BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023585
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7PZL3|PGLR_VITVI Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001
PE=1 SV=1
Length = 491
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 181/283 (63%), Gaps = 7/283 (2%)
Query: 1 MWRQR----TLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAP 56
+W QR L +TRP LIE M S I ISN+ NSP WN+HPVY N++I+ +TILAP
Sbjct: 184 LWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAP 243
Query: 57 ADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSS 116
SPNTDGI+PDS +N IED YI +GDD VAVKSGWDEYGIAYG P+ + IRR+T S
Sbjct: 244 VRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCIS 303
Query: 117 PFSG-IAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARK 175
P+S IA+GSE SGG+++V AE I N GI +KT IGRGG++++I V + M+ +
Sbjct: 304 PYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKW 363
Query: 176 GIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNIN 235
+ G+ G H D+ ++P A PV+ GI +D+ V + ++G+ + PFTGIC+SN+
Sbjct: 364 AFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVT 423
Query: 236 LQGVAGPTSPPLKCSDVSGSAYQVKPWPCSELSSS--QQTGAC 276
+ A P C+DV G + V P PCS L ++T C
Sbjct: 424 IHLAAKAKKVPWTCTDVEGISSGVTPTPCSTLPDQGPEKTSLC 466
>sp|P27644|PGLR_RHIRD Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1
Length = 312
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 30 FQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 89
+N+ W IHP C ++ TI+AP DSPNTDG +P+S NV I S GDD +AV
Sbjct: 40 IRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAV 99
Query: 90 KSGWDEYGIAYGH--PSSGITIRRVTGSSPFSGIAVGSETSGGVENVLAEHINLYNVGVG 147
K+G H + GIT+R G+ +GSE SGGV +V E ++ G
Sbjct: 100 KAGKRGPDGEDDHLAETRGITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRG 159
Query: 148 IHVKTNIGR-GGFIRNITVSDVYMENARKGIKIAG----DVGDHPD--DKFNP----NAL 196
+ +KT GG + NIT+ V ++ + + D H D NP +
Sbjct: 160 LRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDDWVQSRNPAPVNDGT 219
Query: 197 PVVNGITIKDVWGTKV-QQSGLIQGLKNSP 225
P V+GIT++DV + +G+ GL + P
Sbjct: 220 PFVDGITVEDVEIRNLAHAAGVFLGLPDVP 249
>sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana
GN=At3g15720 PE=1 SV=1
Length = 456
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 132/276 (47%), Gaps = 22/276 (7%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDS 69
+RP ++F + ++ +S + +SP +IH C+ V I + I AP SPNTDGID +
Sbjct: 136 SRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGA 195
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
SSNV I+D I+TGDD +A+ SG I SGI P GI++GS
Sbjct: 196 SSNVVIQDCIIATGDDCIAINSGTSNIHI------SGID------CGPGHGISIGSLGKD 243
Query: 130 G----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAG--DV 183
G VENV ++ N G +KT G G+ R IT + + ++N I I +
Sbjct: 244 GETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNG 303
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGP 242
GD + K ++ V+ + + GT + G+ + + P T I L ++ ++ +
Sbjct: 304 GDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSG 363
Query: 243 TSPPL--KCSDVSGSAYQVKP-WPCSELSSSQQTGA 275
+ +C +V G++ P C ELS+ + A
Sbjct: 364 SGQVAQGQCLNVRGASTIAVPGLECLELSTDMFSSA 399
>sp|Q8RY29|ADPG2_ARATH Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2
Length = 433
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 19/242 (7%)
Query: 3 RQRTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
R + P T+ P + F NS+S+I+ N+ +N+ I CSNV + V + APADSPN
Sbjct: 182 RNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPN 241
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGI ++ N+ + +S I TGDD ++++SG S + I +T P GI
Sbjct: 242 TDGIHITNTQNIRVSESIIGTGDDCISIESG-----------SQNVQINDIT-CGPGHGI 289
Query: 122 AVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
++GS + V V + L G+ +KT G G NI ++ M+N + I
Sbjct: 290 SIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPI 349
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 236
I D D +A+ V N + +D+ GT ++ + KN P GI L +N+
Sbjct: 350 IIDQDYCDKSKCTTEKSAVQVKN-VVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI 408
Query: 237 QG 238
+G
Sbjct: 409 KG 410
>sp|Q7M1E7|PGLR2_CHAOB Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1
Length = 514
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 20/252 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+ S+S+ + + NSP +++ C V I+ + I AP DSPNTDGID +S
Sbjct: 182 RPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFAS 241
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----E 126
IE I TGDD +A+ +G SS ITI+ + P GI++GS
Sbjct: 242 KRFHIEKCVIGTGDDCIAIGTG-----------SSNITIKDLI-CGPGHGISIGSLGRDN 289
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
+ V +V + G+ +KT G G IT +V M N+ I I
Sbjct: 290 SRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTS 349
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSP 245
N + + G+T K++ GT + + +S P TGI LSN++L+ +G
Sbjct: 350 ASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVSLKLTSG---K 406
Query: 246 PLKCSDVSGSAY 257
P C D + +
Sbjct: 407 PASCVDKNARGF 418
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 17/246 (6%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P + F+ ++ +SN+ +N+ ++ C NV + + +PADSPNTDGI +
Sbjct: 193 PTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQ 252
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ET 127
N+ I+DS + TGDD +++ SG + ++GIT P GI++GS +
Sbjct: 253 NILIQDSIVRTGDDCISIVSGSENV------RATGIT------CGPGHGISIGSLGEDNS 300
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
V NV+ L G+ +KT G G +NI D+ M+N I I D D
Sbjct: 301 EAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRV 360
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPP 246
+ + V+ + K++ GT + + KN P GI + N+ L
Sbjct: 361 EACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSK 420
Query: 247 LKCSDV 252
CS+V
Sbjct: 421 ASCSNV 426
>sp|Q9FY19|PGLR2_JUNAS Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1
Length = 507
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+ S+S+ + + NSP +++ C V I+ + I AP DSPNTDGID +S
Sbjct: 183 RPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFAS 242
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
IE I TGDD VAV +G SS ITI+ +T P G+++GS G
Sbjct: 243 KRFEIEKCTIGTGDDCVAVGTG-----------SSNITIKDLT-CGPGHGMSIGSLGKGN 290
