Query 023593
Match_columns 280
No_of_seqs 122 out of 1196
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 05:12:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023593.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023593hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1444 Nucleotide-sugar trans 100.0 2.2E-37 4.9E-42 261.5 21.2 271 1-278 27-298 (314)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 1.3E-35 2.7E-40 260.7 23.9 268 2-278 18-291 (302)
3 PTZ00343 triose or hexose phos 100.0 6.7E-35 1.5E-39 260.3 27.4 273 2-278 65-346 (350)
4 KOG1441 Glucose-6-phosphate/ph 100.0 9.4E-33 2E-37 238.4 11.4 271 2-278 33-305 (316)
5 PF08449 UAA: UAA transporter 100.0 2.8E-28 6E-33 214.1 24.8 254 15-278 30-295 (303)
6 COG5070 VRG4 Nucleotide-sugar 100.0 7.7E-29 1.7E-33 198.4 12.6 265 1-277 21-293 (309)
7 PLN00411 nodulin MtN21 family 100.0 1.5E-26 3.3E-31 206.1 25.8 262 3-277 30-325 (358)
8 PRK11272 putative DMT superfam 100.0 5.4E-26 1.2E-30 198.6 28.1 253 4-277 26-282 (292)
9 TIGR00950 2A78 Carboxylate/Ami 100.0 9.3E-26 2E-30 193.8 26.9 251 3-275 6-259 (260)
10 KOG1442 GDP-fucose transporter 99.9 8.4E-29 1.8E-33 203.8 5.2 271 1-278 43-325 (347)
11 PRK11453 O-acetylserine/cystei 99.9 8.4E-25 1.8E-29 191.7 28.7 257 4-277 22-284 (299)
12 PRK11689 aromatic amino acid e 99.9 5.3E-25 1.1E-29 192.6 25.2 246 4-276 22-283 (295)
13 PRK10532 threonine and homoser 99.9 6.6E-24 1.4E-28 185.5 27.3 244 4-276 30-277 (293)
14 PRK15430 putative chlorampheni 99.9 5.4E-23 1.2E-27 180.0 27.5 249 5-275 27-280 (296)
15 KOG1443 Predicted integral mem 99.9 7.2E-24 1.6E-28 177.5 15.4 270 3-278 33-313 (349)
16 TIGR03340 phn_DUF6 phosphonate 99.9 1.7E-21 3.6E-26 169.4 20.7 245 21-277 31-280 (281)
17 KOG1580 UDP-galactose transpor 99.9 7E-22 1.5E-26 159.8 14.1 252 13-274 49-307 (337)
18 PF06027 DUF914: Eukaryotic pr 99.9 7.3E-20 1.6E-24 160.3 24.2 253 13-278 39-303 (334)
19 TIGR00688 rarD rarD protein. T 99.9 1.6E-19 3.6E-24 154.8 25.7 228 4-255 20-255 (256)
20 KOG1581 UDP-galactose transpor 99.9 2.4E-20 5.2E-25 156.5 19.2 256 11-276 45-309 (327)
21 KOG1582 UDP-galactose transpor 99.9 1.1E-20 2.4E-25 155.9 14.1 262 6-277 63-329 (367)
22 COG0697 RhaT Permeases of the 99.8 4.2E-18 9.1E-23 147.9 28.0 242 17-276 36-283 (292)
23 COG5006 rhtA Threonine/homoser 99.8 1.8E-17 3.9E-22 135.8 21.9 234 17-275 40-277 (292)
24 PF04142 Nuc_sug_transp: Nucle 99.8 2.9E-17 6.4E-22 139.1 20.6 211 48-270 14-243 (244)
25 TIGR00776 RhaT RhaT L-rhamnose 99.8 9.8E-17 2.1E-21 139.9 23.3 236 13-277 25-285 (290)
26 KOG1583 UDP-N-acetylglucosamin 99.8 1.4E-18 3E-23 143.9 6.7 250 16-279 32-313 (330)
27 PF03151 TPT: Triose-phosphate 99.7 4.5E-17 9.7E-22 128.7 14.3 145 132-278 1-151 (153)
28 KOG2234 Predicted UDP-galactos 99.7 1.4E-14 3.1E-19 125.1 24.3 217 50-278 91-320 (345)
29 KOG2765 Predicted membrane pro 99.6 8.5E-15 1.8E-19 126.5 14.5 212 53-274 161-384 (416)
30 COG2962 RarD Predicted permeas 99.6 7.5E-13 1.6E-17 111.5 24.8 244 13-276 31-279 (293)
31 KOG4510 Permease of the drug/m 99.6 5.9E-16 1.3E-20 127.8 2.0 206 55-275 101-320 (346)
32 TIGR00803 nst UDP-galactose tr 99.4 3.7E-12 8.1E-17 106.9 13.5 188 75-278 2-222 (222)
33 KOG3912 Predicted integral mem 99.4 1.1E-11 2.4E-16 103.5 15.4 221 52-280 87-334 (372)
34 PF00892 EamA: EamA-like trans 99.3 1.9E-11 4E-16 92.7 11.5 116 3-122 8-125 (126)
35 PF13536 EmrE: Multidrug resis 99.2 1E-10 2.3E-15 87.6 10.3 105 22-127 2-110 (113)
36 COG2510 Predicted membrane pro 99.1 7.9E-10 1.7E-14 81.9 10.8 133 132-277 4-136 (140)
37 PF06800 Sugar_transport: Suga 99.1 2.6E-08 5.7E-13 84.6 21.3 209 49-277 43-268 (269)
38 KOG4314 Predicted carbohydrate 99.1 7E-11 1.5E-15 93.9 4.1 211 51-275 53-271 (290)
39 PF00892 EamA: EamA-like trans 99.1 5.6E-10 1.2E-14 84.5 8.5 122 141-277 1-123 (126)
40 COG2510 Predicted membrane pro 99.0 1.2E-09 2.5E-14 81.0 7.7 116 4-122 21-138 (140)
41 PRK15430 putative chlorampheni 98.8 1.7E-07 3.7E-12 82.2 14.9 136 128-276 5-141 (296)
42 TIGR00688 rarD rarD protein. T 98.8 1.7E-07 3.7E-12 80.4 14.4 136 131-276 2-138 (256)
43 TIGR03340 phn_DUF6 phosphonate 98.7 2.7E-07 5.7E-12 80.3 13.0 129 133-276 3-131 (281)
44 TIGR00950 2A78 Carboxylate/Ami 98.7 3.9E-07 8.5E-12 78.0 12.7 113 4-118 146-259 (260)
45 KOG2766 Predicted membrane pro 98.7 4E-09 8.7E-14 87.2 0.0 245 13-278 44-297 (336)
46 PRK15051 4-amino-4-deoxy-L-ara 98.6 2.8E-06 6.1E-11 63.1 13.2 63 60-122 46-108 (111)
47 PLN00411 nodulin MtN21 family 98.5 6E-06 1.3E-10 74.1 14.6 134 131-276 13-152 (358)
48 PRK11272 putative DMT superfam 98.3 1.9E-05 4.1E-10 69.1 13.7 109 17-125 177-287 (292)
49 COG2962 RarD Predicted permeas 98.3 2E-05 4.2E-10 67.1 12.4 135 129-276 5-140 (293)
50 PRK10532 threonine and homoser 98.2 2.4E-05 5.3E-10 68.4 12.8 77 47-123 204-281 (293)
51 PF05653 Mg_trans_NIPA: Magnes 98.2 1.2E-05 2.5E-10 70.5 10.1 70 53-122 51-121 (300)
52 PTZ00343 triose or hexose phos 98.2 6.7E-05 1.4E-09 67.4 15.0 136 129-277 47-183 (350)
