BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023586
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/282 (79%), Positives = 242/282 (85%), Gaps = 16/282 (5%)
Query: 12 ASIGAKEMLGNPLNVSSAVRTSAPGASNPSTFKPVALFSKKKAAPPAKSKPVAVSPVNEE 71
AS+G EMLG PLN + R+SAP AS+PSTFK VALFSKKK A +K AVS ++E
Sbjct: 2 ASLGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPA---PAKSKAVSETSDE 58
Query: 72 LAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHA 131
LAKWYGPDRRIFLP+GLLDRSEIPEYL GEV GDYGYDPFGL KKP++F+KYQA+ELIHA
Sbjct: 59 LAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHA 118
Query: 132 RWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAE 191
RWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV AV+AE
Sbjct: 119 RWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAE 178
Query: 192 IV-------------LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 238
+V LD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNGRLAMFAMLG
Sbjct: 179 VVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLG 238
Query: 239 FFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 280
FF+QAYVTGEGPVENLAKHLSDPF NNLLTVI+G AERAPTL
Sbjct: 239 FFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 142/236 (60%), Gaps = 22/236 (9%)
Query: 50 SKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYD 109
S KA +++ ++ V ++YGPDR FL G ++ PEYLTGE PGDYG+D
Sbjct: 8 SGLKALNIRQTRQQRMATVPRAAVEFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWD 65
Query: 110 PFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD 169
GLS P F++Y+ ELIHARWA+LGA G + PE +++ E VWFK GA +
Sbjct: 66 TAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFA 125
Query: 170 GNTLNYFG-------KNIPINLVFAVI-------------AEIVLDLEDKLHPGGPFDPL 209
LNY G ++I L V+ +E LD D L+PGGPFDPL
Sbjct: 126 DGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPL 185
Query: 210 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GLA DPD FA LKVKEIKNGRLAMF+ LGFF+QA VTG+GPV+NL HL+DP N
Sbjct: 186 GLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNK 241
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/265 (46%), Positives = 157/265 (59%), Gaps = 30/265 (11%)
Query: 19 MLGNPLNVSSAVRTSAPGASNPSTFKPVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGP 78
M + +SS V A +++ + F + +K AA P KP A S + WYG
Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKP---KPAASSG-----SPWYGA 52
Query: 79 DRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGA 138
DR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA
Sbjct: 53 DRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 109
Query: 139 AGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVL- 194
G + PE + G G EAVWFK G+ + L+Y G I + A+ A ++VL
Sbjct: 110 LGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLM 168
Query: 195 --------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFF 240
++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF
Sbjct: 169 GAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFF 228
Query: 241 LQAYVTGEGPVENLAKHLSDPFANN 265
+QA VTG+GP+ENLA HL+DP NN
Sbjct: 229 VQAIVTGKGPLENLADHLADPVNNN 253
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 156/265 (58%), Gaps = 35/265 (13%)
Query: 20 LGNPLNVSSAVRTSAPGASNPSTFK-PVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGP 78
L +P V TSA NPS+ + A F+ +K+A +K VA S + WYGP
Sbjct: 8 LSSPTLTGKPVETSA----NPSSQELGGARFTMRKSA---TTKKVASSG-----SPWYGP 55
Query: 79 DRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGA 138
DR +L E P YLTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA
Sbjct: 56 DRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGA 112
Query: 139 AGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEIVL-- 194
G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A V+
Sbjct: 113 LGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILM 171
Query: 195 --------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFF 240
++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF
Sbjct: 172 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFF 231
Query: 241 LQAYVTGEGPVENLAKHLSDPFANN 265
+QA VTG+GP+ENLA HLSDP NN
Sbjct: 232 VQAIVTGKGPLENLADHLSDPVNNN 256
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 197 bits (502), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 132/209 (63%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 62 WYGPDRVLYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIAEI 192
MLGA G + PE + G G EAVWFK GA + L+Y G + I + A+ A
Sbjct: 119 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQ 177
Query: 193 VL----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
V+ ++ D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMF+M
Sbjct: 178 VILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSM 237
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 238 FGFFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 141/237 (59%), Gaps = 29/237 (12%)
Query: 47 ALFSKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDY 106
A + +KA + + SP WYGPDR ++L E P YLTGE PGDY
Sbjct: 37 ARVTMRKATTKKLTASASTSP-------WYGPDRVLYLGP---FSGEPPSYLTGEFPGDY 86
Query: 107 GYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL 166
G+D GLS P++F+K + E+IH RWAMLGA G + PE + G G EAVWFK GA
Sbjct: 87 GWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQ 145
Query: 167 LLDGNTLNYFGKN--IPINLVFAVIAEIVL----------------DLEDKLHPGGPFDP 208
+ L+Y G + + A+ A V+ ++ D ++PGG FDP
Sbjct: 146 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDP 205
Query: 209 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LGLA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 206 LGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 139/225 (61%), Gaps = 28/225 (12%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 40 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPE 90
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE F + G G EAVWFK G+ + L+Y G
Sbjct: 91 TFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYLGN 149
Query: 179 N--IPINLVFAVIA-EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFAL 220
+ + A+ A ++VL ++ D L+PGG FDPLGLA DP+ FA
