I+ K++ G V+ G + P I ++++ G++
Sbjct: 351 VDYNEHADDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GIS 409
Query: 241 GPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS + G V P PC L + G
Sbjct: 410 YKKKHIFQCSFIEGRVIGSVFPKPCENLDLYNEQG 444
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 167/268 (62%), Gaps = 4/268 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPN 61
R+R L TRP L++ M S II++N+ +NSPFW+ HP C+NV + VTILAP + +PN
Sbjct: 205 RRRMLKNTRPPLVQLMWSSDIIVTNITLRNSPFWHFHPYDCTNVTVSNVTILAPVSGAPN 264
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDS +V IE+ YIS GDD +AVKSGWD+YGIAYG PSS I IR V S S G
Sbjct: 265 TDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSNILIRNVAVRSLVSAG 324
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I++GSE SGGV NV E++ +++ G+ +KT GRGG+IRNI+ ++ +N R GI I
Sbjct: 325 ISIGSEMSGGVANVTVENVRIWDSRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIK 384
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +H DD ++ NA P + GI+ K++ G V+ G P + ++++ G++
Sbjct: 385 VDYNEHADDGYDRNAFPDITGISFKEIHGWGVRVPVRAHGSNIIPIKDVTFQDMSV-GIS 443
Query: 241 GPTSPPLKCSDVSGSAY-QVKPWPCSEL 267
+CS + G V P PC L
Sbjct: 444 YKKKHIFQCSYIEGRVIGSVFPKPCENL 471
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 170/281 (60%), Gaps = 4/281 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M SR I+ISN+ ++SPFW +HP C N+ +R VTILAP D+P
Sbjct: 201 YRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPYDCKNITVRNVTILAPVHDAP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS I IR V S S
Sbjct: 261 NTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQSMVSA 320
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV + E++ ++N G+ +KT GRGG++++IT ++ ++ R GI I
Sbjct: 321 GISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRVGIVI 380
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ ++P ALPV+ I+ + G V+ + G K+ P + ++++ G+
Sbjct: 381 KTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMSV-GI 439
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G + P PC L + H
Sbjct: 440 TYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDERQRLIKH 480
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/269 (45%), Positives = 167/269 (62%), Gaps = 4/269 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSP 60
+R++ L TR L++ M S +IIISN+ Q+SPFW +H C NV I TILAP +P
Sbjct: 240 FRRKLLNHTRGPLVQLMRSSNIIISNITLQDSPFWTLHTYDCKNVTISETTILAPIVGAP 299
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS NV I++ YIS GDD VA+KSGWD+YGIAYG PS+ ITIR VT S S
Sbjct: 300 NTDGIDPDSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRSMVSA 359
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NI ++ +EN R GI I
Sbjct: 360 GVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVI 419
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ FNP A+P+V I+ + G V+ IQG P + ++++ G+
Sbjct: 420 KTDYNEHPDEGFNPKAVPIVGNISYTSIHGQGVRVPVRIQGSAEIPVKNVTFHDMSV-GI 478
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSEL 267
+CS V G V P PC L
Sbjct: 479 LDKKHHVFQCSYVQGQVIGYVFPVPCKNL 507
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/275 (42%), Positives = 169/275 (61%), Gaps = 4/275 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPN 61
R+R L TRP L++ M S+ II++N+ +NSPFW++HP C+NV + VTI++P + +PN
Sbjct: 204 RRRILNNTRPPLVQLMWSKDIIVANITLRNSPFWHLHPYDCTNVTVSNVTIMSPVSGAPN 263
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDS +V IE+ YIS GDD +A+KSGWD+YGIAYG PSS I IR VT S S G
Sbjct: 264 TDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAG 323
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I++GSE SGGV NV E++ ++ G+ +KT GRGG+IRNI+ ++ +N R GI I
Sbjct: 324 ISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIK 383
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +H DD ++ A P + I+ K + G V+ G P I ++++ G++
Sbjct: 384 VDYNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSV-GIS 442
Query: 241 GPTSPPLKCSDVSGSAYQ-VKPWPCSELSSSQQTG 274
+CS + G + V P PC L + G
Sbjct: 443 YKKKHIFQCSYLEGRVIRPVFPKPCENLDVYDEQG 477
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 166/275 (60%), Gaps = 4/275 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PN 61
R+R L TRP L++ M S+ II++N+ +NSPFW+ HP C+N+ + VTILAP S PN
Sbjct: 227 RRRILNNTRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPN 286
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDS +V IE+ YIS GDD +AVKSGWD+YGIAYG PS I IR V S S G
Sbjct: 287 TDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAG 346
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I++GSE SGG+ NV E + ++ G+ +KT IGRGG+I +I+ ++ +N R GI I
Sbjct: 347 ISIGSEMSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIHDISYRNITFDNVRAGIVIK 406
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +H DD ++ +A P + I+ K++ G V+ G + P I ++++ G++
Sbjct: 407 VDYNEHADDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GIS 465
Query: 241 GPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS + G V P PC L + G
Sbjct: 466 YKKKHIFQCSFIEGRVIGSVFPKPCENLDLYNEQG 500
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 170/276 (61%), Gaps = 4/276 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SP 60
+++R L +TR L++ M S I+I+N+ ++SPFW +HP C NV IR VTILAP +P
Sbjct: 214 YQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAP 273
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YISTGDD +A+KSGWD++GIAYG PS+ I IR + S S
Sbjct: 274 NTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISA 333
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+++GSE SGG+ NV E++ ++N GI +KT GRGG+IRNIT ++ ++N R GI I
Sbjct: 334 GVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVI 393
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +H DD ++ A P+++G + + G V+ I G + P + ++++ G+
Sbjct: 394 KTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSV-GL 452
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS V G + + P PC + G
Sbjct: 453 TYKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 488
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 169/275 (61%), Gaps = 4/275 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPN 61
++R L +TR L++ M S I+I+N+ ++SPFW +HP C NV IR VTILAP +PN
Sbjct: 242 QRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPN 301
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDS ++ IED YISTGDD +A+KSGWD++GIAYG PS+ I IR + S S G
Sbjct: 302 TDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAG 361
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+++GSE SGG+ NV E++ ++N GI +KT GRGG+IRNIT ++ ++N R GI I
Sbjct: 362 VSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIK 421
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +H DD ++ A P+++G + + G V+ I G + P + ++++ G+
Sbjct: 422 TDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSV-GLT 480
Query: 241 GPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS V G + + P PC + G
Sbjct: 481 YKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 515
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 169/275 (61%), Gaps = 4/275 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPN 61
++R L +TR L++ M S I+I+N+ ++SPFW +HP C NV IR VTILAP +PN
Sbjct: 215 QRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPN 274
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDS ++ IED YISTGDD +A+KSGWD++GIAYG PS+ I IR + S S G
Sbjct: 275 TDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAG 334
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+++GSE SGG+ NV E++ ++N GI +KT GRGG+IRNIT ++ ++N R GI I
Sbjct: 335 VSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIK 394
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +H DD ++ A P+++G + + G V+ I G + P + ++++ G+
Sbjct: 395 TDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSV-GLT 453
Query: 241 GPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS V G + + P PC + G
Sbjct: 454 YKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 488
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 166/281 (59%), Gaps = 4/281 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+I+N+ ++SPFW IHP C N+ I+ VTILAP +P
Sbjct: 200 YRQKRLNHTRGPLVQIMFSSDIVITNITLRDSPFWTIHPYDCKNITIKGVTILAPVFGAP 259
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YIS GDD +AVKSGWD+YGI YG PS I IR + S S
Sbjct: 260 NTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVVRSMVSA 319
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV NV E++ +++ G+ +KT GRG ++R IT ++ EN R GI +
Sbjct: 320 GISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRVGIVM 379
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPDD ++P ALP++ I+ V G V+ I G + P + ++++ G+
Sbjct: 380 KTDYNEHPDDGYDPLALPILRDISFTTVHGQGVRVPVRIHGSEEIPVRNVTFKDMSV-GL 438
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G + P PC L + G H
Sbjct: 439 TYKKKHIFQCAFVQGRVIGTIYPAPCENLDRYNEQGQLVKH 479
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 169/275 (61%), Gaps = 4/275 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPN 61
++R L +TR L++ M S I+I+N+ ++SPFW +HP C NV IR VTILAP +PN
Sbjct: 215 QRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPN 274
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-G 120
TDGIDPDS ++ IED YISTGDD +A+KSGWD++GIAYG PS+ I IR + S S G
Sbjct: 275 TDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAG 334
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+++GSE SGG+ NV E++ ++N GI +KT GRGG+IRNIT ++ ++N R GI I
Sbjct: 335 VSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRVGIVIK 394
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +H DD ++ A P+++G + + G V+ I G + P + ++++ G+
Sbjct: 395 TDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFRDMSV-GLT 453
Query: 241 GPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS V G + + P PC + G
Sbjct: 454 YKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEG 488
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 169/281 (60%), Gaps = 4/281 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSP 60
+RQ+ L TR L++ + S +I+ISN+ ++SPFW +HP C NV ++ VTILAP + +P
Sbjct: 197 YRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKKVTILAPVSHAP 256
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR-VTGSSPFS 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGI YG PS I IR V S+ +
Sbjct: 257 NTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSA 316
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV NVL E+I ++ + +KT GRGG++R IT ++ ++N R GI I
Sbjct: 317 GISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRVGIVI 376
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HP ++P ALP++ I+ ++ G V+ IQG + P + ++ + G+
Sbjct: 377 KTDYNEHPGAGYDPRALPILRDISFMNIRGQGVRVPVRIQGSEQIPVRNVTFQDMKV-GI 435
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G A + P PC + G H
Sbjct: 436 TYKKKHIFQCAFVQGQAIGTIFPSPCDSFDRYNEQGQLVKH 476
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 163/268 (60%), Gaps = 4/268 (1%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPD 68
TRP L++ M S+ II++N+ +NSPFW+ HP C+N+ + VTILAP S PNTDGIDPD
Sbjct: 1 TRPPLLQLMWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPD 60
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSET 127
S +V IE+ YIS GDD +AVKSGWD+YGIAYG PS I IR V S S GI++GSE
Sbjct: 61 SCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEM 120
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGG+ NV E + ++ G+ +KT IGRGG+IR+I+ ++ +N R GI I D +H
Sbjct: 121 SGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHA 180
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 247
DD ++ +A P + I+ K++ G V+ G + P I ++++ G++
Sbjct: 181 DDGYDRDAFPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIF 239
Query: 248 KCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+CS + G V P PC L + G
Sbjct: 240 QCSFIEGRVIGSVFPKPCENLDLYNEQG 267
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 168/281 (59%), Gaps = 4/281 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSP 60
+RQ+ L TR L++ + S +I+ISN+ ++SPFW +HP C NV ++ VTILAP + +P
Sbjct: 202 YRQKLLNHTRGPLVQILWSSNIVISNITLRDSPFWTLHPYDCKNVTVKNVTILAPVSHAP 261
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR-VTGSSPFS 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGI YG PS I IR V S+ +
Sbjct: 262 NTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRSNVSA 321
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV NVL E+I ++ + +KT GRGG++R IT ++ +N R GI I
Sbjct: 322 GISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRVGIVI 381
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HP ++P ALP++ I+ ++ G V+ IQG + P + ++ + G+
Sbjct: 382 KTDYNEHPGTGYDPRALPILRDISFINIRGQGVRVPVRIQGSEQIPVRNVTFQDMKI-GI 440
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G A + P PC + G H
Sbjct: 441 TYKKKHIFQCAFVQGQAIGTIFPSPCDSFDRYNEQGQLVKH 481
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 168/281 (59%), Gaps = 4/281 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+ISN+ ++SPFW +HP C NV I+ VTILAP ++P
Sbjct: 201 YRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPIFEAP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YG+AYG PS I IR + S S
Sbjct: 261 NTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRSMVSA 320
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+++GSE SGGV NV E++ ++N + +KT+ GRGG++++I ++ +N R GI I
Sbjct: 321 GVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRVGIVI 380
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPDD F+P ALP++ I+ V G V+ I G + P + ++++ G+
Sbjct: 381 KTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEEIPVKKVTFRDMSV-GI 439
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G V P PC L + H
Sbjct: 440 TYKKKHIFQCAYVEGRVIGTVFPAPCENLDRYDEQEQLIKH 480
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 166/269 (61%), Gaps = 4/269 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSP 60
+R++ L TR L++ M S +IIISN+ ++SPFW +H C NV I TILAP +P
Sbjct: 238 FRKKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHVYDCKNVTISGTTILAPIVGAP 297
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS NV IE+ YIS GDD VA+KSGWD+YGIAYG PS+ ITIR V S S
Sbjct: 298 NTDGIDPDSCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIRSMVSA 357
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NI ++ +EN R GI I
Sbjct: 358 GVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRVGIVI 417
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ F+P A+PV I+ + G +V+ IQG P + ++++ G+
Sbjct: 418 KTDYNEHPDELFDPKAVPVGGNISYTSIHGQRVRVPVRIQGSAEIPVRNVTFHDMSV-GI 476
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSEL 267
+CS V G V P PC L
Sbjct: 477 LDKKHHVFQCSFVQGQVIGYVFPVPCKNL 505
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 169/271 (62%), Gaps = 4/271 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF++S ++I+SN+ F N+P + IH VYCSN+ I VT +SP
Sbjct: 167 FNSHSLEYSRPHLVEFVSSGNVIVSNLTFLNAPAYTIHSVYCSNLYIHRVTANTSPESPY 226
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T GI PDSS NVCI+DS I+ G D +++KSGWDEYGI+Y P++ + I+ V G++ S
Sbjct: 227 TIGIVPDSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKNVYLGAASGSS 286
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I+ GSE SGG+ +V +++N GI +T GRGG+I+ I +S+++M N
Sbjct: 287 ISFGSEMSGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHMVNVGTAFLAN 346
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD F+ NA P+V+ I + D+ G + +G G + SPFT I LSNI+L +
Sbjct: 347 GSFGTHPDSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSILLSNISLS-IK 405
Query: 241 GPTSPP--LKCSDVSGSAYQVKPWPCSELSS 269
SP +CS V GS+ V P PC EL S
Sbjct: 406 NSDSPADFWQCSYVDGSSEFVVPEPCLELKS 436
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 161/276 (58%), Gaps = 4/276 (1%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSPNT 62
+ L +TR L++ M S I+ISN+ ++SPFW +HP C NV I+ VTILAP +PNT
Sbjct: 184 HKLLNYTRGPLVQIMYSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAPNT 243
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GI 121
DGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAY PS I IR + S S GI
Sbjct: 244 DGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVRSNVSAGI 303
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
++GSE SGGV NV E+I ++ I +KT GRGG++R IT ++ N R GI I
Sbjct: 304 SIGSEMSGGVSNVTIENILVWESRRAIRIKTAPGRGGYVRQITYRNITFHNVRVGIVIKT 363
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D +HPDD ++P ALP++ I+ ++ G V+ I G + P + ++N+ G+
Sbjct: 364 DYNEHPDDGYDPTALPILRDISFTNIRGEGVRVPVRITGSEEIPVRNVTFHDMNV-GITY 422
Query: 242 PTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGAC 276
+C+ V G + P PC + G
Sbjct: 423 KKKHIFQCAFVEGRVIGTIFPKPCRNFDQYNEQGEL 458
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 166/269 (61%), Gaps = 4/269 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSP 60
+R++ L TR L++ M S +IIISN+ ++SPFW +H C NV I TILAP A +P
Sbjct: 224 FRRKLLNHTRGPLVQLMRSSNIIISNITLRDSPFWTLHTYDCKNVTISETTILAPIAGAP 283
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ ITI+ V S S
Sbjct: 284 NTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIRSMVSA 343
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+++GSE SGGV +VL E++++++ G+ +KT GRG ++ N+ ++ EN R GI I
Sbjct: 344 GVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVRVGIVI 403
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ F+P A+P + I+ + G +V+ IQG P + ++++ G+
Sbjct: 404 KTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAQIPVKNVTFHDMSI-GI 462
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSEL 267
+CS V G V P PC L
Sbjct: 463 VDKKHHVFQCSFVQGQVIGYVFPVPCKNL 491
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 165/269 (61%), Gaps = 4/269 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSP 60
+R++ L TR L++ M S IIISN+ ++SPFW +H C NV I TILAP A +P
Sbjct: 226 FRRKLLNHTRGPLVQLMRSSDIIISNITLRDSPFWTLHTYDCKNVTISETTILAPIAGAP 285
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ I I+ V S S
Sbjct: 286 NTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIRSMVSA 345
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+++GSE SGGV +VL E++++++ G+ +KT GRG ++ NI ++ +EN R GI I
Sbjct: 346 GVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRVGIVI 405
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ F+P A+P + I+ + G +V+ IQG P + ++++ G+
Sbjct: 406 KTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQGSAEIPVKNVTFHDMSI-GI 464
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSEL 267
+CS V G V P PC L
Sbjct: 465 VDKKHHVFQCSFVQGQVIGYVFPVPCKNL 493
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 168/276 (60%), Gaps = 4/276 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+ +N+ ++SPFW +HP C NV IR VTILAP ++P
Sbjct: 203 YRQKLLNHTRGPLVQIMWSSDIVFTNITLRDSPFWTLHPYDCKNVTIRNVTILAPIFEAP 262
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS+ I IR + S S
Sbjct: 263 NTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSA 322
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV NV E++ +++ + +KT GRGG++R+IT ++ +N R GI I
Sbjct: 323 GISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVI 382
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ ++P A+P++ I+ + G V+ I G + P + ++++ G+
Sbjct: 383 KTDYNEHPDEGYDPKAVPILGDISFTGIHGQGVRVPVRIHGSQEIPVRNVTFWDMSV-GL 441
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+C+ V G V P PC L + G
Sbjct: 442 TYKKKHIFQCAFVQGRVIGTVFPAPCENLDRYDEQG 477
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 168/276 (60%), Gaps = 4/276 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+I+N+ ++SPFW +HP C NV IR VTILAP ++P
Sbjct: 202 YRQKLLNHTRGPLVQIMWSSDILITNITLRDSPFWTLHPYDCKNVTIRNVTILAPVLEAP 261
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAY PS+ I IR + S S
Sbjct: 262 NTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNILIRNLVVRSMVSA 321
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV N+ E++ +++ + +KT GRGG++R+IT ++ +N R GI I
Sbjct: 322 GISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRVGIVI 381
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ ++P A+PV+ I+ V G V+ I G + P + ++++ G+
Sbjct: 382 KTDYNEHPDEGYDPKAVPVLRDISFTGVHGQGVRVPVRIHGSEEIPVRNVTFQDMSV-GL 440
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+C+ V G + P PC L + G
Sbjct: 441 TYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQG 476
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 164/274 (59%), Gaps = 4/274 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+ +N+ ++SPFW +HP C NV I +TILAP ++P
Sbjct: 195 YRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAP 254
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IE+SYIS GDD +A+KSGWD+YG YG PS I IR + S S
Sbjct: 255 NTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIRSMVSA 314
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV N+ E+I +++ G+ +KT GRGG++R+IT +V ++ R GI I
Sbjct: 315 GISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVI 374
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD FNP A P++ I ++G V+ IQG K P + ++++ G+
Sbjct: 375 KTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMSV-GI 433
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 272
+C+ V G + P PC L +
Sbjct: 434 TYKKKHIFQCAYVEGRVIGTIFPAPCENLDRYDE 467
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 164/274 (59%), Gaps = 4/274 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+ +N+ ++SPFW +HP C NV I +TILAP ++P
Sbjct: 192 YRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAP 251
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IE+SYIS GDD +A+KSGWD+YG YG PS I IR + S S
Sbjct: 252 NTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSA 311
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV N+ E+I +++ G+ +KT GRGG++R+IT +V ++ R GI I
Sbjct: 312 GISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVI 371
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD FNP A P++ I ++G V+ IQG K P + ++++ G+
Sbjct: 372 KTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMSV-GI 430
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 272
+C+ V G + P PC L +
Sbjct: 431 TYKKKHIFQCAYVEGRVIGTIFPAPCDNLDRYDE 464
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 165/276 (59%), Gaps = 4/276 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+ N+ +NSPFW +HP C NV IR VTILAP ++P
Sbjct: 203 YRQKLLNHTRGPLVQIMWSSDIVFMNITLRNSPFWTLHPYDCKNVTIRNVTILAPIFEAP 262
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS+ I IR + S S
Sbjct: 263 NTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRSMVSA 322
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV +V E++ +++ + +KT GRG ++RNIT ++ ++ R GI I
Sbjct: 323 GISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLTFDDVRVGIVI 382
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ ++P A+P + I+ + G V+ I G + P + ++++ G+
Sbjct: 383 KTDYNEHPDEGYDPKAVPTLQDISFSGIHGQGVRVPVRIHGSEEIPVRNVTFQDMSV-GL 441
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTG 274
+C+ V G + P PC L + G
Sbjct: 442 TYKKKHIFQCAFVQGRVIGTIFPAPCENLDRYDEQG 477
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 163/274 (59%), Gaps = 4/274 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L + M S I+ +N+ ++SPFW +HP C NV I +TILAP ++P
Sbjct: 192 YRQKLLNHTRGPLAQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAP 251
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS ++ IE+SYIS GDD +A+KSGWD+YG YG PS I IR + S S
Sbjct: 252 NTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSA 311
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV N+ E+I +++ G+ +KT GRGG++R+IT +V ++ R GI I
Sbjct: 312 GISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRVGIVI 371
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD FNP A P++ I ++G V+ IQG K P + ++++ G+
Sbjct: 372 KTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMSV-GI 430
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQ 272
+C+ V G + P PC L +
Sbjct: 431 TYKKKHIFQCAYVEGRVIGTIFPAPCDNLDRYDE 464
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 165/281 (58%), Gaps = 4/281 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+R++ L TR L++ M S I+I+N+ ++SPFW +HP C NV I+ VTILAP +P
Sbjct: 190 YREKLLNHTRGPLVQIMWSSDIVIANITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAP 249
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR-VTGSSPFS 119
NTDGIDPDS ++ IED YIS GDD +A+KSGWD+YGIAYG PS I IR V S+ +
Sbjct: 250 NTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIRNLVVRSNVSA 309
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GI++GSE SGGV NV E++ ++ I +KT GRGG++R IT ++ N R GI I
Sbjct: 310 GISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLTFNNVRVGIVI 369
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ +HPD ++P A PV++ I+ +V G V+ I+G K + ++N+ G+
Sbjct: 370 KTNYNEHPDAGYDPLAFPVLSDISFINVRGQGVRVPVRIEGSKEISVRNVTFQDMNV-GI 428
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
+C+ V G + P PC + G H
Sbjct: 429 TYKKKHIFQCAFVEGRVIGTIFPAPCGNFDQYNEQGELVKH 469
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 166/269 (61%), Gaps = 4/269 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSP 60
+R++ L TR L++ M S +I ISN+ ++SPFW +H C +V I TILAP +P
Sbjct: 134 FRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPIVGAP 193
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ I I VT S S
Sbjct: 194 NTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSA 253
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NIT ++ +E+ R GI I
Sbjct: 254 GVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVI 313
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ F+P A+P++ I+ + G V+ IQG P + ++++ G+
Sbjct: 314 KTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMSV-GL 372
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSEL 267
+ +CS V G V P PC L
Sbjct: 373 VDRKNHVFQCSFVQGQVIGYVFPVPCKNL 401
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 166/269 (61%), Gaps = 4/269 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSP 60
+R++ L TR L++ M S +I ISN+ ++SPFW +H C +V I TILAP +P
Sbjct: 234 FRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPIVGAP 293
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ I I VT S S
Sbjct: 294 NTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSA 353
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NIT ++ +E+ R GI I
Sbjct: 354 GVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVI 413
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ F+P A+P++ I+ + G V+ IQG P + ++++ G+
Sbjct: 414 KTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMSV-GL 472
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSEL 267
+ +CS V G V P PC L
Sbjct: 473 VDRKNHVFQCSFVQGQVIGYVFPVPCKNL 501
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 166/269 (61%), Gaps = 4/269 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSP 60
+R++ L TR L++ M S +I ISN+ ++SPFW +H C +V I TILAP +P
Sbjct: 234 FRKKVLNHTRGPLVQLMRSSNITISNITLRDSPFWTLHIYDCKDVTISDTTILAPIVGAP 293
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS- 119
NTDGIDPDS NV I++ YIS GDD +A+KSGWD+YGIAYG PS+ I I VT S S
Sbjct: 294 NTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRSMVSA 353
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+++GSE SGGV NVL E++++++ G+ +KT GRG ++ NIT ++ +E+ R GI I
Sbjct: 354 GVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRVGIVI 413
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D +HPD+ F+P A+P++ I+ + G V+ IQG P + ++++ G+
Sbjct: 414 KTDYNEHPDEGFDPKAVPIIENISYSSIHGHGVRVPVRIQGSAEIPVKNVTFHDMSV-GL 472
Query: 240 AGPTSPPLKCSDVSGSAY-QVKPWPCSEL 267
+ +CS V G V P PC L
Sbjct: 473 VDRRNHVFQCSFVQGQVIGYVFPVPCRNL 501
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 157/260 (60%), Gaps = 4/260 (1%)
Query: 18 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDPDSSSNVCIE 76
M S+ II++N+ +NSPFW+ HP C+N+ + VTILAP S PNTDGIDPDS +V IE
Sbjct: 1 MWSKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIE 60
Query: 77 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVL 135
+ YIS GDD +AVKSGWD+YGIAYG PS I IR V S S GI++GSE SGG+ NV
Sbjct: 61 NCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVT 120
Query: 136 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 195
E + ++ G+ +KT IGRGG+IR+I+ ++ +N R GI I D +H DD ++ +A
Sbjct: 121 VEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDA 180
Query: 196 LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGS 255
P + I+ K++ G V+ G + P I ++++ G++ +CS + G
Sbjct: 181 FPDITNISFKEIHGRGVRVPVRAHGSSDIPIKDISFQDMSI-GISYKKKHIFQCSFIEGR 239
Query: 256 AY-QVKPWPCSELSSSQQTG 274
V P PC L + G
Sbjct: 240 VIGSVFPKPCENLDLYNEQG 259
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 172/268 (64%), Gaps = 4/268 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L + RP+LIEF++S+++I+SN+ F N+P + IH +Y S+V I + + +SP
Sbjct: 169 FTSHSLKYNRPHLIEFLSSKNVIVSNLTFLNAPAYTIHSIYSSHVYIHKILAHSSPESPY 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV--TGSSPFS 119
T GI PDSS+ VCI++S I+ G D +++KSGWDEYGIAY P+ + IR V G+S S
Sbjct: 229 TIGIVPDSSNYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASG-S 287
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
I+ GSE SGG+ +V+ ++ +++N GI +T GRGG+I+ I +S++ M I
Sbjct: 288 SISFGSEMSGGISDVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDISNIDMSRIGTAIVA 347
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G G HPDDK++ NALP+V+ I + ++ G + +G + G+K SPF+ + LSNI L
Sbjct: 348 NGSFGSHPDDKYDANALPLVSHIRLSNISGENIGIAGKLFGIKESPFSAVALSNIALS-T 406
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
+ +S +CS V GS+ V P PC EL
Sbjct: 407 SSGSSVSWQCSYVYGSSESVIPEPCPEL 434
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 166/271 (61%), Gaps = 4/271 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF+++ ++I+SN+ F N+P + IH VYC N+ I VT +SP
Sbjct: 167 FNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCPESPY 226
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T GI PDSS NVCI++S I+ G D +++KSG DEYG++Y P++ + IR V ++ S
Sbjct: 227 TIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSS 286
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I+ GSE SGG+ +V +++N GI +T GRGG+I+ I +S+++M N
Sbjct: 287 ISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLAN 346
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD F+ NA P+V+ I + D+ G + +G G K SPFT I LSNI+L +
Sbjct: 347 GSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLS-IK 405
Query: 241 GPTSPP--LKCSDVSGSAYQVKPWPCSELSS 269
SP +CS V GS+ V P PC EL S
Sbjct: 406 NSASPADSWQCSYVDGSSEFVVPEPCLELKS 436
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 166/271 (61%), Gaps = 4/271 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L ++RP+L+EF+++ ++I+SN+ F N+P + IH VYC N+ I VT +SP
Sbjct: 169 FNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCPESPY 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSG 120
T GI PDSS NVCI++S I+ G D +++KSG DEYG++Y P++ + IR V ++ S
Sbjct: 229 TIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAASGSS 288
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
I+ GSE SGG+ +V +++N GI +T GRGG+I+ I +S+++M N
Sbjct: 289 ISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTAFLAN 348
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G G HPD F+ NA P+V+ I + D+ G + +G G K SPFT I LSNI+L +
Sbjct: 349 GSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLS-IK 407
Query: 241 GPTSPP--LKCSDVSGSAYQVKPWPCSELSS 269
SP +CS V GS+ V P PC EL S
Sbjct: 408 NSASPADSWQCSYVDGSSEFVVPEPCLELKS 438
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 168/297 (56%), Gaps = 20/297 (6%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP 60
+RQ+ L TR L++ M S I+ISN+ ++SPFW +HP C NV I+ VTILAP ++P
Sbjct: 201 YRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPIFEAP 260
Query: 61 NTDGIDP----------------DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPS 104
NTDGIDP +S ++ IED YIS GDD +A+KSGWD+YG+AYG PS
Sbjct: 261 NTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPS 320
Query: 105 SGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI 163
I IR + S S G+++GSE SGGV NV E++ ++N + +KT+ GRGG++++I
Sbjct: 321 VNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHI 380
Query: 164 TVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
++ +N R GI I D +HPDD F+P ALP++ I+ V G V+ I G +
Sbjct: 381 NYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHGQGVRVPVRIHGSEE 440
Query: 224 SPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSELSSSQQTGACSNH 279
P + ++++ G+ +C+ V G V P PC L + H
Sbjct: 441 IPVKKVTFRDMSV-GITYKKKHIFQCAYVEGRVIGTVFPAPCENLDRYDEQEQLXKH 496
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 160/267 (59%), Gaps = 4/267 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R L +TR +L+E M + I++ NV +NSPFW IHP +NV++ VTI P DSPNT
Sbjct: 183 RASNLTYTRGHLVELMYTTDIMLVNVELRNSPFWTIHPYSSTNVLVSNVTINNPLDSPNT 242
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GI 121
DG DPDS + V I++ + GDD +AVKSGWD GI YG P++ + IR +T +P S I
Sbjct: 243 DGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTTDVVIRNMTMHTPTSAAI 302
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSE SGGV N+LA+ I +N GI +K+ GRGG++RN+T V + + + + I
Sbjct: 303 AIGSEMSGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLTFDGVTLNDVKTALSIND 362
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
G H ++P A+P+++ I + ++ GT + G QGL ++ T + +SN++L V
Sbjct: 363 FYGQHESIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLFDAKITNVAISNVSLAVVG- 421
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSELS 268
S CS +G+ + V P C +
Sbjct: 422 --SGSYTCSYATGTQHAVVPVLCDAFA 446
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 132/202 (65%), Gaps = 10/202 (4%)
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSGIAVGSE 126
DSS + CIED I+ G D +A+KSGWDEYGIAYG P++ + IRRV SS S +A GSE
Sbjct: 51 DSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSE 110
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
SGG+ NV E ++LYN GI +T GRGG+I+ I +SDV MEN G +G H
Sbjct: 111 MSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSH 170
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP 246
PDD F+PNALPV++ IT+++V GT + +G G++ SPFT ICLSNI+L T+PP
Sbjct: 171 PDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLS-----TTPP 225
Query: 247 LK----CSDVSGSAYQVKPWPC 264
CS+VSG + V P PC
Sbjct: 226 ASISWVCSNVSGFSQWVFPEPC 247
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 171/268 (63%), Gaps = 4/268 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L + RP+LIEF++S ++I+SN+ F N+P ++I+ +Y S+V I + + SP
Sbjct: 169 FTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPY 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV--TGSSPFS 119
T GI PDSS VCI++S I+ G D +++KSGWDEYGIAY P+ + IR V G+S S
Sbjct: 229 TIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASG-S 287
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
I+ GSE SGG+ +V+ ++ +++ GI +T GRGG+I+ I +S++ M I
Sbjct: 288 SISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVA 347
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G G HPDDK++ NALP+V+ I + ++ G + +G + G+K SPF+ + LSN++L +
Sbjct: 348 NGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLS-M 406
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
+ +S +CS V GS+ V P PC EL
Sbjct: 407 SSGSSVSWQCSYVYGSSESVIPEPCPEL 434
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 171/268 (63%), Gaps = 4/268 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L + RP+LIEF++S ++I+SN+ F N+P ++I+ +Y S+V I + + SP
Sbjct: 100 FTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPY 159
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV--TGSSPFS 119
T GI PDSS VCI++S I+ G D +++KSGWDEYGIAY P+ + IR V G+S S
Sbjct: 160 TIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASG-S 218
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
I+ GSE SGG+ +V+ ++ +++ GI +T GRGG+I+ I +S++ M I
Sbjct: 219 SISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVA 278
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G G HPDDK++ NALP+V+ I + ++ G + +G + G+K SPF+ + LSN++L +
Sbjct: 279 NGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLS-M 337
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
+ +S +CS V GS+ V P PC EL
Sbjct: 338 SSGSSVSWQCSYVYGSSESVIPEPCPEL 365
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 171/268 (63%), Gaps = 4/268 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +L + RP+LIEF++S ++I+SN+ F N+P ++I+ +Y S+V I + + SP
Sbjct: 100 FTSHSLKYNRPHLIEFLSSENVIVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSPKSPY 159
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV--TGSSPFS 119
T GI PDSS VCI++S I+ G D +++KSGWDEYGIAY P+ + IR V G+S S
Sbjct: 160 TIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGASG-S 218
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
I+ GSE SGG+ +V+ ++ +++ GI +T GRGG+I+ I +S++ M I
Sbjct: 219 SISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTAIVA 278
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G G HPDDK++ NALP+V+ I + ++ G + +G + G+K SPF+ + LSN++L +
Sbjct: 279 NGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSLS-M 337
Query: 240 AGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
+ +S +CS V GS+ V P PC EL
Sbjct: 338 SSGSSVSWQCSYVYGSSESVIPEPCPEL 365
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +NV IED YI +GDD VAVKSGWDEYGIA+G P+ + IRR+T SP+S
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+ +V AE I N GI +KT +GRG +I++I V + M + K+
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD HPD+K++PNALPV+ I +D+ V + G+ FTGIC++N+ L A
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 276
P C+DV G V P PC L ++ AC
Sbjct: 181 KHKKYPWTCTDVQGMTSGVTPPPCDSLPDQGPEKISAC 218
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 158/276 (57%), Gaps = 6/276 (2%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ ++ L TRPNLIE + S + I+ + +SP WN+HP+Y NV+I+ +TI+AP PN
Sbjct: 164 FHEKRLNATRPNLIEIVFSYQVQITXTLI-DSPSWNVHPIYSRNVIIQGLTIIAPVTVPN 222
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS +N+ +ED YI +GDD +AVKS +E G+ G P+ G+ IRR+T SP S
Sbjct: 223 TDGINPDSCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRRLTCISPHSAV 282
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+G E +G + NV AE I + GI +KT + RGG++++I V + M+ R I
Sbjct: 283 IALGREMAGXM-NVRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTMKTMRFAFWII 341
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G P + PV+ GI +D+ V + G+ PFTG C+SN+ +
Sbjct: 342 GDYGPPPAPG---HEGPVIEGINYRDMVADNVTYPAQLHGISGGPFTGFCISNVTIGLTE 398
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
C +V G +V P PC LS S++ C
Sbjct: 399 ESRKQQWDCDEVQGITSRVTPQPCDLLSPSKEILNC 434
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 144/262 (54%), Gaps = 48/262 (18%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L +TRP LIE M+S ++ IS++ NSP WN+HPVY SNV+I+ +TI AP SPNTDGI+
Sbjct: 184 LKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVTSPNTDGIN 243
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-IAVGS 125
PDS +N IED YI +GDD +AVKSGWDEYGIAYG P+ + IRR+T SPFS IA+GS
Sbjct: 244 PDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSATIALGS 303
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
E SGG+E+V AE I + G+ +KT I D+ EN
Sbjct: 304 EMSGGIEDVRAEDILAIDTESGVRIKT--------AGINYRDMVAEN------------- 342
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 245
V +G ++G+ PFTGIC+SN+ +
Sbjct: 343 --------------------------VTMAGRLEGISGDPFTGICISNVTIGLAKKAKKA 376
Query: 246 PLKCSDVSGSAYQVKPWPCSEL 267
P C+D++G V P PC L
Sbjct: 377 PWTCTDIAGITSGVVPQPCDLL 398
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 1/213 (0%)
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDG+DPDS +N IED +I +GDD VAVKSGWDEYGI+YG P+ + IRR+T SP+S
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
IA+GSE SGG+E+V AE I N GI +KT +GRGG++++I V + M + +
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+ G HPD ++P A P++ GI +D+ V ++G+ +PFTGIC+SN +
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAP 180
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 273
P CSD+ G V P PC L + T
Sbjct: 181 ESKKEPWTCSDIHGITSGVTPQPCGMLPAETTT 213
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 131/206 (63%), Gaps = 1/206 (0%)
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG-I 121
DGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR+T SP S I
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
A+GSE SGG+E+V AE I N G+ +KT IGRGG++++I V + M + + G
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
+ G H D+ ++PNALP++ I +D+ V + ++G+ PFTGIC+SN+ +
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQK 180
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSEL 267
P C+D+SG + V P PC+ L
Sbjct: 181 PKKLQWNCTDISGISSSVVPQPCNAL 206
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 3/201 (1%)
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSE 126
DSS+NVCIED YI +GDDLVAVKSGWD+YG+A PSS I IRR++G++ SG+ +GSE
Sbjct: 251 DSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSE 310
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
SGG+ N+ E I++++ G+ +KT+ GRGG+I NIT ++V +E + I+ + DH
Sbjct: 311 MSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDH 370
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP 246
DDK++P ALP V GI I +V +++ ++ G++ + F +CL N+ L G+ P +
Sbjct: 371 SDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGL--PKTEK 428
Query: 247 LKCSDVSGSAYQVKPWPCSEL 267
KC DVSG A V P C +L
Sbjct: 429 WKCKDVSGYASDVFPLSCPQL 449
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 139/212 (65%), Gaps = 5/212 (2%)
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGS 125
PDSS+NVCI Y+ G D++ +KSGWDEYGI++ PSS I+I +TG + SGIA GS
Sbjct: 10 PDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGS 69
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
E SGG+ V A + + N GI +KT GRGG++ N+ ++DV M+N I+I G+ G+
Sbjct: 70 EMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGE 129
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 245
HPDDK++ ALPV++ ITIKDV G + +G+++G++ F+ ICLSN++L + ++
Sbjct: 130 HPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSL---SVQSAH 186
Query: 246 PLKCSDVSGSAYQVKPWPCSELSSS-QQTGAC 276
P CS + G + V P C +L S+ +QT C
Sbjct: 187 PWNCSLIEGYSNSVIPESCEQLRSNCRQTSIC 218
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 140/270 (51%), Gaps = 52/270 (19%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++++ TRP LIE + S++I ISN+ +SP WNIHPVYC++V+++ VT+LAP PN
Sbjct: 172 FKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPN 231
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGI+PDS +N IED YI +GDD +AVKSGWD+YGI
Sbjct: 232 TDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIK---------------------T 270
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
AVG RG ++++I + M+ + ++G
Sbjct: 271 AVG-------------------------------RGAYVKDIYARRITMKTMKYVFWMSG 299
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
+ G HPD+ F+P ALP + I +D+ V S + G+ PFTGIC+SN+ + A
Sbjct: 300 NYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAK 359
Query: 242 PTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
C+DV+G +V P PCS L +
Sbjct: 360 AKKMQWNCTDVAGVTSRVTPEPCSLLPEKK 389
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 152/262 (58%), Gaps = 8/262 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+TR +L E M SR + +S++ +SPFW +HPVY + +TIL P SPNTDG+DPD
Sbjct: 204 YTRGHLYEVMWSRQLEVSHLTLTHSPFWTVHPVYSQDFRAIDLTILNPPYSPNTDGVDPD 263
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP-FSGIAVGSET 127
S+ +V I D Y STGDD VA+KSGWD YG S+ ITI SP +GI +GSE
Sbjct: 264 STRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNNITIENCVFHSPNAAGICLGSEM 323
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA-RKGIKIAGDVGDH 186
SGG+ NV A +I + G +KT +GRGG++ N+TV DV +EN+ + + G G H
Sbjct: 324 SGGIANVFARNITMTGCLQGFRIKTGMGRGGYVVNVTVEDVVIENSIQLAVGYNGHYGGH 383
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPP 246
P +NP A P V I++ + G Q + GL NS F + N+++ G G T
Sbjct: 384 P-AGYNPLATPHVYNISLINARGGNNTQIAELVGLPNSQFRALRFQNVHITGKQGWT--- 439
Query: 247 LKCSDVSGSAYQVKPWPCSELS 268
CSD+SG+A V P C L+
Sbjct: 440 --CSDISGTAQNVTPAACPSLA 459
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 109/138 (78%)
Query: 76 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 135
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSETSGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSETSGGIRDIL 60
Query: 136 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 195
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 196 LPVVNGITIKDVWGTKVQ 213
LPVV I + DV G+ ++
Sbjct: 121 LPVVGDIAVLDVVGSSIK 138
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 109/138 (78%)
Query: 76 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 135
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSETSGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSETSGGIRDIL 60
Query: 136 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 195
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 196 LPVVNGITIKDVWGTKVQ 213
LPVV I + +V G+ ++
Sbjct: 121 LPVVGDIAVLNVVGSSIK 138
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 109/138 (78%)
Query: 76 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 135
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSETSGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSETSGGIRDIL 60
Query: 136 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 195
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 196 LPVVNGITIKDVWGTKVQ 213
LPVV I + +V G+ ++
Sbjct: 121 LPVVGDIAVLNVVGSSIK 138
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R + TRP LIE M S + ISN+ +SP WN+HPVY NV+++ +TILAP DSPN
Sbjct: 178 FRAKKYNDTRPYLIEIMYSNHVQISNLTLIDSPSWNVHPVYSRNVLVKDLTILAPIDSPN 237
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGI+PDS V IED +I +GDD +AVKSGWD+YG +G P+ + IRR+T SP S
Sbjct: 238 TDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISPDSAT 297
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFI 160
IA+GSE SGG++NV AE I + GI +KT IGRGG+I
Sbjct: 298 IALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYI 337
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 137/260 (52%), Gaps = 38/260 (14%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD- 68
+RP LI+ M + + ISN+ NSP W++HPVYCSNV+++ VTI+AP + PNTDGI+P
Sbjct: 192 SRPLLIDIMYTDQLQISNITLVNSPSWHVHPVYCSNVLVQGVTIIAPVEVPNTDGINPSR 251
Query: 69 ---SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
SS + + IST D +GIA+GS
Sbjct: 252 FLASSFHQYLNFPLISTSD----------------------------------AGIALGS 277
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
E SGG+ENV E I + + +KT GRGG++++I V + ++ + I+G+
Sbjct: 278 EMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTLQTMKYVFWISGNYKT 337
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP 245
HPDD F+PNAL + I +D+ V SG G + FTGIC+SN+ +Q P P
Sbjct: 338 HPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGICMSNVTIQLSQTPKKP 397
Query: 246 PLKCSDVSGSAYQVKPWPCS 265
CS+V G + V P PCS
Sbjct: 398 QWNCSNVEGVSSHVTPTPCS 417
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 108/138 (78%)
Query: 76 EDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 135
ED Y+S GDD +A+KSGWDEYGI++ PSS I +RR+T S+PFSGIA+GSE SGG+ ++L
Sbjct: 1 EDCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTPFSGIAIGSEMSGGIRDIL 60
Query: 136 AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNA 195
E+I++Y+ VGI VKTN+GRGG IRNIT S +Y++N GIK +G+ GDHPD ++NP A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 196 LPVVNGITIKDVWGTKVQ 213
LPVV I + +V G+ ++
Sbjct: 121 LPVVGDIAVLNVVGSSIK 138
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 131/207 (63%), Gaps = 1/207 (0%)
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SG 120
TD + DS SN+CIEDS IS D +++KSGWD YGI G P+S I I RV + +
Sbjct: 137 TDVVITDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAA 196
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+A GSE SGG+ ++ +H+N++ GI KT GRGG+IR++ +SDV ME+ IK
Sbjct: 197 LAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFT 256
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD HPD+ F+P+ALP++N IT+K++ GT + +G++ G+ PFT ICLSNI+
Sbjct: 257 GDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISFSLAD 316
Query: 241 GPTSPPLKCSDVSGSAYQVKPWPCSEL 267
S CS++SG + V P PC +L
Sbjct: 317 STQSSSWSCSNISGYSELVFPEPCPDL 343
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 147/283 (51%), Gaps = 33/283 (11%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+TR +L+EFM S I + N+ QNSPFW H C +V ++ V + AP SPNTDG DPD
Sbjct: 151 YTRGHLVEFMYSSRIRMYNLRLQNSPFWTNHFYDCDDVHVQNVHVKAPWSSPNTDGWDPD 210
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS NV IEDS GDD VA+KSGWD +GI Y PS ITIR VT P++GIA+G+E S
Sbjct: 211 SSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQGPYAGIAIGTEMS 270
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG--DVGDH 186
GGV NV E++ ++KT RGG++ ++ VY + I+I G D H
Sbjct: 271 GGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDV----VY-----QNIRITGHIDQAIH 321
Query: 187 PD-------------DKFNPNALPVVNGITIKDVWGTKV----QQSGLIQGLKNSPFTGI 229
D + + PN LP + + + GT+ + GL SP +
Sbjct: 322 VDMYHYHNTPNPSCSNNYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLPESPIEYV 381
Query: 230 CLSNINLQGVAGPTSPPLKCSDVSGSAYQ--VKPW-PCSELSS 269
L NI+ +S CS+V GS V PW PC E S
Sbjct: 382 FLENISFPTPV--SSLGWNCSNVQGSVKNNSVTPWPPCPEFPS 422
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ + L F R +L+E + S +IIISNV F N+P+WN+HP YC+NV I VTILAP +SPN
Sbjct: 81 FHAKELKFIRGHLLELLYSENIIISNVTFVNAPYWNLHPTYCTNVTISGVTILAPVNSPN 140
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG- 120
TDGIDP SSS V IED YI +GDD VAVKSGWDEYGI + PS I I+R+T SP S
Sbjct: 141 TDGIDPKSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSPTSAM 200
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKT 152
IA+ SE SGG+ +V A+ N I VKT
Sbjct: 201 IALSSEMSGGIRDVRAKDSVAINTESAIRVKT 232
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 131/233 (56%), Gaps = 5/233 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP +I ++ I+++ NSP W +HPVYC NV+I ++I+ P +SPNTDGID
Sbjct: 151 LKYPRPRMINLYRCENVKIADLTITNSPSWTVHPVYCRNVIIDGISIIQPYESPNTDGID 210
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD + V I + YI GDD + +KSG++E+G G P I I T + S + +GSE
Sbjct: 211 PDCCNGVRISNCYIDCGDDCITLKSGYNEHGRKKGIPCENIVISNCTFAHGRSAVGIGSE 270
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG-D 185
SGG++NV + G+ VKT GRGG + NI S + MEN R+GI I D+G +
Sbjct: 271 MSGGIKNVTVMNCVFKGTLRGLRVKTGRGRGGTVENIFASGIIMENLREGISI--DMGYE 328
Query: 186 HPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
K P + P I KD+ GT V+Q+ I GL +P I L +I +
Sbjct: 329 GVSGKIYPVTESTPFFKNIRFKDIIGTNVEQAINIIGLAEAPPQFIVLEDIRM 381
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 105/151 (69%), Gaps = 5/151 (3%)
Query: 1 MW----RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
MW + L +TR LIE M+S +I ISN+ NSP WNIHPVY SN+V++ +TILAP
Sbjct: 175 MWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAP 234
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
+SPNTDGI+PDS S+V IED YI +GDD VA+KSGWDEYGI+YG PS I IRR+T S
Sbjct: 235 TNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVS 294
Query: 117 PFSG-IAVGSETSGGVENVLAEHINLYNVGV 146
P S IA+GSE SGG + + + GV
Sbjct: 295 PTSAVIALGSEMSGGGVRAAPDDAHHHEAGV 325
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 135/258 (52%), Gaps = 33/258 (12%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LIE +S ++ ISN+ +SP W+IHPVYC NV+I+ V I P DS NTDGI+P
Sbjct: 185 RPMLIEIQSSENVQISNINLIDSPMWSIHPVYCRNVIIKGVKISNPIDSANTDGINP--- 241
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGSETSG 129
G P + IRR + +P +GIA+GSE SG
Sbjct: 242 -----------------------------VGRPIEMLLIRRFSCIAPNGAGIAMGSEMSG 272
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
G++ V E + L+N I ++T +GRGG+++N+ ++ ++ + G P D
Sbjct: 273 GIKGVRMEDVTLHNTQSAIKIETAMGRGGYVQNVWARRFTIKTSKYVFLMTGSHKPIPRD 332
Query: 190 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 249
P A PVV I +D+ G V S ++G+K++PFTG+C+SN+++ + C
Sbjct: 333 GNIPKAKPVVTNINFRDITGENVSTSAKLEGMKSNPFTGVCMSNVSISLSPNASKQQFHC 392
Query: 250 SDVSGSAYQVKPWPCSEL 267
D+ G + VKP PCS L
Sbjct: 393 MDIVGESRSVKPQPCSLL 410
>gi|147772320|emb|CAN69072.1| hypothetical protein VITISV_012807 [Vitis vinifera]
Length = 111
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 84/108 (77%)
Query: 170 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 229
ME AR GIKIAGDVGDHPDD FNPNALPVV G+ I+DVWG V Q G I GLKNSPFTGI
Sbjct: 1 MEKARTGIKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGI 60
Query: 230 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACS 277
CLS INL G P + P KCSDVSG+A V PWPCSEL+S QTG+CS
Sbjct: 61 CLSKINLHGKIKPGTAPWKCSDVSGAAVGVSPWPCSELTSPGQTGSCS 108
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 138/264 (52%), Gaps = 9/264 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 67
RP I+F +++I NV NSPFW I+P +C NV + VTI P+ P NTDGI+P
Sbjct: 187 RPPFIQFYECNNVLIENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINP 246
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGSEM 306
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGGV V + + GI +K++ GRGG + + V ++ M+N ++ I D+
Sbjct: 307 SGGVRRVTISNCVFDGIDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIF-DLFYDK 365
Query: 188 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG---P 242
+ K P PV I + ++ G+ ++Q G I+G++ P G+ SNIN++ G
Sbjct: 366 ESKMEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKAEVGFIVD 425
Query: 243 TSPPLKCSDVSGSAYQVKPWPCSE 266
+ ++ +V S+ PW S+
Sbjct: 426 IAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 134/241 (55%), Gaps = 13/241 (5%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
R + F RP L++F N ++ + V +NSPFW +HPVYC N+++R +TI P D+PNTDG
Sbjct: 155 REVQFLRPALVQFYNCTNVRLEQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDG 214
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
ID DS +NV I D +S GDD +A+KSG E GI P+ +T+R T G+ +G
Sbjct: 215 IDIDSCTNVQIVDCEVSVGDDGIALKSGSGEDGIRVNRPTRNVTVRGCTVRDAHGGMVIG 274
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI----- 179
SET+ G+ +VLAE+ G+ +K+ GRGG I ++ + ++ ME+ I I
Sbjct: 275 SETAAGIRHVLAENCRFPGTDRGVRIKSRRGRGGEIYDVKLRNLVMEDNLCPIAINMYYK 334
Query: 180 AGDVGDHPDDKFNPNALPVVNGIT-IKDVWGTKVQQS------GLIQGLKNSPFTGICLS 232
G+ D F+ +A PV + + DV T V+ S G I GL SP + +
Sbjct: 335 CGET-DPKSPLFSLDAQPVTDSTPHVHDVEITGVRASGCKASAGFIAGLPESPVGNLVIK 393
Query: 233 N 233
+
Sbjct: 394 D 394
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 9/264 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 67
RP I+F +++I NV NSPFW I+P +C NV + VTI P+ P NTDGI+P
Sbjct: 187 RPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINP 246
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGSEM 306
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGGV V + GI +K++ GRGG + + V ++ M+N ++ I D+
Sbjct: 307 SGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIF-DLFYDK 365
Query: 188 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG---P 242
+ K P PV I + ++ G+ ++Q G I+G++ P G+ SNIN++ G
Sbjct: 366 ESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKAEVGFIVD 425
Query: 243 TSPPLKCSDVSGSAYQVKPWPCSE 266
+ ++ +V S+ PW S+
Sbjct: 426 IAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 9/264 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 67
RP I+F +++I NV NSPFW I+P +C NV + VTI P+ P NTDGI+P
Sbjct: 187 RPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINP 246
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGSEM 306
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGGV V + GI +K++ GRGG + + V ++ M+N ++ I D+
Sbjct: 307 SGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIF-DLFYDK 365
Query: 188 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG---P 242
+ K P PV I + ++ G+ ++Q G I+G++ P G+ SNIN++ G
Sbjct: 366 ESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKAEVGFIID 425
Query: 243 TSPPLKCSDVSGSAYQVKPWPCSE 266
+ ++ +V S+ PW S+
Sbjct: 426 IAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 12/249 (4%)
Query: 2 WRQRTLP--FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
+ +RT+ F RP+ + N ++I+I V F+NSPFW I+P +C NV + +TI P S
Sbjct: 174 YYKRTIDKHFFRPSFFQAYNCKNILIEGVTFKNSPFWTINPEFCDNVTVTGITINNP-HS 232
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
PNTDGI+P S +NV I + +IS GDD + +KSG D G YG + +TI T S
Sbjct: 233 PNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDADGRKYGKATENVTITNCTMLSGHG 292
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G+ +GSE SGG++ + + GI +K GRGG + +I V ++ M+N IK
Sbjct: 293 GVVIGSEMSGGIKKITISNCVFDGTDRGIRIKAARGRGGVVEDIRVDNIVMKN----IKE 348
Query: 180 AGDVGDHPDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
+ D DK NP P+ I I +V G V ++G ++G+ P I SNI
Sbjct: 349 EAIILDLFYDKDNPVEPVTERTPIFRNIHISNVTGGNVNKAGFVRGIVEMPIQNITFSNI 408
Query: 235 NLQGVAGPT 243
N+ G G T
Sbjct: 409 NMDGKEGFT 417
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 9/264 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 67
RP I+F +++I NV NSPFW I+P +C NV + VTI P+ P NTDGI+P
Sbjct: 187 RPPFIQFYECNNVLIENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGINP 246
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGHGGVVIGSEM 306
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGGV V + GI +K++ GRGG + + V ++ M+N ++ I D+
Sbjct: 307 SGGVRRVTISNCVFDGTDSGIRLKSSRGRGGVVEELRVDNIVMKNIQRNAFIF-DLFYDK 365
Query: 188 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG---P 242
+ K P PV I + ++ G+ ++Q G I+G++ P G+ SNIN++ G
Sbjct: 366 ESKVEPVSERTPVFRNIHLSNITGSDIKQIGYIKGIEEMPVQGLSFSNINMKAEVGFIVD 425
Query: 243 TSPPLKCSDVSGSAYQVKPWPCSE 266
+ ++ +V S+ PW S+
Sbjct: 426 IAEDIRFDNVDFSSQTGSPWQFSK 449
>gi|357494033|ref|XP_003617305.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518640|gb|AET00264.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 156
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 118/195 (60%), Gaps = 42/195 (21%)
Query: 89 VKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGI 148
+KSGWD+YGI+YG SS ITIR V+GSSPF GIA SETSG V+NV +GI
Sbjct: 1 MKSGWDKYGISYGRLSSSITIRHVSGSSPFIGIAGVSETSGRVDNV---------NDMGI 51
Query: 149 HVKTNIGRGGFIRNITVSDVYME-NARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDV 207
K VY+ ++GI+I+GDVGDHPDDK + NALP+V
Sbjct: 52 EYKC---------------VYIYGECKEGIQISGDVGDHPDDKCDLNALPIV-------- 88
Query: 208 WGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS--PPLKCSDVSGSAYQVKPWPCS 265
++GLIQG+KNSPFT ICLS+INL V G S P KCSDV G A QV PWPC
Sbjct: 89 ------KAGLIQGMKNSPFTDICLSDINLHEVNGTRSRTPSCKCSDVFGVALQVSPWPCP 142
Query: 266 ELSSSQQTGACSNHF 280
EL S Q G+C +++
Sbjct: 143 EL-ISHQLGSCVSYY 156
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 5/236 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
LP+ RP+LIEF++S++I+I V QNSP W IHPVYC +V + V I+ P S NTDG+D
Sbjct: 281 LPYARPSLIEFLHSQNILIQGVTVQNSPSWTIHPVYCDHVTLADVHIVNPPTSDNTDGVD 340
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PDS + + I D S GDD +A+KSG D G G PS I +R + G+++GSE
Sbjct: 341 PDSVNGMQIIDDTFSVGDDDIAIKSGKDAEGRRIGIPSQNIVVRNCHMLNGH-GVSIGSE 399
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
SGGV+NVL E+ + G+ +KT GRGG ++NIT V M N + I +
Sbjct: 400 MSGGVQNVLVENCDFDGTNAGLRIKTLRGRGGIVQNITFDHVSMSNIQAQAFIIDENYAS 459
Query: 187 PDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
P +A P + + ++ +Q+ GL P I N+ + G
Sbjct: 460 NGSALPPGPVTDATPAIRNLNFDNITVNGAKQAMYFSGLAELPIQNIAFHNVAING 515
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 143/273 (52%), Gaps = 21/273 (7%)
Query: 13 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD---------SPNTD 63
+LI N R ++I+ F+ + ++ N + Y T+ P D S T
Sbjct: 33 SLIHGQNLRDVVITA--FE-------YIIHVLNALALYQTLEVPVDIHPFFYNILSILTL 83
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS-GIA 122
+ DS +V IE+ YIS GDD +A+KSGWD+YGIAYG PSS I IR VT S S GI+
Sbjct: 84 ALVTDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVTARSLVSAGIS 143
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD 182
+GSE SGGV NV E++ ++ G+ +KT GRGG+IRNI+ ++ +N R GI I D
Sbjct: 144 IGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDNVRAGIVIKVD 203
Query: 183 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
+H DD ++ A P + I+ K + G V+ G P I ++++ G++
Sbjct: 204 YNEHADDGYDRTAFPDITSISFKGIHGQGVRVPVRAHGSDVIPIKDISFQDMSV-GISYK 262
Query: 243 TSPPLKCSDVSGSAYQ-VKPWPCSELSSSQQTG 274
+CS + G + V P PC L + G
Sbjct: 263 KKHIFQCSYLEGRVIRPVFPKPCENLDVYDEQG 295
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 107/167 (64%), Gaps = 2/167 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ I+FM I++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+
Sbjct: 691 RPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPEST 748
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SNV IE+ TGDD +A+K+G D G G PS I IR S +G+ +GSE SGG
Sbjct: 749 SNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGG 808
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
VEN+ ++I + V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 809 VENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 855
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 107/167 (64%), Gaps = 2/167 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ I+FM I++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+
Sbjct: 691 RPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPEST 748
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SNV IE+ TGDD +A+K+G D G G PS I IR S +G+ +GSE SGG
Sbjct: 749 SNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGG 808
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
VEN+ ++I + V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 809 VENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 855
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 107/167 (64%), Gaps = 2/167 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ I+FM I++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+
Sbjct: 691 RPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPEST 748
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SNV IE+ TGDD +A+K+G D G G PS I IR S +G+ +GSE SGG
Sbjct: 749 SNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGG 808
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
VEN+ ++I + V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 809 VENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 855
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 107/167 (64%), Gaps = 2/167 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ I+FM I++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+
Sbjct: 674 RPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPEST 731
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SNV IE+ TGDD +A+K+G D G G PS I IR S +G+ +GSE SGG
Sbjct: 732 SNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGG 791
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
VEN+ ++I + V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 792 VENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 838
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 107/167 (64%), Gaps = 2/167 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ I+FM I++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+
Sbjct: 693 RPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPEST 750
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SNV IE+ TGDD +A+K+G D G G PS I IR S +G+ +GSE SGG
Sbjct: 751 SNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGG 810
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
VEN+ ++I + V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 811 VENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 857
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 125/248 (50%), Gaps = 13/248 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L++ M+ +++ + QNSPFWN H VYC +V +R V P+ +PN DG+D D
Sbjct: 160 FLRPPLLQLMHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVD 219
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S SNV I D + GDD + +KSG DE G G P+ + + T G+ +GSET+
Sbjct: 220 SCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHGGVVLGSETA 279
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GG+ NV + GI +KTN RGG + N+ +S++YME+ + I H
Sbjct: 280 GGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINA-FYKHGI 338
Query: 189 DKFN-----PNALPVVNG------ITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 236
D+ N P A+PV G I I DV + +G I GL P + L ++
Sbjct: 339 DESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTF 398
Query: 237 QGVAGPTS 244
+ P
Sbjct: 399 EMTLDPAE 406
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 107/167 (64%), Gaps = 2/167 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ I+FM I++ + +NSPFW IHPVYC NV++R +TI + PN DG DP+S+
Sbjct: 691 RPSCIQFMGCSRILVEGITIKNSPFWTIHPVYCDNVIVRSITI--DSHYPNNDGCDPEST 748
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SNV IE+ TGDD +A+K+G D G G PS I IR S +G+ +GSE SGG
Sbjct: 749 SNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQSECNGLCIGSEMSGG 808
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
VEN+ ++I + V ++ K+N RGG+IRNI VS++ +E ++ +
Sbjct: 809 VENIYMDNIQIGTVKNALYFKSNRDRGGYIRNIQVSNITIERSKGAV 855
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 125/248 (50%), Gaps = 13/248 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L++ M+ +++ + QNSPFWN H VYC +V +R V P+ +PN DG+D D
Sbjct: 161 FLRPPLLQLMHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVD 220
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S SNV I D + GDD + +KSG DE G G P+ + + T G+ +GSET+
Sbjct: 221 SCSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCTMLHGHGGVVLGSETA 280
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GG+ NV + GI +KTN RGG + N+ +S++YME+ + I H
Sbjct: 281 GGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINA-FYKHGI 339
Query: 189 DKFN-----PNALPVVNG------ITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 236
D+ N P A+PV G I I DV + +G I GL P + L ++
Sbjct: 340 DESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTF 399
Query: 237 QGVAGPTS 244
+ P
Sbjct: 400 EMTLDPAE 407
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Query: 2 WRQ-RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
W Q ++ TR +LIEFM S+ I I ++ ++SPFWN H V +R V I A +SP
Sbjct: 132 WDQVHSMTVTRGHLIEFMYSKDIRIYDLSMRDSPFWNNHFYDSERVHVRNVHISAKDNSP 191
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG DPDS+ +V +E S GDD VA+KSGWD +G+AYG PS ITIR V + +G
Sbjct: 192 NTDGWDPDSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSRNITIRDVNCTGSKAG 251
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGI-HVKTNIGRGGFIRNI 163
IA+GSE SGGVE+VL + +N+ GI HVKT RGG++RN+
Sbjct: 252 IAIGSEMSGGVEDVLVQRVNILGKANGIAHVKTGPTRGGYVRNV 295
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 67
RP I+F +I+I NV NSPFW I+P +C N+ + VTI P+ +P NTDGI+P
Sbjct: 190 RPPFIQFFECNNIVIENVKIINSPFWTINPAFCDNITVHGVTINNPSKNPKGPNTDGINP 249
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
S SNV I D +IS GDD + +KSG D G YG P +TI S G+ +GSE
Sbjct: 250 TSCSNVRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITNCIMLSGHGGVVIGSEM 309
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGGV+ V + GI +K + GRGG + +I V ++ M+N + I D+
Sbjct: 310 SGGVKRVAISNCVFDGTDAGIRLKASRGRGGVVEDIRVDNIVMKNIGRNAFIF-DLFYDK 368
Query: 188 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
K P PV I + ++ G+ V+Q G I+G++ P + SNIN++ G
Sbjct: 369 LSKPEPVSERTPVFRNIHLSNITGSDVKQIGYIKGIEEMPINELSFSNINMEAEKG 424
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/238 (34%), Positives = 124/238 (52%), Gaps = 6/238 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD--SPNTDGIDPD 68
RP + + + ++I V F++SP W + PV+CS+++IR+ TIL P S NTDGIDPD
Sbjct: 173 RPVFCQPIECKRVLIEGVTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHNTDGIDPD 232
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ NV IE + TGDD + +K+G DE G PS I IR S GI +GSE S
Sbjct: 233 ACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPSENILIRHCEIRSGHGGITIGSEMS 292
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-KGIKIA---GDVG 184
GV N+ A I +KT GRGGFI++I + ++ R +++ GD
Sbjct: 293 AGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTL 352
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
+ P D N +P V I I++V +++ ++GL P + L N+ + P
Sbjct: 353 EKPPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIHAFQNP 410
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 134/247 (54%), Gaps = 8/247 (3%)
Query: 2 WRQRTL--PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
+ +RT+ F RP+ + N ++I+I V FQNSPFW I+P +C NV + ++I P S
Sbjct: 172 YYKRTVDKKFFRPSFFQAYNCKNILIEGVTFQNSPFWTINPEFCDNVTVTGISIFNP-HS 230
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
PNTDGI+P S +NV I + +IS GDD + +KSG D G YG + +TI T S
Sbjct: 231 PNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGHG 290
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--- 176
G+ +GSE SGG++ + + GI +K+ GRGG + +I V ++ M+N ++
Sbjct: 291 GVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIV 350
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+ + D G + P+ I + ++ + V ++G I G+ P I SNIN+
Sbjct: 351 LSLFYDKGTQVEPV--TEKTPIFRNIHMSNITASNVNKAGQILGITEMPIQNITFSNINM 408
Query: 237 QGVAGPT 243
G G T
Sbjct: 409 DGKEGFT 415
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 124/248 (50%), Gaps = 13/248 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L++ M+ +++ + QNSPFWN H VYC +V +R V P+ +PN DG+D D
Sbjct: 161 FLRPPLLQLMHCEEVVLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVD 220
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S SNV I D + GDD + +KSG D G G P+ + + T G+ +GSET+
Sbjct: 221 SCSNVRISDCHFDVGDDCLCLKSGIDADGRRVGRPTENVAVTNCTMLHGHGGVVLGSETA 280
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GG+ NV + GI +KTN RGG + N+ +S++YME+ + I H
Sbjct: 281 GGIRNVTISNCIFIGTDRGIRIKTNRARGGGVENVRISNIYMEDVLCPLAINA-FYKHGI 339
Query: 189 DKFN-----PNALPVVNG------ITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 236
D+ N P A+PV G I I DV + +G I GL P + L ++
Sbjct: 340 DESNPLLTSPEAVPVTEGTPVIRHIQISDVTAKNARAAAGFIYGLPEMPIEDVALRHVTF 399
Query: 237 QGVAGPTS 244
+ P
Sbjct: 400 EMTLDPAE 407
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 133/251 (52%), Gaps = 9/251 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 67
RP I+F +I+I NV NSPFW I+P +C NV I VTI P+ +P NTDGI+P
Sbjct: 187 RPPFIQFYECTNILIENVKIINSPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGINP 246
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEM 306
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGGV+ V + GI +K + GRGG + +I V ++ M+N +G D+
Sbjct: 307 SGGVKRVAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNI-QGDAFIFDLFYDR 365
Query: 188 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGVAGP 242
K P P+ I + +V G +++ G I+G++ P + + SN+N+ QG
Sbjct: 366 LSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPVSELSFSNMNIVAEQGFKAE 425
Query: 243 TSPPLKCSDVS 253
T+ ++ ++VS
Sbjct: 426 TATDIRFNNVS 436
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 134/247 (54%), Gaps = 8/247 (3%)
Query: 2 WRQRTL--PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
+ +RT+ F RP+ + N ++I+I V F+NSPFW I+P +C NV + ++I P S
Sbjct: 172 YYKRTVDKKFFRPSFFQAYNCKNILIEGVTFKNSPFWTINPEFCDNVRVTGISIFNP-HS 230
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
PNTDGI+P S +NV I D +IS GDD + +KSG D G YG + +TI T S
Sbjct: 231 PNTDGINPSSCTNVHISDCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGHG 290
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--- 176
G+ +GSE SGG++ + + GI +K+ GRGG + +I V ++ M+N ++
Sbjct: 291 GVVIGSEMSGGIKKITISNCVFDGTDRGIRIKSARGRGGVVEDIRVDNIVMKNIKEEAIV 350
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+ + D G + P+ I + ++ + V ++G I G+ P I SNIN+
Sbjct: 351 LSLFYDKGTTVEPV--TEKTPIFRNIHMSNITASNVNKAGQILGITEMPIQNITFSNINM 408
Query: 237 QGVAGPT 243
G G T
Sbjct: 409 DGKEGFT 415
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R L +RPNL+EF+ S I+ISN+ F NSP W+IHPVYCSNV + VTI D+P T
Sbjct: 171 RSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLT 230
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGI 121
DGI PDS SN+CIEDS IS + +++KSGWD YGI++G P+S I I RV SS + +
Sbjct: 231 DGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAAL 290
Query: 122 AVGSETSGGVENVLAEHINLYNVGVG 147
A GSE SGG+ ++ H+ +++ G
Sbjct: 291 AFGSEMSGGISDIHVNHLRIHDSSKG 316
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 152/281 (54%), Gaps = 8/281 (2%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP-ADSPN 61
RQ F RP I+F++S++I+I ++ +NSPFW I+P +C NV + VTI P +++PN
Sbjct: 171 RQMKRGFLRPPFIQFLHSKNILIEGIMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPN 230
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGI+P+S SNV I D +IS GDD + +KSG D G + P+ TI T G+
Sbjct: 231 TDGINPESCSNVHISDCHISVGDDCITIKSGKDIPGRSKNRPAENYTITNCTMLRGHGGV 290
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIA 180
+GSE SGGV+ + + GI +KT GRGG + +I VS++ M+N A + I +
Sbjct: 291 VIGSEMSGGVKKIAISNCIFDGTDRGIRIKTARGRGGVVEDIRVSNIVMKNIAEQAIVLD 350
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
+ ++ + P I + ++ Q+ LI G++ P +GI L+++ +
Sbjct: 351 MEYAKGAEEPVSERT-PTFRNIRLSNITAY-TNQALLINGIREMPVSGISLNDVVFEARQ 408
Query: 241 GPTSPPLK-CSDVSGSAYQVKPWPCSELSSSQQTGACSNHF 280
G LK +D+S + +++ + L + Q N+F
Sbjct: 409 GIV---LKNAADISLNNVKIRIPAGTALKADQVERLDVNNF 446
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R L +RPNL+EF+ S I+ISN+ F NSP W+IHPVYCSNV + VTI D+P T
Sbjct: 171 RSHELNHSRPNLLEFLYSEDIVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDAPLT 230
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGI 121
DGI PDS SN+CIEDS IS + +++KSGWD YGI++G P+S I I RV SS + +
Sbjct: 231 DGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLLSSSGAAL 290
Query: 122 AVGSETSGGVENVLAEHINLYN 143
A GSE SGG+ ++ H+ +++
Sbjct: 291 AFGSEMSGGISDIHVNHLRIHD 312
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 138/253 (54%), Gaps = 24/253 (9%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SP 60
W R+ RP LI F +S I++ N+ QNSP W I P Y +++V R +T+ AP S
Sbjct: 134 WPDRSAANKRPRLIVFRHSSHILMENITVQNSPSWQIVPYYSTDLVFRNMTVYAPDRVSH 193
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGW------DEYGIAYGHPSSGITIRRVTG 114
NTDGIDP SSS+V IE I TGDD +A+KSG DE PS I IR
Sbjct: 194 NTDGIDPFSSSHVLIEHVTIDTGDDNIAIKSGQPNSPGGDE-------PSHDIVIR---- 242
Query: 115 SSPF---SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 171
S F G+++GSE +GGV NVLAE I+ G G+ +K+N RG +++ D+ ME
Sbjct: 243 DSTFLHGHGLSIGSEVAGGVYNVLAERIHFKGTGTGVRIKSNRDRGNELKHFVYRDLKME 302
Query: 172 NARKGIKIAG---DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 228
+ I I+ + D D + P + ITI+++ T +Q+ +I GL SP TG
Sbjct: 303 DVNTPILISEFYPKIPDVIDSQPVGRLTPRFSDITIENLTATGARQAAIIVGLPESPVTG 362
Query: 229 ICLSNINLQGVAG 241
+ L+N+ ++ G
Sbjct: 363 LKLTNVRIKADKG 375
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 130/244 (53%), Gaps = 12/244 (4%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
W +R F RP I+FMN +++ I ++ QNSPFW I+P YC NV + +TI P SPN
Sbjct: 177 WIERG--FLRPPFIQFMNCKNVQIKDIKIQNSPFWTINPQYCDNVTVDGITIDNPP-SPN 233
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGI+P+S NV I + +IS GDD + +KSG D G P+ TI T G+
Sbjct: 234 TDGINPESCRNVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCTMLRGHGGV 293
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
+GSE SGGV+N+ + GI +K+ GRGG + +I VS++ M N R
Sbjct: 294 VIGSEMSGGVKNIAITNCIFDGTDRGIRIKSARGRGGVVEDIRVSNIIMRNIRD----QA 349
Query: 182 DVGDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
V D K NP + P+ I I D+ + ++G + GL+ P + I +N+N+
Sbjct: 350 IVLDLQYAKTNPEPISERTPIFRNIHISDITAS-TNRAGYLNGLEELPISNISFNNVNMT 408
Query: 238 GVAG 241
G
Sbjct: 409 ANTG 412
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
+L ++RP++IE + S +IIISN+ F NSP W+IHPVYCSN+ I+ +T+ AP P T G
Sbjct: 53 HSLNYSRPHIIELVGSDNIIISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPTKFPYTSG 112
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV-TGSSPFSGIAV 123
I PDSS +VCI++ ISTG D + +KSGWDEYG+AYG P+S + IR V SS +G+A
Sbjct: 113 IVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSSSGAGLAF 172
Query: 124 GSETSGGVENVLAE 137
GSE SGG+ +++AE
Sbjct: 173 GSEMSGGISDIIAE 186
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 133/251 (52%), Gaps = 9/251 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 67
RP I+F +I+I NV NSPFW ++P +C NV I VTI P+ +P NTDGI+P
Sbjct: 187 RPPFIQFYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINP 246
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEM 306
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGGV+ + + GI +K + GRGG + +I V ++ M+N +G D+
Sbjct: 307 SGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNI-QGDAFIFDLFYDR 365
Query: 188 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGVAGP 242
K P P+ I + +V G +++ G I+G++ P + + SN+N+ +G
Sbjct: 366 LSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNIVAGKGFQAE 425
Query: 243 TSPPLKCSDVS 253
T+ ++ ++VS
Sbjct: 426 TATDIRFNNVS 436
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 133/251 (52%), Gaps = 9/251 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP---NTDGIDP 67
RP I+F +I+I NV NSPFW ++P +C NV I VTI P+ +P NTDGI+P
Sbjct: 187 RPPFIQFYECTNILIENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTDGINP 246
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
S NV I D +IS GDD + +KSG D G YG ITI S G+ +GSE
Sbjct: 247 SSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGHGGVVIGSEM 306
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGGV+ + + GI +K + GRGG + +I V ++ M+N +G D+
Sbjct: 307 SGGVKRIAISNCVFDGTNAGIRLKASRGRGGVVEDIRVDNIVMKNI-QGDAFIFDLFYDR 365
Query: 188 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGVAGP 242
K P P+ I + +V G +++ G I+G++ P + + SN+N+ +G
Sbjct: 366 LSKVEPVSERTPIFRNIHLSNVTGNDIKRIGYIKGIEEMPISELSFSNMNIVAGKGFQAE 425
Query: 243 TSPPLKCSDVS 253
T+ ++ ++VS
Sbjct: 426 TATDIRFNNVS 436
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats.