53 PRK11689 aromatic amino acid e 98.2 2.2E-05 4.7E-10 68.8 11.5 77 46-122 210-286 (295)
54 PF13536 EmrE: Multidrug resis 98.2 2.2E-05 4.8E-10 58.6 9.9 95 178-276 7-102 (113)
55 TIGR00817 tpt Tpt phosphate/ph 98.1 0.00012 2.5E-09 64.3 14.6 126 138-277 9-134 (302)
56 PF03151 TPT: Triose-phosphate 98.1 6.8E-05 1.5E-09 58.8 11.4 117 5-122 19-152 (153)
57 PRK13499 rhamnose-proton sympo 98.0 0.0023 5E-08 56.9 21.3 229 46-276 68-337 (345)
58 PRK11453 O-acetylserine/cystei 98.0 0.00013 2.9E-09 63.9 12.6 79 46-124 209-288 (299)
59 PRK02971 4-amino-4-deoxy-L-ara 98.0 0.00021 4.6E-09 54.5 12.0 114 131-276 2-118 (129)
60 PRK02971 4-amino-4-deoxy-L-ara 98.0 7.6E-05 1.6E-09 57.0 9.3 71 55-125 51-124 (129)
61 COG4975 GlcU Putative glucose 97.8 8.4E-06 1.8E-10 67.5 2.0 213 44-276 52-281 (288)
62 PRK10452 multidrug efflux syst 97.8 0.00024 5.1E-09 53.3 8.9 72 53-124 32-104 (120)
63 COG2076 EmrE Membrane transpor 97.6 0.0005 1.1E-08 50.0 8.7 73 51-123 30-103 (106)
64 PRK09541 emrE multidrug efflux 97.6 0.00061 1.3E-08 50.4 9.2 72 53-124 32-104 (110)
65 PRK15051 4-amino-4-deoxy-L-ara 97.6 0.00028 6.1E-09 52.4 7.1 60 217-276 45-105 (111)
66 PRK10650 multidrug efflux syst 97.6 0.00072 1.6E-08 49.8 9.0 71 51-121 35-106 (109)
67 PRK11431 multidrug efflux syst 97.6 0.0008 1.7E-08 49.3 9.0 72 51-122 29-101 (105)
68 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.00067 1.5E-08 59.3 10.1 75 48-122 208-287 (290)
69 COG0697 RhaT Permeases of the 97.6 0.0024 5.2E-08 55.0 13.6 79 46-124 209-288 (292)
70 PF06027 DUF914: Eukaryotic pr 97.5 0.0028 6.1E-08 56.2 12.8 65 212-276 83-147 (334)
71 PF08449 UAA: UAA transporter 97.1 0.011 2.5E-07 51.9 12.8 122 143-277 12-133 (303)
72 PF04657 DUF606: Protein of un 97.1 0.026 5.7E-07 43.5 13.2 130 133-276 3-137 (138)
73 PF00893 Multi_Drug_Res: Small 97.1 0.0025 5.3E-08 45.7 6.6 62 53-114 31-93 (93)
74 COG5006 rhtA Threonine/homoser 97.1 0.0071 1.5E-07 50.7 9.9 67 54-120 212-279 (292)
75 PRK09541 emrE multidrug efflux 96.8 0.0043 9.4E-08 45.9 6.3 60 217-276 38-99 (110)
76 KOG2922 Uncharacterized conser 96.8 0.011 2.4E-07 51.2 9.4 65 60-124 73-137 (335)
77 PF05653 Mg_trans_NIPA: Magnes 96.6 0.013 2.7E-07 51.5 8.9 114 130-277 6-119 (300)
78 COG2076 EmrE Membrane transpor 96.6 0.008 1.7E-07 43.8 6.2 58 219-276 40-99 (106)
79 PRK10452 multidrug efflux syst 96.5 0.0095 2E-07 44.7 6.3 60 217-276 38-99 (120)
80 PRK10650 multidrug efflux syst 96.5 0.011 2.5E-07 43.5 6.4 58 219-276 45-104 (109)
81 PRK11431 multidrug efflux syst 96.5 0.012 2.5E-07 43.2 6.4 50 227-276 48-98 (105)
82 PF10639 UPF0546: Uncharacteri 96.4 0.009 2E-07 44.2 5.6 60 61-120 51-111 (113)
83 PF04142 Nuc_sug_transp: Nucle 96.4 0.013 2.8E-07 49.9 7.2 68 210-277 19-86 (244)
84 PF06800 Sugar_transport: Suga 95.9 0.092 2E-06 45.1 9.8 69 49-118 194-266 (269)
85 PF00893 Multi_Drug_Res: Small 95.8 0.03 6.5E-07 40.1 5.8 54 218-271 38-93 (93)
86 KOG4510 Permease of the drug/m 95.6 0.0079 1.7E-07 50.9 2.3 66 212-277 101-166 (346)
87 PRK13499 rhamnose-proton sympo 95.4 0.18 3.9E-06 45.0 10.2 131 130-276 6-149 (345)
88 PF04657 DUF606: Protein of un 95.2 0.36 7.9E-06 37.2 10.3 103 17-120 30-138 (138)
89 KOG2234 Predicted UDP-galactos 94.7 0.79 1.7E-05 40.6 12.2 113 163-275 42-159 (345)
90 KOG1441 Glucose-6-phosphate/ph 94.2 0.065 1.4E-06 47.2 4.2 111 11-123 190-307 (316)
91 TIGR00803 nst UDP-galactose tr 93.7 0.09 2E-06 43.9 4.2 63 58-120 159-221 (222)
92 KOG2765 Predicted membrane pro 92.7 0.21 4.5E-06 44.5 4.9 68 210-277 161-228 (416)
93 COG3238 Uncharacterized protei 92.7 3.9 8.5E-05 31.9 11.5 133 131-276 5-142 (150)
94 KOG4314 Predicted carbohydrate 90.8 0.37 8E-06 39.2 4.0 57 221-277 66-122 (290)
95 KOG1581 UDP-galactose transpor 90.6 1.9 4.2E-05 37.5 8.4 73 48-120 238-310 (327)
96 KOG1580 UDP-galactose transpor 89.8 0.8 1.7E-05 38.3 5.3 71 50-120 240-310 (337)
97 COG5070 VRG4 Nucleotide-sugar 89.4 3.4 7.3E-05 34.5 8.5 70 48-117 221-290 (309)
98 PF06379 RhaT: L-rhamnose-prot 89.3 6.3 0.00014 35.0 10.7 131 130-275 6-148 (344)
99 COG4975 GlcU Putative glucose 88.4 0.52 1.1E-05 39.7 3.4 71 49-120 208-282 (288)
100 PF10639 UPF0546: Uncharacteri 87.0 2.6 5.7E-05 31.2 6.0 49 228-276 61-110 (113)
101 PF06379 RhaT: L-rhamnose-prot 84.7 22 0.00048 31.7 11.5 131 22-152 39-194 (344)
102 KOG2766 Predicted membrane pro 83.0 0.71 1.5E-05 39.1 1.6 67 211-277 81-147 (336)
103 KOG2922 Uncharacterized conser 82.9 0.93 2E-05 39.7 2.4 114 129-276 19-132 (335)
104 KOG1444 Nucleotide-sugar trans 78.5 7.4 0.00016 34.1 6.4 71 53-123 230-300 (314)
105 KOG1442 GDP-fucose transporter 76.0 2.1 4.5E-05 36.8 2.3 56 225-280 119-174 (347)
106 COG3238 Uncharacterized protei 75.6 37 0.00079 26.6 9.9 104 16-121 33-144 (150)
107 KOG4831 Unnamed protein [Funct 71.0 7.6 0.00016 28.2 3.8 57 64-120 65-122 (125)
108 PRK02237 hypothetical protein; 70.3 11 0.00023 27.6 4.5 38 86-123 68-105 (109)
109 PF02694 UPF0060: Uncharacteri 68.2 10 0.00023 27.6 4.1 39 85-123 65-103 (107)