Sbjct: 150 PSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAE 209
Query: 221 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 196 bits (498), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 132/209 (63%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 62 WYGPDRVMYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIAEI 192
MLGA G + PE + G G EAVWFK GA + L+Y G + I + A+ A
Sbjct: 119 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQ 177
Query: 193 VL----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
V+ ++ D ++PGG FDPLGLA DPD FA +KVKEIKNGRLAMF+M
Sbjct: 178 VILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSM 237
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 238 FGFFVQAIVTGKGPIENLADHLADPVNNN 266
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 196 bits (498), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 139/225 (61%), Gaps = 28/225 (12%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KP + S + WYGPDR +L E P YLTGE P DYG+D GLS P+
Sbjct: 41 KAKPASSS------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPSDYGWDTAGLSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE F + G G EAVWFK GA + L+Y G
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEGGLDYLGN 150
Query: 179 N--IPINLVFAVIA-EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFAL 220
+ + A+ A ++VL ++ D L+PGG FDPLGLA+DP+ FA
Sbjct: 151 PSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAE 210
Query: 221 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/226 (48%), Positives = 141/226 (62%), Gaps = 28/226 (12%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
+K+KPV+ S + WYGP+R +L E P YLTGE PGDYG+D GLS P
Sbjct: 40 SKAKPVSSS------SPWYGPNRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADP 90
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 177
+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKGGSQIFSQGGLDYLG 149
Query: 178 KN--IPINLVFAVIA-EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFA 219
+ + A+ A ++VL ++ D L+PGG FDPLGLA+DP+ FA
Sbjct: 150 NPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFA 209
Query: 220 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 149/246 (60%), Gaps = 31/246 (12%)
Query: 39 NPSTFK-PVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEY 97
NPS+ + A F+ +K+A +K VA S + WYGPDR +L E P Y
Sbjct: 24 NPSSQELGAARFTMRKSA---TTKKVASSG-----SPWYGPDRVKYLGP---FSGESPSY 72
Query: 98 LTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPE 157
LTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA G + PE ++ G G E
Sbjct: 73 LTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-E 131
Query: 158 AVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEIVL----------------DLEDK 199
AVWFK G+ + L+Y G + + A+ A V+ ++ D
Sbjct: 132 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP 191
Query: 200 LHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLS 259
L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+
Sbjct: 192 LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA 251
Query: 260 DPFANN 265
DP NN
Sbjct: 252 DPVNNN 257
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/226 (48%), Positives = 140/226 (61%), Gaps = 28/226 (12%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
+K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P
Sbjct: 39 SKAKPVSSG------SPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADP 89
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 177
+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 90 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLG 148
Query: 178 KN--IPINLVFAVIA-EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFA 219
+ + A+ A ++VL ++ D L+PGG FDPLGLA+DP+ FA
Sbjct: 149 NPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFA 208
Query: 220 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 137/224 (61%), Gaps = 28/224 (12%)
Query: 60 SKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDD 119
+KPVA S + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 40 AKPVASS------SPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPET 90
Query: 120 FSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN 179
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 91 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNP 149
Query: 180 --IPINLVFAVIAEIVL----------------DLEDKLHPGGPFDPLGLAKDPDQFALL 221
+ + A+ A V+ ++ D L+PGG FDPLGLA+DP+ FA L
Sbjct: 150 SLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 209
Query: 222 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 210 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 139/225 (61%), Gaps = 28/225 (12%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 40 KAKPVSSG------SPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPE 90
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 91 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGN 149
Query: 179 N--IPINLVFAVIA-EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFAL 220
+ + A+ A ++VL ++ D L+PGG FDPLGLA+DP+ FA
Sbjct: 150 PSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAE 209
Query: 221 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNN 254
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 147/241 (60%), Gaps = 22/241 (9%)
Query: 43 FKPVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEV 102
KPV S+K A A+ + +A + WYG DR ++L G S P YL+GE
Sbjct: 17 LKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL--GPFSGSP-PSYLSGEF 73
Query: 103 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFK 162
PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE K G G EAVWFK
Sbjct: 74 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFK 132
Query: 163 TGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVL---------------DLEDKLHPGG 204
G+ + L+Y G + + A+ A +++L ++ED ++PGG
Sbjct: 133 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 192
Query: 205 PFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFAN 264
FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP N
Sbjct: 193 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVN 252
Query: 265 N 265
N
Sbjct: 253 N 253