Identities = 80/238 (33%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD--SPNTDGIDPD 68
RP + + + ++I V F++SP W + PV+C+++ +R+ TIL P S NTDGIDPD
Sbjct: 173 RPVFCQPIECKRVLIEGVTFRDSPSWTLQPVWCADLTLRHSTILNPPSPFSHNTDGIDPD 232
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ NV IE + TGDD + +K+G DE G P I IR S GI +GSE S
Sbjct: 233 ACRNVLIEHCVVDTGDDAICIKAGRDEDAWEAGIPCENILIRHCEIRSGHGGITIGSEMS 292
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-KGIKIA---GDVG 184
GV N+ A I +KT GRGGFI++I + ++ R +++ GD
Sbjct: 293 AGVRNLHAHDCTCDGTDTAIRIKTKPGRGGFIKDILIENITARRIRHAAVELTFHYGDTL 352
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
+ P D N +P V I I++V +++ ++GL P + L N+ + P
Sbjct: 353 EKPPDPKNLKHVPAVENILIRNVRCDSAREALHLRGLPGHPLKNVTLQNLEIHAFQNP 410
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 91 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 149
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ + ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 150 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 209
+KT GRGG++R++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKDIIG 120
Query: 210 TKVQQSGLIQGLKNSPF 226
+++ +G ++G++N+PF
Sbjct: 121 XEIKTAGSVEGIQNAPF 137
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 125/251 (49%), Gaps = 23/251 (9%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
R F RP L++ +SR ++I +I +NS FWN H +Y V IR V+ P D+PNTDG
Sbjct: 156 RESHFLRPPLLQVKDSRRVVIEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDG 215
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
++ DSS NV IED GDD + +KSG DE G G P+ + IR GI G
Sbjct: 216 LNVDSSRNVRIEDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVCG 275
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA----------R 174
SE +GGV NV+ + GI +K+ GRGGF+ N+ V + ME R
Sbjct: 276 SEIAGGVRNVVVTGCIFQDTDRGIRIKSRRGRGGFVENVMVHQIVMERVLVPLVVNLYYR 335
Query: 175 KGIKIAGDVGDHPDDKFNPNALPV--------VNGITIKDVWGTKVQQS-GLIQGLKNSP 225
GI D G+ + LP+ V I+I V+ T V+ S G + GL P
Sbjct: 336 CGI----DPGEEETISRLASLLPLPVDETTPAVRNISISQVFATGVKSSAGFLLGLPERP 391
Query: 226 FTGICLSNINL 236
G+ LS+ +
Sbjct: 392 IEGLMLSDYRV 402
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 128/227 (56%), Gaps = 7/227 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP IE +N R+I+I V ++ FW IHP+ C+NV +R V+I + + N+DG DP+S+
Sbjct: 201 RPAFIEPLNCRNILIEGVRIIDATFWVIHPIGCNNVTVRNVSI--DSFNANSDGFDPEST 258
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+N +E+ + TGDD +A+KSG D+ G G P+ I +R T S SG+ +GSE SGG
Sbjct: 259 TNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRNSTFESLASGVCIGSEISGG 318
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V NV E+I + I+ K+N+ RGG++ N + +V M++ I+ D +
Sbjct: 319 VRNVFIENIKIPKASNAIYFKSNLDRGGYMENTWIRNVNMDSVGTAIRFDPDYKSESKE- 377
Query: 191 FNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 236
N N TI+++ +SG+ + G K+ P T + L N+ +
Sbjct: 378 ---NYATRFNNFTIENINCAYASRSGIEVNGFKDMPITNVALKNVRI 421
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 115/229 (50%), Gaps = 2/229 (0%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L + S ++ +S + +NSPFWN H VY NV + V + PAD+PN DGID DSS
Sbjct: 158 RPPLFQVDRSTNVSVSGITLRNSPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSS 217
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I D Y++ GDD V +KSG DE G G P+SGIT+ T + G+ +GSE SG
Sbjct: 218 RYVRISDCYLNAGDDAVCIKSGKDEEGRRIGRPASGITVTNCTVEAGHGGVVIGSEMSGD 277
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +KT GRGG + + ++ M I G D
Sbjct: 278 VRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDCRFDNLVMRRVACPFTINGYYFMDIDSD 337
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
P + P+V I D+ V+ +G GL F I SN+ +
Sbjct: 338 PIPVDESTPMVRNIAYSDIIARDVETAGFFAGLPEQRFENISFSNVEID 386
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 142/270 (52%), Gaps = 26/270 (9%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
W Q LP RP LI F + + I + N+ QNS W I P Y ++V R + +LAP S N
Sbjct: 136 WPQPNLP--RPRLIVFDHCKHIRMENITAQNSAMWQIVPYYSDDLVFRNMKVLAPQTSHN 193
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS-PF-- 118
TDGIDP +S+ + I+ YI TGDD VA+KSG G P + R +T + F
Sbjct: 194 TDGIDPFASTKIVIDHVYIDTGDDNVAIKSGQP------GSPGPDLPSRDITITDCEFLH 247
Query: 119 -SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
G+++GSE +GGV+NV AE I+ GI VK+N RG I N D+ MEN + I
Sbjct: 248 GHGLSIGSEIAGGVQNVRAERIHFKGTDQGIRVKSNRDRGNDIGNFVFRDITMENVKTAI 307
Query: 178 -------KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 230
KI + + P + P+ + ITI++V + + +I GL SP +
Sbjct: 308 LLSEFYPKIPDTITEEPVTRLTPH----FHDITIENVQAVGSRDAAVIVGLPESPIRNLK 363
Query: 231 LSNINLQGVAGPTSPPLKCSDVSGSAYQVK 260
L+N+++ + G T ++ +D+ + + VK
Sbjct: 364 LTNVHISAIHGAT---IQYTDLVATDFVVK 390
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 91 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 149
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ + ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 150 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 209
+KT GRGG++R++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 210 TKVQQSGLIQGLKNSPF 226
+++ +G ++G++N+PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ ++ +S V +NSPFWN H VY NV I V I PAD+PN DGID DSS
Sbjct: 181 RPPLLQVFDAENVTVSGVTLRNSPFWNTHVVYSENVTITDVNIENPADAPNGDGIDIDSS 240
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I D+YI+ GDD + +KSG D G G P+S IT+ T + G+ +GSE SG
Sbjct: 241 RYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGD 300
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +KT GRGG + ++ + M I G D
Sbjct: 301 VRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSD 360
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
P P+V ++ ++ V+ +G GL F GI ++ +
Sbjct: 361 PEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRIDAT 411
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 124/260 (47%), Gaps = 15/260 (5%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
++R + RP LI F + I+I V NSP W I+PV C V I VTI+ P DSP
Sbjct: 124 LFRAKAFTHPRPRLIAFTRCKDILIEGVTLVNSPAWTINPVMCERVTIDKVTIINPPDSP 183
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDPDSS NV I + YI GDD +A+K+G ++ Y P I I G
Sbjct: 184 NTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGREDS--LYRTPCENIVIANCLMRHGHGG 241
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI- 179
+ +GSETSGG+ V+ + + GI +K+ GRGGF+ ++ +++ ME +
Sbjct: 242 VVIGSETSGGIRKVVITNCIFEDTDRGIRLKSRRGRGGFVEDLRATNIIMEKVLCPFVLN 301
Query: 180 -----AGDVGDHPDDKFNPN----ALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGI 229
G V D P+ A P ++ + +VQ + + GL P +
Sbjct: 302 MYYDTGGGVIDERAHDLEPHPVSEATPSFRRLSFSHITAREVQAAAAFLYGLPEQPLEDV 361
Query: 230 CLSN--INLQGVAGPTSPPL 247
+ I L A P P +
Sbjct: 362 LFDDIWIELAADASPARPAM 381
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 91 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 149
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ I ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 150 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 209
+KT GRGG+++++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 210 TKVQQSGLIQGLKNSPF 226
+++ +G ++G++N+PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 124/251 (49%), Gaps = 23/251 (9%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
R F RP L++ +SR ++I ++ +NS FWN H +Y V IR V+ P D+PNTDG
Sbjct: 156 RESHFLRPPLLQVKDSRRVVIEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDG 215
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
++ DSS NV IED GDD + +KSG DE G G P+ + IR GI G
Sbjct: 216 LNVDSSRNVRIEDCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCIMRRGHGGIVCG 275
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA----------R 174
SE +GGV NV+ + GI +K+ GRGGF+ N+ + + ME R
Sbjct: 276 SEIAGGVRNVVVTGCIFQDTDRGIRIKSRRGRGGFVENVMIHQIVMERVLVPLVVNLYYR 335
Query: 175 KGIKIAGDVGDHPDDKFNPNALPV--------VNGITIKDVWGTKVQQS-GLIQGLKNSP 225
GI D G+ + LP+ V I+I V T V+ S G + GL P
Sbjct: 336 CGI----DPGEEEIVSRLASLLPLPVDETTPAVRNISISQVLATGVKSSAGFLLGLPERP 391
Query: 226 FTGICLSNINL 236
G+ LS+ +
Sbjct: 392 IEGLVLSDYRV 402
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 100/168 (59%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
R L F RP LI+F+N ++I + NV QNSPFWN H +CS+ I V + P ++PNTDG
Sbjct: 158 RELQFLRPPLIQFLNCKNITLQNVTLQNSPFWNTHFAFCSDCTITGVHFINPKEAPNTDG 217
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
++ DS S++ I++ GDD + +KSG E GI P+ I I T + G+ +G
Sbjct: 218 LNIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENILIDSCTMKNGHGGVVIG 277
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
SET+GG+ N+ + ++ G+ +KT GRGG I NI + YM+N
Sbjct: 278 SETAGGINNIKITNCSMEETDRGLRIKTRRGRGGVIENIRLEHCYMKN 325
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 124/239 (51%), Gaps = 8/239 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL---APADSPNTDGIDP 67
RP I+ +N ++I V QNSP W IHP+Y N+ I V + +P DSPNTDG+DP
Sbjct: 318 RPRTIQLINCDGVLIQGVKVQNSPSWTIHPLYSKNITIADVNVKNPSSPVDSPNTDGLDP 377
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
DS N+ + ++ GDD +A+KSG D G G PSS ITIR G+ +GSE
Sbjct: 378 DSVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIRNSLMLHGHGGVTLGSEM 437
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDH 186
SGG+ N+ + + +G+ +KT GRGG I+++ ++ M+N + I + +
Sbjct: 438 SGGINNINIKDDIFDSTNIGVRLKTLRGRGGVIQDVVFDNIMMKNISSDAFNINSNYSSN 497
Query: 187 ----PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
P P + + K++ +++ QGL+ P G+ LSNIN+ G
Sbjct: 498 GAPLPYTGVVDETTPTIKNLVFKNITAIGAKEASFFQGLQEMPVDGVTLSNINVTADKG 556
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L + S ++ +S V +NSPFWN H VY NV I V I PAD+PN DGID DSS
Sbjct: 184 RPPLFQISESENVSVSGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSS 243
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I D+YI+ GDD + +KSG + G G P+S IT+ T + G+ +GSE SG
Sbjct: 244 RYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGD 303
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------DVG 184
V +V + + G+ +KT RGG + ++ ++ M I G D
Sbjct: 304 VRDVTVSNCTFTDTDRGVRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSD 363
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
P D+ P+V ++ ++ +V+ +G GL F GI +++ + +
Sbjct: 364 SEPVDE----GTPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFNDVQIDA-----T 414
Query: 245 PPLKCSDV 252
PL +D+
Sbjct: 415 RPLDATDL 422
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 91 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 149
SGWDEYGI YG PSS I IRRV G + SG+++GSE SGG++ V A+ I ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 150 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 209
+KT GRGG+++++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 210 TKVQQSGLIQGLKNSPF 226
+++ +G ++G++N+PF
Sbjct: 121 DEIKTAGSVEGIQNAPF 137
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 122/245 (49%), Gaps = 8/245 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPNTDGIDPDS 69
RP L + S ++ +S V QNSPFWN H VY NV I V +L PA+ +PN DGID DS
Sbjct: 159 RPPLFQISESENVTVSGVTLQNSPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDIDS 218
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
S V I D+YI+ GDD + +KSG + G G P+S IT+ T + G+ +GSE SG
Sbjct: 219 SRYVRISDAYINAGDDAICIKSGKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSG 278
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V +V + + G+ +KT RGG + ++ ++ M I G D
Sbjct: 279 DVRDVAVTNCTFTDTDRGVRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPLDS 338
Query: 190 KFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 247
+ P P+V +T ++ V+ +G GL F GI N+ + + PL
Sbjct: 339 EPEPVDEGTPMVRNVTFSNITARNVETAGFFAGLPEQYFEGIEFDNVRIDA-----TRPL 393
Query: 248 KCSDV 252
+D+
Sbjct: 394 DATDL 398
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 118/235 (50%), Gaps = 10/235 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L + S ++ +S V +NSPFWN H VY NV I V I PAD+PN DGID DSS
Sbjct: 159 RPPLFQIYGSENVSVSGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGDGIDIDSS 218
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I D+YI+ GDD + +KSG + G G P+S IT+ T + G+ +GSE SG
Sbjct: 219 RYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGD 278
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------DVG 184
V +V + + G+ +KT RGG + ++ ++ M I G D
Sbjct: 279 VRDVTVTNCTFTDTDRGVRIKTARNRGGVVEDLRFDNIVMRRIACPFTINGYYFMPLDSD 338
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
P D+ P+V ++ ++ +V+ +G GL F GI S++ +
Sbjct: 339 SEPVDE----GTPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFSDVQIDAT 389
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
Query: 91 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 149
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ I ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 150 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 209
+KT GRGG+++++ +S+V M+N GI G GDHPDD+++PNALP + IT KD+ G
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 210 TKVQQSGLIQGLKNSPF 226
+++ +G + G++N+PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 132/261 (50%), Gaps = 20/261 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN++ N + I++ V FQNSP WN+HP CS++ +R V + P + N DGID +
Sbjct: 216 FLRPNMVVLNNCKRILLEGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPWYAQNGDGIDLE 275
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS+N IE+S GDD + +KSG DE G G P+ + +R G +GSE S
Sbjct: 276 SSTNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCVVYHAHGGFVIGSEMS 335
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GG +N+ + + VG+ KT GRGG ++NI V+++ M++ A+
Sbjct: 336 GGAKNIFVYNCSFLGTDVGLRFKTTRGRGGVVQNIYVTNINMKDIGAEAILFDMYYMAKD 395
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ ++G+ D P + P A P I ++ + I+GL G+ L++
Sbjct: 396 PVALSGEKRDAPKVEVLPVTEATPQFKDFHISNIVCNGAATALFIRGLPEMNILGLYLND 455
Query: 234 INLQGVAGPTSPPLKCSDVSG 254
+ ++ G + C++ +G
Sbjct: 456 MVIKAKKG-----MVCTEATG 471
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ ++ +S V +NSPFWN H VY NV I V I PA +PN DGID DSS
Sbjct: 159 RPPLLQIFDAENVTVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSS 218
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I D+YI+ GDD + +KSG D G G P+S IT+ T + G+ +GSE SG
Sbjct: 219 RYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVANCTVEAGHGGVVIGSEMSGD 278
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +KT GRGG + ++ + M I G D
Sbjct: 279 VRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSD 338
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
P P+V ++ ++ V+ +G GL F GI ++ +
Sbjct: 339 PEPTGEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ ++ +S V +NSPFWN H VY NV I V I PA +PN DGID DSS
Sbjct: 159 RPPLLQVFDAENVTVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGDGIDIDSS 218
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I D+YI+ GDD + +KSG D G G P+S IT+ T + G+ +GSE SG
Sbjct: 219 RYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCTVEAGHGGVVIGSEMSGD 278
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +KT GRGG + ++ + M I G D
Sbjct: 279 VRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGYYFTPLDSD 338
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
P P+V ++ ++ V+ +G GL F GI ++ +
Sbjct: 339 PEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRIDAT 389
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ NS+ ++ +FQNSP WNIHP ++++R VT+ P S N DG+D +
Sbjct: 229 FLRPVMVSIQNSKRVLFDGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQNGDGLDVE 288
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
NV +E+S GDD + +KSG D+ G+ G P I +R G+ VGSE S
Sbjct: 289 CCKNVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRNNIVYHGHGGVTVGSEMS 348
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NARKGIKI 179
GGV+N+ + VG+ K+ GRGG + NI +SDV+M N G K
Sbjct: 349 GGVKNLHVSNCTFMGTDVGLRFKSARGRGGVVENIFISDVFMTDIPSQAISFNLYYGGKS 408
Query: 180 AGDVGDHPDDKFNPNALPVV------NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ + DK A+PV I+IK++ QQ+ +QGL I +SN
Sbjct: 409 IAETLEEGGDKIVNKAMPVTIETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEISN 468
Query: 234 INLQGVAG 241
+ + G
Sbjct: 469 LTVTAEKG 476
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 125/238 (52%), Gaps = 12/238 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F NS+ I I V NSPFW I+PV C NV I+ V I D N DGIDP+SS
Sbjct: 226 RPPFIQFYNSKDIRIMGVHIVNSPFWEINPVLCENVWIKGVHI--ETDLYNNDGIDPESS 283
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IED Y TGDD +A+KSG +E G G P++ + IR ++ GI +GSE SGG
Sbjct: 284 RNVLIEDCYFLTGDDCIAIKSGRNEDGRRIGVPTANVIIRHNRFANGHGGITLGSEISGG 343
Query: 131 VENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
V +V A H + N+ I KTN RGG + N+ V D + AR + A +
Sbjct: 344 VHDVFATGNHFDSPNLDYPIRFKTNAMRGGTLENVYVKDSVVNKARLAVVHADFFYEEGH 403
Query: 189 DKFNPNALPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
N LP ++ IT+ W + + + ++G ++ + ++ L+GV G
Sbjct: 404 AGEN---LPQLDNITLDGFWTAEGGSIDAKYAFYLKGFADALIENVTFRDMKLEGVKG 458
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
Query: 91 SGWDEYGIAYGHPSSGITIRRVTGSS-PFSGIAVGSETSGGVENVLAEHINLYNVGVGIH 149
SGWDEYGI YG PSS I IRRV G + SG+A+GSE SGG++ V A+ + ++N G+
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGLR 60
Query: 150 VKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWG 209
+KT GRGG++R++ +S+V M+N GI G GDHPDD+++PNAL + IT KD+ G
Sbjct: 61 IKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKDIIG 120
Query: 210 TKVQQSGLIQGLKNSPF 226
+++ +G + G++N+PF
Sbjct: 121 DEIKTAGSVXGIQNAPF 137
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 9/234 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L++ +NS ++ + + QNSPFW +HP+Y +N++ + +L P D+PNTDGID D
Sbjct: 159 FLRPPLVQILNSNNVKLEGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVD 218
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S V I+ + GDD +A+KSG G+A P++ I I T S G +GSET+
Sbjct: 219 SCRFVTIKKCLVDVGDDGIALKSGSGPDGVATNKPTTDILIEECTVKSAHGGAVIGSETA 278
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-------AG 181
G+ +V GI +KT GRGG I N+ S V M+N + + +
Sbjct: 279 AGIRDVRVHDCLFDGTDRGIRIKTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSL 338
Query: 182 DVGDHPDDKFN-PNALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSN 233
D D +K + + P + G+TI+D + S I GL SP + + N
Sbjct: 339 DPQDFSLEKLSITDTTPSIEGVTIEDCYSEDFTSSAAFIVGLPESPIRDLVIRN 392
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+ R++ L + RP I F S ++I + NSP W I+PV C+NVVI +TI PADSP
Sbjct: 123 LQREKQLKYPRPRFICFQESERVLIQGIKIINSPAWTINPVRCNNVVIDGITIKNPADSP 182
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+PDS NV I + YIS GDD VA+KSG EY Y P ITI T G
Sbjct: 183 NTDGINPDSCRNVRITNCYISVGDDCVAIKSGV-EYS-KYRIPCENITITNCTMLDGHGG 240
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI- 179
+ +GSE SG V N+ + GI +KT GRGG + +I VS++ M+ + +
Sbjct: 241 VVIGSEMSGCVRNITISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIIMKKVMCPLVMN 300
Query: 180 ----AGDVGDHP--DDKFNPNAL----PVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTG 228
G G P DK NP+ + PV + + ++ + +G GL P
Sbjct: 301 MYYFCGKGGKEPIVKDK-NPHPVNEGTPVFRRVHLSNISAREAGACAGFFYGLPEMPIED 359
Query: 229 ICLSN--INLQGVAGPTSPPL 247
I + I++ A P P +
Sbjct: 360 ISFHDVYIHMADDAKPDRPAM 380
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN I+ + ++++ V SP W ++PV C+NV +R + I A N DGIDP+
Sbjct: 177 FLRPNFIQVIGCENVLVEGVTLLRSPMWEVNPVLCTNVTVRGIHISTKA--ANNDGIDPE 234
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS+ V IED+Y TGDD +A+KSG + G A PS I IR + GI +GSE S
Sbjct: 235 SSNYVLIEDNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRNNIFADGHGGITIGSEVS 294
Query: 129 GGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG---DV 183
GGV NV A+ N N+ + KTN RGG I NI + + +++ + A +
Sbjct: 295 GGVNNVFADNNQFNSPNLKYALRFKTNAVRGGIIENIYLRNTTIQSVSDAVVHATMLYEE 354
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
G H D +P ITI+++ T ++ ++ P TG+ + N+ L V P
Sbjct: 355 GRHGD------YMPQFRNITIENLKSTGGDFGIFVEAFEDVPVTGLVMRNVELNEVENP 407
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 131/237 (55%), Gaps = 10/237 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++E +N ++I V F +SPFW IHP+ C NV +R VT+ + + N DG DP+
Sbjct: 192 YLRPAMLEPVNCTDVLIEGVTFVDSPFWVIHPLACENVTVRGVTV--DSYNLNNDGCDPE 249
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +NV IED TGDD +A+KSG D G P+ + IR + S +G+ +GSE S
Sbjct: 250 SCTNVLIEDCTFRTGDDGIAIKSGRDNDAWRIGRPTENVLIRNCSFRSKANGVCIGSEIS 309
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV NV+ E++ + +VG GI+ K+N+ RGG+I ++ V V ++ RK + + PD
Sbjct: 310 GGVRNVVVENVRMSDVGNGIYFKSNLDRGGYIEDVFVCGVEADSVRKTLVLF-----EPD 364
Query: 189 DKFNP--NALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 242
K N G I+DV ++G+ I+G + P + +S + L P
Sbjct: 365 YKSESRENHPTAFRGFVIEDVRAQWAGKAGIDIRGFADMPVRDVTISRLTLASTPEP 421
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 18/236 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I V NSPFW ++PV C++V++R VT + PN+DG DP+S
Sbjct: 239 RPPFVQPYECERVLIEGVTIVNSPFWLLNPVLCNDVIVRGVT--CDSMGPNSDGCDPESC 296
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V IED Y TGDD +A+KSG + G PS I IR G+ +GSE SGG
Sbjct: 297 DRVLIEDCYFDTGDDCIAIKSGRNHDGRRINRPSQNIVIRNCHMRRGHGGVVIGSEMSGG 356
Query: 131 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDV 183
V NV EH +N ++ G+ +KTN RGG + N D+ + + I I GD
Sbjct: 357 VRNVFVEHCEMNSPDLERGLRIKTNSVRGGVVENFFARDITIVEVKNAIVIDFQYEEGDA 416
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G+H P+V I + + K ++ ++G + SP + + L N + + V
Sbjct: 417 GEH---------TPIVRNIDFRGITCAKAERVFQVRGYERSPISNLALRNCDFKQV 463
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 129/255 (50%), Gaps = 13/255 (5%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L F RP LI+ +++ I V NSPFW ++P +C NV I VTI P SPNTDGI+
Sbjct: 184 LKFFRPPLIQPFRCKNVRIEGVTIVNSPFWTVNPAFCDNVTITGVTIENPP-SPNTDGIN 242
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P S NV I DS+IS GDD + +KSG D G + P+ +TI T S G+ +GSE
Sbjct: 243 PTSCRNVHISDSHISVGDDCITIKSGRDMDGRKWDTPTENVTITNCTMLSGHGGVVIGSE 302
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
SG + V + GI +K GRGG + I V +V M K I++ V +
Sbjct: 303 VSGSIRKVTISNCVFDGTDRGIRLKAARGRGGVVEEIRVDNVVM----KDIQLEAIVMNL 358
Query: 187 PDDKFNPNA-----LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QG 238
DK P I I +V G+++ +G I G+ P I SNIN+ +G
Sbjct: 359 FYDKNTKEGPVTEETPAFRNIHISNVTGSQINVAGKILGIPEMPIDQISFSNINMDAKEG 418
Query: 239 VAGPTSPPLKCSDVS 253
++ T+ ++ DV
Sbjct: 419 ISIHTATNVELHDVQ 433
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 16/232 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP IE ++ I + ++SPFW IHP++C+NV++R VT+ + + N DG DP+S
Sbjct: 209 RPGFIEPYGCVNVRIEGITIKDSPFWVIHPIFCNNVIVRDVTV--DSHNRNNDGCDPESC 266
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SNV IE STGDD +A+KSG D G P+ + IR T S +G+ +GSE SGG
Sbjct: 267 SNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCTFWSKINGVCIGSEISGG 326
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V NV E+I++ I+ K+N+ RGG+I NI V ++ ++ R + V P+ K
Sbjct: 327 VRNVFIENISILKSSNAIYFKSNLDRGGYIENIYVRNIQADSVRTAL-----VRVEPNYK 381
Query: 191 -----FNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 236
F+P + N IT+++V + + + + G P I L NI +
Sbjct: 382 GERSGFHPT---LFNKITVENVTCGQTNECAISMAGFPELPIRNITLKNITV 430
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 4/262 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN + F N R++++ P W IHPVY N++IR V +L + PN DGIDPDS
Sbjct: 202 RPNFVVFFNCRNVLMEGFTIGGGPNWTIHPVYSENIIIRRVHVLT--EGPNNDGIDPDSC 259
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE TGDD V +KSG++E G P+ + +R + + G+ VGSE SG
Sbjct: 260 RNVLIEHCVFDTGDDCVVLKSGYNEDGWRVARPTENVVMRWCSSARGHGGLVVGSEMSGD 319
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG-DVGDHPDD 189
V NV + + +K+ GRGG + NI ++ + + ++ + I D G +
Sbjct: 320 VRNVYMHDCDFAGTDRAVRIKSRRGRGGVVENIWAENLRVRDMQQEVVILNMDYGADRNQ 379
Query: 190 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKC 249
F P+ I ++ V + I GL +SP + ++ +Q G + ++
Sbjct: 380 AFTEKP-PLFRNIHVRRVTADGAPAAIRIAGLADSPIEHVTFEDLTIQSTRGVIAQHVRG 438
Query: 250 SDVSGSAYQVKPWPCSELSSSQ 271
+ A + P EL+ +Q
Sbjct: 439 LTFANVAIGPRIGPVFELTDAQ 460
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 116/238 (48%), Gaps = 3/238 (1%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP++I+ + S+ ++I + NS W ++P+ C V I +TI P SPNTDGI+
Sbjct: 161 LEYGRPHMIKLVRSKHVVIEGLHLINSASWTVNPLLCEFVRIDGITIENPVPSPNTDGIN 220
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S NV I +S I GDD V +KSG DE G G P ITI + +GSE
Sbjct: 221 PESCRNVQILNSRIDVGDDCVTLKSGKDEAGRRVGRPDENITITNCVMLKGHGAVTIGSE 280
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG-- 184
SGGV NV+ + VGI VK+ GRGG + VS+V M++ +
Sbjct: 281 MSGGVRNVVVSNCVFQGTDVGIRVKSQRGRGGIVEGFVVSNVVMQDVASAFTLTSFYAGT 340
Query: 185 DHPDDKFN-PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D P D F P + ++ + +G I GLK P I + + +Q G
Sbjct: 341 DKPGDLFPVGEGTPRLRDFRFSNITARGSKTAGQITGLKEMPIENITFTGVRIQAETG 398
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 12/237 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L++F R I + ++ QNSPFW H VY ++++R V IL PAD+ NTD +D D
Sbjct: 178 FLRPPLLQFWKCRHIRLEDITLQNSPFWTCHTVYSRDIILRGVKILNPADAINTDAVDLD 237
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS ++ IE GDD V +KSG G+ P+ G+T+ + GIA+GSET+
Sbjct: 238 SSEDIVIEHCLFDVGDDAVTLKSGSGADGLRINLPTRGVTVSHCKILASHGGIAIGSETA 297
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA-----GDV 183
GG+E+V I +K+ GRGG I+NIT+S++ M I I G +
Sbjct: 298 GGIEDVTVNDCVFEGTQRAIRLKSRRGRGGTIKNITLSNLTMTGCWCPIVIGQYFAPGVL 357
Query: 184 GDHPDDKFNPNALPV------VNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSN 233
D + A PV + + I V T ++ + I GL +P + + N
Sbjct: 358 PAERDTTLSETAQPVTPMTPRIENVRIAHVQATDIRATAAFIVGLPEAPIQRVTIEN 414
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 120/245 (48%), Gaps = 7/245 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 154 RPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSS 213
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G
Sbjct: 214 RFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGD 273
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +K+ GRGG + ++ + M I G D +
Sbjct: 274 VRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSE 333
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 334 PEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFD 388
Query: 249 CSDVS 253
SD+S
Sbjct: 389 ASDLS 393
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ I+ ++I + ++SPFW IHPVYC NV++R VTI + PN DG DP+S+
Sbjct: 196 RPSCIQPYGCSRVLIEGITVKDSPFWTIHPVYCDNVIVRGVTI--DSHFPNNDGCDPEST 253
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV IE+ TGDD +A+KSG D G G PS I IR S +G+ +GSE SGG
Sbjct: 254 TNVLIENCTFRTGDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHSECNGLCIGSEMSGG 313
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
+V +I + V I+ K+N RGG+IRN+ V + +E A+ I
Sbjct: 314 ASDVYMNNIEIGTVKNAIYFKSNRDRGGYIRNVVVDSITVERAKGAI 360
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 121/253 (47%), Gaps = 15/253 (5%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RPNL+ N + I++ V FQNSP WN+HP+ C ++ +R + + P + N D
Sbjct: 218 QSIKDFLRPNLLVLTNCKQILLEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWFAQNGD 277
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S NV IE S GDD + +KSG DE G G P+ + IR G V
Sbjct: 278 GVDVESCKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRNNVVYHAHGGFVV 337
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN----------- 172
GSE SGG +N+ + +GI KT GRGG + +I ++++ M +
Sbjct: 338 GSEMSGGAKNIWVYDCSFIGTDIGIRFKTTRGRGGVVEDIYINNINMIDIPGEAILFDMY 397
Query: 173 --ARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 228
A I +AG+ + P A P I IKDV +++ ++GL
Sbjct: 398 YAAVDPIVLAGEKREAIKTVVVPVTEATPQFKNIYIKDVVANGAEKAIFVRGLPEMNIKD 457
Query: 229 ICLSNINLQGVAG 241
I L N+ +Q G
Sbjct: 458 IYLENVTIQAKKG 470
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 122/243 (50%), Gaps = 15/243 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ +N +++++ +VIFQNSP WNIHP+ C NV+I V P+ + N D +D +
Sbjct: 228 FLRPVMVSLVNCKNVLLKDVIFQNSPAWNIHPLMCENVIIDGVLARNPSYAQNGDALDLE 287
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV + +S GDD + +KSG DE G G P + + T + G VGSE S
Sbjct: 288 SCKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVVVDGCTVFAGHGGFVVGSEMS 347
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---------GIKI 179
GGV N+L + VG+ K+ GRGG + NI + D+ M + + G K
Sbjct: 348 GGVRNILVKRCQFLGTDVGLRFKSKRGRGGIVENIFIHDISMTDIKTDAITFNMYYGGKS 407
Query: 180 AGDV---GDHPDDKFN---PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
++ GD+PD+ P+ I I+++ ++ GL P I L N
Sbjct: 408 VAEMLADGDNPDNVSKMPVTGETPIFRHIDIRNIVCYGAGRAMEFNGLPEMPIENINLEN 467
Query: 234 INL 236
+++
Sbjct: 468 VHI 470
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 126/243 (51%), Gaps = 24/243 (9%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN+I+F + R+I++ ++ P W IHPV C NV +R V ++ + N+DG+DP+ +
Sbjct: 220 RPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECT 277
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
S++ I T DD +AVKSG DE G G PS I IR S + G+AVGSE SGG
Sbjct: 278 SDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGRWGGVAVGSEMSGG 337
Query: 131 VENVLAEHINL--------YNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGI 177
V +V AE + YN + +KTN RGG +IR T + +
Sbjct: 338 VRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTT 397
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ AG G+ P V+ I I+D+ +++ ++GL + PFTG+ ++
Sbjct: 398 RYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIARCRFT 448
Query: 238 GVA 240
G+A
Sbjct: 449 GMA 451
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 154 RPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIRNPPDAPNGDGIDIDSS 213
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G
Sbjct: 214 RFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGD 273
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 274 VRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSD 333
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 334 PEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFD 388
Query: 249 CSDVS 253
SD+S
Sbjct: 389 ASDLS 393
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 126/243 (51%), Gaps = 24/243 (9%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN+I+F + R+I++ ++ P W IHPV C NV +R V ++ + N+DG+DP+ +
Sbjct: 205 RPNMIQFYDCRNILMQDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDPECT 262
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
S++ I T DD +AVKSG DE G G PS I IR S + G+AVGSE SGG
Sbjct: 263 SDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCVFSGRWGGVAVGSEMSGG 322
Query: 131 VENVLAEHINL--------YNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGI 177
V +V AE + YN + +KTN RGG +IR T + +
Sbjct: 323 VRDVFAEDCRINPVDFPGRYNPRHPVFIKTNKKRGGSITGVYIRRFTGRAIDRDCVYLTT 382
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ AG G+ P V+ I I+D+ +++ ++GL + PFTG+ ++
Sbjct: 383 RYAGQQGERP---------AVIRDIRIEDMVHDGARRAIHLEGLDSDPFTGVHIARCRFT 433
Query: 238 GVA 240
G+A
Sbjct: 434 GMA 436
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 154 RPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSS 213
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G
Sbjct: 214 RFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGD 273
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 274 VRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIAMRRVACPFVINGYYQTDIDSD 333
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 334 PEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFD 388
Query: 249 CSDVS 253
SD+S
Sbjct: 389 ASDLS 393
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 7/238 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+TRP LI F + + +++ V +NSP W I P Y +V+IR + +LAP +PNTD IDP
Sbjct: 159 YTRPRLIVFNHCKHVVLEGVTVENSPMWQIVPYYSDDVIIRNIHVLAPQHAPNTDAIDPF 218
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SSS+V IE + GDD +A+KSG + PS+ ITIR G++VGSE +
Sbjct: 219 SSSHVLIEHVVANVGDDDIAIKSG-EANSPGPDAPSTYITIRDCIFLHGH-GLSVGSEIA 276
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD-HP 187
GG +++LAE+I + GI VK N RG + ++ ++ M N + + I+ +P
Sbjct: 277 GGAQHILAENITMTGTDNGIRVKANRDRGNDVSDLVFKNIQMTNVKNALIISEFYPHIYP 336
Query: 188 DDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
NP + P + IT+++V T + +G I GL +P + L N+++ G
Sbjct: 337 PMPDNPAPITRLTPHFHNITVENVTATNSKNAGAIAGLPEAPIRDVVLKNVSIDAQKG 394
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 191 RPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSS 250
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G
Sbjct: 251 RFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGD 310
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 311 VRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDIDSD 370
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 371 PKPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFD 425
Query: 249 CSDVS 253
SD+S
Sbjct: 426 ASDLS 430
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 177 RPPLLQIHECENVTVSGVTLRNSPFWNTHVVYSEDVTIHDVSIRNPPDAPNGDGIDIDSS 236
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V + D++I GDD + +KSG DE G G P+ + + T G+ VGSET+G
Sbjct: 237 RFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCTVEHGHGGVVVGSETAGD 296
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +K+ GRGG + ++ + M + G D
Sbjct: 297 VRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVLNGYYQTDIDSD 356
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 357 PKPVDEATPNVRNVNFHHITAEEVESAAFLAGLPERRFEGISFTDVDIDA-----TRPFD 411
Query: 249 CSDVS 253
+D+S
Sbjct: 412 ATDLS 416
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 127/240 (52%), Gaps = 4/240 (1%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
W +R F RP I+ M +++ I + +NSPFW ++P +C NV I VTI P SPN
Sbjct: 172 WVERG--FLRPPFIQPMYCKNVRIDGITIKNSPFWTVNPEFCDNVTIDGVTINNPP-SPN 228
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGI+P+S SNV I + +IS GDD + +KSG D G P+ TI T S G+
Sbjct: 229 TDGINPESCSNVHISNCHISVGDDCITIKSGKDRSGRKEARPAENYTITNCTMLSGHGGV 288
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
+GSE SG V+ ++ + GI +KT GRGG + +I VS++ M+N ++ +
Sbjct: 289 VIGSEMSGDVKKIVISNCIFDGTDRGIRIKTARGRGGVVEDIQVSNIVMKNIKQQAIVLD 348
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D + P + I + ++ + +Q+G + GL+ P + SN+ ++ G
Sbjct: 349 MQYAKTDREPVSERTPRFSNIHLSNITA-QGEQAGYLNGLEEMPIENVSFSNMVMETKTG 407
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ +S V +NSPFWN H VY +V I V+I P D+PN DGID DSS
Sbjct: 191 RPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDSS 250
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G
Sbjct: 251 RFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGD 310
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 311 VRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDIDSD 370
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 371 PKPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDA-----TRPFD 425
Query: 249 CSDVS 253
SD+S
Sbjct: 426 ASDLS 430
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 122/279 (43%), Gaps = 22/279 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPNL+ + +++ FQNSP WN+HP C +V +R VT+ P N DG+D D
Sbjct: 204 YLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGLDLD 263
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +ED GDD + +KSG DE G A G P I IR G +GSE S
Sbjct: 264 SCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCRVYHGHGGFVIGSEMS 323
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GGV + E +G+ K+ GRGG + +I + + M + ++
Sbjct: 324 GGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLFYEGKE 383
Query: 176 GIKIAGDVGDHPDDKFNPNAL--PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
G +AG + P ++ P+ GITI+DV + + LI GL P G+ + N
Sbjct: 384 GSGVAG-------ENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLVVEN 436
Query: 234 INLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 272
G + + V+ P L +Q
Sbjct: 437 FTASAKRGGVCTNAQNLTLKDVTLHVEQGPVVSLRHAQH 475
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 121/238 (50%), Gaps = 9/238 (3%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
R F RP L++ +S I++ + ++SPFW +HP+Y N+V + ++I P ++PNTDG
Sbjct: 155 RQSQFLRPPLVQVKDSSDILLEGITLEDSPFWTLHPLYSRNLVFKNLSIKNPKNAPNTDG 214
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
ID DS NV IE I GDD +A+KSG GI G P+ + I + T + G +G
Sbjct: 215 IDLDSCENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCTVRNAHGGAVIG 274
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN--ARKGIKIAGD 182
SET+ G+ NV + GI +KT GRGG I +++ + M I +
Sbjct: 275 SETAAGIHNVEVSNCLFDGTDRGIRIKTRRGRGGKISHLSFLGLKMVKNLCPLTINLYYR 334
Query: 183 VGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSN 233
G ++ F+ LPV V+ I I D S I GL SP TG+C+ +
Sbjct: 335 CGSFSNEDFSLEKLPVCPETPSVSDIRITDCEAVGCLSSIAFIVGLPESPITGLCIED 392
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 126/282 (44%), Gaps = 28/282 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPNL+ + +++ FQNSP WN+HP C +V +R VT+ P N DG+D D
Sbjct: 204 YLRPNLLSLRRCKYVLLEGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQNGDGLDLD 263
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +ED GDD + +KSG DE G G P I IR G +GSE S
Sbjct: 264 SCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCRVYHGHGGFVIGSEMS 323
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GGV + E +G+ K+ GRGG + +I + + M + ++
Sbjct: 324 GGVRRLRVEDCTFMGTDIGLRFKSTRGRGGLVEDIEIERIRMNSIVGEAISFHLFYEGKE 383
Query: 176 GIKIAGDVGDHPDDKFNPNAL--PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
G +AG + P ++ P+ GITI+DV + + LI GL P G+ + N
Sbjct: 384 GSGVAG-------ENIVPVSVETPIFRGITIRDVQCAGAETALLINGLPEMPLDGLVVEN 436
Query: 234 INL---QGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQ 272
+GV + L DV+ V+ P L +Q
Sbjct: 437 FTASAKRGVVCTNAQNLTLKDVT---LHVEQGPVVSLRHAQH 475
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ ++ +S V +NSPFWN H VY +V + V+I P D+PN DGID DSS
Sbjct: 147 RPPLLQIDGCENVTVSGVTLRNSPFWNTHVVYSEDVTVHDVSIQNPPDAPNGDGIDIDSS 206
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V + D++I GDD + +KSG DE G G P+ + + T G+ +GSET+G
Sbjct: 207 RFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCTVEHGHGGVVIGSETAGD 266
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V +V + + GI +K+ GRGG + ++ + M I G D
Sbjct: 267 VRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDIDSD 326
Query: 191 FNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
P A P V + + +V+ + + GL F GI +++++ + P
Sbjct: 327 PEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPERRFEGISFTDVDIDA-----TRPFD 381
Query: 249 CSDVS 253
SD+S
Sbjct: 382 ASDLS 386
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 122/241 (50%), Gaps = 15/241 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L+ NS+ ++ +FQNSP WNIHP+ ++++R VT+ P S N DG+D +
Sbjct: 231 FLRPVLVSIQNSKRVMFDGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQNGDGLDVE 290
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV +E+S GDD + +KSG D+ G G P I ++ G+ VGSE S
Sbjct: 291 SCKNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKNNIVYHGHGGVTVGSEMS 350
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GGV+N+ + + VG+ K+N GRGG + NI +SD+YM + +
Sbjct: 351 GGVKNLHVSNCSFMGTDVGLRFKSNRGRGGVVENIFISDIYMTDIPSQAISFDLYYGGKS 410
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ + G+ K P P I+IK+V QQ+ +QGL I ++N
Sbjct: 411 IAETLAEGGNTVSSKKVPVDEKTPQFKNISIKNVTIAGAQQAVFLQGLPEMNLENIEITN 470
Query: 234 I 234
+
Sbjct: 471 L 471
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 120/262 (45%), Gaps = 18/262 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN++ +++ + FQNSP W IHP+ C ++ +R V + P N D +D +
Sbjct: 446 FLRPNMVSLSRCTQVLLEGITFQNSPAWTIHPLLCEHITLRDVIVRNPWYGQNNDALDLE 505
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N +E TGDD + +KSG D G G P+ I +R T G +GSE S
Sbjct: 506 SCRNGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCTVFHGHGGFVIGSEMS 565
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GGV N+ N VG+ KT GRGG + NI V+D+ M N A+
Sbjct: 566 GGVRNLFVSDCNFLGTDVGLRFKTARGRGGIVENIYVTDINMTNIPGEAILFDMYYMAKD 625
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ + G+ P+ K P P IK++ + LI+GL P I + N
Sbjct: 626 PVSLNGEKNVLPEMKAEPLGEGTPQFRNFHIKNIVCQGAETGILIRGLPEMPIKNISIEN 685
Query: 234 INL---QGVAGPTSPPLKCSDV 252
N+ QG+ S ++ ++
Sbjct: 686 ANITCNQGLVCVESENIRLKNI 707
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 124/255 (48%), Gaps = 15/255 (5%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ Q F RPNL+ + +++ V FQNSP W +HP+ N+ +R V + P + N
Sbjct: 207 FYQSVKDFFRPNLVVLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQN 266
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
DGID +S SNV IE+S GDD + +KSG D G P+ + IR T + G
Sbjct: 267 GDGIDLESCSNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCTVYAAHGGF 326
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN--------- 172
VGSE SGGV NV + +G+ KT GRGG + NI + D++M++
Sbjct: 327 VVGSEMSGGVNNVYVSNCTFIGSDIGLRFKTTRGRGGIVENIFIKDIFMKDIPGDAVLFD 386
Query: 173 ----ARKGIKIAGDVGDHPD-DKFNPN-ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
A+ I +AG+ + P +K + P I I +++ Q++ ++GL
Sbjct: 387 MYYMAKDPIALAGEKRELPKVEKLAVDETTPQFRNIQISNIYVNGAQRAVFLRGLPEMAV 446
Query: 227 TGICLSNINLQGVAG 241
I +SN Q G
Sbjct: 447 KNISISNAVFQSKQG 461
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 124/235 (52%), Gaps = 9/235 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN++EF+N R ++I NV ++SP + +HPV C NV +R ++IL + PN DGIDP+
Sbjct: 169 RPNMLEFINCRDVLIENVTLRDSPAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEYC 226
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IED + TGDD + +KSG D+ G A P+ + +RR+ GI +GSE S G
Sbjct: 227 RNVLIEDCLVDTGDDCICLKSGRDQDGWAENRPTENVIVRRIRTRRGHGGIVLGSELSSG 286
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDD 189
+ NVL E + GI +K+ GRGGF+ NI + ++ M + + I I D G
Sbjct: 287 IRNVLVEDCDFSGTERGIRIKSAPGRGGFVENIHMRNIRMSDIIDEAIIIHMDYGSVAKG 346
Query: 190 KF------NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ N + + I I+DV ++ I G P I L N+ L
Sbjct: 347 QVGSAFQSNTPSPTRMRNILIEDVTCASAGKALDITGDAALPPESITLRNLRLHA 401
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 4 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 121 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V +V + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAV- 379
Query: 179 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 220
+ ++ +K + N PVV I + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRNFPPVVRHIYLDNVTSEKSKYGVLITG 421
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 10/235 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP IE ++ I V +SPFW IHP++CSNV++R VT+ + + N DG DP+S
Sbjct: 199 RPGFIEPFGCANVRIEGVTIIDSPFWVIHPIFCSNVIVRNVTV--DSHNYNNDGCDPESC 256
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE STGDD +A+KSG D G P+ + IR + S +G+ +GSE +GG
Sbjct: 257 RNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKINGVCIGSEIAGG 316
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V N+ E+I + I+ K+N+ RG +I+++ V +V + R + + P+ K
Sbjct: 317 VRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTAL-----IRFEPNYK 371
Query: 191 FNPNAL--PVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 242
+A + N I++V + + G+ + G P I L N+ + V P
Sbjct: 372 GERSAFHPTLFNSFLIENVTCKQSNECGIYMAGFAERPLQNIVLKNVTIGKVPTP 426
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 120/230 (52%), Gaps = 3/230 (1%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + R + I V NSPFW ++P +C NVV+ VTI SPNTDGI+P+
Sbjct: 190 FFRPPFIQPVRCRRVRIEGVKIINSPFWTVNPEFCDNVVVTGVTI-HNVPSPNTDGINPE 248
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 249 SCRNVHISDCHISVGDDCITLKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 308
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHP 187
G V V + GI +K+ GRGG + +I VS++ M N R+ + + + P
Sbjct: 309 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIIMSNIKREAVVLNLKYSEMP 368
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ + P+ I+I + V+ I GL+ +P T I L +IN++
Sbjct: 369 VEPMSERT-PLFRDISISGLTAVGVKTPVKIVGLEEAPVTDIILRDINVK 417
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 119/230 (51%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV+I+ +TI A SPNTDG++P+
Sbjct: 189 FFRPLFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVIIKGITI-DNAPSPNTDGVNPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 91/142 (64%), Gaps = 15/142 (10%)
Query: 1 MWRQR----TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
+W QR L +TRP LIE M S I ISN+ NSP WN+HPVY N++I+ +TILAP
Sbjct: 170 LWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAP 229
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG-HPSSGITI------ 109
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAY H + +
Sbjct: 230 VRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYDWHRERRLYMVAENVS 289
Query: 110 --RRVTG--SSPFSGIAVGSET 127
R+ G S PF+GI + + T
Sbjct: 290 MAARLEGIPSDPFTGICISNVT 311
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 212 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS- 270
V + ++G+ + PFTGIC+SN+ + A P C+DV G + V P PCS L
Sbjct: 288 VSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQG 347
Query: 271 -QQTGAC 276
++T C
Sbjct: 348 PEKTSLC 354
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 118/238 (49%), Gaps = 9/238 (3%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
R F RP L++ ++S + + V SPFW +HPV+ S + R V I+ PAD+PNTDG
Sbjct: 155 RQCQFLRPPLLQILDSTRVTVEGVTLTGSPFWTLHPVFSSGLTFRDVKIINPADAPNTDG 214
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
ID DS +V + + GDD +A+KSG GIA G P+ + + T S GI +G
Sbjct: 215 IDIDSCQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNVRVSGCTVRSAHGGIVIG 274
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN--ARKGIKIAGD 182
SET+ G+ ++AE GI +KT GRGG I ++ + M N I +
Sbjct: 275 SETAAGISGLVAEDCLFDGTDRGIRIKTRRGRGGAISDLRFERLTMRNNLCPLAINMYYR 334
Query: 183 VGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSN 233
G F+ + P+ + I ++D T Q S G I GL P T + + +
Sbjct: 335 CGTTEGSLFSLSPEPIDDTTPSIGNILVRDCVATGSQASAGFIVGLPERPITELVVED 392
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 4 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 121 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V +V + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAV- 379
Query: 179 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 220
+ ++ +K + N PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRNFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 128/250 (51%), Gaps = 12/250 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV ++ VTI SPNTDGI+P+
Sbjct: 191 FFRPPFIQPVRCKDVKIEGVKIVNSPFWTVNPEFCENVKVKGVTI-HNVPSPNTDGINPE 249
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G G P ITI S G+ +GSE S
Sbjct: 250 SCRNVHISDCHISVGDDCITIKSGRDAQGRRLGVPCENITITNCIMLSGHGGVVIGSEMS 309
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDV 183
GGV V + GI +K+ GRGG + +I VS++ M N ++ +K +G
Sbjct: 310 GGVRKVTISNCIFDGTDRGIRLKSTRGRGGVVEDIRVSNIVMRNIKQEAVVLNLKYSGMP 369
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
+ ++ P+ I I + T V+ I GL+ +P + I L +I++QG AG
Sbjct: 370 AEPKSER-----TPLFRNIHISGMTVTDVKTPVKIVGLEEAPISEIVLRDIHVQG-AGEE 423
Query: 244 SPPLKCSDVS 253
C ++
Sbjct: 424 CVFEDCERIT 433
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 119/231 (51%), Gaps = 3/231 (1%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + I I V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 189 FFRPPFIQPIRCKEIKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPSPNTDGINPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHP 187
G V V + GI +K+ GRGG + +I VS++ M N R+ + + P
Sbjct: 308 GSVRKVTISNCIFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKREAVVLNLKYSKMP 367
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 368 AEP-KSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 122/243 (50%), Gaps = 10/243 (4%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
+Q F RP I+ M ++++I + +NSPFW ++P + NV I VTI P SPNT
Sbjct: 179 KQMKRGFLRPPFIQTMFCKNVLIDGITIRNSPFWTVNPEFSENVKIHAVTINNP-HSPNT 237
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DGI+P+S NV I D +IS GDD + +KSG DE G P+ I T S G+
Sbjct: 238 DGINPESCKNVHISDCHISVGDDCITIKSGKDEPGRRMAIPAENYVITNCTMLSGHGGVV 297
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD 182
+GSE SG V + + GI +KT GRGG + I VS++ M K IK
Sbjct: 298 IGSEMSGDVRKITISNCVFDGTDRGIRIKTARGRGGIVEEIRVSNIIM----KDIKQQAI 353
Query: 183 VGDHPDDKFN----PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
V D K N + P I ++ G +V Q+ + GL+ P I ++IN++
Sbjct: 354 VLDMQYAKTNVQPVSDRTPKFRNIHFSNITG-QVNQAAYLNGLEEMPIENITFNDINMEA 412
Query: 239 VAG 241
G
Sbjct: 413 KTG 415
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 119/230 (51%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C+NV I+ +TI A SPNTDG++P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCNNVTIKGITI-DNAPSPNTDGVNPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 117/230 (50%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS++ M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 368 AEAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 113/226 (50%), Gaps = 1/226 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + R++ I + NSPFW ++P +C NV ++ VTI SPNTDGI+P+
Sbjct: 188 FLRPPFIQLLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPSPNTDGINPE 246
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S SNV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 247 SCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHGGVVIGSEMS 306
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV+ V + GI +K+ GRGG + +I VS+V M + ++ +
Sbjct: 307 GGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQMK 366
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
+ PV I + + Q + GL +P GI +I
Sbjct: 367 MEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDI 412
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 20/249 (8%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
++ L RP LI + + + V +NSP ++ P +C +VV+ VTI +PAD+PNTD
Sbjct: 202 EKPLYVPRPFLITLRDCARVHLQGVTLRNSPMFHFVPHHCHDVVVEDVTIFSPADAPNTD 261
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITI---RRVTGSSPFSG 120
GIDP +S +V I I TGDD +AVK G G+A P+ +T+ + + G G
Sbjct: 262 GIDPANSRDVLIRRCTIDTGDDNIAVKGG----GVA-NEPTENVTVTDCKFLHG----HG 312
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI- 179
+++GSET GV N L + N G + +K++ RGG + N+ D+ M+N I I
Sbjct: 313 VSIGSETEAGVRNFLVQRCAFENTGTALRIKSDRTRGGVVENVLYRDITMKNVETAITIF 372
Query: 180 ----AGDVGDHPDDKFNPNALPVVNGITIKDV--WGTKVQQSGLIQGLKNSPFTGICLSN 233
HP+ P+V IT + + GT +++G + GL SP + + +
Sbjct: 373 LFYDDKKAAAHPELAPVTKQTPMVRNITFQKIVCHGT-TRKAGELVGLPESPISDVVFDD 431
Query: 234 INLQGVAGP 242
+++ G A P
Sbjct: 432 VHIDGAAAP 440
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 199 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 257
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 258 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 317
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 318 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 377
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 378 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQG 427
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 198 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 256
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 257 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 316
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 317 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 376
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 377 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQG 426
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 16/262 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP IE ++ I V +SPFW IHP++C+NV++R VT+ + + N DG DP+S
Sbjct: 199 RPGFIEPFGCANVRIEGVTIMDSPFWVIHPIFCNNVIVRNVTV--DSHNYNNDGCDPESC 256
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE STGDD +A+KSG D G P+ + IR + S +G+ +GSE +GG
Sbjct: 257 RNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKINGVCIGSEIAGG 316
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V N+ E+I + I+ K+N+ RG +I+++ V +V + R + + P+ K
Sbjct: 317 VRNIFIENITIPKSSNAIYFKSNLDRGAYIQDVYVRNVQADTVRTAL-----IRFEPNYK 371
Query: 191 FNPNAL--PVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP----- 242
+A + + I++V + + G+ + G P I L N+ + V P
Sbjct: 372 GERSAFHPTLFDSFLIENVTCKQSNECGIYMAGFAERPLQNIVLKNVTIGKVPTPYCFQN 431
Query: 243 -TSPPLKCSDVSGSAYQVKPWP 263
+ + V+G KP P
Sbjct: 432 GENIRFQSVKVNGKKLDEKPTP 453
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 164 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 222
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 223 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 282
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 283 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 342
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 343 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQG 392
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 78/100 (78%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
++Q+ L TRP LIE M S + ISN+ +SP WN+HPVYCS+V+I+ +TILAP D PN
Sbjct: 174 FKQKKLVDTRPYLIEIMFSDQVQISNLTLIDSPSWNVHPVYCSDVIIQGMTILAPVDVPN 233
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 101
TDGI+PDS +NV IED YI +GDD +AVKSGWD+YGI YG
Sbjct: 234 TDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYG 273
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 92/151 (60%), Gaps = 8/151 (5%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R L TRP LIE M S + ISN+I +SP WN+HP Y SNV+I+++TI+AP SPN
Sbjct: 426 FRADKLKDTRPYLIEIMYSDQVQISNLILIDSPSWNVHPTYSSNVIIQWLTIIAPVGSPN 485
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS----- 116
TDGI+PDSS NV IED +I +GDD +AVKSGWD+YGI G + VT S+
Sbjct: 486 TDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGKGRIYMVAENVTYSARLDGI 545
Query: 117 ---PFSGIAVGSETSGGVENVLAEHINLYNV 144
PF+GI + + G E N NV
Sbjct: 546 SGDPFTGICISNVKIGLTEKPKKLQWNCTNV 576
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 212 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQ 271
V S + G+ PFTGIC+SN+ + P C++V G + QV P C L S+
Sbjct: 536 VTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVTPPSCDLLHPSK 595
Query: 272 QTGAC 276
+ C
Sbjct: 596 KVFNC 600
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPNL+ N + I++ V FQNSP WN+HP+ C ++ +R V + P + N DGID +
Sbjct: 236 FFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV +E+S GDD + +KSG DE G P+ + IR G +GSE S
Sbjct: 296 SCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHGGFVIGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV--------------SDVYMENAR 174
GG N+ + +G+ KT GRGG + NI + +D+Y E A+
Sbjct: 356 GGARNIWVYDCSFIGTDIGLRFKTTRGRGGIVENIFIDRISMFDIPGEAILADMYYE-AK 414
Query: 175 KGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 232
I + GD + P A P IKDV ++ +GL G+ L
Sbjct: 415 DPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLE 474
Query: 233 NINLQGVAG 241
NI+++ G
Sbjct: 475 NISIKSKKG 483
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 18/239 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++F + I V NSPFW +HPV C +VV+R VT + PN DG DP+
Sbjct: 221 FLRPAFVQFYACNQVKIEGVTLVNSPFWLLHPVLCESVVVRGVT--CRSHGPNNDGCDPE 278
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE TGDD +A+KSG +E G G + +R G+ +GSE S
Sbjct: 279 SCKNVLIEQCVFDTGDDCIALKSGRNEDGRRVGVAVENVVVRHCEMRDGHGGLVLGSEIS 338
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GG N+ EH +N ++ + KTN RGG I + V V+++ A++ + + G
Sbjct: 339 GGARNIFMEHCSMNSPHLERALRFKTNARRGGVIEKVRVRHVHIQQAQEALVVNFHYEEG 398
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
+ G+H +P V I ++D+ +V++ ++G ++P I L VA
Sbjct: 399 EAGEH---------MPTVRDILVEDLRCDQVERVFHLRGFAHNPVGAITLRRAQFGRVA 448
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 192 FFRPPFIHPIRCKNVRVEGVTIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPE 250
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMS 310
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDV 183
GGV+ V + GI +K+ GRGG + +I VS++ M N +K +K +
Sbjct: 311 GGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 371 AEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPNL NS+ I++ V FQNSP W +HP+ ++V+R V + P + N DGID +
Sbjct: 236 FYRPNLFVIANSKRILLEGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYAQNGDGIDIE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE+S GDD + +KSG DE G P+ + +R G +GSE S
Sbjct: 296 SCKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRNNVVYHAHGGFVIGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GG +N+ + + +G+ KT GRGG + N+ +++ YM++ A+
Sbjct: 356 GGAKNLYVYNNSFIGTDIGLRFKTTRGRGGIVENVYIANSYMKDIPGDAILFDMYYEAKD 415
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ +AG+ P +F P A P IK+V + ++G+ I L +
Sbjct: 416 PVPLAGEKRPAPVAEFKPVTEATPQFKNFYIKNVVCNGADKGLFVRGIPEMNVQNIYLED 475
Query: 234 INLQGVAG 241
+ L+ G
Sbjct: 476 LTLEAKTG 483
>gi|238024144|ref|YP_002908376.1| glycoside hydrolase [Burkholderia glumae BGR1]
gi|237878809|gb|ACR31141.1| Glycoside hydrolase [Burkholderia glumae BGR1]
Length = 673
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++EF+ ++++ N QN+PFW HP C+NVVIR V +A + PN DG DPD
Sbjct: 341 FLRPCMVEFIGCTNVLMENYHTQNTPFWQHHPTDCTNVVIRGV--MADSIGPNNDGFDPD 398
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ +NV + +TGDD +A+KSG D EYG A H ++ T +S GI +GS
Sbjct: 399 ACNNVLCDGMVFNTGDDCIAIKSGKDLDTEYGAAQNH-----VVQNCTMNSGHGGITLGS 453
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GG+ENV A ++ + N + + I +KTN+ RGGF+RN V+ V + N G+
Sbjct: 454 EMGGGIENVYARNLTMLNQFWATNSLNIAIRIKTNMNRGGFVRNFYVNGVTLPN---GVS 510
Query: 179 IAG 181
+ G
Sbjct: 511 LTG 513
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 18/237 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ ++F R++++ +V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 185 YLRPSFVQFYRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 242
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 126
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 243 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 302
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 181
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 303 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 362
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 363 EEGEY---------LPVVRSVFVKNLKATGGKYALRIEGLENDYVKDILISDTIMEG 410
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 85/235 (36%), Positives = 125/235 (53%), Gaps = 12/235 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI F+ S +I+I +V SPFW IHP+ C N+ + V I + PN DG DP++
Sbjct: 211 RPQLINFVRSENILIKDVTLLRSPFWVIHPLLCKNITVDGVQIWN--EGPNGDGCDPEAC 268
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I+++ TGDD +A+KSG + G +G PS I IR G+ +GSE SGG
Sbjct: 269 ENVIIQNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCKMEDGHGGVVIGSEISGG 328
Query: 131 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 187
ENV AE +++ N+ + +KTN RGG I+NI + +V + ++ + KI D ++
Sbjct: 329 CENVYAENCYMDSPNLERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDYENNE 388
Query: 188 D--DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 239
D F P V + +++V K + L+ GL N I L N GV
Sbjct: 389 DCYRGFE----PTVRNVNMENVTCEKSEYGVLMIGLDNVDNIYDINLKNCTFNGV 439
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 125/237 (52%), Gaps = 18/237 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ ++F R++++ +V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 185 YLRPSFVQFYRCRNVLVEDVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 242
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 126
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 243 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 302
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 181
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 303 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 362
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 363 EEGEY---------LPVVRSVFVKNLKATGGKYALRIEGLENDYVKDIMISDTIMEG 410
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 123/239 (51%), Gaps = 12/239 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP LI+F ++ + + QNSPFW IH VYC+ V I VT+ PA++ NTD +D D
Sbjct: 155 FLRPPLIQFWKCTAVKLKGITVQNSPFWTIHFVYCTQVTIDGVTVRNPANAINTDALDID 214
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS+NV + +S GDD + +KSG G+ P++ + ++ T + GIA+GSET+
Sbjct: 215 SSTNVAVSNSLFDVGDDAITLKSGSGPDGLRVNKPTAHVNVKDCTILASHGGIAIGSETA 274
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA-----GDV 183
GG+ +V E GI +K+ GRGG I+ IT+ + M++ I + G +
Sbjct: 275 GGINDVNVEKCTFSGTQRGIRLKSRRGRGGTIKGITLRHLEMDHCWCPIVLGMYFAPGVL 334
Query: 184 GDHPDDKFNPNALPV------VNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNIN 235
D + +A PV + I I+DV V+ + I GL SP + +
Sbjct: 335 PQEEDYVLSKSAQPVEATTPHIRNIRIEDVRADNVRSTAAFIVGLPESPIENVSIDQFE 393
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 91/140 (65%)
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGG+ ++ H+ +++ GI KT+ GRGG+I ++ +S+V MEN GI+ G+ HP
Sbjct: 2 SGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTHP 61
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 247
DD F+P+ LP ++ +T+K++ GT + +G++ G++ +PFT ICLSN+N AG
Sbjct: 62 DDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSSW 121
Query: 248 KCSDVSGSAYQVKPWPCSEL 267
CSDVSG + V P PC+EL
Sbjct: 122 SCSDVSGYSEAVFPEPCTEL 141
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 192 FFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPE 250
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMS 310
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDV 183
GGV+ V + GI +K+ GRGG + +I VS++ M N +K +K +
Sbjct: 311 GGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 371 AEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 192 FFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPE 250
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMS 310
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDV 183
GGV+ V + GI +K+ GRGG + +I VS++ M N +K +K +
Sbjct: 311 GGVKKVTISNCIFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMRNIKKEAIVLNLKYSKMP 370
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 371 AEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 192 FFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPE 250
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMS 310
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDV 183
GGV+ V + GI +K+ GRGG + +I VS++ M N +K +K +
Sbjct: 311 GGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 371 AEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R L + RP LI F R + I +V +SP W ++P+ C NV I V+IL PADSPNT
Sbjct: 124 RPEELHYPRPKLISFDRCRRVTIRDVSLVDSPSWTVNPIRCHNVTIDNVSILNPADSPNT 183
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DGI+P+S SNV I + +I GDD +A+K+G +E A P ITI T G+
Sbjct: 184 DGINPESCSNVRISNCHIDVGDDCIAIKAGTEE--TAERVPCENITITNCTMIHGHGGVV 241
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
+GSE SG + NV + + GI +K+ GRGG + +I VS++ MEN
Sbjct: 242 IGSEMSGNIRNVTISNCVFQHTDRGIRLKSRRGRGGIVEDIRVSNLVMEN 291
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 4 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 121 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V +V + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNVEVGECREAV- 379
Query: 179 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 220
+ ++ +K + + PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 192 FFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPE 250
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMS 310
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDV 183
GGV+ V + GI +K+ GRGG + +I VS++ M N +K +K +
Sbjct: 311 GGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 371 AEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 308 GSVCKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I + +++ + V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 192 FFRPPFIHPIRCKNVRVEGVKIINSPFWTVNPEFCDNVTIKGITI-HNVPSPNTDGINPE 250
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 251 SCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGHGGVVIGSEMS 310
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-----GIKIAGDV 183
GGV+ V + GI +K+ GRGG + +I VS++ M N +K +K +
Sbjct: 311 GGVKKVTISNCVFDGTDRGIRLKSTRGRGGIVEDIRVSNIVMSNIKKEAIVLNLKYSKMP 370
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ D+ V+G+T++D V ++ GL +P TGI + ++ +Q
Sbjct: 371 AEPKSDRTPEFRNIYVSGVTVRD-----VNTPIMVVGLPEAPITGIVMRDVYIQ 419
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L++ + S+ + + +NSPFWN H VYC NV I V P D+PN DG+D D
Sbjct: 159 FLRPPLLQMYDCDSVTLDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLD 218
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S SNV + + + GDD +A KSG +E G P+ + + T + GI +GSE S
Sbjct: 219 SCSNVRVSNCHFDVGDDCLAFKSGINEDGRRVARPTENVAVTNCTMKNGHGGIVMGSENS 278
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------D 182
GG+ N+ + GI +KTN RG +IR+I + ++YM+ + I D
Sbjct: 279 GGIRNIAVSNCVFIGTDRGIRLKTNRARGSYIRDILIDNIYMDGVLCPLAINSFYRHGLD 338
Query: 183 VGDHPDDKFNP----NALPVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINLQ 237
D ++ +P P + I I +V + +G I GL I L ++ ++
Sbjct: 339 KSDSLINELSPIEISEKTPEIEYIHISNVTARNCRSAAGFIYGLPEKYVKDIILRHVLIE 398
Query: 238 GVAGP 242
P
Sbjct: 399 MTINP 403
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 117/249 (46%), Gaps = 17/249 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPNL+ N + I++ V FQNSP WN+HP+ C ++ +R V + P + N DGID +
Sbjct: 243 FFRPNLLVLNNCKQILLEGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIE 302
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV +E+S GDD + +KSG DE G P+ + IR G +GSE S
Sbjct: 303 SCKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRNNVVYHAHGGFVIGSEMS 362
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS--------------DVYMENAR 174
GG N+ + +G+ KT GRGG + NI + D+Y E A+
Sbjct: 363 GGARNIWVYDCSFIGTDIGLRFKTTRGRGGVVENIFIDRISMFDIPGEAILVDMYYE-AK 421
Query: 175 KGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 232
I + GD + P A P IKDV ++ +GL G+ L
Sbjct: 422 DPIPLIGDKQEAVKAVTLPVTEATPQFRNFKIKDVVVNGADKAIFFRGLPEMNIKGMSLE 481
Query: 233 NINLQGVAG 241
NI+++ G
Sbjct: 482 NISIKSKKG 490
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS++ M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T V+ I GL+ +P I L +I++QG
Sbjct: 368 AEAKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPIFDIVLRDIHIQG 417
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 4 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 121 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V ++ + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAV- 379
Query: 179 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 220
+ ++ +K + + PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 4 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 121 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V ++ + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERVIRIKTNNCRGGVIENIYVRNIEVGECREAV- 379
Query: 179 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 220
+ ++ +K + + PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 125/237 (52%), Gaps = 7/237 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ +++I V + SPFW +HPV C NV IR + I + PN DGIDP+
Sbjct: 212 YLRPPFIQPYRCTNVLIEGVSLRRSPFWQVHPVLCRNVTIRRLDI--NSHGPNNDGIDPE 269
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +V IED + STGDD +A+ SG +E G G P + IR + G+ +GS+ S
Sbjct: 270 SCDHVLIEDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCRMADGHGGLTIGSQIS 329
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
G V NV AE+ L ++ I K N RGG + + ++ + R+ + V +
Sbjct: 330 GHVRNVFAENCRLDSPDLDHAIRFKNNALRGGIVERVRYRNLEVGQVRRAVVT---VDFN 386
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
++ N PV+ + I++V + +++ +QGL +P I + + + +GVA P+
Sbjct: 387 YEEGANGRFKPVLRDVLIENVRSGRSRRAVDLQGLPGAPARDIRIVDCDFRGVAEPS 443
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 99/168 (58%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
R + F RP+L+E + ++ + + ++SPFW +HP+Y N+ +R + I P +PNTDG
Sbjct: 157 REIQFLRPSLLEISFAENVSVEGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDG 216
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
ID DS NV IED ++S GDD + +KSG GI P+ + IR T + GI +G
Sbjct: 217 IDVDSCENVVIEDCFVSVGDDGICIKSGSGPDGIRCAKPTVNVEIRNCTVRNAHGGIVIG 276
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
SET+ G+ ++ A +L GI +K+ GRGG I +I + D+ M N
Sbjct: 277 SETAAGMSHIHAVGCDLSGTDRGIRIKSRRGRGGDIFDIELRDMVMNN 324
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 116/252 (46%), Gaps = 15/252 (5%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
R + RP L+ + +++ V FQNSPFWN+HP C ++++ V + P +S N DG
Sbjct: 208 RLKDYVRPELMHLYHCERVLLQGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQNGDG 267
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG 124
+D +S NV + S GDD V +KSG +E G G P+ + + T G VG
Sbjct: 268 LDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCTVFHGHGGFVVG 327
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-------------E 171
SE SGGV ++L + N G+ K+N RGG + +I + +VYM
Sbjct: 328 SEMSGGVHSILVRNCKFLNTDTGLRFKSNRQRGGHVSDIYIQNVYMCGIAAEPILFDMYY 387
Query: 172 NARKGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 229
+ ++ D + P P + I I DV + ++ L GL + I
Sbjct: 388 QGKSAVEAMEDALKGSMETIPPVTEKTPKFDHIHISDVHCYQAGRALLFDGLPEQNISDI 447
Query: 230 CLSNINLQGVAG 241
L N+ + V G
Sbjct: 448 TLRNVTIHAVEG 459
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 10/236 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F +++ V SPFW +HP+ NV++R V + PN DG DP+S
Sbjct: 711 RPPFIQFYRCNRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKF--DSHGPNNDGCDPESC 768
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE + GDD VA+KSG + G + PS I +R +G+AVGSE SG
Sbjct: 769 ENVLIESCDFNNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCIMRDGHAGVAVGSEISGS 828
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 187
+V + + + + +K+N RGG + D+ + ++ + ++
Sbjct: 829 CYDVWVRDCVMDSPSMDRPLRIKSNALRGGVVDGFYARDIRIGECKQAVLRLELQYERVQ 888
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGP 242
+N PV I +++V K LI+G ++ + L N L+G+ P
Sbjct: 889 SGPYN----PVFRNIYLENVTCKKSSYGILIEGFEDRISIFNVRLKNCRLKGIQTP 940
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 125/233 (53%), Gaps = 10/233 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ ++F R++++ V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 185 YLRPSFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 242
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 126
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 243 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 302
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNI-TVSDVYMENARKGIKIAGDVGD 185
SGGV NV+A + NV + +KTN RGG++ NI + +V M + + I+I +
Sbjct: 303 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAMNVSEEVIRI-----N 357
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
D LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 358 LRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 410
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 121/241 (50%), Gaps = 15/241 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L+ NS+ ++ +FQNSP WN+HP+ ++++R VT+ P S N DG+D +
Sbjct: 227 FLRPVLVSIQNSKRVMFDGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQNGDGLDVE 286
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE+S GDD + +KSG D+ G G P I ++ G+ VGSE S
Sbjct: 287 SCKNVIIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKNNIVYHGHGGVTVGSEMS 346
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NARKGIKI 179
GGV+N+ + VG+ K+ GRGG + NI +SDV+M + G K
Sbjct: 347 GGVKNLHVSNCTFMGTDVGLRFKSTRGRGGVVENIYISDVFMTDIPSQAISFDLYYGGKS 406
Query: 180 AGDVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ + + A+PV I+IK++ QQ+ +QGL I ++N
Sbjct: 407 IAETLAEGGNTVSTKAIPVNEETPQFKNISIKNITIKGAQQAVFLQGLPEMNLENIEITN 466
Query: 234 I 234
+
Sbjct: 467 L 467
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 5/254 (1%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+R F RP L++ N+ ++ I V F++SP W IH +Y +V + + +AP SPNTD
Sbjct: 182 ERYREFFRPQLLQLYNAENVTIEGVTFKDSPMWTIHILYSRHVTLINTSSIAPDYSPNTD 241
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+ DSSS+V + I GDD + +KSG DE G G PS I G +
Sbjct: 242 GVVVDSSSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCLMKRGHGGFVI 301
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGD 182
GSE SGGV NV + G+ +KT GRGG I N+ V+++YM N + + +
Sbjct: 302 GSEMSGGVRNVSIQDSVFDGTERGVRIKTTRGRGGLIENVYVNNIYMRNIIHEAVVVDMF 361
Query: 183 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL---QGV 239
P + + P + G+ I++ Q+ LI GL P I + N + +G+
Sbjct: 362 YEKRPVEPVSERT-PKIRGVVIRNTSCDGADQAVLINGLPEMPIEDIIIENTRITSNKGI 420
Query: 240 AGPTSPPLKCSDVS 253
+ ++ S+V
Sbjct: 421 HIENASSIRLSNVK 434
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 124/237 (52%), Gaps = 18/237 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ ++F R++++ V NSP W IHPV NV+IR + I + PN DGIDP+
Sbjct: 187 YLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEI--SSTGPNNDGIDPE 244
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 126
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 245 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 304
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 181
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 305 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 364
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 365 EEGEY---------LPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 412
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 120/222 (54%), Gaps = 8/222 (3%)
Query: 4 QRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+R + F RP LI +I+I NV +NSPFW IHP++C ++ +R V + + P
Sbjct: 203 KRQMTFEDGLRPQLINLYRCNTILIENVTLKNSPFWVIHPLFCESLTVRGVKV--SSHGP 260
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
N+DG DP+SS NV IE+ TGDD +A+KSG + G + PS I +R G
Sbjct: 261 NSDGCDPESSKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCEMKDGHGG 320
Query: 121 IAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
+ VGSE SGG +N+ E+ + N+ I +KTN RGG I NI V ++ + R+ +
Sbjct: 321 VVVGSEISGGYKNLFVENCKMDSPNLERIIRIKTNNCRGGVIENIYVRNIEVGECREAV- 379
Query: 179 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 220
+ ++ +K + + PVV + + +V K + LI G
Sbjct: 380 LKINLQYENREKCDRSFPPVVRHVYLDNVTSEKSKYGVLITG 421
>gi|374313032|ref|YP_005059462.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
gi|358755042|gb|AEU38432.1| Polygalacturonase [Granulicella mallensis MP5ACTX8]
Length = 420
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 125/240 (52%), Gaps = 16/240 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + F +S+ I + + QN+ FW I P Y ++V R + ILAP SPNTD IDP SS
Sbjct: 154 RPMGLVFDHSKHIRVEGITVQNAGFWQIVPYYADDLVFRNLKILAP-HSPNTDAIDPFSS 212
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SN+ I+ + S GDD VA+KSG PS ITI T + G+++GSE +GG
Sbjct: 213 SNIVIDHVFSSVGDDNVAIKSGAIN-SPGPDAPSKNITITDCTFENGH-GLSIGSEIAGG 270
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA---------G 181
V+NV AE I+ GI +K N RG + NI+ D+ M + + I I G
Sbjct: 271 VQNVHAERIHFKGTDQGIRIKANRDRGNDVSNISFKDIDMVDVKTAILITEYYPKAAPDG 330
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
+V P + P + I I++V T +G I GL SP G+ L N++LQ G
Sbjct: 331 EVPSMPMGRLTPR----FHDIAIENVHATGSGSAGTIVGLPESPVEGLSLKNVDLQAKTG 386
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI + +I+I +V NSPFW IHP++C ++++R V I PN DG DP+S
Sbjct: 213 RPQLINLYSCHTILIEDVTLLNSPFWVIHPLFCESLIVRGVNIFNRG--PNGDGCDPESC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG + G + PS I +R + G+ +GSE SGG
Sbjct: 271 KNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGGVVIGSEISGG 330
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E+ + N+ I +KT+ RGG I N+ V D+ + R+ + + ++
Sbjct: 331 YRNLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRDITVGQCREAV-LRINLQYENR 389
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+ N N PVV + +K+V K + LI GL +
Sbjct: 390 ENCNRNFPPVVRNVHLKNVTCEKSRLGVLIIGLDD 424
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 15/237 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 182 FFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPSPNTDGINPE 240
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 241 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 300
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS++ M N ++ + +
Sbjct: 301 GSVRKVTISNCVFDGTERGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVL-------N 353
Query: 189 DKFNP-------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
K++P P+ + I + T V+ I GL+ +P + I L +I++QG
Sbjct: 354 LKYSPMPAEPKSERTPIFRNVHISGMTVTDVKTPIKIVGLEEAPISDIVLRDIHIQG 410
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats.