Query: 131 ----VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDH 186
V V + + G+ +KT G G +IT +V M NA I I
Sbjct: 291 SRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTS 350
Query: 187 PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSP 245
N + + +T K++ GT + + +S P + I LSN+ L+ +G +
Sbjct: 351 AAACKNQRSAVKIQDVTFKNIHGTSATTAAIQLMCSDSVPCSNIKLSNVFLKLTSGKVA- 409
Query: 246 PLKCSDVSGSAYQVKP 261
C + + + Y P
Sbjct: 410 --TCVNKNANGYYTNP 423
>sp|Q02096|PGLR_PERAE Polygalacturonase OS=Persea americana PE=2 SV=1
Length = 462
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 19/256 (7%)
Query: 3 RQRTLPF-TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPN 61
R+++LP + P + F + +++I+S++ ++S ++ C +V+ + + AP SPN
Sbjct: 196 RKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPN 255
Query: 62 TDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGI 121
TDGI + + + +S I TGDD ++++SG S + I P GI
Sbjct: 256 TDGIHITGTQRIHVMNSVIGTGDDCISIESG------------SKMVIATNITCGPGHGI 303
Query: 122 AVGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
++GS + V VL + NL++ G+ +KT G G +NI ++ M N I
Sbjct: 304 SIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPI 363
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 236
I D D + V+ + ++ GT + + K+SP G + NINL
Sbjct: 364 IIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGYIVGNINL 423
Query: 237 QGVAGPTSPPLKCSDV 252
G G + + CS++
Sbjct: 424 VGNGGKET-TMSCSNI 438
>sp|P43212|PGLR2_CRYJA Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1
Length = 514
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
RP I+F S +II + NSP +++ C V I ++I AP DSPNTDGID +S
Sbjct: 182 RPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFAS 241
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N ++ + I TGDD VA+ +G SS I I + P GI++GS G
Sbjct: 242 KNFHLQKNTIGTGDDCVAIGTG-----------SSNIVIEDLI-CGPGHGISIGSL---G 286
Query: 131 VENVLAE----HIN---LYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
EN AE H+N + G+ +KT G G +I +V M N+ I I
Sbjct: 287 RENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFY 346
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGP 242
N + + +T K++ GT + + +S P I LS+I+L+ +G
Sbjct: 347 CTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDISLKLTSGK 406
Query: 243 TSPPL 247
+ L
Sbjct: 407 IASCL 411
>sp|P05117|PGLR_SOLLC Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1
Length = 457
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 21/282 (7%)
Query: 5 RTLPFT-RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
++LP P + F N +++ ++N+ +N+ +I C+NVV + I A A SPNTD
Sbjct: 190 KSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTD 249
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+ ++ + I D+ I TGDD +++ SG S + +T P GI++
Sbjct: 250 GVHVSNTQYIQISDTIIGTGDDCISIVSG-----------SQNVQATNIT-CGPGHGISI 297
Query: 124 GSETSGGVE----NVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GS SG E NV + G+ +KT G G NI +V M++ + I I
Sbjct: 298 GSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIII 357
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQG 238
+ D + + V + +++ GT + + N P GI + NINL G
Sbjct: 358 DQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSATKVAIKFDCSTNFPCEGIIMENINLVG 417
Query: 239 VAGPTSPPLKCSDVS-GSAYQVKPWPCSELSSSQQTGACSNH 279
+G S C +V +A V P C+ L S+ N+
Sbjct: 418 ESGKPSEA-TCKNVHFNNAEHVTP-HCTSLEISEDEALLYNY 457
>sp|O22818|PGLR6_ARATH Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana
GN=At2g43860 PE=2 SV=1
Length = 405
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 117/255 (45%), Gaps = 22/255 (8%)
Query: 17 FMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIE 76
F S +I IS + NS ++I +NV I V + A +SPNTDGI +SS +V I
Sbjct: 158 FSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHIT 217
Query: 77 DSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVE 132
+S I TGDD +++ G I TIR P GI++GS E GV+
Sbjct: 218 NSRIGTGDDCISIGPGSTNVFIQ--------TIR----CGPGHGISIGSLGRAEEEQGVD 265
Query: 133 NVLAEHINLYNVGVGIHVKT-NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPDDKF 191
NV +++ G+ +KT F RNI + M+ + I I H
Sbjct: 266 NVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPCPK 325
Query: 192 NPNALPVVNGITIKDVWGT-KVQQSGLIQGLKNSPFTGICLSNINLQGVAGPTSPPLKCS 250
+ + V N + +D+ GT + + L+ K P TGI + ++NL V P C
Sbjct: 326 QESGVKVSN-VRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQA--SCD 382
Query: 251 DVSGSAYQVKPW-PC 264
+ +GSA V P+ PC
Sbjct: 383 NANGSANDVVPFTPC 397
>sp|O23147|ADPG1_ARATH Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1
Length = 431
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 5 RTLPFTR-PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
++ P T+ P + N +++ + N+ +N+ I C+ V + V I AP DSPNTD
Sbjct: 184 KSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTD 243
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GI ++ N+ + +S I TGDD ++++ G + + I +T P GI++
Sbjct: 244 GIHITNTQNIRVSNSDIGTGDDCISIEDG-----------TQNLQIFDLT-CGPGHGISI 291
Query: 124 GS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKI 179
GS + V + + G+ +KT G G +NI ++ MEN + I I
Sbjct: 292 GSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIII 351
Query: 180 AGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQG 238
D D + +A+ V N + K++ GT + + + P GI L N+ ++G
Sbjct: 352 DQDYCDKDKCEDQESAVQVKN-VVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKIKG 410
>sp|P58598|PGLR_RALSO Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000)
GN=pglA PE=3 SV=1
Length = 531
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 47/208 (22%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV---IRYVT------- 52
+ + L P L++ N + + V QNSP ++I + V I+ VT
Sbjct: 198 KTKGLNQQNPRLVQLYNGSAFTLYRVTVQNSPNFHIVTTGTAGVTAWGIKIVTPSLAYTV 257
Query: 53 ------------------ILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 94
P NTDG DP S+NV + +SYISTGDD VA+K+
Sbjct: 258 PGYKCAAGTTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLANSYISTGDDHVAIKA--- 314
Query: 95 EYGIAYGHPSSGITIRRVTGSSPF---SGIAVGSETSGGVENV----LAEHINLYNVGVG 147
S G T + + F G+++GSET GGV N+ LA N + G G
Sbjct: 315 ---------SGGATRNLLFAHNHFYYGHGLSIGSETDGGVSNMQVTDLAMDGNDSSGGNG 365
Query: 148 IHVKTNIGRGGFIRNITVSDVYMENARK 175
+ +K++I RGG + NI + + M N ++
Sbjct: 366 LRIKSDISRGGKVNNIVYNGICMRNVKE 393
>sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium carotovorum subsp.