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 132/209 (63%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L +IP YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 49 WYGPDRPKYLGP---FSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE +K G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 106 MLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQ 164
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL + D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMF+M
Sbjct: 165 VVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSM 224
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 225 FGFFVQAIVTGKGPIENLFDHLADPVANN 253
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 132/209 (63%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 166
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M
Sbjct: 167 VVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSM 226
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 227 FGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 194 bits (493), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 132/209 (63%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 49 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 106 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 164
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+M
Sbjct: 165 VVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSM 224
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 225 FGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 194 bits (493), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 139/238 (58%), Gaps = 22/238 (9%)
Query: 47 ALFSKKKAAPPAK-SKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGD 105
AL K +AA A +K +P +WYGPDR +L + P YLTGE PGD
Sbjct: 10 ALTVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGP---FSTNTPAYLTGEFPGD 66
Query: 106 YGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGA 165
YG+D GLS P+ F KY+ E+IHARWA+LGA G + PE + + E VWFK GA
Sbjct: 67 YGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGA 126
Query: 166 LLLDGNTLNYFGKNIPI---NLVFAVIAEIVL---------------DLEDKLHPGGPFD 207
+ L+Y G I N+V + ++VL + D L+PG FD
Sbjct: 127 QIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFD 186
Query: 208 PLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
PLGLA DPD FA LKVKEIKNGRLAMF+ GFF+QA VTG+GP++NLA HL+DP NN
Sbjct: 187 PLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNN 244
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 194 bits (492), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 131/209 (62%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 166
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M
Sbjct: 167 VVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 226
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 227 FGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 194 bits (492), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 130/209 (62%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR FL + P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 48 WYGADRPKFLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 104
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEI 192
MLGA G I PE +K G G EAVWFK GA + L+Y G + + A+ A
Sbjct: 105 MLGALGCIFPELLSKNGVQFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQ 163
Query: 193 VLDLE----------------DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
V+ + D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M
Sbjct: 164 VVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 223
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA H++DP ANN
Sbjct: 224 FGFFVQAIVTGKGPIENLADHIADPVANN 252
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/226 (50%), Positives = 140/226 (61%), Gaps = 28/226 (12%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
AK KP A + WYG DR ++L G L E P YLTGE PGDYG+D GLS P
Sbjct: 34 AKPKPAASG------SPWYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 84
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 177
+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 85 ETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLG 143
Query: 178 KN--IPINLVFAVIA-EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFA 219
I + A+ A ++VL ++ D L+PGG FDPLGLA DP+ FA
Sbjct: 144 NPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFA 203
Query: 220 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 204 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 249
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 136/210 (64%), Gaps = 24/210 (11%)
Query: 75 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
WYGPDR P+ L SE P YLTGE PGDYG+D GLS P+ F++ + E+IH+RW
Sbjct: 47 WYGPDR----PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRW 102
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK-NI----PINLVFAV 188
AMLGA G + PE +K G G EAVWFK GA + L+Y G N+ I ++AV
Sbjct: 103 AMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAV 161
Query: 189 IAEIVLDLE-------------DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
++ +E DK++PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+
Sbjct: 162 QVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFS 221
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 222 MFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 136/210 (64%), Gaps = 24/210 (11%)
Query: 75 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
WYGPDR P+ L SE P YLTGE PGDYG+D GLS P+ F++ + E+IH+RW
Sbjct: 47 WYGPDR----PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRW 102
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK-NI----PINLVFAV 188
AMLGA G + PE +K G G EAVWFK GA + L+Y G N+ I ++AV
Sbjct: 103 AMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAV 161
Query: 189 IAEIVLDLE-------------DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
++ +E DK++PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+
Sbjct: 162 QVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFS 221
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 222 MFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 131/209 (62%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 166
