BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023590
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TCQ1|MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1 OS=Homo sapiens GN=MARCH1 PE=1
SV=1
Length = 289
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 19/169 (11%)
Query: 1 MKGDL----QLEQFSERNPSDADPLLGSQEVSDAPVV-SSPSSSSSSEI--KDEDIENGS 53
+ GDL Q +E++P + + + +P ++P S S + +DI
Sbjct: 24 ISGDLADASQTSTLNEKSPGRSASRSSNISKASSPTTGTAPRSQSRLSVCPSTQDI---- 79
Query: 54 LPCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHL 113
CRIC +G+ + LI+PC C GT +FVH++CL W + C CK F +
Sbjct: 80 ---CRIC-HCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRC---CELCKYDFIM 132
Query: 114 RVELFEDNSWRKIKFRLFVARDVF-FVFLAVQTIIAAMGGFAYLMDKDG 161
+L W K++ R +F V V I + L+D+
Sbjct: 133 ETKLKPLRKWEKLQMTTSERRKIFCSVTFHVIAITCVVWSLYVLIDRTA 181
>sp|Q9DBD2|MARH8_MOUSE E3 ubiquitin-protein ligase MARCH8 OS=Mus musculus GN=March8 PE=2
SV=1
Length = 286
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 14/152 (9%)
Query: 11 SERNPSDADPLLGSQEVSDAPVVSSPSSSSSSEIKDEDIENGSLPCCRICLENDGEPDDE 70
S +PS+ S + APV S S +S ++DI CRIC +G+ +
Sbjct: 39 SMSHPSNISKAGSSPPSTTAPV--SAFSRTSVTPSNQDI-------CRIC-HCEGDDESP 88
Query: 71 LISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRKIKFRL 130
LI+PC C G+ FVH+ACL W + C CK +F + +L W K++
Sbjct: 89 LITPCHCTGSLHFVHQACLQQWIKSSDTRC---CELCKYEFIMETKLKPLRKWEKLQMTA 145
Query: 131 FVARDVF-FVFLAVQTIIAAMGGFAYLMDKDG 161
R + V V I + L+D+
Sbjct: 146 SERRKIMCSVTFHVIAITCVVWSLYVLIDRTA 177
>sp|Q5XH39|MARH8_XENLA E3 ubiquitin-protein ligase MARCH8 OS=Xenopus laevis GN=march8 PE=2
SV=2
Length = 264
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 28 SDAPVVSSPSS-SSSSEIKDEDIENGSLPCCRICLENDGEPDDELISPCMCKGTQQFVHR 86
S+ SP+S S+ S + S CRIC +G+ + LI+PC C G+ FVH+
Sbjct: 23 SNISKAGSPTSVSAPSRFPRTSVTPSSQDICRIC-HCEGDDESPLITPCHCTGSLHFVHQ 81
Query: 87 ACLDHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRKIKFRLFVARDVF-FVFLAVQT 145
ACL W + C CK +F + +L W K++ R + V V
Sbjct: 82 ACLQQWIKSSDTRC---CELCKFEFIMETKLKPLRKWEKLQMTASERRKIMCSVTFHVIA 138
Query: 146 IIAAMGGFAYLMDKDG 161
I + L+D+
Sbjct: 139 ITCVVWSLYVLIDRTA 154
>sp|Q28IK8|MARH8_XENTR E3 ubiquitin-protein ligase MARCH8 OS=Xenopus tropicalis GN=march8
PE=2 SV=1
Length = 264
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 28 SDAPVVSSPSS-SSSSEIKDEDIENGSLPCCRICLENDGEPDDELISPCMCKGTQQFVHR 86
S+ SP+S S+ S + S CRIC +G+ + LI+PC C G+ FVH+
Sbjct: 23 SNISKAGSPTSVSAPSSFPRTSVTPSSQDICRIC-HCEGDDESPLITPCHCTGSLHFVHQ 81
Query: 87 ACLDHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRKIKFRLFVARDVF-FVFLAVQT 145
ACL W + C CK +F + +L W K++ R + V V
Sbjct: 82 ACLQQWIKSSDTRC---CELCKFEFIMETKLKPLRKWEKLQMTASERRKIMCSVTFHVIA 138
Query: 146 IIAAMGGFAYLMDKDG 161
I + L+D+
Sbjct: 139 ITCVVWSLYVLIDRTA 154
>sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1 OS=Mus musculus GN=March1 PE=1
SV=2
Length = 289
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 6 QLEQFSERNPSDADPLLGSQEVSDAPVV-SSPSSSSSSEI--KDEDIENGSLPCCRICLE 62
Q +E++P + + + +P ++P S S + +DI CRIC
Sbjct: 33 QTSTLNEKSPGRSASRSSNISKASSPTTGTAPRSQSRLSVCPSTQDI-------CRIC-H 84
Query: 63 NDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNS 122
+G+ + LI+PC C GT +FVH++CL W + C CK F + +L
Sbjct: 85 CEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRC---CELCKYDFIMETKLKPLRK 141