carotovorum GN=peh PE=3 SV=1
Length = 402
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN--VVIRYVTILAPADSP 60
+ + L P LI+ S++ + NV NSP N H V+ TI P+ +
Sbjct: 168 KVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTAR 225
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKS--GWDE-YGIAYGHPSSGITIRRVTGSSP 117
NTDGIDP SS N+ I S ISTGDD VA+K+ G E I+ H G TG
Sbjct: 226 NTDGIDPMSSKNITIAHSNISTGDDNVAIKAYKGRSETRNISILHNEFG------TG--- 276
Query: 118 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
G+++GSET GV NV + + + G+ +K++ G + + S+V M+N K I
Sbjct: 277 -HGMSIGSETM-GVYNVTVDDLIMTGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPI 334
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDV 207
I D +K + +P + IT KD+
Sbjct: 335 VI-----DTVYEKKEGSNVPDWSDITFKDI 359
>sp|P26509|PGLR2_PECSS Endo-polygalacturonase OS=Pectobacterium sp. (strain SCC3193)
GN=pehA PE=1 SV=1
Length = 402
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSN--VVIRYVTILAPADSP 60
+ + L P LI+ S++ + NV NSP N H V+ TI P+ +
Sbjct: 168 KVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTAR 225
Query: 61 NTDGIDPDSSSNVCIEDSYISTGDDLVAVKS---GWDEYGIAYGHPSSGITIRRVTGSSP 117
NTDGIDP SS N+ I S I+TGDD VA+K+ + I+ H G TG
Sbjct: 226 NTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFG------TG--- 276
Query: 118 FSGIAVGSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGI 177
G+++GSET GV NV + + + G+ +K++ G + + S+V M+N K I
Sbjct: 277 -HGMSIGSETM-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPI 334
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDV 207
I D +K + +P + IT KDV
Sbjct: 335 VI-----DTVYEKKEGSNVPDWSDITFKDV 359
>sp|P48978|PGLR_MALDO Polygalacturonase OS=Malus domestica PE=2 SV=1
Length = 460
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVY--CSNVVIRYVTILAPADSPNTDGIDPDS 69
P + F ++++ N+ Q++ IH ++ C NV +T+ AP DSPNTDGI +
Sbjct: 220 PTAVTFNRCNNLVVKNLNIQDAQ--QIHVIFQNCINVQASCLTVTAPEDSPNTDGIHVTN 277
Query: 70 SSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSG 129
+ N+ I S I TGDD +++ SG S + +T P GI++GS
Sbjct: 278 TQNITISSSVIGTGDDCISIVSG-----------SQRVQATDIT-CGPGHGISIGSLGED 325
Query: 130 GVEN----VLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
G E+ V L G+ +KT G G NI +V M + I I + D
Sbjct: 326 GSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIVFQNVQMNDVTNPIIIDQNYCD 385
Query: 186 H--PDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQ 237
H D K +A+ V N + +++ GT + S P GI L ++ LQ
Sbjct: 386 HKTKDCKQQKSAVQVKN-VLYQNIRGTSASGDAITLNCSQSVPCQGIVLQSVQLQ 439
>sp|P20041|PGLR_RALSL Polygalacturonase OS=Ralstonia solanacearum GN=pglA PE=1 SV=1
Length = 529
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 47/208 (22%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVV--------------- 47
+ + L P LI+ N + + V QNSP ++I S V
Sbjct: 196 KTKGLNQQNPRLIQTYNGSAFTLYGVTVQNSPNFHIVTTGTSGVTAWGIKIVTPSLAYAV 255
Query: 48 -------------IRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 94
+ T P NTDG DP S+NV + SYI+TGDD VAVK+
Sbjct: 256 AGYKCPSGSTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLAYSYINTGDDHVAVKA--- 312
Query: 95 EYGIAYGHPSSGITIRRVTGSSPF---SGIAVGSETSGGVENVLAEHINL----YNVGVG 147
SSG T + + F G+++GSET+ GV N+L + + + G G
Sbjct: 313 ---------SSGPTRNLLFAHNHFYYGHGLSIGSETNTGVSNMLVTDLTMDGNDSSAGNG 363
Query: 148 IHVKTNIGRGGFIRNITVSDVYMENARK 175
+ +K++ RGG + NI + M N ++
Sbjct: 364 LRIKSDASRGGKVTNIVYDGICMRNVKE 391
>sp|P35338|PGLR2_MAIZE Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1
Length = 410
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 14 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 73
+++F+N+ + S V NS F++++ C N++I+ VT+ AP DSPNTDGI SS +
Sbjct: 165 VMDFVNNGEV--SGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 74 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSG 129
I ++ I GDD +++ G + I +G+T P GI++GS +
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNI------TGVT------CGPGHGISIGSLGRYKDEK 270
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP-- 187
V ++ + L G+ +K +TVS ++ EN IK+ +P
Sbjct: 271 DVTDINVKDCTLKKTMFGVRIKAYEDAASV---LTVSKIHYEN----IKMEDSA--NPIF 321
Query: 188 -DDKFNPNALPVVNG--------ITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 237
D K+ PN L NG +T K++ GT + + P TG + ++N++
Sbjct: 322 IDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAISLLCTAKVPCTGATMDDVNVE 381
Query: 238 GVAGPTSPPLKCSDVSGS 255
C++ GS
Sbjct: 382 YSGTNNKTMAICTNAKGS 399
>sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana
GN=At1g80170 PE=1 SV=1
Length = 444
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 23/280 (8%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P + F +++ + N+ +S +I C V I + ++APA SPNTDGI S
Sbjct: 177 PTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSR 236
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVG----SET 127
+ I+++ +STGDD +++ S+ I+I + P GI++G S++
Sbjct: 237 GIVIDNTTVSTGDDCISIVKN-----------STQISISNII-CGPGHGISIGSLGKSKS 284
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
V ++ + + + G+ +KT G G + I ++ M N I I D
Sbjct: 285 WEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSR 344
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPP 246
N + + I+ V GT + + I +SP I L +I+L+ G
Sbjct: 345 KPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTE 404
Query: 247 LKCSDVSGSAY-QVKPWPC-----SELSSSQQTGACSNHF 280
C + GS+ QV P PC S L S Q+G S +
Sbjct: 405 SFCWEAYGSSSGQVYPPPCLSDDTSFLEQSVQSGITSAYL 444
>sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1
Length = 410
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 14 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 73
+++F+N+ + S V NS F++++ C +++I+ VT+ AP DSPNTDGI SS +
Sbjct: 165 VMDFVNNGEV--SGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 74 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSG 129