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL ++ D L+PGG FDPLGLA+DP+ FA LKVK IKNGRLAMF+M
Sbjct: 167 VVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSM 226
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 227 FGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 135/209 (64%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 106 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQ 164
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL ++ D L+PGG FDPLGLA DP+ FA +KVKE+KNGRLAMF+M
Sbjct: 165 VVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSM 224
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 225 FGFFVQAIVTGKGPLENLADHLADPVNNN 253
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 129/209 (61%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEI 192
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 166
Query: 193 VL----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
V+ ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M
Sbjct: 167 VILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 226
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 227 FGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 137/225 (60%), Gaps = 28/225 (12%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 41 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGN 150
Query: 179 N--IPINLVFAVIA-EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFAL 220
+ + A+ A ++VL ++ D L+PGG FDPLGLA DP+ FA
Sbjct: 151 PSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAE 210
Query: 221 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKEIKNGRLAMF+M GFF+QA VTG+GP++NL HL+DP NN
Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNN 255
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 150/262 (57%), Gaps = 28/262 (10%)
Query: 26 VSSAVRTSAPGASNPSTFKPVALFSKKK----AAPPAKSKPVAVSPVNEELAKWYGPDRR 81
+++A + + S KPV S+K A + V+ S ++ + WYG DR
Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTI--WYGADRP 58
Query: 82 IFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGF 141
FL E P YL GE GDYG+D GLS P+ F++ + E+IHARWAMLGA G
Sbjct: 59 KFLGP---FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGC 115
Query: 142 IIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVL---- 194
+ PE K G G EAVWFK GA + L+Y G + + A+ A ++VL
Sbjct: 116 LTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 174
Query: 195 -----------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQA 243
++ D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMF+M GFF+QA
Sbjct: 175 EGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQA 234
Query: 244 YVTGEGPVENLAKHLSDPFANN 265
VTG+GP+ENL HL+DP ANN
Sbjct: 235 IVTGKGPLENLNDHLADPVANN 256
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 134/225 (59%), Gaps = 28/225 (12%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 41 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE F + G G EAVW K G+ + L+Y G
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGN 150
Query: 179 N--IPINLVFAVIAEIVLDLE----------------DKLHPGGPFDPLGLAKDPDQFAL 220
+ + A+ A VL + D L+PGG FDPLGLA+DP+ FA
Sbjct: 151 PSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAE 210
Query: 221 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKE KNGRLAMF+M GFF+QA VTG+GP+ENLA HL DP NN
Sbjct: 211 LKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNN 255
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 137/225 (60%), Gaps = 28/225 (12%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P
Sbjct: 40 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPA 90
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RW MLGA G + PE F + G G EAVWFK G+ + L+Y G
Sbjct: 91 TFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGN 149
Query: 179 N--IPINLVFAVIA-EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFAL 220
+ + A+ A ++VL ++ D L+PGG FDPLGLA DP+ FA
Sbjct: 150 PSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAE 209
Query: 221 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
L+VKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 210 LEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 129/210 (61%), Gaps = 23/210 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 50 WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEI 192
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A
Sbjct: 107 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165
Query: 193 VL-----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
V+ + ED L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+
Sbjct: 166 VILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 225
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 226 MFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 129/210 (61%), Gaps = 23/210 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 50 WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEI 192
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A
Sbjct: 107 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165
Query: 193 VL-----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
V+ + ED L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+
Sbjct: 166 VILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 225
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 226 MFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 129/210 (61%), Gaps = 23/210 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 50 WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEI 192
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A
Sbjct: 107 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165
Query: 193 VL-----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
V+ + ED L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+
Sbjct: 166 VILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFS 225
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 226 MFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 131/220 (59%), Gaps = 23/220 (10%)
Query: 65 VSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQ 124
V P + WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ +
Sbjct: 39 VKPTGPSGSPWYGSDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNR 95
Query: 125 AYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPI 182
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 96 ELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 183 NLVFAVIAEIVL-----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 225
+ A+ A V+ + ED L+PGG FDPLGLA DP+ FA LKVKE
Sbjct: 155 QSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE 214
Query: 226 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 133/209 (63%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 46 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 102
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE ++ G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 103 MLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQ 161
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M
Sbjct: 162 VVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 221
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 222 FGFFVQAIVTGKGPLENLADHIADPVNNN 250
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 137/225 (60%), Gaps = 28/225 (12%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D LS P+
Sbjct: 41 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAELSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGN 150
Query: 179 N--IPINLVFAVIA-EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFAL 220
+ + A+ A ++VL ++ D L+PGG FDPLGLA DP+ FA
Sbjct: 151 PSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAE 210
Query: 221 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 133/209 (63%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 39 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 95
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 96 MLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 154
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL ++ D ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M
Sbjct: 155 VVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 214
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 FGFFVQAIVTGKGPLENLADHLADPVNNN 243
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 191 bits (484), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/222 (47%), Positives = 136/222 (61%), Gaps = 29/222 (13%)
Query: 62 PVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 121
PV+ SP WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+
Sbjct: 42 PVSDSP-------WYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 122 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 179
K + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 92 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSL 150
Query: 180 IPINLVFAVIAEIVL----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKV 223
+ + ++ A V+ ++ D L+PGG FDPLGLA+DP++ A LKV
Sbjct: 151 VHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKV 210
Query: 224 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
KE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 211 KELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 191 bits (484), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 131/210 (62%), Gaps = 24/210 (11%)
Query: 75 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
WYG DR P+ L SE P YLTGE PGDYG+D GLS P+ F++ + E+IH RW
Sbjct: 49 WYGEDR----PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRW 104
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAE 191
AMLGA G + PE +K G G EAVWFK G+ + L+Y G I + AV A
Sbjct: 105 AMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWAS 163
Query: 192 IVLDLE----------------DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
V+ + DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+
Sbjct: 164 QVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFS 223
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 224 MFGFFVQAIVTGKGPIENLFDHVADPVANN 253
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 191 bits (484), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/260 (44%), Positives = 149/260 (57%), Gaps = 35/260 (13%)
Query: 27 SSAVRTSAPGASNPSTFKPVALFSKKKAA--PPAKSKPVAVSPVNEELAKWYGPDRRIFL 84
SA A G S + V F + + KS P ++ WYG DR
Sbjct: 8 QSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSI---------WYGEDR---- 54
Query: 85 PEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
P+ L SE P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G +
Sbjct: 55 PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVF 114
Query: 144 PEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVL------ 194
PE +K G G EAVWFK G+ + L+Y G + + A+ A ++VL
Sbjct: 115 PEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEG 173
Query: 195 ---------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYV 245
+ DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA V
Sbjct: 174 YRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 233
Query: 246 TGEGPVENLAKHLSDPFANN 265
TG+GP+ENL+ H++DP ANN
Sbjct: 234 TGKGPIENLSDHINDPVANN 253
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 191 bits (484), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 132/210 (62%), Gaps = 24/210 (11%)
Query: 75 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
WYG DR P+ L SE P YLTGE PGDYG+D GLS P+ F++ + E+IH RW
Sbjct: 21 WYGEDR----PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRW 76
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAE 191
AMLGA G + PE +K G G EAVWFK G+ + L+Y G I + A+ A
Sbjct: 77 AMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAS 135
Query: 192 IVLDLE----------------DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
V+ + DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+
Sbjct: 136 QVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFS 195
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GP+ENL+ H++DP ANN
Sbjct: 196 MFGFFVQAIVTGKGPIENLSDHIADPVANN 225
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 190 bits (483), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 131/210 (62%), Gaps = 24/210 (11%)
Query: 75 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
WYG DR P+ L SE P YLTGE PGDYG+D GLS P+ F++ + E+IH RW