110 PF07857 DUF1632: CEO family ( 64.2 13 0.00029 31.7 4.7 124 132-277 1-131 (254)
111 KOG3912 Predicted integral mem 62.8 16 0.00035 31.7 4.8 50 226-275 104-153 (372)
112 TIGR02865 spore_II_E stage II 52.3 2.6E+02 0.0057 28.1 13.8 42 80-121 13-54 (764)
113 PF04342 DUF486: Protein of un 51.2 22 0.00048 25.8 3.3 59 62-120 46-105 (108)
114 TIGR03644 marine_trans_1 proba 50.6 2.1E+02 0.0045 26.4 18.3 63 87-152 253-316 (404)
115 COG1742 Uncharacterized conser 44.8 27 0.00058 25.4 2.8 38 86-123 67-104 (109)
116 PRK10666 ammonium transporter; 44.7 2.6E+02 0.0057 26.0 18.7 27 212-238 382-408 (428)
117 COG1575 MenA 1,4-dihydroxy-2-n 43.9 1.2E+02 0.0027 26.6 7.4 48 108-155 21-68 (303)
118 KOG1582 UDP-galactose transpor 40.9 2.3E+02 0.0049 24.8 8.2 51 75-125 284-334 (367)
119 COG3169 Uncharacterized protei 37.1 1E+02 0.0022 22.2 4.7 52 70-121 61-113 (116)
120 PRK02237 hypothetical protein; 35.8 39 0.00085 24.7 2.6 37 239-275 64-100 (109)
121 PF02694 UPF0060: Uncharacteri 33.7 40 0.00086 24.6 2.3 36 240-275 63-98 (107)
122 PLN02776 prenyltransferase 33.1 3.6E+02 0.0079 24.2 16.2 37 226-263 116-152 (341)
123 KOG1443 Predicted integral mem 29.3 2.9E+02 0.0063 24.5 7.2 63 59-121 251-313 (349)
124 PF04018 DUF368: Domain of unk 26.1 4.2E+02 0.0091 22.7 10.9 97 50-148 53-157 (257)
125 COG3274 Predicted O-acyltransf 20.9 6.1E+02 0.013 22.7 9.0 78 44-121 3-89 (332)
No 1
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-37 Score=261.55 Aligned_cols=271 Identities=41% Similarity=0.668 Sum_probs=247.7
Q ss_pred CeeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593 1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV 80 (280)
Q Consensus 1 ~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 80 (280)
|+++||+++++|+||...++...|..++.+.+...++.|..+.|+++|++.|+++|.+++|.++.+++..+++|+|+|++
T Consensus 27 m~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~ 106 (314)
T KOG1444|consen 27 MTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMF 106 (314)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHH
Confidence 57899999999998877777789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593 81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV 160 (280)
Q Consensus 81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 160 (280)
+++|+.+|+++++.+..++|+|++++.|.++....+|......+|.+++..|+.|+..++++.+.+.++.||..+
T Consensus 107 tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd----- 181 (314)
T KOG1444|consen 107 TVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVD----- 181 (314)
T ss_pred HHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 999999999999999999999999999999999999999999999999988999999999999999999999876
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhH
Q 023593 161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYL-SRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSL 239 (280)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~ 239 (280)
+.+.+.+++++|+++.+.|.+......+||++.. .+.+.+.++.++..+.++|+.+++++|+.++|.+.+|+++.++
T Consensus 182 --~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~ti 259 (314)
T KOG1444|consen 182 --SANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTI 259 (314)
T ss_pred --cccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceee
Confidence 3468899999999999999999999899998832 2345566777899999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
++...+..+.+.+.+++|+++++.+.+|+.+.+.|+++|
T Consensus 260 vG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y 298 (314)
T KOG1444|consen 260 VGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY 298 (314)
T ss_pred hhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence 995556666666666678999999999999999999876
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.3e-35 Score=260.70 Aligned_cols=268 Identities=15% Similarity=0.173 Sum_probs=218.2
Q ss_pred eeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhH
Q 023593 2 ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVT 81 (280)
Q Consensus 2 ~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 81 (280)
++.||++++ .+++|.++++.|+.++.+...+.++.+..+.++.++|+++++++.|++++.+..++|+|++|+++++++
T Consensus 18 ~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~ 95 (302)
T TIGR00817 18 NIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTH 95 (302)
T ss_pred HHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 467999998 578899999999999987776664444444556788999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 023593 82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVT 161 (280)
Q Consensus 82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~ 161 (280)
+++++.|+++++++++++|||++++++.+++++++|+.+....|.+.+..|+++++++++++|+|+++.||..++
T Consensus 96 li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~----- 170 (302)
T TIGR00817 96 TIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTI----- 170 (302)
T ss_pred HHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhcc-----