Identities = 85/242 (35%), Positives = 117/242 (48%), Gaps = 18/242 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI F+ I IS V SPFW IHP+ C NV + V I + PN DG DP+
Sbjct: 210 RPQLINFVKGNRIRISGVTLLRSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEGC 267
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I+++ TGDD +A+KSG + G + PS I IR G+ +GSE SGG
Sbjct: 268 ENVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCVMEDGHGGVVIGSEISGG 327
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDVGDHP 187
+N+ AE + + + + +KTN RGG I NI + V + ++ +KI D P
Sbjct: 328 CQNIYAEDCEMDSPELDRVLRIKTNNCRGGLIENINMRRVKVGQCKEAVVKINLDY--EP 385
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSPFTGICLSNINL 236
+ PVV + ++DV K LI G LKN F GI N+ +
Sbjct: 386 KEPCYRGFEPVVRNVNVEDVTCQKSAYGVLIVGRDSVENVTDIRLKNCSFNGISKENVKI 445
Query: 237 QG 238
G
Sbjct: 446 TG 447
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 368 AEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 416
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 123/242 (50%), Gaps = 6/242 (2%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPN 61
+Q F RP I+ M +++ I + +NSPFW ++P +C NV I VTI P +PN
Sbjct: 189 KQMKRGFLRPPFIQTMYCKNVFIEGITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPN 248
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGI+P+S +NV I + +IS GDD + +KSG D G P+ TI T S G+
Sbjct: 249 TDGINPESCNNVHISNCHISVGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLSGHGGV 308
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
+GSE SG V + + GI +K+ GRGG + I V ++ M+N ++ I
Sbjct: 309 VIGSEMSGDVRKISISNCVFDGTDRGIRIKSARGRGGIVEEIRVDNIIMKNIKQQ-AIVL 367
Query: 182 DVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D+ + P P I ++ G +V ++ + GL+ P I ++IN++
Sbjct: 368 DL-QYAKTTLEPVSERTPRFRNIHFSNITG-QVNEAAYLNGLEEMPIENISFNDINMEAK 425
Query: 240 AG 241
G
Sbjct: 426 TG 427
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ ++++I V N+PFW ++PV C NV + V ++ PN+DG DP+
Sbjct: 253 YLRPPFIQPYACKNVLIEGVTITNAPFWLLNPVLCENVTVDGVNCIS--HGPNSDGCDPE 310
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I++ TGDD +A+KSG + G P+ I I G+ +GSE S
Sbjct: 311 SCKNVVIKNCLFDTGDDCIAIKSGRNADGRRLNTPTENIVISHCKMREGHGGVVIGSEIS 370
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GGV NV EH + N+ GI +KTN RGG I N + D+ + I I D +
Sbjct: 371 GGVRNVFVEHCEMSSPNLDRGIRIKTNSVRGGVIENFFIRDITIGEVTTAIVIDFDYEEG 430
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
KF P V I I+++ + ++G K SP + L+N + + V
Sbjct: 431 DAGKFT----PTVRNIDIRNLHCENAKHVFQVRGYKRSPIQNLHLTNCHFKQV 479
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 113/226 (50%), Gaps = 1/226 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + R++ I + NSPFW ++P +C NV ++ VTI SPNTDGI+P+
Sbjct: 188 FLRPPFIQPLRCRNVRIEGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPSPNTDGINPE 246
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S SNV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 247 SCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGHGGVVIGSEMS 306
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV+ V + GI +K+ GRGG + +I VS+V M + ++ +
Sbjct: 307 GGVKKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSDIKREAVVLNLKYSQMK 366
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
+ PV I + + Q + GL +P GI +I
Sbjct: 367 MEKKSERTPVFRNIFVTGLTVRGTQTPLKVDGLPEAPIEGIVFRDI 412
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 124/237 (52%), Gaps = 18/237 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ ++F R++++ V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 185 YLRPSFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 242
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 126
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 243 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 302
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 181
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 303 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 362
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 363 EEGEY---------LPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 410
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 124/237 (52%), Gaps = 18/237 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ ++F R++++ V NSP W +HPV NV+IR + I + PN DGIDP+
Sbjct: 187 YLRPSFVQFYRCRNVLVEGVKIINSPMWCVHPVLSENVIIRNIEI--SSTGPNNDGIDPE 244
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRR--VTGSSPFSGIAVGSE 126
S + IE TGDD V +KSG D G G PS I +R V + G+ +GSE
Sbjct: 245 SCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE 304
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSD-----VYMENARKGIKIAG 181
SGGV NV+A + NV + +KTN RGG++ NI D V E R ++
Sbjct: 305 MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDN 364
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ G++ LPVV + +K++ T + + I+GL+N I +S+ ++G
Sbjct: 365 EEGEY---------LPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEG 412
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 116/248 (46%), Gaps = 15/248 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN++ + I++ V FQNSP W +HP+ C ++ +R VT P + N DG+D +
Sbjct: 211 FLRPNMLSLTRCKRILLEGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQNGDGLDLE 270
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N ++D GDD + +KSG DE G G P+ IT+R G +GSE S
Sbjct: 271 SCRNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRNSRVYHAHGGFVIGSEMS 330
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GGV+N+ + VG+ KT GRGG + NI V + M + A+
Sbjct: 331 GGVKNLYVSNCTFMGTDVGLRFKTARGRGGVVENIFVDGIDMTDIAGEAILFDMYYAAKD 390
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ G+ + P + P A P I++V + + LI+GL I + N
Sbjct: 391 PVPQQGESNELPVIQPQPLSEATPQFRSFQIRNVTCKGAETAILIRGLPEMAVKDILIEN 450
Query: 234 INLQGVAG 241
LQ G
Sbjct: 451 AVLQSRKG 458
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 125/261 (47%), Gaps = 25/261 (9%)
Query: 1 MW----RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
MW R + L + RP + F +++ I + NSP W ++P+ C NV + V I P
Sbjct: 115 MWWKLHRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQNP 174
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
DSPNTDGI+P+S V I + YI GDD V +KSG ++ + P I I +
Sbjct: 175 YDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVRI--PCENIAITNCIMAH 232
Query: 117 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN---- 172
GI +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 233 GHGGIVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGIVEDIRVSNIVMKNVICP 292
Query: 173 --------ARKG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGL 221
KG K D +P D + P+V I I DV + + +G + GL
Sbjct: 293 FAFYMYYHCGKGGKEKRVWDKSPYPVD----STTPIVRRIYISDVIVRQARAAAGFLYGL 348
Query: 222 KNSPFTGICLSNINLQGVAGP 242
P + SN+ ++ P
Sbjct: 349 TEMPIEDVVFSNVTVEMAQNP 369
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI SPNTDGI+P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T + G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLAGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS++ M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNIVMSNIKQEAVVLNLKYSQMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
+ P+ + I + T + I GL+ +P + I L +I++QG
Sbjct: 368 AEAKSERTPIFRNVHISGMTVTDAKTPIKIVGLEEAPISDIVLRDIHIQG 417
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + ++I V +NSPFW I+PV +V++R V ++ PN+DG +P+
Sbjct: 229 FLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG--PNSDGCNPE 286
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + V IE+ TGDD +A+KSG + G P + I+ + G+ +GSE S
Sbjct: 287 SCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVVMGSEIS 346
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GG N+ A + N+ GI +KTN RGG I N+ + D+ + R I I G
Sbjct: 347 GGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEG 406
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D G N +P VN + I ++ K Q++ ++G + +P +G+ L ++ A
Sbjct: 407 DAG---------NFMPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTAA 457
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 128/238 (53%), Gaps = 18/238 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ +++I V +NSPFW ++PV C NV +R I + PN+DG DP+
Sbjct: 222 YLRPPFIQPYACINVLIEGVTIKNSPFWLVNPVLCKNVTVR--NIHCDSHGPNSDGCDPE 279
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ ++V IE+ TGDD +A+KSG + G G P I I S G+ +GSE S
Sbjct: 280 ACTDVLIENCIFDTGDDCIAIKSGRNADGRRVGQPCENILINNCQMRSGHGGVVIGSEIS 339
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GGV N+ A++ + ++ GI +KTN RGG ++N+ D+ + ++ + I G
Sbjct: 340 GGVRNLYAQNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRDIRIGQVKEAVVINFYYEEG 399
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
DVG KF PV+ I I++++ ++ ++G ++P TG+ + N+ + V
Sbjct: 400 DVG-----KFT----PVLEDINIENLYVEHATRAFSLRGYPHTPITGVSIKNLTILKV 448
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 139/286 (48%), Gaps = 46/286 (16%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI M + +S++ + FW + P +C NV I + I+ PNTDG+DPDS
Sbjct: 673 RPMLIAPMWVDGLYLSDLTLTDPAFWTVAPAFCKNVHIHDLRIIT--SGPNTDGVDPDSC 730
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV------------------ 112
NV +E YISTGDD +A+KSG +A P++ +TIR V
Sbjct: 731 QNVLVERCYISTGDDCIAIKSGRGPQALAINMPTANVTIRHVPQRVGRDYDATAIGSYAL 790
Query: 113 ------TGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVS 166
T + GI++GSE SGG+ +VL +++ L G+ VKT +GRGG +RN+T
Sbjct: 791 CRGQIRTDCTTGHGISIGSEMSGGIYDVLFDNLTLSGTTNGVRVKTCMGRGGSVRNVTYR 850
Query: 167 DVYMENARKGIKIAGD------VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG 220
++ +++ + I D VGD ALP + I +++V V+ + ++
Sbjct: 851 NMVIDSVDTAVLINQDYNSVTCVGD---------ALPNFSDILVQNVIANNVKMAFELEC 901
Query: 221 LKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGS-AYQVKPWPCS 265
L+++ G+ N+ + + KC+ V V P PC+
Sbjct: 902 LQDNSCAGLRFENVTVTAFQNAS----KCAHVQPEIGPNVSPVPCT 943
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + ++I V +NSPFW I+PV +V++R V ++ PN+DG +P+
Sbjct: 229 FLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG--PNSDGCNPE 286
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + V IE+ TGDD +A+KSG + G P + I+ + G+ +GSE S
Sbjct: 287 SCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVVMGSEIS 346
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GG N+ A + N+ GI +KTN RGG I N+ + D+ + R I I G
Sbjct: 347 GGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEG 406
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D G N +P VN + I ++ K Q++ ++G + +P +G+ L ++ A
Sbjct: 407 DAG---------NFMPQVNNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTAA 457
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 189 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 247
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 248 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 307
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 308 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 367
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 368 VEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 416
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 124/257 (48%), Gaps = 21/257 (8%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+ R + L + RP I F ++ I + NSP W ++P+ C NV + V I P DSP
Sbjct: 119 LHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDSP 178
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S V I + YI GDD V +KSG ++ P ITI + G
Sbjct: 179 NTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG 236
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR------ 174
+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 237 VVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFY 296
Query: 175 ------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSP 225
KG K D +P D+ + P+V I I DV + + +G + GL P
Sbjct: 297 MYYHCGKGGKEKRVWDKSPYPVDE----STPIVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 226 FTGICLSNINLQGVAGP 242
+ SN+ ++ P
Sbjct: 353 IEDVVFSNVTVEMAQNP 369
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + + + I V NSPFW ++P +C NV I+ +TI A SPNTDG++P+
Sbjct: 198 FFRPPFIQPVRCKKVKIEGVKIINSPFWTVNPEFCDNVTIKGITI-DNAPSPNTDGVNPE 256
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D +IS GDD + +KSG D G P ITI T S G+ +GSE S
Sbjct: 257 SCRNVHISDCHISVGDDCITIKSGRDAQARRLGVPCENITITNCTMLSGHGGVVIGSEMS 316
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V V + GI +K+ GRGG + +I VS+V M N ++ +
Sbjct: 317 GSVRKVTISNCVFDGTDRGIRIKSTRGRGGVVEDIRVSNVVMSNIKQEAVVLNLKYSKMP 376
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ P+ + I + T V+ I GL+ +P + I L +I++Q
Sbjct: 377 VEPKSERTPIFRNVHISGMTVTNVKTPIKIVGLEEAPISDIVLRDIHIQ 425
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 116/259 (44%), Gaps = 25/259 (9%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+R F RP +I + ++++ VIFQNSP WNIHP C+N+++ +T+ P + N D
Sbjct: 219 ERMHDFLRPVMIAVHHCENVLLEGVIFQNSPCWNIHPAMCTNLIVNDITVRCPDYAQNGD 278
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GID +S NV + +S GDD + +KSG D+ G G P I + G V
Sbjct: 279 GIDIESCRNVVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCIVFHGHGGFVV 338
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN----------- 172
GSE SGGV NV + VG+ K+ GRGG + NI + D+ M N
Sbjct: 339 GSEMSGGVRNVRVSNCTFSGTDVGLRFKSARGRGGVVENIWIEDIAMNNILQEPLLFDLF 398
Query: 173 ----------ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK 222
A G D+ P D+ P I I++VW +++ GL
Sbjct: 399 YGGKSASEAHAEGGDAEVTDIAPKPVDE----TTPAFRDIHIRNVWCRGARRAMYFNGLP 454
Query: 223 NSPFTGICLSNINLQGVAG 241
+ + N + V G
Sbjct: 455 EMNVERVTVENTQIYAVTG 473
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 77/105 (73%)
Query: 6 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 65
T TRP LIE M S +I ISN+ NSP WN+HPVY SN++++ +TI AP SPNTDGI
Sbjct: 95 TRRHTRPYLIELMFSDNIQISNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDGI 154
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR 110
+PDS +NV IED YI +GDD VAVKSGWDEYGI +G P+ + I
Sbjct: 155 NPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ ++ +I++ FQNSP WNIHP+ N+++R +T+ P + N D
Sbjct: 214 QTVRSFLRPVMVSLVDCENILLDGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGD 273
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S NV + ++ GDD + +KSG +E G P+ + I+ T G V
Sbjct: 274 GLDLESCENVLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKNNTVYHGHGGFVV 333
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR--------- 174
GSE SGGV + H N G+ K+ GRGG + I +S +YM +
Sbjct: 334 GSEMSGGVSKIHISHCNFIGTDTGLRFKSTRGRGGVVEQIYISHIYMNEIKTDAIRFNLY 393
Query: 175 ---KGIKIAGDVGDHPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 228
+ ++ D+ ++ +D+ P P I I D+ K +SG GL
Sbjct: 394 YGGQAPDLSNDLAENTEDRDVPEVTIETPSFKDIYISDITSVKAHKSGFFMGLPEMNIQN 453
Query: 229 ICLSNINLQGVAGPT 243
+ + N G G T
Sbjct: 454 VSIKNSLFHGEEGFT 468
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN++ + +++ V FQNSP W +HP+ C +V +R VT+ + N DG+D +
Sbjct: 446 FLRPNMVSLTRCQYVLLDGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYAQNGDGVDLE 505
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N +E+ TGDD + +KSG DE G G P+ IR G +GSE S
Sbjct: 506 SCRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCRVYQAHGGFVIGSEMS 565
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GGV N+ + VG+ KT GRGG + NI V+++ M A+
Sbjct: 566 GGVRNMYVSNCQFMGTDVGLRFKTARGRGGVVENIYVNNISMTQIAGEAILFDMYYAAKD 625
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ AGD + P + P P + +V + LI+GL P + I + N
Sbjct: 626 PVPQAGDKNELPTIEGKPLNEGTPRFRSFFVHNVSCLGAETGILIRGLPEMPVSNILIEN 685
Query: 234 INLQGVAG 241
LQ G
Sbjct: 686 AVLQTRKG 693
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN+I I++ V FQNS WNIHP+ +++ IR + + P S N DG+D +
Sbjct: 213 YLRPNMILLEKCERILLEGVTFQNSAAWNIHPLMSADLTIRNINVRNPWYSQNGDGLDIE 272
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV +E S GDD + +KSG +E G G P+ + +R T G VGSE S
Sbjct: 273 SCKNVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLWVRNCTVYHAHGGFVVGSEMS 332
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GG +N+ ++ +G+ KT GRGG + N+ +++++M++ A+
Sbjct: 333 GGAKNLYVDNCTFIGTDIGLRFKTTRGRGGVVENVYINNIFMKDIPGEAILFDMYYEAKD 392
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
I ++G+ + P +F P A P I +V ++ I+GL I L+
Sbjct: 393 PIVLSGEHREPPKVEFLPVTEATPQFKDFYINNVVCDGAAKALFIRGLPEMHIKNIQLTR 452
Query: 234 INLQGVAG 241
+++ G
Sbjct: 453 LDMVAKEG 460
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+ R + L + RP I F ++ I + NSP W ++P+ C NV + V I P DSP
Sbjct: 119 LHRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDSP 178
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S V I + YI GDD V +KSG ++ P ITI + G
Sbjct: 179 NTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG 236
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR------ 174
+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 237 VVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFY 296
Query: 175 ------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSP 225
KG K D +P D + PVV I I DV + + +G + GL P
Sbjct: 297 MYYHCGKGGKEKKVWDKSPYPVD----STTPVVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 226 FTGICLSNINLQGVAGP 242
+ SN+ ++ P
Sbjct: 353 IEDVVFSNVTVEMAQNP 369
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 11/236 (4%)
Query: 3 RQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
RQR + RP I+ R++++ +V N+PFW +HPV C NV R + + +
Sbjct: 204 RQRHYSDGHYLRPPFIQPYQCRNVLLEDVTIINAPFWLVHPVLCDNVTARRLHLQSLG-- 261
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
PN+DG +P+S NV IE + TGDD +A+KSG + G PS I IR +
Sbjct: 262 PNSDGCNPESCRNVLIEHCFFDTGDDCIAIKSGRNADGRRLNIPSENIVIRHCEMRAGHG 321
Query: 120 GIAVGSETSGGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
G+ +GSE SGGV NV A ++ ++ G +KTN RGG I NI + D+ + + I
Sbjct: 322 GVVIGSEISGGVRNVYAHDNRMSSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAI 381
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
I + KF+ P V I + ++ QQ I+G +P + ++N
Sbjct: 382 VINFHYEEGDAGKFD----PTVRNINLDNISCEHAQQVFQIRGFDRAPIKQLSITN 433
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 10/242 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPNL+ N + +++ V FQNSP W +HP+ C ++ +R VT P + N DG+D +
Sbjct: 222 FLRPNLVVLTNCKKVLLEGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYAHNGDGMDIE 281
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N IE + GDD + +KSG DE G G P+ IR T + G VGSE S
Sbjct: 282 SCKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRNNTVYNGHGGFVVGSEMS 341
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGI--------KI 179
GG + + G+ K+ GRGG + +I D++M+N A++ I K
Sbjct: 342 GGARYLFVSNCTFMGTDKGLRFKSVRGRGGVVEHIYAKDIFMKNIAQEAIFFDMYYFVKF 401
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
A D G+ + PV + +++ T ++ ++GL I ++N+ L+
Sbjct: 402 ATD-GERDERPVVNEGTPVFRNMRFENIVCTGAKKGIFVRGLPEMAIQTIAMANMVLETE 460
Query: 240 AG 241
G
Sbjct: 461 KG 462
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+ R + L + RP I F ++ I + NSP W ++P+ C NV + V I P DSP
Sbjct: 115 LHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSP 174
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S V I + YI GDD V +KSG ++ P ITI + G
Sbjct: 175 NTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG 232
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR------ 174
+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 233 VVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFY 292
Query: 175 ------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSP 225
KG K D +P D + P+V I I DV + + +G + GL P
Sbjct: 293 MYYHCGKGGKEKRVWDKSPYPVD----DTTPIVRRIYISDVVVREARAAAGFLYGLTEMP 348
Query: 226 FTGICLSNINLQGVAGP 242
+ SN+ ++ P
Sbjct: 349 IEDVVFSNVTVEMAQNP 365
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+ R + L + RP I F ++ I + NSP W ++P+ C NV + V I P DSP
Sbjct: 119 LHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSP 178
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S V I + YI GDD V +KSG ++ P ITI + G
Sbjct: 179 NTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG 236
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR------ 174
+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 237 VVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFY 296
Query: 175 ------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSP 225
KG K D +P D + P+V I I DV + + +G + GL P
Sbjct: 297 MYYHCGKGGKEKRVWDKSPYPVD----DTTPIVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 226 FTGICLSNINLQGVAGP 242
+ SN+ ++ P
Sbjct: 353 IEDVVFSNVTVEMAQNP 369
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+ R + L + RP I F ++ I + NSP W ++P+ C NV + V I P DSP
Sbjct: 119 LHRDKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDSP 178
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S V I + YI GDD V +KSG ++ P ITI + G
Sbjct: 179 NTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAHGHGG 236
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR------ 174
+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 237 VVIGSEMSGGVRNVVISNCVFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFY 296
Query: 175 ------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSP 225
KG K D +P D + PVV I I DV + + +G + GL P
Sbjct: 297 MYYHCGKGGKEKKVWDKSPYPVD----STTPVVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 226 FTGICLSNINLQGVAGP 242
+ SN+ ++ P
Sbjct: 353 IEDVVFSNVTVEMAQNP 369
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 8/237 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ ++++I V NSPFW +HPV C +V +R VT + PN DG DP+
Sbjct: 237 FLRPAFIQPYLCQNVLIEGVTLVNSPFWLLHPVLCQSVTVRGVT--CRSHGPNNDGCDPE 294
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+V IE TGDD +A+KSG +E G G + +R G+ +GSE S
Sbjct: 295 CCDHVVIEGCTFDTGDDCIAIKSGRNEDGRRVGQACRNLVVRNCQMKDGHGGLVLGSEIS 354
Query: 129 GGVENVLAEHINLYN--VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GGV NV ++ + + + +KTN RGG I I + ++ + + + I +
Sbjct: 355 GGVYNVFLDNCQMDSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAVSINFFYEEG 414
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
+ +F LP V I I ++ Q++ ++G ++P G+ LSN + VA P+
Sbjct: 415 QEGRF----LPEVRDIHIDNLVVRSAQRAFYLRGFASAPIEGVTLSNCRIDKVAAPS 467
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+ R + L + RP I F ++ I + NSP W ++P+ C NV + V I P DSP
Sbjct: 119 LHRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSP 178
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S V I + YI GDD V +KSG ++ P ITI + G
Sbjct: 179 NTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCIMAHGHGG 236
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR------ 174
+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 237 VVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFY 296
Query: 175 ------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSP 225
KG K D +P D + P+V I I DV + + +G + GL P
Sbjct: 297 MYYHCGKGGKEKRVWDKSPYPVD----STTPIVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 226 FTGICLSNINLQGVAGP 242
+ SN+ ++ P
Sbjct: 353 IEDVVFSNVTVEMAQNP 369
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+ R + L + RP I F ++ I + NSP W ++P+ C NV + + I P DSP
Sbjct: 119 LHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPYDSP 178
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S V I + YI GDD V +KSG ++ P ITI + G
Sbjct: 179 NTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAHGHGG 236
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR------ 174
+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 237 VVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFY 296
Query: 175 ------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSP 225
KG K D +P D + PVV I I DV + + +G + GL P
Sbjct: 297 MYYHCGKGGKEKRVWDKSPYPVD----DTTPVVRRIYISDVVVRQARAAAGFLYGLTEMP 352
Query: 226 FTGICLSNINLQGVAGP 242
+ SN+ ++ P
Sbjct: 353 IEDVVFSNVTVEMAQNP 369
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+ ++I V +NSPFW I+PV C +VVIR V ++ PN+DG DP+S
Sbjct: 223 RPPFIQPYGCERVLIEGVTIRNSPFWLINPVLCKDVVIRGVNCVS--FGPNSDGCDPESC 280
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V IE+ TGDD +A+KSG + G P + I+ S G+ +GSE SGG
Sbjct: 281 QRVLIENCLFDTGDDCIALKSGRNAEGRRLATPIQQVVIQDCLMKSGHGGVVIGSEISGG 340
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AGDV 183
+ + A + N+ G+ +KTN RGG I I V D+ + + I I GD
Sbjct: 341 AKQIFARRCRMSSPNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVINFYYEEGDA 400
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
G N LP V + I + K Q++ I+GL + +GI +S+++ +
Sbjct: 401 G---------NFLPEVKDLKISNFRVKKAQRAFEIRGLPRAGISGIQMSDVSFE 445
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 28/263 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI+F R++++ ++ + SPFW +HP+ C +V IR V+I A N DG+DP+ S
Sbjct: 212 RPHLIQFNRCRNVLVEDISIRGSPFWTLHPLLCRDVTIRRVSI--QAHGHNNDGVDPEMS 269
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IED GDD V+VKSG D P + +R + +AVGSE SGG
Sbjct: 270 QNVLIEDCVFDQGDDAVSVKSGRDMDAWRLATPCRNVVVRNCRVLNGHQLMAVGSELSGG 329
Query: 131 VENVLAEHINLYNVGVG-----------IHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
+EN+ + + G G ++VKTN RGG++RN+ +S V +
Sbjct: 330 IENIWVDDCHFVGDGRGGDDHAVPINNLLYVKTNERRGGYVRNVHMSRV------TATTL 383
Query: 180 AGDVGDHPDDKFNP---------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 230
AG V D L + + + DV + Q +I+G ++ P +
Sbjct: 384 AGSVLAVETDVLYQWRTLLPTYVRRLTAIERLRVSDVHVQQAQSVAVIKGERDLPIQDVR 443
Query: 231 LSNINLQGVAGPTSPPLKCSDVS 253
LS + ++ V+G + DV+
Sbjct: 444 LSRVRVERVSGTPTIVENARDVT 466
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 124/257 (48%), Gaps = 21/257 (8%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+ R + L + RP I F ++ I + NSP W ++P+ C NV + + I P DSP
Sbjct: 119 LHRNKELKYPRPRSICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPYDSP 178
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S V I + YI GDD V +KSG ++ P ITI + G
Sbjct: 179 NTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCIMAHGHGG 236
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR------ 174
+ +GSE SGGV NV+ + GI +KT GRGG + +I VS++ M+N
Sbjct: 237 VVIGSEMSGGVRNVVISNCIFEGTDRGIRIKTRRGRGGVVEDIRVSNIVMKNVMCPFAFY 296
Query: 175 ------KG--IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSP 225
KG K D +P D+ + P+V I I DV + + +G + GL P
Sbjct: 297 MYYHCGKGGKEKRVWDKSPYPVDE----STPIVRRIYISDVVVREARAAAGFLYGLTEMP 352
Query: 226 FTGICLSNINLQGVAGP 242
+ SN+ ++ P
Sbjct: 353 IEDVVFSNVTVEMAQNP 369
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 118/238 (49%), Gaps = 5/238 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN ++F S++I+I V F+NSP W +HPV N++IR V + PN DG DP+
Sbjct: 209 YLRPNFVQFYKSKNILIEGVTFKNSPMWFLHPVLSENIIIRNVKTIG--HGPNNDGCDPE 266
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE Y GDD +A+KSG + G PS I IR T G+ +GSE S
Sbjct: 267 SCKNVLIEGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRNCTMKDGHGGVVIGSEIS 326
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GG V AE + N+ + +K+N RGG + ++ V ++ + I + ++
Sbjct: 327 GGCRFVFAEECKMDSPNLDRMLRIKSNTVRGGVVEHVYVRNIEVGEVSNAI-VRMNMFYD 385
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
P + + P I +++V K + GL+ SP + + N + GV S
Sbjct: 386 PKEIGPRDFPPKFRNIRVENVTSRKSDYALEFLGLEESPIENVEIINCDFNGVKKENS 443
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 116/251 (46%), Gaps = 24/251 (9%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ F +++ + VIFQNSP WNIHP+ C NV+I + + P+ + N D
Sbjct: 217 QSVRDFLRPVMVSFRECKNVYLQGVIFQNSPAWNIHPLMCENVIIDGIQVRNPSYAQNGD 276
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S NV + +S GDD + +KSG +E G G P + + T G V
Sbjct: 277 GLDLESCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCTVFKGHGGFVV 336
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM------------- 170
GSE SGGV N+ + VG+ K+N GRGG + NI +S++ M
Sbjct: 337 GSEMSGGVRNISVTNCQFLGTDVGLRFKSNRGRGGVVENIFISNISMIDIATEPLHFNLY 396
Query: 171 -------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
E G KI P D+ P ITIK+V+ ++ ++ GL
Sbjct: 397 YGGKSAVEELEDGTKIVRQEKLPPVDE----TTPTFKNITIKNVYCSEANKAMYFYGLPE 452
Query: 224 SPFTGICLSNI 234
+ + N
Sbjct: 453 HNIKNLQIENF 463
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 18/240 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+ + ++I V +NSPFW I+PV +V++R V ++ PN+DG +P+
Sbjct: 229 FLRPPFIQPYGCKRVLIEGVTIRNSPFWLINPVLSEDVIVRNVNCISYG--PNSDGCNPE 286
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + V IE+ TGDD +A+KSG + G P + I+ + G+ +GSE S
Sbjct: 287 SCNRVLIENCLFDTGDDCIALKSGRNNDGRRLATPVQNVVIQDCIMRAGHGGVVMGSEIS 346
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GG N+ A + N+ GI +KTN RGG I N+ + D+ + R I I G
Sbjct: 347 GGARNIFARRCRMSSPNLARGIRIKTNSVRGGLIENVYIRDIEIGEVRDAIVINFFYEEG 406
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D G N +P V + I ++ K Q++ ++G + +P +G+ L ++ A
Sbjct: 407 DAG---------NFMPQVKNLHISNLTVQKAQRAFELRGFERAPISGVTLHHVQFNNTAA 457
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 120/242 (49%), Gaps = 12/242 (4%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP LI F S I IS++ SP W +HP+ C +V I+ ++IL PADSPNTDGID
Sbjct: 130 LAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISILNPADSPNTDGID 189
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S N+ I + I GDD +A+KSG ++ + ITI T + +GSE
Sbjct: 190 PESCKNLRILNCNIDVGDDCIAIKSGTEQTTTS-KSACENITISNCTMVHGHGAVVLGSE 248
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD--VG 184
SG + NV + GI +KT GRGG + NITVS + ME+ I G
Sbjct: 249 MSGNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDVLCPFVINAYYFCG 308
Query: 185 DHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNIN 235
+K+ NP P I ++ KV+ +G I GL P + +NI
Sbjct: 309 PKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAAGFIYGLPEMPVQDVSFTNIQ 368
Query: 236 LQ 237
++
Sbjct: 369 IE 370
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 17/247 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
++ + RP ++ + ++I++ V FQNSP WNIHP+ N++++ VT+ P S N D
Sbjct: 160 RKVRDYLRPVMVNLVKCKNILLEGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGD 219
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GID +S NV I D GDD + +KSG +E+G G P+ + I G +
Sbjct: 220 GIDVESCKNVVIYDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCIVYHGHGGFTI 279
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA---------- 173
GSE SGGV N+ + N +G+ K+ GRGG + NI + ++YM++
Sbjct: 280 GSEMSGGVRNIKVTNCNFIGTDIGLRFKSTRGRGGVVENIYIDNIYMKDIPTEALSFNMY 339
Query: 174 ------RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
+ I +A + + + P I + D++ + + +IQGL
Sbjct: 340 YGGQAPTEDIPLAEKLKNRKVLNVDETT-PQFRNIFLNDIYCIGAEDAVIIQGLPEMKIK 398
Query: 228 GICLSNI 234
I L+N+
Sbjct: 399 NIVLNNV 405
>gi|309779639|ref|ZP_07674398.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|349616569|ref|ZP_08895706.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
gi|308921580|gb|EFP67218.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|348612214|gb|EGY61836.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
Length = 671
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 109/182 (59%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF+ ++++ N N+PFW HPV+C+NVVIR VT+ DS PN DG D
Sbjct: 339 YLRPCMVEFIGCTNVLMENYRTVNTPFWQHHPVHCTNVVIRGVTV----DSIGPNNDGFD 394
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ SNV E+ +TGDD +A+KSG YG P+ I+ T +S GI +GSE
Sbjct: 395 PDACSNVLCENVTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIQNCTMNSGHGGITLGSE 452
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+N+ A ++ + N + + I +KTN+ RGGF++N V++V + N G+ +
Sbjct: 453 MGGGVQNIYARNLAMLNQFWATNSLNIAIRIKTNMNRGGFVKNFYVTNVSLPN---GVNL 509
Query: 180 AG 181
G
Sbjct: 510 TG 511
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 122/229 (53%), Gaps = 9/229 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 215 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 272
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 273 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHGGVVIGSEISGG 332
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I NI V +V + R+ + + ++
Sbjct: 333 YRNLFVEDCQMDSPNLDRVIRIKTSTCRGGLIENIFVRNVTVGQCREAV-LRINLQYENR 391
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+K P+V + +K+V K + LI GL++ +SNI+++
Sbjct: 392 EKCKRGFEPIVRNVHLKNVTCEKSELGVLIIGLEDDKH----VSNISIE 436
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 121/252 (48%), Gaps = 17/252 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ +N +++ FQNSP WNIHP+ NV+IR + + P S N DG+D +
Sbjct: 235 FLRPVMVSIVNCNKVLLDGPTFQNSPAWNIHPLMSENVIIRNLKVRNPWYSQNGDGLDLE 294
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I ++ GDD + +KSG D+ G G P+ + ++ T G +GSE S
Sbjct: 295 SCKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKNNTVYHAHGGFVIGSEMS 354
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA-RKGIKI-AGDVGDH 186
GGV+N+ + N VG+ K+ GRGG + NI +SD+ M N + I+ G+
Sbjct: 355 GGVKNINVSNCNFIGTDVGLRFKSTRGRGGVVENIYISDINMINIPTEAIRFNMFYSGNA 414
Query: 187 PDDKFNPNA---------------LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 231
P + N NA PV I +K++ T ++ GL + L
Sbjct: 415 PILEENQNAEDEQRDEQKVAVTEETPVFKNIYMKNIIATNSGKAAFFMGLPEKSLENVTL 474
Query: 232 SNINLQGVAGPT 243
N L+ G T
Sbjct: 475 ENAMLEADEGIT 486
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 124/245 (50%), Gaps = 28/245 (11%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN ++F S +I++S V NSP W IHPV NV++ VT+ +P D PN+DG++P+SS
Sbjct: 221 RPNFVQFYRSSTILVSGVTLTNSPMWMIHPVLSENVLVDGVTLDSP-DGPNSDGVNPESS 279
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I +S + GDD +AVKSG + G G PS I I + G+ +GSE SG
Sbjct: 280 RNVVIRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMFAGHGGVVIGSEMSGD 339
Query: 131 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN------ARKGIKI--- 179
V NV AE +N ++ + +KTN RGG TV VY + A I+I
Sbjct: 340 VRNVFAERNVMNSPHLDRALRIKTNSVRGG-----TVEGVYFRDNDVPAVADAVIRINFH 394
Query: 180 --AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
GDVGD P V GI I +V + + ++G + SP T I + +
Sbjct: 395 YEEGDVGDF---------TPTVRGIHIDNVHSVGGEFALYLRGYERSPITDITIRDSTFS 445
Query: 238 GVAGP 242
P
Sbjct: 446 EATTP 450
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP LI F + + I +++ +NSP W I+P+ C NV I ++IL PADSPNTDGI+
Sbjct: 179 LQYPRPKLISFDRCQRVTIKDIMLKNSPSWTINPIACYNVTIDNLSILNPADSPNTDGIN 238
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S SNV I + I GDD +A+K+G ++ ITI T G+ +GSE
Sbjct: 239 PESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCTMVHGHGGVVLGSE 296
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVG 184
SG + NV + GI +K+ GRGG I +I VS++ ME + + G
Sbjct: 297 MSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVICPFILNLYYFCG 356
Query: 185 DHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNIN 235
DK+ NP + P I D+ +V +G + GL I SNI+
Sbjct: 357 PRGKDKYVWDKNPYPVTDETPCFRRIHFADITARQVHAAAGFLYGLAEQYIAEITFSNID 416
Query: 236 L 236
+
Sbjct: 417 I 417
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 19/239 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN I+F R+++I V NSP W IHPV C NV +R VT+ + PN DG +P+
Sbjct: 218 YLRPNFIQFYRCRNVLIEGVTIVNSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNPE 275
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S V IED TGDD +A+KSG + G PS+ I IR G+ +GSE S
Sbjct: 276 SCRYVLIEDCLFDTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCKMRDGHGGVVIGSEIS 335
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKI-----A 180
GG ++ AE + N+ + +KTN RGG I +I + +V + + A I++
Sbjct: 336 GGAHHIYAERCEMSSPNLDRALRIKTNSVRGGLIEHIYMREVEVGQVADAVIRVNFYYEE 395
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
GD G P D P+V I ++++ + + ++G SP + L + GV
Sbjct: 396 GDAG--PFD-------PIVRHIEVRNLTSRQSPYALYLRGYARSPIRDVRLIDCTFDGV 445
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 129/239 (53%), Gaps = 14/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+ S++I+I ++ NSPFW ++PV C N+ I +T+ + N DG+DP+S
Sbjct: 238 RPPFIQPYKSKNILIKDITILNSPFWEVNPVLCENIKIDSITV--DSHLYNNDGVDPESC 295
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++ IED + +TGDD +A+KSG + G G PS I IR GI +GSE SGG
Sbjct: 296 KDMIIEDCHFTTGDDCIAIKSGRNNEGRNIGVPSQNIIIRNNKFEDGHGGITIGSEISGG 355
Query: 131 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
V ++ A H N ++ + I KTN RGG + NI V + + ++ + I D
Sbjct: 356 VNDIFA-HDNYFDSSELDYPIRFKTNAERGGKLENIYVKNSVVNKSKIAV-IHADF--FY 411
Query: 188 DDKFNPNALPVVNGIT---IKDVWGTKVQQSG--LIQGLKNSPFTGICLSNINLQGVAG 241
++ N N +P++ IT IK V G + + ++G K++P I + ++ L GV G
Sbjct: 412 EEGTNGNYMPILRNITLSNIKTVEGGSIDANNALFLKGFKDAPIENILIEDVYLNGVKG 470
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 10/237 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN I+ +++ I++V NSP WN++PV C NV+I V +++ PN DG DP+
Sbjct: 228 YLRPNFIQPYQCKNVWIADVKLINSPMWNLNPVLCENVLIEKVKVIS--HGPNNDGCDPE 285
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ NV I D Y TGDD +A+KSG DE G G P+ I G+ +GSE +
Sbjct: 286 ACKNVWIRDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCVMKDGHGGVVIGSEIA 345
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GG +N+ A + + N+ + +KT+ RGG I N+ + +V + ++ +
Sbjct: 346 GGAKNIYAINCEMDSPNLDRVLRIKTSSSRGGIIENVFMKNVQVGTFKEAAVKCNMFYEK 405
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 242
P N +P + I ++++ K Q L + + SP T + + N NL+G+ P
Sbjct: 406 PG-----NHIPTIRNIWVENLNVEKGGQYALMVAAYQQSPVTNLRMINCNLKGIKEP 457
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 122/241 (50%), Gaps = 13/241 (5%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP LI F + + I +V+ +NSP W ++P+ C NV I ++IL PADSPNTDGI+
Sbjct: 128 LQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGIN 187
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S SNV I + I GDD +A+K+G ++ P ITI T + +GSE
Sbjct: 188 PESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTMVHGHGAVVLGSE 245
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVG 184
SG + NV + GI +K+ GRGG I +I VS++ ME+ + + G
Sbjct: 246 MSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGTIEDIRVSNIVMEDVICPFILNLYYFCG 305
Query: 185 DHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNIN 235
DK+ NP + P I D+ +V +G + GL I SNI+
Sbjct: 306 PRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNID 365
Query: 236 L 236
+
Sbjct: 366 I 366
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats.
Identities = 84/242 (34%), Positives = 120/242 (49%), Gaps = 18/242 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI F+ + +S V +SPFW IHP+ C NV + V I + PN DG DP++
Sbjct: 212 RPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEAC 269
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I++++ TGDD +A+KSG + G + PS I IR GI +GSE SGG
Sbjct: 270 ENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHGGIVIGSEISGG 329
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDVGDHP 187
+NV AE + + + + +KTN RGG I NI + V + ++ +KI D P
Sbjct: 330 CKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAVVKINLDY--EP 387
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSPFTGICLSNINL 236
++ P V + I+DV K LI G LK+ F GI N+ +
Sbjct: 388 EEPCYRGFEPEVRDVNIEDVTCRKSAYGVLIVGRDSVENVSDIRLKDCVFNGIGRENVRI 447
Query: 237 QG 238
G
Sbjct: 448 TG 449
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP LI F + + I +V+ +NSP W ++P+ C NV I ++IL PADSPNTDGI+
Sbjct: 128 LQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGIN 187
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S SNV I + I GDD +A+K+G ++ P ITI T + +GSE
Sbjct: 188 PESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTMVHGHGAVVLGSE 245
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVG 184
SG + NV + GI +K+ GRGG I +I +S++ ME + + G
Sbjct: 246 MSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRISNIVMEEVICPFILNLYYFCG 305
Query: 185 DHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNIN 235
DK+ NP + P I D+ +V +G + GL I SNI+
Sbjct: 306 PRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNID 365
Query: 236 L 236
+
Sbjct: 366 I 366
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 87/162 (53%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPNLI N +++++ V FQNSP WN+HP+ C N+ +R + I P + N DG D +
Sbjct: 223 FLRPNLIVLNNCKNVLLEGVTFQNSPAWNVHPIMCENLTLRGLFIKNPDYAHNGDGADIE 282
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV +E GDD + +KSG DE G G + + IR T G VGSE S
Sbjct: 283 SCKNVLVEHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRNNTVYKGHGGFVVGSEMS 342
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
GG +N+ GI KT+ GRGG + NI + D+ M
Sbjct: 343 GGAKNIFVYDCTFMGTDKGIRFKTSRGRGGVVENIFIKDINM 384
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP LI F + + I +V+ +NSP W ++P+ C NV I V+IL P DSPNTDGI+
Sbjct: 151 LQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNVSILNPTDSPNTDGIN 210
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S SNV I + I GDD +A+K+G ++ P ITI T + +GSE
Sbjct: 211 PESCSNVRISNCNIDVGDDCIAIKAGTED--TQERIPCENITITNCTMVHGHGAVVLGSE 268
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVG 184
SG + NV + GI +K+ GRGG + +I VS++ ME+ + + G
Sbjct: 269 MSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIVEDIRVSNIVMEDVICPFILNLYYFCG 328
Query: 185 DHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNIN 235
DK+ NP + P I D+ +V +G + GL I SNI+
Sbjct: 329 PRGKDKYVWDKNPYPITDETPCFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNID 388
Query: 236 L 236
+
Sbjct: 389 I 389
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 130/275 (47%), Gaps = 20/275 (7%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P+ ++ R + ++N N+PFW +HPVY NV +R + + D PNTDG+DP++
Sbjct: 188 PSFVQPFRCRRVSLANFSLVNAPFWAVHPVYSENVWVRNLRVNTSWDRPNTDGVDPEACK 247
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
+V +E+ IS GDD VA+K+G D G G S I +RR +S F+GI VGSE SGGV
Sbjct: 248 DVLVENCVISAGDDAVALKTGRDADGWRVGVASENIVVRRNVLASRFNGICVGSEVSGGV 307
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD-K 190
+NV + I VK+N RG F+R + V+ V K +AGD +D K
Sbjct: 308 DNVFFLENRIERAFHAIFVKSNSERGSFVRYVHVAHV------KAYDLAGDCIHFTNDYK 361
Query: 191 FNPNALPVV-NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG-----PTS 244
A P KDV + L SP + + ++ ++ P S
Sbjct: 362 GVRGARPTTFEKFAFKDVICRSAVFAIRATSLAASPIADVTIRDVIVKSTMRTTPDHPVS 421
Query: 245 PPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSNH 279
P+ ++V+ W + L + Q SN
Sbjct: 422 HPVAVANVAN-------WEVANLRVNGQAVDLSNR 449
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 125/250 (50%), Gaps = 21/250 (8%)
Query: 3 RQRTL---PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
+QR + RPN ++ N ++I+I ++ NSP WN++PV C NV I V +++
Sbjct: 208 KQRVFGDGQYLRPNFVQPYNCKNILIEDIRMINSPMWNLNPVLCENVTIERVKVISHG-- 265
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
PN DG DP++ NV I+D Y TGDD +A+KSG DE G G P+ I
Sbjct: 266 PNNDGCDPEACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG 325
Query: 120 GIAVGSETSGGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDV----YMENA 173
G+ +GSE +GG N+ A ++ N+ + +KT+ RGG I N+ + DV Y E A
Sbjct: 326 GVVIGSEIAGGARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAA 385
Query: 174 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ-GLKNSPFTGICLS 232
K GDH +P + + ++++ K + L+ ++SP +
Sbjct: 386 VKFNMFYEKPGDH---------IPTIRNVWVENMHVKKGGRYALMSAAYESSPIKNFRMV 436
Query: 233 NINLQGVAGP 242
N ++ GV P
Sbjct: 437 NCDINGVKEP 446
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 80/241 (33%), Positives = 120/241 (49%), Gaps = 16/241 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI F+ + +S V +SPFW IHP+ C NV + V I + PN DG DP++
Sbjct: 210 RPQLINFVKGNRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEAC 267
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I++++ TGDD +A+KSG + G + PS I IR GI +GSE SGG
Sbjct: 268 ENVLIQNTHFHTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCVMEDGHGGIVIGSEISGG 327
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
+NV AE + + + + +KTN RGG I NI + V + ++ + + ++ P+
Sbjct: 328 CKNVYAEDCTMDSPHLDRVLRIKTNNCRGGRIENINMRRVKVGQCKEAV-VKINLDYEPE 386
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSPFTGICLSNINLQ 237
+ P V + ++DV K LI G LK+ F GI N+ +
Sbjct: 387 EPCYRGFEPEVRDVNVEDVTCRKSAYGVLIVGRDSVENVSDIRLKDCVFNGIGRENVRIT 446
Query: 238 G 238
G
Sbjct: 447 G 447
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 125/236 (52%), Gaps = 18/236 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ +++I V SPFW ++PV C NV + + + PN+DG DP+
Sbjct: 233 YLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPE 290
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +NV I + TGDD +A+KSG + G P S I I + G+ +GSE S
Sbjct: 291 SCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHGGVVIGSEIS 350
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GGVEN+ A+H + ++ GI +KTN RGG ++N+ ++ + + + + G
Sbjct: 351 GGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEG 410
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
D G+ P P++ ITI+++ ++ +++G ++P +G+ L+NI ++
Sbjct: 411 DAGNFP---------PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 21/250 (8%)
Query: 3 RQRTL---PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
+QR + RPN ++ N ++I+I ++ NSP WN++PV C NV I V +++
Sbjct: 208 KQRVFGDGQYLRPNFVQPYNCKNILIEDIKMINSPMWNLNPVLCENVTIERVKVISHG-- 265
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
PN DG DP++ NV I+D Y TGDD +A+KSG DE G G P+ I
Sbjct: 266 PNNDGCDPEACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCIMKDGHG 325
Query: 120 GIAVGSETSGGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDV----YMENA 173
G+ +GSE +GG N+ A ++ N+ + +KT+ RGG I N+ + DV Y E A
Sbjct: 326 GVVIGSEIAGGARNIYALNNKMDSPNLDRILRLKTSSSRGGIIENVFMKDVEVGTYKEAA 385
Query: 174 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ-GLKNSPFTGICLS 232
K GDH +P + + ++++ K + L+ ++SP +
Sbjct: 386 VKFNMFYEKPGDH---------IPTIRNVWVENMHVKKGGKYALMSAAYESSPIKNFRMV 436
Query: 233 NINLQGVAGP 242
N + GV P
Sbjct: 437 NCEINGVKEP 446
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP LI F + + I +V+ +NSP W ++P+ C NV I ++IL PADSPNTDGI+
Sbjct: 128 LQYPRPKLISFDRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSILNPADSPNTDGIN 187
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S SNV I + I GDD +A+K+G ++ ITI T G+ +GSE
Sbjct: 188 PESCSNVRISNCNIDVGDDCIAIKAGTEDTQERIA--CENITITNCTMVHGHGGVVLGSE 245
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVG 184
SG + NV + GI +K+ GRGG I +I VS++ ME + + G
Sbjct: 246 MSGDIRNVTISNCVFKQTDRGIRLKSRRGRGGIIEDIRVSNIVMEEVICPFILNLYYFCG 305
Query: 185 DHPDDKF----NP----NALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNIN 235
DK+ NP + P I D+ +V +G + GL I SNI+
Sbjct: 306 PRGKDKYVWDKNPYPVTDETPSFRRIHFSDITARQVHAAAGFLYGLAEQYIAEITFSNID 365
Query: 236 L 236
+
Sbjct: 366 I 366
>gi|330816973|ref|YP_004360678.1| glycoside hydrolase family protein [Burkholderia gladioli BSR3]
gi|327369366|gb|AEA60722.1| Glycoside hydrolase, family 28 [Burkholderia gladioli BSR3]
Length = 672
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 14/180 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N QN+PFW HP C+NVVIR ++A + PN DG DPD
Sbjct: 340 YLRPCMVEFIGCTNVLMENYHTQNTPFWQHHPTDCTNVVIR--GVMADSIGPNNDGFDPD 397
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ NV + +TGDD +A+KSG D YG P+ ++ T +S GI +GSE
Sbjct: 398 ACRNVLCDGMVFNTGDDCIAIKSGKD-LDTGYG-PAQNHVVQNCTMNSGHGGITLGSEMG 455
Query: 129 GGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
GGVEN+ A ++ + N + + I +KTN+ RGGF+RN V V + N G+ + G
Sbjct: 456 GGVENIYARNLTMLNQFWATNSLNIAIRIKTNMNRGGFVRNFYVDGVSLPN---GVSLTG 512
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 114/238 (47%), Gaps = 8/238 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+LI+ I I +V NSPFW IH + N ++R +I A N DGIDP+
Sbjct: 185 YLRPHLIQLYGCERITIEDVFITNSPFWCIHLLQSENAILR--SIRFDAKLVNNDGIDPE 242
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IED + + GDD VA+KSG D G PS I IR + +GSE S
Sbjct: 243 MSRNVLIEDVHFNNGDDNVAIKSGRDHDGRGTACPSENIIIRNCHFKG-LHAVVLGSEMS 301
Query: 129 GGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
G++NV E+ + G+++KTN RGGFIRNI+ + + I G
Sbjct: 302 AGIQNVYVENCDYAGYCKRGLYIKTNPDRGGFIRNISFKNCEFDEVEDLFYITSMYGGEG 361
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 244
D + IT++++ K + GL+ QG K P I NI + V S
Sbjct: 362 QDN---TFFTDIENITVENIQCRKARAGGLVLQGTKAKPLRNIQFRNITIGEVKNAIS 416
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI + +++I +V NSPFW IHP++C ++++R V + PN DG DP+S
Sbjct: 213 RPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFNRG--PNGDGCDPESC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG ++ G + PS I +R + G+ +GSE SGG
Sbjct: 271 KNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCFMKNGHGGVVIGSEISGG 330
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E+ + ++ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 331 YRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENR 389
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K N P V + +K+V K + LI GL +
Sbjct: 390 EKCNRGYAPTVRNVHLKNVTCEKSKLGVLIIGLDD 424
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 215 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 272
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 273 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGG 332
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENR 391
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 392 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 124/236 (52%), Gaps = 18/236 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ +++I V SPFW ++PV C NV + + + PN+DG DP+
Sbjct: 233 YLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPE 290
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +NV I + TGDD +A+KSG + G P S I I + G+ +GSE S
Sbjct: 291 SCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCEMKAGHGGVVIGSEIS 350
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GGVEN+ A+H + ++ GI +KTN RGG ++N+ ++ + + + + G
Sbjct: 351 GGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEG 410
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
D G P P++ ITI+++ ++ +++G ++P +G+ L+NI ++
Sbjct: 411 DAGKFP---------PLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITIK 457
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 215 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 272
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 273 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGHGGVVIGSEISGG 332
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENR 391
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 392 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 126 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 183
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 184 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGG 243
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 244 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENR 302
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 303 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 337
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 215 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 272
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 273 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGG 332
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENR 391
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 392 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 215 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 272
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 273 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGG 332
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENR 391
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 392 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 215 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 272
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 273 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGG 332
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENR 391
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 392 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 215 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 272
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 273 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGG 332
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENR 391
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 392 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 215 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 272
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 273 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGG 332
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENR 391
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 392 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI + +++I +V NSPFW IHP++C ++++R V + PN DG DP+S
Sbjct: 213 RPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYNRG--PNGDGCDPESC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG ++ G +G PS I +R G+ +GSE SGG
Sbjct: 271 KNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHGGVVIGSEISGG 330
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E+ + ++ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 331 YRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENR 389
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+ N P V + +K+V K + LI GL N
Sbjct: 390 ENCNRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDN 424
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 215 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 272
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 273 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGG 332
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 333 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENR 391
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 392 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 426
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 115/255 (45%), Gaps = 24/255 (9%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q PF RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSIRPFLRPVMVSLIECKNVWLEGVIFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGD 279
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G P + + T G V
Sbjct: 280 GLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCTVFKGHGGFVV 339
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM------------- 170
GSE SGGV NV + VG+ K+ GRGG + NI V +V M
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWVRNVSMIDIATEPVTFNLY 399
Query: 171 -------ENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
E G + +V P D+ P I I+ + +++ G+
Sbjct: 400 YGGKSAVEVLESGEVVPAEVPAMPVDE----TTPCFRNIHIERLTCAGARRAMYFNGIPE 455
Query: 224 SPFTGICLSNINLQG 238
P GI L ++ ++
Sbjct: 456 MPIDGITLKHVRIRA 470
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +I+I V NSPFW IHP++C ++++ VT+ PN DG DP+S
Sbjct: 205 RPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFNRG--PNGDGCDPESC 262
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 263 KNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGHGGVVIGSEISGG 322
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 323 YRNLFVEDCRMDSPNLDRVIRIKTSTCRGGLIENVYVRNVTVGQCREAV-LRINLQYENR 381
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K P+V + +K+V K + LI GL++
Sbjct: 382 EKCKRGFDPIVRNVHLKNVTCEKSKLGVLIIGLED 416
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 121/253 (47%), Gaps = 19/253 (7%)
Query: 2 WRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W +R RP LI F+ + +S V NSPFW IHP+ C NV + V I +
Sbjct: 198 WDERRFGLGYGLRPQLINFVKGNRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWN--E 255
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
PN DG DP++ NV I++++ TGDD +A+KSG + G + PS I IRR
Sbjct: 256 GPNGDGCDPEACENVLIQNTHFHTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCVMEDGH 315
Query: 119 SGIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 176
GI +GSE SGG NV AE + ++ + +KTN RGG I NI V V + ++
Sbjct: 316 GGIVIGSEISGGCMNVFAEDCTMDSPHLDRVLRIKTNNCRGGRIENINVRRVKVGQCKEA 375
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSP 225
+ + ++ P + P V + ++ V K LI G LK+
Sbjct: 376 V-VKINLDYEPQEPCYRGFEPEVRNVNVEQVTCQKSAYGVLIVGRDSVENVSDIRLKDCE 434
Query: 226 FTGICLSNINLQG 238
F GI ++ + G
Sbjct: 435 FNGISKQDVRITG 447
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI + +++I +V NSPFW IHP++C ++++R V + PN DG DP+S
Sbjct: 213 RPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFNRG--PNGDGCDPESC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG ++ G + PS I +R + G+ +GSE SGG
Sbjct: 271 KNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMKNGHGGVVIGSEISGG 330
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E+ + ++ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 331 YRNLFVENCRMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENR 389
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+K N P V + +K+V K + LI GL +
Sbjct: 390 EKCNRGYAPTVRNVHLKNVTCEKSKLGVLIIGLDD 424
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 116/238 (48%), Gaps = 10/238 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F +++ + V NSPFW IHP C NVVIR V + A N DG+DP+
Sbjct: 214 RPQFIQFNRCKNVRMEGVTIINSPFWVIHPYMCHNVVIRNVKVYAHGH--NNDGVDPEMC 271
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IED GDD +A+KSG ++ PS I +R + +A+GSE SGG
Sbjct: 272 ENVLIEDCVFDQGDDAIAIKSGRNQDAWRLNTPSRNIVVRNCLVKNGHQLLAIGSELSGG 331
Query: 131 VENVLAEHINLYNVGVGIH---VKTNIGRGGFIRNITVSDVYMENARKGIK-IAGDVGDH 186
VENV E+ + H +KTN RGG+++N+ V +V + +GI I DV
Sbjct: 332 VENVFLENCTVEENARMFHLVFIKTNERRGGYVKNVYVRNVTADKMSQGILGIDTDVLYQ 391
Query: 187 PDD---KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D + P ++ + + D+ KV I P I L NI ++ + G
Sbjct: 392 WRDLVPTYEKRLTP-ISDVYLTDIKANKVNFLSRILAQDALPVKNIRLKNIRVEQITG 448
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 16/254 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ + +++ VIFQNSP WN+HP+ C NV+I + + P+ + N D
Sbjct: 219 QSVRHFLRPVMVSLIECKNVWFQGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQNGD 278
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G P + + T G V
Sbjct: 279 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV 338
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME----NAR 174
GSE SGGV NV + VG+ K+ GRGG +IRN+++ D+ E N
Sbjct: 339 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNVSMMDIPTEPVTFNLY 398
Query: 175 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
G K A +V G+ K +P + P I I ++ + +++ G+ P
Sbjct: 399 YGGKSAVEVLESGEKIPAKVDPLPVDDTTPCFRNIHISNLVCSNARRALFFNGIPEMPID 458
Query: 228 GICLSNINLQGVAG 241
GI L N+++ G
Sbjct: 459 GITLDNLDITSQIG 472
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI +++I +V NSPFW IHP++C ++++R V I PN DG DP+S
Sbjct: 213 RPQLINLYACSTVLIEDVTLLNSPFWVIHPLFCESLIVRGVNIFNRG--PNGDGCDPESC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG + G + PS I +R + G+ +GSE SGG
Sbjct: 271 KNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGHGGVVIGSEISGG 330
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E+ + N+ I +KT+ RGG I N+ V ++ + R+ + + ++
Sbjct: 331 YRNLFVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNITVGQCREAV-LRINLQYENR 389
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 221
++ N P V + +K+V K + LI GL
Sbjct: 390 EQCNRGFTPTVRNVHLKNVTCQKSRLGVLIIGL 422
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 126/238 (52%), Gaps = 18/238 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ + ++++I V +NSPFW ++PV C NV ++ I + PN+DG DP+
Sbjct: 224 YLRPPFIQPIRCKNVLIEGVTIKNSPFWLVNPVLCENVTVQ--GIHCESYGPNSDGCDPE 281
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ +V I++ TGDD +A+KSG + G G S I I + G+ +GSE S
Sbjct: 282 ACKDVLIQNCIFDTGDDCIAIKSGRNADGRRVGVASENILIENCQMKAGHGGVVIGSEIS 341
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GGV N+ ++ + ++ GI +KTN RGG ++N+ ++ + + I I G
Sbjct: 342 GGVRNLYVDNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVINFYYEEG 401
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
DVG KF PV+ I I+++W ++ ++G ++P TG+ L N+ V
Sbjct: 402 DVG-----KFT----PVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTFVKV 450
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 119/233 (51%), Gaps = 18/233 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ F+ S I+I +V NSPFW +HP+ C ++ + VT+ + PN DG DP++
Sbjct: 214 RPQLVNFVRSERILIKDVKMINSPFWVMHPLLCKDITVDGVTVWN--EGPNGDGCDPEAC 271
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I++ TGDD +A+KSG + G + PS I IR G+ +GSE SGG
Sbjct: 272 ENVLIQNCIFHTGDDCIAIKSGRNNDGRLWNKPSKNIIIRNCRMEDGHGGVVIGSEISGG 331
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 187
ENV AE+ + + + + +KTN RGG I+NI + V + ++ + KI D P
Sbjct: 332 CENVYAENCEMDSPHLERILRIKTNNCRGGLIQNIHMRKVTVGQCKEAVLKINLDY--EP 389
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQG-----------LKNSPFTGI 229
+ P V ++++DV K LI G +KN F G+
Sbjct: 390 REACYRGFEPTVRNVSMEDVTCQKSNYGVLIIGGNKVENVYDIHVKNCKFDGV 442
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 120/254 (47%), Gaps = 16/254 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 279
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G G + + T G V
Sbjct: 280 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFVV 339
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME----NAR 174
GSE SGGV NV + VG+ K+ GRGG +IRNI + D+ E N
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAMMDIPTEPITFNLY 399
Query: 175 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
G K A +V G+ K P P I +K++ +++ G+ P
Sbjct: 400 YGGKSAVEVLESGEKVLAKVEPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMPID 459
Query: 228 GICLSNINLQGVAG 241
GI L +I++ G
Sbjct: 460 GIVLEDIDITSKLG 473
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 126/240 (52%), Gaps = 18/240 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN ++F +SR+I++ V +NSP W IHPV N+ + V + +P + PN DG++P+SS
Sbjct: 226 RPNFVQFYDSRNILVQGVTLKNSPMWMIHPVLSHNITVDGVVLDSP-EGPNNDGVNPESS 284
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I++S GDD +A+KSG + G G PS I I G+ +GSE SG
Sbjct: 285 RDVVIKNSRFDNGDDCIAIKSGRNADGRRIGVPSENILIENNHMQDGHGGVVMGSEMSGS 344
Query: 131 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVS-DVYMENARKGIKI-----AGD 182
V NV A+H ++ N+ + +KTN RGG + N+ + +E + I++ D
Sbjct: 345 VRNVFAQHNVMDSPNLHRALRIKTNSVRGGIVENVYFRHNTVVEIGDEVIRVNFFYEEAD 404
Query: 183 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
G H P+V I I+D+ + + ++G + SP + + +++ GV P
Sbjct: 405 SGPH---------TPIVRNIHIEDLRSDNGEYALYLRGYERSPVSNVTVTDSVFTGVEHP 455
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
++++ +L + RPNL+ F + + I V +SP W +HP C NV I V+I+ PA+SP
Sbjct: 125 LFKEDSLAYPRPNLVSFDHCERVHIEQVKMIDSPSWTVHPNDCDNVTISGVSIVNPANSP 184
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S NV I D I GDD +A+K+G ++ A P ITI T G
Sbjct: 185 NTDGINPESCRNVKISDCSIDVGDDCIAIKAGTEDAERAI--PCENITITNCTMLHGHGG 242
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI- 179
+ GSE SG + NV+ + GI K+ GRGG I NI V+++ M N +
Sbjct: 243 VVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNVICPFILN 302
Query: 180 ----AGDVGDHP---DDKFNP-NAL-PVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGI 229
G G P D + P AL P I ++ T V +G + GL P I
Sbjct: 303 LYYYHGPRGMEPYVWDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEMPVEDI 362
Query: 230 CLSNINL 236
S+I +
Sbjct: 363 TFSHIRI 369
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP LI F S I IS++ SP W +HP+ C +V I+ ++IL PADSPNTDGID
Sbjct: 130 LAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVTIQNISILNPADSPNTDGID 189
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S N+ I + I GDD +A+KSG ++ + ITI T + +GSE
Sbjct: 190 PESCKNLRILNCNIDVGDDCIAIKSGTEQTTTS-KSACENITISNCTMVHGHGAVVLGSE 248
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD--VG 184
S + NV + GI +KT GRGG + NITVS + ME+ I G
Sbjct: 249 MSRNIRNVTISNCVFQQTDRGIRMKTRRGRGGVVENITVSTIVMEDVLCPFVINAYYFCG 308
Query: 185 DHPDDKF----NP----NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNIN 235
+K+ NP P I ++ KV+ + G I GL P + +NI
Sbjct: 309 PKGKEKYVWDKNPYPITKETPCFRSIHFSNIVAKKVRAAEGFIYGLPEMPVQDVSFTNIQ 368
Query: 236 LQ 237
++
Sbjct: 369 IE 370
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 122/250 (48%), Gaps = 35/250 (14%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ I+ +S++I+I V NSP W I+PV N++I V I+ PN DG+DP+
Sbjct: 210 YLRPSFIQPYHSKNIMIKGVTILNSPMWQINPVLSENILIDDVKIIG--HGPNNDGVDPE 267
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS NV I+DSY GDD +A+KSG + G PS I I G+ +GSE S
Sbjct: 268 SSKNVLIKDSYFDNGDDCIAIKSGRNADGRRINVPSENIIIEGNEMKDGHGGVVIGSEIS 327
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVS--------------DVYMEN 172
G V NV A+H ++ N+ + +KTN RGG I +I S D+Y E
Sbjct: 328 GSVRNVFAQHNVMDSPNLDRALRIKTNSVRGGTIEDIDFSNNTVKSVGSEVIQIDMYYE- 386
Query: 173 ARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 232
GD G N PVV I I+++ + I+ + SP T + +
Sbjct: 387 -------EGDTG---------NFTPVVRNINIENLQSNGGKYGLWIRAYERSPVTNLTIR 430
Query: 233 NINLQGVAGP 242
+ N Q VA P
Sbjct: 431 HSNFQHVATP 440
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 122/244 (50%), Gaps = 19/244 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ R + I+ ++I+I V ++SP W IHPV C NV++R V I+ PNTDG++P+
Sbjct: 210 YLRSSFIQPYQCQNILIEGVTVKDSPMWQIHPVLCENVIVRGVNIIG--HGPNTDGVNPE 267
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IED Y GDD +A+KSG +E G G PS I IRR G+ +GSE S