Query: 123 WRKIKFRLFVARDVF-FVFLAVQTIIAAMGGFAYLMDKDG 161
W K++ R +F V V + + L+D+
Sbjct: 142 WEKLQMTTSERRKIFCSVTFHVIAVTCVVWSLYVLIDRTA 181
>sp|Q5T0T0|MARH8_HUMAN E3 ubiquitin-protein ligase MARCH8 OS=Homo sapiens GN=MARCH8 PE=1
SV=1
Length = 291
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 48 DIENGSLPCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTC 107
I S CRIC +G+ + LI+PC C G+ FVH+ACL W + C C
Sbjct: 71 SITPSSQDICRIC-HCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRC---CELC 126
Query: 108 KAQFHLRVELFEDNSWRKIKFRLFVARDVF-FVFLAVQTIIAAMGGFAYLMDKDG 161
K +F + +L W K++ R + V V I + L+D+
Sbjct: 127 KYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTA 181
>sp|O60103|DOA10_SCHPO ERAD-associated E3 ubiquitin-protein ligase doa10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=doa10 PE=1 SV=1
Length = 1242
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 51 NGSLPCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQ 110
N CR+C +G PD L PC C G+ ++VH+ CL W + +HC CKA+
Sbjct: 2 NADDEICRVC-RCEGAPDSPLFHPCKCTGSIRYVHQECLVEWLGHSKK---THCELCKAK 57
Query: 111 FHLRVELFEDNSWRKIKFRL 130
F +++ ++ R I F +
Sbjct: 58 FEF-TKVYSESMPRTIPFTI 76
>sp|Q0IH10|MARH3_XENLA E3 ubiquitin-protein ligase MARCH3 OS=Xenopus laevis GN=march3 PE=2
SV=1
Length = 252
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQF 111
P CRIC ++G ++L+SPC C GT +HR+CL+HW S S+C C +F
Sbjct: 68 PMCRIC--HEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT---SYCELCHFRF 119
>sp|Q68FA7|MARH3_XENTR E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3
PE=2 SV=1
Length = 251
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQF 111
P CRIC ++G ++L+SPC C GT +HR+CL+HW S S+C C +F
Sbjct: 67 PMCRIC--HEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT---SYCELCHFRF 118
>sp|Q5XIE5|MARH3_RAT E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3
PE=1 SV=1
Length = 253
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQF 111
P CRIC ++G ++L+SPC C GT +HR+CL+HW S S+C C +F
Sbjct: 69 PMCRIC--HEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT---SYCELCHFRF 120
>sp|A0JN69|MARH3_BOVIN E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2
SV=1
Length = 253
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQF 111
P CRIC ++G ++L+SPC C GT +HR+CL+HW S S+C C +F
Sbjct: 69 PMCRIC--HEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT---SYCELCHFRF 120
>sp|Q86UD3|MARH3_HUMAN E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=2
SV=1
Length = 253
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQF 111
P CRIC ++G ++L+SPC C GT +HR+CL+HW S S+C C +F
Sbjct: 69 PMCRIC--HEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT---SYCELCHFRF 120
>sp|Q8BRX9|MARH3_MOUSE E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2
SV=1
Length = 218
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
P CRIC ++G ++L+SPC C GT +HR+CL+HW S S+C C +F +
Sbjct: 69 PMCRIC--HEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT---SYCELCHFRFAVE 123
Query: 115 ------VELFEDNSWRKIKFRLFVARDVFFVFLAVQTI 146
VE + + K LF F + TI
Sbjct: 124 RKPRPLVEWLRNPGPQHEKRTLFGDMVCFLFITPLATI 161
>sp|Q99M02|MARH2_MOUSE E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2
SV=1
Length = 246