Confidence 999999999999999999999999999999999999998876677777789999999999999999999998652
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhh-cCC----CcchHHHHHHHHHHHHHHH-HHHHHHHHHhhcChh
Q 023593 162 KSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSR-TPL----LRLPSFWLVMTLSGFLGLA-ISFTSMWFLHQTGAT 235 (280)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~ 235 (280)
.+.|+.++..|++..+.+.+.|.....++.....+ ... ......+...+..+..+.. .+...+.++|++||.
T Consensus 171 --~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~ 248 (302)
T TIGR00817 171 --KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPL 248 (302)
T ss_pred --CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence 24788899999999999888888766554332111 000 0111123223333332222 333445789999999
Q ss_pred hHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 236 TYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 236 ~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
+.++.+++||++++++|++++||+++..+++|.++++.|...+
T Consensus 249 t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~ 291 (302)
T TIGR00817 249 THSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY 291 (302)
T ss_pred HHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998643
No 3
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=6.7e-35 Score=260.25 Aligned_cols=273 Identities=14% Similarity=0.185 Sum_probs=224.3
Q ss_pred eeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCc--HHhhhHHHHHHHHHHHHHHHhhhhhcccchhh
Q 023593 2 ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLT--WRLIKVWLPVNVIFVGMLITSMFSLKYINVAM 79 (280)
Q Consensus 2 ~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 79 (280)
++.||++++ .+|+|++++++|+.+++++..+.+..+.++.++++ +++++++++.|+++.......+.|++++++++
T Consensus 65 ~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~ 142 (350)
T PTZ00343 65 VVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSF 142 (350)
T ss_pred HHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 357999999 57889999999999998776665554444444443 45799999999999877777889999999999
Q ss_pred hHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 023593 80 VTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQ 159 (280)
Q Consensus 80 ~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~ 159 (280)
+++++++.|+++++++++++|||++++++++++++++|+.+.+.+|.++++.|++++++|++++|+|+++.||.+++.++
T Consensus 143 ~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~ 222 (350)
T PTZ00343 143 THVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSE 222 (350)
T ss_pred HHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999988888888899999999999999999999998875321
Q ss_pred cccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchh--hhh-hc----CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023593 160 VTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVD--YLS-RT----PLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQT 232 (280)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (280)
.+++.++.++..++...+.++.+|.....|+.. ... .. +.+.....+..++.+++..+..|...|.+++++
T Consensus 223 --~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~ 300 (350)
T PTZ00343 223 --IGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKV 300 (350)
T ss_pred --ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 112466777777778888888888776554321 111 10 111112234455667777777888888999999
Q ss_pred ChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 233 GATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 233 s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
||.+.++.+++||++++++|+++|||++|..+++|.++++.|.+++
T Consensus 301 s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 301 NQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred chhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998765
No 4
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-33 Score=238.42 Aligned_cols=271 Identities=18% Similarity=0.355 Sum_probs=234.7
Q ss_pred eeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcH-HhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593 2 ILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTW-RLIKVWLPVNVIFVGMLITSMFSLKYINVAMV 80 (280)
Q Consensus 2 ~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 80 (280)
.+.||++++.++||+|++++..|.+.+.+.....+..+..+.++.+. ..++..+++|+++++..+++|.|++++|++++
T Consensus 33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~ 112 (316)
T KOG1441|consen 33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFY 112 (316)
T ss_pred EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHH
Confidence 47899999999999999999999999988888887777666655544 46999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593 81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV 160 (280)
Q Consensus 81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 160 (280)
+++|++.|+++.++++++.+|++++..+.+++.+..|+.+.+..|.++|+.|+..++++.+..++++++.|+.+++.