I ++ I GDD +++ G + I +G+T P GI++GS +
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNI------TGVT------CGPGHGISIGSLGRYKDEK 270
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP-- 187
V ++ + L G+ +K +TVS ++ EN IK+ +P
Sbjct: 271 DVTDINVKDCTLKKTMFGVRIKAYEDAASV---LTVSKIHYEN----IKMEDSA--NPIF 321
Query: 188 -DDKFNPNALPVVNG--------ITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 237
D K+ PN L NG +T K++ GT + + P TG+ + ++N++
Sbjct: 322 IDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVE 381
Query: 238 GVAGPTSPPLKCSDVSGS 255
C++ GS
Sbjct: 382 YSGTNNKTMAICTNAKGS 399
>sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100
PE=2 SV=1
Length = 475
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 8 PFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDP 67
P P +I F S +I + + QNSP +++ C V+I + I +P SPNTDGI
Sbjct: 206 PCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHL 265
Query: 68 DSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS-- 125
++ +V I +S +S GDD +++ +G S + I+ VT P GI++GS
Sbjct: 266 GNTRSVGIYNSVVSNGDDCISIGTG-----------CSDVDIQGVT-CGPSHGISIGSLG 313
Query: 126 --ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV 183
+ V N+ + + + G+ VKT G G + N+ ++ MEN I +
Sbjct: 314 VHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYY 373
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGT 210
D + +A+ V + + +++ GT
Sbjct: 374 CQSKDCRNETSAVKVFD-VEYRNIKGT 399
>sp|P35336|PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1
Length = 467
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 18/247 (7%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
P + F S+ +I+ N+ +N+ ++ C NV + + AP +SPNTDGI +
Sbjct: 211 PTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQ 270
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ET 127
N+ I I TGDD +++ +G S + + +T P GI++GS +
Sbjct: 271 NIHISSCVIGTGDDCISIVNG-----------SRKVRVNDIT-CGPGHGISIGSLGYGNS 318
Query: 128 SGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP 187
V +V+ L G+ +KT G G NI +V M N I I + D
Sbjct: 319 EAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQD 378
Query: 188 DDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPP 246
++ V + +++ GT + K P GI L +++L+ G +
Sbjct: 379 KPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAAAKA 438
Query: 247 LKCSDVS 253
L C++V
Sbjct: 439 L-CNNVE 444
>sp|Q39766|PGLR_GOSBA Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1
Length = 407
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 30/275 (10%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R P I F + +I ++ ++S ++I+ C N+ + + I AP +SPNT
Sbjct: 140 ENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNT 199
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DGI S V I S I TGDD +++ G + + I+ +T P GI+
Sbjct: 200 DGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKNMVIKEIT-CGPGHGIS 247
Query: 123 VGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGR-GGFIRNITVSDVYMENARKGI 177
+GS + VE + + + N G +KT G GG + I D+ M N I
Sbjct: 248 IGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPI 307
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK-----NSPFTGICLS 232
I K N + ++ I+ K++ GT S L + +K +SP + L+
Sbjct: 308 LIDQQYCPWNKCKKNEESKVKLSNISFKNIRGT----SALPEAIKFICSGSSPCQNVELA 363
Query: 233 NINLQ--GVAGPTSPPLKCSDVSGSAYQVKPWPCS 265
+I++Q G TS L + + ++ P PCS
Sbjct: 364 DIDIQHNGAEPATSQCLNVKPI--TIGKLNPIPCS 396
>sp|P35339|PGLR3_MAIZE Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1
Length = 410
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 39/259 (15%)
Query: 14 LIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNV 73
+++F+N+ + S + NS F++++ C +++I+ V + AP DSPNTDGI SS V
Sbjct: 165 VMDFVNNGEV--SGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 222
Query: 74 CIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSG 129
I ++ I GDD +++ G + I +G+T P GI++GS +
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNI------TGVT------CGPGHGISIGSLGRYKDEK 270
Query: 130 GVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHP-- 187
V ++ + L G+ +K +T S ++ EN IK+ D G +P
Sbjct: 271 DVTDINVKDCTLKKTANGVRIKAYEDAASV---LTASKIHYEN----IKME-DSG-YPII 321
Query: 188 -DDKFNPNALPVVNG--------ITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQ 237
D K+ PN L NG +T K++ GT + + P TG+ + ++N++
Sbjct: 322 IDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIK 381
Query: 238 GVAGPTSPPLKCSDVSGSA 256
C + GSA
Sbjct: 382 YSGTNNKTMAVCKNAKGSA 400
>sp|Q39786|PGLR_GOSHI Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1
Length = 407
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 30/275 (10%)
Query: 3 RQRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT 62
R P I F + +I ++ ++S ++I+ C N+ + + I AP +SPNT
Sbjct: 140 ENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNT 199
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DGI S V I S I TGDD +++ G + + I+ +T P GI+
Sbjct: 200 DGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKNMVIKEIT-CGPGHGIS 247
Query: 123 VGS----ETSGGVENVLAEHINLYNVGVGIHVKTNIGR-GGFIRNITVSDVYMENARKGI 177
+GS + VE + + + N G +KT G GG + I D+ M N I
Sbjct: 248 IGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPI 307
Query: 178 KIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLK-----NSPFTGICLS 232
I K N + ++ I+ K++ GT S L + +K +SP + L+
Sbjct: 308 LIDQQYCPWNKCKKNEESKVKLSNISFKNIRGT----SALPEAIKFICSGSSPCQNVELA 363
Query: 233 NINLQ--GVAGPTSPPLKCSDVSGSAYQVKPWPCS 265
+I+++ G TS L ++ ++ P PCS
Sbjct: 364 DIDIKHNGAEPATSQCLNVKPITSG--KLNPIPCS 396
>sp|Q40312|PGLR_MEDSA Polygalacturonase OS=Medicago sativa PE=2 SV=1
Length = 421
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 27/239 (11%)