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 30 APVVSSPSSSSSSEIKDEDIENGSLPCCRICLENDGEPDDELISPCMCKGTQQFVHRACL 89
A V S S+ I+ D ++ P CRIC ++G + L+SPC C GT VH++CL
Sbjct: 38 AQVTSRDGRLLSTVIRALDSQS-DCPFCRIC--HEGANGENLLSPCGCTGTLGAVHKSCL 94
Query: 90 DHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRK-----IKFRLFVARDVFFVFLAVQ 144
+ W S S+C C +F + W K + R V FVF+
Sbjct: 95 EKWLSSSN---TSYCELCHTEFAVEKRPRPLTEWLKDPGPRTEKRTLCCDMVCFVFI--- 148
Query: 145 TIIAAMGGFAYLMDKDGAFR 164
T +AA+ G+ L R
Sbjct: 149 TPLAAISGWLCLRGAQDHLR 168
>sp|Q5I0I2|MARH2_RAT E3 ubiquitin-protein ligase MARCH2 OS=Rattus norvegicus GN=March2
PE=1 SV=1
Length = 246
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
P CRIC ++G + L+SPC C GT VH++CL+ W S S+C C +F +
Sbjct: 62 PFCRIC--HEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSN---TSYCELCHTEFAVE 116
Query: 115 VELFEDNSWRK-----IKFRLFVARDVFFVFLAVQTIIAAMGGFAYLMDKDGAFR 164
W K + R V FVF+ T +AA+ G+ L R
Sbjct: 117 KRPRPLTEWLKDPGPRTEKRTLCCDMVCFVFI---TPLAAISGWLCLRGAQDHLR 168
>sp|Q32L65|MARH2_BOVIN E3 ubiquitin-protein ligase MARCH2 OS=Bos taurus GN=MARCH2 PE=2
SV=1
Length = 245
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
P CRIC ++G + L+SPC C GT VH++CL+ W S S+C C +F +
Sbjct: 62 PFCRIC--HEGANGESLLSPCGCSGTLGAVHKSCLERWLSSSN---TSYCELCHTEFAVE 116
Query: 115 VELFEDNSWRK-----IKFRLFVARDVFFVFLAVQTIIAAMGGFAYLMDKDGAFR 164
W K + R V F+F+ T +AA+ G+ L R
Sbjct: 117 KRSRSLTEWLKDPGPRTEKRTLCCDVVCFLFI---TPLAAISGWLCLRGAQDHLR 168
>sp|Q0VD59|MARH8_BOVIN E3 ubiquitin-protein ligase MARCH8 OS=Bos taurus GN=MARCH8 PE=2
SV=1
Length = 289
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLRVE 116
CRIC +G+ + LI+PC C G+ FVH+ CL W + C CK +F + +
Sbjct: 78 CRIC-HCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRC---CELCKYEFIMETK 133
Query: 117 LFEDNSWRKIKFRLFVARDVF-FVFLAVQTIIAAMGGFAYLMDKDG 161
L W K++ R + V V I + L+D+
Sbjct: 134 LKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTA 179
>sp|Q5R9W1|MARH6_PONAB E3 ubiquitin-protein ligase MARCH6 OS=Pongo abelii GN=MARCH6 PE=2
SV=1
Length = 910
Score = 48.5 bits (114), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHW--RSVKEGFAFSHCTTCKAQF 111
CR+C ++G P+ L PC+C G+ +F+H+ CL W S KE +C CK +F
Sbjct: 9 CRVC-RSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKE-----YCELCKHRF 59
>sp|O60337|MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 OS=Homo sapiens GN=MARCH6 PE=1
SV=2
Length = 910
Score = 48.1 bits (113), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHW--RSVKEGFAFSHCTTCKAQF 111
CR+C ++G P+ L PC+C G+ +F+H+ CL W S KE +C CK +F
Sbjct: 9 CRVC-RSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKE-----YCELCKHRF 59
>sp|Q6ZQ89|MARH6_MOUSE E3 ubiquitin-protein ligase MARCH6 OS=Mus musculus GN=March6 PE=2
SV=2
Length = 909
Score = 48.1 bits (113), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHW--RSVKEGFAFSHCTTCKAQF 111
CR+C ++G P+ L PC+C G+ +F+H+ CL W S KE +C CK +F
Sbjct: 9 CRVC-RSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKE-----YCELCKHRF 59
>sp|Q28EX7|MARH2_XENTR E3 ubiquitin-protein ligase MARCH2 OS=Xenopus tropicalis GN=march2
PE=2 SV=1
Length = 246
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
P CRIC ++G + L+SPC C GT VH+ CL+ W S S+C C +F +
Sbjct: 62 PICRIC--HEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNT---SYCELCHTEFAVE 116