T Consensus 113 q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~--- 189 (316)
T KOG1441|consen 113 QTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSK--- 189 (316)
T ss_pred HHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998632
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHH-HHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhH
Q 023593 161 TKSGNLNEFSMVLLNNSLSLPLGV-LLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSL 239 (280)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~ 239 (280)
+++.|+.+.++|+...+...++ |.....++...........+..++.. .+..++++..|...|.++.++||.+.++
T Consensus 190 --~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~sv~~f~~Nls~f~~ig~tSalT~~V 266 (316)
T KOG1441|consen 190 --GESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL-LLNSVLAFLLNLSAFLVIGRTSALTYSV 266 (316)
T ss_pred --ccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH-HHHHHHHHHHHHHHHHHHcccCchhhhh
Confidence 3579999999999999998888 76655443222100111122233333 4444899999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
.++.|.++.+..|+++|+|+.|+.+..|.++++.|..+|
T Consensus 267 ~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y 305 (316)
T KOG1441|consen 267 AGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLY 305 (316)
T ss_pred hccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998765
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=2.8e-28 Score=214.08 Aligned_cols=254 Identities=19% Similarity=0.195 Sum_probs=214.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHH
Q 023593 15 DAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVG 94 (280)
Q Consensus 15 ~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~ 94 (280)
++|.++++.|+.++.+.........+ .++.+++.++++++.++++.+...++|.|++|+|.|+++++|++.|++++++
T Consensus 30 ~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~ 107 (303)
T PF08449_consen 30 PFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL 107 (303)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence 37999999999999988877554333 1222445688999999999999999999999999999999999999999999
Q ss_pred HHHHhCcccCHHHHHHHHHHHHHHHHHhcCccc----cc------hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q 023593 95 EMYLFNKRHDNRVWAALFLMIISAISGGITDLS----FH------AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSG 164 (280)
Q Consensus 95 ~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~----~~------~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~ 164 (280)
+++++|||+++++++++++.++|+++...+|.+ .+ ..|+++.+++.+++|...++++|..++.
T Consensus 108 ~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~------- 180 (303)
T PF08449_consen 108 GVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKY------- 180 (303)
T ss_pred HHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 999999999999999999999999998665421 11 2399999999999999999999998865
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHH--hcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhh
Q 023593 165 NLNEFSMVLLNNSLSLPLGVLLVIV--FNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGS 242 (280)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~ 242 (280)
+.+++++++|+|..+.+...+.... .+|..+..++.. .++..+..++..++.+...+...+.+.++.||++.+++..
T Consensus 181 ~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t 259 (303)
T PF08449_consen 181 GKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTT 259 (303)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHH
Confidence 4678999999999999998887777 666655433221 2344566667777777777777788999999999999999
Q ss_pred hhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 243 LNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 243 l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
++++.++++++++||+++++.+|.|+++++.|+..+
T Consensus 260 ~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 260 LRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 999999999999999999999999999999998654
No 6
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.96 E-value=7.7e-29 Score=198.41 Aligned_cols=265 Identities=31% Similarity=0.561 Sum_probs=230.0
Q ss_pred CeeeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593 1 MILVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV 80 (280)
Q Consensus 1 ~~~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 80 (280)
|.+.||++++..+|+-...+.+.|..++.+-+.+.++.|..+.| ..+.|.++|++++...+.+.+..++||+++|.+
T Consensus 21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiY 97 (309)
T COG5070 21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIY 97 (309)
T ss_pred HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhcccceeeeeeeHH
Confidence 56789999999999877888999999998888877766554443 456899999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccc--------cchhhHHHHHHHHHHHHHHHHHHHH
Q 023593 81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLS--------FHAVGYAWQIINCFLTASYSLTLRR 152 (280)
Q Consensus 81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~--------~~~~G~~~~~~~~~~~a~~~i~~~~ 152 (280)
++.++++.+.++..+..++|.|.+..+..+-++.++......++|.+ .| .|++|+..++++.|++....||
T Consensus 98 TiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~NclssaafVL~mrk 176 (309)
T COG5070 98 TIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSSAAFVLIMRK 176 (309)
T ss_pred HHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888862 34 7999999999999999999999
Q ss_pred HhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023593 153 VMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQT 232 (280)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (280)
..+-+ |....+-++|+|+.+.|+++.+....|||++.- ......+.....++.+|+.++.+.|..-+|+|.+
T Consensus 177 ri~lt-------Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n-~annl~~d~l~am~ISgl~svgiSy~saWcvrVt 248 (309)
T COG5070 177 RIKLT-------NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN-LANNLSVDSLMAMFISGLCSVGISYCSAWCVRVT 248 (309)
T ss_pred hhccc-------ccchhhHHHHhhhHHHHHHHHHHHHhccCCcch-hhcCCChHHHHHHHHHHHHHhhhhhccceeEeeh
Confidence 76643 356678899999999999999999999987531 1111112225677889999999999998999999
Q ss_pred ChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 233 GATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 233 s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
|++++++++.+++......|.++|||+.+...+..+.+...+|..