Query: 24 IISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTG 83
I+ V ++S +++ C N+ TI AP DSPNTDGI S++V I ++ I TG
Sbjct: 159 IVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTG 218
Query: 84 DDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGGVENVLAEHI 139
DD V++ G S IT++ V P G++VGS T VE + ++
Sbjct: 219 DDCVSIGDG-----------SKQITVQGVN-CGPGHGLSVGSLGKFTTEENVEGITVKNC 266
Query: 140 NLYNVGVGIHVKTNIGRGGFI--RNITVSDVYMENARKGIKIAGDVGDHP---DDKFNPN 194
L G+ +KT G I +I D+ M N + + I D +P K NP+
Sbjct: 267 TLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVII--DQEYYPWNQCSKKNPS 324
Query: 195 ALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINLQGVAGPTSPPLKCSDV 252
+ ++ I+ K+V GT G++ ++ P G+ L+N++L+ PT+ KC++V
Sbjct: 325 KIK-LSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGAPTT--AKCTNV 380
>sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3
PE=2 SV=1
Length = 422
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 26/239 (10%)
Query: 4 QRTLPFTRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTD 63
Q LP P ++F N +++ I+ + N+ +++ V NV I+ + + APA+SPNTD
Sbjct: 164 QCNLP---PTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTD 220
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
GI ++ NV I DS I+TGDD V+V G S+ +T+ RV P G++V
Sbjct: 221 GIHLSNADNVSILDSTIATGDDCVSV-----------GRGSNNVTVERVI-CGPGHGLSV 268
Query: 124 GSETS-GGVENVLAEHIN---LYNVGVGIHVKTNIGRG-GFIRNITVSDVYMENARKGIK 178
GS E+V H+N + G+ +KT G +I ++ M++ + I
Sbjct: 269 GSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPII 328
Query: 179 IAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL 236
I + G D + ++ I K++ GT + + + I K+ P G+ + ++NL
Sbjct: 329 IDQNYGSRGGD-----SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNL 382
>sp|P48979|PGLR_PRUPE Polygalacturonase OS=Prunus persica PE=2 SV=1
Length = 393
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 15 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 74
+ F +S +I++S + NS ++I NV ++ V + +SPNTDGI SS V
Sbjct: 150 LGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVT 209
Query: 75 IEDSYISTGDDLVAVKSG----WDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----E 126
I +S I+TGDD V++ G W E G+A G P GI++GS +
Sbjct: 210 ILNSKIATGDDCVSIGPGTSNLWIE-GVACG---------------PGHGISIGSLGKEQ 253
Query: 127 TSGGVENVLAEHINLYNVGVGIHVKTNIGR--GGFIRNITVSDVYMENARKGIKIAGDVG 184
GV+NV + + G+ +K+ GR GF RNI M N I I D
Sbjct: 254 EEAGVQNVTVKTVTFSGTQNGLRIKS-WGRPSTGFARNILFQHATMVNVENPIVI--DQH 310
Query: 185 DHPDDKFNPNALP--VVNGITIKDVWGTKVQQ 214
PD+K P + ++ +T +D+ GT +
Sbjct: 311 YCPDNKGCPGQVSGVQISDVTYEDIHGTSATE 342
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 30/244 (12%)
Query: 12 PNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSS 71
PN + F + + I ++ +S ++++ C N+ + APA+SPNTDGI SS
Sbjct: 141 PNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSS 200
Query: 72 NVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG- 130
+V I DS STGDD ++V G + + I RVT P GI+VGS GG
Sbjct: 201 SVNITDSNFSTGDDCISV-----------GDETEQLYITRVT-CGPGHGISVGS--LGGN 246
Query: 131 -----VENVLAEHINLYNVGVGIHVKT-NIGRGGFIRNITVSDVYMENARKGIKIAGDVG 184
V V + N G+ +KT G + ++ D+ ++N + I D
Sbjct: 247 PDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVI--DQV 304
Query: 185 DHPDDKFNPNALP---VVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL--QG 238
P +K N + LP ++ ++ +++ GT Q + + K P GI + +I++ G
Sbjct: 305 YCPFNKCNKD-LPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSG 363
Query: 239 VAGP 242
GP
Sbjct: 364 KEGP 367
>sp|P49063|PGLR2_ARATH Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana
GN=At3g07850 PE=1 SV=2
Length = 444
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 23/263 (8%)
Query: 15 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 74
I F + I+++ NS ++++ + C N+ + + I AP +S NTDGI S+ V
Sbjct: 192 IRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVN 251
Query: 75 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGG 130
+ + I TGDD V++ G + I P GI++GS
Sbjct: 252 LIGAKIKTGDDCVSIGDGTENL------------IVENVECGPGHGISIGSLGRYPNEQP 299
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGR-GGFIRNITVSDVYMENARKGIKIAGDVGDHPDD 189
V+ V + N G+ +KT G G NI D+ M+N + I + +
Sbjct: 300 VKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHC 359
Query: 190 KFNPNALPVVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINL--QGVAGPTSPP 246
K + ++ +TIK + GT + + + K P T I LS+INL G GP
Sbjct: 360 KAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVS- 418
Query: 247 LKCSDVSG-SAYQVKPWPCSELS 268
CS++ + ++ P C+E++
Sbjct: 419 -ACSNIKPILSGKLVPAACTEVA 440
>sp|Q27UB1|PGXB_ASPNG Exopolygalacturonase B OS=Aspergillus niger GN=pgxB PE=3 SV=1
Length = 438
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 36/266 (13%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFW-----NIHPVYCSNVVIRYVTILAPADSPNTD 63
F RP L N+ I + + NSP W + V NV I + A +D NTD
Sbjct: 175 FYRPILFLTDNATRISVEGITQLNSPCWTNFFVRTNDVSFDNVYIHAFSTNASSDPANTD 234
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D V + I GDD + K P++ + + G+++
Sbjct: 235 GMDSLDVDGVSFTNMRIDVGDDCFSPK------------PNTTNIFVQNMWCNNTHGVSM 282
Query: 124 GS--ETSGG---VENVLAEHINLYNVGVGIHVKTNIGRG---GFIRNITVSDVYMENARK 175
GS + +G +ENV E++ L N G +K G+ G I N+T ++ ++N
Sbjct: 283 GSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAWAGQDVGYGRINNVTYKNIQIQNTDA 342
Query: 176 GIKIAG---DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSP---FTG 228
I + D+ K+ P+A+ + N I +++WG+ + G ++ L SP T
Sbjct: 343 PIVLDQCYFDINATECAKY-PSAVNITN-ILFENIWGSSSGKDGKIVADLVCSPDAVCTN 400
Query: 229 ICLSNINLQGVAGPTSPPLKCSDVSG 254
I LSN+NL G + + C D+ G
Sbjct: 401 ITLSNVNLTSPKG--TAEIVCDDIQG 424
>sp|A2QHG0|PGXB_ASPNC Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgxB PE=3 SV=1