Sbjct: 268 SCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNEMRDGHGGVTIGSEIS 327
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------A 180
GGV V AE ++ N+ + +KTN RGG I +I + +++ + +
Sbjct: 328 GGVRYVYAEDNIMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEE 387
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G H PVV I ++ + + + I +SP T + + + V
Sbjct: 388 GDAGPHK---------PVVRHIEVEGLKSSGGRYGVKIAAYPHSPVTHFKMKDCVIDDVT 438
Query: 241 GPTS 244
P S
Sbjct: 439 YPLS 442
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 126/243 (51%), Gaps = 19/243 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN ++ +++I +V NSP W IHPV NV +R VT+++ N DG +P+
Sbjct: 217 FLRPNFLQPYRCDNVLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVS--HGSNNDGCNPE 274
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS +V IE+ TGDD +A+KSG + G PS I +R G+ +GSE S
Sbjct: 275 SSKDVLIENCVFDTGDDCIAIKSGRNNDGRRVNVPSENIIVRNCKMKDGHGGVVIGSEIS 334
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKI-----A 180
GGV NV E+ + N+ + +KTN RGG I N+ V DV + + IK+
Sbjct: 335 GGVRNVFVENCEMSSPNLDRALRIKTNSIRGGLIENVFVRDVEVGVVKDSVIKVNFLYEE 394
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD GD PVV + ++ + + + + ++G +++P TGI L + +GV
Sbjct: 395 GDAGDFA---------PVVRNVVVRRLTSRESKYALFLKGYEHTPITGIRLIDCQFEGVQ 445
Query: 241 GPT 243
P+
Sbjct: 446 RPS 448
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 22/264 (8%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R+ T RPN ++F S I++S V NSP W IHPV NV++ VT+ +P D PN+
Sbjct: 215 RRFTDSKLRPNFVQFYRSSDILVSGVTLTNSPMWMIHPVLSENVIVDGVTLDSP-DGPNS 273
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DG++P+SS NV I +S GDD +A+KSG + G G PS I I G+
Sbjct: 274 DGVNPESSRNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHDNRMFDGHGGVV 333
Query: 123 VGSETSGGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKI 179
+GSE SG V NV AE ++ + + +KTN RGG + + D + E A I++
Sbjct: 334 IGSEMSGDVRNVFAERNVMDSPRLDRALRIKTNSVRGGTVEGVYFRDNDIPEVADAVIRV 393
Query: 180 -----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
GD GD P V G+ I++V + + ++G + SP T + + +
Sbjct: 394 NFHYEEGDTGD---------FTPTVRGLHIENVHSVGGEFALYLRGYERSPVTDVTIRDS 444
Query: 235 NLQGVAGPTSPPLKCSDVSGSAYQ 258
V + P+ V G A +
Sbjct: 445 TFSEV----TTPMLLEHVRGLALE 464
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 16/242 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ S++++I++V N+PFWNI+PV C NV +R V ++ PN DG DP+
Sbjct: 216 YLRPPFIQPYLSKNVLIADVKIINAPFWNINPVLCENVTVRNVKVVT--HGPNNDGCDPE 273
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I Y TGDD +A+KSG +E G P+ I G+ +GSE S
Sbjct: 274 SCKNVLITGCYFDTGDDCIAIKSGRNEDGRNIARPAENHIIENCEMKDGHGGVVIGSEIS 333
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GG N+ A+++ + N+ + +KT+ RGG I N+ + +V + ++ + +
Sbjct: 334 GGARNIFAQNLIMDSPNLDRILRLKTSSLRGGIIENVYMRNVEVGTYKEAAILCDMFYEK 393
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQGVAGP 242
P D LP + I+++++ ++Q G LI K SP + +SN + GV P
Sbjct: 394 PGD-----FLPTIRNISVENL---NIKQGGKFGVLINAYKESPVENLRISNSTINGVKIP 445
Query: 243 TS 244
Sbjct: 446 VQ 447
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 124/237 (52%), Gaps = 7/237 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ +EF N ++++ ++ ++SPFWNIHPV NV++R V ++ PN DG +P+
Sbjct: 215 YLRPSFVEFYNCENVLVEDIHLKDSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNPE 272
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S ++ IE+ Y TGDD +A+KSG + G PS I IR + G+ +GSE S
Sbjct: 273 SVDHMLIENCYFDTGDDCIAIKSGRNADGRRVAVPSENILIRNCQMKAGHGGVVIGSEIS 332
Query: 129 GGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
G V NV AE ++ ++ + +K N RGG + NI + ++ + + + I +
Sbjct: 333 GDVFNVYAEGCAMDSPDLWYMLRIKNNAMRGGVVENIHLRNIEVGQVARAVMIC---DFN 389
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
++ N PV+ ++++ + K + QG + I L + GV+ P+
Sbjct: 390 YEEGINGPFTPVLRNVSMQSIAVKKAVRVLDSQGFAKAEIENISLKDCIFNGVSSPS 446
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 26/240 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++ +++++ V NSP W ++PV C NV I VT+ + PN+DG DP+
Sbjct: 221 YLRPQFVQPYRCKNVLVEGVKIVNSPMWILNPVLCENVTIEGVTV--ESHGPNSDGCDPE 278
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS NV I+D Y +TGDD +A+KSG + G PS I I+ + G+ +GSE S
Sbjct: 279 SSKNVLIKDCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCKMADGHGGVVIGSEIS 338
Query: 129 GGVENVLAE--HINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAG 181
GGV NV AE +N ++ + +KT+ RGG ++RNI V + + R +
Sbjct: 339 GGVRNVFAENCEMNSPHLDRALRIKTSSMRGGIIEDIYLRNIDVGQIAQQVVRVNM-FYE 397
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQ 237
D G + +P V I ++++ V+ G L++G +NSP I L N+N++
Sbjct: 398 DSGAY---------VPTVRNIHVENM---TVENGGKVGVLLEGYENSPVENITLENVNIK 445
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 8/238 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP LI+ R++ I V NSPFW IH + NV+ R + A N DGIDP+
Sbjct: 207 WLRPQLIQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICR--GLRYDAKLVNNDGIDPE 264
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS NV IED GDD VA+KSG D G + HPS I IRR + +GSE S
Sbjct: 265 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCRFKG-LHAVVIGSEMS 323
Query: 129 GGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
GGV NV E + G+++KTN RGG+++NI + D + I + +
Sbjct: 324 GGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYA 380
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 244
+ V + + V K + +G++ QG K P + + + + V S
Sbjct: 381 GEGLGSRHFSEVEHLLVDGVSCRKARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNAVS 438
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 219 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 278
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G + + T G V
Sbjct: 279 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCTVFKGHGGFVV 338
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NAR 174
GSE SGGV NV + VG+ K+ GRGG + NI V +V M N
Sbjct: 339 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVRNVSMMDIPTEPVTFNLY 398
Query: 175 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
G K A +V G+ K +P P I I ++ + +++ G+ P
Sbjct: 399 YGGKSAVEVLESGEKVPLKVDPLPVDETTPCFRNIHISNLVCSNARRALFFNGIPEMPID 458
Query: 228 GICLSNINLQGVAG 241
GI L N+++ G
Sbjct: 459 GITLENLDITSQIG 472
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + N+ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKNIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-----KGIKIA 180
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFC 300
Query: 181 GDVGDHP---DDKFNP--NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNI 234
G G P + K P P I ++ V S G I GL I NI
Sbjct: 301 GPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNI 360
Query: 235 NL 236
++
Sbjct: 361 DV 362
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI FM+ I+I +V NSPFW IHP+ N+ + V I + PN DG DP++
Sbjct: 210 RPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEAC 267
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I++ TGDD +A+KSG + G +G PS I IR G+ +GSE SGG
Sbjct: 268 ENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVVIGSEISGG 327
Query: 131 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 187
ENV AE +++ + + +KTN RGG I+NI + +V + ++ + KI D P
Sbjct: 328 CENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAVLKINLDY--EP 385
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 239
+ P V + +++V K + L+ GL I +SN GV
Sbjct: 386 REACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVENVYDINVSNCKFDGV 438
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 6/232 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI FM+ I+I +V NSPFW IHP+ N+ + V I + PN DG DP++
Sbjct: 200 RPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEAC 257
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I++ TGDD +A+KSG + G +G PS I IR G+ +GSE SGG
Sbjct: 258 ENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVVIGSEISGG 317
Query: 131 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
ENV AE +++ + + +KTN RGG I+NI + +V + ++ + + ++ P
Sbjct: 318 CENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPR 376
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 239
+ P V + +++V K + L+ GL I +SN GV
Sbjct: 377 EACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVENVYDINVSNCKFDGV 428
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 6/232 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI FM+ I+I +V NSPFW IHP+ N+ + V I + PN DG DP++
Sbjct: 230 RPQLINFMHCERILIRDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEAC 287
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I++ TGDD +A+KSG + G +G PS I IR G+ +GSE SGG
Sbjct: 288 ENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCKMEDGHGGVVIGSEISGG 347
Query: 131 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
ENV AE +++ + + +KTN RGG I+NI + +V + ++ + + ++ P
Sbjct: 348 CENVYAEDCYMDSPELERVLRIKTNNCRGGLIQNINMRNVKVGQCKEAV-LKINLDYEPR 406
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGV 239
+ P V + +++V K + L+ GL I +SN GV
Sbjct: 407 EACYRGFQPTVRNVNMENVTCGKSEYGVLVIGLNEVENVYDINVSNCKFDGV 458
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 24/241 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ ++++I +V N+P WN+HPV C NV + V I PN DG DP+
Sbjct: 220 FMRPQFVQPFECKNVLIQDVKLINAPMWNLHPVLCENVTVERVKI--ETLGPNNDGCDPE 277
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ NV I+D Y TGDD +A+KSG +E G G PS I I G+ +GSE S
Sbjct: 278 ACKNVLIKDCYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCEMKEGHGGVVIGSEIS 337
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDV----YMENARKGIKIAGD 182
GG NV A+++ + N+ + +KT+ RGG + NI + DV Y E A + +
Sbjct: 338 GGARNVFAQNLVMDSPNLDRVLRIKTSSKRGGTVENIYMRDVVVGTYREAAVRFNMFYEE 397
Query: 183 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQG 238
GDH +P + + ++++ +V+ G + ++SP T + N +
Sbjct: 398 EGDH---------IPTIRNVIVENL---QVKNGGKYAVMANAYESSPVTNFQMINCRIDS 445
Query: 239 V 239
V
Sbjct: 446 V 446
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV++ V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGD 279
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G P + + T G V
Sbjct: 280 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV 339
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NAR 174
GSE SGGV NV + VG+ K+ GRGG + NI +++V M N
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFNLY 399
Query: 175 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
G K A +V G+ K P P I +K++ +++ G+ P
Sbjct: 400 YGGKSAVEVLESGEKVPAKVEPLPVDETTPCFRNIHVKNLICAGARRALFFNGIPEMPIE 459
Query: 228 GICLSNINLQGVAG 241
+ L +I++ G
Sbjct: 460 NVVLEDIDITSRLG 473
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 21/244 (8%)
Query: 3 RQRTLP---FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
R+R F RP ++F + + I++ + N+PFW IHPV +V IR V +
Sbjct: 215 RERVFADGGFLRPPFLQFYDCQRILVEGIKITNAPFWLIHPVLSRDVTIRGVH--CQSYG 272
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
PN+DG DP+S V IED TGDD +A+KSG + G G P + ++
Sbjct: 273 PNSDGCDPESCERVVIEDCVFDTGDDCIALKSGRNADGRRIGVPCKDVVVQNCHMKEGHG 332
Query: 120 GIAVGSETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
G+ +GSE SGGV NV H + ++ I +KTN RGG I ++ S + + + +
Sbjct: 333 GVVIGSEISGGVANVHVRHCTMDSPHLERAIRIKTNAQRGGLIEHLRYSKITIGSVKDVF 392
Query: 178 KI-----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 232
I GD G +P+V I I D+ K Q+ ++G SP T + L
Sbjct: 393 VINFYYEEGDRG---------KWMPLVRDIEITDLTVAKAQRVFNLRGFPQSPITDVSLR 443
Query: 233 NINL 236
N N+
Sbjct: 444 NWNV 447
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ + R++ + VIFQNSP WN+HP+ C NV++ V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECRNVWLQGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQNGD 279
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G + + T G V
Sbjct: 280 GLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCTVFKGHGGFVV 339
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NAR 174
GSE SGGV NV + VG+ K+ GRGG + NI V++V M N
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWVTNVSMMDIPTEPITFNLY 399
Query: 175 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
G K A +V G+ K P P I ++++ +++ G+ P
Sbjct: 400 YGGKSAVEVLESGETVPAKVEPLPVDETTPCFRNIHVRNLVCAGARRALFFNGIPEMPID 459
Query: 228 GICLSNINLQGVAG 241
GI L +I++ G
Sbjct: 460 GIVLEDIDITSRLG 473
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 113/238 (47%), Gaps = 8/238 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP LI+ R++ I V NSPFW IH + NV+ R + A N DGIDP+
Sbjct: 195 WLRPQLIQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICR--GLRYDAKLVNNDGIDPE 252
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS NV IED GDD VA+KSG D G + HPS I IRR + +GSE S
Sbjct: 253 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCRFKG-LHAVVIGSEMS 311
Query: 129 GGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
GGV NV E + G+++KTN RGG+++NI + D + I + +
Sbjct: 312 GGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYA 368
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 244
+ V + + V + + +G++ QG K P + + + + V S
Sbjct: 369 GEGLGSRHFSEVEHLLVDGVSCRRARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNAVS 426
>gi|161519770|ref|YP_001583197.1| glycoside hydrolase family protein [Burkholderia multivorans ATCC
17616]
gi|189354051|ref|YP_001949678.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
gi|160343820|gb|ABX16905.1| glycoside hydrolase family 28 [Burkholderia multivorans ATCC 17616]
gi|189338073|dbj|BAG47142.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
Length = 665
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTT--NSIGPNNDGFDPD 390
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 179 IAG 181
+ G
Sbjct: 503 LKG 505
>gi|221200600|ref|ZP_03573641.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
gi|221208427|ref|ZP_03581429.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221171615|gb|EEE04060.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221179172|gb|EEE11578.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
Length = 665
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTT--NSIGPNNDGFDPD 390
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 179 IAG 181
+ G
Sbjct: 503 LKG 505
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 16/254 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 279
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G G + + T G V
Sbjct: 280 GLDLESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCTVFKGHGGFVV 339
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME----NAR 174
GSE SGGV NV + VG+ K+ GRGG +IRNI++ D+ E N
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPITFNLY 399
Query: 175 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
G K A +V G+ K P P I ++++ +++ G+ P
Sbjct: 400 YGGKSAVEVLESGEVVPAKVEPMPVDETTPCFRNIHVENLVCAGARRALFFNGIPEMPID 459
Query: 228 GICLSNINLQGVAG 241
GI L N+++ G
Sbjct: 460 GITLKNVDISSKLG 473
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 119/254 (46%), Gaps = 16/254 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV++ V + P+ + N D
Sbjct: 230 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQNGD 289
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G P + + T G V
Sbjct: 290 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCTVFKGHGGFVV 349
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME---------NAR 174
GSE SGGV NV + VG+ K+ GRGG + NI +++V M N
Sbjct: 350 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGIVENIWITNVSMMDIPTEPITFNLY 409
Query: 175 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
G K A +V G+ K +P P I +K++ +++ G+ P
Sbjct: 410 YGGKSAVEVLESGEKVPAKVDPLPVDETTPCFRNIHVKNLVCAGARRALFFNGIPEMPIE 469
Query: 228 GICLSNINLQGVAG 241
+ L ++++ G
Sbjct: 470 NVVLEDVDITSRLG 483
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 21/240 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPNL+ N + I++S FQNS W +HP + I+ +T+ P + N DG+D D
Sbjct: 196 YLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDID 255
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S V +E+S GDD + +KSG +E G G PS I+IR T GI VGSE S
Sbjct: 256 SCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGGIVVGSEMS 315
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV----- 183
GG+++V +GI K+ GRGG + NI + + M + I GD
Sbjct: 316 GGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRD------IDGDAISFNL 369
Query: 184 --------GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
G++ ++ P PV I I+D+ + + LI GL P + +
Sbjct: 370 YYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENLTVKR 429
>gi|421478826|ref|ZP_15926555.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
gi|400223986|gb|EJO54252.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
Length = 665
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTT--NSIGPNNDGFDPD 390
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 179 IAG 181
+ G
Sbjct: 503 LKG 505
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 121/247 (48%), Gaps = 13/247 (5%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
++++ L + RPNL+ F + + + V +SP W +HP C NV I V+I+ PA+SP
Sbjct: 124 LFKEDALAYPRPNLVSFDHCERVHVEQVKMIDSPSWTVHPNDCDNVTISAVSIVNPANSP 183
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGI+P+S NV I D I GDD +A+KSG ++ P ITI T G
Sbjct: 184 NTDGINPESCRNVRISDCSIDVGDDCIAIKSGTEDAERVI--PCENITITNCTMLHGHGG 241
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI- 179
+ GSE SG + NV+ + GI K+ GRGG I NI V+++ M N +
Sbjct: 242 VVFGSEMSGDIRNVVVSNCIFEGTDRGIRFKSRRGRGGTIENIRVNNIVMNNIICPFILN 301
Query: 180 ----AGDVGDHP---DDKFNP-NAL-PVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGI 229
G G P D + P AL P I ++ T V +G + GL P I
Sbjct: 302 LYYYHGPRGMEPYVSDKEVQPVTALTPKFRHIHFSNITATDVTAAAGFMYGLPEMPVEDI 361
Query: 230 CLSNINL 236
S+I +
Sbjct: 362 TFSHIRI 368
>gi|421472155|ref|ZP_15920382.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
gi|400223840|gb|EJO54116.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
Length = 615
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 283 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTTN--SIGPNNDGFDPD 340
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V ED +TGDD +A+KSG + EYG A H +R T +S GI +GS
Sbjct: 341 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTEYGPAKRH-----LVRNCTMNSGHGGITLGS 395
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 396 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 452
Query: 179 IAG 181
+ G
Sbjct: 453 LKG 455
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 113/238 (47%), Gaps = 8/238 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP LI+ R++ I V NSPFW IH + NV+ R + A N DGIDP+
Sbjct: 195 WLRPQLIQLFGCRNVTIEGVKIINSPFWCIHLLQSENVICR--GLRYDAKLVNNDGIDPE 252
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS NV IED GDD VA+KSG D G + HPS I IRR + +GSE S
Sbjct: 253 SSRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCRFKG-LHAVVIGSEMS 311
Query: 129 GGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
GGV NV E + G+++KTN RGG+++NI + D + I + +
Sbjct: 312 GGVRNVFVEDCDFAGYCKRGLYIKTNPDRGGYVKNIYMKDCRFDEVEDLIYV---TSMYA 368
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQGVAGPTS 244
+ V + + V + + +G++ QG K P + + + + V S
Sbjct: 369 GEGLGSRHFSEVEHLLVDGVSCRRARAAGIVLQGTKAKPIRDVTIRRVEIGEVKNAVS 426
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ + +++I ++ NSPFW IHP++C ++ +R V + PN DG DP+S
Sbjct: 234 RPQLVNLYSCNTVLIEDITLLNSPFWVIHPLFCESLTVRGVKVFNRG--PNGDGCDPESC 291
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG + G + PS I +R + G+ +GSE SGG
Sbjct: 292 KNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMKNGHGGVVIGSEISGG 351
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E+ + N+ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 352 YRNLYVENCQMDSPNLDRVIRIKTSTCRGGIIENVFVRNVTVGQCREAV-LRINLQYENR 410
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGL 221
+K + + PVV + +K+V K + LI GL
Sbjct: 411 EKCDRSFPPVVRNVHLKNVTCEKSKLGILIIGL 443
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 20/265 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPNLI + +++ V FQNS W +HP+ ++ +R VT+ P + N DGID +
Sbjct: 214 FLRPNLIVLTKCKKVLLEGVTFQNSAAWCLHPLMSEDLTVRNVTVKNPWFAQNGDGIDVE 273
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + V IE+S GDD + +KSG DE G G P+ + IR G +GSE S
Sbjct: 274 SCNRVLIENSSFDVGDDGLCMKSGRDEAGRKRGMPTENVIIRDCKVYHAHGGFVIGSEMS 333
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GG N+ + +G+ KT GRGG + NI +D+ M + +
Sbjct: 334 GGARNIWVNNCTFIGTDIGLRFKTTRGRGGIVENIYCNDIQMIDIPGEAILFDMYYMSVD 393
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ +AG+ + P + P P +K+V + ++G+ + L N
Sbjct: 394 PVALAGEKRELPKVEKLPVDEGTPQFRNFVVKNVVCNGAAKGIFLRGIPEMHVKDVLLEN 453
Query: 234 INLQGVAGPTSPPLKCSDVSGSAYQ 258
LQ G + C + SG ++
Sbjct: 454 CILQARKG-----IDCQEASGITFK 473
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 5/216 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI + +++I +V NSPFW IHP++C ++ +R V + PN DG DP+S
Sbjct: 213 RPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRG--PNGDGCDPESC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG ++ G +G PS I +R G+ +GSE SGG
Sbjct: 271 KNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCYMKKGHGGVVIGSEISGG 330
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E+ + ++ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 331 YRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENR 389
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS 224
+ N P V + +K+V K + LI GL ++
Sbjct: 390 ENCNRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDDN 425
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 5/215 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI + +++I +V NSPFW IHP++C ++ +R V + PN DG DP+S
Sbjct: 213 RPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYNRG--PNGDGCDPESC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG ++ G +G PS I +R G+ +GSE SGG
Sbjct: 271 KNVLIENCTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCYMKKGHGGVVIGSEISGG 330
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E+ + ++ I +KT+ RGG I N+ V +V + R+ + + ++
Sbjct: 331 YRNLYVENCKMDSPDLDRVIRIKTSTCRGGLIENVFVRNVTVGQCREAV-LRINLQYENR 389
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN 223
+ N P V + +K+V K + LI GL +
Sbjct: 390 ENCNRGFTPTVRNVHLKNVTCEKSKLGVLIIGLDD 424
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 124/252 (49%), Gaps = 21/252 (8%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--NTDGIDPD 68
RP +++F R++++S++ + P W +HPV SNV +R VT+ DS NTDG DP+
Sbjct: 223 RPKMVQFYRCRNVLVSDLTIVDPPMWTVHPVLSSNVTVRGVTV----DSTLYNTDGCDPE 278
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S+V I +T DD VAVKSG DE G G PS I +R S + G+ VGSE S
Sbjct: 279 CCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCQFSGRWGGMTVGSEMS 338
Query: 129 GGVENVLAEHINL--------YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
GGV ++ AE+ + Y V ++VK N RGGFI + + + ++ + I
Sbjct: 339 GGVRDIFAENCEINPPDFPGRYPVKHALYVKANKKRGGFIDGVHIRNFTGQDVERDIAFV 398
Query: 181 GDVGDHPDDKFNPNALPV-VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ +D LPV V I + + Q + GL G+ LS G+
Sbjct: 399 TMAYNGGED----GTLPVSVRNIHMDRMAIDGAQTVLRLVGLDTDHLRGVRLSRSTFTGI 454
Query: 240 AGPTSPPLKCSD 251
P S + C+D
Sbjct: 455 LNPDS--IACTD 464
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 112/240 (46%), Gaps = 21/240 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPNL+ N + I++S FQNS W +HP + I+ +T+ P + N DG+D D
Sbjct: 196 YLRPNLLSLRNCKRILLSGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDID 255
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S V +E+S GDD + +KSG +E G G PS I IR T GI VGSE S
Sbjct: 256 SCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCTVYHGHGGIVVGSEMS 315
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV----- 183
GG+++V +GI K+ GRGG + NI + + M + I GD
Sbjct: 316 GGIKDVYVSDCTFIGTDIGIRFKSCRGRGGVVENILIERIRMRD------IDGDAISFNL 369
Query: 184 --------GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
G++ ++ P PV I I+D+ + + LI GL P + +
Sbjct: 370 YYEGKAGSGEYQEEVMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENLTVKR 429
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R+ L RP LI + I +V +NSP W +HP C +V + + I PA+SPNT
Sbjct: 121 RREELAHPRPTLIGLHECERVTIRDVALRNSPAWTVHPSLCEDVTLTNLHIHNPAESPNT 180
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DGIDP+S NV I D +I GDD +A+K+G + + +TI T G+
Sbjct: 181 DGIDPESCRNVRISDCHIDVGDDCIALKAGTERTPDRVA--TENVTITGCTMVRGHGGVV 238
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI--- 179
+GSE SGGV NV+ + GI +KT RGG + N+ VS + M++ + +
Sbjct: 239 IGSEMSGGVRNVVISNCVFQGADRGIRLKTRRDRGGTVENVRVSTIVMDDVLCPLTVNPF 298
Query: 180 --AGDVGDHP---DDKFNP--NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICL 231
G G P D P P + + + + T V S G + GL +P + L
Sbjct: 299 YFCGPDGKEPHVGDRTARPVDAGTPHLRSLHLSHLTATNVHASAGHVFGLPEAPLSDFSL 358
Query: 232 SNINL 236
++++
Sbjct: 359 HDVSI 363
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTT--NSIGPNNDGFDPD 390
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 445
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N
Sbjct: 446 EMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN 499
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 335 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 392
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 393 ACTDVLCEDCTFNTGDDCIAIKSGKDRDVEYGPAKRH-----LIRNCTMNSGHGGITLGS 447
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 448 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN---GVT 504
Query: 179 IAG 181
+ G
Sbjct: 505 LKG 507
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 101/174 (58%), Gaps = 17/174 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTT--NSIGPNNDGFDPD 390
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 445
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N
Sbjct: 446 EMGGGVEQIYASNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN 499
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 9/239 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ I+F+N + + + + ++ P W IHPVYC +VV+R VT+ PNTDG +PDS
Sbjct: 146 RPSFIQFINCKHVTLEDFTIEDGPQWTIHPVYCEDVVVRGVTV--NTKGPNTDGCNPDSC 203
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V IED TGDD +A+ SG +E G G P I ++ + +A+GS SGG
Sbjct: 204 RKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCEQIEVKNCRFIGGHAAVAIGSGMSGG 263
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-GIKIAGDVGDHPDD 189
+ ++ GI +K+ GRGG+++ + V + M+ K I+++ + G
Sbjct: 264 ICDIWIHDCVARGTERGIRIKSMRGRGGYVKRVNVERMQMDEIEKEAIEVSMNYGSSTAV 323
Query: 190 KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
+ A P + + + G + GL SP L I L+ V+ PL+
Sbjct: 324 PVSQKA-PEFSELRFAHIRGNHAAIGVSLCGLPESP-----LREITLEDVSIAAEDPLR 376
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 125/243 (51%), Gaps = 22/243 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN ++ S++ +++V+ +NSP WN++PV C NV+I V +++ PN DG DP+
Sbjct: 212 YLRPNFVQPYKSKNFYMADVLVKNSPMWNLNPVLCENVLIERVKVISHG--PNNDGFDPE 269
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ NV I+DSY TGDD +A+KSG DE G G P+ I G+ +GSE +
Sbjct: 270 ACKNVWIKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIENCEMKDGHGGVVIGSEIA 329
Query: 129 GGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GG +N+ A ++ N+ + +KT+ RGG I N V+ N + G V
Sbjct: 330 GGAKNIYAIGNVMDSKNLERALRIKTSSNRGGIIEN-----VFFYNTKVGAYKEAAV--- 381
Query: 187 PDDKFNPNALPVVNGI-TIKDVW--GTKVQQSG----LIQGLKNSPFTGICLSNINLQGV 239
+FN + N I TI+++W V++ G L ++SP T + N + V
Sbjct: 382 ---RFNMHYEKPGNFIPTIRNIWVENLTVEKGGKYAILSDAYESSPVTDFTMVNAKINNV 438
Query: 240 AGP 242
P
Sbjct: 439 EIP 441
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 125/236 (52%), Gaps = 18/236 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ +++I V SPFW ++PV C NV + + + PN+DG DP+
Sbjct: 233 YLRPPFIQPYRCENVLIEGVTILRSPFWLVNPVLCKNVTVN--DVYCKSFGPNSDGCDPE 290
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +NV I + TGDD +A+KSG + G P S I I + G+ +GSE S
Sbjct: 291 SCTNVIISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIIIEHCEMKAGHGGVVIGSEIS 350
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GGVEN+ A++ + ++ GI +KTN RGG ++N+ ++ + + + + G
Sbjct: 351 GGVENLYAQYCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYEEG 410
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
D G+ P P++ ITI+++ ++ +++G ++P +G+ L+N+ ++
Sbjct: 411 DAGNFP---------PLLEDITIENLNVVSANRAFVLRGYDHTPISGLTLNNVTIK 457
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 19/244 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ R + I+ N ++I+I V ++SP W +HPV NV++R V I+ PNTDG++P+
Sbjct: 210 YLRSSFIQPYNCQNILIEGVTVKDSPMWQVHPVLSENVIVRGVNIIGHG--PNTDGVNPE 267
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +V IED Y GDD +A+KSG +E G G PS I IRR T G+ +GSE S
Sbjct: 268 SCRHVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRRNTMRDGHGGVTIGSEIS 327
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------A 180
GGV+ V AE ++ N+ + +KTN RGG I +I + +++ + +
Sbjct: 328 GGVKYVYAEDNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNLVKSLKHEVVCIDMMYEE 387
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G H PVV I ++ + + + I +SP T + + + V
Sbjct: 388 GDAGPHR---------PVVRHIEVEGLKSSGGRYGVKIAAYSHSPVTHFKMKDCVIDDVT 438
Query: 241 GPTS 244
P S
Sbjct: 439 YPLS 442
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 112/236 (47%), Gaps = 21/236 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPNL+ N + I+++ FQNS W +HP + I+ +T+ P + N DG+D D
Sbjct: 195 YLRPNLLSLRNCKRILLNGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDID 254
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S V +E+S GDD + +KSG +E G G PS I+IR T GI VGSE S
Sbjct: 255 SCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCTVYHGHGGIVVGSEMS 314
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV----- 183
GG+++V N +GI K+ GRGG + NI + + M +I GD
Sbjct: 315 GGIKDVHVSDCNFIGTDIGIRFKSCRGRGGVVENIFIERIRMR------EIDGDAISFNL 368
Query: 184 --------GDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 229
G++ + P PV I I+D+ + + LI GL P +
Sbjct: 369 YYEGKAGSGEYQAEAMLPVTEETPVFRNIVIQDIVCSGAHTALLINGLPEMPVENV 424
>gi|323529874|ref|YP_004232026.1| glycoside hydrolase family 28 [Burkholderia sp. CCGE1001]
gi|323386876|gb|ADX58966.1| glycoside hydrolase family 28 [Burkholderia sp. CCGE1001]
Length = 667
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N N+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 335 YLRPCMVEFIGCTNVLMENYCTNNTPFWQHHPTDCKNVVIRGVTT--NSIGPNNDGFDPD 392
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ NV + +TGDD +A+KSG D +YG A H I+ T +S GI +GS
Sbjct: 393 ACDNVLCDGVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCTMNSGHGGITLGS 447
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGV+N+ A ++ + N + + I +KTN+ RGGF++N V V + N G+
Sbjct: 448 EMGGGVQNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGGFVKNFYVDKVTLPN---GVA 504
Query: 179 IAG 181
+ G
Sbjct: 505 LKG 507
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 15/248 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPNL+ + +++ V FQNSP WN+HP+ ++ IR V P + N DG+D +
Sbjct: 222 FLRPNLLVLNRCKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYAQNGDGLDIE 281
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV +E S GDD + +KSG D G P+ + IR T G +GSE S
Sbjct: 282 SCKNVLVEGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRHSTVYHAHGGFVIGSEMS 341
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GG +N+ +G+ KT GRGG + NI ++ M++ A
Sbjct: 342 GGAKNIFISDCTFIGTDIGLRFKTTRGRGGVVENIYARNINMKDIPGEAILFDMYYAAVD 401
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ + G+ + P + P PV I +V ++ I+GL + I L N
Sbjct: 402 PVPLTGEKRETPKVELLPVTEETPVFRKFYISNVVCDGAAKAVFIRGLPEMSISDIFLDN 461
Query: 234 INLQGVAG 241
+ ++ G
Sbjct: 462 LTIKAKEG 469
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-----KGIKIA 180
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFC 300
Query: 181 GDVGDHP---DDKFNP--NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNI 234
G G P + K P P I ++ V S G I GL I NI
Sbjct: 301 GPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNI 360
Query: 235 NL 236
++
Sbjct: 361 DV 362
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-----KGIKIA 180
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFC 300
Query: 181 GDVGDHP---DDKFNP--NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNI 234
G G P + K P P I ++ V S G I GL I NI
Sbjct: 301 GPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNI 360
Query: 235 NL 236
++
Sbjct: 361 DV 362
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 20/258 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN+I +++++ V FQNSP W +HP+ C +V IR VT+ + N+D +D +
Sbjct: 449 FLRPNMISLTRCKNVLLEGVTFQNSPAWTMHPLLCEHVSIRNVTVKNHWYAQNSDALDLE 508
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N +E TGDD + +KSG DE G G P+ I+ G +GSE S
Sbjct: 509 SCRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCKVYHAHGGFVIGSEMS 568
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GGV N+ + VG+ KT GRGG + +I V+DV M A+
Sbjct: 569 GGVRNMFVSNCTFMGSDVGLRFKTARGRGGVVEDIYVTDVNMTEIPGEAILFDMYYAAKD 628
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ G+ + P K P P +K++ + + L++GL + + N
Sbjct: 629 PVPQEGESNELPAIKAEPLNEGTPQFKNFYLKNIICRGAETAILVRGLPE-----MSIKN 683
Query: 234 INLQGVAGPTSPPLKCSD 251
IN++ + L C +
Sbjct: 684 INVENAVIEANKGLVCVE 701
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 119/233 (51%), Gaps = 6/233 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ F I++ + NSPFW IHP+ +N+ + VT+ D PN DG DP++
Sbjct: 211 RPQLVNFNACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTV--TNDGPNGDGCDPEAC 268
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SNV I++ TGDD +A+KSG + G + PS I IR G+ +GSE SGG
Sbjct: 269 SNVLIQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCKMKDGHGGVVIGSEISGG 328
Query: 131 VENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
NV AE H++ ++ + +KTN RGG I NI + +V + + + + ++ P
Sbjct: 329 CRNVFAEDCHMDSPHLDRVLRIKTNNCRGGVIENINMRNVTVGQCNEAV-LRINLDYEPR 387
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGVA 240
++ P V + +++V + + I GL N + + + N GV+
Sbjct: 388 EQCYRGFEPTVRRVYMENVTSRESKYGVQIIGLNNIENVSDVTVKNCRFDGVS 440
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 31/264 (11%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ ++F R ++I ++ ++SPFW IHP+ C +VVIR V + A N DG+DP+ S
Sbjct: 209 RPHFVQFNRCRHVLIEDISIEDSPFWTIHPLLCRDVVIRRVKVRAHGH--NNDGVDPEMS 266
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IED GDD V+VKSG D P+ + +R + +AVGSE SGG
Sbjct: 267 QNVLIEDCVFDQGDDAVSVKSGRDMDAWRLNTPTKNVVMRNCRIKNGHQLMAVGSELSGG 326
Query: 131 VENVLAEHINLYNVGVG-----------IHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
+EN+ ++ + G G ++VKTN RGG+++NI + +V KI
Sbjct: 327 IENIFVDNCHFVGDGKGDDGWAVPINNLLYVKTNERRGGYVKNIHMRNV------SATKI 380
Query: 180 AGDVGDHPDDKFNP---------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGIC 230
G + D L + G+ + DV + + LI+ + P +
Sbjct: 381 QGSLLAVETDVLYQWRTLLPTYVRKLTPIEGLYLSDVRVEEAKHLCLIKAETDMPVKTVS 440
Query: 231 LSNINLQGVAGPTSPPLKCSDVSG 254
L + + T +K +V G
Sbjct: 441 LRRLRANTL---TDTAIKTQNVQG 461
>gi|407710705|ref|YP_006794569.1| glycoside hydrolase family protein [Burkholderia phenoliruptrix
BR3459a]
gi|407239388|gb|AFT89586.1| glycoside hydrolase family 28 [Burkholderia phenoliruptrix BR3459a]
Length = 637
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N N+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 305 YLRPCMVEFIGCTNVLMENYCTNNTPFWQHHPTDCKNVVIRGVT--TNSIGPNNDGFDPD 362
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ NV + +TGDD +A+KSG D +YG A H I+ T +S GI +GS
Sbjct: 363 ACDNVLCDGVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCTMNSGHGGITLGS 417
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGV+N+ A ++ + N + + I +KTN+ RGGF++N V V + N G+
Sbjct: 418 EMGGGVQNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGGFVKNFYVDKVTLPN---GVA 474
Query: 179 IAG 181
+ G
Sbjct: 475 LKG 477
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-----KGIKIA 180
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFC 300
Query: 181 GDVGDHP---DDKFNP--NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNI 234
G G P + K P P I ++ V S G I GL I NI
Sbjct: 301 GPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNI 360
Query: 235 NL 236
++
Sbjct: 361 DV 362
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-----KGIKIA 180
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFC 300
Query: 181 GDVGDHP---DDKFNP--NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNI 234
G G P + K P P I ++ V S G I GL I NI
Sbjct: 301 GPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNI 360
Query: 235 NL 236
++
Sbjct: 361 DV 362
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 21/269 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP +I +N +++ ++ VIFQNSP WNIHP+ C NV+I V + P+ + N DG+D +
Sbjct: 224 FLRPVMISLVNCKNVWLNGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSYAQNGDGLDLE 283
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N I +S GDD + +KSG D G G P + + T G VGSE S
Sbjct: 284 SCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCTVFKGHGGFVVGSEMS 343
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI---------KI 179
GGV+N+ VG+ K+ GRGG + NI + ++ M + + + K
Sbjct: 344 GGVKNIKVSDCQFLGTDVGLRFKSTRGRGGIVENIYIDNMSMFDIQTDVITFDLYYGGKS 403
Query: 180 AGDVGDHPDD-------KFNPN-ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 231
A +V + D+ KF + P I I V +++ GL P + I +
Sbjct: 404 AVEVLNDGDEAKSQKVQKFKVDETTPCFRNIDINHVICRTARRAAYFNGLPEMPVSNIHI 463
Query: 232 SNINL----QGVAGPTSPPLKCSDVSGSA 256
++ + QG+ + +K ++ SA
Sbjct: 464 KDMEVNNAQQGIVINRTDGVKLENIKVSA 492
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-----KGIKIA 180
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFC 300
Query: 181 GDVGDHP---DDKFNP--NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNI 234
G G P + K P P I ++ V S G I GL I NI
Sbjct: 301 GPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNI 360
Query: 235 NL 236
++
Sbjct: 361 DV 362
>gi|170695826|ref|ZP_02886967.1| glycoside hydrolase family 28 [Burkholderia graminis C4D1M]
gi|170139250|gb|EDT07437.1| glycoside hydrolase family 28 [Burkholderia graminis C4D1M]
Length = 667
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N N+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 335 YLRPCMVEFIGCTNVLMENYATNNTPFWQHHPTDCKNVVIRGVTT--NSIGPNNDGFDPD 392
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ NV + +TGDD +A+KSG D +YG A H I+ T +S GI +GS
Sbjct: 393 ACDNVLCDGVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCTMNSGHGGITLGS 447
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGV+N+ A ++ + N + + I +KTN+ RGGF++N V V + N G+
Sbjct: 448 EMGGGVQNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGGFVKNFYVDKVTLPN---GVA 504
Query: 179 IAG 181
+ G
Sbjct: 505 LKG 507
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-----KGIKIA 180
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFC 300
Query: 181 GDVGDHP---DDKFNP--NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNI 234
G G P + K P P I ++ V S G I GL I NI
Sbjct: 301 GPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNI 360
Query: 235 NL 236
++
Sbjct: 361 DV 362
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN I+ + I+I V NSP W +HPV C NV + + ++ PNTDG++P+
Sbjct: 180 YLRPNFIQPYRCKDILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIGHG--PNTDGVNPE 237
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I+ + GDD +AVKSG + G PS I I G+ +GSE S
Sbjct: 238 SCKNVVIKGCHFDNGDDCIAVKSGRNADGRRINMPSENIVIEHNEMKDGHGGVTIGSEIS 297
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 183
GGV+NV+AE ++ N+ + +KTN RGG + NI +++ ++ I + +
Sbjct: 298 GGVKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEE 357
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
GD D K PVV I ++ + Q + +SP TG+ +++ + GV P
Sbjct: 358 GDAGDFK------PVVRNIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPM 411
Query: 244 S 244
Sbjct: 412 E 412
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 8/219 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ ++ +++I ++ N+PFW +HP NV +R V + + PN+DG DP+
Sbjct: 211 YLRPSFVQPYKCENVLIEDITIINAPFWLLHPTLSQNVTVRGVHL--ESLGPNSDGCDPE 268
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE+ + +TGDD +A+KSG + G P+ + IR + G+ +GSE S
Sbjct: 269 SCKNVVIENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIRNCKMEAGHGGVVIGSEIS 328
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GGV NV AE+ ++ ++ GI +KTN RGG + NI V + + ++ I I +
Sbjct: 329 GGVRNVFAENNVMSSPDLEKGIRIKTNSVRGGLLENIYVRNCTIGEVQQAIVINFQYEEG 388
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 225
KF+ P V + I+++ Q I+G + +P
Sbjct: 389 DAGKFD----PTVRNVEIRNLVCQHALQVFNIRGFERAP 423
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR-----KGIKIA 180
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDNVMCPFILNLYYFC 300
Query: 181 GDVGDHP---DDKFNP--NALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNI 234
G G P + K P P I ++ V S G I GL I NI
Sbjct: 301 GPRGKEPYVWEKKAYPIDERTPAFRRIHFSNITARNVHASAGFIYGLAEQFIQEITFDNI 360
Query: 235 NL 236
++
Sbjct: 361 DV 362
>gi|170736971|ref|YP_001778231.1| glycoside hydrolase family protein [Burkholderia cenocepacia MC0-3]
gi|169819159|gb|ACA93741.1| glycoside hydrolase family 28 [Burkholderia cenocepacia MC0-3]
Length = 665
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ +++++N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMANYQTQNTPFWQHHPTASRNVVIRGVTTN--SIGPNNDGFDPD 390
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V ED +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 445
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + + VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAVRVKTNMNRGGYVKDFHVKGVTLPN---GVT 502
Query: 179 IAG 181
+ G
Sbjct: 503 LKG 505
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN I+ + I+I V NSP W +HPV C NV + + ++ PNTDG++P+
Sbjct: 180 YLRPNFIQPYRCKHILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIGHG--PNTDGVNPE 237
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I+ + GDD +AVKSG + G PS I I G+ +GSE S
Sbjct: 238 SCKNVVIKGCHFDNGDDCIAVKSGRNADGRRINIPSENIVIEHNEMKDGHGGVTIGSEIS 297
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 183
GGV+NV+AE ++ N+ + +KTN RGG + NI +++ ++ I + +
Sbjct: 298 GGVKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEE 357
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
GD D K PVV + +K + Q + +SP TG+ +++ + GV P
Sbjct: 358 GDAGDFK------PVVRTVDVKQLKSMGGQYGIRVLAYDHSPVTGLKVADSEIDGVDVPM 411
Query: 244 S 244
Sbjct: 412 E 412
>gi|420246887|ref|ZP_14750314.1| endopolygalacturonase [Burkholderia sp. BT03]
gi|398073036|gb|EJL64222.1| endopolygalacturonase [Burkholderia sp. BT03]
Length = 674
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF+ ++++ N N+PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 342 YLRPCMVEFLGCTNVLMENYRTNNTPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 397
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ +NV + +TGDD +A+KSG YG P+ I+ T +S GI +GSE
Sbjct: 398 PDACNNVLCDGVTFNTGDDCIAIKSG-KALDTTYG-PAQNHVIQNCTMNSGHGGITLGSE 455
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+N+ A ++ + N + + I +KTN+ RGG+++N V +V + N G+ +
Sbjct: 456 MGGGVQNIYARNLQMLNQNWQTNPLNIAIRIKTNMNRGGYVKNFYVDNVTLPN---GVNL 512
Query: 180 AG 181
G
Sbjct: 513 TG 514
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 7/236 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN I+ + +++ +NSP W ++PV C ++ + VT+ + N DG DP+
Sbjct: 188 YLRPNFIQTIRCSRVLLQGFTLKNSPMWQLNPVMCRSLTVDGVTLYS--HGANNDGCDPE 245
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + V I + TGDD +++KSG D G G P + I + GIA+GSE S
Sbjct: 246 SCNGVHIRNCRFDTGDDCISLKSGRDRDGRMAGIPCENVLIENNEFADGHGGIALGSEMS 305
Query: 129 GGVENVLA--EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GG+ VLA + N+ + +KTN RGG + ++ ++D M++ G + G +
Sbjct: 306 GGIRRVLAVNNRFSSPNLTYALRLKTNARRGGRVEDVILADSVMDHV-HGAAVHGTM--L 362
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
+D N + LP + ITI+++ ++ P TG+ L NI + GVA P
Sbjct: 363 YEDGRNGSDLPEFHNITIENIVAHGGDYGIFLEAFDEVPVTGLTLRNIRIDGVARP 418
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 20/236 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP +I+F +++++ +V +SPFW IHPV+C NV +R V I +++ N DG DP+
Sbjct: 201 YLRPCMIQFYGCKNVLVEDVQIYDSPFWIIHPVFCDNVTVRNVYI--DSNNYNNDGCDPE 258
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS+NV IE+ + GDD +A+KSG D+ G G + + IR + I +GSE S
Sbjct: 259 SSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITIGSEMS 316
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDV---- 183
GGV N+ E + + GI+ K+N+ RGG+ N+ + + + G I +
Sbjct: 317 GGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYR 376
Query: 184 -GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 237
G+HP + I I+DV +V L+ GL + I L NI ++
Sbjct: 377 GGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVK 423
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 9/229 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI F +I+I +V NSPFW IHP+ C ++++R V I PN DG DP+S
Sbjct: 228 RPQLINFYLCNTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYNRG--PNGDGCDPESC 285
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 286 KNVLIENCRFDTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMKNGHGGVVIGSEISGG 345
Query: 131 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E+ ++ + I +KTN RGG + N+ V ++ + + + + ++
Sbjct: 346 YRNLYVENCVMDSPQLDRVIRIKTNDCRGGIVENVFVRNIKVGQCHEAV-LKINLLYESK 404
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+ N P+V + +K++ Q GL N C+ NI+++
Sbjct: 405 ENCNRAFPPIVRNVHLKNITCENSQYGIYAVGLPNKD----CVYNISVE 449
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 123/236 (52%), Gaps = 20/236 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP +I+F +++++ +V +SPFW IHPV+C NV +R V I +++ N DG DP+
Sbjct: 211 YLRPCMIQFYGCKNVLVEDVQIYDSPFWIIHPVFCDNVTVRNVYI--DSNNYNNDGCDPE 268
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS+NV IE+ + GDD +A+KSG D+ G G + + IR + I +GSE S
Sbjct: 269 SSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITIGSEMS 326
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDV---- 183
GGV N+ E + + GI+ K+N+ RGG+ N+ + + + G I +
Sbjct: 327 GGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYR 386
Query: 184 -GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 237
G+HP + I I+DV +V L+ GL + I L NI ++
Sbjct: 387 GGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAKLYNITLRNIKVK 433
>gi|254254779|ref|ZP_04948096.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
gi|124899424|gb|EAY71267.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
Length = 668
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 106/183 (57%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++++ QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 336 YLRPCMVEFIGCTNVLMADYQTQNTPFWQHHPTACRNVVIRGVTT--NSIGPNNDGFDPD 393
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V E+ +TGDD +A+KSG + EYG A H IR T +S GI +GS
Sbjct: 394 ACTDVLCEECTFNTGDDCIAIKSGKNLDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 448
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 449 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVN 505
Query: 179 IAG 181
+ G
Sbjct: 506 LKG 508
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++ R + +N+ W IHP C ++ +TI+AP DSPNTDG +P+S
Sbjct: 226 RPRGLHLVSCRKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESC 285
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETS 128
NV I S GDD +AVK+G H + GI++R G+ +GSE S
Sbjct: 286 RNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQRGHGGLVIGSEMS 345
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG----DVG 184
GGV +V E ++ G+ +KT GRGG + NIT+ V ++ + + D
Sbjct: 346 GGVHDVTVEDCDMIGTDRGLRLKTRRGRGGIVSNITMRRVLLDGVQTALSANAHYHCDAD 405
Query: 185 DHPD--DKFNP----NALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINL 236
H D NP + P V+GIT++DV + +G+ GL +P I + N+ +
Sbjct: 406 GHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLPEAPIRNIVVRNLTI 464
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|390567093|ref|ZP_10247442.1| glycoside hydrolase family protein [Burkholderia terrae BS001]
gi|389940941|gb|EIN02721.1| glycoside hydrolase family protein [Burkholderia terrae BS001]
Length = 674
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF+ ++++ N N+PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 342 YLRPCMVEFLGCTNVLMENYRTNNTPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 397
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ +NV + +TGDD +A+KSG YG P+ I+ T +S GI +GSE
Sbjct: 398 PDACNNVLCDGVTFNTGDDCIAIKSG-KALDTTYG-PAQNHVIQNCTMNSGHGGITLGSE 455
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+N+ A ++ + N + + I +KTN+ RGG+++N V +V + N G+ +
Sbjct: 456 MGGGVQNIYARNLQMLNQNWQTNPLNIAIRIKTNMNRGGYVKNFYVDNVTLPN---GVNL 512
Query: 180 AG 181
G
Sbjct: 513 TG 514
>gi|187919562|ref|YP_001888593.1| glycoside hydrolase [Burkholderia phytofirmans PsJN]
gi|187718000|gb|ACD19223.1| glycoside hydrolase family 28 [Burkholderia phytofirmans PsJN]
Length = 671
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N N+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 339 YLRPCMVEFIGCTNVLMENYTTNNTPFWQHHPTDCKNVVIRGVTT--NSIGPNNDGFDPD 396
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ +NV + +TGDD +A+KSG D +YG A H I+ +S GI +GS
Sbjct: 397 ACNNVLCDSVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCIMNSGHGGITLGS 451
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGV+N+ A ++ + N + + I +KTN+ RGGF++N V V + N G+
Sbjct: 452 EMGGGVQNIYARNLQMLNQNWATNPLNIAIRIKTNMNRGGFVKNFYVDKVTLPN---GVS 508
Query: 179 IAG 181
+ G
Sbjct: 509 LKG 511
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 121/229 (52%), Gaps = 9/229 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI F + +++I +V NSPFW IHP++C ++++R V I PN DG DP+S
Sbjct: 213 RPQLINFYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFNRG--PNGDGCDPESC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ TGDD +A+KSG +E G + PS I +R + G+ +GSE SGG
Sbjct: 271 KNVLIENCRFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKNGHGGVVIGSEISGG 330
Query: 131 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
N+ E ++ + I +KT+ RGG I N+ V ++ + + + + ++
Sbjct: 331 YRNLYVEDCVMDSPQLDRVIRIKTSTCRGGVIENVFVRNIKVGQCNEAV-LRINLKYEER 389
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
++ N P V + +K+V K + + GL + +SN++L+
Sbjct: 390 EQCNRGFDPTVRNVHLKNVTCEKSRYGIVAIGLDDDKH----VSNVSLE 434
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 11/239 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP +I+F+N ++I++ N+ +NSPFW +H + ++ IR ++ + + N DGIDP+
Sbjct: 194 FLRPQMIQFLNCKNILVENIRIENSPFWCLHLLKSESITIRGISY--KSLNHNNDGIDPE 251
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIA-YGHPSSGITIRRVTGSSPFSGIAVGSET 127
+ +V IE+ GDD VA+K+G D G A PS I IR G+ +GSE
Sbjct: 252 YAKDVLIENVTFDNGDDNVAIKAGRDHEGRANTATPSQNIIIRNCNFKG-LHGVVIGSEM 310
Query: 128 SGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
S GV+NV E+ + GI++KTN RGG+I+NI V ++ ++ + I + H
Sbjct: 311 SAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNIFVRNIQLDQVEDCLYITANY--H 368
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTS 244
+ K V+ + ++ K +SG+ IQG + I L NI ++ S
Sbjct: 369 GEGK---GYQSDVSNVYFSNITCNKASESGIVIQGFADKKIKNISLKNIEIKEAKNALS 424
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN+I +++I V FQNSP W +HP+ ++ +R V + P N D +D +
Sbjct: 446 FLRPNMISITECENVLIEGVTFQNSPAWTLHPLLSKHITLRNVNVRNPWFGQNNDALDLE 505
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S S ++ TGDD + +KSG DE G G P+ + I+ T G +GSE S
Sbjct: 506 SCSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTTVFHGHGGFVIGSEMS 565
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV+NV ++ + +G+ KT RGG + NI +S++ M N G I D+
Sbjct: 566 GGVKNVFVDNCSFLGTDIGLRFKTKRDRGGVVENIYISNIAMNNI-PGEAILFDMYYEAK 624
Query: 189 DKF----NPNALPVV------------NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 232
D + +ALPV+ IK+V + +++GL P GI +
Sbjct: 625 DPVPLDGDSHALPVIAPQPVNEGTPQFKNFYIKNVVSHGAVSAIVLRGLPEMPIRGIKIE 684
Query: 233 NINLQGVAG 241
+ + + G
Sbjct: 685 DSHFKSDKG 693
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 19/242 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP+ I+F NS++I+I + ++SP W I PV C N+ I V I+ PNTDG +PD
Sbjct: 199 YLRPSFIQFYNSKNILIEGITVKDSPMWQISPVLCENITIDKVKIVGHG--PNTDGFNPD 256
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N+ I++ Y + GDD +A+KSG + G P I I+ GI +GSE S
Sbjct: 257 SCKNILIKNCYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQNNYMKDGHGGITIGSEIS 316
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA------ 180
G V NV A+H ++ N+ + KTN RGG I NI + +++ + I I
Sbjct: 317 GSVRNVFADHNVMDSPNLDRALRFKTNSVRGGIIENIYFKNTTVKSIGEEIFIVDMDYEE 376
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G++ P+V I ++++ + L+ +P + + +N L V
Sbjct: 377 GDAGEYT---------PIVRNIFVENLESYGGKTGILMSAYDRTPISNVQFTNCILHNVE 427
Query: 241 GP 242
P
Sbjct: 428 TP 429
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 88/162 (54%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ F+ +++++ V+F+NSP WNIHP+ C NV++ V + P + N DG+D +
Sbjct: 226 FLRPVMVSFIECKNVLLEGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQNGDGLDLE 285
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N I +S GDD + +KSG DE G P+ + I G VGSE S
Sbjct: 286 SCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDNCKVFQGHGGFVVGSEMS 345
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
G V N+L + VG+ K+ GRGG + NI + D+ M
Sbjct: 346 GSVRNILVSNCQFLGTDVGLRFKSCRGRGGVVENIYIRDINM 387
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 12/237 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN IEF ++++ ++ NSPFW +HP+ +N++I VT+ + PN DG DP+
Sbjct: 220 YLRPNFIEFFECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTV--NSHGPNNDGCDPE 277
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N+ I++ +TGDD +A+K+G D G PS I ++ G+ +GSE S
Sbjct: 278 YSQNIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCKMIDGHGGVVIGSEIS 337
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GV NV E+ ++ N+ I +KTN RGG I N+ V ++ + ++ + + ++ +
Sbjct: 338 AGVNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENVFVRNLEVGTVKECV-LKLNMFYN 396
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQGV 239
N +PV+ I +++V V+ G +G K SP I L N+ +Q V
Sbjct: 397 VYGSQTGNFIPVIRNINLENV---NVKNGGKYSIWAEGYKESPVENITLKNVKIQKV 450
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNYHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGIVEDIRVSNIVMDN 287
>gi|221210443|ref|ZP_03583423.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
gi|221169399|gb|EEE01866.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
Length = 665
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N QN+PFW HP C NVVIR VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTACRNVVIRGVTT--NSIGPNNDGFDPD 390
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V ED +TGDD +A+KSG + E G A H +R T +S GI +GS
Sbjct: 391 ACTDVLCEDCTFNTGDDCIAIKSGKNRDTESGPAKRH-----LVRNCTMNSGHGGITLGS 445
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE V A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQVYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVSLPN---GVT 502
Query: 179 IAG 181
+ G
Sbjct: 503 LKG 505
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 126/239 (52%), Gaps = 11/239 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP +I+F+N ++I++ NV +NSPFW +H + N+ +R ++ + + N DGIDP+
Sbjct: 191 FLRPQMIQFLNCKNILVENVRIENSPFWCLHLLKSQNITVRGISY--KSLNYNNDGIDPE 248
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIA-YGHPSSGITIRRVTGSSPFSGIAVGSET 127
+ +V IE+ GDD VA+K+G D G A PS I IR G+ +GSE
Sbjct: 249 YAKDVLIENVTFDNGDDNVAIKAGRDHEGRANTASPSENIVIRNCNFKG-LHGVVIGSEM 307
Query: 128 SGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
S GV+NV E+ + GI++KTN RGG+I+N+ V ++ ++ + I +
Sbjct: 308 SAGVQNVFVENCKTAGYLKRGIYLKTNADRGGYIKNVFVQNLQLDEVEDCLYITANYHGE 367
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTS 244
+ + ++ I ++ + +SG+ IQG + I L+NI+++ S
Sbjct: 368 GEGYQSD-----ISNIHFSNITCNRASESGIVIQGFSDKKIRSISLNNIDIKEAKNALS 421
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ +N + +++ FQNSP WNIHP+ C +V IR +T+ P S N DG+D +
Sbjct: 250 FMRPVMVSLINCKKVLLDGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPWYSQNGDGLDLE 309
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N I ++ GDD + +KSG D++G G P+ + ++ G VGSE S
Sbjct: 310 SCKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKNNVVYHGHGGFVVGSEMS 369
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA-RKGIKI-------- 179
GV+NV + +G+ K+ GRGG + NI +S++ M N + I
Sbjct: 370 SGVKNVHVSNCTFIGTDIGLRFKSTRGRGGVVENIYISNIDMINIPTQAISFNLFYGGNS 429
Query: 180 ----AGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
A G ++K P P I +K++ ++ +QGL + + N
Sbjct: 430 PTMDAEQGGAKKEEKLMPVTEETPSFKDIYMKNIRVAGADEALALQGLPEMNLQNVNIEN 489
Query: 234 INLQGVAGPTS 244
L+ G T+
Sbjct: 490 AVLKAKKGITA 500
>gi|254392542|ref|ZP_05007720.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706207|gb|EDY52019.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 380
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 35/255 (13%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP +++F R ++IS++ + P W +HPV C+NV +R +T+ + NTDG+DP+
Sbjct: 122 YLRPKMVQFNRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPE 179
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+S V I +T DD VAVK+G DE G G PS I ++ S + GI VGSE S
Sbjct: 180 ASRLVHITGCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCDFSGRWGGITVGSEMS 239
Query: 129 GGVENVLAEHINL--------YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI- 179
GGV V AE + Y V +++K + RGGF+ + V + + +
Sbjct: 240 GGVRRVFAEDCRINPPDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFV 299
Query: 180 -----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKNSPFTGI 229
G+ G HP ++++D+ + + G + GL+ G+
Sbjct: 300 NMDYNGGEGGTHP--------------VSVRDIHLSHCRIDGARAVLRLVGLETDRLRGV 345
Query: 230 CLSNINLQGVAGPTS 244
L++ + GV GP +
Sbjct: 346 HLAHCDFTGVRGPDA 360
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 117/250 (46%), Gaps = 21/250 (8%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+R TL RP L+ + + +V ++SP W +HP+ C +V +R VTI+ P DSPN
Sbjct: 127 FRAGTLAHPRPTLVGLHRCTHVRLRDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPPDSPN 186
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGIDP+S NV I +I GDD +A+K+G + + + T G+
Sbjct: 187 TDGIDPESCRNVRISGCHIDVGDDCIALKAGTEASPERVA--CENVVVTGCTLVHGHGGV 244
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-- 179
+GSE SGG+ NV+ GI +K GRGG + ++ VS+V M++ + +
Sbjct: 245 VLGSEMSGGIRNVVVADCVFQGTDRGIRLKARRGRGGVVEDVRVSNVVMDDVGCPLVLNQ 304
Query: 180 ------------AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQ-GLKNSPF 226
GD G P D P+ IT+ V V+ + + GL P
Sbjct: 305 HYDRGPGGDSPHVGDRGALPVDATT----PLFRRITVAHVSARNVRAAAVFALGLAEQPV 360
Query: 227 TGICLSNINL 236
+ L ++ +
Sbjct: 361 AELVLDDVAV 370
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 133/275 (48%), Gaps = 26/275 (9%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P RP LIEF+ + + + W+IHP C N+V R +T+ + N DGID
Sbjct: 171 PLRRPALIEFLYCDDVHLEGFSTSYAHMWSIHPTCCDNLVFRNLTVRSTLT--NGDGIDI 228
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSGIAVGSE 126
DS +V I+ I++GDD +++KSG E P+ + I T F+ I +GSE
Sbjct: 229 DSCRHVLIDTCDIASGDDCISLKSGRGEEAYQLARPTEDVRIVNCTLEGRGFACIGIGSE 288
Query: 127 TSGGVENVLAEHINLYNV-GVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDVG 184
TS G+ VL E + +V +++K+ +GRG FI ++TV D+ R G +KI+
Sbjct: 289 TSAGIRRVLIEGCRVTSVYKFAVYIKSRVGRGAFIEDLTVRDMSAAKMRMGFLKISQTSA 348
Query: 185 DHPDDKFNP--NALPVVNGITIKD---------VWGTKVQQSGLIQGLKNSPFTGIC--- 230
D+ P + LP+ I+ V ++ L+ GL FTG C
Sbjct: 349 GVQDENPVPGLDGLPLFRNISFLRIHVDDAPVLVEAKEISADKLLDGLTLDGFTGTCAKG 408
Query: 231 --LSNI---NLQGVA--GPTSPPLKCSDVSGSAYQ 258
L+NI L+G+A G T P L+ +V+G Q
Sbjct: 409 LELANITHATLRGIAVSGFTGPLLRIDNVTGKGLQ 443
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDN 287
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP L+ F N I + ++ SP W I+P+ CSN +TIL PADSPNTDGID
Sbjct: 124 LAYPRPKLMSFHNCHRITVKDIKLIQSPSWTINPILCSNATFDNLTILNPADSPNTDGID 183
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGS 125
P+S NV I + +I GDD +A+K+G ++ Y ITI T G+ +GS
Sbjct: 184 PESCKNVRISNCHIDVGDDCIAIKAGTED---TYERIACENITITNCTMVHGHGGVVLGS 240
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
E SG + N+ + GI +K+ GRGG + +I VS++ M+N
Sbjct: 241 EMSGSIRNITISNCIFQETDRGIRLKSRRGRGGNVEDIRVSNIVMDN 287
>gi|409198539|ref|ZP_11227202.1| glycoside hydrolase [Marinilabilia salmonicolor JCM 21150]
Length = 531
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ + F S++I I + + SP WNIH +Y S++V+R +TI +S N DGI DSS
Sbjct: 215 RPSFVVFWKSKNIFIEGITLRESPMWNIHLIYSSHIVVRDITI-NSVESHNGDGIVLDSS 273
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV------TGSSPFSGIAVG 124
S+ +E +++STGDD + +KSG++E G+ P+ + IR TGS G+ G
Sbjct: 274 SDALLEYNHLSTGDDAIVLKSGFNEEGLEINIPTENVVIRNYYAYDVRTGS---GGVVFG 330
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
SETSGG+ N+ GI KT GRG NI +SDV M+N R
Sbjct: 331 SETSGGIRNIYVHDALFEKCDRGIRFKTARGRGNITENIIISDVQMKNIR 380
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 121/244 (49%), Gaps = 19/244 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ R + I+ + ++I V ++SP W IHPV +V++R V I+ PNTDG++P+
Sbjct: 210 YLRSSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSEHVIVRGVHIIG--HGPNTDGVNPE 267
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IED Y GDD +A+KSG +E G G PS I IRR G+ +GSE S
Sbjct: 268 SCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHGGVTIGSEIS 327
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------A 180
GGV V AE+ ++ N+ + +KTN RGG I +I + +++ + +
Sbjct: 328 GGVRYVYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEE 387
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G H PVV I ++ + + + I +SP T + N + V
Sbjct: 388 GDAGPH---------RPVVRHIEVEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVT 438
Query: 241 GPTS 244
P S
Sbjct: 439 YPLS 442
>gi|387904260|ref|YP_006334598.1| Polygalacturonase [Burkholderia sp. KJ006]
gi|387579152|gb|AFJ87867.1| Polygalacturonase [Burkholderia sp. KJ006]
Length = 664
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 332 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTASRNVVIRGVTT--NSIGPNNDGFDPD 389
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V E +TGDD VA+KSG D EYG A H IR T +S GI +GS
Sbjct: 390 ACTDVLCERCTFNTGDDCVAIKSGKDRDTEYGPAKRH-----LIRDCTMNSGHGGITLGS 444
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 445 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVLPN---GVN 501
Query: 179 IAG 181
+ G
Sbjct: 502 LKG 504
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ F+ +++ + V+FQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSFIECKNVWLEGVVFQNSPAWNLHPLMCENVLIENVEVRNPSYAQNGD 279
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G + + T G V
Sbjct: 280 GLDLESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCTVYKGHGGFVV 339
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYME----NAR 174
GSE SGGV N+ + VG+ K+ GRGG +IRNI++ D+ E N
Sbjct: 340 GSEMSGGVRNISVNNCQFLGTDVGLRFKSKRGRGGVVENIWIRNISMIDIPTEPVTFNLY 399
Query: 175 KGIKIAGDV---GDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
G K A +V G+ K P P I I+ + + +++ G+ P
Sbjct: 400 YGGKSAVEVLESGEVVPVKVAPMPVDETTPCFRNIHIEHLTCSNARRAMYFNGIPEMPID 459
Query: 228 GICLSNINL 236
GI L +I +
Sbjct: 460 GITLKHIRI 468
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 35/255 (13%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP +++F R ++IS++ + P W +HPV C+NV +R +T+ + NTDG+DP+
Sbjct: 221 YLRPKMVQFNRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPE 278
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+S V I +T DD VAVK+G DE G G PS I ++ S + GI VGSE S
Sbjct: 279 ASRLVHITGCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCDFSGRWGGITVGSEMS 338
Query: 129 GGVENVLAEHINL--------YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI- 179
GGV V AE + Y V +++K + RGGF+ + V + + +
Sbjct: 339 GGVRRVFAEDCRINPPDFPGHYPVKYPVYLKASKKRGGFVDGVYVRRFSGQAVEREVLFV 398
Query: 180 -----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKNSPFTGI 229
G+ G HP ++++D+ + + G + GL+ G+
Sbjct: 399 NMDYNGGEGGTHP--------------VSVRDIHLSHCRIDGARAVLRLVGLETDRLRGV 444
Query: 230 CLSNINLQGVAGPTS 244
L++ + GV GP +
Sbjct: 445 HLAHCDFTGVRGPDA 459
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 11/238 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I ++I+I + +NSP W +HP++C ++ + + I+ P +SPNTDGI+P+S
Sbjct: 219 RPRSIFLNRCKNILIEGITIRNSPSWTVHPLFCKDLKLLTLNIVNPKNSPNTDGINPESC 278
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
SNV I IS GDD VAVK+G E + PS I IR + +GSE S G
Sbjct: 279 SNVLIAGCRISVGDDCVAVKAGKYEVKQKFDVPSENIEIRNCLMEHGHGAVVIGSEMSCG 338
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR--KGIKIAGDVGDHPD 188
V NV + N G+ +KT RGG++ I + +V M I + G D
Sbjct: 339 VRNVKVSNCLFVNTDRGLRIKTRRERGGYVDEIELKNVQMNGVFVPLAINCFYNCGADYD 398
Query: 189 DKFNPNAL--------PVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNINLQ 237
++ + + P + I +K+V V+ + + GL I + N+ ++
Sbjct: 399 PLYSSDKVVADVNERTPTIGSIVMKNVLCEDVKSMAAFVYGLPEKKIEKIYMENVRIE 456