Query: 115 ------VELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAMGGFAYL 156
E +D R K LF V F+F+ T +AA+ G+ L
Sbjct: 117 RRPRPVTEWLKDPGPRNEKRTLFCDM-VCFLFI---TPLAAISGWLCL 160
>sp|Q5XIV2|MARHA_RAT Probable E3 ubiquitin-protein ligase MARCH10 OS=Rattus norvegicus
GN=March10 PE=2 SV=1
Length = 790
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVK--EGFAFSHCTTCK 108
CRIC G P + L+ PC C G+ QFVH+ CL W VK G S TC+
Sbjct: 641 CRICQIAGGSPANPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLSTVKTCE 694
>sp|Q5PQ35|MARH2_XENLA E3 ubiquitin-protein ligase MARCH2 OS=Xenopus laevis GN=march2 PE=2
SV=1
Length = 246
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
P CRIC ++G + L+SPC C GT VH+ CL+ W S S+C C +F +
Sbjct: 62 PICRIC--HEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNT---SYCELCHTEFAVE 116
Query: 115 ------VELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAMGGF 153
E +D R K LF V F+F+ T +AA+ G+
Sbjct: 117 RRPRPVTEWLKDPGPRHEKRTLFCDM-VCFLFI---TPLAAISGW 157
>sp|Q9P0N8|MARH2_HUMAN E3 ubiquitin-protein ligase MARCH2 OS=Homo sapiens GN=MARCH2 PE=1
SV=1
Length = 246
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 30 APVVSSPSSSSSSEIKDEDIENGSLPCCRICLENDGEPDDELISPCMCKGTQQFVHRACL 89
A V S S+ I+ D + P CRIC ++G + L+SPC C GT VH++CL
Sbjct: 38 AQVTSRDGRLLSTVIRALDTPSDG-PFCRIC--HEGANGECLLSPCGCTGTLGAVHKSCL 94
Query: 90 DHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRK-----IKFRLFVARDVFFVFLAVQ 144
+ W S S+C C +F + W K + R V F+F+
Sbjct: 95 EKWLSSSN---TSYCELCHTEFAVEKRPRPLTEWLKDPGPRTEKRTLCCDMVCFLFI--- 148
Query: 145 TIIAAMGGFAYLMDKDGAFR 164
T +AA+ G+ L R
Sbjct: 149 TPLAAISGWLCLRGAQDHLR 168
>sp|Q1LVZ2|MARH2_DANRE E3 ubiquitin-protein ligase MARCH2 OS=Danio rerio GN=march2 PE=2
SV=1
Length = 249
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 55 PCCRICLENDGEPDDE-LISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHL 113
P CRIC E + E L+SPC C GT VH++CL+ W S S+C C +F +
Sbjct: 62 PICRICHEGQDVCNSEGLLSPCDCTGTLGTVHKSCLEKWLSSSNT---SYCELCHTEFTI 118
Query: 114 R------VELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAMGGF 153
E D R K LF V F+F+ T +AA+ G+
Sbjct: 119 ERRPRPLTEWLRDPGPRNEKRTLFCDM-VCFLFI---TPLAAISGW 160
>sp|Q8NA82|MARHA_HUMAN Probable E3 ubiquitin-protein ligase MARCH10 OS=Homo sapiens
GN=MARCH10 PE=2 SV=3
Length = 808
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVK--EGFAFSHCTTCK 108
CRIC G P + L+ PC C G+ QFVH+ CL W VK G TC+
Sbjct: 659 CRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCE 712
>sp|A6NNE9|MARHB_HUMAN E3 ubiquitin-protein ligase MARCH11 OS=Homo sapiens GN=MARCH11 PE=2
SV=3
Length = 402
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFH-L 113
P C+IC + G EL++PC C G+ ++ H+ CL W S + + C C ++H +
Sbjct: 168 PICKICFQ--GAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWT---CELCCYRYHVI 222
Query: 114 RVELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAM 150
+++ + W+ I L + V L +IA++
Sbjct: 223 AIKMKQPCQWQSISITLVEKVQMIAVILGSLFLIASV 259
>sp|Q5XI50|MARH7_RAT E3 ubiquitin-protein ligase MARCH7 OS=Rattus norvegicus GN=March7
PE=2 SV=1
Length = 692
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVK--EGFAFSHCTT---CKAQF 111
CRIC + LI PC C G+ Q+VH+ C+ W K G + TT CK +
Sbjct: 553 CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKEKL 612
Query: 112 HLRVELFE 119
L +E F+
Sbjct: 613 QLNLEDFD 620
>sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattus norvegicus GN=March11
PE=1 SV=1
Length = 398
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
P C+IC + G EL++PC C G+ ++ H+ CL W S + + C C ++H+
Sbjct: 164 PICKICFQ--GAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWT---CELCCYRYHVT 218
Query: 115 -VELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAM 150
+++ + W+ I L + V L +IA++
Sbjct: 219 AIKMKQPCQWQSISITLVEKVQMIAVILGSLFLIASV 255
>sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus musculus GN=March11 PE=2
SV=2
Length = 400
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
P C+IC + G EL++PC C G+ ++ H+ CL W S + + C C ++H+
Sbjct: 166 PICKICFQ--GAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWT---CELCCYRYHVT 220
Query: 115 -VELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAM 150
+++ + W+ I L + V L +IA++
Sbjct: 221 AIKMKQPCQWQSISITLVEKVQMIAVILGSLFLIASV 257
>sp|Q9WV66|MARH7_MOUSE E3 ubiquitin-protein ligase MARCH7 OS=Mus musculus GN=March7 PE=2
SV=1
Length = 693
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGF-----AFSHCTTCKAQF 111
CRIC + LI PC C G+ Q+VH+ C+ W K A + C CK +
Sbjct: 554 CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKEKL 613
Query: 112 HLRVELFE 119
L +E F+
Sbjct: 614 QLNLEDFD 621
>sp|Q5R9W2|MARH7_PONAB E3 ubiquitin-protein ligase MARCH7 OS=Pongo abelii GN=MARCH7 PE=2
SV=1
Length = 707
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGF-----AFSHCTTCKAQF 111
CRIC + LI PC C G+ Q+VH+ C+ W K A + C CK +
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKL 611
Query: 112 HLRVELFE 119
L +E F+
Sbjct: 612 ELNLEDFD 619
>sp|Q9H992|MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 OS=Homo sapiens GN=MARCH7 PE=1
SV=1
Length = 704
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 57 CRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVK--EGFAFSHCTT---CKAQF 111
CRIC + LI PC C G+ Q+VH+ C+ W K G + TT CK +
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKL 611
Query: 112 HLRVELFE 119
L +E F+
Sbjct: 612 ELNLEDFD 619
>sp|P40318|DOA10_YEAST ERAD-associated E3 ubiquitin-protein ligase DOA10 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SSM4 PE=1
SV=1
Length = 1319
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 31/155 (20%)
Query: 46 DEDIENGSLPCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVK-----EGFA 100
++D +G+ CRIC + D+ L PC C+G+ +++H +CL W + K + A
Sbjct: 30 NDDAPSGA--TCRIC-RGEATEDNPLFHPCKCRGSIKYMHESCLLEWVASKNIDISKPGA 86
Query: 101 FSHCTTCKAQFHLRVELFEDNSWRKIKFRLFVARDVFFVF----LAVQTIIAA------- 149
C C + ++ +N KI F L +++ + F LA+ +AA
Sbjct: 87 DVKCDICHYPIQFKT-IYAENMPEKIPFSLLLSKSILTFFEKARLALTIGLAAVLYIIGV 145
Query: 150 -----MGGFAYLMDKDGA------FRNSFSDGWDR 173
M G Y M DG+ F S G+D+
Sbjct: 146 PLVWNMFGKLYTMMLDGSSPYPGDFLKSLIYGYDQ 180
>sp|Q9P2E8|MARH4_HUMAN E3 ubiquitin-protein ligase MARCH4 OS=Homo sapiens GN=MARCH4 PE=2
SV=2
Length = 410
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFH-L 113
P CRIC + G EL+SPC C G+ + H+ CL W S + ++ C C ++H +
Sbjct: 161 PLCRICFQ--GPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWS---CELCYYKYHVI 215
Query: 114 RVELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAM 150
+ W+ I + V L +IA++
Sbjct: 216 AISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASI 252