T Consensus 249 SSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i 293 (309)
T COG5070 249 SSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI 293 (309)
T ss_pred hhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998877754
No 7
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.96 E-value=1.5e-26 Score=206.09 Aligned_cols=262 Identities=13% Similarity=0.150 Sum_probs=194.0
Q ss_pred eeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcC--ccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593 3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLG--VISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV 80 (280)
Q Consensus 3 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 80 (280)
...|.+++ .+.+ |..+.++|+.++.+++......+ ..+.++.++++++.+...|++......+.+++++|++++.+
T Consensus 30 ~~~k~a~~-~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa~~a 107 (358)
T PLN00411 30 TLFKVATS-KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNPTLA 107 (358)
T ss_pred HHHHHHHH-CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 35688876 4787 88899999999987776543221 12334445778888888888776666788999999999999
Q ss_pred HHhhhhHHHHHHHHHHHH------hCcccCHHHHHHHHHHHHHHHHHhcC-cc-----------------------ccc-
Q 023593 81 TVLKNVTNVITAVGEMYL------FNKRHDNRVWAALFLMIISAISGGIT-DL-----------------------SFH- 129 (280)
Q Consensus 81 ~~l~~~~pi~v~i~~~~~------l~e~~~~~~~~~~~l~~~Gv~l~~~~-~~-----------------------~~~- 129 (280)
.++.++.|++++++++++ +|||++++++.+++++++|+.+.... +. ..+
T Consensus 108 sll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (358)
T PLN00411 108 SAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDW 187 (358)
T ss_pred HHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccH
Confidence 999999999999999999 69999999999999999999976531 11 012
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHH
Q 023593 130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWL 209 (280)
Q Consensus 130 ~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (280)
..|..+.+.+++++|+|++..||..++.+ +......++...+.....+.....++.+. .......+.. ..
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~~~--------~~~~~t~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~-~~ 257 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSEYP--------AAFTVSFLYTVCVSIVTSMIGLVVEKNNP-SVWIIHFDIT-LI 257 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------cHhHHHHHHHHHHHHHHHHHHHHHccCCc-ccceeccchH-HH
Confidence 34999999999999999999999876432 22344455554444444333333332110 0000111223 23
Q ss_pred HHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 210 VMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
.+++.++.+ .+.|..| +++|+.+|.+.++..+++|++++++|++++||++++.+++|.++++.|..+
T Consensus 258 ~i~y~~i~t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l 325 (358)
T PLN00411 258 TIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYA 325 (358)
T ss_pred HHHHHHHHH-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 466667654 4566654 799999999999999999999999999999999999999999999999643
No 8
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.96 E-value=5.4e-26 Score=198.64 Aligned_cols=253 Identities=11% Similarity=-0.005 Sum_probs=199.0
Q ss_pred eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHH-HHHHHHhhhhh-cccchhhhH
Q 023593 4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIF-VGMLITSMFSL-KYINVAMVT 81 (280)
Q Consensus 4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al-~~~~~~~~~ 81 (280)
..|+..+ +.+ |..+++.|+.++.+++.+....++.+ ..++|++++....|.+. .....+.+++. +++|++.++
T Consensus 26 ~~K~~~~--~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~ 100 (292)
T PRK11272 26 VIRIGVE--SWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAA 100 (292)
T ss_pred HHHHHhc--cCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH
Confidence 4577766 677 99999999999987766543332222 22467788887888765 45667778888 999999999
Q ss_pred HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593 82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT-DLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV 160 (280)
Q Consensus 82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 160 (280)
++.++.|+++++++++ +|||++++++.+++++++|+.+...+ +.+.+..|..+++.+++++|.|+++.||..+
T Consensus 101 ~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~----- 174 (292)
T PRK11272 101 VVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPL----- 174 (292)
T ss_pred HHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence 9999999999999986 69999999999999999999987543 3345567999999999999999999999632
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhH
Q 023593 161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSL 239 (280)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~ 239 (280)
+ ++.....++...+.+...+.....++... ...+...|..+++.++++..+.+..+ +++|+.++.+.+.
T Consensus 175 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~ 244 (292)
T PRK11272 175 ----P-VGMMAGAAEMLAAGVVLLIASLLSGERLT-----ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS 244 (292)
T ss_pred ----C-cchHHHHHHHHHHHHHHHHHHHHcCCccc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 1 23445567777777766665543332111 11133447778888999888888775 6899999999999
Q ss_pred HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
+.+++|+.+.++|++++||+++..+++|.++++.|.++
T Consensus 245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~ 282 (292)
T PRK11272 245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVL 282 (292)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998753
No 9
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=9.3e-26 Score=193.80 Aligned_cols=251 Identities=13% Similarity=0.060 Sum_probs=198.0
Q ss_pred eeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhH
Q 023593 3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVT 81 (280)
Q Consensus 3 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~ 81 (280)
...|+.+++ ..| |..+.+.|+..+.+.+....+.+ .++++++..+..+.+ ..+...+.++|++|+|++..+
T Consensus 6 ~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ 77 (260)
T TIGR00950 6 VVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA 77 (260)
T ss_pred HHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence 356888774 455 89999999998887766544332 134556666666654 577888999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593 82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD-LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV 160 (280)
Q Consensus 82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 160 (280)
++.++.|+++++++.+++|||++++++.+++++++|+.++..++ .+.+..|+.++++++++++.+.++.||..++.
T Consensus 78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~--- 154 (260)
T TIGR00950 78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKE--- 154 (260)
T ss_pred HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC---
Confidence 99999999999999999999999999999999999998875443 34556899999999999999999999986521
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhH
Q 023593 161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSL 239 (280)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~ 239 (280)
+.++.....+.+..+.+...+.....++... . +...|..+++.++++..+.+..+ +++|+.++.+.+.
T Consensus 155 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~ 223 (260)
T TIGR00950 155 ----GPELLQFTGWVLLLGALLLLPFAWFLGPNPQ------A-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASI 223 (260)
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHHhcCCCCC------c-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 1223333335667777777666554433211 1 22336667778888888888765 6899999999999
Q ss_pred HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593 240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL 275 (280)
Q Consensus 240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~ 275 (280)
+.+++|+++.+++++++||+++..+++|..+++.|.