Length = 438
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 36/266 (13%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSPFW-----NIHPVYCSNVVIRYVTILAPADSPNTD 63
F RP L N+ I + + NSP W + V NV I + A +D NTD
Sbjct: 175 FYRPILFLTDNATRISVEGITQLNSPCWTNFFVRTNDVSFDNVYIHAFSTNASSDPANTD 234
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G+D V + I GDD + K P++ + + G+++
Sbjct: 235 GMDSLDVDGVSFTNMRIDVGDDCFSPK------------PNTTNIFVQNMWCNNTHGVSM 282
Query: 124 GS--ETSGG---VENVLAEHINLYNVGVGIHVKTNIGRG---GFIRNITVSDVYMENARK 175
GS + +G +ENV E++ L N G +K G+ G I N+T ++ ++N
Sbjct: 283 GSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAWAGQDVGYGRINNVTYKNIQIQNTDA 342
Query: 176 GIKIAG---DVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSG-LIQGLKNSP---FTG 228
I + D+ K+ P+A+ + N I +++WG+ + G ++ L SP T
Sbjct: 343 PIVLDQCYFDINATECAKY-PSAVNITN-ILFENIWGSSSGKDGKIVADLVCSPDAVCTN 400
Query: 229 ICLSNINLQGVAGPTSPPLKCSDVSG 254
I LSN+NL G + + C D+ G
Sbjct: 401 ITLSNVNLTSPKG--TAEIVCDDIQG 424
>sp|Q6H9K0|PGLR2_PLAAC Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2
PE=1 SV=1
Length = 377
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 15 IEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVC 74
+ F + ++ ++ NS ++I+ + C ++ ++VT+ AP S NTDGI S V
Sbjct: 131 LRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVT 190
Query: 75 IEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS----ETSGG 130
I ++ I+TGDD +++ G S +TI +V P GI++GS
Sbjct: 191 ITNTKIATGDDCISIGPG-----------SQNVTITQVN-CGPGHGISIGSLGRYNNEKE 238
Query: 131 VENVLAEHINLYNVGVGIHVKT-NIGRGGFIRNITVSDVYMENARKGIKIAGDVGDHPD- 188
V + + G+ VKT G ++T D+ M N + + + + +
Sbjct: 239 VRGITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQC 298
Query: 189 DKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNS-PFTGICLSNINL--QGVAGPTSP 245
+ P+ + + N I ++ GT + ++ + P + + + INL +G GP +
Sbjct: 299 SRQAPSRIKLSN-INFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATS 357
Query: 246 PLKCSDV--SGSAYQVKPWPCS 265
CS+V + S QV C+
Sbjct: 358 --TCSNVKPTFSGKQVPAIKCA 377
>sp|P47180|PGLR_YEAST Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PGU1 PE=1 SV=1
Length = 361
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 26/210 (12%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI-LAPADSP---NTDGID 66
+P ++ + + ++ + +N+P CS++ I +TI + DS NTDG D
Sbjct: 123 KPKFVKLALTGTSKVTGLNIKNAPHQVFSINKCSDLTISDITIDIRDGDSAGGHNTDGFD 182
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWD-EYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
SSSNV I+ + DD +AV SG ++ Y + GI++ V G S +
Sbjct: 183 VGSSSNVLIQGCTVYNQDDCIAVNSGSTIKFMNNYCYNGHGISVGSVGGRSDNT------ 236
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDV-- 183
V AE+ ++ N G+ +KT G G + N+ ++ N GIK G V
Sbjct: 237 -----VNGFWAENNHVINSDNGLRIKTVEGATGTVTNVN----FISNKISGIKSYGIVIE 287
Query: 184 GDHPDDKFNPNA---LPVVNGITIKDVWGT 210
GD+ + K A +P+ N + +KD+ G+
Sbjct: 288 GDYLNSKTTGTATGGVPISN-LVMKDITGS 316
>sp|P35337|PGLR_BRANA Polygalacturonase OS=Brassica napus PE=2 SV=1
Length = 397
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 23/238 (9%)
Query: 25 ISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSSSNVCIEDSYISTGD 84
I +V ++ ++ + + N+ + I+APA+SPNTDGI V I ++ I+TGD
Sbjct: 151 IKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGD 210
Query: 85 DLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG----VENVLAEHIN 140
D ++V G + I +V P GI+VGS G V ++ ++
Sbjct: 211 DCISVGDGM-----------KNLLIEKVV-CGPGHGISVGSLGRYGWEQDVTDITVKNCT 258
Query: 141 LYNVGVGIHVKT--NIGRGGFIRNITVSDVYMENARKGIKIAGDVGD-HPDDKFNPNALP 197
L G+ +KT + I D+ + I I + + +K P+ +
Sbjct: 259 LEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIK 318
Query: 198 VVNGITIKDVWGTKVQQSGL-IQGLKNSPFTGICLSNINLQGVAGPTSPP-LKCSDVS 253
+V+ IT +++ GT + + + K P + + +IN++ GP PP +C++V+
Sbjct: 319 LVD-ITFRNIRGTSENKDAVKLLCSKGHPCENVEIGDINIE-YTGPDGPPTFECTNVT 374
>sp|B8NG16|PGLRX_ASPFN Probable exopolygalacturonase X OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=pgaX PE=3 SV=1
Length = 433
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 43/246 (17%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL----APADSPNTDGID 66
RP L+ + I + + SP W S+V+ + I + ++ NTDG D
Sbjct: 166 RPILVGIIGLHGGTIGPLKLRYSPQWYQLVANSSDVLFDGIDISGYSSSENEAKNTDGWD 225
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS- 125
SSN+ I++S I+ GDD V+ K P+S + + + GI+VGS
Sbjct: 226 TYRSSNIVIQNSVINNGDDCVSFK------------PNSTEILVQNLHCNGSHGISVGSL 273
Query: 126 -ETSGG---VENVLAEHINLYNV----------GVGIHVKTNIGRG---GFIRNITVSDV 168
+ G V+NVL +I++YN G+ + ++ G G ++NIT +
Sbjct: 274 GQYQGEVDIVQNVLVYNISMYNASDMARIKVWPGISSAMSEDLQGGGGLGSVQNITYDKM 333
Query: 169 YMENARKGIKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTG 228
Y+EN I++ G N N + +TI DV+ + +G+ G KN P G
Sbjct: 334 YIENVDWAIEVTQCYGQKNQTLCNENP----SNLTISDVYFNDL--TGVTSG-KNDPNVG 386
Query: 229 --ICLS 232
IC S
Sbjct: 387 TIICSS 392
>sp|P26215|PGLR_COCCA Polygalacturonase OS=Cochliobolus carbonum GN=PGN1 PE=3 SV=1
Length = 364
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP---NTDGI 65
T+P + + IS + +N+P + + + +TI A DS NTD
Sbjct: 125 TKPKFFYAHSLTTSSISGLNIKNTPVQAFSINGVTGLTLDRITIDNSAGDSAGAHNTDAF 184
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
D SSS + I ++ I DD VA+ SG D + +T + +G S +VG
Sbjct: 185 DIGSSSGITISNANIKNQDDCVAINSGSDIH----------VTNCQCSGGHGVSIGSVGG 234
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGD-V 183
V+ V+ + N G+ +KT G G + +IT ++ ++N A+ GI I D +
Sbjct: 235 RKDNTVKGVVVSGTTIANSDNGVRIKTISGATGSVSDITYENITLKNIAKYGIVIEQDYL 294
Query: 184 GDHPDDKFNPNALPVVNGITIKDVWGT 210
P K P + G+T+K+V G+
Sbjct: 295 NGGPTGK--PTTGVPITGVTLKNVAGS 319
>sp|A1DLC1|PGLRX_NEOFI Probable exopolygalacturonase X OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaX
PE=3 SV=2
Length = 432
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL----APADSPNTDGID 66
RP L + + I + + SP W S+V+ + I + ++ NTDG D
Sbjct: 168 RPILFGIIGLKGGTIGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWD 227
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS- 125
S N+ I++S I+ GDD V+ K P+S I + + GI+VGS
Sbjct: 228 TYRSDNIVIQNSVINNGDDCVSFK------------PNSTNIIVQNLHCNGSHGISVGSL 275
Query: 126 -ETSGG---VENVLAEHINLYNVGVGIHVKT-----------NIGRGGF--IRNITVSDV 168
+ G V+NVL +I++YN G +K G GG ++NIT + +
Sbjct: 276 GQYKGEVDIVQNVLVYNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNITYNQM 335
Query: 169 YMENARKGIKIA 180
Y+EN I++
Sbjct: 336 YIENVDWAIEVT 347
>sp|Q0CGP0|PGLRX_ASPTN Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=pgaX PE=3 SV=1
Length = 434
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 38/228 (16%)
Query: 8 PFT-RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNT---- 62
P T RP L+ + I + + SP W ++V+ + I + S NT
Sbjct: 164 PLTLRPILLGVIGLHGGTIGPLKLRYSPQWYQLVANSTDVLFDGIDISGYSSSKNTAKNT 223
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DG D SSN+ I++S ++ GDD V+ K P+S + + + GI+
Sbjct: 224 DGWDTYRSSNIVIQNSVVNNGDDCVSFK------------PNSTDILVQNMHCNGSHGIS 271
Query: 123 VGS--ETSGG---VENVLAEHINLYNV----------GVGIHVKTNI---GRGGFIRNIT 164
VGS + G V+N+L +I++YN GV + ++ G G + NIT
Sbjct: 272 VGSLGQYKGEIDIVKNILVYNISMYNASDMARIKVWPGVDSALSEDLQGGGGSGAVSNIT 331
Query: 165 VSDVYMENARKGIKIAGDVGDHPDDKFN--PNALPVVNGITIKDVWGT 210
+Y+EN I++ G N P+ L + + + IK++WGT
Sbjct: 332 YDRMYIENVDWAIEVTQCYGQKNQTLCNQYPSNLTISD-VHIKNMWGT 378
>sp|B0Y9F8|XGHA_ASPFC Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=xghA PE=3
SV=2
Length = 406
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 24/247 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSP-FWNIHPVYCSNVVIRYVTILAPADS----PNTD 63
+ RP L+ +I +S + +N P +N +V + + + A ++S NTD
Sbjct: 148 YKRPTLLYITGGSNIEVSGLRQKNPPNVFNSVKGDTQHVTFKNLRMDATSNSQNPPKNTD 207
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G D +S++V I ++ DD VA K G S+ +T+ VT + GI+V
Sbjct: 208 GFDIGASTHVTISSVSVTNDDDCVAFKPG-----------SNYVTVEDVTCTGSH-GISV 255
Query: 124 GSETSGG---VENVLAEHINLYNVGVGIHVKTNIGRGGF----IRNITVSDVYMENARKG 176
GS G V+N+LA IN+ +KT G ++N+T SD +
Sbjct: 256 GSLGKSGTDVVQNILAHRINMIESTKAAGIKTYPSGNGHGLSTVKNVTFSDFNVRGCDYA 315
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+I G+ + ++ GI +K GT + + N G C +++
Sbjct: 316 FQIESCYGESESYCESNPGNAILQGIVVKGFSGTTSGKYDPVVANLNCGARGTCDVSMSA 375
Query: 237 QGVAGPT 243
V P+
Sbjct: 376 FSVKAPS 382
>sp|Q4WCZ8|PGLRX_ASPFU Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaX
PE=3 SV=2
Length = 432
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL----APADSPNTDGID 66
RP L + + I + + SP W S+V+ + I + ++ NTDG D
Sbjct: 168 RPILFGVIGLKGGTIGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWD 227
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS- 125
S N+ I++S I+ GDD V+ K P+S + + + GI+VGS
Sbjct: 228 TYRSDNIVIQNSVINNGDDCVSFK------------PNSTNILVQNLHCNGSHGISVGSL 275
Query: 126 -ETSGG---VENVLAEHINLYNVGVGIHVKT-----------NIGRGGF--IRNITVSDV 168
+ G V+NVL +I++YN G +K G GG ++N+T + +
Sbjct: 276 GQYKGEVDIVQNVLVYNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNVTYNQM 335
Query: 169 YMENARKGIKIA 180
Y+EN I++
Sbjct: 336 YIENVDWAIEVT 347
>sp|B0YDE8|PGLRX_ASPFC Probable exopolygalacturonase X OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgaX PE=3 SV=2
Length = 432
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL----APADSPNTDGID 66
RP L + + I + + SP W S+V+ + I + ++ NTDG D
Sbjct: 168 RPILFGVIGLKGGTIGPLKLRYSPQWYQLVANSSDVIFDGIDISGYSSSKNEAKNTDGWD 227
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS- 125
S N+ I++S I+ GDD V+ K P+S + + + GI+VGS
Sbjct: 228 TYRSDNIVIQNSVINNGDDCVSFK------------PNSTNILVQNLHCNGSHGISVGSL 275
Query: 126 -ETSGG---VENVLAEHINLYNVGVGIHVKT-----------NIGRGGF--IRNITVSDV 168
+ G V+NVL +I++YN G +K G GG ++N+T + +
Sbjct: 276 GQYKGEVDIVQNVLVYNISMYNASDGARIKVWPGVSSAMSEDLQGGGGLGSVKNVTYNQM 335
Query: 169 YMENARKGIKIA 180
Y+EN I++
Sbjct: 336 YIENVDWAIEVT 347
>sp|P15922|PEHX_ERWCH Exo-poly-alpha-D-galacturonosidase OS=Erwinia chrysanthemi GN=pehX
PE=1 SV=1
Length = 602
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 15/255 (5%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSPNTDGIDPDSS 70
R +L+ ++ I++V +N I + NVV V I ++ N DG++ +S
Sbjct: 323 RSSLVTLRGVQNAYIADVTIRNPANHGIMFLESENVVENSV-IHQTFNANNGDGVEFGNS 381
Query: 71 SNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGSETSGG 130
N+ + +S TGDD + +G + PS + + +GS T G
Sbjct: 382 QNIMVFNSVFDTGDDSINFAAGMGQ-DAQKQEPSQNAWLFNNFFRHGHGAVVLGSHTGAG 440
Query: 131 VENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVGDHPDD 189
+ +VLAE+ + VG+ K+ GG I + M+N A++ + + D+
Sbjct: 441 IVDVLAENNVITQNDVGLRAKSAPAIGGGAHGIVFRNSAMKNLAKQAVIVTLSYADNNGT 500
Query: 190 -KFNPNALPV------VNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINLQGVAGP 242
+ P +P V +T++D G+ K+ + SN+ L GV+
Sbjct: 501 IDYTPAKVPARFYDFTVKNVTVQDSTGSNPAIEITGDSSKDIWHSQFIFSNMKLSGVS-- 558
Query: 243 TSPPLKCSDVSGSAY 257
P SD+S S +
Sbjct: 559 ---PTSISDLSDSQF 570
>sp|A2RAY7|RGXC_ASPNC Putative galacturan 1,4-alpha-galacturonidase C OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=rgxC PE=2 SV=1
Length = 423
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 45/209 (21%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPA-DSP-------NT 62
RP F N +I+ + ++ P W+++ + +N+ + A A D+P NT
Sbjct: 148 RPMPFVFWNVSEVIVDSFYVKDPPLWSVNIMNGTNMRFNNIYCNATAVDAPWGDNWVQNT 207
Query: 63 DGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIA 122
DG D ++N+ + + GDD +A+K S I I+ VT +GIA
Sbjct: 208 DGFDTMDATNIQLTNFVYQGGDDCIAIKP-----------RSYNIDIQNVTCRGG-NGIA 255