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN I+ + I+I V NSP W +HPV C NV + + ++ PNTDG++P+
Sbjct: 180 YLRPNFIQPYRCKDILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPE 237
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I+ + +GDD +AVKSG + PS I I G+ +GSE S
Sbjct: 238 SCKNVVIKGCHFDSGDDCIAVKSGRNADARRINMPSENIVIEHNEMKDGHGGVTIGSEIS 297
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 183
GGV+NV+AE ++ N+ + +KTN RGG + NI +++ ++ I + +
Sbjct: 298 GGVKNVIAEGNLMDSPNLDRALRIKTNSVRGGVLENIYFHKNTVKSLKREVIAIDMEYEE 357
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
GD D K PVV I ++ + Q + +SP TG+ +++ + GV P
Sbjct: 358 GDAGDFK------PVVRNIDVEQLKSMGGQYGIRVLAYDHSPVTGLKVTDSEIDGVDIPM 411
Query: 244 S 244
Sbjct: 412 E 412
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 109/233 (46%), Gaps = 7/233 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP+ IE ++++I V NSP W IHP C+NV +R VT+ + N DG DP+
Sbjct: 204 FLRPSFIEPYRCKNVLIEGVTIVNSPMWEIHPTLCTNVTVRGVTVHSLGT--NNDGCDPE 261
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +V IED TGDD +A+KSG + G G + I IRR T G+ +GSE S
Sbjct: 262 SCHDVLIEDCTFQTGDDCIAIKSGRNNDGRRVGVAAENIIIRRCTMKDGHGGVTIGSEVS 321
Query: 129 GGVENVLAEHINLYN--VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GGV NV + + + K+N RGG I NI VS V + R + D+
Sbjct: 322 GGVRNVFVSDCQMDSPRLDRAFRFKSNAVRGGEIENIQVSQVKI--GRVARAVLSVEFDY 379
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ P PV+ + I++V I + + L + GV
Sbjct: 380 EEGAHGPE-RPVLRHVRIENVTAESCGSVATITSFPAAVIDDVRLKDCTFHGV 431
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 117/235 (49%), Gaps = 9/235 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ +++I V +NSP W IHPV C NV+++ V I + PN DG +P+
Sbjct: 216 YLRPQFIQPYRCENVLIEGVTIRNSPMWEIHPVLCRNVIVQNVII--NSHGPNNDGCNPE 273
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S ++V I+D TGDD +A+KSG + G P+ I + GI VGSE S
Sbjct: 274 SCTDVLIKDCDFDTGDDCIAIKSGRNADGRRLKAPTENIIVTGCRMKDGHGGITVGSEIS 333
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKIAGDVGD 185
GGV N+ A + L N+ + VK N RGG + N+ ++ + + A I I + +
Sbjct: 334 GGVRNLFASNCRLDSPNLDHALRVKNNAMRGGLLENLHFRNIDVGQVAHAVITIDFNYEE 393
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
F PVV T+ + TK + + +QGL +P + L+N VA
Sbjct: 394 GAKGSFT----PVVRDYTVDGLRSTKSKYALDVQGLATAPIVNLRLTNCIFDNVA 444
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 123/236 (52%), Gaps = 20/236 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP +I+F +++++ +V +SPFW IHPV+C+NV +R + I +++ N DG DP+
Sbjct: 199 YLRPCMIQFYGCKNVLVEDVRIFDSPFWIIHPVFCNNVTVRNIYI--DSNNYNNDGCDPE 256
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +NV IE+ + GDD +A+KSG D+ G G + + IR + I +GSETS
Sbjct: 257 SCTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITIGSETS 314
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI------KIAGD 182
GGV NV E + + GI+ K+N+ RGG+ N+ + + + G+
Sbjct: 315 GGVRNVYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVVNFRTNYHGYR 374
Query: 183 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 237
G+HP + I I+D+ +V L+ GL + I L NI ++
Sbjct: 375 GGNHP---------TLFRNICIEDINCNRVDSVALMANGLPEAKLYNITLRNIKVK 421
>gi|134292563|ref|YP_001116299.1| glycoside hydrolase family protein [Burkholderia vietnamiensis G4]
gi|134135720|gb|ABO56834.1| glycoside hydrolase, family 28 [Burkholderia vietnamiensis G4]
Length = 664
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ N QN+PFW HP NVVIR VT + PN DG DPD
Sbjct: 332 YLRPCMVEFIGCTNVLMENYQTQNTPFWQHHPTASRNVVIRGVTT--NSIGPNNDGFDPD 389
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V E +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 390 ACTDVLCERCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRDCTMNSGHGGITLGS 444
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 445 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVVLPN---GVN 501
Query: 179 IAG 181
+ G
Sbjct: 502 LKG 504
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 88/167 (52%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q F RP ++ + +++ + VIFQNSP WN+HP+ C NV+I V + P+ + N D
Sbjct: 220 QSVRHFLRPVMVSLIECKNVWLQGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQNGD 279
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S N I +S GDD + +KSG DE G G + + T G V
Sbjct: 280 GLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCTVFKGHGGFVV 339
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
GSE SGGV NV + VG+ K+ GRGG + NI + ++ M
Sbjct: 340 GSEMSGGVRNVSVSNCQFLGTDVGLRFKSKRGRGGVVENIWIRNIAM 386
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 8/233 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ F I++ +V SPFW IHP++ +++ +R V ++ D PN DG DP+
Sbjct: 219 RPQLVSFNKCEGILLEDVTLLRSPFWVIHPLHSTDITVRRVKMIN--DGPNGDGCDPECC 276
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V IED + +TGDD +A+KSG + G PS I IR + G+ VGSE SGG
Sbjct: 277 DRVLIEDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGHGGVVVGSEISGG 336
Query: 131 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 187
+NV A ++ + + +KTN RGG I NI + ++ + ++ + KI D +H
Sbjct: 337 CQNVYAHDCVMDSPELERVLRIKTNSCRGGIIENINMRNITVGKCKESVLKINLDY-EH- 394
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT-GICLSNINLQGV 239
++ P+V + +++V + Q I GL F I + N + GV
Sbjct: 395 NEICCRGYYPIVRNVYMENVTSQQSQYGVQIIGLDEDTFVYDINVKNCHFNGV 447
>gi|344175292|emb|CCA87961.1| polygalacturonase [Ralstonia syzygii R24]
Length = 680
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP +IEF+ ++++ +PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 348 YLRPCMIEFIGCTNVLMEAYRTHATPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 403
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ SNV ED +TGDD +A+KSG YG P+ I+ +S GI +GSE
Sbjct: 404 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTTYG-PAQNHVIQNCVMNSGHGGITLGSE 461
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 462 MGGGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFYVDDVTLPN---GVSL 518
Query: 180 AG 181
G
Sbjct: 519 TG 520
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 116/239 (48%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++ + +N+ W IHP C ++ +TI+AP DSPNTDG +P+S
Sbjct: 226 RPRGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESC 285
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETS 128
NV I S GDD +AVK+G H + GI++R G+ +GSE S
Sbjct: 286 RNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQRGHGGLVIGSEMS 345
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG----DVG 184
GGV +V E ++ G+ +KT GRGG + NIT+ V ++ + + D
Sbjct: 346 GGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNITMRRVLLDGVQTALSANAHYHCDAD 405
Query: 185 DHPD--DKFNP----NALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINL 236
H D NP + P V+GIT++DV + +G+ GL +P I + N+ +
Sbjct: 406 GHDDWVQSRNPAPVNDGTPFVDGITVEDVEIRNLAHAAGVFLGLPEAPIRNIVVRNLTI 464
>gi|300693779|ref|YP_003749752.1| polygalacturonase [Ralstonia solanacearum PSI07]
gi|299075816|emb|CBJ35125.1| Polygalacturonase [Ralstonia solanacearum PSI07]
Length = 680
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP +IEF+ ++++ +PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 348 YLRPCMIEFIGCTNVLMEAYRTNATPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 403
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ SNV ED +TGDD +A+KSG YG P+ I+ +S GI +GSE
Sbjct: 404 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTTYG-PAQNHVIQNCVMNSGHGGITLGSE 461
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 462 MGGGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFYVDDVTLPN---GVSL 518
Query: 180 AG 181
G
Sbjct: 519 TG 520
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 126/235 (53%), Gaps = 12/235 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN IEF +++I ++ N+PFW +HP+ +N++I VT+ + PN DG DP+
Sbjct: 220 YLRPNFIEFFECNTVLIKDIKIINAPFWILHPMKSNNIIIDGVTV--NSHGPNNDGCDPE 277
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N+ I++ +TGDD +A+KSG D G PS I ++ G+ +GSE S
Sbjct: 278 YSQNIIIKNCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCKMIDGHGGVVIGSEIS 337
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 183
GV NV E+ ++ N+ I +KTN RGG I ++ V ++ + ++ + + +V
Sbjct: 338 AGVNNVFVENCIMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMFYNV 397
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 237
F +PV+ I++++V K + G+ +G K SP + L N+ ++
Sbjct: 398 YGSQTGSF----IPVIRNISLENVTVKKAGKYGVWAEGYKESPVENVTLKNVVIE 448
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 120/243 (49%), Gaps = 14/243 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ ++ I +V NSP + +HPV C NV+ R V + + PN DG DP+
Sbjct: 209 WLRPMFIQPYRCTNVQIEDVTITNSPMYEMHPVLCRNVIARNVKV--SSHGPNNDGCDPE 266
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS +V I+ TGDD +A+KSG + G PS + ++ G+ +GSE S
Sbjct: 267 SSVDVLIDGCTFDTGDDCIAIKSGRNADGRRLHSPSENLIVQNCVMKDGHGGVTMGSECS 326
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG--IKIAGDVG 184
GG+ NV A+ + N+ V + K N RGG I + VYM N + G + A DV
Sbjct: 327 GGIRNVFAQDCQMDSPNLNVALRFKNNAVRGGVIEH-----VYMRNVKAGQVAQAAIDVD 381
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
+ ++ + PVV + + ++ K ++G K++P I + N AG T
Sbjct: 382 FYYEEGEKGSFTPVVRDVEVVNLEVKKCTTPWSLRGFKSAPVRDIRIRNCTF---AGATK 438
Query: 245 PPL 247
PP+
Sbjct: 439 PPV 441
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 14/257 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP E S +++I V F N+PFW +HP+ C+NV + V +++ PN DG +P+ S
Sbjct: 214 RPTFFEPFESENVLIKGVTFINAPFWVMHPIKCTNVTVDGVKVIS--HGPNNDGCNPEYS 271
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I + TGDD +A+KSG ++ G G S I + G+ +GSE S G
Sbjct: 272 KNVHITNCVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCIMKDGHGGVVMGSEISAG 331
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDVGDHP 187
V NV + + N+ I +KTN RGGF+ N+ V D+ + ++ +KI +
Sbjct: 332 VRNVYVRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKDIQVGQVKEAFLKINTYYAIY- 390
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINLQGVAGPT--- 243
D +P + I I++V + G LIQG + +P + N+ ++ P
Sbjct: 391 -DNQEGEHIPTIKNIHIENVTVEDGGKYGILIQGREENPVKNVTFKNVTIKKAEMPMRVE 449
Query: 244 -SPPLKCSD--VSGSAY 257
S P++ ++ + G Y
Sbjct: 450 NSEPIEFTNTTIGGQKY 466
>gi|344171385|emb|CCA83875.1| polygalacturonase [blood disease bacterium R229]
Length = 680
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP +IEF+ ++++ +PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 348 YLRPCMIEFIGCTNVLMEAYRTNATPFWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 403
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ SNV ED +TGDD +A+KSG YG P+ I+ +S GI +GSE
Sbjct: 404 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTTYG-PAQNHVIQNCVMNSGHGGITLGSE 461
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 462 MGGGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFYVDDVTLPN---GVSL 518
Query: 180 AG 181
G
Sbjct: 519 TG 520
>gi|322436856|ref|YP_004219068.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321164583|gb|ADW70288.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 414
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 124/241 (51%), Gaps = 16/241 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD-SPNTDGIDPDS 69
RP + +S+ + + N+ QN+ FW + P Y +V ++ +LAP +PNTDGIDP S
Sbjct: 146 RPMGLLIDHSKHVTVENITIQNAGFWQVVPYYSDYLVFSHLRVLAPQRGAPNTDGIDPFS 205
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
SS++ I+ + S GDD +A+KSG PS I I S G+++GSE +G
Sbjct: 206 SSHIKIDHYFSSVGDDNIAIKSGAIN-SPGPDAPSEDIVITDCIFESGH-GLSIGSEIAG 263
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA--------- 180
GV +V AE I+ GI VK N RG ++T D+ M++ R I I+
Sbjct: 264 GVHHVHAERISFKGTDQGIRVKANRDRGNDTSDLTFKDITMDDVRTSILISEYYPKAMPE 323
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
G+V P + P+ + I I++V +G+I GL SP T I L N+++Q
Sbjct: 324 GEVASAPITRLTPH----FHDIHIENVKSVNSDWAGVIVGLPESPVTDISLKNVSIQAKK 379
Query: 241 G 241
G
Sbjct: 380 G 380
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 18/259 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP E +I++ +V F N+PFW +HP+ N+ + VT+ + PN DG DP+ S
Sbjct: 216 RPTFFEPFECENILVKDVTFTNAPFWVMHPIKSVNITVDGVTVRS--HGPNNDGCDPEYS 273
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I++ TGDD +A+KSG ++ G PS I + G+ +GSE S G
Sbjct: 274 KNVHIKNCLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCEMKDGHGGVVMGSEISAG 333
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDVGDHP 187
V NV + + N+ I +KTN RGGF+ N+ V ++ + ++ +K+ G +
Sbjct: 334 VRNVYVRNCKMDSPNLDRAIRIKTNTLRGGFVENVFVKNIEVGQVKEAFLKVNTHYGIYA 393
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQGVAGPT 243
+ + + +P + I I+DV KV G L++G + P I N+ + A P
Sbjct: 394 NQE--GDYMPSIKNIHIEDV---KVDNGGKYGILVRGREALPVKNITFKNVVINKAATPM 448
Query: 244 ----SPPLKCSDVSGSAYQ 258
S P++ ++ S + Q
Sbjct: 449 LIEHSEPIQFTNTSINGKQ 467
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 122/236 (51%), Gaps = 20/236 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP +I+F +++++ ++ +SPFW IHPV+C NV +R V I +++ N DG DP+
Sbjct: 201 YLRPCMIQFYGCKNVLVEDLKIYDSPFWIIHPVFCDNVTVRNVYI--DSNNYNNDGCDPE 258
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS+NV IE + GDD +A+KSG D+ G G + + IR + I +GSE S
Sbjct: 259 SSTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITIGSEMS 316
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDV---- 183
GGV N+ E + + GI+ K+N+ RGG+ N+ + + + G I +
Sbjct: 317 GGVRNIYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYR 376
Query: 184 -GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 237
G+HP + I I+DV +V L+ GL + I L NI ++
Sbjct: 377 GGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAKLYDITLRNITVK 423
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 69
RP +I + I+ + QNSP WNIHP +CS++ VT+L P SPNTDG++P+S
Sbjct: 229 ARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFCSHLKFIGVTVLGPKVSPNTDGLNPES 288
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
+V I S GDD +AVK+G G Y PSS I IR+ I +GSE +
Sbjct: 289 CDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCCMRDGHGSITLGSEMAA 348
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMEN 172
G++N+ A N G+ +KT GRG I I D+ M++
Sbjct: 349 GIKNLQARQCVFLNTDRGLRIKTRRGRGKDAVIDGILFEDIRMDS 393
>gi|160880699|ref|YP_001559667.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429365|gb|ABX42928.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 474
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 110/238 (46%), Gaps = 11/238 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + + I+I V QNSP WN+HP+ C+N+ +R I + N DG+D +S
Sbjct: 195 RPVMTNLVRCNKILIEGVTLQNSPAWNLHPLLCTNLTLRNAFIRNANFAQNGDGLDLESC 254
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I GDD + +KSG + G P+ + IR G +GSE S G
Sbjct: 255 RFVDIYGVKFDVGDDAICIKSGKNAIGRKITVPTEHVRIRDCVVYHGHGGFVIGSEMSRG 314
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG----------IKIA 180
V +V+ E+ GI K+ IGRGG + +IT+ ++ M + + ++
Sbjct: 315 VRDVVIENCLFLGTDTGIRFKSAIGRGGVVEDITIRNIQMTDIEEDAIIFTMGYTLFRLD 374
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
D P D + +P ITI+DV + Q+ I GL+ P I L N+ +Q
Sbjct: 375 HQASDEP-DTISKEDIPEFKNITIRDVNCLRAGQAIKIDGLEQMPIHDIILENVMIQA 431
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGGV V AE I +++ I +KT+ GRGG++RN+ +S++ + N I+ G G+HP
Sbjct: 2 SGGVSEVHAEDIYIFDSRSAIRIKTSPGRGGYVRNVYISNMTLANIDIAIRFTGLYGEHP 61
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 247
D+ ++P+ALP++ ITIKDV G V+++GLIQG+K F ICLSNI+L + P
Sbjct: 62 DEAYDPDALPLIERITIKDVIGENVKRAGLIQGIKGYDFVNICLSNISLN---VSSKVPW 118
Query: 248 KCSDVSGSAYQVKPWPCSELSS 269
CSDV G + V P C L
Sbjct: 119 NCSDVKGYSDLVSPEVCEPLKE 140
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN I+ +++ I V NSP W IHPV C NV + V ++ PNTDG+DP+
Sbjct: 180 YLRPNFIQPYRCKNVFIQGVTVMNSPMWQIHPVLCENVTVDGVKVIG--HGPNTDGVDPE 237
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S ++ I++ GDD +A+KSG + G PS I I G+ +GSE S
Sbjct: 238 SCKSMIIKNCLFDNGDDCIAIKSGRNADGRRINVPSENIVIENNEMKDGHGGVTIGSEIS 297
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 183
GGV+NV AE ++ N+ + +KTN RGG ++NI +++ ++ I + +
Sbjct: 298 GGVKNVFAEGNLMDSPNLDRALRIKTNSVRGGVLKNIYFYHNVVKSLKQEVIAIDMEYEE 357
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
GD + K PVV GI + ++ + + +SP TG+ ++N + V P
Sbjct: 358 GDAGEFK------PVVRGIEVDELKSAGGRYGIRVLAYDHSPVTGLKVTNSEINDVNIPM 411
Query: 244 S 244
Sbjct: 412 E 412
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 69
RP +I + I+ + QNSP WNIHP +CS++ VT+L P SPNTDG++P+S
Sbjct: 219 ARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFCSHLKFIGVTVLGPKVSPNTDGLNPES 278
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
+V I S GDD +AVK+G G Y PSS I IR+ I +GSE +
Sbjct: 279 CDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCCMRDGHGSITLGSEMAA 338
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMEN 172
G++N+ A N G+ +KT GRG I I D+ M++
Sbjct: 339 GIKNLQARQCVFLNTDRGLRIKTRRGRGKDAVIDGILFEDIRMDS 383
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 88/164 (53%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ NS+ I++ FQNSP WNIHP+ +++IR + + P S N DG+D +
Sbjct: 236 FLRPVMVSIKNSKRILLDGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWYSQNGDGLDLE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I D+ GDD + KSG D+ G G P+ + ++ G +GSE S
Sbjct: 296 SCKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKNNIVYHGHGGFVIGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GGV NV VG+ K+ GRGG + NI +S++ M N
Sbjct: 356 GGVRNVHISDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIN 399
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 84/147 (57%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L + +++ + V F+NSP W +HP + N+ +TI P+DSPNTDG+DP+S
Sbjct: 222 RPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESC 281
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I S GDD +AVKSG G Y PS I IR+ + + VGSE +GG
Sbjct: 282 KNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCLMENGHGAVTVGSEMAGG 341
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG 157
V+N++ E Y+ G+ +KT GRG
Sbjct: 342 VKNLVVEECRFYDTDRGLRIKTRRGRG 368
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 84/147 (57%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L + +++ + V F+NSP W +HP + N+ +TI P+DSPNTDG+DP+S
Sbjct: 222 RPRLFFLSHCQNVTLCGVTFKNSPSWTLHPYFSDNLKFYGLTINNPSDSPNTDGLDPESC 281
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I S GDD +AVKSG G Y PS I IR+ + + VGSE +GG
Sbjct: 282 KNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCLMENGHGAVTVGSEMAGG 341
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG 157
V+N++ E Y+ G+ +KT GRG
Sbjct: 342 VKNLVVEECRFYDTDRGLRIKTRRGRG 368
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R+ L + RP LI F + I + +V NSP W ++P+ C ++ + V+IL PADSPNT
Sbjct: 122 RREELKYPRPKLISFDHCEHITLRDVRLINSPSWTVNPICCRDITVDNVSILNPADSPNT 181
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD--EYGIAYGHPSSGITIRRVTGSSPFSG 120
DGIDP+S NV I + +I GDD +A+KSG + E +A ITI T
Sbjct: 182 DGIDPESCRNVRISNCHIDVGDDCIAIKSGTEDTEERVA----CENITITNCTMVHGHGA 237
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 171
+ GSE SG + NV + + GI K+ GRGG + ++ V ++ ME
Sbjct: 238 VVFGSEMSGDIRNVTISNCVFQDTDRGIRFKSRRGRGGVVEDVRVDNIVME 288
>gi|413961867|ref|ZP_11401095.1| glycoside hydrolase family protein [Burkholderia sp. SJ98]
gi|413930739|gb|EKS70026.1| glycoside hydrolase family protein [Burkholderia sp. SJ98]
Length = 664
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 21/176 (11%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF+ ++++ + N+PFW HP C NVV+R VT+ DS PN DG D
Sbjct: 332 YLRPCMVEFIGCTNVLMESYRTNNTPFWQHHPTDCRNVVMRSVTV----DSIGPNNDGFD 387
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
PD+ V E+ +TGDD +A+KSG D +YG A H I+ T +S GI +
Sbjct: 388 PDACDTVLCENVTFNTGDDCIAIKSGKDLDTQYGPAQNH-----VIQNCTMNSGHGGITL 442
Query: 124 GSETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GSE GGV+ + A ++ + N + + I +KTN+ RGGF+++ V +V + N
Sbjct: 443 GSEMGGGVQKIYARNLQMLNKFWATNSLNIAIRIKTNMNRGGFVKDFYVDNVTLPN 498
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 10/236 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F +++ V NSPFW IHP +VVIR V + A N DG+DP+ S
Sbjct: 206 RPQFIQFNRCEKVLLEGVKITNSPFWVIHPFMSKDVVIRDVQVFAHGH--NNDGVDPEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ IE+ GDD +AVKSG ++ P+ I IR + +A+GSE SGG
Sbjct: 264 QNMLIENCIFDQGDDAIAVKSGRNQDAWRLNMPTKNIVIRNSLVKNGHQLLAIGSELSGG 323
Query: 131 VENVLAEHINLY---NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK-IAGDVGDH 186
VENV E+ + + ++VKTN RGG++RN+ + ++ KG+ I DV
Sbjct: 324 VENVYMENCEVQEGAKLNHLLYVKTNERRGGYVRNVHMKNIQCGKIDKGVLGIETDVLYQ 383
Query: 187 PDD---KFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D + P+ N I +++V V I+ SP + L NI ++ +
Sbjct: 384 WRDLVPTYERRLTPIEN-IYMENVRAADVAFVSRIKADPESPVEVVQLKNIQVESI 438
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
++ F RP ++ + +++ FQNSP WNIHP+ NV+IR +TI P S N D
Sbjct: 228 EKVKDFLRPVMVSIKECKGVLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNGD 287
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S NV I ++ GDD + KSG +E G G P+ + ++ G V
Sbjct: 288 GLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGMPTENVIVKNNIVYHGHGGFVV 347
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGIK 178
GSE SGGV NV G+ K+ GRGG + NI +SD+ M E R +
Sbjct: 348 GSEMSGGVRNVHVSKCTFMGTDTGLRFKSTRGRGGVVENIYISDIDMIDIPTEPIRFNLF 407
Query: 179 IAGDV------------GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
G+ G+ + + P I +K++ +G GL
Sbjct: 408 YEGNAPVLDDGGNSVPSGEWSEPQPVTEETPSFRNIFMKNIRAHGFGNAGFFMGLPEMNL 467
Query: 227 TGICLSNINLQGVAG 241
+ L N L+G G
Sbjct: 468 QNVHLENALLRGKEG 482
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 110/236 (46%), Gaps = 13/236 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + +N I + + QNS WNIHP+Y SN+ +TI + DSPNTDG++P+S
Sbjct: 219 RPRNVSLVNCSDITVCGLTSQNSAAWNIHPLYSSNLAFYGLTIQSDPDSPNTDGLNPESC 278
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I GDD +A+KSG + PS IT+RR G+ +GSE S G
Sbjct: 279 ENVEIVGCRFQVGDDCIAIKSGKLFLSRRHLRPSRKITVRRCLMEEGHGGVVIGSEISCG 338
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKI----AGDVG 184
V++VL ++ G +KT GRG + + S V ME I D
Sbjct: 339 VQDVLVQNCLFRRTDRGFRIKTRRGRGSTSVVDGVRFSHVKMEQVSHCFVINMFYHCDPD 398
Query: 185 DHPDDKFNPNALPV------VNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSN 233
H D ALPV V IT+ D+ ++ S + GL SP + + N
Sbjct: 399 GHSDLVQCKEALPVGAETPAVQNITLSDICADEIAGSAVFLYGLPESPIRNVTVKN 454
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 19/244 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ R + I+ + ++I V ++SP W IHPV V++R V I+ PNTDG++P+
Sbjct: 210 YLRSSFIQPYQCQQVLIEGVTVKDSPMWQIHPVLSELVIVRGVHIIG--HGPNTDGVNPE 267
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IED Y GDD +A+KSG +E G G PS I IRR G+ +GSE S
Sbjct: 268 SCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGIPSENIVIRRNEMRDGHGGVTIGSEIS 327
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI------A 180
GGV + AE+ ++ N+ + +KTN RGG I +I + +++ + +
Sbjct: 328 GGVRYIYAENNVMDSPNLDRALRIKTNSVRGGTIEHIYFKNNTVKSLKHEVVCIDMMYEE 387
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
GD G H PVV I ++ + + + I +SP T + N + V
Sbjct: 388 GDAGPHR---------PVVRHIQVEGLKSSGGRYGVKIAAYSHSPVTNFNMKNCVIDHVT 438
Query: 241 GPTS 244
P S
Sbjct: 439 YPLS 442
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ F +++ ++FQNSP WN+H ++++ + + P + N DGID +
Sbjct: 225 FLRPVMVNFRECDGVLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNGDGIDIE 284
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +N+ + DS+ GDD + +KSG DE G G P+S I + G VGSE S
Sbjct: 285 SCTNLLLTDSWFDVGDDAICIKSGKDEEGRRRGIPASNIIVDNCVCYHGHGGFVVGSEMS 344
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GGV+N+ + VG+ K+ GRGG + NI + ++ M +
Sbjct: 345 GGVKNIAVSNCRFSGTDVGLRFKSKRGRGGVVENIYIKNIMMND 388
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ + +++I V + +PFW IHPV C N+++R V +L PN DG DP+
Sbjct: 210 FLRPAFVQPYDCENVLIEGVKLRGAPFWQIHPVLCRNLIVRGVDVLG--HGPNNDGCDPE 267
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S IE TGDD +A+ SG +E G P+ I IR G+ VGS+ S
Sbjct: 268 SVDGALIERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCRMKEGHGGVVVGSQIS 327
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGD 185
GG + AE ++ ++ I K N RGG + N D+ + +R + + +
Sbjct: 328 GGARWIFAERCVMDSPDLWYAIRFKNNALRGGLLENFFYRDIDVGTVSRAAVTCDFNYEE 387
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
+ +F +P + + I+ + + QGL +P TG+ L + + GV P+
Sbjct: 388 GANGRF----VPRLRNVVIERLRTKNAARVLDSQGLPGAPVTGVTLRDCSFDGVTQPS 441
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 126/278 (45%), Gaps = 20/278 (7%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
++ F RP ++ S+ +++ FQNSP WNIHP+ +V+IR +T+ P S N D
Sbjct: 220 EKMKDFLRPVMVSIRESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGD 279
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S NV I ++ GDD + KSG D G G P+ + ++ G V
Sbjct: 280 GLDLESCKNVLIYNNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKNNIVYHGHGGFTV 339
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGIK 178
GSE SGG++NV + VG+ K+ GRGG + NI +S + M E R +
Sbjct: 340 GSEMSGGIKNVHVSNCTFMGTDVGLRFKSTRGRGGVVENIWISKINMINIPAEAIRFNMF 399
Query: 179 IAGDV-----GDHPDDKFNPNAL-------PVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
+G+ + +D+ L P I +KD+ T + GL
Sbjct: 400 YSGNAPVLEEDQNAEDEARKEELAPVTEETPSFRNIFMKDIQVTGSGVAAFFMGLPEMKL 459
Query: 227 TGICLSNINL---QGVAGPTSPPLKCSDVSGSAYQVKP 261
+ L N L +G+ + L+ +V+ S Q P
Sbjct: 460 QNVKLENAVLNAEKGITAIDAAGLELMNVNISGTQEIP 497
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 8/236 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP +E + +++I V F N+PFW IHP+ V + VT+ + PN DG DP+ S
Sbjct: 231 RPLFLETLECENVLIQGVTFTNAPFWVIHPLKSKYVTVDGVTV--NSHGPNNDGCDPEYS 288
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I + +TGDD +A+KSG + G PS I + G+ +GSE S G
Sbjct: 289 KYVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIVVENCDMKDGHGGVVMGSEISAG 348
Query: 131 VENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGDHP 187
V NV + +N N+ I +KTN RGGF+ N+ V D+ + ++ + KI G +
Sbjct: 349 VRNVFVRNCTMNSPNLDRAIRIKTNTLRGGFVENVYVKDIEVGQVKEAVLKINTYYGIY- 407
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINLQGVAGP 242
K +P + I +++V + G LIQG + P TGI N+ ++ P
Sbjct: 408 -GKQEGEFIPTIQNINLENVTVENGGKYGLLIQGREEKPVTGISFKNVTIKNADTP 462
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 125/234 (53%), Gaps = 15/234 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP +I+F ++I++ N+ +NSPFW +H + ++ +R ++ + + N DGIDP+
Sbjct: 194 FLRPQMIQFFKCKNILVENIRIENSPFWCLHLLKSESITVRGISY--KSLNYNNDGIDPE 251
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIA-YGHPSSGITIRRVTGSSPFSGIAVGSET 127
+ +V IE+ + GDD +A+K+G D G A PS I IR G+ +GSE
Sbjct: 252 YAKDVLIENVTFNNGDDNIAIKAGRDHEGRANSATPSENIIIRNCNFKG-LHGVVIGSEM 310
Query: 128 SGGVENVLAEHINLYNVGV---GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 184
S GV+NV E N VG GI++KTN RGGFI+N+ V ++ ++ + I +
Sbjct: 311 SAGVQNVYVE--NCKTVGYLKRGIYLKTNADRGGFIKNVFVRNIQLDEVEDCLYITANY- 367
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 237
H + K ++ ++ D+ K +G+ IQG + I L+NI ++
Sbjct: 368 -HGEGK---GFQSEISNVSFSDISCNKASATGIVIQGFPDKKIKNISLNNIEIK 417
>gi|421898567|ref|ZP_16328933.1| polygalacturonase protein [Ralstonia solanacearum MolK2]
gi|206589773|emb|CAQ36734.1| polygalacturonase protein [Ralstonia solanacearum MolK2]
Length = 679
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF+ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 347 YLRPCMVEFIGCTNVLMEAYRTHATPCWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 402
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 403 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 460
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 461 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVMLPN---GVSL 517
Query: 180 AG 181
G
Sbjct: 518 TG 519
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 116/249 (46%), Gaps = 16/249 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L+ F++ ++++ V FQNSP WN+HP+ C NV I +T+ P S N DG+D +
Sbjct: 231 FLRPVLLSFIDCTNVLLQGVTFQNSPSWNLHPLMCENVTIENLTVRNPWYSQNGDGLDIE 290
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N + + GDD + +KSG D G G P + + G VGSE S
Sbjct: 291 SCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCVVYHGHGGFVVGSEMS 350
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN---------ARKGIKI 179
GGV+N+ + VG+ K+ GRGG + NI + ++ M N G K
Sbjct: 351 GGVKNISVSNCQFLGTDVGLRFKSTRGRGGVVENIFIKNIDMINIPTDALLFDLYYGGKS 410
Query: 180 AGDV---GDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLS 232
A +V GD ++ N A+ P ITI V +++ GL + +S
Sbjct: 411 ASEVLADGDEVKEESNIPAVTEETPAFRNITISRVNCQGARRAMYFNGLPEMNVQNVTVS 470
Query: 233 NINLQGVAG 241
+ N+ G
Sbjct: 471 DCNITAQLG 479
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 119/260 (45%), Gaps = 23/260 (8%)
Query: 2 WRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
WR RT+ F+N ++I+I + +NSP W IHP N+ +TI P +SP
Sbjct: 223 WRPRTV---------FLNQCKNILIEGLTIKNSPAWTIHPFQSENLKFINLTIENPQNSP 273
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG++P++S NV I S GDD +A+KSG + G + + +R G
Sbjct: 274 NTDGLNPEASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLGKLTEKVFVRNCYMEYGHGG 333
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+ +GSE SGGV+ V E N GI +KT GRGGFI I + M + I
Sbjct: 334 VVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTIN 393
Query: 181 GDVGDHPDDK----FNPNALPV------VNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGI 229
D K ++ LP+ + I +KD+ T Q +G + GL +
Sbjct: 394 SFYFCDSDGKTEYVWSKEKLPIDKRTPYIGNIYLKDIGCTNTQVAAGFMYGLPERKIEKV 453
Query: 230 CLSNI--NLQGVAGPTSPPL 247
+ NI + A P P +
Sbjct: 454 IMENIYVHFDENAKPGYPEM 473
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ F + +++ + V F+NSP W +HP+ C NV I + + P + N D +D +S
Sbjct: 179 RPVLLNFTSCKNVKLEGVTFKNSPAWCVHPLLCENVTIDNIKVNNPWYAQNGDALDVESC 238
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I +S GDD + +KSG +E G G P + I+ T G +GSE SGG
Sbjct: 239 KNVVIINSLFDAGDDAICIKSGKNEAGRRRGVPCENVYIKNNTVLHGHGGFVIGSEMSGG 298
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDVGDHP 187
V+N+ VG+ K+ GRGG + NI + + M+N + + P
Sbjct: 299 VKNIYISDCTFIGTDVGLRFKSARGRGGVVENIYIDRINMKNIVNEAITMNLYYSSNGKP 358
Query: 188 DDKFNPN-ALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTS 244
++ + N PV I +K++ +S + GL P I + N+ + +A +S
Sbjct: 359 AERTDVNEGTPVFRNIEMKNLLVEGAGKSFYLYGLPEMPLENISIQNMRVSKIAETSS 416
>gi|300697434|ref|YP_003748095.1| Polygalacturonase [Ralstonia solanacearum CFBP2957]
gi|299074158|emb|CBJ53703.1| Polygalacturonase [Ralstonia solanacearum CFBP2957]
Length = 679
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF+ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 347 YLRPCMVEFIGCTNVLMEAYRTHATPCWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 402
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 403 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 460
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 461 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVMLPN---GVSL 517
Query: 180 AG 181
G
Sbjct: 518 TG 519
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++ + S+ I++ V F+NSP W IHP+ C ++ + V + P S N D +D +
Sbjct: 236 WLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV + + + GDD + +KSG DE G G P + I+ T G +GSE S
Sbjct: 296 SCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFVIGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM---ENARKGIKIAGDVGD 185
GGV NV + VG+ K+ GRGG + NI + ++ M N + + V D
Sbjct: 356 GGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDISNDALTMDLYYAVND 415
Query: 186 HPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
P+ P+ PV I I +V +++ GL P I + N+ +
Sbjct: 416 FPETPI-PDVNEETPVFRNIYISNVLCRGAERAVYFNGLPEMPLKNIFIKNMTV 468
>gi|410684707|ref|YP_006060714.1| Polygalacturonase [Ralstonia solanacearum CMR15]
gi|299069196|emb|CBJ40456.1| Polygalacturonase [Ralstonia solanacearum CMR15]
Length = 683
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF++ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 351 YLRPCMVEFIDCTNVLMEAYRTHATPCWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 406
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 407 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 464
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+ + A ++ + N + + I +KTN+ RGG++R+ + DV + N G+ +
Sbjct: 465 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYIDDVTLPN---GVSL 521
Query: 180 AG 181
G
Sbjct: 522 TG 523
>gi|83748914|ref|ZP_00945924.1| PehC [Ralstonia solanacearum UW551]
gi|207739187|ref|YP_002257580.1| polygalacturonase protein [Ralstonia solanacearum IPO1609]
gi|83724413|gb|EAP71581.1| PehC [Ralstonia solanacearum UW551]
gi|206592560|emb|CAQ59466.1| polygalacturonase protein [Ralstonia solanacearum IPO1609]
Length = 678
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF+ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 346 YLRPCMVEFIGCTNVLMEAYRTHATPCWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 401
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 402 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 459
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 460 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVMLPN---GVSL 516
Query: 180 AG 181
G
Sbjct: 517 TG 518
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 114/235 (48%), Gaps = 18/235 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F S ++++ + NSPFW IH N++IR + + A N DG+DP+ S
Sbjct: 207 RPQFIQFNRSENVLLEGISITNSPFWTIHTYLSKNIIIRNLNVYAHGH--NNDGVDPEMS 264
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ GDD +A+KSG + G PS I IR T + IA+GSE SGG
Sbjct: 265 QNVLIENCVFDQGDDAIAIKSGRNPEGWRLKAPSKNIIIRNCTVKNGHQLIAIGSELSGG 324
Query: 131 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
+ENV + + + + + +KTN GG++RNI Y N + G G +G
Sbjct: 325 IENVFVDSCVVMDGAKLNHLLFIKTNERMGGYVRNI-----YASNLQAGRIELGILGIET 379
Query: 188 DDKFN-PNALPVVNG--ITIKDVW-----GTKVQQSGLIQGLKNSPFTGICLSNI 234
D + N +P V IKDV+ VQ I G K P I L N+
Sbjct: 380 DVLYQWRNLVPTVERRLTPIKDVYLNNVTAKNVQFVSRILGQKELPIENIVLKNV 434
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 121/236 (51%), Gaps = 20/236 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP +I+F +++++ ++ +SPFW IHPV+C NV +R V I +++ N DG DP+
Sbjct: 201 YLRPCMIQFYGCKNVLVEDLKIYDSPFWIIHPVFCDNVTVRNVYI--DSNNYNNDGCDPE 258
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +NV IE + GDD +A+KSG D+ G G + + IR + I VGSE S
Sbjct: 259 SCTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR--WAITVGSEMS 316
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDV---- 183
GGV N+ E + + GI+ K+N RGG+ N+ + + + G I +
Sbjct: 317 GGVRNIYIEDCKIDSCRNGIYFKSNPDRGGYFENLNMRRIEADVCLWGVINFRTNYHGYR 376
Query: 184 -GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINLQ 237
G+HP + I I+DV +V L+ GL + I L NIN++
Sbjct: 377 GGNHP---------TLFRNICIEDVTCNRVDSVALMANGLPEAKLHNITLRNINVK 423
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP +I R + + + +NSP WNIHP + ++ + +L P DSPNTDG+DP+S
Sbjct: 223 RPRMIFLERCRQVTVQGITVRNSPSWNIHPYFSDHLRFFDLKVLNPKDSPNTDGLDPESC 282
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I Y S GDD +AVKSG G Y PS I+IRR + +GSE +GG
Sbjct: 283 QDVEIAGVYFSLGDDCIAVKSGKIYMGSTYKRPSKDISIRRCCMRDGHGSVTIGSEMAGG 342
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
V+N+ + + G+ +KT GRG ++ V + E+ R
Sbjct: 343 VKNLTVKDCMFLHTDRGLRIKTRRGRG---KDAVVDGIVFEHIR 383
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 125/235 (53%), Gaps = 8/235 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP IE +++I ++ N+PFW +HP+ +NVV+ +T+ + PN DG DP+
Sbjct: 216 FLRPTFIEPFGCENVLIKDITIINAPFWVVHPIKSNNVVVDGITV--DSHGPNNDGCDPE 273
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ NV I++ +TGDD +A+KSG +E G PS I + G+ +GSE S
Sbjct: 274 YAKNVWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCKMIDGHGGVVMGSEIS 333
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI-KIAGDVGD 185
GV NV ++ + N+ I +KTN RGGF+ N+ V ++ + ++ + KI G
Sbjct: 334 AGVRNVFVQNCQMDSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYGI 393
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINLQGV 239
+ K + +P V+ + ++++ + G L+ G + SP + L N+ ++ V
Sbjct: 394 YGVQK--GSFMPKVSNVYLENIAVDNGGKYGVLVNGYEESPVKNVFLKNVTIKKV 446
>gi|386336153|ref|YP_006032323.1| polygalacturonase [Ralstonia solanacearum Po82]
gi|334198603|gb|AEG71787.1| polygalacturonase [Ralstonia solanacearum Po82]
Length = 686
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF+ ++++ +PFW HP C+NVVIR VT+ DS PN DG D
Sbjct: 354 YLRPCMVEFIGCTNVLMETYRTHATPFWQHHPTDCTNVVIRGVTV----DSIGPNNDGFD 409
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ NV ED +TGDD +A+KSG AYG P+ I+ +S GI +GSE
Sbjct: 410 PDACDNVLCEDMTFNTGDDCIAIKSG-KNLDTAYG-PAQNHVIQDCIMNSGHGGITLGSE 467
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V +V + N G+ +
Sbjct: 468 MGGGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFYVDNVTLPN---GVSL 524
Query: 180 AG 181
G
Sbjct: 525 TG 526
>gi|17549054|ref|NP_522394.1| polygalacturonase transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|17431305|emb|CAD17984.1| polygalacturonase transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|219566923|dbj|BAH04954.1| polygalacturonase [Ralstonia solanacearum]
Length = 680
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 18/182 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGID 66
+ RP ++EF+ ++++ +P W HP C+NVVIR VT+ DS PN DG D
Sbjct: 348 YLRPCMVEFIGCTNVLMEAYRTHATPCWQHHPTDCANVVIRGVTV----DSIGPNNDGFD 403
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
PD+ SNV ED +TGDD +A+KSG YG P+ IR +S GI +GSE
Sbjct: 404 PDACSNVLCEDMTFNTGDDCIAIKSG-KNLDTGYG-PAQDHVIRNCIMNSGHGGITLGSE 461
Query: 127 TSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V DV + N G+ +
Sbjct: 462 MGGGVQRIYARNLTMRNAFYATDPLNIAIRIKTNMNRGGYVRDFYVDDVTLPN---GVSL 518
Query: 180 AG 181
G
Sbjct: 519 TG 520
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI + +I + + +NSP WNIHP + ++ +TIL P DSPNTDG+DP+S
Sbjct: 221 RPRLIFLNHCNNITVQGITVKNSPCWNIHPYFSDDLKFVDLTILNPKDSPNTDGLDPESC 280
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I Y S GDD +A+KSG G + PS + IR+ I +GSE +GG
Sbjct: 281 KNVLIVGVYFSLGDDCIAIKSGKIYMGAKHKRPSENLEIRQCCMRDGHGSITIGSEMAGG 340
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
V+N+ + G+ +KT GRG ++ + V EN R
Sbjct: 341 VKNLTVRECLFIHTDRGLRIKTRRGRG---KDAIIDGVLFENIR 381
>gi|170697849|ref|ZP_02888934.1| glycoside hydrolase family 28 [Burkholderia ambifaria IOP40-10]
gi|170137236|gb|EDT05479.1| glycoside hydrolase family 28 [Burkholderia ambifaria IOP40-10]
Length = 664
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ + QN+PFW HP NVV+R VT + PN DG DPD
Sbjct: 332 YLRPCMVEFIGCTNVLMEHYQTQNTPFWQHHPTASRNVVMRGVTTNS--IGPNNDGFDPD 389
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V E +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 390 ACTDVLCEGCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRNCTMNSGHGGITLGS 444
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 445 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN---GVT 501
Query: 179 IAG 181
+ G
Sbjct: 502 LKG 504
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 118/258 (45%), Gaps = 23/258 (8%)
Query: 2 WRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
WR R++ F+NS +++I + NSP W IHP +N+ + I PADSP
Sbjct: 218 WRPRSI---------FLNSCENVVIEGIKIMNSPSWTIHPFLTNNLRFINLKIENPADSP 268
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDGIDP+S NV S GDD +A+KSG G PS I+ + G
Sbjct: 269 NTDGIDPESCENVEYIGIDFSVGDDCIAIKSGKLYLGKVLNKPSKNFIIKNCSMKYGHGG 328
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIK 178
+ +GSE SGGVEN+ E + Y GI +KT GRG G I I V ++ M+ +
Sbjct: 329 VVIGSEMSGGVENINIEKCDFYKTDKGIRIKTRRGRGENGVIDGIYVKNISMKEVKVPFV 388
Query: 179 IAGDVGDHPDDK----FNPNALPV------VNGITIKDVWGTK-VQQSGLIQGLKNSPFT 227
PD K + LPV + I+ +++ + +G + GL P
Sbjct: 389 FNSFYFCDPDGKTEYVYTKEKLPVDERTPSIKNISFENIKAEDTLVCAGFLYGLPEKPIE 448
Query: 228 GICLSNINLQGVAGPTSP 245
+ N+ + G +P
Sbjct: 449 NVKFKNVEVDFKDGEVTP 466
>gi|116619804|ref|YP_821960.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222966|gb|ABJ81675.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 13/269 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ I FMN++++++ +V +P + +H +Y N +R V I P+ + I DSS
Sbjct: 203 RPSFICFMNAKNVLVEDVRIIGAPMFVVHLLYTENATVRNVMI-QTYPGPHANAIVADSS 261
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I DSYI TGDD + +KSG D GI P+ +TI T + +GSET+G
Sbjct: 262 RFVHISDSYIDTGDDGIVLKSGKDADGIRVNRPTEHVTITNCTVHHAHGAVVIGSETAGS 321
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD--VGDHPD 188
+ +V+A +I + GI +K+ GRGG + ++ + MEN GI + +G D
Sbjct: 322 IRDVVASNITAIDTENGIRIKSRRGRGGTVDDLRFDNWTMENVGTGIVVTSYYVMGGESD 381
Query: 189 DKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSP- 245
K P P I I +V ++ I GL P TG+ L+++ G G T+
Sbjct: 382 TKEEPVSERTPKFRNIGISNVTIHGAKKVVDIDGLPEMPITGLRLTDVAGSGKVGLTARY 441
Query: 246 -------PLKCSDVSGSAYQVKPWPCSEL 267
L+ + SG+ +Q + EL
Sbjct: 442 TDGLELHHLQVNAESGAPFQFESATNLEL 470
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 117 bits (292), Expect = 8e-24, Method: Composition-based stats.
Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 10/258 (3%)
Query: 2 WRQRTLPF---TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD 58
W QR R L+ F+ S I+I ++ NSPFW IHP+ N+ + + D
Sbjct: 198 WDQRKFGMGKGLRSQLVNFVESDGILIKDLHLVNSPFWVIHPLLSKNITVD--GVFVQND 255
Query: 59 SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF 118
PN DG DP++ V I++ TGDD +A+KSG + G + PS I IR +
Sbjct: 256 GPNGDGCDPEACDGVLIQNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCKMADGH 315
Query: 119 SGIAVGSETSGGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 176
G+ +GSE SGG NV AE +++ ++ + +KTN RGG I NI + +V + +
Sbjct: 316 GGVVIGSEISGGCRNVFAEDCYMDSPHLDRVLRIKTNNCRGGLIENINMRNVTVGQCNEA 375
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNIN 235
+ + ++ P ++ P V + +++V + + I GL N I + N
Sbjct: 376 V-LRINLDYEPREECYRGFEPTVRKVYMENVTSKESKYGVQIIGLNNIENVYDITVKNCK 434
Query: 236 LQGVA-GPTSPPLKCSDV 252
GV+ P S K D+
Sbjct: 435 FDGVSKAPVSISGKTRDI 452
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 117/242 (48%), Gaps = 18/242 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F +I++ V NSPFW IHP +VV+R + + A N DG+DP+ S
Sbjct: 207 RPQFIQFNRCENILMDGVTITNSPFWTIHPFLSKDVVLRNLKVYAHGH--NNDGVDPEMS 264
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ GDD +A+KSG ++ S I +R T + +A+GSE SGG
Sbjct: 265 QNVLIENCIFDQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCTVKNGHQLVAIGSELSGG 324
Query: 131 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
+ENV ++ + + + + +KTN RGG+ VS++YM N G AG +G
Sbjct: 325 IENVFIDNCTVVDGAKLNHLLFIKTNERRGGY-----VSNIYMSNIVSGKIDAGILGIDT 379
Query: 188 DDKFN--------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D + L + I + ++ T V+ I G K P I L N+ + V
Sbjct: 380 DVLYQWRDLVPTIERRLTPIKNIYLDNIKATNVKFISKISGQKELPVENIFLKNVTVDVV 439
Query: 240 AG 241
G
Sbjct: 440 QG 441
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 114/252 (45%), Gaps = 17/252 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ + +++ FQNSP WNIHP+ NVVIR + + P S N DG+D +
Sbjct: 231 FLRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRNPWYSQNGDGLDLE 290
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N + ++ GDD + KSG ++ G G P+ + ++ T G VGSE S
Sbjct: 291 SCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKNNTVYHAHGGFVVGSEMS 350
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-----ARKGIKIAG-- 181
GGV NV + VG+ K+ GRGG + NI +SD+ M N R + G
Sbjct: 351 GGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIHISDIDMINIPTDAIRFNMFYGGNS 410
Query: 182 ----DVGDHPDDKFNPNALPVV------NGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 231
+ D D+ + +PV I +K++ T + GL + L
Sbjct: 411 PVLEEDQDAEDEARDETIVPVTEETPAFKDIYMKNITATGSGTAAFFMGLPEKSLENVRL 470
Query: 232 SNINLQGVAGPT 243
N L+ G T
Sbjct: 471 ENALLEAKNGIT 482
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 11/173 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F S+ I++ + +NSPFW IHP S+V+IR V + A N DG+DP+ S
Sbjct: 204 RPQFIQFNRSKHILLEGIAIENSPFWVIHPYLSSDVIIREVNVFAHGH--NNDGVDPEMS 261
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ GDD +AVK+G ++ P I IR + + +A+GSE SGG
Sbjct: 262 QNVLIENCVFDQGDDAIAVKAGRNQDAWRLNTPVKNIVIRDCSVKNGHQLLAIGSELSGG 321
Query: 131 VENV------LAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
VENV +A + L ++ + +KTN RGG+++NI + D+ KGI
Sbjct: 322 VENVYMGNCEVAPNAKLNHL---LFIKTNERRGGYVKNIYMEDIKAGRIDKGI 371
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP LI F + + I + +V NSP W ++P+ C ++ + + I PADSPNTDGID
Sbjct: 125 LEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGID 184
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S NV I + I GDD +A+KSG +E ITI G+ +GSE
Sbjct: 185 PESCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLHGHGGVVLGSE 242
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
SG + NV + + GI +K+ GRGG I +I V+++ M+N
Sbjct: 243 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGIIEDIRVNNLIMDN 288
>gi|115359649|ref|YP_776787.1| glycoside hydrolase family protein [Burkholderia ambifaria AMMD]
gi|115284937|gb|ABI90453.1| glycoside hydrolase, family 28 [Burkholderia ambifaria AMMD]
Length = 665
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ + QN+PFW HP NVV+R VT + PN DG DPD
Sbjct: 333 YLRPCMVEFIGCTNVLMEHYQTQNTPFWQHHPTASRNVVMRGVTTNS--IGPNNDGFDPD 390
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ ++V E +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 391 ACTDVLCERCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRDCTMNSGHGGITLGS 445
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 446 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN---GVT 502
Query: 179 IAG 181
+ G
Sbjct: 503 LKG 505
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 22/244 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN IE +++I + N+PFW +HP+ N+++ V I + PN DG+DP+
Sbjct: 232 YLRPNFIEPFECENVLIQGITIINAPFWILHPIKSKNIIVDGVNI--RSHGPNNDGLDPE 289
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I++S +TGDD +A+K+G DE G G + I +R G+ +GSE S
Sbjct: 290 YSQNVLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCKMIDGHGGVVIGSEMS 349
Query: 129 GGVENVLA--EHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAG 181
GV NV H++ + I +KTN RGG +++N+TV +V + I
Sbjct: 350 AGVRNVFVYNNHMDSPELDRAIRLKTNNVRGGVVDGVYVKNLTVGEV----KEAVLHITM 405
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQ 237
+ D+ + N P + I ++DV KV+ G GL+NS I N+ +
Sbjct: 406 NYKDYKNR--TGNFTPQIRNILLEDV---KVKNGGKYAIFADGLENSKIQNITFKNVTID 460
Query: 238 GVAG 241
V
Sbjct: 461 KVKA 464
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP++++F S +++ V ++P W H +Y ++ +R VT+ PN DG+ D
Sbjct: 204 YLRPSMLQFYESSDVLVEGVTIVDAPMWVNHFIYSDDITVRDVTV--KTHRPNNDGVAID 261
Query: 69 SSSNVCIEDS-YISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
SSS+V +E++ + GDD V VKSG DE G G PS I +R S G A+GSE
Sbjct: 262 SSSDVLVENNDFQGIGDDCVVVKSGRDEDGRRVGRPSENIVVRGNRMSGTEGGFAIGSEM 321
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV---- 183
SGGV V E + +G +++K N+ RGG + + + D+ + A K ++ D
Sbjct: 322 SGGVNTVFVERNTMDTIGSALYIKANLDRGGVVERVRIRDITVGTAEKVLRFQTDYSGYQ 381
Query: 184 -GDHP 187
G+HP
Sbjct: 382 GGNHP 386
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN + F S++I++ + SP WNIH VY N ++R +T+ + DS N DG+ DSS
Sbjct: 216 RPNFVVFWKSKNILVEGITLNESPMWNIHLVYSQNAIVRDITVNS-LDSQNGDGVVVDSS 274
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRV------TGSSPFSGIAVG 124
+V +E + + TGDD + +KSG++E G+A P+ + IR TGS G+ G
Sbjct: 275 HDVLLEYNQLHTGDDAIVLKSGFNEDGLAINIPTENVVIRNYYAYKVRTGS---GGVVFG 331
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
SETSGG+ NV GI KT GRG I NI V D+ M++
Sbjct: 332 SETSGGIRNVYVHDAVFEKCDRGIRFKTARGRGNVIENIFVRDISMKD 379
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 114/245 (46%), Gaps = 21/245 (8%)
Query: 2 WRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
WR RT+ F+N ++I+I V +NSP W IHP N+ +TI P +SP
Sbjct: 223 WRPRTV---------FLNQCKNILIEGVTIKNSPAWTIHPFQSENLKFINLTIENPKNSP 273
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG++P++S NV I S GDD +A+K+G + G + + +R G
Sbjct: 274 NTDGLNPEASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLGKLTEKVFVRNCYMEYGHGG 333
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
+ +GSE SGGV+ V E N GI +KT GRGGFI I + M + I
Sbjct: 334 VVIGSEMSGGVKEVYVEKCIFNNTDRGIRIKTRRGRGGFIDEIHADKIRMNRVKTPFTIN 393
Query: 181 G----DVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGI 229
DV + ++ LP+ + I +K++ T Q +G I GL +
Sbjct: 394 SFYFCDVDGKTEYVWSKEKLPIDERTPYIGNIYLKNINCTDTQVAAGFIYGLPERKIEKV 453
Query: 230 CLSNI 234
+ I
Sbjct: 454 IMEEI 458
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + RP LI F + + I + +V NSP W ++P+ C ++ + + I PADSPNTDGID
Sbjct: 125 LEYPRPKLISFDSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKNPADSPNTDGID 184
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+S NV I + I GDD +A+KSG +E ITI G+ +GSE
Sbjct: 185 PESCKNVRISNCLIDVGDDCIAIKSGTEETKERVS--CENITISNCQMLHGHGGVVLGSE 242
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
SG + NV + + GI +K+ GRGG I +I V+++ M+N
Sbjct: 243 MSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGVIEDIRVNNLIMDN 288
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI N R I+I V QNSP W IHP++ N+ + + ++ P DSPNTDGI+P+S
Sbjct: 223 RPRLIFIKNCRDILIEEVTVQNSPSWTIHPMFSQNLQLINLKVINPKDSPNTDGINPESC 282
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I S GDD +A+KSG G S I IR GI +GSE +GG
Sbjct: 283 QNVKIIGVDFSVGDDCIAIKSGKLYLGQRLKIASQDIMIRNCHMKFGHGGIVIGSEMAGG 342
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
V+NV A GI +KT GRG G I I ++ M+ I PD
Sbjct: 343 VKNVSAIRCIFEETDRGIRIKTRRGRGKDGVINGINAENIVMKKVLTPFVINTFYFCDPD 402
Query: 189 DKFN----------PNALPVVNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNINL 236
K PVV + +K++ + +G I GL I L +I +
Sbjct: 403 GKTEYVWSKEKLPVDERTPVVKNVYLKNMICEDCEVAAGFIYGLPECKIENIILEDIKV 461
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 6/229 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+ + M SR+++I + F SP W IH +Y NVV+R V I+ +TDGI DSS
Sbjct: 187 RPSFVRTMESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDV-IIETYPGVHTDGIAVDSS 245
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I + YI TGDD + +K+G D G+ P+ ++I + + +GSETSG
Sbjct: 246 RNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGAVTIGSETSGW 305
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV---GDHP 187
V N++A +I +G+ +K+ GRGG + ++ + MEN + I G+ P
Sbjct: 306 VRNLVASNITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKP 365
Query: 188 DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
+ P N PV I I ++ + + I+GL + + +S+
Sbjct: 366 ANDPEPVSNRTPVFRNIAISNMTVNHARVAIDIEGLPEMNVSNLRISDF 414
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 114/237 (48%), Gaps = 22/237 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP LI+F ++I + V NSPFW IH + N++ R + A N DGIDP+
Sbjct: 198 YLRPQLIQFFACKNITLEGVFITNSPFWCIHLLKSENIICR--GLRYDAKLVNNDGIDPE 255
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ N+ IE+ + GDD VA+K G D G PS I IR G+ +GSE S
Sbjct: 256 FTRNLLIENIEFNNGDDNVAIKCGRDNDGWTTARPSENIIIRNCKFKG-LHGVVLGSEMS 314
Query: 129 GGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD-- 185
GV+NV E+ GI++KTN RGGFIRNI Y+ N R G+V D
Sbjct: 315 AGVQNVFIENCTYGGYCKRGIYIKTNPDRGGFIRNI-----YVNNCR-----FGEVEDLF 364
Query: 186 -----HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 236
+ + + V+ I +KDV K + L+ QG P + N+N+
Sbjct: 365 YATSMYAGEGMDNTHFTEVHDIYVKDVTCQKASAAALVLQGTTVKPIYNVRFENVNV 421
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 116/235 (49%), Gaps = 8/235 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I ++I++ SPFW IHP+ NV I+ V + + PN DG DP+S
Sbjct: 176 RPQFINLYKCKNILLEGFTINRSPFWLIHPLLSENVTIKGVKM--QSHGPNNDGCDPESC 233
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IED TGDD +A+KSG DE G + P I +R +G+A+GSE +GG
Sbjct: 234 ENVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPCKNIIVRECRMKDGHAGVAIGSEITGG 293
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
NV E+ + + + I +K+N RGG + N+ V ++ + ++ I H D
Sbjct: 294 CHNVWVENCRMDSPELDRIIRIKSNPMRGGNVANVFVRNITVGECKQSILGIEQKYWHVD 353
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKN-SPFTGICLSNINLQGVAGP 242
+ P LP+ I ++++ K Q + G + S I L + + +GV P
Sbjct: 354 E--GP-YLPLFENIHLENITSKKSQYVLHLDGFDDKSQIRNIYLKDCSFEGVEKP 405
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 7/234 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++ + S+ I++ V F+NSP W IHP+ C ++ + V + P S N D +D +
Sbjct: 236 WLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV + + + GDD + +KSG DE G G P + I+ T G +GSE S
Sbjct: 296 SCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFVIGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM---ENARKGIKIAGDVGD 185
GGV NV + VG+ K+ GRGG + NI + ++ M N + + V D
Sbjct: 356 GGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMDLYYAVND 415
Query: 186 HPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
P+ P+ PV I I +V ++ GL P I + N+ +
Sbjct: 416 SPETPI-PDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNILIKNMTV 468
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++ R I + +N+ W IHP C +++ +TI AP DSPNTDG +P+S
Sbjct: 228 RPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESC 287
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETS 128
NV I S GDD +AVK+G H + GI +R G+ +GSE S
Sbjct: 288 RNVTISGVRFSVGDDCIAVKAGKRSPDGEDDHLAETRGIRVRHCLMERGHGGLVIGSEMS 347
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV---GD 185
GGV +V E ++ G+ +KT GRGG + NI + V ++ + + D
Sbjct: 348 GGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHYHCDAD 407
Query: 186 HPDDKFNP-------NALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINL 236
D++ P ++GI ++DV + +G+ GL +P + + N+ +
Sbjct: 408 GHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTI 466
>gi|172064462|ref|YP_001812113.1| glycoside hydrolase family protein [Burkholderia ambifaria MC40-6]
gi|171996979|gb|ACB67897.1| glycoside hydrolase family 28 [Burkholderia ambifaria MC40-6]
Length = 664
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ + QN+PFW HP NVV+R VT + PN DG DPD
Sbjct: 332 YLRPCMVEFIGCTNVLMEHYQTQNTPFWQHHPTASRNVVMRGVTTN--SIGPNNDGFDPD 389
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWD---EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
+ + V E +TGDD +A+KSG D EYG A H IR T +S GI +GS
Sbjct: 390 ACTAVLCEGCTFNTGDDCIAIKSGKDRDTEYGPAKRH-----LIRDCTMNSGHGGITLGS 444
Query: 126 ETSGGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK 178
E GGVE + A ++++ N + + I VKTN+ RGG++++ V V + N G+
Sbjct: 445 EMGGGVEQIYATNLSMLNANWQTNPLNIAIRVKTNMNRGGYVKDFHVKGVTLPN---GVT 501
Query: 179 IAG 181
+ G
Sbjct: 502 LKG 504
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 114/243 (46%), Gaps = 11/243 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I + +I I + +NSP W +HPV+ SN+ + I P DSPNTDGIDP+S
Sbjct: 219 RPRTIFLTDCSNINIVGINIENSPSWTLHPVFSSNLGFFDMKIRNPKDSPNTDGIDPESC 278
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I S GDD +A+KSG + G G PS I I G+ +GSE SGG
Sbjct: 279 KNVSIIGVKFSVGDDCIAIKSGKGKIGREIGIPSENINIENCHMEFGHGGVVIGSEMSGG 338
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
++NV ++ N G+ +KT GRGG I I ++ M+ I D K
Sbjct: 339 IKNVNIKNCLFENTDRGLRIKTRRGRGGIIDGIHAENIVMDKVLTPFVINEFYYCDSDGK 398
Query: 191 ----FNPNAL------PVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINLQGV 239
+N + L PV+ IT K++ + +G + GL + L N+ +
Sbjct: 399 TEYVWNKDKLEITEETPVIKNITFKNMVCKNSEVCAGFMYGLPERKIERVVLENLTIDFA 458
Query: 240 AGP 242
P
Sbjct: 459 EDP 461
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 7/234 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++ + S+ I++ V F+NSP W IHP+ C ++ + V + P S N D +D +
Sbjct: 236 WLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV + + + GDD + +KSG DE G G P + I+ T G +GSE S
Sbjct: 296 SCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKNNTVLHGHGGFVIGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM---ENARKGIKIAGDVGD 185
GGV NV + VG+ K+ GRGG + NI + ++ M N + + V D
Sbjct: 356 GGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMDLYYAVND 415
Query: 186 HPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
P+ P+ PV I I +V ++ GL P I + N+ +
Sbjct: 416 SPETPI-PDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 116/251 (46%), Gaps = 13/251 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++F ++I V + SPFW +HPV C NVV+R V I PN DG DP+
Sbjct: 228 YLRPAFVQFYACDRVLIEGVKLRRSPFWQVHPVLCRNVVVRGVDIHGLG--PNNDGCDPE 285
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + IE TGDD +AV SG + G P+ I IR G+ VGS+ S
Sbjct: 286 SVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNIVIRDCRMKEGHGGVVVGSQIS 345
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYM-ENARKGIKIAGDVGD 185
GG ++ AE + ++ I K N RGG + + D+ + + +R I + +
Sbjct: 346 GGARHIYAERCTMDSPDLWYAIRFKNNALRGGLLEHFYFRDLTVGQVSRAAITCDFNYEE 405
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT-- 243
D F PV+ I ++ + + + QGL +P + + + GV P+
Sbjct: 406 GADGPFK----PVLRDILVQRMTVARAARVLDSQGLPGAPVGTVRIEDSRFDGVTHPSIL 461
Query: 244 --SPPLKCSDV 252
SP ++ S V
Sbjct: 462 AHSPDIRLSRV 472
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 123/237 (51%), Gaps = 12/237 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN IEF + ++ ++ NSPFW +HP+ +N++I VT+ + PN DG DP+
Sbjct: 233 YLRPNFIEFFECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTV--NSHGPNNDGCDPE 290
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N+ I + +TGDD +A+K+G D G PS I ++ G+ +GSE S
Sbjct: 291 YSQNILIRNCTFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCKMIDGHGGVVIGSEIS 350
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
GV NV E+ ++ N+ I +KTN RGG I NI V ++ + ++ + + ++ +
Sbjct: 351 AGVNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECV-LKLNMFYN 409
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSG----LIQGLKNSPFTGICLSNINLQGV 239
N +P + +++++V V+ G +G SP I L N+ +Q V
Sbjct: 410 VYGSQTGNFIPTIRNVSLENV---TVKNGGKYSVWAEGYAESPVENITLKNVKIQKV 463
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++ R I + +N+ W IHP C +++ +TI AP DSPNTDG +P+S
Sbjct: 226 RPRGLHLVSCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTINAPHDSPNTDGFNPESC 285
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETS 128
NV I S GDD +AVK+G H + GI +R G+ +GSE S
Sbjct: 286 RNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGIRVRHCLMERGHGGLVIGSEMS 345
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV---GD 185
GGV +V E ++ G+ +KT GRGG + NI + V ++ + + D
Sbjct: 346 GGVHDVSVEDCDMVGTDRGLRLKTRRGRGGIVSNIAMRRVLLDGVQTALSANAHYHCDAD 405
Query: 186 HPDDKFNP-------NALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINL 236
D++ P ++GI ++DV + +G+ GL +P + + N+ +
Sbjct: 406 GHDERVQSRQPAPIDKGTPFIDGIIVEDVEIRNLAHAAGVFLGLPEAPIRNVAIRNLTI 464
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D +D +
Sbjct: 239 WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLE 298
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + I ++ GDD + +KSG DE G G P + + T G VGSE S
Sbjct: 299 SCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMS 358
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 359 GGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 124/247 (50%), Gaps = 26/247 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+ S++I+I +V NSPFW I+PV C N+ + I + N DG+DP+S
Sbjct: 241 RPPFIQPYKSKNILIKDVKIINSPFWEINPVLCENIKVD--NIKVGTNLYNNDGVDPESC 298
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++ IE+ Y TGDD +A+KSG + G G P+ + IR GI +GSE SGG
Sbjct: 299 KDMIIENCYFLTGDDCIAIKSGRNNEGRNIGVPTENVIIRYNEFKDGHGGITIGSEISGG 358
Query: 131 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA------G 181
V ++ A H N ++ + I KTN RGG + NI V + + ++ + A G
Sbjct: 359 VNDIFA-HDNYFDSKELDYPIRFKTNAERGGKLENIYVKNSTVNKSKIAVIHADFFYEEG 417
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPFTGICLSNINL 236
GDH P++ IT++++ + + + I+G +++P I + + L
Sbjct: 418 TNGDHK---------PILRNITLENIKTVEGGSIDAKNALYIKGFEHAPIENIVIEDAIL 468
Query: 237 QGVAGPT 243
GV G
Sbjct: 469 NGVNGEA 475
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN++ N R +++ N FQNSP WN+H +YC + + V + + N DG+D +
Sbjct: 208 YLRPNMVVLRNCRKVLLQNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDIE 267
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S S V +++S + GDD + +KSG DE G G S I I G +GSE S
Sbjct: 268 SCSYVEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHDNVVYKAHGGFVIGSEMS 327
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GG ++ + + VG+ KT GRGG + NI + ++ M +
Sbjct: 328 GGAHDIFVTNCSFIGTDVGLRFKTQRGRGGVVENIYIKNISMRD 371
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D +D +
Sbjct: 239 WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLE 298
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + I ++ GDD + +KSG DE G G P + + T G VGSE S
Sbjct: 299 SCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMS 358
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 359 GGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D +D +
Sbjct: 239 WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLE 298
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + I ++ GDD + +KSG DE G G P + + T G VGSE S
Sbjct: 299 SCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMS 358
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 359 GGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D +D +
Sbjct: 239 WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLE 298
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + I ++ GDD + +KSG DE G G P + + T G VGSE S
Sbjct: 299 SCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMS 358
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 359 GGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ +++ F+NSP W +HP+ C N+ I VT+ P S N D +D +
Sbjct: 239 WLRPVLLSFIKCNKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLE 298
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + I ++ GDD + +KSG DE G G P + + T G VGSE S
Sbjct: 299 SCNKALIINNSFDAGDDGICIKSGKDEQGRKRGEPCQNVIVMNNTVLHGHGGFVVGSEMS 358
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GGV N+ ++ VG+ K+N GRGG + NI +S++ M N
Sbjct: 359 GGVNNIYVDNCTFMGTDVGLRFKSNRGRGGLVENIYISNINMIN 402
>gi|445494990|ref|ZP_21462034.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791151|gb|ELX12698.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 615
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 11/171 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP +I+ + ++++ ++PFW HPV+C N+VIR V + PN+DG DP+
Sbjct: 303 YLRPPMIQLIGCTNVLLQGYHVTHTPFWQHHPVHCRNIVIRNVH--CESLGPNSDGFDPE 360
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ +V I+ TGDD +A+K+G D YG PS I I+ T S + +GSE +
Sbjct: 361 ACDHVLIDGCTFDTGDDCIAIKAGKD-LDTQYG-PSQNIVIQNCTMQSGHGAVTLGSEMA 418
Query: 129 GGVENVLAEHINLYNV-------GVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GG++NV A+++ N+ I +KTN+ RGG++RN V D+ + N
Sbjct: 419 GGIQNVYAQNLVFQNINWATNPLNTAIRLKTNLNRGGYLRNFYVRDISIPN 469
>gi|373954236|ref|ZP_09614196.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373890836|gb|EHQ26733.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 545
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN++ + I++S FQNSP W +H + C ++ ++ V + P ++ N D ID +
Sbjct: 221 YFRPNMVVLTGCKKILLSGTTFQNSPNWCLHTLLCEDLTLQDVHVRNPWNAQNGDAIDVE 280
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV +E+S GDD + +KSG DE G G P+ + +R G +GSE S
Sbjct: 281 SCRNVLVENSTFDAGDDGLCIKSGRDEEGRKRGVPTENVVMRNNIVYRAHGGFVIGSEMS 340
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GG N+ +G+ KT GRGG + NI + ++ M +
Sbjct: 341 GGARNIFVSDCTFIGTDIGLRFKTARGRGGIVENIYIKNISMRD 384
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++ R++ + +N+P W +HP C + +TI AP +SPNTDG +P+S
Sbjct: 233 RPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSPNTDGFNPESC 292
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETS 128
NV I S GDD +AVK+G H + G+++R G+ +GSE S
Sbjct: 293 RNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMERGHGGLVIGSEMS 352
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG----DVG 184
GGV +V E ++ G+ +KT GRGG + NIT+ V ++ + D
Sbjct: 353 GGVHDVTVEDCDMVGTDRGLRLKTRRGRGGSVSNITMRRVLLDGVHTALSANAHYHCDAD 412
Query: 185 DHP------DDKFNPNALPVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINL 236
H D + P ++GIT++DV + +G+ GL +P I + N+ +
Sbjct: 413 GHDGWVQSRDPAPVDDGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIRNIAIRNLTI 471
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++ R++ + +N+P W +HP C + +TI AP +SPNTDG +P+S
Sbjct: 225 RPRGLHLVSCRNVGLFGFTIRNAPSWTVHPQGCETLKAAGLTISAPHNSPNTDGFNPESC 284
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETS 128
NV I S GDD +AVK+G H + G+++R G+ +GSE S
Sbjct: 285 RNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRHCLMERGHGGLVIGSEMS 344
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI------KIAGD 182
GGV NV E ++ G+ +KT GRGG + N+T+ V ++ + + D
Sbjct: 345 GGVHNVTVEDCDMVGTDRGLRLKTRRGRGGSVSNVTMRRVLLDGVQTALSANAHYHCDAD 404
Query: 183 VGDHPDDKFNPNAL----PVVNGITIKDVWGTKV-QQSGLIQGLKNSPFTGICLSNINL 236
D +P + P ++GIT++DV + +G+ GL +P I + N+ +
Sbjct: 405 GHDGWVQSRDPAPVDYGTPFIDGITVEDVEIRHLAHAAGVFLGLPEAPIRNIAIRNLTI 463
>gi|430005219|emb|CCF21020.1| Polygalacturonase-like protein [Rhizobium sp.]