T Consensus 224 ~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 224 LALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999885
No 10
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=8.4e-29 Score=203.78 Aligned_cols=271 Identities=22% Similarity=0.315 Sum_probs=237.7
Q ss_pred CeeeehhHHhc--CCCChhHHHHHHHHHHHHHHHHHHHHc-----CccccC--cCcHHhhhHHHHHHHHHHHHHHHhhhh
Q 023593 1 MILVNKFVLSG--YNFDAGISLMVYQNFISVVTVTILSFL-----GVISTE--PLTWRLIKVWLPVNVIFVGMLITSMFS 71 (280)
Q Consensus 1 ~~~~nK~~l~~--~~f~~p~~l~~~r~~~~~~~l~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a 71 (280)
++|.||++++. ...+.|.++++.|......+.....+. +..+.+ +++.+..++.+|+++.+.++..++|++
T Consensus 43 ~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlc 122 (347)
T KOG1442|consen 43 LVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLC 122 (347)
T ss_pred hhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhcccee
Confidence 46899999996 344579999999999887666554322 112222 356678999999999999999999999
Q ss_pred hcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc---cccchhhHHHHHHHHHHHHHHHH
Q 023593 72 LKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD---LSFHAVGYAWQIINCFLTASYSL 148 (280)
Q Consensus 72 l~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~~~~~~~~a~~~i 148 (280)
|+|++++++.+-|+++.+|+.+++++++|+|-+.....++.+++.|-.+..-+| ...++.|.++++.++++-|+..+
T Consensus 123 L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnai 202 (347)
T KOG1442|consen 123 LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAI 202 (347)
T ss_pred hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998887776555 46778999999999999999999
Q ss_pred HHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 023593 149 TLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWF 228 (280)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (280)
++||.+..++ -.-|...+|+|..+..+.+|.....||.+.+..+|+..+..+|..+.++|++++.++|...+=
T Consensus 203 ytkk~l~~v~-------~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~Q 275 (347)
T KOG1442|consen 203 YTKKVLPPVG-------DCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQ 275 (347)
T ss_pred hhheeccccc-------CeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEE
Confidence 9999877543 245888999999999999999999999998888888777889999999999999999988888
Q ss_pred HhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 229 LHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 229 ~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
+|.+||.|+.+-+..|.+.+.+++..+++|.-+..-|-|-++++.|+.+|
T Consensus 276 IK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~Y 325 (347)
T KOG1442|consen 276 IKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAY 325 (347)
T ss_pred EEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHH
Confidence 99999999999999999999999999999999999999999999998775
No 11
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.95 E-value=8.4e-25 Score=191.73 Aligned_cols=257 Identities=11% Similarity=0.107 Sum_probs=188.2
Q ss_pred eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHH-HHHHHHhhhhhcc-cchhhhH
Q 023593 4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIF-VGMLITSMFSLKY-INVAMVT 81 (280)
Q Consensus 4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~-~~~~~~~ 81 (280)
..|..++ +++ |..+.++|+.++.+.+....+ + ++.+ ++..+..+++. ..+..+.+.+++| .|++.+.
T Consensus 22 ~~k~~~~--~~~-p~~~~~~R~~~a~~~l~~~~~--~---~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~ 90 (299)
T PRK11453 22 VIKVGLH--NMP-PLMLAGLRFMLVAFPAIFFVA--R---PKVP---LNLLLGYGLTISFGQFAFLFCAINFGMPAGLAS 90 (299)
T ss_pred HHHHHHh--cCC-HHHHHHHHHHHHHHHHHHHhc--C---CCCc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 4688777 688 999999999987655543321 1 1112 33444555543 3455566778888 6889999
Q ss_pred HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc---cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 023593 82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD---LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAK 158 (280)
Q Consensus 82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~ 158 (280)
++.++.|+++.+++++++|||++++++.+++++++|+.+...++ .+.+..|+.+++.+++++|.|+++.||..++.+
T Consensus 91 ~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~ 170 (299)
T PRK11453 91 LVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHST 170 (299)
T ss_pred HHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 99999999999999999999999999999999999999876432 233457999999999999999999999754211
Q ss_pred ccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhH
Q 023593 159 QVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTY 237 (280)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~ 237 (280)
..+......++...+...........++..+........++..|..+++.++++..++|..+ ..+++.+|.+.
T Consensus 171 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~ 244 (299)
T PRK11453 171 ------RPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRV 244 (299)
T ss_pred ------ccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 11223334444444433333222223322211110011234458888999999999999886 68999999999
Q ss_pred hHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 238 SLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 238 s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
+.+..++|+.+.++|++++||+++..+++|.++++.|..+
T Consensus 245 s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l 284 (299)
T PRK11453 245 APLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYI 284 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988743
No 12
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.94 E-value=5.3e-25 Score=192.64 Aligned_cols=246 Identities=11% Similarity=0.053 Sum_probs=178.7
Q ss_pred eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhc----ccchhh
Q 023593 4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLK----YINVAM 79 (280)
Q Consensus 4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----~~~~~~ 79 (280)
.+|..++ ++| |..+.+.|+..+.+++....+ + ++.++++++.....++.+.....+.+.+++ +.++..