Query: 123 VGS----ETSGGVENVLAEHINLYNVGVGIH----VKTNIG--------------RG--- 157
+GS V N+ + +N+ +H +KT +G RG
Sbjct: 256 IGSLGQYLEDSSVANIRVDKVNIIRYNEDMHNSAYLKTWVGALVPQSSYESAGVPRGDGW 315
Query: 158 GFIRNITVSDVYMENARKGIKIAGDVGDH 186
G IRN+ S+ ++ A G I+ D GD+
Sbjct: 316 GSIRNVLFSNFNVQGASAGPSISQDSGDN 344
>sp|Q5ATQ3|PGLR_EMENI Endopolygalacturonase AN8327 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN8327
PE=1 SV=1
Length = 380
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 20/213 (9%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTILAPADSP----NTDGI 65
T+P + I N+ +N+P + C + I +TI A NTDG
Sbjct: 137 TKPKFFYAHDLTDSTIQNLYIENTPVQAVSINGCDGLTITDMTIDNSAGDDAGGHNTDGF 196
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIR--RVTGSSPFSGIAV 123
D SSNV I + + DD VAV SG + IT +G S +V
Sbjct: 197 DIGESSNVVITGAKVYNQDDCVAVNSG------------TSITFSGGTCSGGHGLSIGSV 244
Query: 124 GSETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGD 182
G V+ V + + N GI +K G G I+ +T S + +E+ + GI I +
Sbjct: 245 GGRDDNTVDTVTFKDSTVSNSVNGIRIKAKSGETGEIKGVTYSGISLESISDYGILIEQN 304
Query: 183 VGDHPDDKFNPNALPVVNGITIKDVWGTKVQQS 215
D + +P+ + +TI+++ G+ S
Sbjct: 305 YDGGDLDGEVTSGIPITD-LTIENISGSGAVDS 336
>sp|O93883|PGLR_PENGR Polygalacturonase OS=Penicillium griseoroseum GN=PGG1 PE=3 SV=1
Length = 376
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI-LAPADS---PNTDGI 65
T+P + + I N+ +NSP + + +T+ A DS NTD
Sbjct: 137 TKPKFFYAHSLTNSKIENIYIKNSPVQVFSINGAKELTLSGITVDTADGDSNGGHNTDAF 196
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
D SS+ V I + DD +AV SG + + T + TG S +VG
Sbjct: 197 DVGSSNGVYITSPIVHNQDDCLAVNSGTNVH----------FTGAQCTGGHGISIGSVGG 246
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMEN-ARKGIKIAGDVG 184
+ V+ V E + + G+ +KT G G ++ +T D+ + A+ GI I D
Sbjct: 247 RSDNTVDGVTVESCTIKDSDNGVRIKTVYGATGTVQGVTYKDITLSGIAKYGIVIEQDYE 306
Query: 185 DHPDDKFNPNALPVVNGITIKDVWGTKVQQSGL 217
+ + +P+ + +T+ +V GT V SG+
Sbjct: 307 NGSPTGTPTSGVPITD-LTLDNVHGT-VASSGV 337
>sp|Q4WBT4|XGHA_ASPFU Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=xghA PE=3 SV=2
Length = 406
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 24/247 (9%)
Query: 9 FTRPNLIEFMNSRSIIISNVIFQNSP-FWNIHPVYCSNVVIRYVTILAPADS----PNTD 63
+ RP L+ +I +S + +N P +N +V + + + A ++S NTD
Sbjct: 148 YKRPTLLYITGGSNIEVSGLRQKNPPNVFNSVKGDTQHVTFKNLRMDATSNSQNPPKNTD 207
Query: 64 GIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAV 123
G D +S++V I ++ DD VA K G S+ +T+ VT + GI+V
Sbjct: 208 GFDIGASTHVTISSVSVTNDDDCVAFKPG-----------SNYVTVEDVTCTGSH-GISV 255
Query: 124 GSETSGG---VENVLAEHINLYNVGVGIHVKTNIGRGGF----IRNITVSDVYMENARKG 176
GS G V+N+LA I + +KT G ++N+T SD +
Sbjct: 256 GSLGKSGPDVVQNILAHRITMIESTKAAGIKTYPSGNGHGLSTVKNVTFSDFNVRGCDYA 315
Query: 177 IKIAGDVGDHPDDKFNPNALPVVNGITIKDVWGTKVQQSGLIQGLKNSPFTGICLSNINL 236
+I G+ + ++ GI +K GT + + N G C +++
Sbjct: 316 FQIESCYGESESYCESNPGNAILQGIVVKGFSGTTSGKYDPVVANLNCGARGTCDVSMSA 375
Query: 237 QGVAGPT 243
V P+
Sbjct: 376 FSVKAPS 382
>sp|Q5ASG9|PGLX1_EMENI Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgaX-1
PE=1 SV=1
Length = 434
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 28/189 (14%)
Query: 11 RPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTI----LAPADSPNTDGID 66
RP L + I + + SP W S+V+ + I + ++ NTDG D
Sbjct: 168 RPILFGVIGLHGGTIGPLKLRYSPQWYQLVANSSDVLFDGIDISGYSKSENEAKNTDGWD 227
Query: 67 PDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIA--YGHPSSGITIRRVTGSSPFSGIAVG 124
S N+ I++S I+ GDD V+ K E + Y + S GI++ + G +G
Sbjct: 228 TYRSKNIVIQNSVINNGDDCVSFKPNSTEILVQNLYCNGSHGISVGSL-------GQYIG 280
Query: 125 SETSGGVENVLAEHINLYNV----------GVGIHVKTNIGRG---GFIRNITVSDVYME 171
V+NVL +I++YN GV + ++ G G + NIT D+Y+E
Sbjct: 281 EVDI--VKNVLVYNISMYNASDMARIKVWPGVASAMSEDLQGGGGLGSVSNITYEDMYIE 338
Query: 172 NARKGIKIA 180
N I+I
Sbjct: 339 NVDWAIEIT 347
>sp|Q9P4W4|PGLRA_ASPNG Endopolygalacturonase A OS=Aspergillus niger GN=pgaA PE=1 SV=1
Length = 370
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL-APADSP---NTDGI 65
T+P + IS + +N+P I V N+VI VTI + DS NTDG
Sbjct: 130 TKPKFFYAHDLDDSKISGLYIKNTPVQAIS-VESDNLVIEDVTIDNSDGDSEGGHNTDGF 188
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
D S+ + I + + DD VA+ SG + Y SG T +G S +VG
Sbjct: 189 DISESTYITITGATVKNQDDCVAINSGENIY-------FSGGT---CSGGHGLSIGSVGG 238
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
V+NV + + G+ +KT G + +IT S++ + GI G V +
Sbjct: 239 RDDNTVKNVTFIDSTVSDSENGVRIKTVYDATGTVEDITYSNIQL----SGISDYGIVIE 294
Query: 186 HPDDKFNPNALPVVNGITIKDV 207
+ +P P NG+TI DV
Sbjct: 295 QDYENGDPTGTP-SNGVTISDV 315
>sp|A2R8F8|PGLRA_ASPNC Probable endopolygalacturonase A OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgaA PE=3 SV=1
Length = 370
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 10 TRPNLIEFMNSRSIIISNVIFQNSPFWNIHPVYCSNVVIRYVTIL-APADSP---NTDGI 65
T+P + IS + +N+P I V N+VI VTI + DS NTDG
Sbjct: 130 TKPKFFYAHDLDDSKISGLYIKNTPVQAIS-VESDNLVIEDVTIDNSDGDSEGGHNTDGF 188
Query: 66 DPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGHPSSGITIRRVTGSSPFSGIAVGS 125
D S+ + I + + DD VA+ SG + Y SG T +G S +VG
Sbjct: 189 DISESTYITITGATVKNQDDCVAINSGENIY-------FSGGT---CSGGHGLSIGSVGG 238
Query: 126 ETSGGVENVLAEHINLYNVGVGIHVKTNIGRGGFIRNITVSDVYMENARKGIKIAGDVGD 185
V+NV + + G+ +KT G + +IT S++ + GI G V +
Sbjct: 239 RDDNTVKNVTFIDSTVSDSENGVRIKTVYDATGTVEDITYSNIQL----SGISDYGIVIE 294
Query: 186 HPDDKFNPNALPVVNGITIKDV 207
+ +P P NG+TI DV
Sbjct: 295 QDYENGDPTGTP-SNGVTISDV 315
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,699,483
Number of Sequences: 539616
Number of extensions: 4924379
Number of successful extensions: 10969
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 10761
Number of HSP's gapped (non-prelim): 186
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)