>sp|P90489|MIR2_HHV8P E3 ubiquitin-protein ligase MIR2 OS=Human herpesvirus 8 type P
(isolate GK18) GN=K5 PE=1 SV=1
Length = 256
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 44 IKDEDIENG-SLPCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFS 102
+ +D+E G P C IC E G +E I PC C G VH CL W +V A
Sbjct: 1 MASKDVEEGVEGPICWICREEVG---NEGIHPCACTGELDVVHPQCLSTWLTVSRNTACQ 57
Query: 103 HCTT---CKAQFHLRVELFEDNSWRKIKFRLFV 132
C + Q+ R+ L+ + ++I F LF+
Sbjct: 58 MCRVIYRTRTQWRSRLNLWPEMERQEI-FELFL 89
>sp|Q80TE3|MARH4_MOUSE E3 ubiquitin-protein ligase MARCH4 OS=Mus musculus GN=March4 PE=2
SV=3
Length = 409
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFH-L 113
P CRIC + G EL+SPC C G+ + H+ CL W S + ++ C C ++H +
Sbjct: 160 PLCRICFQ--GPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWS---CELCYYKYHVI 214
Query: 114 RVELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAM 150
+ W+ I + + L +IA++
Sbjct: 215 AISTKNPLQWQAISLTVIEKVQIAAAILGSLFLIASI 251
>sp|Q997C2|LAP_MYXVL E3 ubiquitin-protein ligase LAP OS=Myxoma virus (strain Lausanne)
GN=LAP PE=3 SV=1
Length = 206
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
CC IC E D + + C C+G + VH+ CL+ W + + C C++ ++L+
Sbjct: 21 KCCWIC----KEACDIVPNYCKCRGDNKIVHKECLEEWINT-DVVKNKSCAICESPYNLK 75
Query: 115 VELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAMGGF 153
+ WR K D V +++ I+ MGG+
Sbjct: 76 RRYKKITKWRCYKRD---CHDSLLVNMSLCLIVGGMGGY 111
>sp|P90495|MIR1_HHV8P E3 ubiquitin-protein ligase MIR1 OS=Human herpesvirus 8 type P
(isolate GK18) GN=K3 PE=1 SV=1
Length = 333
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 17/91 (18%)
Query: 44 IKDEDIENGSLPCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSH 103
++DED+ P C IC E G +E C C G + VHR+CL W ++ A
Sbjct: 1 MEDEDV-----PVCWICNEELG---NERFRACGCTGELENVHRSCLSTWLTISRNTA--- 49
Query: 104 CTTCKAQFHLRVELFEDNSWRKIKFRLFVAR 134
C C ++ RV WR ++ + R
Sbjct: 50 CQICGVVYNTRV------VWRPLREMTLLPR 74
>sp|Q86YJ5|MARH9_HUMAN E3 ubiquitin-protein ligase MARCH9 OS=Homo sapiens GN=MARCH9 PE=1
SV=2
Length = 346
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFH-L 113
P CRIC + G EL+SPC C G+ + H+ CL W S + ++ C C ++ L
Sbjct: 108 PQCRICFQ--GPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWS---CELCYFKYQVL 162
Query: 114 RVELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAM 150
+ W+ I + + + L ++A++
Sbjct: 163 AISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASI 199
>sp|Q0P496|MARH4_DANRE E3 ubiquitin-protein ligase MARCH4 OS=Danio rerio GN=march4 PE=2
SV=1
Length = 421
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
P CRIC + G EL+SPC C G+ + H CL W S + ++ C C ++ +
Sbjct: 141 PLCRICFQ--GPEQGELLSPCRCSGSVRCTHEPCLIKWISERGSWS---CELCYYKYQV- 194
Query: 115 VELFEDN--SWRKIKFRLFVARDVFFVFLAVQTIIAAMGGFAY 155
+ + N W+ I + + L +IA++ +
Sbjct: 195 IAISTKNPLQWQAISLTVIEKVQIAAAVLGSLFLIASISWLVW 237
>sp|Q3TZ87|MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9 OS=Mus musculus GN=March9 PE=2
SV=1
Length = 348
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFH-L 113
P CRIC + G EL+SPC C G+ + H+ CL W S + ++ C C ++ L
Sbjct: 108 PQCRICFQ--GPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWS---CELCYFKYQVL 162
Query: 114 RVELFEDNSWRKIKFRLFVARDVFFVFLAVQTIIAAM 150
+ W+ I + + + L ++A++
Sbjct: 163 AISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASI 199