Sbjct: 49 WYGEDR----PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRW 104
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAE 191
AMLGA G + PE +K G G EAVWFK G+ + L+Y G I + A+ A
Sbjct: 105 AMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAA 163
Query: 192 IVLDLE----------------DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
V+ + DK++PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+
Sbjct: 164 QVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFS 223
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 224 MFGFFVQAIVTGKGPIENLYDHVADPVANN 253
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 190 bits (483), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 129/209 (61%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 48 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWA 104
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L Y G + + A+ A +
Sbjct: 105 MLGALGCVFPELLARNGVKFG-EAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQ 163
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL ++ D L+PGG FDPLGLA D + FA LKVKEIKNGRLAMF+M
Sbjct: 164 VVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSM 223
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 224 FGFFVQAIVTGKGPLENLADHLADPVNNN 252
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 131/210 (62%), Gaps = 24/210 (11%)
Query: 75 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
WYGPDR P+ L SE IP YLTGE PGDYG+D GLS P+ F++ + E+IH+RW
Sbjct: 49 WYGPDR----PKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRW 104
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAE 191
AMLGA G PE K G G EAVWFK G+ + L+Y G I + A+ A
Sbjct: 105 AMLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWAT 163
Query: 192 IVLDLE----------------DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
V+ + D L+PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+
Sbjct: 164 QVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFS 223
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 224 MFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 130/209 (62%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 47 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 103
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEI 192
MLGA G + PE ++ G G EAVWFK G+ + L+Y G I + A+ A
Sbjct: 104 MLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQ 162
Query: 193 VL----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
V+ ++ D ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M
Sbjct: 163 VILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 222
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL+ P NN
Sbjct: 223 FGFFVQAIVTGKGPLENLADHLAGPVNNN 251
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 188 bits (477), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 128/209 (61%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 29 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 85
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIAEI 192
MLGA G + PE + G G EA WFK G+ + L+Y G I + A+ A
Sbjct: 86 MLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQ 144
Query: 193 VL----------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
V+ ++ D ++PGG FDPL LA DP+ FA LKVKEIKNGRLAMF+M
Sbjct: 145 VILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSM 204
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA HL++P NN
Sbjct: 205 FGFFVQAIVTGKGPLENLADHLAEPVNNN 233
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 187 bits (475), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 131/209 (62%), Gaps = 22/209 (10%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 106 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQ 164
Query: 192 IVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 236
+VL ++ D L+PGG FDPLGLA DP+ F LKVKE+K GRLAM +M
Sbjct: 165 VVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSM 224
Query: 237 LGFFLQAYVTGEGPVENLAKHLSDPFANN 265
GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 225 FGFFVQAIVTGKGPLENLADHIADPVNNN 253
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 138/226 (61%), Gaps = 28/226 (12%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
AK+K V+ S + WYG DR ++L G L E P YLTGE PGDYG+D GLS P
Sbjct: 39 AKAKQVSSS------SPWYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 89
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 177
+ F+K + E+IH RWAMLGA G + PE + G G EA WFK G+ + L+Y G
Sbjct: 90 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAGWFKAGSQIFSDGGLDYLG 148
Query: 178 KNIPIN---LVFAVIAEIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFA 219
++ L+ ++VL ++ D L+PGG FDPLGLA+ P FA
Sbjct: 149 NPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFA 208
Query: 220 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
LKVKEIKNGRLAMF+M GFF+QA VTG+GP+E+LA H++DP NN
Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNN 254
>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1
Length = 253
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 128/210 (60%), Gaps = 21/210 (10%)
Query: 74 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
++YGP+R +L G + P YLTGE PGDYG+D GLS P+ F +Y+ ELIHARW
Sbjct: 35 EFYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARW 92
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIA 190
AMLGA G PE K G G EAVWFK GA + L+Y G + N+V
Sbjct: 93 AMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAV 151
Query: 191 EIVL---------------DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 235
+++L + D L+PG FDPLGLA DPD FA LKVKEIKNGRLA F+
Sbjct: 152 QVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFS 211
Query: 236 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 265
M GFF+QA VTG+GPV+NL HL++P NN
Sbjct: 212 MFGFFVQAIVTGKGPVQNLDDHLANPTVNN 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,987,477
Number of Sequences: 539616
Number of extensions: 5687348
Number of successful extensions: 12991
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 12450
Number of HSP's gapped (non-prelim): 229
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)