Length = 521
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 21/267 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
R + ++ + + +N+P W IHP C +V ++I AP DSPNTDG +P+ S
Sbjct: 228 RARGLHLIDCSDVTLFGFTIRNAPSWIIHPQGCHRLVAACLSIEAPHDSPNTDGFNPEGS 287
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYG----IAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
S + +E + GDD +A+K+G + G A+ + + IR G+ +GSE
Sbjct: 288 SEIRVEGVRFTVGDDCIAIKAG--KRGPCGEAAHLRETRDVQIRHCLMERGHGGVVIGSE 345
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
SGGV +VL E + G+ +KT GRGG + IT+ V ME
Sbjct: 346 MSGGVHDVLVEDCEMIGTDRGLRLKTRRGRGGSVSGITMRRVRMEGVLTAFSANAHYHCD 405
Query: 187 PD--DKF----NPNAL----PVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLSNIN 235
PD D++ P AL P ++GI ++D+ +V + G GL +P + + N+
Sbjct: 406 PDGHDEWVQSRQPAALDEGTPEIDGIAVEDIDLHEVGHAVGAFLGLPEAPIRNVSIRNLR 465
Query: 236 LQGV---AGPTSPPLKCSDVSGSAYQV 259
+ A P +PP+ V +++
Sbjct: 466 VHSFDPEAAP-APPIMADGVQAMRHEM 491
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L++ R ++ F+NSP WN+HP C +V IR V+I S N DG+D DS
Sbjct: 205 RPTLVQLDRCRKVLFDGPTFRNSPAWNVHPWLCEHVTIRNVSIRNQWHSQNGDGLDLDSC 264
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
I DS GDD + +KSG D G A P+ +TIR G +GSE SG
Sbjct: 265 RYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQVFHGHGGFVIGSEMSGD 324
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V N+ G+ K+ GRGG + I + V M+ K I ++
Sbjct: 325 VRNIAITDCVFIGTDAGLRFKSTRGRGGTVERIYIRGVLMKEIAKEAIIFSSYYSGKNNT 384
Query: 191 FNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPT 243
+P A+ PV I D + I+GL P I + L G T
Sbjct: 385 DDPVAVTEETPVFRDFHISDTTCIGAHTALHIKGLPEMPIENIVFDRVQLTARNGAT 441
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 14/241 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+ + +I+I ++ NSPFW ++PV C N+ + + I + N DG+DP+S
Sbjct: 238 RPPFIQPYKTNNILIRDITILNSPFWEVNPVLCENIKVSGIRI--DTNLYNNDGVDPESC 295
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++ IE+ Y TGDD +A+KSG + G G P+S I IR GI +GSE SGG
Sbjct: 296 KDMIIENCYFLTGDDCIAIKSGRNNEGRNIGIPTSNIIIRNNEFKDGHGGITIGSEISGG 355
Query: 131 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
V N+ H N ++ + I KTN RGG + NI + + + ++ + I D
Sbjct: 356 VNNIFG-HDNYFDSEELDYPIRFKTNAERGGLLENIYIKNSTVNKSKVAV-IHADF--FY 411
Query: 188 DDKFNPNALPVVNGIT---IKDVWGTKV--QQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
++ N N P++ I IK V G + + + ++G +++P I + + L GV G
Sbjct: 412 EEGTNGNHKPILRNIALSNIKTVDGGSIDAKNALYLKGFEDAPIENILIEDALLNGVKGE 471
Query: 243 T 243
Sbjct: 472 A 472
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 22/283 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++ R + +N+ W IHP C +++ ++I AP DSPNTDG +P+S
Sbjct: 226 RPRGLHLVSCRKTNLLGFTIRNAASWTIHPQGCEDLIAAGLSIAAPHDSPNTDGFNPESC 285
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETS 128
NV I S GDD +AVK+G H + G+ + G+ +GSE S
Sbjct: 286 RNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGVRVGHCLMERGHGGLVIGSEMS 345
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG----DVG 184
GGV +V E ++ G+ +KT GRGG + NI + V ++ + + D
Sbjct: 346 GGVHDVAVEDCDMIGTDRGLRLKTRRGRGGAVSNIAMRRVLLDGVKTALSANAHYHCDAD 405
Query: 185 DHPD--DKFNP----NALPVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINL- 236
H D NP + P ++GIT++DV + +G GL +P + + N+ +
Sbjct: 406 GHDDWVQSRNPAPVDSGTPFIDGITVEDVEIRNLSHAAGAFLGLAEAPIRNVTIRNVTIV 465
Query: 237 -QGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGACSN 278
+ ++ +PP+ A +V+P + Q C N
Sbjct: 466 SRDLSAIATPPIM-------ADRVRPMRHEAIVFEQAHIVCDN 501
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 232 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDL 291
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I ++ GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 292 ESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFVVGSEM 351
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 352 SGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
PNL+ + + I N++ NSP + + P YC+ V + + I PA+SP T+G+ DS+S
Sbjct: 336 PNLVHLVGCSDVKIENIVLTNSPHFTVRPQYCNKVSVSRIHISNPANSPGTNGVVFDSTS 395
Query: 72 NVCIEDSYISTGD--DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
N + DS+I+TGD D VA+KSG D +G PS I + VT + ++VGSE SG
Sbjct: 396 NSFLRDSFITTGDKEDAVAIKSGKDYHGRKANVPSKNIRVEHVTILGGHA-LSVGSEMSG 454
Query: 130 GVENVLAEHINL----YNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVG 184
GV N++ I GVG VKT GRGG + IT ++ NA +++ +
Sbjct: 455 GVSNIIFSDITFDGRNNKFGVGSARVKTMRGRGGVVDQITFQNIRGWNALYALELY-EYY 513
Query: 185 DHPDDKFNP---NALPVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINLQGV 239
D P P+V I K+V +++ +G+I GL + + + N++L V
Sbjct: 514 SKQDTNVGPVSREETPIVKNINFKNVHIEGIKRYAGVIAGLPEMAVSNLVIENVHLTNV 572
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 20/260 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN++ ++III V FQNSP W +HP+ C ++ ++ V + P + N+D ID +
Sbjct: 457 FLRPNMLSLTRCKNIIIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNPWYAQNSDAIDLE 516
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N +E STGDD + +KSG DE G G P+ I+ G +GSE S
Sbjct: 517 SCRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCIVYHAHGGFVIGSEMS 576
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GGV N+ VG+ KT GRGG + NI V+++ M + A+
Sbjct: 577 GGVRNMFISDCTFMGSDVGLRFKTARGRGGVVNNIYVNNINMTDIPGEAVLFDMYYAAKD 636
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
++ G + P K P P I+++ + + LI+GL + + N
Sbjct: 637 PVRADGKENELPVIKAEPLGEGTPQFKDFYIQNIVCKGAETAILIRGLPE-----MTIKN 691
Query: 234 INLQGVAGPTSPPLKCSDVS 253
IN++ + L C +
Sbjct: 692 INIENAMIEANKGLVCVEAE 711
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 18/235 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F S +I++ V NSPFW IH N+ +R + + A N DG+DP+ S
Sbjct: 217 RPQFIQFNRSENILLEGVSVVNSPFWTIHLYLSKNIRLRNLNVYAHGH--NNDGVDPEMS 274
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE+ GDD +A+KSG + G PS I IR T + +A+GSE SGG
Sbjct: 275 QNVLIENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCTVKNGHQLVAIGSELSGG 334
Query: 131 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
+ENV +H + + + + +KTN GG+++NI Y N R G G +G
Sbjct: 335 IENVFIDHCTVLDGAKLNHLLFIKTNERMGGYVKNI-----YASNIRSGKIDLGILGIET 389
Query: 188 DDKFN--------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
D + L + I + ++ ++V+ + G K P + L N+
Sbjct: 390 DVLYQWRDLVPTYEKRLTPIKDIFLTNIHASEVKFIARVLGQKALPVETVSLKNV 444
>gi|427404324|ref|ZP_18895064.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
gi|425717175|gb|EKU80141.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
Length = 619
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 96/170 (56%), Gaps = 13/170 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP +IE + +++ +PFW HPV C +++IR V + + PN+DG DP+
Sbjct: 308 FLRPCMIELIGCSKVLLQGYQVNAAPFWLHHPVDCRDLLIRRVNM--ESLGPNSDGFDPE 365
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIRRVTGSSPFSGIAVGSET 127
S V ++D + GDD +A+K+G + + GH P+ + IR +S G+ +GSE
Sbjct: 366 SCDGVLVDDCLFNNGDDCIAIKAGKN---LDTGHGPTRNVVIRNCVMNSGHGGVTLGSEM 422
Query: 128 SGGVENVLAEHINLYNV-------GVGIHVKTNIGRGGFIRNITVSDVYM 170
+GG+E+V AE + N+ I +KTN+ RGGF+R++ V DV +
Sbjct: 423 AGGIEHVYAEKLEFRNIHWKDDPLNTAIRLKTNMNRGGFLRHLYVRDVTL 472
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 250 PWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDL 309
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I ++ GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 310 ESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFVVGSEM 369
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 370 SGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 412
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 13/252 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + R + I+ + +NSP W +HPV C +V+ +TI DSPNTDG++P+SS
Sbjct: 220 RPRTMFLSGCRHLTIAGITVRNSPSWTVHPVLCEDVLAVGLTIRNHPDSPNTDGLNPESS 279
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ + IS GDD VA+K+G + P+ + IR + +GSE S G
Sbjct: 280 QNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEIRNCLMQRGHGAVVMGSEMSQG 339
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG----DVGDH 186
+ +V + + G+ +KT GRGG + I+V D ME+ I + D
Sbjct: 340 ISDVSISRCHFFGTDRGLRIKTRRGRGGTVSKISVHDCRMEDVATPIAVNAFYFCDADGR 399
Query: 187 PDDKFNPNALPV------VNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL--Q 237
D + ALPV + GI I+++ + + + + GL S + + +++
Sbjct: 400 SDYVQSRTALPVSLTTPKIEGIDIRNLEVSGAETAAAVFYGLPESTIDAVSIDGMSIAYS 459
Query: 238 GVAGPTSPPLKC 249
A P P + C
Sbjct: 460 ADAKPAVPEMAC 471
>gi|16507076|gb|AAL24033.1|AF417111_1 PehC [Ralstonia solanacearum K60-1]
Length = 679
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 100/180 (55%), Gaps = 14/180 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++EF+ ++++ +PFW HP C+NVVIR VT+ + PN DG DPD
Sbjct: 347 YLRPCMVEFIGCTNVLMETYRTHATPFWQHHPTDCTNVVIRGVTV--DSIGPNNDGFDPD 404
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+ NV E +TGDD +A+KSG AYG P+ I+ +S GI +GSE
Sbjct: 405 ACDNVLCEGMTFNTGDDCIAIKSG-KNLDTAYG-PAQNHVIQDCIMNSGHGGITLGSEIG 462
Query: 129 GGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
GGV+ + A ++ + N + + I +KTN+ RGG++R+ V +V + N G+ + G
Sbjct: 463 GGVQQIYARNLTMRNAFYATNPLNIAIRIKTNMNRGGYVRDFHVDNVTLPN---GVSLTG 519
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 37/256 (14%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--NTDGID 66
+ RP +++F R++++S + + P W +HPV +NV +R +T+ DS NTDG D
Sbjct: 215 YLRPKMVQFYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITV----DSTLYNTDGCD 270
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+ S+V I +T DD VAVKSG DE G G PS I +R S + G+ VGSE
Sbjct: 271 PECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCRFSGRWGGMTVGSE 330
Query: 127 TSGGVENVLAEHINL--------YNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENA 173
SGGV ++ AE+ + Y V ++VK + RGG IRN T +V E
Sbjct: 331 MSGGVRDIFAENCEINSPDFPGRYPVKHALYVKASKKRGGCIDGVHIRNFTGQNVEREAV 390
Query: 174 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKNSPFTG 228
+ G G LPV +++++ +++ G + GL+ G
Sbjct: 391 FVNMNYNGGEG---------GTLPV----SVRNIHMDRMEIDGARAVLQLVGLETDHLRG 437
Query: 229 ICLSNINLQGVAGPTS 244
+ LS G+ P S
Sbjct: 438 VSLSRSTFTGILNPDS 453
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP +I R + + + +NSP WNIHP + ++ + +L+P DSPNTDG+DP+S
Sbjct: 223 RPRMIFLERCRQVTVQGITVRNSPSWNIHPYFSDHLRFFDLKVLSPKDSPNTDGLDPESC 282
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I S GDD +AVKSG G Y PS I+IRR + +GSE +GG
Sbjct: 283 KDVEIAGVCFSVGDDCIAVKSGKIYMGSTYKCPSKNISIRRCCMRDGHGSVTIGSEMAGG 342
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
V+++ + + G+ +KT GRG ++ V + E+ R
Sbjct: 343 VKDLTVKDCMFLHTDRGLRIKTRRGRG---KDAVVDKIVFEHIR 383
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 124/239 (51%), Gaps = 11/239 (4%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P RP L+EF+N + + + + W+IHP C N+V R +TI + N DGID
Sbjct: 171 PLRRPALLEFINCDGVHLEGISTSYAHMWSIHPTCCDNLVFRNLTI--RSTKTNGDGIDI 228
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSGIAVGSE 126
DS +V I+ I++GDD +++KSG E P+ + I T F+ + +G+E
Sbjct: 229 DSCRHVLIDSCDIASGDDCISLKSGRGEEAYTMNRPTEDVRITNCTLEGRGFACLGIGTE 288
Query: 127 TSGGVENVLAEHINLYNV-GVGIHVKTNIGRGGFIRNITVSDVYMENARKG-IKIAGDVG 184
+S G+ NV+ EH ++ +V I++K+ IGRG FI N+TV D+ R G ++I
Sbjct: 289 SSAGIRNVIIEHCHITSVYKYAIYIKSRIGRGAFIENLTVRDMDAARMRMGFLRIDQTNA 348
Query: 185 DHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D P LP+ +++ +VQ + ++ N+ +G L + LQG++G
Sbjct: 349 GIQDADPVPGLEGLPLFRNFRFENI---RVQDAPVLVEAINTD-SGKMLDGLVLQGISG 403
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ R+I + + F +SP W IHP + ++ + + PA SPNTDG+DP+S
Sbjct: 222 RPRMLSLNRCRNIRVQGLYFHDSPAWVIHPYFSDELLFCNLIVENPAKSPNTDGLDPESC 281
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I S GDD +AVKSG G Y PSS I + + + VGSE +GG
Sbjct: 282 RDVTICGVRFSLGDDCIAVKSGKIYMGRRYKTPSSNIHVYQCLMEHGHGAVTVGSEMAGG 341
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMEN 172
V N++ E Y+ G+ +KT GRG + NI D+ ME
Sbjct: 342 VNNLIVEKCRFYHTDRGLRIKTRRGRGKDAILDNIIFRDLMMEQ 385
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 20/243 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP LI+F I +S+ +NSPFW +H VY + + I +T PA++ NTD +D D
Sbjct: 156 FLRPPLIQFWKCHDIKLSDFTLENSPFWTLHMVYSNKISIDNMTFSNPAEAINTDAMDID 215
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS +V +++ + GDD V +KSG E GI P+ + + + GIA+GSET+
Sbjct: 216 SSEDVTVKNCLLDVGDDGVTLKSGSGEDGIRVNKPTKNVKVSDCRILASHGGIAIGSETA 275
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG------- 181
G+ +V + GI +K+ RGG I NI +S + M+ I +
Sbjct: 276 AGISDVEVSNCTFDGTRRGIRLKSRRTRGGTIENINLSGLKMDLCWCPISLEQYFAPGVL 335
Query: 182 --------DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS-GLIQGLKNSPFTGICLS 232
D G P D+ P+ + I+IK++ T V+ + I GL + + +
Sbjct: 336 PEEEATVLDEGPQPVDETTPH----IRNISIKNIKATNVRATAAFIVGLPEANIENVEIE 391
Query: 233 NIN 235
N +
Sbjct: 392 NFD 394
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 115/255 (45%), Gaps = 17/255 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
++ F RP ++ + +++ FQNSP WNIHP+ C +V IR +T+ P S N D
Sbjct: 233 EKIKDFLRPVMVSIKECKRVLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNGD 292
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S NV I ++ GDD + KSG DE G P+ + ++ G +
Sbjct: 293 GLDLESCKNVVIYNNSFDVGDDAICFKSGKDEDGRKRAVPTENVVVKNNVVYHGHGGFVI 352
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGIK 178
GSE SGGV NV + VG+ K+ GRGG + NI +S++ M E R +
Sbjct: 353 GSEMSGGVRNVHVSNCTFIGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLF 412
Query: 179 IAG------DVGDH-PDDKFNPNA-----LPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
G D G+ PD + N A P I +K++ + GL
Sbjct: 413 YGGKSPVLDDGGNSVPDIQENEPAPVTEETPAFRNIFMKNIRANGFGNAAFFMGLPEMNL 472
Query: 227 TGICLSNINLQGVAG 241
+ L N L+ G
Sbjct: 473 QNVHLENALLRAAKG 487
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+ L + RP LI F + + I + ++ +SP W ++P+ C N+ I + I PADSPNTD
Sbjct: 123 REQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTD 182
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GIDP+S NV I + +I GDD +A+KSG ++ ITI + +
Sbjct: 183 GIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGAVVL 240
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GSE SG + NV + + GI +K+ GRGG I +I V+++ M+N
Sbjct: 241 GSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDN 289
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P I +N + + I + N+PFWN+ PVYC NV+IR +T+ + P DGID +SS
Sbjct: 221 PMFISPINCKKVYIEGITLHNTPFWNVVPVYCDNVIIRGITVQS-VGIPRGDGIDIESSR 279
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
NV IE +S+GDD +K+G E GI P+ + IR GI GSET+G +
Sbjct: 280 NVLIEYCTLSSGDDCFTIKAGRGEDGIRVNKPTENVVIRHCLAREGHGGITCGSETAGMI 339
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI--------AGDV 183
NV + G+ KT R G NI ++ M +K G++
Sbjct: 340 RNVYVRDCVFDDTDTGLRFKTRRSRAGGGENIVYENIRMNLRGDAVKFDMLGSRQYVGEL 399
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
D + + P IT +++ K + I G+ SP + + N
Sbjct: 400 ADRLPPRPVNDLTPAYRNITARNIVVDKARTFIDITGIPESPAANLLIEN 449
>gi|299144965|ref|ZP_07038033.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|336412843|ref|ZP_08593196.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
gi|298515456|gb|EFI39337.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|335942889|gb|EGN04731.1| hypothetical protein HMPREF1017_00304 [Bacteroides ovatus
3_8_47FAA]
Length = 527
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N ++++ + + S FWNI P+YC NV+IR +T+ + P+ DGID +
Sbjct: 206 FYRPKTISPINCTNVLVEGITMERSAFWNICPIYCENVIIRGITVNSIG-VPSGDGIDIE 264
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE S ++ GDD +K+G E G+ G + + IR GI GSET+
Sbjct: 265 SCKNVLIEYSTLNCGDDCFTLKAGRAEDGLRVGKATENVVIRYSLAKDGHGGITCGSETA 324
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--------IA 180
GG+EN+ VGI KT R G + +I ++ M N + K
Sbjct: 325 GGIENIYLHDCVFDGTQVGIRFKTRRNRAGGVSDILYENIRMTNVGEAFKWDLLGSKRYM 384
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
G++ + PV+ I I++ + I G+ P + I + N
Sbjct: 385 GELASRIPPRAVNRLTPVIKDIKIRNFIVESAHKVLSINGIPEVPCSNILIEN 437
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 232 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNGDALDL 291
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I ++ GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 292 ESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKDNTVLHGHGGFVVGSEM 351
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 352 SGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|256424483|ref|YP_003125136.1| G-D-S-L family lipolytic protein [Chitinophaga pinensis DSM 2588]
gi|256039391|gb|ACU62935.1| lipolytic protein G-D-S-L family [Chitinophaga pinensis DSM 2588]
Length = 727
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN++ + + +++ V FQNSP W +HP+ ++ +R V P + N DGID +
Sbjct: 445 FLRPNMLSITSCKYVLLEGVTFQNSPAWCLHPLLTEHITLRDVYAKNPWYAQNGDGIDLE 504
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S IE GDD + +KSG DE G G + + + T G VGSE S
Sbjct: 505 SCRYARIEGCTFDVGDDGICIKSGRDEQGRKRGVATEDVIVNNCTVYHAHGGFVVGSEMS 564
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-------------ARK 175
GG N+ + + +G+ KT GRGG + I V+++ M++ A+
Sbjct: 565 GGARNLFVSNCSFLGTDIGLRFKTTRGRGGIVEKIYVNNINMKDIPAEAILLDMYYMAKD 624
Query: 176 GIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ ++G+ + + P +A P I +V +++ I+GL P + I L +
Sbjct: 625 PVPLSGEKREAVKVELFPVTDATPQFKDFHISNVVCHGAEKAIFIRGLPEMPISDIHLKD 684
Query: 234 INLQG 238
I ++
Sbjct: 685 ITIKA 689
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 17/237 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP++I+ ++ +++++ +NSPFW H VY + V+R +T+ + +PN DG+D DSS
Sbjct: 208 RPSMIQIFDAERVLLADYTVRNSPFWINHLVYTDDAVVRGLTV--DSHNPNNDGVDVDSS 265
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V IE + TGDD V VKSG D+ G G PS + +R GIA+GSE SGG
Sbjct: 266 TDVLIEHNTFRTGDDSVVVKSGRDKDGRDIGRPSRNVVVRHNDMGGE-DGIALGSEMSGG 324
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV-----GD 185
+ +V L + I K N+ RGG + +I V + +++ + I D GD
Sbjct: 325 ISHVYFTDNTLRSGAAAIRFKGNLDRGGTVEHIRVRNFDIDSFERLIWFQLDYPGELGGD 384
Query: 186 HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
P PV I D T I G +P + L NI + P
Sbjct: 385 FP---------PVYRDIVFSDFTVTSADTLLEIHGPDAAPLRDVTLRNITVAHTDTP 432
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 121/277 (43%), Gaps = 24/277 (8%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 234 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDL 293
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I ++ GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 294 ESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 353
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGG-----FIRNITVSDVYMENARKGIKIAGD 182
SGGV+NV VG+ K+ GRGG +I NI + D+ E + G
Sbjct: 354 SGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINMIDIPHEALLFDLFYGGK 413
Query: 183 -VGDHPDDKFN----------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 231
G+ +D P I I +V V ++ GL P + +
Sbjct: 414 GAGEETEDDLEGRMKSSVPPVTEKTPAFRDIHITNVTCRSVGRAMFFNGLPEMPIRNVHV 473
Query: 232 SNINL----QGVAGPTSPPLKCS----DVSGSAYQVK 260
++ + QG+ + + D G+A QVK
Sbjct: 474 KDVVITDAKQGIVISQAENVSIENVKIDTKGTALQVK 510
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 59/66 (89%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
MW++RTLPFTRP+L+E M S +++SN++FQ+SPFWNIHPVYCSNVVI +T+LAP DSP
Sbjct: 170 MWKKRTLPFTRPHLLELMYSTDVVVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPHDSP 229
Query: 61 NTDGID 66
NTDGID
Sbjct: 230 NTDGID 235
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 37/256 (14%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--NTDGID 66
+ RP +++F R++++S + + P W +HPV +NV +R +T+ DS NTDG D
Sbjct: 171 YLRPKMVQFYRCRNVLVSGLTIVDPPMWTVHPVLSTNVTVRDITV----DSTLYNTDGCD 226
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
P+ S+V I +T DD VAVKSG DE G G PS I +R S + G+ VGSE
Sbjct: 227 PECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCWFSGRWGGMTVGSE 286
Query: 127 TSGGVENVLAEHINL--------YNVGVGIHVKTNIGRGGF-----IRNITVSDVYMENA 173
SGGV +V AE+ + Y V ++VK + RGG+ IRN T V +
Sbjct: 287 MSGGVRDVFAENCEINSPDFPGRYPVKHALYVKASKKRGGYIDGVHIRNFTGQSVERDAV 346
Query: 174 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-----IQGLKNSPFTG 228
+ G G LPV +++++ +++ G + GL+ G
Sbjct: 347 FVNMNYNGGEG---------GTLPV----SVRNIHMDRMEIDGARAVLQLVGLETDHLRG 393
Query: 229 ICLSNINLQGVAGPTS 244
+ LS G+ P S
Sbjct: 394 VSLSRSTFTGILSPDS 409
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
+ R + F RP +I + +++ + QNSP WNIHP + +++ +T+L P DSPNT
Sbjct: 236 KVRRIAF-RPRMIFLNHCEHVVVQGIRVQNSPSWNIHPYFSNHLRFLDLTVLNPKDSPNT 294
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DG+DP+S +V I Y S GDD +A+KSG G Y PS I IR+ I
Sbjct: 295 DGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYRVPSEDIVIRQCCMRDGHGSIT 354
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG 157
+GSE +GGV+++ + + G+ +KT GRG
Sbjct: 355 IGSEMAGGVKHLTVKDCLFLHTDRGLRIKTRRGRG 389
>gi|295095844|emb|CBK84934.1| Endopolygalacturonase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 430
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I S+SI++ + + S FWN+H Y + + V I A P+TDGID DS
Sbjct: 147 RPRNILVFESQSILLRDFTSRESGFWNMHLCYSRRITVEGVQISNSA-GPSTDGIDIDSC 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V +E +S DD + +KSG + I IR T + SGI +GSETSGG
Sbjct: 206 EQVRVERCIVSCNDDNICIKSGRGREAAQKARTARDIVIRGCT-LNKGSGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA---------- 180
+E VL E GVG +K+ RGGFIR+ITV ++++ + R + I
Sbjct: 265 IERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLHLTDVRFPVLIQLNWFPQYSYG 324
Query: 181 --GDVGDHPDDKFN-------PNALPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPF 226
G++ D P+ L V+G+TIK++ + ++ I+G P
Sbjct: 325 DRGNLSDKPEHWRKLAEGVEGEAGLTAVSGLTIKNMSAHRSDNKYFSRAFFIEGYPERPV 384
Query: 227 TGICLSNI 234
TG+ L I
Sbjct: 385 TGLTLDGI 392
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 86/163 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 232 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDL 291
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I ++ GDD + +KSG D+ G G P + ++ T G VGSE
Sbjct: 292 ESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGGFVVGSEM 351
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 352 SGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 8/235 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I ++I++ SPFW IHP+ N+ +R V + + N DG DP+S
Sbjct: 208 RPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKVKM--QSHGYNNDGCDPESC 265
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IED TGDD +A+KSG DE G + PS I +R +G+A+GSE +GG
Sbjct: 266 RNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCRMKDGHAGVAIGSEVTGG 325
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
NV E+ + + + I +K+N RGG + NI + ++ + ++ I H D
Sbjct: 326 CRNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVD 385
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGP 242
D P LP + I ++++ K Q + G ++ I + + GV P
Sbjct: 386 D--GP-YLPYFHNIHLENITSKKSQYVLHLDGFEDKIQAQDIFVKDCTFDGVMKP 437
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 8/235 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I ++I++ SPFW IHP+ N+ +R V + + N DG DP+S
Sbjct: 208 RPQFINLYKCKNILLEGFTLNRSPFWLIHPLLSENITVRKVKM--QSHGYNNDGCDPESC 265
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IED TGDD +A+KSG DE G + PS I +R +G+A+GSE +GG
Sbjct: 266 RNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCRMKDGHAGVAIGSEVTGG 325
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
NV E+ + + + I +K+N RGG + NI + ++ + ++ I H D
Sbjct: 326 CRNVWVENCTMDSPELDRIIRIKSNAMRGGEVENIFIRNIRVGECKESILGFELKYWHVD 385
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGP 242
D P LP + I ++++ K Q + G ++ I + + GV P
Sbjct: 386 D--GP-YLPYFHNIHLENITSKKSQYVLHLDGFEDKIQARDIFVKDCTFDGVMKP 437
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 86/163 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 232 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQNGDALDL 291
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I ++ GDD + +KSG D+ G G P + ++ T G VGSE
Sbjct: 292 ESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKNNTVLHGHGGFVVGSEM 351
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
SGGV+N+ VG+ K+ GRGG + I + +++M
Sbjct: 352 SGGVKNIYVADCTFLGTDVGLRFKSTRGRGGVVEGIYIHNIHM 394
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+ L + RP LI F + + I + ++ +SP W ++P+ C N+ I + I PADSPNTD
Sbjct: 123 REQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIKNPADSPNTD 182
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GIDP+S NV I + +I GDD +A+KSG ++ ITI + +
Sbjct: 183 GIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGAVVL 240
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GSE SG + NV + + G+ +K+ GRGG I +I V+++ M+N
Sbjct: 241 GSEMSGDIRNVTISNCIFQDTDRGVRLKSRRGRGGTIEDIRVNNIVMDN 289
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 4/172 (2%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R + + F RP ++ + +++ V QNSP WN+HP + ++ +TIL P DSPNT
Sbjct: 214 RAKIIAF-RPRMVFLNHCDHVVLHGVTIQNSPSWNLHPYFSDDLRFLDLTILNPWDSPNT 272
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DG+DP+S + + I Y S GDD +A+KSG G Y PS I +R+ ++ +
Sbjct: 273 DGMDPESVNGLEIAGIYFSLGDDCIALKSGKYYMGHKYKVPSQNIEVRQCCMNNGHGAVT 332
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
+GSE + GV++V + + G+ +KT GRG ++ V D+ EN R
Sbjct: 333 IGSEMAAGVKHVHVKDCLFLHTDRGLRIKTRRGRG---KDAVVEDICFENIR 381
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 17/239 (7%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P P + +N +++ + + +N+PFWNI P+YC NV+IR +T+ + P+ DGID
Sbjct: 203 PVYLPMFVSAVNCKNVYLEGLQLENTPFWNIVPIYCDNVIIRGITVNS-VGIPSGDGIDI 261
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+SS NV IE ++ GDD +K+G E G+ G P+ + IR GI VGSET
Sbjct: 262 ESSKNVLIEYCTLNCGDDCFTLKAGRGEDGLRIGKPTENVVIRYSLARQGHGGITVGSET 321
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--------I 179
+ + N+ + + VG+ KT RGG N+ + M +
Sbjct: 322 AAMIRNLYVHDVVFDDTEVGLRFKTRRPRGGGGENLHYERIRMRLRLDAFRWDMLGARMY 381
Query: 180 AGDVGDH----PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
G + D P +K PV I KD+ + + G+ SP TG L N+
Sbjct: 382 VGALADRLPALPVNKLT----PVYRNIYAKDIVVDSARALVRVDGIPESPMTGFHLQNV 436
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 111/245 (45%), Gaps = 20/245 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ + +++ V F+NSP W +HP+ C ++ + +++ P S N D +D +
Sbjct: 236 WLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWYSQNGDALDIE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + V + +S GDD + +KSG DE G G P I IR G VGSE S
Sbjct: 296 SCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRDNVVLHGHGGFVVGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR--------------NITVSDVYMENAR 174
GGV+N+ ++ VG+ K+ GRGG + + D++
Sbjct: 356 GGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEALIFDLFYGGNA 415
Query: 175 KGIKIAGDVGDHPDDKFNP---NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 231
G GD P ++ P P I IK+V V ++ L GL P I L
Sbjct: 416 PG---EGDAPGAPKEEVVPPVTEETPAFRDIFIKNVTAKNVGRAVLFNGLPEMPIKNIFL 472
Query: 232 SNINL 236
N+ +
Sbjct: 473 ENVTI 477
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 20/245 (8%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ + +++ V F+NSP W +HP+ C ++ I +++ P S N D +D +
Sbjct: 236 WLRPVLLSFIKCKKVLLEGVTFKNSPSWCLHPLSCEDITINNISVSNPWYSQNGDALDLE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + I++S GDD + +KSG DE G G P + IR G VGSE S
Sbjct: 296 SCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRNNVVLHGHGGFVVGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNIT--------------VSDVYMENAR 174
GGV+N+ ++ VG+ K+ GRGG + NI + D++
Sbjct: 356 GGVKNIYVDNCTFLGTDVGLRFKSTRGRGGVVENIHINNINMINIPNEGLIFDLFYGGKA 415
Query: 175 KGIKIAGDVGDHPDDKFNP---NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 231
G GD ++P ++ P P I IK+V V ++ L GL P I +
Sbjct: 416 PG---EGDGYNNPTEQKIPAVTEETPAFRDIFIKNVTAKNVGRAILFNGLPEMPIKNIHI 472
Query: 232 SNINL 236
N+ +
Sbjct: 473 ENVTM 477
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 29/276 (10%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+R F P L+EF++ R++ + + + W+IHP YC N+ + VT+ + A D
Sbjct: 174 ERATQFRNPALLEFVSCRNVRVEDCFTSQNDMWSIHPTYCENITFKNVTVHSGA-----D 228
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIA 122
GID DS +V I+ T DD +++KSG E G P+ + I T F + I
Sbjct: 229 GIDVDSCKHVVIDGCDFDTHDDCISLKSGRGEEGYTILRPTEDVQISNCTFMDHFWACIG 288
Query: 123 VGSETSGGVENVLAEHINLYNVGV-GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
+GSETSGG+ NV H I++K+ GRG FI +I+++D+ + A++G
Sbjct: 289 IGSETSGGIRNVRVNHCKCLGARTFAIYIKSRPGRGAFIEDISMNDLEVSGAKQGFLRFN 348
Query: 182 DVGDHPDDKF---NPNALPVV-----NGITIKD----VWGTKVQQSGLIQGLKNSPFTGI 229
+ D+F +P + + I + D V G + S ++G + TG
Sbjct: 349 ILDSGKQDEFPVPGEEGIPTIRNFHFSNIRVTDMPVLVDGVGIHPSKPLEGFSLTNVTGT 408
Query: 230 CLSNINLQG----------VAGPTSPPLKCSDVSGS 255
C I+L V G T P L +V+G+
Sbjct: 409 CGKGISLANIKHAVVRDIKVTGFTGPLLSAHNVTGT 444
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 234 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDL 293
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I ++ GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 294 ESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 353
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
SGGV+NV VG+ K+ GRGG + I + ++ M
Sbjct: 354 SGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 109/250 (43%), Gaps = 17/250 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ + I++ FQNSP WNIHP+ +V IR +TI P S N DG+D +
Sbjct: 234 FLRPVMVSIKECKRILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWYSQNGDGLDLE 293
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I ++ GDD + KSG +E G G P+ + ++ G VGSE S
Sbjct: 294 SCKNVVIYNNTFDVGDDAICFKSGKNEDGRRRGIPTENVIVKNNIVYHGHGGFVVGSEMS 353
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM-----ENARKGIKIAG-- 181
G V NV VG+ K+ GRGG + NI +S++ M E R + G
Sbjct: 354 GDVRNVHVSDCTFMGTDVGLRFKSTRGRGGVVENIYISNIDMIDIPTEPIRFNLFYGGNA 413
Query: 182 ---DVGDHPDDKFNP-------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICL 231
D GD+ P P I +K++ + GL + L
Sbjct: 414 PVMDDGDNSAPSEEPAEAVSVTEETPSFRNIFMKNIRANGFGNAAFFMGLPEMNLQNVHL 473
Query: 232 SNINLQGVAG 241
N L+G G
Sbjct: 474 ENAVLRGAQG 483
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 7/234 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++ + S+ I++ V F+NSP W IHP+ C ++ + V + P S N D +D +
Sbjct: 236 WLRPVMLSIVKSKRILLEGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV + + + GDD + +KSG DE G G + I+ T G +GSE S
Sbjct: 296 SCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKNNTVLHGHGGFVIGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM---ENARKGIKIAGDVGD 185
GGV NV + VG+ K+ GRGG + NI + ++ M N + + V D
Sbjct: 356 GGVRNVYVSGCSFVGTDVGLRFKSTRGRGGVVENIFIDNINMIDIPNDALTMDLYYAVND 415
Query: 186 HPDDKFNPNA---LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
P+ P+ PV I I +V ++ GL P I + N+ +
Sbjct: 416 FPETPI-PDVNEETPVFRNIYISNVLCRGAGRAVYFNGLPEMPLKNIFIKNMTV 468
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 234 PWLRPVLLNIVKSKRVLLEGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWYSQNGDALDL 293
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I ++ GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 294 ESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNTVLHGHGGFVVGSEM 353
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
SGGV+NV VG+ K+ GRGG + I + ++ M
Sbjct: 354 SGGVKNVYVTDCTFLGTDVGLRFKSTRGRGGVVEGIYIHNINM 396
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 9/170 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN ++ ++I+I V SP W +HPV N+ +R V I + PN DG DP+
Sbjct: 602 FLRPNFVQPYRCKNILIEGVSIIRSPMWELHPVLSQNITVRNVKI--TSHGPNNDGFDPE 659
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S ++ +ED+ TGDD +A+KSG + G P+ + IRR G+ +GSE +
Sbjct: 660 SCRDILVEDTLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCVMKDGHGGVVLGSECT 719
Query: 129 GGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 176
GG+ N+ E ++ ++ G+ K N RGG + N V+M N + G
Sbjct: 720 GGIRNIFVEDCEMDSPDLDRGLRFKNNAVRGGVLEN-----VFMRNVKIG 764
>gi|445494993|ref|ZP_21462037.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791154|gb|ELX12701.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 624
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP++++F++ +++ N+PFW +PV C N+ ++ I A + PN+DG DP+
Sbjct: 315 YLRPHMVQFISCTNVLFEGYQTTNTPFWQHNPVNCHNMHVK--RIYANSMGPNSDGFDPE 372
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S +NV IED + +TGDD +A+ SG I +G P+ I I+ S + +GS S
Sbjct: 373 SCTNVLIEDCHFNTGDDCIAIDSGKGP-DIQFG-PAKNIVIQNCKMQSGHGALTLGSIMS 430
Query: 129 GGVENVLAEHINLYN-------VGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GG+EN+ A+++ N + + I +KTN+ RGG++RN+ V +V++ N
Sbjct: 431 GGIENIYAQNLVFENSYWKTDPLNIAIRLKTNMSRGGYLRNMHVRNVHIPN 481
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ + S+ I++ V F+NSP W +HP+ C ++ + V + P S N D +D +
Sbjct: 235 WLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALDVE 294
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I + + GDD + +KSG DE G G P I +R T G +GSE S
Sbjct: 295 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGGFVIGSEMS 354
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 355 GGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAAKS 414
Query: 189 DKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 415 APSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 469
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ + S+ I++ V F+NSP W +HP+ C ++ + V + P S N D +D +
Sbjct: 229 WLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQNGDALDVE 288
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I + + GDD + +KSG DE G G P I +R T G +GSE S
Sbjct: 289 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRNNTVLHGHGGFVIGSEMS 348
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 349 GGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAAKS 408
Query: 189 DKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 409 APSEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 463
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 5/235 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ + S+ I++ V F+NSP W +HP+ C ++++ V + P S N D +D +
Sbjct: 236 WLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I + + GDD + +KSG DE G G P + +R T G +GSE S
Sbjct: 296 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFVIGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG---DVGD 185
GGV+NV + VG+ K+ GRGG + NI ++++ M + IA V
Sbjct: 356 GGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAVKS 415
Query: 186 HPDDKFN--PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
P + P I I DV+ ++ + GL P I + N+ + G
Sbjct: 416 APGEPVPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 470
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+ L + RP LI F + + I + ++ +SP W ++P+ C ++ I + I PADSPNTD
Sbjct: 123 REQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTD 182
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GIDP+S NV I + +I GDD +A+KSG ++ ITI + +
Sbjct: 183 GIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGAVVL 240
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GSE SG + NV + + GI +K+ GRGG I +I V+++ M+N
Sbjct: 241 GSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDN 289
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+ L + RP LI F + + I + ++ +SP W ++P+ C ++ I + I PADSPNTD
Sbjct: 123 REQLAYPRPKLISFDSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIKNPADSPNTD 182
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GIDP+S NV I + +I GDD +A+KSG ++ ITI + +
Sbjct: 183 GIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCHMLHGHGAVVL 240
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GSE SG + NV + + GI +K+ GRGG I +I V+++ M+N
Sbjct: 241 GSEMSGDIRNVTISNCIFQDTDRGIRLKSRRGRGGTIEDIRVNNIVMDN 289
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + V ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWYSQNGDAIDL 295
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ S+ +++ V F+NSP W +HP+ C ++ + + ++ P S N D +D +
Sbjct: 226 WLRPVLLSFVKSKKVLLEGVTFKNSPSWCLHPLSCEDITVNNIQVINPWYSQNGDALDLE 285
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N I +S GDD + +KSG DE G G P + ++ T G VGSE S
Sbjct: 286 SCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEMS 345
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
GGV+N+ E VG+ K+ GRGG +
Sbjct: 346 GGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 378
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ S+ I++ V F+NSP W +HP+ C + + + ++ P S N D +D +
Sbjct: 236 WLRPVLLSFVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDALDLE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N I +S GDD + +KSG DE G G P + ++ T G VGSE S
Sbjct: 296 SCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
GGV+N+ E VG+ K+ GRGG +
Sbjct: 356 GGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 110/239 (46%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN + N ++I + + NSP W +HP Y N++ TI+ P +SPNTDG+DP+S
Sbjct: 222 RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESC 281
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I + IS GDD VA+KSG + + P+ I IR + +GSE + G
Sbjct: 282 ENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRNSIFRKGHGSVTIGSEVAAG 341
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENA----RKGIKIAGDVG 184
V +V E G+ +KT GRG + NI ++ M++ + D
Sbjct: 342 VYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFCDPD 401
Query: 185 DHPD-----DKFNPN-ALPVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINL 236
H D DK N P + I +D+ V+ + GL P I L NI L
Sbjct: 402 GHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENITL 460
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V + P S N D +D +
Sbjct: 229 WLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVE 288
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I + + GDD + +KSG DE G G P + +R T G +GSE S
Sbjct: 289 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFVIGSEMS 348
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 349 GGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAAKS 408
Query: 189 DKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 409 APGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 463
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L + R++ + + QNSP W +HP + ++ V I PA+S NTDG+DP+S
Sbjct: 225 RPRLFFINHCRNVTMHGITVQNSPSWTLHPYFSDHLKFIDVKIKNPANSHNTDGLDPESC 284
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V + +YIS GDD +A+KSG G + P+S + +R+ + VGSE + G
Sbjct: 285 TDVRVLGTYISVGDDCIAIKSGKIYMGRKHKIPTSDMEVRQCCMRDGHGAVTVGSEIAAG 344
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
V++V N G+ VKT GRG + +I+ ++ M+N + PD
Sbjct: 345 VKDVHIRDCIFMNTDRGLRVKTRRGRGRDSVLDDISFENITMDNVMTPFVVNSFYFCDPD 404
Query: 189 DKFN----PNALPV------VNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINL- 236
K ALPV + +T KD+ T +G I GL S + N+++
Sbjct: 405 GKTEYVATSKALPVDDRTPAIKRLTFKDIKATNCHVAGAYICGLPESKIERLTFENVDIS 464
Query: 237 ---QGVAGPTSPPLKCSD 251
+G + L C +
Sbjct: 465 YADDAKSGVAAMMLACKE 482
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 111/240 (46%), Gaps = 28/240 (11%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F ++++ NSPFW IHP C NVVI + + A N DG+DP+ S
Sbjct: 208 RPQFIQFNRCENVLMEGFTVTNSPFWTIHPYLCKNVVISRLKVYAHGH--NNDGVDPEMS 265
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I D GDD +A+KSG + G PS I IR +T + +A+GSE SGG
Sbjct: 266 QNVFITDCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNLTVKNGHQLVAIGSELSGG 325
Query: 131 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
+ENV + + + + +KTN GG+++NI Y N G G +G
Sbjct: 326 IENVDISQCQVVDGAKLNHLLFIKTNERMGGYVKNI-----YASNLTAGKIDLGVLGIET 380
Query: 188 D-------------DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
D K P + ++ I++KD V+ I G K P + + NI
Sbjct: 381 DVLYQWRTLVPTKIRKLTPISDIYLSNISVKD-----VKFESRILGQKELPVKNVSMKNI 435
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 4/169 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I ++I++ SPFW IHP+ N+ +R V + + N DG DP+S
Sbjct: 206 RPQFINLYKCKNILLEGFTLHRSPFWLIHPLLSENITVRKVIL--QSHGRNNDGCDPESC 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I+ TGDD +A+KSG DE G + PS I +R +G+A+GSE +GG
Sbjct: 264 KNVLIDSCSFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRNCLMKDGHAGVAIGSEITGG 323
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGI 177
+NV E+ + + + I +K+N RGG ++NI V D+ + ++ I
Sbjct: 324 CQNVWVENCRMDSPELDRIIRIKSNSERGGEVKNIFVRDITVGECKESI 372
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V + P S N D +D +
Sbjct: 235 WLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVE 294
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I + + GDD + +KSG DE G G P + +R T G +GSE S
Sbjct: 295 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFVIGSEMS 354
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 355 GGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAAKS 414
Query: 189 DKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 415 APGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 469
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V + P S N D +D +
Sbjct: 235 WLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVE 294
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I + + GDD + +KSG DE G G P + +R T G +GSE S
Sbjct: 295 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFVIGSEMS 354
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 355 GGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAAKS 414
Query: 189 DKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 415 APGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 469
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ + S+ +++ V F+NSP W +HP+ C ++++ V + P S N D +D +
Sbjct: 235 WLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQNGDALDVE 294
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I + + GDD + +KSG DE G G P + +R T G +GSE S
Sbjct: 295 SCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRNNTVLHGHGGFVIGSEMS 354
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV+NV + VG+ K+ GRGG + NI ++++ M + IA
Sbjct: 355 GGVKNVYVSECSFIGTDVGLRFKSARGRGGVVENIYINNINMIDIPNDALIADLYYAAKS 414
Query: 189 DKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
P P I I DV+ ++ + GL P I + N+ + G
Sbjct: 415 APGEPIPSVSEETPAFRNIYISDVFCRGAGRAAYLNGLPEMPIENISIKNMVVTG 469
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ S+ I++ V F+NSP W +HP+ C + + + ++ P S N D +D +
Sbjct: 233 WLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDALDLE 292
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N I +S GDD + +KSG DE G G P + ++ T G VGSE S
Sbjct: 293 SCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEMS 352
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
GGV+N+ E VG+ K+ GRGG +
Sbjct: 353 GGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 385
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ F+ S+ I++ V F+NSP W +HP+ C + + + ++ P S N D +D +
Sbjct: 236 WLRPVLLNFVKSKRILLEGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWYSQNGDALDLE 295
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N I +S GDD + +KSG DE G G P + ++ T G VGSE S
Sbjct: 296 SCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEMS 355
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
GGV+N+ E VG+ K+ GRGG +
Sbjct: 356 GGVKNIYVEDCTFLGTDVGLRFKSTRGRGGVVE 388
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 4/169 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I ++I++ +PFW IHP+ NV IR V + + N DG DP+S
Sbjct: 208 RPQFINLYKCKNILLEGFTINRAPFWLIHPLLSENVTIRKVKM--QSHGYNNDGCDPESC 265
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV IED TGDD +A+KSG DE G + PS I +R +G+A+GSE +GG
Sbjct: 266 NNVLIEDCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCRMKDGHAGVAIGSEVTGG 325
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGI 177
NV E+ + + + I +K+N RGG + N+ V ++++ ++ I
Sbjct: 326 CRNVWVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNIFVGECKESI 374
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +N + +++ V FQNSP WN++P+ C NV + + I P S N DG+D +S
Sbjct: 235 RPVMVSLVNCKKLLLDGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQNGDGLDLESC 294
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+ + GDD + +KSG D+ G G P+ I+ G +GSE SGG
Sbjct: 295 RIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCVVYHGHGGFVIGSEMSGG 354
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
V N+ +++ G+ K+ GRGG + NI + D+ M +
Sbjct: 355 VRNLFIKNLTFIGTDCGLRFKSTRGRGGLVENIWMEDIRMSD 396
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+R RP ++ + ++I + +NSP WNIHP + ++ + +L+P DSPNTD
Sbjct: 227 KRMKTAFRPRMVFLERCKHVVIQGLTLRNSPSWNIHPYFSEHLKFLDLRVLSPKDSPNTD 286
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+DP+S +V I S GDD +AVKSG G Y PS I + R + +
Sbjct: 287 GLDPESCRDVEITGICFSVGDDCIAVKSGKIYMGTTYKRPSEDIVVSRCCMRDGHGSVTI 346
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENAR 174
GSE +GGV+N+ + G+ +KT GRG + I ++M+ +
Sbjct: 347 GSEMAGGVKNLTVRDCVFRHTDRGLRIKTRRGRGKNAVVDGILFERIHMDQVK 399
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 110/239 (46%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN + N ++I + + NSP W +HP Y N++ TI+ P +SPNTDG+DP+S
Sbjct: 222 RPNTVFLHNCKNIAMQGLCIMNSPSWTVHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESC 281
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I + IS GDD VA+KSG + + P+ I IR + +GSE + G
Sbjct: 282 ENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRNSIFRKGHGSVTIGSEVAAG 341
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENA----RKGIKIAGDVG 184
V +V E G+ +KT GRG + NI ++ M++ + D
Sbjct: 342 VYDVSVEKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENIIMKDVCMPFTANMFYFCDPD 401
Query: 185 DHPD-----DKFNPN-ALPVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINL 236
H D DK N P + I +D+ V+ + GL P I L NI L
Sbjct: 402 GHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENITL 460
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 80/154 (51%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ S+ I++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 235 PWLRPVLLSIAKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 294
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 295 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 354
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 355 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 226 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 285
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 286 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 345
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 346 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 379
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 236 PWLRPVLLSIVKSKKVLLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 295
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 296 ESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 355
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 356 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 389
>gi|354723575|ref|ZP_09037790.1| glycoside hydrolase family protein [Enterobacter mori LMG 25706]
Length = 430
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 26/250 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + S++I++ + S FWN+H Y +V + ++I+ A P+TDGID DS
Sbjct: 147 RPRNVLVYESKNILLKDFTSCESGFWNVHLCYSRDVAVENLSIINSA-GPSTDGIDIDSC 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V IE +S DD + +K+G + I IR + SGI +GSETSGG
Sbjct: 206 EQVRIERCTVSCNDDNICIKAGRGREAAPKARTARAIVIRECVLNKG-SGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA---------G 181
+E+VL E+ GVG +K+ RGGFIR+ITV ++ ++N R + I G
Sbjct: 265 IEHVLIENNRFNGTGVGFRIKSARNRGGFIRHITVRNLLLQNVRFPVLIQLNWFPQYSYG 324
Query: 182 DVGDHPDDKFNPNAL---------------PVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
D G+ D + L P ++ IT + ++ I+G + P
Sbjct: 325 DSGNLQDKPEHWRKLADGVEGEAGLTEVSHPTLSNITARRSDSNLFSRAFFIEGYPDRPV 384
Query: 227 TGICLSNINL 236
G+ L NI++
Sbjct: 385 CGLTLDNISV 394
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 22/235 (9%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+L++F + ++I I +V N+PFW IH + N++ R I A N DGIDP+ +
Sbjct: 203 RPHLVQFFDCKNITIEDVFITNAPFWCIHLLKSENIICR--GIRYDAKLVNNDGIDPEYT 260
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ IE+ + GDD VA+K G D G PS I IR G+ +GSE S G
Sbjct: 261 RNLLIENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCKFKG-LHGVVLGSEMSSG 319
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD---- 185
+++V E+ GI +KTN RGGFIR D+Y+ N G+V D
Sbjct: 320 IQHVFVENCTYGGYCKRGIFIKTNPDRGGFIR-----DIYVNNCE-----FGEVEDLFYV 369
Query: 186 ---HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 236
+ + + + V+ I +KD+ KV + L+ QG + P + N+++
Sbjct: 370 TSMYAGEGMDNHHFTEVHDIYVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 424
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 22/235 (9%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+L++F + ++I I +V N+PFW IH + N++ R I A N DGIDP+ +
Sbjct: 181 RPHLVQFFDCKNITIEDVFITNAPFWCIHLLKSENIICR--GIRYDAKLVNNDGIDPEYT 238
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ IE+ + GDD VA+K G D G PS I IR G+ +GSE S G
Sbjct: 239 RNLLIENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCKFKG-LHGVVLGSEMSSG 297
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD---- 185
+++V E+ GI +KTN RGGFIR D+Y+ N G+V D
Sbjct: 298 IQHVFVENCTYGGYCKRGIFIKTNPDRGGFIR-----DIYVNNCE-----FGEVEDLFYV 347
Query: 186 ---HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 236
+ + + + V+ I +KD+ KV + L+ QG + P + N+++
Sbjct: 348 TSMYAGEGMDNHHFTEVHDIYVKDLKCKKVNVAALVLQGTEAKPIYNVTFDNVDV 402
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L N ++ + + QNSP W IHP + ++ V IL PA+S NTDG+DP+S
Sbjct: 221 RPRLFFINNCSNVTMHGITVQNSPSWTIHPYFSKHLKFIDVKILNPANSHNTDGLDPESC 280
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V + +YIS GDD +A+KSG P+ +T+R+ + VGSE + G
Sbjct: 281 QDVLVLGTYISVGDDCIAIKSGKIYMAQKEKTPTEDMTVRQCCMRDGHGAVTVGSEIAAG 340
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGF--IRNITVSDVYMENARKGIKIAGDVGDHPD 188
V++V N G+ VKT GRG + +I+ ++ M+N + PD
Sbjct: 341 VKDVHIRDCMFMNTDRGLRVKTRRGRGKLSVLDDISFENIDMDNVMTPFVVNSFYFCDPD 400
Query: 189 DKFN----------PNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINL 236
K + P + +T KD+ +G I GL S + NIN
Sbjct: 401 GKTEYVGSRKPLPVDDRTPSIKSLTFKDINAKNCHVAGAYIFGLPESKVEKLTFENINF 459
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP ++ + + I++ V F+NSP WNIHP +C N+ +R VT+ P + N DGID +
Sbjct: 199 FYRPVMVSLRHCKRILLDGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYAQNGDGIDVE 258
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S V I + TGDD + +KSG + P + I + G +GSE S
Sbjct: 259 SCKKVHIHNCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCLVNEGHGGFVIGSEMS 318
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGG 158
G++NVL E+ VG+ +K+ +GRGG
Sbjct: 319 RGIKNVLVENCTFLGTDVGVRIKSALGRGG 348
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 4/160 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + +++I F SPFW +HP+ NV++R V + + N DG DP+S
Sbjct: 207 RPQFVNTYKCENVLIEGPTFNRSPFWILHPLLSKNVIVRDVNL--DSHGRNNDGCDPESC 264
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV IE +TGDD +A+KSG DE G + PS I IR +G+ +GSE +GG
Sbjct: 265 ENVLIERCRFNTGDDCIAIKSGKDEDGRVWNIPSKNIIIRNCEMKDGHAGVGIGSEITGG 324
Query: 131 VENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDV 168
ENV E+ + N+ I +K+N RGG ++N+ V +V
Sbjct: 325 CENVWVENCKMDSPNLTRVIRIKSNPERGGEVKNLYVRNV 364
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L + ++S + + + QNSP W +HP++ ++ + I+ P DSPNTDG+DP+S
Sbjct: 221 RPRLFQIIHSHHVNVQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESC 280
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I + S GDD +A+KSG G S ITIR + + + +GSE +GG
Sbjct: 281 HRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGHGAVVIGSEMAGG 340
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENA 173
V+++L E G+ +KT GRG + ++T + ME
Sbjct: 341 VKHILVEQCLFNETDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKV 385
>gi|383315603|ref|YP_005376445.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
gi|379042707|gb|AFC84763.1| endopolygalacturonase [Frateuria aurantia DSM 6220]
Length = 441
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 116/252 (46%), Gaps = 36/252 (14%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
RP LIE S + I V N+P WN+ Y ++ IR V+IL PADSPNTDGID
Sbjct: 171 LPRPWLIEIHRSADVRIEGVHIINAPMWNLVTRYSHDIDIRGVSILNPADSPNTDGIDVV 230
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGW---------------DEYGIAYGHPSSGITIRRVT 113
+S +V I DS ISTGDD +A+KSG D + GH
Sbjct: 231 ASRHVRIRDSRISTGDDCIAIKSGLPGSRLPAEATVDVRIDHLWLGRGH----------- 279
Query: 114 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 173
G++VGSET G+ V + G+ +K+ RG I +I + M+
Sbjct: 280 ------GLSVGSETLFGIRGVDVRDVVFQGTDAGVRIKSGRDRGNRISDIHFRHLRMKGV 333
Query: 174 RKGIKIAGDVGDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 229
I + ++ A+ P ++ +++ DV + +GL+ GL SP GI
Sbjct: 334 GTAISVLAYYPKPAPEQDPAQAVTATTPWISDVSVTDVQAEGSRVAGLLIGLPESPLRGI 393
Query: 230 CLSNINLQGVAG 241
L +++LQ +G
Sbjct: 394 RLGHLSLQAGSG 405
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 19/242 (7%)
Query: 6 TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGI 65
T + RP I+ ++I+I V +NSPFW ++PV C +V + V + PN+DG
Sbjct: 212 TGAYLRPPFIQPYKCKNILIQGVTIKNSPFWLMNPVLCKSVTVDKVNF--SSHGPNSDGC 269
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
DP+S +V I++ TGDD +A+KSG + G G PS I I G+ +GS
Sbjct: 270 DPESCDHVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCHMKEGHGGVVIGS 329
Query: 126 ETSGGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI---- 179
E SGGV NV ++ + ++ I +KTN RGG I +I + +V + + + I
Sbjct: 330 EISGGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNVDVGTVKNAVVINFYY 389
Query: 180 -AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 237
GD G +F+ P V I I+++ V + G + +P I N +
Sbjct: 390 EEGDAG-----QFD----PTVRDIQIENLHCKNVLSKAFYLNGFERAPINDIHFKNCHFD 440
Query: 238 GV 239
V
Sbjct: 441 QV 442
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 112/235 (47%), Gaps = 18/235 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F S +I++ V NSPFW IHP NV I+ VT+ A N DG+DP+ S
Sbjct: 206 RPQFIQFNRSENILLQGVTITNSPFWVIHPYLSKNVSIKEVTVFAHGH--NNDGVDPEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ IE+ GDD +AVKSG ++ P+ I I+ + +A+GSE SGG
Sbjct: 264 QNIIIENCTFDQGDDAIAVKSGRNQDAWRLATPAKNIVIKNCKIINGHQLMAIGSELSGG 323
Query: 131 VENVLAEHINLYN---VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
+EN+ + + + + +KTN RGG VS++YM++ + G G +G
Sbjct: 324 IENIYMSNCQVEQGAKLNHLLFIKTNERRGGI-----VSNIYMDSIQAGEIAEGILGIDT 378
Query: 188 DDKFN--------PNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
D + L V+ + + D+ V I G + P + L+ +
Sbjct: 379 DVLYQWRNLVPTYQRELTVIKDVYLSDIHAENVAFISKISGQEQVPVKNVVLNRV 433
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L + ++S + + + QNSP W +HP++ ++ + I+ P DSPNTDG+DP+S
Sbjct: 110 RPRLFQIIHSHHVNVQGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPESC 169
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I + S GDD +A+KSG G S ITIR + + + +GSE +GG
Sbjct: 170 HRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGHGAVVIGSEMAGG 229
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENA 173
V+++L E G+ +KT GRG + ++T + ME
Sbjct: 230 VKHILVEQCLFNETDRGLRIKTRRGRGEAAIVEDVTFRHIEMEKV 274
>gi|345299336|ref|YP_004828694.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093273|gb|AEN64909.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 430
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 26/248 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I S I + + + S FWN+H Y ++ + V I A P+TDGID DS
Sbjct: 147 RPRNILVYESERITLRDFTSRESGFWNVHLCYSRHITLDSVQISNSA-GPSTDGIDIDSC 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V +E +S DD + +K+G + + + I IR T +S SGI +GSETSGG
Sbjct: 206 EQVRVERCVVSCNDDNICIKAGRGQEAASKARSARDIVIRDCTPNSG-SGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA---------- 180
+E VL EH GVG +K+ RGGFIR+I V + + + R + I
Sbjct: 265 IERVLIEHNRFNGTGVGFRIKSARNRGGFIRDIKVRHLQLVDVRFPVMIQLNWFAQYSYG 324
Query: 181 --GDVGDHP-------DDKFNPNALPVVNGITIKDVWGTKVQQS-----GLIQGLKNSPF 226
GD+ D P DD L V+ +T++++ + + S I+G + P
Sbjct: 325 ERGDLTDKPDHWRKLADDVQGEAGLTHVSNLTLENISARRSESSVFSRAFFIEGYPDRPV 384
Query: 227 TGICLSNI 234
+ + L+++
Sbjct: 385 SALTLASV 392
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ +++++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 188 PWLRPVLLSLAKCKNVLLKGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQNGDALDL 247
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S +N + ++ GDD + +KSG DE G G P + ++ G VGSE
Sbjct: 248 ESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKNNVVLHGHGGFVVGSEM 307
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
SGGV+N+ VG+ K+ GRGG + NI + ++ M
Sbjct: 308 SGGVKNIYVSDCTFLGTDVGLRFKSTRGRGGVVENIHIHNINM 350
>gi|420263795|ref|ZP_14766431.1| glycoside family 77 [Enterococcus sp. C1]
gi|394769237|gb|EJF49100.1| glycoside family 77 [Enterococcus sp. C1]
Length = 537
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
R LI M +++I ++ + + P W +H +YC VV VTI + N DG DPDSS
Sbjct: 263 RGRLICMMQAKNIHLTELTLIDPPCWTVHMIYCDTVVTHGVTIQSKG-IDNGDGWDPDSS 321
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ I D+ TGDD +A+KSG + G P+ I + + GIA+GSE SGG
Sbjct: 322 QNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNIRLFDLAIRGG-HGIAIGSEQSGG 380
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
VEN+ L N G+ +K RGG+IR +T++D ++ +A V + D +
Sbjct: 381 VENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRF-----MAHPVAYNADGQ 435
Query: 191 FNPNALPVVNGITIKDV----WGTKVQQSGLI--QGLKNSPFTGICLSNINLQGVAGPTS 244
LP+++ I +K+ V+ G + Q + SP + ++ + G
Sbjct: 436 -AAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQVSPIQRVTFESVAFESAKGQKK 494
Query: 245 PPL-KCSDVS 253
+C ++S
Sbjct: 495 MIFEQCQEIS 504
>gi|325568850|ref|ZP_08145143.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
gi|325157888|gb|EGC70044.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
Length = 537
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
R LI M +++I ++ + + P W +H +YC VV VTI + N DG DPDSS
Sbjct: 263 RGRLICMMQAKNIHLTELTLIDPPCWTVHMIYCDTVVTHGVTIQSKG-IDNGDGWDPDSS 321
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ I D+ TGDD +A+KSG + G P+ I + + GIA+GSE SGG
Sbjct: 322 QNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNIRLFDLAIRGG-HGIAIGSEQSGG 380
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
VEN+ L N G+ +K RGG+IR +T++D ++ +A V + D +
Sbjct: 381 VENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRF-----MAHPVAYNADGQ 435
Query: 191 FNPNALPVVNGITIKDV----WGTKVQQSGLI--QGLKNSPFTGICLSNINLQGVAGPTS 244
LP+++ I +K+ V+ G + Q + SP + ++ + G
Sbjct: 436 -AAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQVSPIQRVTFESVAFESAKGQKK 494
Query: 245 PPL-KCSDVS 253
+C ++S
Sbjct: 495 MIFEQCQEIS 504
>gi|334124103|ref|ZP_08498112.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
gi|333389102|gb|EGK60268.1| exo-poly-alpha-D-galacturonosidase [Enterobacter hormaechei ATCC
49162]
Length = 430
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 117/248 (47%), Gaps = 26/248 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I S++I++ + + S FWN+H Y ++ + V I A P+TDGID DS
Sbjct: 147 RPRNILIFESQTILLRDFTSRESGFWNMHLCYSRHIEVEGVQISNSA-GPSTDGIDIDSC 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V +E +S DD + +KSG + I IR T + SGI +GSETSGG
Sbjct: 206 EQVRVERCIVSCNDDNICIKSGRGYEAAQKARTARDIVIRGCTLNKG-SGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA---------- 180
+E VL E GVG +K+ RGGFIR+I V ++ + + R + I
Sbjct: 265 IERVLIEDNAFNGTGVGFRIKSARNRGGFIRDIIVQNLRLTDVRFPVLIQLNWFPQYSYG 324
Query: 181 --GDVGDHPDDKFNPNA-------LPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPF 226
GD+ D P+ A L VV+G+TI ++ + ++ I+G P
Sbjct: 325 DRGDLADKPEHWRKLAAGVEGDAGLTVVSGLTINNITARRSDNKCFSRAFFIEGYPERPV 384
Query: 227 TGICLSNI 234
G+ L I
Sbjct: 385 AGLTLEGI 392
>gi|431796697|ref|YP_007223601.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787462|gb|AGA77591.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 539
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P I + + + I V + + FWNI PVYC V+IR VT+ + P DGID +SS
Sbjct: 224 PMFISPTDCKDVYIEGVTLERTAFWNIVPVYCDGVIIRGVTVNS-VGIPRGDGIDIESSR 282
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
NV IE S ++ GDD +K+G + GI P+ + +R GI +GSET+G +
Sbjct: 283 NVLIEYSTLNNGDDCFTMKAGRGKDGIRVNKPTENVVVRYCLAKEGHGGITIGSETAGKI 342
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--------IAGDV 183
N+ N GVGI KT RGG +N+ + M + + GD+
Sbjct: 343 NNLYIHDCVFDNTGVGIRFKTRRPRGGGGQNLYYERLRMNLRQTAFRWDMLGQELYVGDL 402
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNI 234
+ + P ITIKD+ I G+ SP + + N+
Sbjct: 403 AKRKPPRAVNDLTPKFKDITIKDILVETASTFVNINGIPESPLENLHMENV 453
>gi|182415146|ref|YP_001820212.1| galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
gi|177842360|gb|ACB76612.1| Galacturan 1,4-alpha-galacturonidase [Opitutus terrae PB90-1]
Length = 478
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 24/239 (10%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L + R ++I + +++V NS +++ P +++ I V + AP ++PNTD ID
Sbjct: 223 LVYKRTHMIIIDGCERLRVADVTLSNSAMFHLVPRRITDLTIERVKVRAPEEAPNTDAID 282
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSG-----WDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
P S +N I I TGDD + +KSG ++ I +GH GI
Sbjct: 283 PGSVTNAWIHHCDIDTGDDNIVIKSGGTNILIEDCVIKHGH-----------------GI 325
Query: 122 AVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG 181
++GSET+ GV N+L + GI +K+ G GG + NI + + M++ I +
Sbjct: 326 SIGSETTEGVRNMLVRRCSFDGTDNGIRIKSMRGAGGVVENIRYTGITMKDVENAIVLDL 385
Query: 182 DVGD--HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
D P+ + +P +PV+ I I V T ++G I GL +SP +G+ L ++ +Q
Sbjct: 386 TYTDNNRPNFRGDPTKIPVIRDILIDHVTVTGSLKAGKIVGLPDSPISGVTLRDVTIQA 444
>gi|419957067|ref|ZP_14473133.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|388607225|gb|EIM36429.1| glycoside hydrolase family protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 430
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 124/272 (45%), Gaps = 31/272 (11%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I S++I++ + + S FWNIH Y + + V I A P+TDGID DS
Sbjct: 147 RPRNILVFESQNILLRDFTSRESGFWNIHLCYSRRIAVEAVQISNSA-GPSTDGIDVDSC 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V IE +S DD + +KSG + I IR T + SGI +GSETSGG
Sbjct: 206 EQVRIERCIVSCNDDNICIKSGRGREAAQKARTARDIVIRGCTLNKG-SGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD------VG 184
+E VL E GVG +K+ RGGFIR+ITV ++ + + R + I + G
Sbjct: 265 IERVLIEDNAFNGTGVGFRIKSARNRGGFIRDITVQNLRLTDVRFPVLIQLNWFPQYSYG 324
Query: 185 DHPDDKFNPN-------------ALPVVNGITIKDVWGTK-----VQQSGLIQGLKNSPF 226
D + P L V+G+TIK++ + ++ I+G P
Sbjct: 325 DQSNLSDKPEHWRKLAEGVEGEAGLTEVSGLTIKNMTARRSDKKYFSRAFFIEGYPERPV 384
Query: 227 TGICLSNINLQGVAGPTSPPLKCSDVSGSAYQ 258
G + L+G+ + K S V G +Q
Sbjct: 385 AG-----LTLEGIFIDATEFGKISGVDGLRFQ 411
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ + V + P S N D +D +
Sbjct: 233 WLRPVLLSIVKSKRVLLEGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPWYSQNGDALDVE 292
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV + +S GDD + +KSG + G G P + ++ T G VGSE S
Sbjct: 293 SCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKNNTVLHGHGGFVVGSEMS 352
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GGV NV VG+ K+ GRGG + N+ V ++ M N
Sbjct: 353 GGVRNVYVADCTFIGTDVGLRFKSTRGRGGVVENVYVDNINMIN 396
>gi|257883313|ref|ZP_05662966.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|294622163|ref|ZP_06701235.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|424791207|ref|ZP_18217685.1| polygalacturonase [Enterococcus faecium V689]
gi|424796702|ref|ZP_18222393.1| polygalacturonase [Enterococcus faecium S447]
gi|424949498|ref|ZP_18365166.1| polygalacturonase [Enterococcus faecium R496]
gi|424953671|ref|ZP_18368620.1| polygalacturonase [Enterococcus faecium R494]
gi|424956677|ref|ZP_18371442.1| polygalacturonase [Enterococcus faecium R446]
gi|424968089|ref|ZP_18381747.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994453|ref|ZP_18406390.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998615|ref|ZP_18410289.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001111|ref|ZP_18412641.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005192|ref|ZP_18416457.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011657|ref|ZP_18422540.1| polygalacturonase [Enterococcus faecium E422]
gi|425017825|ref|ZP_18428310.1| polygalacturonase [Enterococcus faecium C621]
gi|425032265|ref|ZP_18437333.1| polygalacturonase [Enterococcus faecium 515]
gi|425039363|ref|ZP_18443906.1| polygalacturonase [Enterococcus faecium 513]
gi|427397514|ref|ZP_18889996.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430860949|ref|ZP_19478544.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430968697|ref|ZP_19487858.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|431017550|ref|ZP_19490427.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|431261224|ref|ZP_19505721.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|431777891|ref|ZP_19566132.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|431783620|ref|ZP_19571718.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|431786792|ref|ZP_19574790.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|447913735|ref|YP_007395147.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|257818971|gb|EEV46299.1| glycoside hydrolase [Enterococcus faecium 1,231,502]
gi|291598332|gb|EFF29421.1| glycoside hydrolase, family 28 [Enterococcus faecium U0317]
gi|402919873|gb|EJX40434.1| polygalacturonase [Enterococcus faecium V689]
gi|402922629|gb|EJX42990.1| polygalacturonase [Enterococcus faecium S447]
gi|402934203|gb|EJX53573.1| polygalacturonase [Enterococcus faecium R496]
gi|402938575|gb|EJX57571.1| polygalacturonase [Enterococcus faecium R494]
gi|402945373|gb|EJX63728.1| polygalacturonase [Enterococcus faecium R446]
gi|402952951|gb|EJX70715.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980028|gb|EJX95661.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982462|gb|EJX97925.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987164|gb|EJY02253.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987438|gb|EJY02501.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995993|gb|EJY10403.1| polygalacturonase [Enterococcus faecium E422]
gi|403003651|gb|EJY17535.1| polygalacturonase [Enterococcus faecium C621]
gi|403013574|gb|EJY26660.1| polygalacturonase [Enterococcus faecium 515]
gi|403016109|gb|EJY28944.1| polygalacturonase [Enterococcus faecium 513]
gi|425722190|gb|EKU85087.1| hypothetical protein HMPREF9307_02172 [Enterococcus durans
FB129-CNAB-4]
gi|430551267|gb|ELA91036.1| glycosyl hydrolase [Enterococcus faecium E1573]
gi|430554867|gb|ELA94435.1| glycosyl hydrolase [Enterococcus faecium E1576]
gi|430559249|gb|ELA98609.1| glycosyl hydrolase [Enterococcus faecium E1578]
gi|430576629|gb|ELB15266.1| glycosyl hydrolase [Enterococcus faecium E1623]
gi|430638495|gb|ELB74426.1| glycosyl hydrolase [Enterococcus faecium E2560]
gi|430644804|gb|ELB80385.1| glycosyl hydrolase [Enterococcus faecium E6012]
gi|430644943|gb|ELB80507.1| glycosyl hydrolase [Enterococcus faecium E6045]
gi|445189444|gb|AGE31086.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 436
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 210 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V IN + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDINFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
Query: 93 WDEYGIAYGHPSSGITIRRVTGSSPFS-GIAVGSETSGGVENVLAEHINLYNVGVGIHVK 151
WDEYGI+Y PS+ I IR + S S GI++GSE SGGV NV E++ +++ + +K
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 152 TNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTK 211
T GRGG++++IT ++ EN R GI I D +HPD+ ++ A P++ I+ V G
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHGQG 120
Query: 212 VQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCSDVSGSAY-QVKPWPCSEL 267
V+ I G + P + ++++ G+ +C+ V G + P PC L
Sbjct: 121 VRVPVRIHGSEEIPVRNVTFQDMSV-GLTYKKKHIFQCAFVQGRVIGSIFPAPCENL 176
>gi|425055006|ref|ZP_18458501.1| polygalacturonase [Enterococcus faecium 505]
gi|403034856|gb|EJY46278.1| polygalacturonase [Enterococcus faecium 505]
Length = 436
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 210 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V IN + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDINFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|218134189|ref|ZP_03462993.1| hypothetical protein BACPEC_02079 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991564|gb|EEC57570.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 480
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
+R F RP ++ F+ ++I V QNSP WN+HP+ C+N+ + I P + N D
Sbjct: 196 ERHYDFYRPVMVNFVRCDRVLIDGVTLQNSPAWNVHPLLCTNLTVSNAFIKNPYYAQNGD 255
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GID +S V I ++ GDD + +KSG +E G P+ + I T G V
Sbjct: 256 GIDVESCQYVEIYNTKFEVGDDGICLKSGKNEIGRRIKTPTKYVYIHDCTVMHAHGGFVV 315
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
GSE S G+ V ++ VGI K+ +GRGG + NI + ++ M
Sbjct: 316 GSEMSRGMSEVYVQNCAFMGTDVGIRFKSQLGRGGIVENINLENINM 362
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ I V + P S N D +D
Sbjct: 233 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITINNVKVFNPWYSQNGDALDL 292
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG DE G G P + ++ T G VGSE
Sbjct: 293 ESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKNNTVLHGHGGFVVGSEM 352
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ VG+ K+ GRGG +
Sbjct: 353 SGGVKNIYVTDCTFLGTDVGLRFKSTRGRGGVVE 386
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
++ F RP ++ + +++ FQNSP WNIHP+ +++IR +T+ P S N D
Sbjct: 233 EKIKDFLRPVMVSIKGCKQVLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWYSQNGD 292
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D +S NV I ++ GDD + KSG +E G G P+ + ++ G +
Sbjct: 293 GLDLESCKNVLIYNNSFDVGDDAICFKSGKNEDGRRRGVPTENVIVKNNVVYHGHGGFVI 352
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
GSE SGGV NV + VG+ K+ GRGG + NI + ++ M
Sbjct: 353 GSEMSGGVRNVHVANCTFIGTDVGLRFKSTRGRGGVVENIYIFNIDM 399
>gi|339022449|ref|ZP_08646391.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
gi|338750533|dbj|GAA09695.1| glycoside hydrolase family 28 [Acetobacter tropicalis NBRC 101654]
Length = 438
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 21/259 (8%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LIEF + + IS V NSP W + S + I ++TI PA S NTDGID SS
Sbjct: 156 RPWLIEFSHVQHGRISGVTATNSPMWTVVVRESSQIKIDHLTIRNPASSRNTDGIDLVSS 215
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V + I+TGDD +A+KSG + G A S IT R G+++GSE + G
Sbjct: 216 DHVTMSTLDIATGDDNIAIKSGLRQPGRAVSDIS--ITQSRF---GEGHGLSIGSELANG 270
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP--- 187
++ ++ N G+ +K+ RGG I I+ V M + R + I+ P
Sbjct: 271 AHHIRISDVSFQNTLSGLRIKSGRDRGGDIGWISAEHVMMNHVRAPLSISDYYAGQPGGT 330
Query: 188 ------DDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D P + P ++ +TI D+ + +G++ GL +P G+ L NI L
Sbjct: 331 QKTVSMTDPAAPVTSTTPHIHDVTITDLTAKNAETAGVVLGLPEAPIEGLTLRNIRLSAR 390
Query: 240 AGPTSPPLKCSDVSGSAYQ 258
G L+ S VSG A +
Sbjct: 391 KG-----LQFSHVSGRASE 404
>gi|325105247|ref|YP_004274901.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974095|gb|ADY53079.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 456
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I+F ++I+I V NSPFW +H + N+ R V A + N DG DP+
Sbjct: 202 FLRPQFIQFFECKNILIEGVTITNSPFWCVHFLKSENITARKVKF--DAFNKNNDGFDPE 259
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR--RVTGSSPFSGIAVGSE 126
S NV IED + DD +A+K+G D G G S I IR R G G+ +GSE
Sbjct: 260 YSKNVLIEDIDFNNADDNIAIKAGRDYEGRRIGLTSENIIIRNCRFKG---LHGVVIGSE 316
Query: 127 TSGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDV 168
S GV+NV E+ GI++K+N RGGFIR+I +++V
Sbjct: 317 MSAGVQNVFVENCTYGGYCKRGIYLKSNPDRGGFIRDIYINNV 359
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ I++ V F+NSP W +HP+ C + + + ++ P S N D ID
Sbjct: 235 PWLRPVLLSIVKSKKILLEGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWYSQNGDAIDL 294
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KS DE G G P + ++ T G VGSE
Sbjct: 295 ESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKNNTVLHGHGGFVVGSEM 354
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ E VG+ K+ GRGG +
Sbjct: 355 SGGVKNIYVEDCTFMGTDVGLRFKSTRGRGGVVE 388
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 109/239 (45%), Gaps = 13/239 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN + N ++I + + NSP W +HP Y N++ TI+ P +SPNTDG+DP+S
Sbjct: 222 RPNTVFLYNCKNIAMQGLCIMNSPSWTLHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESC 281
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I + IS GDD VA+KSG + + P+ I IR + +GSE + G
Sbjct: 282 ENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRNSIFRKGHGSVTIGSEVAAG 341
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENA----RKGIKIAGDVG 184
V +V G+ +KT GRG + NI ++ M++ + D
Sbjct: 342 VYDVRVGKCIFEGTDRGLRIKTRRGRGEKSVLDNICFENILMKDVCMPFTANMFYFCDPD 401
Query: 185 DHPD-----DKFNPN-ALPVVNGITIKDVWGTKVQQ-SGLIQGLKNSPFTGICLSNINL 236
H D DK N P + I +D+ V+ + GL P I L NI L
Sbjct: 402 GHSDYVQNQDKMEVNEKTPKIGKIAARDIRCENVKNIFACLYGLPEMPVEEIVLENITL 460
>gi|261207238|ref|ZP_05921927.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289567178|ref|ZP_06447568.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|294614358|ref|ZP_06694275.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430850287|ref|ZP_19468050.1| glycosyl hydrolase [Enterococcus faecium E1185]
gi|260078866|gb|EEW66568.1| glycoside hydrolase, family 28 [Enterococcus faecium TC 6]
gi|289161037|gb|EFD08947.1| glycoside hydrolase, family 28 [Enterococcus faecium D344SRF]
gi|291592830|gb|EFF24422.1| glycoside hydrolase, family 28 [Enterococcus faecium E1636]
gi|430535912|gb|ELA76303.1| glycosyl hydrolase [Enterococcus faecium E1185]
Length = 436
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV I + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 210 TNVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 15/255 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI + +I+ + +NSP W +HP++ + + I APADSPNTDG++P+SS
Sbjct: 217 RPRLIFMVECEQVILQGMTLKNSPSWTVHPLFSRGLTFVDLRIEAPADSPNTDGLNPESS 276
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+++ I + GDD +A+KSG P+ + I + +GSE + G
Sbjct: 277 TDIVISGVDFAVGDDCIALKSGKISMARRSVRPTRRVRISNCRMKDGHGAVVIGSEMACG 336
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
V ++ + N GI +KT GRG IR + + ME I PD
Sbjct: 337 VYDISVQTCLFINTDRGIRLKTRRGRGREAVIRGLNCRHIRMEGVGSAFVINSFYWCDPD 396
Query: 189 DK------FNPNAL----PVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 237
K NP + P + I + + V+ +GL + GL P G+ L +I L+
Sbjct: 397 GKTDEVADRNPRPVDEGTPSIGDIRLSHIDAIGVRHAGLYVLGLPEQPVDGLTLDHIRLR 456
Query: 238 --GVAGPTSPPLKCS 250
A P P + S
Sbjct: 457 FDPQAKPGEPDMAAS 471
>gi|430854301|ref|ZP_19472017.1| glycosyl hydrolase [Enterococcus faecium E1258]
gi|430539030|gb|ELA79293.1| glycosyl hydrolase [Enterococcus faecium E1258]
Length = 436
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IICNNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 210 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 108/237 (45%), Gaps = 13/237 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++++I + +NSP W IHP+ N+ + I P D+PNTDG+DP+S
Sbjct: 222 RPRTVYLNKCKNVLIEGITIKNSPSWTIHPLMSQNLKFVNLNIENPKDAPNTDGLDPESC 281
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I + S GDD +A+KSG PS + IR + +GSE SGG
Sbjct: 282 KDVLIVGTRFSVGDDCIAIKSGKLSVSQKLPMPSENLIIRNCLMEYGHGAVVIGSEMSGG 341
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAG----DVG 184
V+NV E+ GI +KT GRG G I I S++ ME I D
Sbjct: 342 VKNVHVENCIFRKTDRGIRIKTRRGRGKTGVIDEIHASNIRMEGVLTPFTINSFYFCDAD 401
Query: 185 DHPDDKFNPNALPV------VNGITIKDVWGTKVQ-QSGLIQGLKNSPFTGICLSNI 234
+ ++ LPV V I +KD+ Q +G + GL + + NI
Sbjct: 402 GKTEYVWSKEKLPVDDRTPYVGNIYLKDITCIDTQVAAGYMYGLPERKIERVDMENI 458
>gi|293557205|ref|ZP_06675755.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
gi|291600657|gb|EFF30959.1| glycoside hydrolase, family 28 [Enterococcus faecium E1039]
Length = 443
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 158 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSS 216
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 217 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 275
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 276 VSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 315
>gi|431703877|ref|ZP_19525103.1| glycosyl hydrolase [Enterococcus faecium E1904]
gi|430596723|gb|ELB34539.1| glycosyl hydrolase [Enterococcus faecium E1904]
Length = 436
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 210 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIRDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Query: 5 RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDG 64
+ L F RP L + + ++ I + ++NSPFW IH VY N+ I V ILA +S NTDG
Sbjct: 75 QNLKFERPRLFQCLFCKNFKIEKLTWKNSPFWTIHFVYSENIEIADVAILAEHESRNTDG 134
Query: 65 IDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF--SGIA 122
ID DSSSNV I D +I GDD++A+KSG+D G +G P+ + + +S F A
Sbjct: 135 IDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVE----NSVFINENFA 190
Query: 123 VGSETSGGVE 132
+GSE SGGV+
Sbjct: 191 IGSEMSGGVQ 200
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 1 MWRQRTL----PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
+W QR + RP LI SR++ I + NSP +++ P C NV I+ +TI AP
Sbjct: 116 VWWQRFIDSGKTLNRPRLIYLTRSRNVTIDGLTLINSPSFHLVPSQCQNVTIQNLTITAP 175
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
+DSPNTDGIDP + ++V I++ I GDD +A+K G I P I IR
Sbjct: 176 SDSPNTDGIDPANCTHVLIQNCTIDNGDDNIAIKGGRSNGQIV--QPCQDIQIRNCRFLH 233
Query: 117 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 176
G++VGSETS GV +V + GI +K+ G GG I+N++ S + M N
Sbjct: 234 GH-GLSVGSETSSGVSSVSVTNCTFTGTTNGIRIKSQPGLGGAIQNLSYSQITMTNVTNP 292
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+ I + ++ + + +P V+G+TI + T + +G + GL NS + LSN+ +
Sbjct: 293 LIIDLAYSLNNNNGYASD-IPSVSGLTIDQLSVTGAKNAGSLVGLTNSLLQNLTLSNLQI 351
Query: 237 QGVAGPTSPPLKCSDVSGSAYQVK 260
G + +++ SAY+++
Sbjct: 352 SAQTGLVLQNAR--NITMSAYRIQ 373
>gi|430824494|ref|ZP_19443051.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430868568|ref|ZP_19482862.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|431744399|ref|ZP_19533267.1| glycosyl hydrolase [Enterococcus faecium E2071]
gi|430441022|gb|ELA51165.1| glycosyl hydrolase [Enterococcus faecium E0120]
gi|430548832|gb|ELA88680.1| glycosyl hydrolase [Enterococcus faecium E1574]
gi|430605142|gb|ELB42547.1| glycosyl hydrolase [Enterococcus faecium E2071]
Length = 436
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 210 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|257886390|ref|ZP_05666043.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
gi|257822246|gb|EEV49376.1| glycoside hydrolase [Enterococcus faecium 1,231,501]
Length = 436
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 210 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|257880502|ref|ZP_05660155.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257891467|ref|ZP_05671120.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257894590|ref|ZP_05674243.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260562501|ref|ZP_05833011.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|293559900|ref|ZP_06676412.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|293568218|ref|ZP_06679552.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|314938533|ref|ZP_07845818.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942449|ref|ZP_07849289.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314952938|ref|ZP_07855905.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992207|ref|ZP_07857650.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995236|ref|ZP_07860348.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329848|ref|YP_005355732.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|406581503|ref|ZP_11056645.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583794|ref|ZP_11058839.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586138|ref|ZP_11061075.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591702|ref|ZP_11065948.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936303|ref|ZP_11368170.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|415891700|ref|ZP_11549789.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|416141648|ref|ZP_11599441.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|424845982|ref|ZP_18270582.1| polygalacturonase [Enterococcus faecium R501]
gi|424854970|ref|ZP_18279301.1| polygalacturonase [Enterococcus faecium R499]
gi|424907683|ref|ZP_18331153.1| polygalacturonase [Enterococcus faecium R497]
gi|424960554|ref|ZP_18375059.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964733|ref|ZP_18378800.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971125|ref|ZP_18384586.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974628|ref|ZP_18387853.1| polygalacturonase [Enterococcus faecium P1137]
gi|424981126|ref|ZP_18393878.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983701|ref|ZP_18396276.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987499|ref|ZP_18399873.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424992279|ref|ZP_18404358.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007167|ref|ZP_18418312.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014690|ref|ZP_18425355.1| polygalacturonase [Enterococcus faecium E417]
gi|425021599|ref|ZP_18431838.1| polygalacturonase [Enterococcus faecium C497]
gi|425023083|ref|ZP_18433222.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034686|ref|ZP_18439563.1| polygalacturonase [Enterococcus faecium 514]
gi|425042059|ref|ZP_18446425.1| polygalacturonase [Enterococcus faecium 511]
gi|425046653|ref|ZP_18450650.1| polygalacturonase [Enterococcus faecium 510]
gi|425047905|ref|ZP_18451836.1| polygalacturonase [Enterococcus faecium 509]
gi|425051840|ref|ZP_18455481.1| polygalacturonase [Enterococcus faecium 506]
gi|425060678|ref|ZP_18463962.1| polygalacturonase [Enterococcus faecium 503]
gi|430821821|ref|ZP_19440408.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430827440|ref|ZP_19445583.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430830082|ref|ZP_19448148.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430832646|ref|ZP_19450686.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430845573|ref|ZP_19463457.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430848406|ref|ZP_19466225.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430856188|ref|ZP_19473891.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430921156|ref|ZP_19485323.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|431220446|ref|ZP_19501380.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|431243678|ref|ZP_19503851.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|431323331|ref|ZP_19509135.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|431388094|ref|ZP_19511700.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|431472779|ref|ZP_19514507.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|431520920|ref|ZP_19516634.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|431565479|ref|ZP_19519841.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|431747812|ref|ZP_19536581.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|431750357|ref|ZP_19539076.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|431755435|ref|ZP_19544084.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|431761409|ref|ZP_19549983.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|431766527|ref|ZP_19555004.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|431769102|ref|ZP_19557530.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|431771653|ref|ZP_19560033.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|431774523|ref|ZP_19562830.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|431780630|ref|ZP_19568803.1| glycosyl hydrolase [Enterococcus faecium E4389]
gi|257814730|gb|EEV43488.1| glycoside hydrolase [Enterococcus faecium 1,230,933]
gi|257827827|gb|EEV54453.1| glycoside hydrolase [Enterococcus faecium 1,231,410]
gi|257830969|gb|EEV57576.1| glycoside hydrolase [Enterococcus faecium 1,231,408]
gi|260073186|gb|EEW61531.1| glycoside hydrolase, family 28 [Enterococcus faecium C68]
gi|291589118|gb|EFF20932.1| glycoside hydrolase, family 28 [Enterococcus faecium E1071]
gi|291606172|gb|EFF35594.1| glycoside hydrolase, family 28 [Enterococcus faecium E1162]
gi|313590492|gb|EFR69337.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593265|gb|EFR72110.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595010|gb|EFR73855.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598757|gb|EFR77602.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642161|gb|EFS06741.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|364090042|gb|EHM32674.1| glycoside hydrolase, family 28 [Enterococcus faecium E4452]
gi|364093760|gb|EHM35997.1| glycoside hydrolase, family 28 [Enterococcus faecium E4453]
gi|378939542|gb|AFC64614.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|402919810|gb|EJX40376.1| polygalacturonase [Enterococcus faecium R501]
gi|402930037|gb|EJX49740.1| polygalacturonase [Enterococcus faecium R497]
gi|402931903|gb|EJX51454.1| polygalacturonase [Enterococcus faecium R499]
gi|402945951|gb|EJX64271.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947336|gb|EJX65555.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955971|gb|EJX73460.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959993|gb|EJX77186.1| polygalacturonase [Enterococcus faecium P1139]
gi|402964601|gb|EJX81373.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970834|gb|EJX87147.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402973957|gb|EJX90038.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402974321|gb|EJX90380.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402995601|gb|EJY10044.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402998000|gb|EJY12285.1| polygalacturonase [Enterococcus faecium E417]
gi|403006140|gb|EJY19807.1| polygalacturonase [Enterococcus faecium C497]
gi|403010837|gb|EJY24182.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019832|gb|EJY32411.1| polygalacturonase [Enterococcus faecium 514]
gi|403023546|gb|EJY35791.1| polygalacturonase [Enterococcus faecium 510]
gi|403024469|gb|EJY36625.1| polygalacturonase [Enterococcus faecium 511]
gi|403032233|gb|EJY43801.1| polygalacturonase [Enterococcus faecium 509]
gi|403036566|gb|EJY47912.1| polygalacturonase [Enterococcus faecium 506]
gi|403042389|gb|EJY53347.1| polygalacturonase [Enterococcus faecium 503]
gi|404452562|gb|EJZ99746.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456117|gb|EKA02874.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461646|gb|EKA07540.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467225|gb|EKA12407.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735249|gb|EKQ77163.1| polygalacturonase [Enterococcus sp. GMD5E]
gi|430438093|gb|ELA48581.1| glycosyl hydrolase [Enterococcus faecium E0045]
gi|430444048|gb|ELA53960.1| glycosyl hydrolase [Enterococcus faecium E0164]
gi|430479137|gb|ELA56411.1| glycosyl hydrolase [Enterococcus faecium E0269]
gi|430479701|gb|ELA56917.1| glycosyl hydrolase [Enterococcus faecium E0333]
gi|430495380|gb|ELA71555.1| glycosyl hydrolase [Enterococcus faecium E1050]
gi|430534977|gb|ELA75402.1| glycosyl hydrolase [Enterococcus faecium E1133]
gi|430545274|gb|ELA85257.1| glycosyl hydrolase [Enterococcus faecium E1392]
gi|430554049|gb|ELA93721.1| glycosyl hydrolase [Enterococcus faecium E1575]
gi|430569541|gb|ELB08542.1| glycosyl hydrolase [Enterococcus faecium E1620]
gi|430571647|gb|ELB10533.1| glycosyl hydrolase [Enterococcus faecium E1622]
gi|430577979|gb|ELB16555.1| glycosyl hydrolase [Enterococcus faecium E1626]
gi|430580359|gb|ELB18832.1| glycosyl hydrolase [Enterococcus faecium E1627]
gi|430583564|gb|ELB21926.1| glycosyl hydrolase [Enterococcus faecium E1630]
gi|430585063|gb|ELB23364.1| glycosyl hydrolase [Enterococcus faecium E1634]
gi|430589388|gb|ELB27517.1| glycosyl hydrolase [Enterococcus faecium E1731]
gi|430604699|gb|ELB42134.1| glycosyl hydrolase [Enterococcus faecium E2134]
gi|430609784|gb|ELB46961.1| glycosyl hydrolase [Enterococcus faecium E2297]
gi|430616657|gb|ELB53552.1| glycosyl hydrolase [Enterococcus faecium E2883]
gi|430621550|gb|ELB58311.1| glycosyl hydrolase [Enterococcus faecium E3346]
gi|430626087|gb|ELB62675.1| glycosyl hydrolase [Enterococcus faecium E4215]
gi|430628018|gb|ELB64476.1| glycosyl hydrolase [Enterococcus faecium E1321]
gi|430632927|gb|ELB69117.1| glycosyl hydrolase [Enterococcus faecium E1644]
gi|430633928|gb|ELB70073.1| glycosyl hydrolase [Enterococcus faecium E2369]
gi|430639085|gb|ELB74967.1| glycosyl hydrolase [Enterococcus faecium E4389]
Length = 436
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 210 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|424978123|ref|ZP_18391071.1| polygalacturonase [Enterococcus faecium P1123]
gi|402963044|gb|EJX79942.1| polygalacturonase [Enterococcus faecium P1123]
Length = 426
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 141 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSS 199
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 200 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 258
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 259 VSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 298
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 210 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRKRGGVIENIRVENLNM 308
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 80/140 (57%)
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
SGG+++V AE I + GI +KT +GRGG+ ++I V + M + + G+ G H
Sbjct: 2 SGGIQDVRAEDITAIHTESGIRIKTAVGRGGYGKDIYVQRMTMHTMKWTFWMTGNYGSHA 61
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 247
D ++PNALP + GI +D+ +V +G ++G+ N FTGIC++N+ + A P
Sbjct: 62 DKNYDPNALPEIKGINYRDMVADEVTMAGNLEGISNDQFTGICIANVTISMAAKSKKQPW 121
Query: 248 KCSDVSGSAYQVKPWPCSEL 267
CSDV G V P PC+ L
Sbjct: 122 TCSDVEGITSGVTPKPCNLL 141
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 210 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 210 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 158 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSS 216
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 217 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 275
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
+ +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 276 ISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 315
>gi|304396605|ref|ZP_07378486.1| glycoside hydrolase family 28 [Pantoea sp. aB]
gi|304356114|gb|EFM20480.1| glycoside hydrolase family 28 [Pantoea sp. aB]
Length = 430
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + S + + + Q+S FWN+H Y V ++ + ++ A P+TDGID DSS
Sbjct: 147 RPRNVVVYESECVTLEDFTSQDSGFWNLHVCYSKQVNLQRLRVM-NATGPSTDGIDIDSS 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V +E +S DD + VKSG G + I IR T SGI +GSETSGG
Sbjct: 206 QLVRVESCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDCTLLKG-SGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
+ENV+ EH GVG +K+ RGG+I+NI V + ME+
Sbjct: 265 IENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMED 306
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 210 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F +P I +N +++I + + S FWN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 199 FYKPKTISPINCTNVLIEGITMERSTFWNVCPIYCENVIIRGITVNSIG-IPSGDGIDIE 257
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR G+ GSET+
Sbjct: 258 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQQGHGGVTCGSETA 317
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--IAGD---V 183
GGV+NV +GI KT R G + + + M N + K + G V
Sbjct: 318 GGVKNVYVHDCVFDGTQIGIRFKTRRNRAGGVNDALYEKIRMINVGEAFKWDLLGSKRYV 377
Query: 184 GDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
G+ +++ P A+ P + I IK+ ++ + G+ P + + + N
Sbjct: 378 GELA-ERYPPRAVNKLTPTIKDIHIKNFIVESAEKILSVNGIPEIPCSNVLIEN 430
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 210 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 308
>gi|69249564|ref|ZP_00605017.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|389869657|ref|YP_006377080.1| glycosyl hydrolase [Enterococcus faecium DO]
gi|68194111|gb|EAN08650.1| Glycoside hydrolase, family 28 [Enterococcus faecium DO]
gi|388534906|gb|AFK60098.1| glycosyl hydrolase [Enterococcus faecium DO]
Length = 317
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID
Sbjct: 148 AIKRPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDI 206
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
DSS+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE
Sbjct: 207 DSSTNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEV 265
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
S GV +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 266 SAGVSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 4/169 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I ++I++ +PFW IHP+ NV IR V + + N DG DP+S
Sbjct: 182 RPQFINLYKCKNILLEGFTINRAPFWLIHPLLSENVTIRKVKM--QSHGYNNDGCDPESC 239
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV IE TGDD +A+KSG DE G + PS I +R +G+A+GSE +GG
Sbjct: 240 NNVLIEYCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCRMKDGHAGVAIGSEVTGG 299
Query: 131 VENVLAEHINLYNVGVG--IHVKTNIGRGGFIRNITVSDVYMENARKGI 177
NV E+ + + + I +K+N RGG + N+ V ++++ ++ I
Sbjct: 300 CRNVWVENCRMDSPELDRIIRIKSNAIRGGEVENLFVRNIFVGECKESI 348
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS
Sbjct: 127 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSS 185
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 186 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 244
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 245 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 284
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ + I+ D P+TDGID DSS
Sbjct: 127 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSS 185
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 186 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 244
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 245 VSDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 284
>gi|308185704|ref|YP_003929835.1| polygalacturonase [Pantoea vagans C9-1]
gi|308056214|gb|ADO08386.1| Putative polygalacturonase precursor [Pantoea vagans C9-1]
Length = 352
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + S + + + Q+S FWN+H Y V ++ + ++ A P+TDGID DSS
Sbjct: 147 RPRNVVVYESECVTLEDFTSQDSGFWNLHVCYSKQVNLQRLRVM-NATGPSTDGIDIDSS 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V +E +S DD + VKSG G + I IR T SGI +GSETSGG
Sbjct: 206 QLVRVEGCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDCTLLKG-SGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
+ENV+ EH GVG +K+ RGG+I+NI V + ME+
Sbjct: 265 IENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMED 306
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ ++I ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 127 RPRACLLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSS 185
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
++V I + ++ GDD +A+KSG D G SS I I R S + G+ +GSE S G
Sbjct: 186 TDVRIYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCNIRSGY-GVTIGSEVSAG 244
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
+ +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 245 ISDVYIHDIDFFQSDCGIRMKSSRERGGVIENIRVENLNM 284
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 19/239 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ +++I + +NSPFW ++PV C++V + VT + PN+DG DP+
Sbjct: 231 YLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTF--SSHGPNSDGCDPE 288
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S ++V I++ TGDD +A+KSG + G S I I G+ +GSE S
Sbjct: 289 SCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHGGVVIGSEIS 348
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GGV NV ++ + ++ I +KTN RGG I +I + ++ + + I I G
Sbjct: 349 GGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEG 408
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGV 239
D G +F+ P+V I I ++ V L + G P I L+N + V
Sbjct: 409 DAG-----QFD----PIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTNSHFDQV 458
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 117/239 (48%), Gaps = 19/239 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP I+ +++I + +NSPFW ++PV C++V + VT + PN+DG DP+
Sbjct: 231 YLRPPFIQPYRCNNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTF--SSHGPNSDGCDPE 288
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S ++V I++ TGDD +A+KSG + G S I I G+ +GSE S
Sbjct: 289 SCNHVHIKNCVFDTGDDCIAIKSGRNADGRRVNTASQNIVIENCHMKEGHGGVVIGSEIS 348
Query: 129 GGVENVLAEHINLY--NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-----AG 181
GGV NV ++ + ++ I +KTN RGG I +I + ++ + + I I G
Sbjct: 349 GGVNNVFVQNCTMDSPHLERAIRIKTNSVRGGLIEHIRIRNIEVGTVKNAIVINFYYEEG 408
Query: 182 DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGV 239
D G +F+ P+V I I ++ V L + G P I L+N + V
Sbjct: 409 DAG-----QFD----PIVRDIKIDNLHCKNVLSKALYLNGFARDPIKDITLTNSHFDQV 458
>gi|414344702|ref|YP_006986194.1| glycoside hydrolase family protein [Gluconobacter oxydans H24]
gi|411030009|gb|AFW03263.1| glycoside hydrolase family 28 [Gluconobacter oxydans H24]
Length = 477
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 130/262 (49%), Gaps = 27/262 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LIEF + + IS V NSP W + S + I ++TI PA S NTDGID SS
Sbjct: 195 RPWLIEFSHVQHGRISGVTATNSPMWTVVVRESSQIRIDHLTIRNPASSRNTDGIDLVSS 254
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS---GIAVGSET 127
+V + + I+TGDD +A+KSG + G A +S I+I + S F G+++GSE
Sbjct: 255 DHVTMSNLEIATGDDNIAIKSGLTQPGQA----ASDISITQ----SRFGEGHGLSIGSEL 306
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI----AGDV 183
+ G ++ ++ N G+ +K+ RGG I I+ + M++ R + I AG
Sbjct: 307 ANGAHHIRISDVSFQNTLSGLRIKSGRDRGGDIGWISAEHLTMDHVRVPLSISDYYAGQP 366
Query: 184 GDHPDDKF--NPNA-----LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
G P A P ++ +TI D+ T G++ GL +P G+ L ++ L
Sbjct: 367 GGTQQTALMTEPAAPVTSTTPHIHDVTITDMTATNAGTVGVVLGLPEAPIEGLTLRHVRL 426
Query: 237 QGVAGPTSPPLKCSDVSGSAYQ 258
G L+ S VSG +++
Sbjct: 427 SARKG-----LQLSHVSGRSFE 443
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 106 bits (265), Expect = 9e-21, Method: Composition-based stats.
Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 20/253 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + + + + +S + +NSP W +HP + + I P DSPNTDG++P+S
Sbjct: 217 RPRALFLAHGQGVQLSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESC 276
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYG-----HPSSGITIRRVTGSSPFSGIAVGS 125
++V + + S GDD +AVKSG G G P+ + + G+ +GS
Sbjct: 277 TDVTLAGIHFSVGDDCIAVKSGKRGTGALKGLAGHLAPTRRLHVHHCLMERGHGGMVLGS 336
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
E SG + +V G+ +KT GRGG + + SDV M+ + I
Sbjct: 337 EMSGDITDVTVTACEFIGTDRGLRIKTRRGRGGEVARVHFSDVLMQGVGTPLAINAFYYC 396
Query: 186 HPDDKFNP-----------NALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSN 233
PD + +P P ++ IT DV T V + + GL +P TG+ L
Sbjct: 397 DPDGR-SPEVQSRSPAPVDETTPKIHDITFSDVIATDVPVCAVAVLGLPEAPVTGVRLK- 454
Query: 234 INLQGVAGPTSPP 246
N + P++PP
Sbjct: 455 -NFRASLDPSAPP 466
>gi|440760701|ref|ZP_20939804.1| Polygalacturonase [Pantoea agglomerans 299R]
gi|436425454|gb|ELP23188.1| Polygalacturonase [Pantoea agglomerans 299R]
Length = 430
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + S + + + Q+S FWN+H Y V ++ + ++ A P+TDGID D+S
Sbjct: 147 RPRNVVVYESECVTLEDFTSQDSGFWNLHVCYSKQVNLQRLRVM-NATGPSTDGIDIDTS 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V +E +S DD + VKSG G + I IR T SGI +GSETSGG
Sbjct: 206 QLVRVESCTVSCNDDNICVKSGRGAEAQQLGRTARDIIIRDCTLLKG-SGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
+ENV+ EH GVG +K+ RGG+I+NI V + ME+
Sbjct: 265 IENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIVVRHLKMED 306
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q+ P P I M S++++I + S W I VY N V+ V ++ +T
Sbjct: 167 QKAAPQLLPMFISLMESKNVLIQGIHIVGSAMWPIQLVYDDNAVVSGV-MVETFGGHDTG 225
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GI DSS NV I D YI TGDD + +KSG D G P+ I+I + +
Sbjct: 226 GIYVDSSRNVRISDCYIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGAVVL 285
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
GSE SG + N++A +I +G+ +KT GRGG I ++ + M+N +GI I+
Sbjct: 286 GSEISGWIRNLVASNITCDGTQMGVRIKTRRGRGGGIEDVRFDNWTMQNVARGINISSFY 345
Query: 184 GDHPDDKFNPNALPVVNGITIKD---VWGTKVQQSGL---IQGLKNSPFTGICLSNINLQ 237
P++K P PV +I + + S L I+G+ P G+ +S+I
Sbjct: 346 VMAPENKSTPPEEPVSERTSIYRNIAISHMTINNSRLVIDIEGIPEMPIDGLRISDI--- 402
Query: 238 GVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 274
+ + + AY K + S +TG
Sbjct: 403 ---------VATAQIGMKAYNTKAMELHNVQLSAKTG 430
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ + + I + + F P W IHP +CS++ I V I+ P DSPNTDGI+P+S
Sbjct: 221 RPRMLFLTHCKHIRVQGLRFSMCPSWCIHPCFCSDLGIYDVEIINPEDSPNTDGINPESC 280
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I + S GDD +A+KSG P S I IR+ + G+ +GSE S G
Sbjct: 281 EHVEIAGCHFSLGDDCIAIKSGKGRRAQENPVPGSHIQIRQCFMENGHGGVTIGSEISSG 340
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
V +V N G+ +KT GRG ++ V V EN
Sbjct: 341 VHHVTVRDCCFRNTDRGLRIKTRRGRG---KSCVVDAVLFEN 379
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +I+I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 272 FYRPKTISPINCTNILIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 330
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 390
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 391 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 450
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 451 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 21/242 (8%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + + +S + +NSP W IHP+ C+ V + I P DSPNTDG++P+SS
Sbjct: 221 RPRTVFANRCTQLKMSGLTVRNSPSWTIHPLDCAGAVFADLAIENPPDSPNTDGLNPESS 280
Query: 71 SNVCIEDSYISTGDDLVAVKSG--WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
+++ I S GDD +A+K+G W + + P+ +++R G+ +GSE S
Sbjct: 281 TDIEIVGVRFSVGDDCIAIKAGKIWPDGTVPA--PTRNVSVRHCLMERGHGGVVIGSEMS 338
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
G V +V + + G+ +KT GRGG + I +SD M+ + + I PD
Sbjct: 339 GSVTDVTVAFCTMRDTDRGLRIKTRRGRGGAVARIVLSDCLMDGVKTPLSINSHYFCDPD 398
Query: 189 DKFNP----------NALPVVNGITIKDVWGTKVQQS----GLIQGLKNSPFTGICLSNI 234
+ + A P + I + T+V+ + + GL +P +G+ ++++
Sbjct: 399 GRSDAVQNRAPAPVSAATPKIGDIRFER---TEVKNAHHALAYVLGLAEAPVSGLTIADV 455
Query: 235 NL 236
++
Sbjct: 456 SV 457
>gi|430837659|ref|ZP_19455621.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430840340|ref|ZP_19458267.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430859280|ref|ZP_19476893.1| glycosyl hydrolase [Enterococcus faecium E1552]
gi|430487173|gb|ELA63943.1| glycosyl hydrolase [Enterococcus faecium E0680]
gi|430489826|gb|ELA66401.1| glycosyl hydrolase [Enterococcus faecium E0688]
gi|430544024|gb|ELA84074.1| glycosyl hydrolase [Enterococcus faecium E1552]
Length = 436
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID D S
Sbjct: 151 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDYS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 210 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RGG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSKERGGVIENIRVENLNM 308
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RPN IEF +++ + + N+PFW IHP+ ++V++ + I + PN DG DP+
Sbjct: 215 YLRPNFIEFFECKNVHLKDFKIVNAPFWIIHPIKSNHVIVDGIHI--ESHGPNNDGCDPE 272
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV I + TGDD +A+K+G D G S I I+ G+ +GSE S
Sbjct: 273 YSKNVIIRNCTFDTGDDCIAIKAGRDSDGRRVAIKSENILIQNCKMFDGHGGVTIGSEIS 332
Query: 129 GGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK---GIKIAGDV 183
GV NV E+ ++ + I +K+N RGG I NI V ++ + ++ GI + V
Sbjct: 333 AGVSNVFVENCIMDSPELDRAIRIKSNTRRGGIIENIYVRNITVGEVKESVLGIDLHYGV 392
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
+ F +P+V I I++ + ++ GL G+ G +SNI + V
Sbjct: 393 HGNQTGTF----MPIVRNIFIEN---STIKNGGL-YGILAKGHPGFPISNIRFKEVT 441
>gi|425057510|ref|ZP_18460923.1| polygalacturonase [Enterococcus faecium 504]
gi|403040305|gb|EJY51392.1| polygalacturonase [Enterococcus faecium 504]
Length = 436
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ +++ ++IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS
Sbjct: 151 RPRACLLYHAEHVVVRDLIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSS 209
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+NV + + ++ GDD +A+KSG D G SS I + R S + G+ +GSE S G
Sbjct: 210 TNVRVYECDLACGDDCIAIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAG 268
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYM 170
V +V I+ + GI +K++ RG I NI V ++ M
Sbjct: 269 VSDVYIHDIDFFQSDCGIRMKSSKERGEVIENIRVENLNM 308
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 272 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 330
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 390
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 391 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 450
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 451 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|322437669|ref|YP_004219759.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165562|gb|ADW71265.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 482
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P L+EF + R++++ +V Q + W+ HPVYC NV R VT+ + A DGID DS
Sbjct: 193 PALMEFTHCRNVLVQDVFTQGNDMWSTHPVYCENVTFRNVTVHSGA-----DGIDVDSCK 247
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT-GSSPFSGIAVGSETSGG 130
V I+ T DD +++KSG G G I I T + ++ I +GSETSGG
Sbjct: 248 GVVIDGCEFVTRDDCISLKSGRGMEGNTIGVVCEDIHISNCTFNDAVWACIGIGSETSGG 307
Query: 131 VENVLAEHINLYNVGV-GIHVKTNIGRGGFIRNITVSDVYMENARKG---IKIAGDVGDH 186
+ NV EH I++K+ GRG FI +I ++D+ + A++G I
Sbjct: 308 IRNVHVEHCKCLGARTFAIYIKSRPGRGAFIEDIYMNDLEVSGAQQGFLRFNILNSGLQD 367
Query: 187 PDDKFNPNALPVV-----NGITIKDVW----GTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
PD + +P + + I +KDV G + ++G + TG C I L
Sbjct: 368 PDPVPGDDGIPTIRNFHFSNIRVKDVPVLVDGASIHPRKPLEGFSLTNVTGTCGKGIRLA 427
Query: 238 G----------VAGPTSPPLKCSDVSGS 255
V G P L +V+G+
Sbjct: 428 NIHHAVIHDVKVTGFAGPLLSTRNVTGT 455
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++++I + +NSP W IHP+ N+ + I P D+PNTDG+DP+S
Sbjct: 222 RPRTVYLNKCKNVLIEGITIRNSPSWTIHPLMSQNLKFINLNIENPKDAPNTDGLDPESC 281
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I + S GDD +A+KSG PS + IR + +GSE SGG
Sbjct: 282 KDVLIAGTRFSVGDDCIAIKSGKLSVSQKLPMPSENLYIRNCLMEYGHGAVVIGSEMSGG 341
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYME 171
V+NV E+ GI +KT GRG G I I +++ ME
Sbjct: 342 VKNVHVENCVFKKTDRGIRIKTRRGRGKTGIIDEIHAANIKME 384
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 120/250 (48%), Gaps = 23/250 (9%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPD 68
RP LI+ S ++ + + + S FW +H Y V + VTI P+TDGID D
Sbjct: 163 RPRLIQIYKSDNVELQGLTLRRSGFWTVHICYSRKVTVDGVTIRNNIGGRGPSTDGIDVD 222
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SSS+V ++++ I DD + +K+G D G+ P+ + I VT +GI GSETS
Sbjct: 223 SSSDVLVQNADIECNDDAIVMKAGRDADGLRVNRPTENVVIHDVTVRDGAAGITFGSETS 282
Query: 129 GGVENVLAEHINLYNVG-VGIHVKTNIGRGGFIRNITVSDVYMENARKGI---------- 177
GG+ +V A I++ +GI K+ RGG + +I++ D+ M N
Sbjct: 283 GGIRHVEAYRIHVLAPSPIGILFKSAATRGGTVEDISIHDIDMRNVPTAFSVNFNWNPNY 342
Query: 178 ---KIAGDVGDHPD-----DKFNPNA--LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
KI + + PD + P A LP + I I ++ + Q+ + ++P
Sbjct: 343 SYAKIPQGLQNVPDYYKVMTQEVPRAQGLPHLKNIRISNIKASGSTQAFSVGAYADAPLQ 402
Query: 228 GICLSNINLQ 237
G+ NI++Q
Sbjct: 403 GVTFRNIDIQ 412
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 597 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 655
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 715
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 716 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 775
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 776 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 19/239 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F P I +N ++ I + S WN+ P YC NV+IR +T+ + + P DGID +
Sbjct: 202 FQPPRTIAPINCTNVFIEGITMNRSALWNVVPTYCENVIIRGITVNS-LEIPRGDGIDIE 260
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS NV IE ++T DD +KSG E G+ G P++ + IR ++ GI GSET+
Sbjct: 261 SSKNVLIEYCTLNTHDDCFTLKSGRGEEGVHIGRPTANVVIRHSLATNGPGGITCGSETA 320
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK--------IA 180
G ++N+ A GI KT RGG N+ + M + + K
Sbjct: 321 GNIKNIYAHDCVFKGTMTGILFKTRRPRGGGTENVLYERIRMIDVKDAFKWELLGSKRWV 380
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
G++ D + + PVV I ++D I + T IC+ + L+ V
Sbjct: 381 GELADRMPLRAINSLTPVVRNIHVRD----------FIVESSDRMITAICIPEVPLRNV 429
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD---SPNTDGIDP 67
RP L+ NS+++ IS V NSPFW H C + + + I +P +P+TDG+D
Sbjct: 672 RPRLLYVSNSKNVQISGVRLINSPFWTTHFYKCEQLRLLNLHITSPTSPVHAPSTDGVDI 731
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSG 92
D +NV I++ YIS DD +A+K G
Sbjct: 732 DVCTNVLIKNCYISVDDDGIALKGG 756
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGIDPD 68
RP I NS + + ++ + SPFWN+H Y ++V YV+ L D+ P+TDGID D
Sbjct: 150 RPRNILIYNSSQVTLRDLTLRRSPFWNVHICYSTDV---YVSGLVIKDNEGPSTDGIDVD 206
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS NV IE+ I DD + +K+G D G+ PS I +R + S +G+ +GSETS
Sbjct: 207 SSRNVLIENCNIECNDDNICIKAGRDADGLRVNRPSENIVVRNCSIGSG-AGVTIGSETS 265
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
G + NV I G +K+ + RGG I NI V D M N +
Sbjct: 266 GSIRNVEIYQIKANGTDGGFRIKSALTRGGVIENIRVHDFEMVNVLR 312
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 272 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 330
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 390
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 391 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 450
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 451 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 118/262 (45%), Gaps = 26/262 (9%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--------NT 62
R + N + + ++ + SP W +H +YC+ V + ++ I D N
Sbjct: 186 RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDEQGRRYEHIFNG 245
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DG++PDS+S+V I +S I++ DD +A+KSG +E G G PS I I T S F G+A
Sbjct: 246 DGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCTFKSGF-GVA 304
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA--------- 173
GSE SGGV NV +V +K GRG I N+TV D + N
Sbjct: 305 TGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRW 364
Query: 174 -RKGIKIAGDVGDHPD---DKFNP--NALPVVNGITIKD-VWGTKVQQSGLIQGLKNSPF 226
R I I H D DK V+ I +K+ V T + + GL SP
Sbjct: 365 FRGAINI-DQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPL 423
Query: 227 TGICLSNINLQGVAGPTSPPLK 248
I L N+N G G + +K
Sbjct: 424 QNIRLENVNALGKYGLKAYNIK 445
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 207 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 265
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 266 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 325
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 326 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 385
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 386 GELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 438
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 272 FYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 330
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 331 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 390
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 391 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 450
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 451 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 503
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 597 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 655
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 715
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 716 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 775
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 776 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 1/147 (0%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P I +N ++I+I + + +PFWN+ P+YC NV+IR +T+ + P DGID +SS
Sbjct: 226 PMFISPINCKNILIEGISLERTPFWNVVPIYCENVIIRGITVNS-VGIPRGDGIDIESSK 284
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
NV IE +S GDD +K+G E G+ P+ + +R GI VGSET+ +
Sbjct: 285 NVLIEYCTLSCGDDCFTMKAGRGEDGLRVNKPTENVVVRFCLAKEGHGGITVGSETAAKI 344
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGG 158
N+ + GVGI KT RGG
Sbjct: 345 NNLYVHDTVFDDTGVGIRFKTRRPRGG 371
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 175 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 233
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 234 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 293
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 294 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 353
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 354 GELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 406
>gi|218129054|ref|ZP_03457858.1| hypothetical protein BACEGG_00628 [Bacteroides eggerthii DSM 20697]
gi|217988689|gb|EEC55008.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 492
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 17/237 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N R+++I + + S WN+ P+YC NV+IR +T+ + + P+ DGID +
Sbjct: 175 FYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TEVPSGDGIDIE 233
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G + G+ G + + IR GI +GSET+
Sbjct: 234 SCKNVLIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHGHGGITIGSETA 293
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGG--------FIRNITVSDVY----MENARKG 176
G ++N+ GI KT RGG +R I V + + NA
Sbjct: 294 GMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKAFTWDLLGNAYYM 353
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
++A + D PN ++ IKD +Q G+ PF+ + N
Sbjct: 354 GELAARYPERAVDHLTPN----ISNTVIKDFIVESSKQFFTANGIPEIPFSNTLIEN 406
>gi|85058593|ref|YP_454295.1| hypothetical protein SG0615 [Sodalis glossinidius str. 'morsitans']
gi|84779113|dbj|BAE73890.1| hypothetical protein [Sodalis glossinidius str. 'morsitans']
Length = 199
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP L++F I + ++ QNSPFW H VY ++ ++ + I+ PAD+ NTD ID D
Sbjct: 66 FLRPPLLQFWKCSQIRLEDITLQNSPFWTCHTVYSRDITLKGIKIINPADAINTDAIDLD 125
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS N+ IE+ GDD V +KSG G+ P+ G+++ + + GIA+GSET+
Sbjct: 126 SSENILIEECLFDVGDDAVTLKSGSGADGLRINMPTRGVSVSQCKILASHGGIAIGSETA 185
Query: 129 GG 130
GG
Sbjct: 186 GG 187
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + + I++ + +NSP W +HP+ S + +T+ P DSPNTDGIDP+S
Sbjct: 221 RPRSLYLLECHDILVEGITIKNSPSWTVHPIRSSKLRFINLTLNNPKDSPNTDGIDPESC 280
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+ V I S GDD +A+KSG + PS I IR + +GSE SGG
Sbjct: 281 NGVEILGVKFSLGDDCIAIKSGKISIPLKERRPSENIIIRNCLMQYGHGAVVLGSEMSGG 340
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYME 171
V+NV E + G+ +KT GRG I I V ++ M+
Sbjct: 341 VKNVFVERCFFEDTDRGLRIKTRRGRGNTAIIDQIYVKNIQMK 383
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 597 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 655
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 715
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 716 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 775
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 776 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|386722797|ref|YP_006189123.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
gi|384089922|gb|AFH61358.1| hypothetical protein B2K_11610 [Paenibacillus mucilaginosus K02]
Length = 518
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 117/261 (44%), Gaps = 24/261 (9%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--------NT 62
R + N + + ++ + SP W +H +YC+ V + ++ I D N
Sbjct: 229 RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDEHGRRYEHIFNG 288
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DG++PDS+S+V I +S I++ DD +A+KSG +E G G PS I I T S F G+A
Sbjct: 289 DGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCTFKSGF-GVA 347
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA--------- 173
GSE SGGV NV +V +K GRG I N+TV D + N
Sbjct: 348 TGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRW 407
Query: 174 -RKGIKIAG--DVGDHPDDKFNP--NALPVVNGITIKD-VWGTKVQQSGLIQGLKNSPFT 227
R I I D DK V+ I +K+ V T + + GL SP
Sbjct: 408 FRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQ 467
Query: 228 GICLSNINLQGVAGPTSPPLK 248
I L N+N G G + +K
Sbjct: 468 NIRLENVNALGKYGLKAYNIK 488
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 597 FYRPKTISPINCTNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 655
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 656 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVIIRYSLAQHGHGGITCGSETA 715
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 716 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 775
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 776 GELAARYPARKVN-RLTPNVKNILIKDFIVESADQFFTANGIPEIPFNQVVIEN 828
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 9/233 (3%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N R+++I + + S WN+ P+YC NV+IR +T+ + + P+ DGID +
Sbjct: 175 FYRPKTISPINCRNVLIEGITMERSTLWNVVPIYCENVIIRGITVNS-TEVPSGDGIDIE 233
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S N+ IE ++ GDD +K+G + G+ G + + IR GI +GSET+
Sbjct: 234 SCKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRHSLAQHGHGGITIGSETA 293
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGG--------FIRNITVSDVYMENARKGIKIA 180
G ++N+ GI KT RGG +R I V + +
Sbjct: 294 GMIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSNHTIYERLRMINVGKAFTWDLLGNAYYM 353
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
G++ ++ + P ++ IKD +Q G+ PF+ + N
Sbjct: 354 GELAARYPERAVDHLTPNISNTVIKDFIVESSKQFFTANGIPEIPFSNTLIEN 406
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP I +N +++I + + S WN+ P+YC NV+IR +T+ + P+ DGID +
Sbjct: 258 FYRPKTISPINCTNVLIEGIAMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIE 316
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV IE ++ GDD +K+G E G+ G P+ + IR GI GSET+
Sbjct: 317 SCKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVIRYSLAQHGHGGITCGSETA 376
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIK---------I 179
G ++N+ GI KT RGG N + M N K +
Sbjct: 377 GVIKNLYVHDCVFDGTRTGIRFKTRRNRGGGSDNTYYERLRMINVGKAFTWDLLGSAYYM 436
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+P K N P V I IKD Q G+ PF + + N
Sbjct: 437 GELAARYPARKVN-RLTPDVKNILIKDFIVESADQFFTANGIPEIPFNQVVVEN 489
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 114 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 173
G + F+ + GS + +V+ + L N I +KT +GRGG+++NI M+
Sbjct: 935 GEARFTSLIYGSNLT----DVVITDVTLINTQSAIRIKTAVGRGGYVKNIFARRFTMKTM 990
Query: 174 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ + G HP F+P ALP ++ I +D+ V S ++G+KN PFTG+C+SN
Sbjct: 991 KYVFWMTGSYKLHPVGGFDPKALPEISNINYRDMTAENVTISAKLEGIKNDPFTGLCMSN 1050
Query: 234 INLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTGAC 276
+ + P C+DVSG +VKP PCS L T C
Sbjct: 1051 VTIALSPDPKKLQWNCTDVSGVTSRVKPEPCSLLPDKGTTMDC 1093
>gi|354594579|ref|ZP_09012618.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
gi|353672255|gb|EHD13955.1| hypothetical protein CIN_13140 [Commensalibacter intestini A911]
Length = 430
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LIEF + +++ + V+ N+P WN+ +V I + I P DSPNTDGID SS
Sbjct: 159 RPWLIEFNDVQNVHLKGVLLTNAPMWNVVIRSSQDVNIDTIKIQNPKDSPNTDGIDIVSS 218
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+ I D ISTGDD +++KSG + P+ ITI+ GI++GSET+ G
Sbjct: 219 QYIQISDVDISTGDDNISIKSGLQQ---GNALPARDITIKNSLMHDGH-GISIGSETANG 274
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG--DVGDHPD 188
+ V ++I+ GI +K+ RG I ITV + MEN I I V +
Sbjct: 275 IGKVTIQNIHFSGSTNGIRIKSQRDRGNSIGPITVDHIQMENVTNPIVINASYSVNSYKK 334
Query: 189 DKFNP--------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
F + P+++ I + D+ S ++ GL + I L +I +Q
Sbjct: 335 RSFKEALKQKELTSLTPLIHDILLSDIHVVNADNSIILSGLPEAFIWNIVLDHIFMQAKH 394
Query: 241 GPTSPPLKCSDVSGSAYQV 259
G LK V G +QV
Sbjct: 395 G-----LKARYVQGVMHQV 408
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P+ RP L+ + S+ +++ V F+NSP W +HP+ C ++ + V + P S N D +D
Sbjct: 233 PWLRPVLLNIVKSKKVLLEGVTFKNSPSWCLHPLSCEHITVNNVKVFNPWYSQNGDALDL 292
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+S N I +S GDD + +KSG D G G P + ++ G VGSE
Sbjct: 293 ESCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKNNIVLHGHGGFVVGSEM 352
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIR 161
SGGV+N+ VG+ K+ GRGG +
Sbjct: 353 SGGVKNIYVTDCTFMGTDVGLRFKSTRGRGGVVE 386
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+L+ F + ++++ V NSP ++I P C+NVVI +T+ P ++ N D ID S
Sbjct: 211 RPHLVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I ++ I GDD + +K+G G+ YG P + + I T + G +GSE SGG
Sbjct: 271 RQVLIINNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFVIGSEFSGG 329
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
++N++ G+ K+ + RGG NI +SD+YM + +
Sbjct: 330 MKNIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+L+ F + ++++ V NSP ++I P C+NVVI +T+ P ++ N D ID S
Sbjct: 211 RPHLVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I ++ I GDD + +K+G G+ YG P + + I T + G +GSE SGG
Sbjct: 271 RQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFVIGSEFSGG 329
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
++N++ G+ K+ + RGG NI +SD+YM + +
Sbjct: 330 MKNIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+L+ F + ++++ V NSP ++I P C+NVVI +T+ P ++ N D ID S
Sbjct: 211 RPHLVRFTDCENVLVKGVTLLNSPKFHIIPTRCTNVVIDGITVKCPWNAQNGDAIDISSC 270
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I ++ I GDD + +K+G G+ YG P + + I T + G +GSE SGG
Sbjct: 271 RQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-PVANVLIENNTVYNAHGGFVIGSEFSGG 329
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
++N++ G+ K+ + RGG NI +SD+YM + +
Sbjct: 330 MKNIVVRRNKFCGTDTGLRFKSAVKRGGKTENIFISDIYMTDIK 373
>gi|452958539|gb|EME63892.1| endopolygalacturonase [Amycolatopsis decaplanina DSM 44594]
Length = 453
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
R +E + +++I + +N FW +HP C NV I V A NTD DP+S
Sbjct: 203 RSTFVEPYSCDTVLIQGITLKNPMFWQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESC 262
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I +S++ DD +A+KSG D G G P I + + I GSE +GG
Sbjct: 263 DHVVIVNSHLGAHDDNIALKSGRDADGRRVGVPCRNIVVANCVMDGNWGAITCGSEQTGG 322
Query: 131 VENVLAEHINLY-NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
+ +V A + + G++VK+N RGGF N+ + V R + + D +
Sbjct: 323 IRDVYAYKLTVTGETKYGLYVKSNTLRGGFTENVNLDSVSGTFGRSVVYVLPDYNGQTGE 382
Query: 190 KFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVA 240
+P T+ + GT+ Q+ ++GL NS G+ + + GVA
Sbjct: 383 Y-----VPRFGPFTLGNSTGTRCGQAAFDVRGLPNSHVRGLRVRDCRFDGVA 429
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 3/164 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++ +++ + +NSP W +HPV + + +T+ P DSPNTDGIDP+S
Sbjct: 218 RPRSLYLVDCEDVVVEGITIKNSPSWTVHPVRSTKLRFINLTLNNPKDSPNTDGIDPESC 277
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+ V I S GDD +A+KSG + PS I IR G+ +GSE SGG
Sbjct: 278 NGVEIIGVKFSLGDDCIAIKSGKISVPVDMRRPSENIIIRNCLMEYGHGGVVLGSEMSGG 337
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
+++V E N G+ +KT GRG + ++Y++N +
Sbjct: 338 IKHVYVERCFFRNTDRGLRIKTRRGRGN---TAVIDEIYIKNIK 378
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 5/232 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F ++I++ + + SPFW IH C++ V+R++ + A N DGID + S
Sbjct: 190 RPHLIHFNRCKNILLEDFHIRQSPFWTIHLYLCNSGVVRHLDV--QAHGHNNDGIDLEMS 247
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +K+G ++ PS I +R + + + +GSE SGG
Sbjct: 248 RNFLIENCKFDQGDDAVVIKAGRNQDAWRLNTPSENIVVRDCDILNGHTLLGIGSEISGG 307
Query: 131 VENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V N+ NV +KTN RGGFI NI + D+ + + ++ DV D
Sbjct: 308 VRNIYMTRCKAPQNVHRLFFLKTNHRRGGFIENIYLEDIEAGDMLRTFEVDTDVLYQWKD 367
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ ++GI +K++ ++G P + + N+ + V
Sbjct: 368 LVPTYETRITRIDGIHVKNIHCQSADAIYELKGDARLPIRNVFVENVKVDTV 419
>gi|451341085|ref|ZP_21911561.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
gi|449416100|gb|EMD21877.1| Polygalacturonase [Amycolatopsis azurea DSM 43854]
Length = 451
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 106/233 (45%), Gaps = 9/233 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
R +E +++I V +N FW +HP C NV I V A NTD DP+S
Sbjct: 201 RSTFVEPYACDTVLIQGVTLKNPVFWQLHPTLCRNVTIDGVRTDASTAHSNTDACDPESC 260
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I +S++ DD +A+K+G D G G P I + + I GSE +GG
Sbjct: 261 DHVVIVNSHLGAHDDNIALKAGRDADGRRVGVPCRNIVVANCVMDGNWGAITCGSEQTGG 320
Query: 131 VENVLAEHINLY-NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
+ +V A + + ++VK+N RGGF N+ + V AR + PD
Sbjct: 321 ISDVYAYKLTVTGETKYALYVKSNTLRGGFTENVNLDRVSGTFARSFAYVL------PDY 374
Query: 190 KFNPNA-LPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVA 240
A +P TI D TK Q+ ++GL NS G+ +S+ GVA
Sbjct: 375 NGQTGAYVPRFGPFTISDSASTKCGQAAFDVRGLPNSHVRGLRVSDCRFDGVA 427
>gi|379720205|ref|YP_005312336.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
gi|378568877|gb|AFC29187.1| hypothetical protein PM3016_2299 [Paenibacillus mucilaginosus 3016]
Length = 518
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP--------NT 62
R + N + + ++ + SP W +H +YC+ V + +V I D N
Sbjct: 229 RGRAVCLRNVDGVYLKDITVRQSPAWCVHLIYCNGVSVNHVEIHTKKDERGRRYEHIFNG 288
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DG++PDS+S+V I +S I++ DD +A+KSG +E G G PS I I S F G+A
Sbjct: 289 DGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNIRISNCIFKSGF-GVA 347
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA--------- 173
GSE SGGV NV +V +K GRG I N+TV D + N
Sbjct: 348 TGSEMSGGVRNVRISDCRFEDVYSIATIKAPRGRGAVIENVTVEDCTLTNYSLEHEDCRW 407
Query: 174 -RKGIKIAG--DVGDHPDDKFNP--NALPVVNGITIKD-VWGTKVQQSGLIQGLKNSPFT 227
R I I D DK V+ I +K+ V T + + GL SP
Sbjct: 408 FRGAINIDQFYSHADFDADKVEEVDEGTSVIRNIHLKNIVLDTHAGNAVFMAGLPESPLQ 467
Query: 228 GICLSNINLQGVAGPTSPPLK 248
I L N+N G G + +K
Sbjct: 468 NIRLENVNALGKYGLKAYNIK 488
>gi|420263796|ref|ZP_14766432.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
gi|394769238|gb|EJF49101.1| exo-poly-alpha-D-galacturonosidase [Enterococcus sp. C1]
Length = 417
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 27/253 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I S+ + I ++ S FWN Y +++I +TI P+TDGID DS
Sbjct: 133 RPRNILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGITI-DNGKGPSTDGIDIDSC 191
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I+++YIS DD +++K+G +A ITI+ SGIA+GSETSGG
Sbjct: 192 EEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKDCQLGYG-SGIAIGSETSGG 250
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA----------------- 173
+E + + + G G +K+ RGGFIR +T SD+ M++
Sbjct: 251 IEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLLQTNWYPDYSYP 310
Query: 174 RKGIKIAGDVGDHPDDKFNPNALPV----VNGITIKDVWGTKVQQSG----LIQGLKNSP 225
A ++ D+ A+PV V ITI++V TK+ Q I+ P
Sbjct: 311 ELPADYAEEIPDYWHKLMAQPAIPVGPAKVCDITIENVQATKIGQQSVRAFFIEASPAEP 370
Query: 226 FTGICLSNINLQG 238
+ + N+++
Sbjct: 371 IRNLTMKNLSIHA 383
>gi|325568852|ref|ZP_08145145.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
gi|325157890|gb|EGC70046.1| exo-poly-alpha-D-galacturonosidase [Enterococcus casseliflavus ATCC
12755]
Length = 417
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 27/253 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I S+ + I ++ S FWN Y +++I +TI P+TDGID DS
Sbjct: 133 RPRNILVYESQQVTIKDISSVQSGFWNTQITYSHHILIDGITI-DNGKGPSTDGIDIDSC 191
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I+++YIS DD +++K+G +A ITI+ SGIA+GSETSGG
Sbjct: 192 EEVTIQNAYISCNDDNISIKAGRGAEALAQQRSCRKITIKDCQLGYG-SGIAIGSETSGG 250
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA----------------- 173
+E + + + G G +K+ RGGFIR +T SD+ M++
Sbjct: 251 IEEIKIQKVVFEQTGAGFRIKSANNRGGFIRKVTASDLTMKDVGFPFLLQTNWYPDYSYP 310
Query: 174 RKGIKIAGDVGDHPDDKFNPNALPV----VNGITIKDVWGTKVQQSG----LIQGLKNSP 225
A ++ D+ A+PV V ITI++V TK+ Q I+ P
Sbjct: 311 ELPADYAEEIPDYWHKLMAQPAIPVGPAKVCDITIENVQATKIGQQSVRAFFIEASPAEP 370
Query: 226 FTGICLSNINLQG 238
+ + N+++
Sbjct: 371 IRNLTMKNLSIHA 383
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 19/254 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+ N +++ IS + ++SP W + +Y N+V + + N DG DPDSS
Sbjct: 274 RPRLVNLSNCQNVWISGLTLKDSPSWILQMIYSDNIVTDHCAFHSEG-IWNGDGWDPDSS 332
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+N + S + TGDD VA+KSG + G A G PS+ I I S G+ +GSE SGG
Sbjct: 333 TNCTLFASELYTGDDSVAIKSGKNPEGNAIGRPSAHIYIFDCRVGSG-QGLCIGSEMSGG 391
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
VE+V +L N G+ +K RGG++R +TV D K ++ + DD
Sbjct: 392 VEDVQIWDCDLENSFSGLEIKATAKRGGYVRGVTVRDC------KAPRVMIHAVPYNDDG 445
Query: 191 FNPNALPVVN-----GITIKDVWGTKVQQSGLIQGLKNSPFTGI--CLSNINLQGVA--- 240
+ +PV+ G+T+ Q+ + ++ + F G L ++N G+
Sbjct: 446 EAADTVPVLEHFTFAGLTLTGRALNSKQEWKDVSPVELAGFEGPNGTLRDVNFDGLTITA 505
Query: 241 -GPTSPPLKCSDVS 253
P P CSDV+
Sbjct: 506 KAPRLPLQYCSDVT 519
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 8/228 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI+ S++I + V NSPFW IH + N++ R + A N DGIDP+ S
Sbjct: 204 RPQLIQLYQSKNITLEGVKIINSPFWCIHLLKSENIICR--RLRYDAKLVNNDGIDPEMS 261
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ IED + + GDD VA+KSG D G P+ I IR + +GSE S G
Sbjct: 262 RNILIEDIHFNNGDDNVAIKSGRDNDGWHDACPAENIVIRNCHFKG-LHAVVIGSEMSAG 320
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV E+ + G+ +KTN RGGF+ ++ V++ + + +
Sbjct: 321 VRNVFVENCDYAGYCKRGVFIKTNPDRGGFVSHLFVNNCKFDEVEDLFYVTSRYAGEGQE 380
Query: 190 KFNPNALPVVNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL 236
+ + + + + KV+ + L+ QG P + + I +
Sbjct: 381 SMH---FSTIEHLYVDGLSARKVRAAALVLQGTSAKPVQHVSFNAIEV 425
>gi|390436865|ref|ZP_10225403.1| polygalacturonase [Pantoea agglomerans IG1]
Length = 430
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + S + + + ++S FWN+H Y V ++ + ++ A P+TDGID DSS
Sbjct: 147 RPRNLVVYQSECVTLQDFTSKDSGFWNLHVCYSKQVNLQRLNVM-NATGPSTDGIDIDSS 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V +E +S DD + VKSG + I IR T SGI +GSETSGG
Sbjct: 206 QLVRVEGCTVSCNDDNICVKSGRGAEAQQLARTARDIIIRDCTLLKG-SGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
+ENV+ EH GVG +K+ RGG+I+NI V + ME+
Sbjct: 265 IENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIIVRHLIMED 306
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 93/168 (55%), Gaps = 9/168 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++ + I +V QNSPFW +HP C++V+I + +L P D N+DGIDPD
Sbjct: 143 YPRPTMVYVEHCNHISFHDVTLQNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPD 202
Query: 69 SSSNVCIEDSYISTGDDLVAVK--SGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
S+NV I ++ DD + +K +G +EYG P+ + I T +S + I +G+E
Sbjct: 203 HSTNVRIIGCHVQCADDCICLKTTAGNNEYG-----PTKNVIISNCTLTSTSAAIKIGTE 257
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
EN+L ++ + G+ ++ I GG +RN++ S++ +E R
Sbjct: 258 GVADFENILVDNCIITGTNRGLSIQ--IRDGGCVRNVSFSNIMIETRR 303
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 2 WRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
WR RT+ F+N ++++I + +NSP W IHP+ N+ + I P D+P
Sbjct: 221 WRPRTI---------FLNKCKNVLIEGITIKNSPSWTIHPLLSQNLKFINLNIENPKDAP 271
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG+DP+S +V I + S GDD +A+KSG S + IR
Sbjct: 272 NTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSENLYIRNCLMEYGHGA 331
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIK 178
+ +GSE SGGV+NV + GI +KT GRG G I I S++ M+
Sbjct: 332 VVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDEIHASNIKMDKVLTPFT 391
Query: 179 IAG----DVGDHPDDKFNPNALPV------VNGITIKDVWGTKVQ-QSGLIQGLKNSPFT 227
I D + ++ LPV + I +KD+ Q +G + GL
Sbjct: 392 INSFYFCDADGKTEYVWSKEKLPVDDRTPYIGNIYLKDITCNDTQVAAGYMYGLPERKIE 451
Query: 228 GICLSNINLQ 237
+ + NI ++
Sbjct: 452 KVTMENIYIK 461
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 117/284 (41%), Gaps = 20/284 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP ++ + I + +NSP W +HP + + + I PADSPNTDG+DP+S
Sbjct: 220 RPRMVFLERCKDITLQGFYLKNSPAWVLHPYFSQGLRFLDLDIENPADSPNTDGLDPESC 279
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I + S GDD +AVKSG G Y PS I IR+ + + VGSE G
Sbjct: 280 KDVEITGLHFSLGDDCIAVKSGKIYMGRRYKTPSENIEIRQCLMENGHGAVTVGSEVGAG 339
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
V+ V + G+ VKT GRG + +I+ + M++ + PD
Sbjct: 340 VKAVRVRDCLFRHTDRGLRVKTRRGRGKDSVLSDISFQHIVMDHVMTPFVVNSFYFCDPD 399
Query: 189 DKFN----PNALPV------VNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINL- 236
K ALP + ++ D+ + + GL I L N+++
Sbjct: 400 GKTEYVQCREALPADERTPEIQNLSFTDIKAANCHAAASFLCGLPEQKIRQIELRNVDIS 459
Query: 237 ------QGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 274
+GV CS + V C ++ + Q G
Sbjct: 460 FAEQAREGVPAMMEGVSACSRQGFTVMNVDTLVCENVTITGQKG 503
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 126/264 (47%), Gaps = 20/264 (7%)
Query: 2 WRQ-----RTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
WR+ L + RP L +S ++I NV F NSP W +HP C NV I VT++ P
Sbjct: 119 WRRFDEKAAELEYPRPYLCSIEHSEQVVIENVTFVNSPAWTLHPFDCENVAINNVTVVNP 178
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
+SPNTDG+DP+S N+ I + GDD +A+KSG ++ + I I
Sbjct: 179 KNSPNTDGLDPESCRNIRIANCCFDVGDDCIAIKSGTEDASQSIA--CENIIISGCNMVH 236
Query: 117 PFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 176
G+ GSE SG + NV + + GI KT GRGG I I+V+++ M+N
Sbjct: 237 GHGGVVFGSEMSGDIRNVTISNCVFQDTDRGIRFKTRRGRGGRISGISVNNIVMDNVLCP 296
Query: 177 IKIAGD--VGDHPDDKF--NPNALPV------VNGITIKDVWGTKVQQ-SGLIQGLKNSP 225
+ I G ++ + ALPV ++ ++ + T ++ +G I GL
Sbjct: 297 LIINSYYFCGKRGNEAYVWTKEALPVDERTPKLSNLSFSHLIATNIRSCAGFIYGLPEMA 356
Query: 226 FTGICLSN--INLQGVAGPTSPPL 247
+ + LS+ L + P +P +
Sbjct: 357 ISNVTLSDARFELSKDSQPEAPAM 380
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 2 WRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
WR RT+ F+N ++++I + +NSP W IHP+ N+ + I P D+P
Sbjct: 221 WRPRTI---------FLNKCKNVLIEGITIKNSPSWTIHPLLSQNLKFINLNIENPKDAP 271
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG+DP+S +V I + S GDD +A+KSG S + IR
Sbjct: 272 NTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSENLYIRNCLMEYGHGA 331
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIK 178
+ +GSE SGGV+NV + GI +KT GRG G I I S++ M+
Sbjct: 332 VVIGSEMSGGVKNVHVDRCVFRKTDRGIRIKTRRGRGSTGIIDEIHASNIKMDKVLTPFT 391
Query: 179 IAGDVGDHPDDK----FNPNALPV------VNGITIKDVWGTKVQ-QSGLIQGLKNSPFT 227
I D K ++ LPV + I +KD+ Q +G + GL
Sbjct: 392 INSFYFCDEDGKTEYVWSKEKLPVDDRTPYIGNIYLKDITCNDTQVAAGYMYGLPERKIE 451
Query: 228 GICLSNINLQ 237
+ + NI ++
Sbjct: 452 KVTMENIYIK 461
>gi|253688511|ref|YP_003017701.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251755089|gb|ACT13165.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 437
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 13/244 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LIEF N IS + +NSP WN+ ++ + TI P+DSPNTDGID SS
Sbjct: 166 RPWLIEFANVSQGKISGIGIENSPMWNLVIRDSHHIEVTNSTITNPSDSPNTDGIDIISS 225
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V + ISTGDD ++VKSG + A S ITI + S GI++GSET G
Sbjct: 226 RQVHLHHLNISTGDDNISVKSGLAKR--ADDAESRDITIDHIQ-SENGHGISIGSETING 282
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA---GDVGDHP 187
+ V + ++ G+ +K+ RG I + + +V M+ + + I G G +
Sbjct: 283 IGKVTLQDLHFTGTENGVRIKSGRDRGANIGPVIIRNVTMQQVKTPLVITDSYGGNGGYS 342
Query: 188 DDKFNP-------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVA 240
D +P P ++ +T++ + + +G+I GL +P I L ++++
Sbjct: 343 SDSVSPIKYQTLTTTTPNIHDVTLQHIEASGATHAGIISGLPEAPLKNIHLESVHITAKT 402
Query: 241 GPTS 244
G S
Sbjct: 403 GLQS 406
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP ++ + I +V QNSPFW +HP C++V+I + +L P D N+DGIDPD
Sbjct: 143 YPRPTMVYVEHCNHISFHDVTLQNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPD 202
Query: 69 SSSNVCIEDSYISTGDDLVAVK--SGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
S+NV I ++ DD + +K +G +EYG P+ + I T +S + I +G+E
Sbjct: 203 HSTNVRIIGCHVQCADDCICLKTTAGNNEYG-----PTKNVIISNCTLTSTSAAIKIGTE 257
Query: 127 TSGGVENVLAEH--INLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
EN+L ++ I N G+ I ++ GG +RN++ S++ +E R
Sbjct: 258 GVADFENILVDNCIITGSNRGLSIQIRD----GGCVRNVSFSNIMIETRR 303
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI+ + + + +NSPFW H VY VV+R +T+ + PN DG+D +SS
Sbjct: 210 RPPLIQVFGGKRVRLEGFTARNSPFWVNHLVYADEVVVRGITV--DSHFPNNDGVDVESS 267
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR--RVTGSSPFSGIAVGSETS 128
+ V IE+S TGDD V +KSG D G G PS+ + +R + G GIA+GSE S
Sbjct: 268 TRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVRGNDMGGE---DGIALGSEMS 324
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GGV +V L I K N+ RGG + + V ++ +E+
Sbjct: 325 GGVHDVFFTDNVLRKGLSAIRFKANLDRGGTVERVRVRNMTVED 368
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + + + + + NV QNSP W +HP Y ++ + I P+DSPNTDG+DP+S
Sbjct: 220 RPFAMYLVRCQKVRVQNVRVQNSPCWTVHPYYSDDLAFLNLYIHNPSDSPNTDGLDPESC 279
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV + + IS GDD +A+KSG + + + I IR + VGSE +GG
Sbjct: 280 KNVLVAGTTISVGDDCMAIKSGKFYMSMEHHKVTENIIIRNCRFERGHGSVTVGSEVAGG 339
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
V+NV G+ +KT GRG + D+ EN
Sbjct: 340 VKNVRVTQCIFDGTDRGLRIKTRRGRG---ERSVLDDILFEN 378
>gi|314949481|ref|ZP_07852816.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430834090|ref|ZP_19452099.1| glycosyl hydrolase [Enterococcus faecium E0679]
gi|313644095|gb|EFS08675.1| conserved domain protein [Enterococcus faecium TX0082]
gi|430485613|gb|ELA62513.1| glycosyl hydrolase [Enterococcus faecium E0679]
Length = 269
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Query: 28 VIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLV 87
+IFQ S FWN+ Y ++V++ V I+ D P+TDGID DSS+NV + + ++ GDD +
Sbjct: 1 MIFQKSGFWNLQITYSNDVLVEKV-IIRNNDGPSTDGIDIDSSTNVRVYECDLACGDDCI 59
Query: 88 AVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 147
A+KSG D G SS I + R S + G+ +GSE S GV +V I+ + G
Sbjct: 60 AIKSGRDGNGARVNRKSSRIEVARCKIRSGY-GVTIGSEVSAGVSDVYIHDIDFFQSDCG 118
Query: 148 IHVKTNIGRGGFIRNITVSDVYM 170
I +K++ RGG I NI V ++ M
Sbjct: 119 IRMKSSKERGGVIENIRVENLNM 141
>gi|129937|sp|P27644.1|PGLR_RHIRD RecName: Full=Polygalacturonase; AltName: Full=PGL; AltName:
Full=Pectinase
gi|142256|gb|AAA22102.1| PGL ORF [Agrobacterium tumefaciens]
Length = 312
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 30 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 89
+N+ W IHP C ++ TI+AP DSPNTDG +P+S NV I S GDD +AV
Sbjct: 40 IRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAV 99
Query: 90 KSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 147
K+G H + GIT+R G+ +GSE SGGV +V E ++ G
Sbjct: 100 KAGKRGPDGEDDHLAETRGITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRG 159
Query: 148 IHVKTNIGR-GGFIRNITVSDVYMENARKGIKIAG----DVGDHPD--DKFNP----NAL 196
+ +KT GG + NIT+ V ++ + + D H D NP +
Sbjct: 160 LRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGT 219
Query: 197 PVVNGITIKDVWGTKV-QQSGLIQGLKNSP 225
P V+GIT++DV + +G+ GL + P
Sbjct: 220 PFVDGITVEDVEIRNLAHAAGVFLGLPDVP 249
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 2 WRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
W + T R F+++ + +S + +NSP W +HPV C ++ +TI DSP
Sbjct: 210 WPKETRQGARRARTVFLSACEDVTLSGLTIRNSPSWTVHPVLCKGLIAADLTIENDPDSP 269
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSG 120
NTDG +P+SSS++ + +IS GDD +A+K+G P+ + I
Sbjct: 270 NTDGFNPESSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPTEHVRIENCLMERGHGA 329
Query: 121 IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
+ +GSE S G+ ++ + + G+ +KT GRGG + +I +SD ME+
Sbjct: 330 VVIGSEMSAGISDIAIRNCHFKGTDRGLRIKTRRGRGGLVADIRLSDSLMED 381
>gi|298383818|ref|ZP_06993379.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298263422|gb|EFI06285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 516
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 108/252 (42%), Gaps = 16/252 (6%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P + N ++++I V + S FWNI PVYC V+IR T+ + TDGID +S+
Sbjct: 213 PLFVSPTNCKNVLIEGVTLERSLFWNIVPVYCDGVIIRGATVDSHGHG-RTDGIDIESTR 271
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
NV IE + GDD +KSG E GI PS I IR + GI GSET+ +
Sbjct: 272 NVLIEYCSLDCGDDCFTMKSGRGEDGIRVNKPSENIVIRYCLAKRGWGGIVCGSETAAMI 331
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI--------KIAGDV 183
N+ G+ KT RGG N+T + M K GD+
Sbjct: 332 RNLYVHDCVFTGTKSGLRFKTRRSRGGGGENLTFERIRMNLTGAAFWWDMLGEEKHVGDL 391
Query: 184 GDH-PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
P P P ITI+D+ + G+ +P N ++ + G
Sbjct: 392 AKRLPARPITP-LTPSFKNITIRDIIVESASYFIDLNGIPETP-----AENNLIENLVGK 445
Query: 243 TSPPLKCSDVSG 254
T+ ++ +DV G
Sbjct: 446 TNKLIRMTDVKG 457
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 102/249 (40%), Gaps = 15/249 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I R I I V+ +NSP W IHP Y + + VTI P DSPNTDG DP+S
Sbjct: 223 RPRTIFLCRCRCIRIQGVLVRNSPSWTIHPYYTDGISLYNVTIWNPPDSPNTDGFDPESC 282
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V + IS GDD +A+KSG S +R + +GSE + G
Sbjct: 283 EDVLLLGCRISVGDDCIAIKSGKARMAGERRKASRNFALRNSILERGHGALTIGSEAAAG 342
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKI----AGDVG 184
V V A G+ +KT GRG F I + MEN D
Sbjct: 343 VYRVEASLCIFSGTDRGLRLKTRRGRGPDCFYDEIYFHHIRMENVPMPFTFNMFYHCDAD 402
Query: 185 DHPDDKFNPNALPVVNGIT--IKDVWGTKVQQSGL------IQGLKNSPFTGICLSNINL 236
H + ALP VN +T I V ++ SG+ GL P I L I+
Sbjct: 403 GHERYVQSQEALP-VNAMTPGIGAVRAENIRCSGVDSALLCAYGLPERPIGAILLRGIDA 461
Query: 237 QGVAGPTSP 245
+ P P
Sbjct: 462 VFLEDPERP 470
>gi|225442916|ref|XP_002265133.1| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 374
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 20/266 (7%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
W+Q F RP ++F +++ + NS +I C +I + ++AP DSPN
Sbjct: 116 WQQHDSDF-RPAALKFYECPGMVLKGLTHLNSQKQHIVITKCHGALISKIKVIAPEDSPN 174
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGI+ SS NV ++ S+ISTGDD +A+ +G SS I I+ +T +P GI
Sbjct: 175 TDGINIASSKNVRVQRSHISTGDDCIAISAG-----------SSNIKIKGMT-CAPSHGI 222
Query: 122 AVGSETSGG-----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKG 176
++G+ G VE V G+G+ +KT G G +RNI+ ++ ++
Sbjct: 223 SIGALGDPGKPDESVEKVDVSDCTFKGPGIGVRIKTWQGGRGRVRNISYKNIEVQEVGTP 282
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNIN 235
I I K N +A+ V + ++ + GT + + + +N+ T I L NIN
Sbjct: 283 IVIDQFYCPRGGCKNNSDAVRVSD-VSYSGIRGTYTRDDAMSLLCSQNAACTNIVLDNIN 341
Query: 236 LQGVAGPTSPPLKCSDVSGSAYQVKP 261
L+ + + +KC +V G + VKP
Sbjct: 342 LRTMDPKKAAKVKCFNVKGRSQDVKP 367
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 3/159 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI R++++ + + SPFW IH C ++R + + A+ N DGID + S
Sbjct: 207 RPHLIHLNRCRNVLLEDFSIRESPFWTIHLYMCKGGIVRRLDV--KANGHNNDGIDLEMS 264
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+ IE+ GDD V +KSG + PS I IR + + + +GSE SGG
Sbjct: 265 RDFLIENCTFDQGDDAVVIKSGRNRDAWRLDTPSENIVIRNCKILAGHTLLGIGSELSGG 324
Query: 131 VENVLAEHIN-LYNVGVGIHVKTNIGRGGFIRNITVSDV 168
+ N+ H + L +V +KTN RGGF+ NI + D+
Sbjct: 325 IRNIFMHHCDVLGSVRCLFFIKTNCRRGGFVENIHLEDI 363
>gi|300728596|ref|ZP_07061954.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774165|gb|EFI70799.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 453
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 12/242 (4%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q P +NSR++++ V + S FWNI PVYC N++IR VT+ + + TD
Sbjct: 197 QEKAEICLPTFFGPVNSRNVLLEGVTLERSVFWNIVPVYCENIIIRDVTVNSFGHA-RTD 255
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GID DSS N +E + + GDD +KSG G+ P+ I IR + G +
Sbjct: 256 GIDFDSSRNGLVEYTTLDCGDDCFTLKSGRGMDGVKRNRPTENIVIRHCKVVNAAGGFTI 315
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
GSET+ + NV I + + ++ K+ RGG N+ + +++ + K I D+
Sbjct: 316 GSETAAMIRNVYVYDIEMEHPRFALYFKSRRPRGGGAENVWMENIHAKQT-KYTAIKWDL 374
Query: 184 GDHPD------DKF---NPNAL-PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
P+ ++F PNAL P I K++ + + GL P + N
Sbjct: 375 LGSPEYVGKLAERFAVKEPNALTPKFRNIHFKNISIDQCPTLIKMVGLPEQPIEQVTYEN 434
Query: 234 IN 235
+
Sbjct: 435 VK 436
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 5/232 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F + +++ + SPFW IH C++ V+R + + A N DGID + S
Sbjct: 204 RPHLIHFNRCKHVLLDGFKIRQSPFWTIHLYMCNSGVVRNLDV--QAHGHNNDGIDFEMS 261
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +E GDD V +KSG ++ P I +R + +GSE SGG
Sbjct: 262 RNFLVEHCTFDQGDDAVVIKSGRNQDAWRLNTPCENIVVRHCAIRKGHVLLGIGSEMSGG 321
Query: 131 VENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V N+ + +V +KTN RGGFI NI + ++ + + +I DV D
Sbjct: 322 VRNIYMHDCTVPESVQRLFFLKTNHRRGGFIENIYLENIEAGDMLRAFEIDTDVLYQWKD 381
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
L + GI +K+V ++G K P + + N+ + +
Sbjct: 382 LVPTYERKLTRIKGIYMKNVHCKSADAIYELKGEKEEPIRDVFIENVKVDTI 433
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 5/172 (2%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
++R +P RP L+ F + I + + N+ W IHP + S + + I AP DSPNT
Sbjct: 209 KERNIP--RPRLLFFNRCKLITVHGITVCNAASWQIHPYFSSYLHFLDLDITAPKDSPNT 266
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
D +DP++ NV I S GDD +A+KSG + G + P+ IR +
Sbjct: 267 DALDPEACDNVWISGCRFSVGDDCIAIKSGKIDIGRKFKQPAENHNIRNCLMQFGHGAVT 326
Query: 123 VGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
+GSE +GGV N+ E + G+ +KT GRG ++ + V E +
Sbjct: 327 LGSEMAGGVRNLTVERCIFDHTDRGLRIKTRRGRG---KDAVIDGVLFEKMK 375
>gi|390956451|ref|YP_006420208.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390411369|gb|AFL86873.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 423
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS-PNTDGIDP 67
+ RP L++ S+ + ++ QNSP +N+ +C + I + I PA + PNTDGIDP
Sbjct: 154 YPRPMLVDITESQHLTFDHITLQNSPMYNLTFFFCDGIKIDHTIIRNPAKTGPNTDGIDP 213
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS---GIAVG 124
SS N+ I I TGDD +A+KSG E G P + I S F G++VG
Sbjct: 214 FSSKNIEISYVDIDTGDDDIALKSGLVERDPKIG-PVEHVYIH----DSIFRHGHGLSVG 268
Query: 125 SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI----- 179
SE +GG+ +V E+I + N G+ +K+N RG I ++ ++ M + I+I
Sbjct: 269 SELAGGISDVRVENIVMENTDAGVRIKSNRTRGNDIHDLHYKNIQMTGVGQPIQITEYYP 328
Query: 180 ----AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
AG D P + I+++++ T + + +I G+ P + L+ I+
Sbjct: 329 KWPAAGTDTAKAVDAHTPR----FHDISLENITATGAKDA-IIIGIPEYPIQNLTLTKIS 383
Query: 236 LQGVAGPTSPPLKCSDVSGSAYQVKP 261
+ G G ++ ++V+ VKP
Sbjct: 384 ISGEKGLQ---IRNAEVTMQDVVVKP 406
>gi|238794982|ref|ZP_04638578.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
gi|238725685|gb|EEQ17243.1| Endopolygalacturonase [Yersinia intermedia ATCC 29909]
Length = 442
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + S + +S + S FWNIH Y ++ + ++ + + P+TDGID DSS
Sbjct: 159 RPRNLVVYRSEQVEMSGFTSRESGFWNIHLCYSQHLYLHHLQV-ENSGGPSTDGIDIDSS 217
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V +E +S DD + VK+G G + I IR SGI +GSETSGG
Sbjct: 218 QQVRVEHCRVSCNDDNICVKAGRGAEAERIGATARDIVIRECELLHG-SGITLGSETSGG 276
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
+E VL E+I GVG +K+ RGGFIR++ VS + M +
Sbjct: 277 IEQVLIENITFSGTGVGFRIKSARNRGGFIRHVRVSGLQMTD 318
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGIDPD 68
RP L++ NS I +S ++ + S FW +H Y ++ + VTI D P+TDGID D
Sbjct: 173 RPRLVQIFNSDHIKLSGLMLKRSGFWTVHICYSHDIEVDGVTIRNNEDGKGPSTDGIDID 232
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS + ++ + IS DD + +K+G D G+ P+ + ++ + +G+ GSETS
Sbjct: 233 SSKKILVQHADISVNDDALCLKAGRDSDGLRVNRPTEDVVLKDSVVRAGAAGVTFGSETS 292
Query: 129 GGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GG NV A I + V VGI K+ RGG+ +I + D+ +++ I++
Sbjct: 293 GGFRNVEAYGITVLKPVPVGILFKSAHTRGGWAEDIRIHDMDLKDVAVAIRV 344
>gi|345301605|ref|YP_004821553.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
gi|345095542|gb|AEN67177.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 447
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 22/261 (8%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LIEF + + IS + NSP WN+ N+ + +I P DSPNTDGID SS
Sbjct: 175 RPWLIEFDHVQGGNISQLHIINSPMWNLVLRNSENIDVSRSSIFNPPDSPNTDGIDVVSS 234
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ + +STGDD +A+KSG G A PSS I I + G++VGSET+ G
Sbjct: 235 KNISLRHLKLSTGDDDIAIKSGLASTGKAP--PSSNINIDDIDIYRGH-GLSVGSETANG 291
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
+ V +++ G+ +K+ RG I I+ ++ M + + I G +
Sbjct: 292 IGRVTMQNVRFNGTDNGLRIKSGRDRGNQIGPISADNITMNHVNVPLVITDSYGG--NGG 349
Query: 191 FNPNAL------------PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQG 238
++ +L P ++ +TI+ + T +G+I GL +P I L +I++
Sbjct: 350 YSSKSLTSIPTSAISSLTPFIHDVTIQHLTATNSGMAGIISGLPEAPLQNITLKDIHIDA 409
Query: 239 VAGPTSPPLKCSDVSGSAYQV 259
G L+ VSG V
Sbjct: 410 THG-----LQSRYVSGEIKNV 425
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 120/253 (47%), Gaps = 15/253 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I + R + +S + +NSP W IHPV C +V+ +TI SPNTDG++P++S
Sbjct: 220 RPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEHVLAVGLTIRNDPLSPNTDGLNPEAS 279
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
S++ + IS GDD +A+K+G + P+ + IR + +GSE S G
Sbjct: 280 SDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTRRVEIRNCLMQLGHGAVVMGSEMSRG 339
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG----DVGDH 186
+ +V + G+ +KT GRGG + +I +S M+ I + D
Sbjct: 340 IHDVSISRCHFVGTDRGLRIKTRRGRGGAVSDIHLSQCRMDGVATPIAVNAFYFCDADGR 399
Query: 187 PDDKFNPNALPV------VNGITIKDVWGTKVQQSGLI-QGLKNSPFTGICLSNINL--- 236
+ + N LP+ ++ ITI+DV + + + + GL + + +++
Sbjct: 400 SEYVQSRNPLPLSIETPRISNITIRDVVVSGAETAAAVFYGLPECEIDAVSVDGLSIVYG 459
Query: 237 QGVAGPTSPPLKC 249
+G A P P + C
Sbjct: 460 EG-AKPGLPEMAC 471
>gi|372276037|ref|ZP_09512073.1| polygalacturonase [Pantoea sp. SL1_M5]
Length = 430
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + S + + + ++S FWN+H Y V ++ + ++ A +TDGID DSS
Sbjct: 147 RPRNLVVYQSECVTLQDFTSKDSGFWNLHVCYSKQVNLQRLNVM-NATGTSTDGIDIDSS 205
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V +E +S DD + VKSG + I IR T SGI +GSETSGG
Sbjct: 206 QLVRVEGCTVSCNDDNICVKSGRGAEAQQLARTARDIIIRDCTLLKG-SGITLGSETSGG 264
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
+ENV+ EH GVG +K+ RGG+I+NI V + ME+
Sbjct: 265 IENVIIEHNRFSGTGVGFRIKSARNRGGWIKNIIVRHLIMED 306
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 109/242 (45%), Gaps = 15/242 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP IEF N I + NSP WNI +++ ++ V I P SPNTDG+D SS
Sbjct: 520 RPWFIEFNNVSHSKIEQLHLTNSPMWNIVIRNSADITVQNVRITNPVSSPNTDGMDIVSS 579
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ + + I TGDD +A+KSG A S ITI GI+VGSET+ G
Sbjct: 580 RNITVSNMDIHTGDDNIAIKSGLVNGTAA---ASKDITIEDSVMRDGH-GISVGSETANG 635
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI----AGDVGDH 186
+ V H+ N G+ +K+ RG I + S + M N + + +G G
Sbjct: 636 IGKVTINHVTFLNTENGVRIKSARDRGENIGPLIASHLTMTNVVTPVLVTNSYSGQAGAQ 695
Query: 187 PDDKFNP-------NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
P + P + GI I D+ TK + + GL SP + L+NI +
Sbjct: 696 GHTLTQPIETAAVTASTPKMKGIHISDLMATKASYAMIFSGLPESPVEDVTLNNIRIDAQ 755
Query: 240 AG 241
G
Sbjct: 756 YG 757
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI R++++ + SPFW IH C ++R + + A+ N DGID + S
Sbjct: 206 RPHLIHLNRCRNVLLDGFKIRESPFWTIHLYMCKGGIVRGLDV--KANGHNNDGIDLEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +KSG + G P I +R + + +GSE SGG
Sbjct: 264 RNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQVMEGHTLLGIGSELSGG 323
Query: 131 VENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV H ++ +V +KTN RGG + NI + DV ++ + + D+ +
Sbjct: 324 VRNVYMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDILYQWRE 383
Query: 190 KF--NPNALPVVNGITIKDV 207
L + GI +KD+
Sbjct: 384 LVPTYEERLTRIEGIHVKDI 403
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI R++++ + SPFW IH C ++R + + A+ N DGID + S
Sbjct: 206 RPHLIHLNRCRNVLLDGFKIRESPFWTIHLYMCKGGIVRGLDV--KANGHNNDGIDLEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +KSG + G P I +R + + +GSE SGG
Sbjct: 264 RNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQVMEGHTLLGIGSELSGG 323
Query: 131 VENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV H ++ +V +KTN RGG + NI + DV ++ + + D+ +
Sbjct: 324 VRNVYMHHCDVPASVHCLFFIKTNRRRGGIVENIYLEDVTCKDTEYLVGLDMDILYQWRE 383
Query: 190 KF--NPNALPVVNGITIKDV 207
L + GI +KD+
Sbjct: 384 LVPTYEERLTRIEGIHVKDI 403
>gi|315570526|gb|ADU33267.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 404
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 16/249 (6%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPAD--- 58
W++ P TRP ++ R + + N+ ++SP +N++ C +V IR + I PA+
Sbjct: 137 WKRMPPPSTRPVFLQIFWVRYLTLENITVKSSPMFNVNLKNCDDVTIRGIKIRNPANYVD 196
Query: 59 -SPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSP 117
PNTDGI+ +S V I ISTGDD +A+ + P+ + I +
Sbjct: 197 PGPNTDGINVNSCRRVHITGVNISTGDDCIALDANGKG---KTKTPTEDVLIEDSHMYAG 253
Query: 118 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-G 176
G+++GS TSGG+ NV + G+ +K+ GRGG + +I ++ M + RK G
Sbjct: 254 HGGVSIGSVTSGGLRNVTVRNCIFNGTNRGLFIKSRRGRGGLVEDIHYHNIQMVDLRKEG 313
Query: 177 IKIAG-----DVGDHPDDKF-NP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 228
I IA D G D + P P + + K++ G V I GL SP
Sbjct: 314 IAIAAIYNGSDPGLRSRDFYWEPVNETTPFIRNVEFKNIHGDSVLNPIFIVGLPESPIEN 373
Query: 229 ICLSNINLQ 237
+ +N+ ++
Sbjct: 374 VTFTNVKIE 382
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + +I + + +NSP W IHP + +++ + +LAP DS NTDG+DP+S
Sbjct: 221 RPRAVFLNGCENISLVGLTVKNSPSWTIHPYFSNHLRFLGLNVLAPKDSHNTDGLDPESC 280
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V + + S GDD +AVKSG G Y PS ITIR+ + + + +GSE G
Sbjct: 281 RQVELAGIHFSVGDDCIAVKSGKIYMGKTYRTPSEHITIRQCSMNDGHGSVVIGSEIGAG 340
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
V ++ + G+ +KT GRG + V V EN R
Sbjct: 341 VRDLTVRDCIFKDTDRGLRIKTRRGRG---EDCVVDRVAFENIR 381
>gi|424887243|ref|ZP_18310848.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175015|gb|EJC75058.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 472
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 21/228 (9%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P LIE +++ I V +NSP +++ + V I PADS NTDGIDP +S
Sbjct: 194 PRLIEVDHAKEISFYKVKLRNSPNFHVVLNHVEGATFWGVQIDTPADSRNTDGIDPGASQ 253
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGSETSGG 130
++ I S+I TGDD +A+K+G P+S ++I V + G+++GSET G
Sbjct: 254 DITIAHSFIRTGDDNIALKAG--------NGPTSHVSI--VDDHLYWGHGLSIGSETVAG 303
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V ++L + L G+ +K++I RGG + N+ +V + RK I D H D+K
Sbjct: 304 VSDILVRDVTLDGTTSGLRIKSDISRGGTVSNVRYENVCLRGNRKPI----DFDTHYDEK 359
Query: 191 FNPNALPVVNGITIKDVWGTKVQQSG--LIQGLKNSPFTGICLSNINL 236
++P+ + I + DV G +SG +I+G + G+ +
Sbjct: 360 ARGGSIPIYHDIVLHDVVG----ESGTLVIRGQDEAHALGVQFDGVRF 403
>gi|424896488|ref|ZP_18320062.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393180715|gb|EJC80754.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 503
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P LIE +++ I V +NSP +++ + V I PADS NTDGIDP +S
Sbjct: 194 PRLIEVDHAKEISFYKVKLRNSPNFHVVLNHVEGATFWGVQIDTPADSRNTDGIDPGASQ 253
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF-SGIAVGSETSGG 130
++ I S+I TGDD +A+K+G P+S ++I V + G+++GSET G
Sbjct: 254 DITIAHSFIRTGDDNIALKAG--------NGPTSHVSI--VDDHLYWGHGLSIGSETVAG 303
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDK 190
V ++L + L G+ +K++I RGG + N+ +V + RK I D H D+K
Sbjct: 304 VSDILVRDVTLDGATSGLRIKSDISRGGTVSNVRYENVCLRGNRKPI----DFDTHYDEK 359
Query: 191 FNPNALPVVNGITIKDVWG 209
++P+ I + DV G
Sbjct: 360 ARGGSIPIYRDIVLHDVVG 378
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 29/257 (11%)
Query: 11 RPNLIEFMNSRSIIISN------VIFQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNT 62
RP LI+ NS I + N + S FW + VY +V + +T+ D P+T
Sbjct: 181 RPRLIQIYNSSRIELGNGPMAEPLQLARSGFWTVQIVYSHDVKVSGITVRNNIDGKGPST 240
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DG+D DSS + +E + I DD + +K+G D G+ P+ + IR T + ++G+
Sbjct: 241 DGVDIDSSHTILVEHADIDANDDALCLKAGRDADGLRVNRPTENVVIRNSTIRAAYAGVT 300
Query: 123 VGSETSGGVENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-- 179
GSETSGG+ NV + + V GI K+ RGG +I +SD+ + A GI+I
Sbjct: 301 FGSETSGGIRNVRVHDLRVIGPVRYGILFKSAATRGGGASDIDISDIDVAQAETGIRINL 360
Query: 180 ----AGDVGDHPDDKF--------------NPNALPVVNGITIKDVWGTKVQQSGLIQGL 221
A P+ LP V+ I I+ V ++ + ++
Sbjct: 361 NWFPAYSYAKIPEGLTAYPAYWATLTAPVPRSKGLPQVHNIRIRRVTAKGLKTAVDLEAY 420
Query: 222 KNSPFTGICLSNINLQG 238
+ P + I + ++ L+
Sbjct: 421 ADVPLSNIQIEDVTLEA 437
>gi|326528133|dbj|BAJ89118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 414
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 122/271 (45%), Gaps = 22/271 (8%)
Query: 3 RQRTLPF-TRP--NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
R+ T P TRP + F R + + V QN P +++ C +V ++ ++APADS
Sbjct: 151 RKNTQPCNTRPPPRAVHFEECRGVSVQGVTLQNGPQFHLSFTRCVDVKANFLRVVAPADS 210
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
PNTDGI + SS V I D+ ISTGDD V++ S + +R ++ P
Sbjct: 211 PNTDGIHLNDSSRVQIMDNLISTGDDCVSMVGN-----------CSDVRVRDIS-CGPGH 258
Query: 120 GIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
GI++GS T+ VENV + L N G+ +K+ G G R++ + M+N
Sbjct: 259 GISIGSLGKNRTTDRVENVRVDTCLLTNTTNGVRIKSWQGGTGSARDLRFEGIVMKNVSN 318
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNI 234
I I D P N V + DV GT + ++ P T + L N+
Sbjct: 319 PIIIDQYYCDQPTPCANQTEAVEVRKVEFVDVRGTSATAQAIRIACSDAVPCTELELRNV 378
Query: 235 NLQGVAGPTSPPLKCSDVSGSAYQ-VKPWPC 264
NL V G + C SG A V PW C
Sbjct: 379 NLT-VVGGGAATASCYRASGKAAGVVVPWSC 408
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + F ++ IS++ S FWN YC + + ++T+ + P+TDGID DSS
Sbjct: 153 RPREVLFYRCKNCAISDLTLMRSGFWNCQLTYCQQMEVSHLTV-KENNGPSTDGIDIDSS 211
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
S V + + +S GDD + VKSG D G+ P++ I I S + G+ +GSE S G
Sbjct: 212 SYVRVHNCELSCGDDCIVVKSGRDGDGLRVNQPAAHIEIDHCIIHSGY-GVTLGSEVSAG 270
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
+ +V + N G +K++ RGG I+N+ + M N +
Sbjct: 271 ISDVHIHDMIFENTDCGFRMKSSADRGGVIKNVVAEHLEMHNVQ 314
>gi|300770985|ref|ZP_07080862.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762258|gb|EFK59077.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 481
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 37/289 (12%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVI--RYVTILAPADSPNTDGIDPD 68
RP + S III +V + + FW +H +Y S V + + P+TDGID D
Sbjct: 192 RPRTVIVDGSEDIIIRDVTLKQAGFWTVHLLYSSYVTVDGIIIKNNINGIGPSTDGIDID 251
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS + I+++ I DD +KSG D G+ P+ + I I GSETS
Sbjct: 252 SSKWIRIQNADIDCNDDNFCIKSGRDWDGLRVNRPTEYVLITDCISRKGDGLITFGSETS 311
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA-------- 180
GG+ +++A ++ + VGI +K+ RGG + +I + ++ M++ R ++
Sbjct: 312 GGMRHIIARNLKAHGTKVGIRLKSARNRGGVVEDILLENIQMDSVRTAFEVTPNWNPSYS 371
Query: 181 ----------GDVGDHPDDKFNP-----NALPVVNGITIKDVWGTKVQQSGLIQGLKNSP 225
V +H P +P I IK+V+ Q++ + GL+ +P
Sbjct: 372 YSKLPAGYDINKVPEHWKKMVTPVEPASKGIPTFQNIQIKNVFVKFAQRAINVDGLQENP 431
Query: 226 FTGICLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQTG 274
L N+ + + +G K W + + Q G
Sbjct: 432 LQKFSLENVAI------------TAKTAGVIRHAKNWQLKNVKVTAQDG 468
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI F + + + + QN+ W +HP + + + +++ AP DSPNTD +DP++
Sbjct: 215 RPRLIFFNRCKLVTVHGITAQNAASWQLHPYFSTELQFLDLSVNAPKDSPNTDALDPEAC 274
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
V I S GDD +A+KSG E G + P++ TIR I +GSE +GG
Sbjct: 275 DTVNIVGCRFSVGDDCIAIKSGKIEIGRKFKQPANRHTIRNCIMQFGHGAITLGSEMAGG 334
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYME 171
V+N+ G+ +KT GRG I I ++ M+
Sbjct: 335 VKNLSVSRCIFKETDRGLRIKTRRGRGKDAVIDGIEFKNIKMD 377
>gi|390959335|ref|YP_006423092.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
gi|390414253|gb|AFL89757.1| endopolygalacturonase [Terriglobus roseus DSM 18391]
Length = 468
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPD 68
RP LI+ +S ++ + + S FW +H Y +V I +VTI P+TDGID D
Sbjct: 158 RPRLIQVFDSSNVKLDGPMLTRSGFWTVHICYSHDVTIDHVTIRNNEGGKGPSTDGIDID 217
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS +V ++ + I DD + +K+G D G+ P+ + +R + + + GSETS
Sbjct: 218 SSHDVLVQHADIDVNDDALCLKAGRDSDGLRVNRPTYNVVLRDSLIRTGAAAVTFGSETS 277
Query: 129 GGVENVLAEHIN-LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GG N+ A ++ L V G+ +K+ RGGF N+ V D++++ + IK+
Sbjct: 278 GGFRNIEAYNLTALRGVTNGVLIKSAKVRGGFGENLRVHDLHLDGVKTPIKV 329
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 55/67 (82%)
Query: 1 MWRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
+WR RTL TR +LIE +NS +++IS+V NSPFW +HPVYCSNVV++ +TILAP D+P
Sbjct: 214 LWRNRTLNHTRGHLIELVNSTNVLISSVTLSNSPFWTVHPVYCSNVVMKDLTILAPLDAP 273
Query: 61 NTDGIDP 67
NTDGIDP
Sbjct: 274 NTDGIDP 280
>gi|423312659|ref|ZP_17290596.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
gi|392687393|gb|EIY80686.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
Length = 849
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 101/233 (43%), Gaps = 11/233 (4%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P +N +++ + V F+ +WNI P YC ++VIR +T+ + TDGID DSS+