>sp|Q3KNM2|MARH5_MOUSE E3 ubiquitin-protein ligase MARCH5 OS=Mus musculus GN=March5 PE=2
SV=1
Length = 278
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 57 CRICLEND-GEPDDELISPCMCKGTQQFVHRACLDHWRSVKE---GFAFSHCTTCKAQF 111
C +C D + E + PC C+G+ ++VH+ACL W K+ A C C A++
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>sp|Q9NX47|MARH5_HUMAN E3 ubiquitin-protein ligase MARCH5 OS=Homo sapiens GN=MARCH5 PE=1
SV=1
Length = 278
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 57 CRICLEND-GEPDDELISPCMCKGTQQFVHRACLDHWRSVKE---GFAFSHCTTCKAQF 111
C +C D + E + PC C+G+ ++VH+ACL W K+ A C C A++
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>sp|Q0X0A5|MARH5_CHLAE E3 ubiquitin-protein ligase MARCH5 OS=Chlorocebus aethiops
GN=MARCH5 PE=2 SV=1
Length = 278
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 57 CRICLEND-GEPDDELISPCMCKGTQQFVHRACLDHWRSVKE---GFAFSHCTTCKAQF 111
C +C D + E + PC C+G+ ++VH+ACL W K+ A C C A++
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>sp|Q3ZC24|MARH5_BOVIN E3 ubiquitin-protein ligase MARCH5 OS=Bos taurus GN=MARCH5 PE=2
SV=1
Length = 278
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 57 CRICLEND-GEPDDELISPCMCKGTQQFVHRACLDHWRSVKE---GFAFSHCTTCKAQF 111
C +C D + E + PC C+G+ ++VH+ACL W K+ A C C A++
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>sp|Q6GM44|MARH5_XENLA E3 ubiquitin-protein ligase MARCH5 OS=Xenopus laevis GN=march5 PE=2
SV=1
Length = 283
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 57 CRICLEND-GEPDDELISPCMCKGTQQFVHRACLDHWRSVKE---GFAFSHCTTCKAQF 111
C +C D + E + PC C+G+ ++VH+ACL W K+ A C C A++
Sbjct: 17 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 75
>sp|Q5ZJ41|MARH5_CHICK E3 ubiquitin-protein ligase MARCH5 OS=Gallus gallus GN=MARCH5 PE=2
SV=1
Length = 281
Score = 38.5 bits (88), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 57 CRICLEND-GEPDDELISPCMCKGTQQFVHRACLDHWRSVKE---GFAFSHCTTCKAQF 111
C +C D + E + PC C+G+ ++VH+ CL W K+ A C C A++
Sbjct: 17 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQTCLQRWVDEKQRGNSTARVACPQCNAEY 75
>sp|Q6NYK8|MARH5_DANRE E3 ubiquitin-protein ligase MARCH5 OS=Danio rerio GN=march5 PE=2
SV=1
Length = 289
Score = 38.1 bits (87), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 57 CRICLENDGEPDD-ELISPCMCKGTQQFVHRACLDHWRSVKE----GFAFSHCTTCKAQF 111
C +C + E E +SPC CKG +++H++CL W K+ G A S C C ++
Sbjct: 12 CWVCFATEKEDRAAEWVSPCRCKGCTKWIHQSCLQRWLDEKQKGNSGGAVS-CPQCGTEY 70
Query: 112 HL 113
+
Sbjct: 71 RI 72
>sp|Q9Q8T2|LAP_RFVKA E3 ubiquitin-protein ligase LAP OS=Rabbit fibroma virus (strain
Kasza) GN=s153R PE=3 SV=1
Length = 201
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 55 PCCRICLENDGEPDDELISPCMCKGTQQFVHRACLDHWRSVKEGFAFSHCTTCKAQFHLR 114
CC IC E D + + C C+G + VH+ CL+ W + + C C+ ++++
Sbjct: 15 KCCWIC----KESCDVVRNYCKCRGDNKIVHKECLEEWINT-DTVKNKSCAICETPYNVK 69
Query: 115 VELFEDNSWR 124
+ + WR
Sbjct: 70 QQYKKLTKWR 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.477
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,552,842
Number of Sequences: 539616
Number of extensions: 4579338
Number of successful extensions: 13841
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 13768
Number of HSP's gapped (non-prelim): 83
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)