Sbjct: 193 PKTFAPINCKNVFVEGVTFERGLYWNIVPQYCEHIVIRGITVNSFGHG-RTDGIDIDSSN 251
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
+V IE + DD +KSG E G+ P+S + IR+ GI G+E +GGV
Sbjct: 252 DVLIEYCSLDCQDDCYTMKSGRGEDGLKVNRPTSNVVIRKSIALRGAGGIVCGTEIAGGV 311
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI--------KIAGDV 183
NV KT RGGF+ NI V V R+ + + G++
Sbjct: 312 RNVYMHDCVFEGTDQAFRFKTRRPRGGFVENIYVERVRANVKRQALYCDMLGSARWVGEL 371
Query: 184 GD-HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+P + P P I+I DV T + L P N+
Sbjct: 372 AQRYPAREITP-LTPWFANISIHDVEITGCSTLVDVAALPEKPVKNFFFGNVK 423
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 3/165 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPD 68
RP LI+ NS + +S ++ + S FW +H Y +V + +TI P+TDGID D
Sbjct: 170 RPRLIQVFNSSQVKLSGLMLRRSGFWTVHICYSHDVTLDGLTIRNNEGGRGPSTDGIDID 229
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS V ++ + I+ DD + +K+G D G+ P+ I +R +G+ +GSETS
Sbjct: 230 SSKKVLVQHADIAVNDDALCLKAGRDSDGLRVNRPTEDIVLRDSVIRDGAAGVTIGSETS 289
Query: 129 GGVENVLAEHIN-LYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
GG N+ A + L V VGI K+ RGG+ N+ D+ M +
Sbjct: 290 GGFRNIEAYGLTVLKQVPVGILFKSARTRGGWGENLRFHDITMTD 334
>gi|423223575|ref|ZP_17210044.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638200|gb|EIY32047.1| hypothetical protein HMPREF1062_02230 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 532
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 23/254 (9%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
L RP ++ F+ +++ V+FQNSP ++++ + N+V+ + + P ++ N DGID
Sbjct: 201 LAKKRPRMVRFVRCERVLLQGVVFQNSPSFHVNFILSDNIVVDGIMVRCPWNAQNGDGID 260
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
S +N I + + GDD + +KSG + G G P + I I T G +GS+
Sbjct: 261 LSSCTNALIVNCAVDAGDDAICLKSGIGDVGRRRG-PCANIIIDNCTVFHGHGGFVIGSD 319
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR------------ 174
T GG++ V + + G+ K+ GRGG + N+ V ++ M +
Sbjct: 320 TGGGIDRVSVRNCRFIDTDTGLRFKSKRGRGGVVSNVYVDNIMMNDIANYAIWFDSYYQE 379
Query: 175 -----KGIKIAGDVGDHPDDKFNP--NALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFT 227
GI G++ D P F P + P I I ++ ++ GL +
Sbjct: 380 KTPEPDGIPEGGEMTDVP---FMPVTDDTPCFQDIHISNITCRDAGRAMFFNGLPEMNVS 436
Query: 228 GICLSNINLQGVAG 241
+ L++ + VAG
Sbjct: 437 NVSLTDCMIHSVAG 450
>gi|300789895|ref|YP_003770186.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|384153411|ref|YP_005536227.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|399541775|ref|YP_006554437.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|299799409|gb|ADJ49784.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|340531565|gb|AEK46770.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|398322545|gb|AFO81492.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
Length = 457
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 8/243 (3%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
R +E +++I + +NS FW +HP C NV + V+ NTDG DP+S
Sbjct: 207 RSAFVEPYACENVLIQGITLKNSMFWQLHPTLCRNVTVDGVSTDPSTAHSNTDGCDPESC 266
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+V I + + DD +A+KSG D G P + + + + I GSE +GG
Sbjct: 267 DHVVIANCTLGAHDDNIAIKSGRDADGRRVNVPCQNLVVVNCVMNGNWGAITCGSEQTGG 326
Query: 131 VENVLAEHINLY-NVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
+ NV A + + + ++VK+N RGGF NI + V AR + +
Sbjct: 327 IRNVYAYKLTVKGDTKFALYVKSNTLRGGFSENINLDSVSGTFARNFVYVTSTYNSQTG- 385
Query: 190 KFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPPLK 248
+ +P TI + TK+ + GL N+ G ++N +GV+ TS LK
Sbjct: 386 ----SYVPSFGPFTISNCSSTKIAGKTFDVSGLSNAHVHGFAVANSTFKGVS-DTSNTLK 440
Query: 249 CSD 251
D
Sbjct: 441 YVD 443
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP +I + ++I++ +V +NSP W IHP+ ++ + I P DSPNTDG+DP+S
Sbjct: 194 RPRMIFLVGCKNILVESVTVKNSPSWTIHPLMSEDLKFINLYIENPKDSPNTDGLDPESC 253
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I S GDD +A+KSG PS I IR + + +GSE S G
Sbjct: 254 KNVHILGVNFSVGDDCIAIKSGKIFISKIKTMPSQHIYIRNCNMNFGHGAVVLGSEMSSG 313
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGG-------FIRNITVSDV 168
+ N+ E+ GI +KT GRG + RNI ++ V
Sbjct: 314 INNIYVENCLFNETDRGIRIKTRRGRGDTAIIDEIYARNIKMNKV 358
>gi|315570522|gb|ADU33265.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 409
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 15/244 (6%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS----PNTD 63
P TRP + F+ S+ +++ V +NSP +N+H S++ I+ +TI P ++ PNTD
Sbjct: 147 PSTRPFFLYFVESQEVLLEGVHIKNSPMYNVHFKDTSHITIKGITITNPENTVDPGPNTD 206
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GI+ D + + + ISTGDD + +K+ P+ + I +GI++
Sbjct: 207 GINCDPCRYLHVSNVTISTGDDAIVMKADMRGRTSKQLKPTEHVLIENSFIFVGHAGISM 266
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK-GIKIAGD 182
GS T+GG+ N+ + GI++KT RGG + +I ++ M N RK G+ IA D
Sbjct: 267 GSATAGGLRNITVRNCLFNGTNRGIYIKTARDRGGKVEDIHYHNITMLNIRKEGVAIA-D 325
Query: 183 VGDHPDDKFNPNAL---------PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
V + D+ + + P + I + + G +S I GL SP I +
Sbjct: 326 VYNGTDEGLHERNVYPQPVTENTPFIGNIEFQGIRGNSKLESIFIVGLPESPVVNITFKD 385
Query: 234 INLQ 237
+ +
Sbjct: 386 FSAK 389
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 3/166 (1%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RP+LI+ +N+ +++ + NSPFW H VY + +R V + + N DG+D D
Sbjct: 208 FLRPSLIQILNAERVLLQDYTALNSPFWVNHLVYTDHAQVRGVKV--DSMFANNDGLDID 265
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S + +E+++ TGDD +A+KSG D G G PS I +R G+ +GSE S
Sbjct: 266 SGRWILVENNHFRTGDDSIAIKSGRDLDGRTIGRPSENIVVRNNLFDGE-DGVGLGSEMS 324
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
GG++NV + +K N+ RGG + ++ + ++ + +A+
Sbjct: 325 GGIKNVYFTDNDYLKGTSAFRLKANLDRGGSVEHVRIRNMKIGSAK 370
>gi|194695268|gb|ACF81718.1| unknown [Zea mays]
Length = 120
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%)
Query: 170 MENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGI 229
MEN GI+ G+ HPDD F+P+ LP ++ +T+K++ GT + +G++ G++ +PFT I
Sbjct: 1 MENVHVGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAI 60
Query: 230 CLSNINLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSEL 267
CLSN+N AG CSDVSG + V P PC+EL
Sbjct: 61 CLSNLNFSMAAGSGPSSWSCSDVSGYSEAVFPEPCTEL 98
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 4/160 (2%)
Query: 114 GSSPFSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 173
G + F+G+ GS + +V+ + L N I +KT IGRGG+I++I M+
Sbjct: 934 GDARFTGLVYGS----NLTDVVITEVTLINTQSAIRIKTAIGRGGYIKDIFARRFTMKTM 989
Query: 174 RKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSN 233
+ + G HP F+P ALP ++ I +D+ V S ++ +KN PFTG+C+S+
Sbjct: 990 KYVFWMTGSYKLHPVGGFDPKALPEISNIHYRDMTAENVTISAKLERIKNGPFTGLCMSS 1049
Query: 234 INLQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSSQQT 273
+ + P C+DVSG +V P PCS L + T
Sbjct: 1050 VTIALSPDPKKLQWNCTDVSGVTSRVTPEPCSLLPDKRTT 1089
>gi|326799725|ref|YP_004317544.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550489|gb|ADZ78874.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 528
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 18 MNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIED 77
+N R ++I V + + FWNI P YC V+IR VTI + P DGID +SS NV IE
Sbjct: 227 INCRDVLIEGVRLERTAFWNIVPQYCDRVIIRGVTIHSIG-IPRGDGIDVESSKNVLIEY 285
Query: 78 SYISTGDDLVAVKS--GWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVL 135
+ TGDD +A+K+ GWD G+ P+ + +R GI +GSET+G + +
Sbjct: 286 CTLQTGDDCLAMKAGRGWD--GLRVNRPTENVVVRYCLAEKGHGGITIGSETAGMIRKLY 343
Query: 136 AEHINLYNVGVGIHVKTNIGRGG 158
N G GI KT RGG
Sbjct: 344 VHDCVFNNEGNGIRFKTRRPRGG 366
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 5 RTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +PF RP L+ F + IS + N W +H +Y + I + I A P+
Sbjct: 821 KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPS 880
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
+DGID DSS+++ I + I DD +++KSG DE G G PS I I + G+
Sbjct: 881 SDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHGGV 940
Query: 122 AVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
A+GSE SGG+ NV + N + K+ RGG + NIT D+ ++ AR I
Sbjct: 941 AMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDIN 1000
Query: 181 GDVGDHPDDKFNPNALPV--VNGITIKDVWGTKVQQSGLIQGLKNSPF 226
+ P +P P+ + I K++ G + Q +G + G K +PF
Sbjct: 1001 MEWRMVP--PLSPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKEAPF 1045
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 9/162 (5%)
Query: 13 NLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSN 72
+LI N + + + +N W + PVY ++ + ++ N DG DP+SSSN
Sbjct: 295 SLISMKNVGGVYLDGIHIRNGMMWTVVPVYSKDITAYGLQLVTSVH--NGDGFDPNSSSN 352
Query: 73 VCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVE 132
V I + STGDD A+KSG D GIA PS I R +S G+ +GSE SGGV
Sbjct: 353 VWILGTSFSTGDDCSAIKSGKDAEGIAIARPSENIYFRGDVFNSGHGGVTIGSEMSGGVR 412
Query: 133 NVLAEHINLYNVGV-------GIHVKTNIGRGGFIRNITVSD 167
NV E + V + GI VK + RGG++RNI V D
Sbjct: 413 NVFVEDSTIVPVDLTSGAVNPGIRVKVSPKRGGYVRNIQVRD 454
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 5 RTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +PF RP L+ F + IS + N W +H +Y + I + I A P+
Sbjct: 821 KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPS 880
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
+DGID DSS+++ I + I DD +++KSG DE G G PS I I + G+
Sbjct: 881 SDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHGGV 940
Query: 122 AVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
A+GSE SGG+ NV + N + K+ RGG + NIT D+ ++ AR I
Sbjct: 941 AMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDIN 1000
Query: 181 GDVGDHPDDKFNPNALPV--VNGITIKDVWGTKVQQSGLIQGLKNSPF 226
+ P +P P+ + I K++ G + Q +G + G K +PF
Sbjct: 1001 MEWRMVP--PLSPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKETPF 1045
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 5 RTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +PF RP L+ F + IS + N W +H +Y + I + I A P+
Sbjct: 821 KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPS 880
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
+DGID DSS+++ I + I DD +++KSG DE G G PS I I + G+
Sbjct: 881 SDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHGGV 940
Query: 122 AVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
A+GSE SGG+ NV + N + K+ RGG + NIT D+ ++ AR I
Sbjct: 941 AMGSEISGGIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDITIKGARSIFDIN 1000
Query: 181 GDVGDHPDDKFNPNALPV--VNGITIKDVWGTKVQQSGLIQGLKNSPF 226
+ P +P P+ + I K++ G + Q +G + G K +PF
Sbjct: 1001 MEWRMVP--PLSPAHYPLTSLRNIHFKNING-EAQSAGTMYGFKEAPF 1045
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPD 68
RP LIEF S+ + ++ + SPFW +H Y + V + +TI P+TDG+D D
Sbjct: 169 RPRLIEFYQSQHVSLAGLHLLRSPFWTVHICYSAYVHVDGITIRNNIGGRGPSTDGVDID 228
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS +V +E + IS DD + +K+G D G+ P I IR T + +GSETS
Sbjct: 229 SSRHVLVEHADISVNDDALCLKAGRDSDGLRVNKPDVDIVIRNCTVRYGAAAFTIGSETS 288
Query: 129 GGVENVLAEHIN-LYNVGVGIHVKTNIGRGGFIRNITVSDVYME 171
GG NV +I+ L +V G+ K+ RGG+ NI + D ++
Sbjct: 289 GGFRNVDVYNIHALEHVPSGVLFKSAHTRGGWADNIRIHDFQLD 332
>gi|409441796|ref|ZP_11268657.1| putative modular protein: Endo-polygalacturonase (N-term), Pectin
methylesterase (C-term) [Rhizobium mesoamericanum
STM3625]
gi|408746731|emb|CCM79902.1| putative modular protein: Endo-polygalacturonase (N-term), Pectin
methylesterase (C-term) [Rhizobium mesoamericanum
STM3625]
Length = 780
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 117/231 (50%), Gaps = 26/231 (11%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P LI+ + + +N+ +++ I + I PA + NTDGIDP SS+
Sbjct: 190 PRLIQVNGGEDVTFYRLALRNAANFHLFLNGVRGATIWGIRINTPASARNTDGIDPASST 249
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS--GIAVGSETSG 129
+V I +SYISTGDD +A+K G P++ +TI G+ ++ G+++GSET
Sbjct: 250 DVTIAESYISTGDDNIAIKGG-------SAGPTAHVTI---VGNHLYAGHGMSIGSETQS 299
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
GV +VL + L G+ +K++ RGG +RNI +V + N R + + D
Sbjct: 300 GVSDVLITDMTLDGTTNGLRIKSDRSRGGLVRNIDFENVCLRNTRAPLVL--------DT 351
Query: 190 KFNPNA----LPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
++ A LPV + IT++++ GT +++G+ G+ L N+N
Sbjct: 352 TYDATATGMLLPVYSSITLRNIQGTGGPL--VVRGVDALHSVGLLLDNVNF 400
>gi|372223082|ref|ZP_09501503.1| glycoside hydrolase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 453
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 9/176 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+L++F++ ++I+I V F++SPFW H + S + IR ++ A + N DGID +
Sbjct: 199 RPHLLQFIDCKNILIEGVHFEDSPFWTTHFLRSSEITIRGISF--NAHNKNNDGIDLEYV 256
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGH-PSSGITIR--RVTGSSPFSGIAVGSET 127
+NV IE+ + DD +A+K+G D G A PS I IR R G + +GSE
Sbjct: 257 NNVLIENVDFNNSDDNIAIKAGRDTEGRANSETPSQNIVIRNNRFKG---LHALVIGSEM 313
Query: 128 SGGVENVL-AEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD 182
S GV+NV +++ + G++ KTN RGG+I++I + + ++ I + +
Sbjct: 314 SAGVKNVFVVDNMASGYLKRGVYFKTNSDRGGYIKSIYIDQLELQKTEDCIYMTAN 369
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A D N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGD--NNDGIDFEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 324 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQAGTAQRVLEIDTEV 377
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIVRNLDVRAHGH--NNDGIDFEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTLLGIGSEISGG 323
Query: 131 VENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ Y+V VKTN RGGFI NI + +V A++ ++I +V
Sbjct: 324 IRNIYMHDCTAPYSVMRLFFVKTNHRRGGFIENIYMKNVASGTAQRVLEIDTEV 377
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A D N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDVKAHGD--NNDGIDFEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 324 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQAGTAQRVLEIDTEV 377
>gi|333382504|ref|ZP_08474174.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828815|gb|EGK01507.1| hypothetical protein HMPREF9455_02340 [Dysgonomonas gadei ATCC
BAA-286]
Length = 717
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPD 68
RP + S + + + F+ + FW I +Y S + V I P+TDG+D D
Sbjct: 185 RPRTLLVSESSDVTVKGLTFRQAGFWTIQILYSSYCTVDGVIIQNNVGGHGPSTDGVDID 244
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SSS + +E+ I DD +KSG D G+ P+ I IR + + GSETS
Sbjct: 245 SSSYILVENCDIDCNDDNFCLKSGRDADGLRVNRPTEYIVIRNCISRAGGGLLTCGSETS 304
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
GG+ +VLAE + VGI +K+ + RGG +I + DV M+N R
Sbjct: 305 GGIRHVLAEGLKAKGTTVGIRLKSAMNRGGTTEHIYIRDVEMDNVR 350
>gi|427384664|ref|ZP_18881169.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
gi|425727925|gb|EKU90784.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
Length = 545
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F P I +N ++ I + S WN+ P YC NV+IR +T+ + P DGID +
Sbjct: 219 FQPPRTIAPINCTNVFIEGITMNRSAIWNVVPTYCENVIIRGITVNSLG-IPRGDGIDVE 277
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS NV IE ++ GDD +KSG E G+ G P+ + IR GI GSET+
Sbjct: 278 SSKNVLIEYCTLNCGDDCFTLKSGRGEEGVRIGRPTENVVIRYSLAQQGHGGITCGSETA 337
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGG--------FIRNITVSDVYMENARKGIKIA 180
G ++N+ A GI K RGG IR I V+ ++ + +
Sbjct: 338 GNIKNIYAHDCVFNGTWSGIRFKAFRPRGGGTENVLYKRIRMIDVNVAFIWDMLGSRRWV 397
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKD 206
GD+ + + P++ I +KD
Sbjct: 398 GDLANRLPLREVTELTPILRNIHVKD 423
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 73/131 (55%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RPN + N ++I + + NSP W +HP Y N++ TI+ P +SPNTDG+DP+S
Sbjct: 222 RPNTVFLHNCKNIAMQGLCIMNSPSWTLHPYYSDNLLFLNNTIMNPDNSPNTDGLDPESC 281
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I + IS GDD +A+KSG + + P+ I IR + +GSE + G
Sbjct: 282 ENVLILGADISVGDDCIAIKSGKYYMALRHYKPAKNIVIRNSIFRKGHGSVTIGSEVAAG 341
Query: 131 VENVLAEHINL 141
V +V E++ L
Sbjct: 342 VYDVSVENVYL 352
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 22/237 (9%)
Query: 11 RPN-LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 69
RP+ +IE R++ I V N+P W + PV C V+IR + + P +PNTDG+D +
Sbjct: 172 RPSPMIELARCRNVRIEGVTLTNAPGWTLRPVACETVLIRGIRVRNPIYAPNTDGMDITA 231
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
NV + D I+TGDD + +KS + YG P+ IT+ S+ +G VG+ T G
Sbjct: 232 CRNVFVSDCDIATGDDAICIKS-ENPYGELL--PTKNITVTNCVLSTCCNGFKVGTSTHG 288
Query: 130 GVENVLAEHINLYNVGV---------GIHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
VEN++ + +YN GI ++ + GG + + +S++ MENAR + +
Sbjct: 289 RVENIVFSNSVIYNESTTPLNERATSGIALE--VVDGGSMSGVLISNIQMENARTPLFVR 346
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQ 237
+G + P + GI + + T + I GL + P + ++N + +
Sbjct: 347 --LG-----RRKPAQGSFLRGIRFEQIHATGALLTSSITGLPDMPVEDVVIANSSFR 396
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 16/175 (9%)
Query: 2 WRQRTLPFTRPNLIEFMNS-RSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP 60
WR RTL F+N+ ++I++ V +NSP W IHP+ ++ ++I P ++P
Sbjct: 220 WRPRTL---------FLNACKNILVEGVTIKNSPSWTIHPLMSDHLKFINLSIENPFNAP 270
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHP--SSGITIRRVTGSSPF 118
NTD +DP+S NV I S GDD +A+KSG + I+ +P S I IR S
Sbjct: 271 NTDALDPESCKNVLILGDTFSVGDDCIAIKSG--KIDISKKNPVSSENINIRNCNMRSGH 328
Query: 119 SGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYME 171
+ +GSE S G++++ E G+ +KT GRG G I NI + ++ M+
Sbjct: 329 GAVVLGSEMSSGLKSIFIEKCIFNATDRGLRIKTRRGRGSKGIIDNIHMKNIKMD 383
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 15/240 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++S +I + + QNS W IHP++ ++ + I P ++PNTDGIDP+S
Sbjct: 221 RPRAVAMVDSENICLHGITVQNSYSWTIHPIFVKHLDLLSFNINNPYNAPNTDGIDPESC 280
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
I I GDD +A+K+ G+ IR GI +GSE SGG
Sbjct: 281 EYTRIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCLLDKGHGGIVIGSEMSGG 340
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
V++++ + + G+ VKT GRG I + +V M + I PD
Sbjct: 341 VKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKAPFVINMFYFCDPD 400
Query: 189 DKFNP-----NALPV------VNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINL 236
+P ALPV + +T++D+ T Q +G GL P G+ + N+ +
Sbjct: 401 GH-SPYVQCREALPVDEYTPKLGTLTMEDIVATDAQFAGCYFDGLPEQPIEGVSMKNVTI 459
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Query: 11 RPNLIEFMNSRSIIISN-VIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDP 67
RP L++ NS I I ++ + S FW +H Y ++V +TI P+TDGID
Sbjct: 165 RPRLVQVFNSSHIKIGGGLLLRRSGFWTLHICYSTDVTADGLTIRNNEGGRGPSTDGIDI 224
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
DSS ++ + + I+ DD + +K+G D G+ P+ + +R T +G+ GSET
Sbjct: 225 DSSKHIVVAHADIAVNDDALCLKAGRDSDGLRVNRPTEDVVLRDSTIRDGAAGVTFGSET 284
Query: 128 SGGVENVLAEHINLY-NVGVGIHVKTNIGRGGFIRNITVSDVYMEN 172
SGG N+ A ++ ++ +V VGI K+ RGGF N+ + D+ + +
Sbjct: 285 SGGFRNIEAYNLKVFGHVPVGILFKSAHTRGGFAENVRIHDLTLTD 330
>gi|449446684|ref|XP_004141101.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449489467|ref|XP_004158321.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 477
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 17/243 (6%)
Query: 7 LPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGID 66
LP T+P + F S + +S + QNS ++ C+ V + +TI +P DSPNTDGI
Sbjct: 214 LPSTKPTALRFYGSDEVTVSGITIQNSQKAHLKFDSCTAVQVSSLTISSPGDSPNTDGIH 273
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG-- 124
+S NV I +S I+ GDD +++++G SSG+ I V P GI++G
Sbjct: 274 LQNSQNVIISNSNIACGDDCISIQTG-----------SSGVYIHNVN-CGPGHGISIGGL 321
Query: 125 --SETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGD 182
+T V NV + L N G+ +KT G G ++ I S++ + + + I I
Sbjct: 322 GRDDTKACVSNVTVRDVKLQNTMNGVRIKTWQGGSGLVQGILFSNIQVTDVQTPIMIDQY 381
Query: 183 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
D N ++ ++G+ ++ GT + P TG+ L I L+G +G
Sbjct: 382 YCD-GGRCHNGSSAVAISGVNYVNIRGTYTSTPVHFACSDSLPCTGVTLDTIQLEGSSGS 440
Query: 243 TSP 245
P
Sbjct: 441 NEP 443
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 5/232 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F R++++ + SPFW IH C+ + R + + A N DGID + +
Sbjct: 205 RPHLIHFNRCRNVLLDGFKIRESPFWTIHIYMCNGGIARNLDV--KAHGHNNDGIDLEMT 262
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G + P+ I IR + + +GSE SGG
Sbjct: 263 RNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTLLGIGSEISGG 322
Query: 131 VENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
+ NV + +V VKTN RG F+ NI + ++ + ++ ++I DV D
Sbjct: 323 IRNVYMHDCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEIDTDVLYQWKD 382
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ ++GI +K+V T ++G P + + ++++ V
Sbjct: 383 LVPTYEERITRIDGIYMKNVVCTSADAIYELKGDAKLPVRNVVIEDVHVNEV 434
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 168 RPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMS 225
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 226 RNFLIENCVFDQGDDAVVIKAGRNQNAWRLNTPCENIVIRHCNILKGHTLLGIGSEMSGG 285
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV + + V KTN RGGFI NI + +V ++ +++ DV D
Sbjct: 286 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRD 345
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+++ +NG+ + V + + ++G P + + N+ +
Sbjct: 346 LVPTYQDSITFINGLYMDSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 394
>gi|404400995|ref|ZP_10992579.1| endopolygalacturonase [Pseudomonas fuscovaginae UPB0736]
Length = 737
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 30/233 (12%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P LIE SR I + + N+ +++ + I AD+ NTDGIDP SS
Sbjct: 178 PRLIEIDRSRDITLYGLRLHNAANFHVVAYQVDGFTAWGLIIDTAADARNTDGIDPMGSS 237
Query: 72 NVCIEDSYISTGDDLVAVKSGWD----EYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
NV + ++I TGDD VA+K+G I H SG G+++GSET
Sbjct: 238 NVTLAHNFIRTGDDNVAIKAGSQGPSRHLSILDNHFYSG------------HGMSIGSET 285
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
+ GV +VL + L GI +K++ RGG ++++ D+ + N R+ I I D
Sbjct: 286 NSGVADVLVRGLTLDGTTSGIRIKSDASRGGIVQDVRYQDICLRNNRQPIDI--DTAYAK 343
Query: 188 DDKFNPNALPVVNGITIKDVWGT----KVQQSGLIQGLKNSPFTGICLSNINL 236
D NA+PV I ++ V G ++Q SG SP G+ L +++
Sbjct: 344 D--VTGNAIPVYRDIVLQHVHGADGILRIQASGA------SPAIGLTLDDVHF 388
>gi|345513296|ref|ZP_08792818.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437084|gb|EEO47161.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 849
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 11/233 (4%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P +N +++ + V F+ +WNI P YC +++IR +T+ + TDGID DSS+
Sbjct: 193 PKTFAPINCKNVFVEGVTFERGLYWNIVPQYCEHILIRGITVNSFGHG-RTDGIDIDSSN 251
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
+V IE + DD +KSG + G+ P+S + IR+ GI G+E +GGV
Sbjct: 252 DVLIEYCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRKSIALRGAGGIVCGTEIAGGV 311
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI--------KIAGDV 183
NV KT RGGF+ NI V V R+ + + G++
Sbjct: 312 RNVYMYDCVFEGTDQAFRFKTRRPRGGFVENIYVERVRANVKRQALYCDMLGSARWVGEL 371
Query: 184 GD-HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+P + P P I+I DV T + L P N+
Sbjct: 372 AQRYPTREITP-LTPWFANISIHDVEITGCSTLVDVSALPEKPVKNFFFGNVK 423
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 29/254 (11%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSPNTDGIDPDS 69
R + M S I + ++ S FWNIH Y ++ + + I + +SP+TDGID DS
Sbjct: 149 RVRNVVIMESSRITLKDITSMRSGFWNIHICYSDHIHVDGIKIASCGGESPSTDGIDIDS 208
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
+V +E+ DD + +KSG D GI P IT++ + F G+ +GSE SG
Sbjct: 209 CHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHDITVQNCEIRAGF-GVTIGSEVSG 267
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI---------- 179
GV + +++ + G +K+++ R G+IR++ V + M N +
Sbjct: 268 GVYQITLKNLRYHGTDCGFRIKSSVARHGYIRDVRVEGLSMVNVKYPFHFFLNWNPAYSY 327
Query: 180 -------AGDVGDHPDDKFN--PNALP--VVNGITIKDVWGTK------VQQSGLIQGLK 222
G++ +H P+++P V+ ITI++V + ++ I+G +
Sbjct: 328 CELPGDYEGEIPEHWKKLLEAIPDSVPKTKVSNITIENVTARNEADYNGISRAFHIEGFE 387
Query: 223 NSPFTGICLSNINL 236
+ P + N++L
Sbjct: 388 DQPVEHVIFKNVSL 401
>gi|265754967|ref|ZP_06089881.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234578|gb|EEZ20157.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 849
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 11/233 (4%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P +N +++ + V F+ +WNI P YC +++IR +T+ + TDGID DSS+
Sbjct: 193 PKTFAPINCKNVFVEGVTFERGLYWNIVPQYCEHILIRGITVNSFGHG-RTDGIDIDSSN 251
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
+V IE + DD +KSG + G+ P+S + IR+ GI G+E +GGV
Sbjct: 252 DVLIEYCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRKSIALRGAGGIVCGTEIAGGV 311
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI--------KIAGDV 183
NV KT RGGF+ NI V V R+ + + G++
Sbjct: 312 RNVYMYDCVFEGTDQAFRFKTRRPRGGFVENIYVERVRANVKRQALYCDMLGSARWVGEL 371
Query: 184 GD-HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+P + P P I+I DV T + L P N+
Sbjct: 372 AQRYPAREITP-LTPWFANISIHDVEITGCSTLVDVSALPEKPVKNFFFGNVK 423
>gi|212693767|ref|ZP_03301895.1| hypothetical protein BACDOR_03288 [Bacteroides dorei DSM 17855]
gi|423232657|ref|ZP_17219057.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|423242091|ref|ZP_17223201.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
gi|423247347|ref|ZP_17228397.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|212663656|gb|EEB24230.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|392623750|gb|EIY17852.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|392632755|gb|EIY26712.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|392639835|gb|EIY33643.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
Length = 849
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 11/233 (4%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P +N +++ + V F+ +WNI P YC +++IR +T+ + TDGID DSS+
Sbjct: 193 PKTFAPINCKNVFVEGVTFERGLYWNIVPQYCEHILIRGITVNSFGHG-RTDGIDIDSSN 251
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
+V IE + DD +KSG + G+ P+S + IR+ GI G+E +GGV
Sbjct: 252 DVLIEYCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRKSIALRGAGGIVCGTEIAGGV 311
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI--------KIAGDV 183
NV KT RGGF+ NI V V R+ + + G++
Sbjct: 312 RNVYMYDCVFEGTDQAFRFKTRRPRGGFVENIYVERVRANVKRQALYCDMLGSARWVGEL 371
Query: 184 GD-HPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+P + P P I+I DV T + L P N+
Sbjct: 372 AQRYPAREITP-LTPWFANISIHDVEITGCSTLVDVSALPEKPVKNFFFGNVK 423
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 RNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCNILKGHTLLGIGSEMSGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV + + V KTN RGGFI NI + +V ++ +++ DV D
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRD 383
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+++ +NG+ + V + + ++G P + + N+ +
Sbjct: 384 LVPTYQDSITFINGLYMDSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 RNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV + + V KTN RGGFI NI + +V ++ +++ DV D
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRD 383
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+++ +NG+ + V + + ++G P + + N+ +
Sbjct: 384 LVPTYQDSITFINGLYMDSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|397165281|ref|ZP_10488732.1| endo-polygalacturonase [Enterobacter radicincitans DSM 16656]
gi|396092938|gb|EJI90497.1| endo-polygalacturonase [Enterobacter radicincitans DSM 16656]
Length = 357
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P LIE + +II + +NSP +++ N V I PA++ NTDGIDP SS
Sbjct: 92 PRLIEIDDGSNIIFHGITLRNSPGFHVTLKNVRNATFWGVRIDTPANARNTDGIDPVSSQ 151
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPF---SGIAVGSETS 128
N+ I S+I TGDD VA+K+G ++G T + + F G+++GSET
Sbjct: 152 NIVIAHSFIRTGDDNVAIKAG-----------AAGPTRHVLLVDNHFYWGHGMSIGSETV 200
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
GGV ++ + L G+ +K++I RGG + +I +V M R+ + D H D
Sbjct: 201 GGVSDIRVRDLTLDGTTSGLRIKSDISRGGMVSDIRYDNVCMRGNRRPL----DFDTHYD 256
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQ 213
N +PV I++ + G Q
Sbjct: 257 AHAIGNNIPVYRDISLSHISGETGQ 281
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 CNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV + + V KTN RGGFI NI + +V ++ +++ DV D
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRD 383
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+++ +NG+ + V + + ++G P + + N+ +
Sbjct: 384 LVPTYQDSITFINGLYMDSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 CNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV + + V KTN RGGFI NI + +V ++ +++ DV D
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRD 383
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+++ +NG+ + V + + ++G P + + N+ +
Sbjct: 384 LVPTYQDSITFINGLYMDSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 RNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV + + V KTN RGGFI NI + +V ++ +++ DV D
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRD 383
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+++ +NG+ + V + + ++G P + + N+ +
Sbjct: 384 LVPTYQDSITFINGLYMDSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 35/259 (13%)
Query: 11 RPNLIEFMNSRSIIISNVI-FQNSPFWNIHPVYCSNVVIRYVTILAPADS--PNTDGIDP 67
RP LI+ NS+ I + + + + FW + VY ++V + V I +D P+TDGID
Sbjct: 216 RPRLIQVYNSKRIELGGGLHMKRAGFWTLQIVYSNDVKVSNVVIRNNSDGKGPSTDGIDI 275
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
DSS +V +E + I DD + +K+G D G+ P+ + IR +G+ GSET
Sbjct: 276 DSSHHVLVEKADIDVNDDALCLKAGRDADGLRVNRPTEHVVIRDSIIRHAEAGVTFGSET 335
Query: 128 SGGVENVLAEHINLYNVGV------GIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-- 179
SG + N I++YN+ V GI K+ RGG + +I + D+ ++NA +++
Sbjct: 336 SGSIRN-----IDVYNLDVQGPVYSGIFFKSAHVRGGTVSDIRIRDMKVQNAEAAVRVDL 390
Query: 180 --------------AGDVGDHPDDKFNP----NALPVVNGITIKDVWGTKVQQSGLIQGL 221
+V +H P +P + I I ++ + + L+QG
Sbjct: 391 NWLPVYSYPVIPPGIKNVPEHWKILATPVPKEKGMPKLRDIHISNI-KAEANAAFLMQGY 449
Query: 222 KNSPFTGICLSNINLQGVA 240
+P + SN+++ A
Sbjct: 450 AEAPLQNVHFSNMHITAAA 468
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 324 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVKAGTAQRVLEIDTEV 377
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDEFKIRQSPFWTIHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 CNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTLLGIGSEMSGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV + + V KTN RGGFI NI + +V ++ +++ DV D
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRD 383
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+++ +NG+ + V + + ++G P + + N+ +
Sbjct: 384 LVPTYQDSITFINGLYMDSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|357055786|ref|ZP_09116847.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
gi|355381906|gb|EHG29017.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
Length = 456
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP L+ + I +VI +N+PFW +HP C +V+I + IL + N+DGIDPD
Sbjct: 140 YPRPTLVYAEHCNHISFKDVIMRNAPFWTLHPAGCDDVLISGLRILNDLNVANSDGIDPD 199
Query: 69 SSSNVCIEDSYISTGDDLVAVK--SGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSE 126
S+NV I +++ DD + +K SG EYG P + I T +S + + +G+E
Sbjct: 200 HSTNVRIIGCHVTCADDCICLKSSSGNMEYG-----PLKNVIISGCTLTSTSAALKIGTE 254
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
+G ENV+ ++ + + GI ++ I GG +RN++ S++ +E R
Sbjct: 255 GTGDFENVVVDNCIISDSNRGISIQ--IRDGGNVRNVSFSNIIIETRR 300
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F ++I + + SPFW IH C V+R + + A N DGID + S
Sbjct: 496 RPHLIHFNRCKNIQLEGFRIRESPFWTIHIYMCDGGVVRNLDVRAHGH--NNDGIDFEMS 553
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +E+ GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 554 KNFLVENCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGG 613
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ + N V VKTN RGGFI NI + DV N ++ ++I +V
Sbjct: 614 IRNIYMHDCTVPNSVMRLFFVKTNHRRGGFIENIYMKDVNAGNVQRVLEIDTEV 667
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP LI+F +++ +++ + NSPFW H VY S+ +R V + + N DG+D +
Sbjct: 215 YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKV--ESHLYNNDGLDIE 272
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS V ED++ TGDD + +KSG D G G PS+ I R GI +GSE S
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGE-DGIGLGSEMS 331
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 165
GG++ V E+ L+ K+N+ RGG + + +
Sbjct: 332 GGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRI 368
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 207 RPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMS 264
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 265 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGG 324
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 325 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVKAGTAQRVLEIDTEV 378
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP LI+F +++ +++ + NSPFW H VY S+ +R V + + N DG+D +
Sbjct: 215 YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKV--ESHLYNNDGLDIE 272
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS V ED++ TGDD + +KSG D G G PS+ I R GI +GSE S
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGE-DGIGLGSEMS 331
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 165
GG++ V E+ L+ K+N+ RGG + + +
Sbjct: 332 GGIKRVFFENNVLHEGDSAYRFKSNLDRGGRVEMVRI 368
>gi|423301906|ref|ZP_17279929.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
gi|408470997|gb|EKJ89529.1| hypothetical protein HMPREF1057_03070 [Bacteroides finegoldii
CL09T03C10]
Length = 489
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 6/181 (3%)
Query: 19 NSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPDSSSNVCIE 76
NS+ I + + + FW +Y + + VTI P+TDGID DSS+N+ +E
Sbjct: 202 NSKHITLKDFTLVRTGFWACQILYSDHCSVDGVTINNNVGGHGPSTDGIDIDSSTNILVE 261
Query: 77 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGVENVLA 136
+ + DD + +K+G D G+ P+ + IR T + GSETSG + NVLA
Sbjct: 262 NCEVDCNDDNICIKAGRDADGLRVNRPTENVVIRNCTARKGAGLVTCGSETSGSIRNVLA 321
Query: 137 EHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKFNPNAL 196
+ Y G + +K+++ RGG + NI ++ V ++ +K VG + + K++ +AL
Sbjct: 322 YDLKAYGTGAALRLKSSMNRGGTVENIYMTRVKADS----VKYVLAVGLNWNPKYSYSAL 377
Query: 197 P 197
P
Sbjct: 378 P 378
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 198 RPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGMVRNLDVRAHGH--NNDGIDFEMS 255
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 256 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTLLGIGSEISGG 315
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI NI + +V A++ ++I +V
Sbjct: 316 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKNVEAGTAQRVLEIDTEV 369
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 208 RPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIVRNLDVRAHGH--NNDGIDFEMS 265
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 266 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTLLGIGSEISGG 325
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI NI + +V A++ ++I +V
Sbjct: 326 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKNVASGTAQRVLEIDTEV 379
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 5/232 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F R++++ + SPFW IH C + R + + A N DGID + +
Sbjct: 205 RPHLIHFNRCRNVLLDGFKIRESPFWTIHIYMCDGGIARNLDV--KAHGHNNDGIDLEMT 262
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G + P+ I IR + + +GSE SGG
Sbjct: 263 RNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTLLGIGSEISGG 322
Query: 131 VENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
+ NV + +V VKTN RG F+ NI + ++ + ++ ++I DV D
Sbjct: 323 IRNVYMHDCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRAGHVQRVLEIDTDVLYQWKD 382
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ ++GI +K+V T ++G P + + ++++ V
Sbjct: 383 LVPTYEERITRIDGIYMKNVVCTSADAIYELKGDTKLPARNVVIEDVHVNEV 434
>gi|270339777|ref|ZP_06005984.2| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
gi|270333786|gb|EFA44572.1| exo-poly-alpha-D-galacturonosidase [Prevotella bergensis DSM 17361]
Length = 464
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
R +L+ F + +++++ V +NSP +++ P C+NV+I V ++ P ++ N D ID +
Sbjct: 210 RTHLVRFTDCQNVLVQGVTLRNSPKFHLVPQRCTNVIIDNVKVICPWNAQNGDAIDIGNC 269
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
NV I ++ I GDD + +K G + G+ G P I I+ G +GSE GG
Sbjct: 270 KNVLIVNNTIDAGDDGICMKGGVGQKGVKDG-PCENINIQDNIVYHAHGGFVIGSEFCGG 328
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENAR 174
++N+ + G+ K+ +GRGG +I +S +YM + +
Sbjct: 329 MKNIFVHNNTFAGTDTGLRFKSGVGRGGTTSDIYISKIYMTDIK 372
>gi|424883298|ref|ZP_18306926.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WU95]
gi|392514959|gb|EIW39692.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WU95]
Length = 499
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 19/227 (8%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P LIE +++ I V +NSP ++ + V I APADS NTDGID +S
Sbjct: 218 PRLIEVDHAKEISFYKVKLRNSPNSHVVLNHVEGATFWGVQIDAPADSRNTDGIDLGASQ 277
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGGV 131
++ I S+I TGDD +A+K+G P+S ++I V G+++GSET GV
Sbjct: 278 DITIAHSFIRTGDDNIALKAG--------NGPTSHVSIVDVHLYWGH-GLSIGSETVAGV 328
Query: 132 ENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 191
++L + L G+ +K++I RGG + N+ +V + RK I D H DD
Sbjct: 329 SDILVRDVTLDGTTSGLRIKSDISRGGTVSNVRYENVCLRGNRKPI----DFDTHYDDNA 384
Query: 192 NPNALPVVNGITIKDVWGTKVQQSG--LIQGLKNSPFTGICLSNINL 236
++P+ I + +V G +SG +I+G + G+ +
Sbjct: 385 RGRSIPIYRDIVLHNVVG----ESGTLVIRGQDQAHALGVKFDGVRF 427
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 195 RPHLIHFNRCKNVMLDGFKIRESPFWTIHLYMCDGGIVRNLDVRAHGH--NNDGIDFEMS 252
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 253 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTLLGIGSEISGG 312
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI NI + +V A++ ++I +V
Sbjct: 313 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENIYMKNVASGTAQRVLEIDTEV 366
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 207 RPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMS 264
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 265 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGG 324
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 325 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVKAGTAQRVLEIDTEV 378
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 5/229 (2%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW +H C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDEFKIRQSPFWTVHLYMCDGGIVRNLDV--KAHGHNNDGIDLEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N IE+ GDD V +K+G ++ P I +R + + +GSE SGG
Sbjct: 264 RNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVVRHCNILKGHTLLGIGSEMSGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V NV + + V KTN RGGFI NI + +V ++ +++ DV D
Sbjct: 324 VRNVYMHNCTAPDSVFRLFFAKTNHRRGGFIENIWMKNVKAGKMQRVLEVDTDVLYQWRD 383
Query: 190 KF--NPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+++ ++NG+ + V + + ++G P + + N+ +
Sbjct: 384 LVPTYQDSITLINGLYMDSVTCDRTEAVYDLKGDARLPIKNVEIRNVTV 432
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 324 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQAGMAQRVLEIDTEV 377
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ + SPFW IH C ++R + + A N DGID + S
Sbjct: 206 RPHLIHFNRCKNVLLDGFKIRESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMS 263
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 264 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGG 323
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 324 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVQAGMAQRVLEIDTEV 377
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP LI+F +++ +++ + NSPFW H VY S+ +R V + + N DG+D +
Sbjct: 215 YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKV--ESHLYNNDGLDIE 272
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS V ED++ TGDD + +KSG D G G PS+ I R GI +GSE S
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGE-DGIGLGSEMS 331
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 165
GG++ V E+ L+ K+N+ RGG + + +
Sbjct: 332 GGIKRVFFENNILHEGDSAYRFKSNLDRGGRVEMVRI 368
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei CL02T12C06]
Length = 1095
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 5 RTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +PF RP L+ F + IS + N W +H +Y + I + I A P+
Sbjct: 821 KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPS 880
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
+DGID DSS+++ I + I DD +++KSG DE G G PS I I + G+
Sbjct: 881 SDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHGGV 940
Query: 122 AVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
A+GSE SG + NV + N + K+ RGG + NIT D+ ++ AR I
Sbjct: 941 AMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDIN 1000
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
+ P L + I K++ G + Q +G + G K +PF
Sbjct: 1001 MEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKEAPF 1045
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 5 RTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +PF RP L+ F + IS + N W +H +Y + I + I A P+
Sbjct: 821 KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPS 880
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
+DGID DSS+++ I + I DD +++KSG DE G G PS I I + G+
Sbjct: 881 SDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHGGV 940
Query: 122 AVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
A+GSE SG + NV + N + K+ RGG + NIT D+ ++ AR I
Sbjct: 941 AMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDIN 1000
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
+ P L + I K++ G + Q +G + G K +PF
Sbjct: 1001 MEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKETPF 1045
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 5 RTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +PF RP L+ F + IS + N W +H +Y + I + I A P+
Sbjct: 821 KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPS 880
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
+DGID DSS+++ I + I DD +++KSG DE G G PS I I + G+
Sbjct: 881 SDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHGGV 940
Query: 122 AVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
A+GSE SG + NV + N + K+ RGG + NIT D+ ++ AR I
Sbjct: 941 AMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDIN 1000
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
+ P L + I K++ G + Q +G + G K +PF
Sbjct: 1001 MEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKEAPF 1045
>gi|357470583|ref|XP_003605576.1| hypothetical protein MTR_4g034020 [Medicago truncatula]
gi|355506631|gb|AES87773.1| hypothetical protein MTR_4g034020 [Medicago truncatula]
Length = 373
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 21/262 (8%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + N ++ ++ NS +I Y +V I + I AP +SPNTDGID S
Sbjct: 119 RPTALHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHS 178
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
S V I+DS I+TGDD +A+ +G +S I I VT P GI+VGS G
Sbjct: 179 SYVLIQDSTIATGDDCIAMNNG-----------TSNINITGVT-CGPGHGISVGSLGENG 226
Query: 131 ----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
VE V ++ G+ +KT G G+ RNI+ + + + I I + D
Sbjct: 227 AYEIVEQVYVKNCTFIRTENGMRIKTWPGGSGYARNISFEQIILTETKNPIIIDQNYRDL 286
Query: 187 PDDKFN--PNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPT 243
DK N + ++G+T +DV GT ++ + + KNS T I + +N+ ++G T
Sbjct: 287 VIDKANNMQKSEVQISGVTYRDVIGTSNSKTSIKLNCNKNSGCTDIFMDVVNITSISGKT 346
Query: 244 SPPLKCSDVSGSAYQVKPW-PC 264
+ C + G A P+ PC
Sbjct: 347 TKA-SCKNAHGEASSTSPYVPC 367
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei CL03T12C01]
Length = 1095
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 5 RTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +PF RP L+ F + IS + N W +H +Y + I + I A P+
Sbjct: 821 KKIPFGNSGRPRLVCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPS 880
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
+DGID DSS+++ I + I DD +++KSG DE G G PS I I + G+
Sbjct: 881 SDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHGGV 940
Query: 122 AVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
A+GSE SG + NV + N + K+ RGG + NIT D+ ++ AR I
Sbjct: 941 AMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDIN 1000
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
+ P L + I K++ G + Q +G + G K +PF
Sbjct: 1001 MEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKEAPF 1045
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 5 RTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
+ +PF RP L+ F + IS + N W +H +Y + I + I A P+
Sbjct: 204 KKIPFGNSGRPRLLCFTDCPGGKISGLKMINQASWCLHVLYTNGFTIDGIDIRALEYIPS 263
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
+DGID DSS+++ I + I DD +++KSG DE G G PS I I + G+
Sbjct: 264 SDGIDIDSSNDILITSTRIEAHDDCISIKSGRDEDGRRVGRPSENILIENCHFAYGHGGV 323
Query: 122 AVGSETSGGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIA 180
A+GSE SG + NV + N + K+ RGG + NIT D+ ++ AR I
Sbjct: 324 AMGSEISGDIRNVTIRSCLMDNENWSPLRFKSQPSRGGTVENITFEDIIIKGARSIFDIN 383
Query: 181 GDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPF 226
+ P L + I K++ G + Q +G + G K +PF
Sbjct: 384 MEWRMVPPLLPAHYPLTCLRNIHFKNING-EAQSAGTMYGFKEAPF 428
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP LI+F +++ +++ + NSPFW H VY S+ +R V + + N DG+D +
Sbjct: 215 YLRPPLIQFFHAKRVLLEDYTALNSPFWVNHLVYTSHATVRRVKV--ESHLYNNDGLDIE 272
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS V ED++ TGDD + +KSG D G G PS+ I R GI +GSE S
Sbjct: 273 SSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVARNNDLGGE-DGIGLGSEMS 331
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITV 165
GG++ V E+ L K+N+ RGG + I +
Sbjct: 332 GGIKRVFFENNVLQEGDSAYRFKSNLDRGGRVEMIRI 368
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 15/240 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP + ++S ++ + + QNS W IHP++ ++ + I P ++PNTDGIDP+S
Sbjct: 221 RPRAVAAVDSENVCLHGITVQNSYSWTIHPIFVKHLDLLNFNINNPYNAPNTDGIDPESC 280
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
+ I + I GDD +A+K+ G+ IR GI +GSE SGG
Sbjct: 281 EYIRIIGANIHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCLLDKGHGGIVIGSEMSGG 340
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRG--GFIRNITVSDVYMENARKGIKIAGDVGDHPD 188
V++++ + + G+ VKT GRG I + +V M + I PD
Sbjct: 341 VKDMVVTQCLMDHTDRGLRVKTRRGRGNTAVIDGLVFRNVEMRGVKTPFVINMFYFCDPD 400
Query: 189 DKFNP-----NALPV------VNGITIKDVWGTKVQQSG-LIQGLKNSPFTGICLSNINL 236
+P +A+PV + +T++D+ T Q +G GL P I + N+ +
Sbjct: 401 GH-SPYVQCRDAMPVDEYTPKLGSLTMEDIVATDAQFAGCYFDGLPEQPIERISMKNVTI 459
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 10/236 (4%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F RPN I+ + ++++ + +N P W ++PV C+NV +R + + + N DG +P+
Sbjct: 199 FLRPNFIQVIGCENVLVEGISIKNPPMWGVNPVLCTNVTVRGIEV--DGNFNNNDGCNPE 256
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAY---GHPSSGITIRRVTGSSPFSGIAVGS 125
+ + V IED G D VAVKSG + G G + + IR + SGIA GS
Sbjct: 257 NCNYVLIEDCRFQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGNEFAGGTSGIAFGS 316
Query: 126 ETSGGVENVLAE--HINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
E SG + ++ A+ ++ I K+N RGG + I + N R + I +
Sbjct: 317 EMSGDIRDIYADDNRFGTQSLDYAIRFKSNAARGGVVERIYIRGSRASNIRY-VSIHATM 375
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
D+ + + LP I I+D ++ P TG+ L +++++ V
Sbjct: 376 --LYDEGWMGSYLPEYRDIRIEDFTANGGTYGIFMEAFDQVPITGLELVDVDIRDV 429
>gi|383816572|ref|ZP_09971967.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
gi|383294566|gb|EIC82905.1| hypothetical protein SPM24T3_19510 [Serratia sp. M24T3]
Length = 415
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 20/202 (9%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P LIE ++R+++ + NSP +++ + + + VTI APA + NTDGIDP +++
Sbjct: 179 PRLIEIEHARNLVFYRIRLVNSPNFHMAMNHVEGITVWGVTINAPATARNTDGIDPGAAT 238
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVT----GSSPFSGIAVGSET 127
+V I S ISTGDD VA+K+G SG R ++ G+++GSET
Sbjct: 239 DVTIAHSIISTGDDDVAIKAG------------SGCGSRFISIIDNHFYAGHGMSIGSET 286
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
S GV +VL + L G+ +K+++ RGG + N+ ++ + + R I D P
Sbjct: 287 SAGVSDVLVNGLTLDGTTSGLRIKSDVSRGGLVNNLDFENITLHHNRWPINF--DTRYDP 344
Query: 188 DDKFNPNALPVVNGITIKDVWG 209
D K N +P IT+ ++ G
Sbjct: 345 DAK--GNLIPQFQNITLVNIRG 364
>gi|265754983|ref|ZP_06089897.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513278|ref|ZP_08792800.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229437102|gb|EEO47179.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|263234594|gb|EEZ20173.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 523
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
F P +I + + ++I +I + FWNI+P+ C NV+IR VT+ + P+ DG+D
Sbjct: 212 FFAPKVIAPVQCKDVLIEGMIIERCMFWNINPILCENVIIRGVTVNS-VGIPSGDGVDIT 270
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
S NV +E ++ GDD A+K G +E G G + + IR + G+ GSET
Sbjct: 271 CSKNVLVEYCTMNCGDDCYAIKGGRNEEGARMGISAENVIIRNCLAKAGHGGLTTGSETG 330
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENA 173
GG++N+ A + + + KT R G NI + ++N
Sbjct: 331 GGIKNIYAYNCVFDGTDMPLRFKTRRPRTGITENIFYERLRIKNV 375
>gi|242088669|ref|XP_002440167.1| hypothetical protein SORBIDRAFT_09g027150 [Sorghum bicolor]
gi|241945452|gb|EES18597.1| hypothetical protein SORBIDRAFT_09g027150 [Sorghum bicolor]
Length = 408
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 20/262 (7%)
Query: 3 RQRTLPFT---RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
R++T P RP + F R + + V QN+ + + CS V ++ ++APADS
Sbjct: 146 RKKTQPCYSGPRPKAVHFEECRGVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVIAPADS 205
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
PNTDGI + +S+V I D+ ISTGDD V++ S + ++ ++ P
Sbjct: 206 PNTDGIHLNDTSHVHITDNLISTGDDCVSMVGN-----------CSDVHVKDIS-CGPGH 253
Query: 120 GIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
GI++GS T+ VENV + L N G+ +K+ G GF R++ ++ M+N
Sbjct: 254 GISIGSLGKNRTTDMVENVRVDTCLLTNTTNGVRIKSWQGGMGFARDLRFENILMKNVSN 313
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNI 234
I + D P N V + ++ GT + ++ P + L+N+
Sbjct: 314 PIIVDQYYCDQPTPCANQTQAVEVRKVEFANIRGTSATAQAISIACSDTVPCRELELANV 373
Query: 235 NLQGVAGPTSPPLKCSDVSGSA 256
NL G C SG +
Sbjct: 374 NLTLAEGGGRATALCYRASGKS 395
>gi|300727868|ref|ZP_07061247.1| polygalacturonase (pectinase) family [Prevotella bryantii B14]
gi|299774852|gb|EFI71465.1| polygalacturonase (pectinase) family [Prevotella bryantii B14]
Length = 1030
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 7/255 (2%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPD 68
+ RP +I F + +V F+N FW +H +Y + + I A P++DGID D
Sbjct: 776 YGRPKVICFNRCDGGELRDVAFRNQSFWCLHILYTHGFTVHGIRIDAEDYIPSSDGIDID 835
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SS+ + I DS+I DD +++KSG G + I I G+A+GSE S
Sbjct: 836 SSTGISITDSHIKAYDDCISIKSGKGVDGRRINQYAGQIKIENCHFDYGHGGVAIGSEVS 895
Query: 129 GGVENVLAEHINLYNVGVG-IHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
G +++VL + ++ I K+ RGG I NIT ++ + A+ I +
Sbjct: 896 GDIKDVLVANCDMKGENWNPIRFKSQPSRGGVIENITFDNIAIAKAQNMISVQMAWRMKG 955
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPL 247
+D+ + L + I I+++ GT +G+I+G ++P I I + PL
Sbjct: 956 EDEPAYSPLTQLKNIVIRNITGT-ADNAGVIEGYPDAP---IKRDAIRFENCLIKVKKPL 1011
Query: 248 --KCSDVSGSAYQVK 260
K +DV S + K
Sbjct: 1012 MIKNADVDLSGFTCK 1026
>gi|357462815|ref|XP_003601689.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
gi|355490737|gb|AES71940.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
Length = 400
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 119/273 (43%), Gaps = 28/273 (10%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
W + RP ++F+ ++ + + +SP +I V C+ +I ++ I+AP +SPN
Sbjct: 144 WWKNYNDHGRPTALQFLGCDNLKLGPLRHIDSPKNHISIVDCNGALISHLHIIAPENSPN 203
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGID S+N+ IE S ISTGDD +A+ SG S I I + P GI
Sbjct: 204 TDGIDISRSTNIIIEHSTISTGDDCIAINSG-----------SKFINITAIN-CGPGHGI 251
Query: 122 AVGSETSGG----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
+VGS G VE V H G +KT G+ R IT D+ + I
Sbjct: 252 SVGSLGKDGKYATVEEVHVSHSIFTGTENGARIKTWTAGTGYARKITYEDITLIKVNNPI 311
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDV-----WGTKVQQSGLIQGLKNSPFTGICLS 232
I D D + V G+ + DV GT ++ + T I L
Sbjct: 312 II-----DQHYDALESVSDSVRKGVKVSDVTFRGFRGTANEKDAIELNCARIGCTNIVLE 366
Query: 233 NINLQGVAGPTSPPLKCSDVSGSAYQVKP-WPC 264
NIN+ G+ G P C++V GS P PC
Sbjct: 367 NINIAGLGGE-KPSASCNNVQGSCSSCNPNVPC 398
>gi|2459817|gb|AAC28906.1| polygalacturonase 5 [Solanum lycopersicum]
Length = 387
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 126/267 (47%), Gaps = 29/267 (10%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q+ P L F NS +I+++ VI QNS ++I C N +I+ V +LAP +SPNTD
Sbjct: 134 QKNCPIGTTAL-AFYNSNNIVMNGVIVQNSQMFHILVDGCHNAMIQGVKVLAPGNSPNTD 192
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSG----WDEYGIAYGHPSSGITIRRVTGSSPFS 119
GI SSS V I +S I TGDD +++ G W E GIA G P
Sbjct: 193 GIHVQSSSGVSIRNSNIGTGDDCISIGPGNSNLWIE-GIACG---------------PGH 236
Query: 120 GIAVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIG-RGGFIRNITVSDVYMENAR 174
GI++GS GV+NV + + G+ VKT GF+R++ + M N +
Sbjct: 237 GISIGSLGWESKEQGVQNVTVKTVTFTGTQNGVRVKTWARPSSGFVRHVLFQHIVMSNVQ 296
Query: 175 KGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSN 233
I I + + + + + ++ +T +D+ GT + + + K +P +GI L N
Sbjct: 297 NPIIIDQNYCPNHESCPHQGSGVKISDVTYQDIHGTSATEVAVKLDCSKTNPCSGITLDN 356
Query: 234 INLQGVAGPTSPPLKCSDVSGSAYQVK 260
+NL G C + +G A K
Sbjct: 357 VNLSYKNGRAES--SCVNAAGKASGFK 381
>gi|317047820|ref|YP_004115468.1| glycoside hydrolase family protein [Pantoea sp. At-9b]
gi|316949437|gb|ADU68912.1| glycoside hydrolase family 28 [Pantoea sp. At-9b]
Length = 447
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 15/237 (6%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP L+E N S I N+ NSP WN+ ++ I +T+ P+ +PNTDGID SS
Sbjct: 172 RPWLVEMNNVTSSEIHNIRLTNSPMWNLVLRNSQHLKIDQLTVDNPSTAPNTDGIDIVSS 231
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
S++ I+ + ISTGDD +A+KSG G S I I+ GI++GSET G
Sbjct: 232 SDILIKHADISTGDDHIAIKSG---ISAGSGVKSENIAIQDSVMRQGH-GISLGSETING 287
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI-------AGDV 183
+ V H+ G+ VK+ RG I + V V M + + + AG
Sbjct: 288 IGKVTVSHVRFVGAENGLRVKSGRDRGNKIGPLQVDHVTMTDVATPLLVTDSYSGQAGAA 347
Query: 184 GDHPDDKFNPNAL----PVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
G + PV++GI + + T + + ++ GL +P T + L +I +
Sbjct: 348 GHALIAPIAAAPVTPTTPVISGIEVNHLAATGAKYAMILSGLPEAPVTDVRLRHIAI 404
>gi|365122655|ref|ZP_09339556.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642403|gb|EHL81761.1| hypothetical protein HMPREF1033_02902 [Tannerella sp.
6_1_58FAA_CT1]
Length = 427
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 120/240 (50%), Gaps = 25/240 (10%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVY---CSNVVIRYVTILAPADSPNTDGIDP 67
R LI F N R+I I + QN+P N+H S++ +R +TI AP ++PN+DGID
Sbjct: 159 RGCLIRFDNCRNIEICGIRLQNAP--NVHITLGRGSSDITVRDITIEAPDEAPNSDGIDV 216
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSET 127
+ NV I + I+ GDD +A+ SG + ITIR+ + G ++GS T
Sbjct: 217 -WAPNVLIYNCNIACGDDNIAMDSG-----------TKNITIRKCNFGNGH-GCSIGSYT 263
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
+G +ENVL + + N I +K+N RGG +NI S++ ++N RK I I P
Sbjct: 264 AG-IENVLVDSCSFKNTESAIRMKSNRSRGGGEKNIIYSNITIDNVRKPIFITSYYPKTP 322
Query: 188 DDKFNPNALPVV------NGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAG 241
D +A V N I ++++ + +G+I G+ P + N+ ++ G
Sbjct: 323 KDVTEDSAEEVTVTTPSWNNIFLRNIEIYDCEYAGIIWGVPELPIRNVVFDNVKIRATKG 382
>gi|356503131|ref|XP_003520365.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase
At3g15720-like [Glycine max]
Length = 472
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 116/262 (44%), Gaps = 22/262 (8%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
W ++ P RP+++ + S+ ++N+ NSP +IH C ++ I AP DSPN
Sbjct: 224 WACKSCP--RPSVLIINSCNSVSVTNLNMINSPKSHIHVNGCEGATFSHINISAPGDSPN 281
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDG D +S N+ IEDS I+TGDD +A+ G SS I + + P GI
Sbjct: 282 TDGFDISTSKNIMIEDSTIATGDDCIAISGG-----------SSYINVTGI-ACGPGHGI 329
Query: 122 AVGS--ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
++GS + V+ V + + G +KT G+ + IT D+ +E R I I
Sbjct: 330 SIGSLGKKFDTVQEVYVRNCSFIRTTNGARIKTFPNGMGYAKQITFEDITLEQTRNPIII 389
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ D + V+ +T + + GT + + S GI L IN+
Sbjct: 390 DQEYRDLTNQAVE------VSDVTYRGIHGTSLDGRAITLDCGESGCYGIVLDQINIVSC 443
Query: 240 AGPTSPPLKCSDVSGSAYQVKP 261
S C++ G+A P
Sbjct: 444 LTGKSASCFCNNAHGTATATNP 465
>gi|255523559|ref|ZP_05390527.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296186479|ref|ZP_06854882.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
gi|255512816|gb|EET89088.1| glycoside hydrolase family 28 [Clostridium carboxidivorans P7]
gi|296048926|gb|EFG88357.1| polygalacturonase (pectinase) [Clostridium carboxidivorans P7]
Length = 532
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 1 MW-RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADS 59
+W ++ + RPNL+ N +S+++ F+NSP +NI N+++R I +
Sbjct: 205 VWPNKQVVNVKRPNLLNLSNCKSVLLDGPSFENSPQFNIDINSSENLIVRNTKIFNEYWA 264
Query: 60 PNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFS 119
NTDGID + NV I + ++TGDD + +KSG + I +
Sbjct: 265 QNTDGIDISACKNVLIYNDTVNTGDDGICMKSGSSSKSNNDEPTLENVVIENCIVNHAHG 324
Query: 120 GIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
G VGS T GG++N+ + N G+ K++IG GG + +I + + M+N +
Sbjct: 325 GFVVGSNTDGGMKNIYVHNCNYIGTDSGLRFKSDIGNGGKVEDIYIDGINMKNIVNDAIV 384
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ + N +P I I +V+ Q++ I+GL P + L NI ++
Sbjct: 385 FDTNYEAKNTNNTSNKVPNFQNIHISNVFCDGAQEAANIKGLDAVPVKNLDLKNITIKST 444
Query: 240 AG 241
G
Sbjct: 445 NG 446
>gi|325106411|ref|YP_004276065.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975259|gb|ADY54243.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 476
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL--APADSPNTDGIDPD 68
RP I NS+++ I ++ Q + FW + VY S V + +TI P+TDG+D D
Sbjct: 186 RPRTILVSNSKNVTIKDLNIQQAGFWTVQVVYSSYVTVDGLTINNNVGGHGPSTDGVDID 245
Query: 69 SSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETS 128
SSS + ++++ I DD +K+G D G+ P + IR + +GSETS
Sbjct: 246 SSSWILVQNTDIDCNDDNFCIKAGRDADGLRVNRPCEYVVIRDCVARKGGGLLTLGSETS 305
Query: 129 GGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYME 171
GG+ N+ A +I +++K+ + RGGF+ N+ + +V M+
Sbjct: 306 GGIRNIYASNIKGMATSNCLNIKSAVTRGGFVENVLLENVTMD 348
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 31/260 (11%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP LI +S ++++ V +SP +++ Y +V + IL+P +PNTD IDP S
Sbjct: 170 RPRLIYIKSSSNVLVDGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDPIDS 229
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ I ++YI DD +A+K+ + G + + GI++GSETSGG
Sbjct: 230 QNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQG--RGISIGSETSGG 287
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG--------- 181
V NVL E+ GI +KT G+GG ++NIT + M + + A
Sbjct: 288 VNNVLVENNQFEGSMYGIRIKTLRGKGGEVKNITYRNTKMVDVEIPLVFAAYYKAAPIVQ 347
Query: 182 ------------DVGDH-------PDDKFNPNALPVVNGITIKDVWGT-KVQQSGLIQGL 221
+G+ P+ F+ + P + +TI+++ T K + + I G+
Sbjct: 348 AEVDKMLAEGGFTMGEQIYPSDTDPEQPFDQHKTPHFSNVTIENLESTGKTKAAAYIIGV 407
Query: 222 KNSPFTGICLSNINLQGVAG 241
+P +G N+ + G
Sbjct: 408 PEAPLSGFHFDNVRIDADKG 427
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F +++++ SPFW IH C ++R + + A N DGID + S
Sbjct: 207 RPHLIHFNRCKNVLLDGFKICESPFWTIHLYMCDGGLVRNLDV--KAHGHNNDGIDFEMS 264
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G ++ P I IR + + +GSE SGG
Sbjct: 265 RNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTLLGIGSEISGG 324
Query: 131 VENVLAEHINLYN-VGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ N+ N V VKTN RGGFI N+ + +V A++ ++I +V
Sbjct: 325 IRNIYMHDCTAPNSVMRLFFVKTNHRRGGFIENVYMKNVKAGTAQRVLEIDTEV 378
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP+LI F ++++ + + SPFW IH C+ ++R + + A N DGID + +
Sbjct: 200 RPHLIHFNRCENVLLDSFKIRESPFWTIHMYMCNGGIVRNLDV--KAHGHNNDGIDLEMT 257
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N +ED GDD V +K+G + P+ I IR + + +GSE SGG
Sbjct: 258 RNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCNILEGHTLLGIGSEISGG 317
Query: 131 VENVLAEHINL-YNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ NV + +V VKTN RG F+ NI + ++ + ++ ++I DV
Sbjct: 318 IRNVYMHDCKVPQSVRRLFFVKTNHRRGAFVENIHMENIRTGHVQRVLEIDTDV 371
>gi|356503135|ref|XP_003520367.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 452
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 116/262 (44%), Gaps = 22/262 (8%)
Query: 2 WRQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
W ++ P RP+++ + S+ ++N+ NSP +IH C ++ I AP DSPN
Sbjct: 204 WACKSCP--RPSVLIINSCNSVSVTNLNMINSPKSHIHVNGCEGATFSHINISAPGDSPN 261
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDG D +S N+ IEDS I+TGDD +A+ G SS I + + P GI
Sbjct: 262 TDGFDISTSKNIMIEDSTIATGDDCIAISGG-----------SSYINVTGI-ACGPGHGI 309
Query: 122 AVGS--ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
++GS + V+ V + + G +KT G+ + IT D+ +E R I I
Sbjct: 310 SIGSLGKKFDTVQEVYVRNCSFIRTTNGARIKTFPNGMGYAKQITFEDITLEQTRNPIII 369
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGV 239
+ D + V+ +T + + GT + + S GI L IN+
Sbjct: 370 DQEYRDLTNQAVE------VSDVTYRGIHGTSLDGRAITLDCGESGCYGIVLDQINIVSC 423
Query: 240 AGPTSPPLKCSDVSGSAYQVKP 261
S C++ G+A P
Sbjct: 424 LTGKSASCFCNNAHGTATATNP 445
>gi|18400876|ref|NP_566524.1| polygalacturonase [Arabidopsis thaliana]
gi|75311636|sp|Q9LW07.1|PGLR3_ARATH RecName: Full=Probable polygalacturonase At3g15720; Short=PG;
AltName: Full=Pectinase At3g15720; Flags: Precursor
gi|11994344|dbj|BAB02303.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332642197|gb|AEE75718.1| polygalacturonase [Arabidopsis thaliana]
Length = 456
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 132/276 (47%), Gaps = 22/276 (7%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 69
+RP ++F + ++ +S + +SP +IH C+ V I + I AP SPNTDGID +
Sbjct: 136 SRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGA 195
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
SSNV I+D I+TGDD +A+ SG I SGI P GI++GS
Sbjct: 196 SSNVVIQDCIIATGDDCIAINSGTSNIHI------SGID------CGPGHGISIGSLGKD 243
Query: 130 G----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG--DV 183
G VENV ++ N G +KT G G+ R IT + + ++N I I +
Sbjct: 244 GETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNG 303
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 242
GD + K ++ V+ + + GT + G+ + + P T I L ++ ++ +
Sbjct: 304 GDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSG 363
Query: 243 TSPPL--KCSDVSGSAYQVKP-WPCSELSSSQQTGA 275
+ +C +V G++ P C ELS+ + A
Sbjct: 364 SGQVAQGQCLNVRGASTIAVPGLECLELSTDMFSSA 399
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,715,688,625
Number of Sequences: 23463169
Number of extensions: 209619174
Number of successful extensions: 451033
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2486
Number of HSP's successfully gapped in prelim test: 1216
Number of HSP's that attempted gapping in prelim test: 443929
Number of HSP's gapped (non-prelim): 4305
length of query: 280
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 140
effective length of database: 9,074,351,707
effective search space: 1270409238980
effective search space used: 1270409238980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)