T Consensus 22 ~~k~~~~--~~~-P~~~~~~R~~~a~l~l~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~ 93 (295)
T PRK11689 22 LIRGVSE--SLG-PVGGAAMIYSVSGLLLLLTVG--F---PRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIE 93 (295)
T ss_pred HHHHHHc--cCC-hHHHHHHHHHHHHHHHHHHcc--c---cccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchH
Confidence 4788887 688 999999999999877765421 1 111222334444444445566666666665 467788
Q ss_pred hHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccc-----------cchhhHHHHHHHHHHHHHHHH
Q 023593 80 VTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLS-----------FHAVGYAWQIINCFLTASYSL 148 (280)
Q Consensus 80 ~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-----------~~~~G~~~~~~~~~~~a~~~i 148 (280)
+.++.++.|+++++++++++|||++++++.+++++++|+.++..++.+ .+..|+.+++.+++++|.|++
T Consensus 94 a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v 173 (295)
T PRK11689 94 VGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCN 173 (295)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999987654321 234699999999999999999
Q ss_pred HHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-H
Q 023593 149 TLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-W 227 (280)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 227 (280)
+.||..++ .++... +... +...+.+.....++.. ...++..|..+++.++ +..+.|..+ +
T Consensus 174 ~~k~~~~~---------~~~~~~--~~~~-~~~~l~~~~~~~~~~~------~~~~~~~~~~l~~~~~-~t~~~~~l~~~ 234 (295)
T PRK11689 174 VTRKYARG---------KNGITL--FFIL-TALALWIKYFLSPQPA------MVFSLPAIIKLLLAAA-AMGFGYAAWNV 234 (295)
T ss_pred HHhhccCC---------CCchhH--HHHH-HHHHHHHHHHHhcCcc------ccCCHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 99997442 344432 2222 2222222222222211 1112334656667674 566667664 7
Q ss_pred HHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 228 FLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 228 ~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
++|+.+|.+.+...+++|++++++|++++||+++..+++|.++++.|..
T Consensus 235 al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~ 283 (295)
T PRK11689 235 GILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSL 283 (295)
T ss_pred HHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHH
Confidence 8999999999999999999999999999999999999999999999863
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.94 E-value=6.6e-24 Score=185.51 Aligned_cols=244 Identities=12% Similarity=0.021 Sum_probs=188.6
Q ss_pred eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh
Q 023593 4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL 83 (280)
Q Consensus 4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l 83 (280)
..|++++ +++ |..+.++|+.++.+++....+.++ ++.++|++++.+..|.+......+.+++++|+|++.++++
T Consensus 30 ~~K~~~~--~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l 103 (293)
T PRK10532 30 LAKSLFP--LVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVAL 103 (293)
T ss_pred HHHHHHH--HcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 4688887 577 899999999999877765432221 2345778888888888888888889999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC--c-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593 84 KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT--D-LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV 160 (280)
Q Consensus 84 ~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~--~-~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 160 (280)
..+.|+++++++ +||+++. ..+.++++|+.++... | .+.+..|..+++.+++++|.|.+..||..++
T Consensus 104 ~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~---- 173 (293)
T PRK10532 104 EFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE---- 173 (293)
T ss_pred HHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 999999999877 4666554 4466788999876432 2 2345679999999999999999999998542
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChhhHhH
Q 023593 161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSL 239 (280)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~s~ 239 (280)
.++..+ .++...+...+.+.....++ .. ..++..|...++.|++++.++|.. ++.+++.+|.+.+.
T Consensus 174 -----~~~~~~-~~~~~~~~~~l~~~~~~~~~-~~------~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~ 240 (293)
T PRK10532 174 -----HGPATV-AIGSLIAALIFVPIGALQAG-EA------LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT 240 (293)
T ss_pred -----CCchHH-HHHHHHHHHHHHHHHHHccC-cc------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence 345544 34555555555555443322 10 112334555678899999999977 47899999999999
Q ss_pred HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
..+++|+++.++|++++||+++..+++|.++++.|.+
T Consensus 241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~ 277 (293)
T PRK10532 241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASM 277 (293)
T ss_pred HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998864
No 14
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.93 E-value=5.4e-23 Score=180.03 Aligned_cols=249 Identities=11% Similarity=0.065 Sum_probs=171.0
Q ss_pred ehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHc-Cc-cccC-cC-cHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhh
Q 023593 5 NKFVLSGYNFDAGISLMVYQNFISVVTVTILSFL-GV-ISTE-PL-TWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMV 80 (280)
Q Consensus 5 nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~-~~-~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 80 (280)
.|+. . +.+ |..+.++|..++.+++...... +. .+.+ +. +++++......+.....++.+.++|++++|++.+
T Consensus 27 ~k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a 102 (296)
T PRK15430 27 FKLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA 102 (296)
T ss_pred HHHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 3653 3 577 9999999999988755443221 21 1110 11 2333333333345567789999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593 81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV 160 (280)
Q Consensus 81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 160 (280)
+++.++.|+++++++++++|||+++++|.+++++++|+.++..++.+. ..+++.+++++|.|.++.||..++
T Consensus 103 ~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~---- 174 (296)
T PRK15430 103 SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVE---- 174 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCC----
Confidence 999999999999999999999999999999999999999876433222 256888999999999998886321
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChhhHhH
Q 023593 161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSL 239 (280)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~s~ 239 (280)
...+......+....+.+...+ ..++... . ....+...+..+...|+. ..+.+.. +..+|+.+|.+.+.
T Consensus 175 ---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~-~~~~~~~~~~~~~~~g~~-t~i~~~~~~~a~~~~~a~~~s~ 244 (296)
T PRK15430 175 ---AQTGMLIETMWLLPVAAIYLFA---IADSSTS--H-MGQNPMSLNLLLIAAGIV-TTVPLLCFTAAATRLRLSTLGF 244 (296)
T ss_pred ---CchhHHHHHHHHHHHHHHHHHH---HccCCcc--c-ccCCcHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCHHHHHH
Confidence 1112222233333333322211 1111100 0 001111223344444554 4455555 47899999999999
Q ss_pred HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593 240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL 275 (280)
Q Consensus 240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~ 275 (280)
..+++|+++.++|++++||++++.+++|.++++.|.
T Consensus 245 ~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~ 280 (296)
T PRK15430 245 FQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVAL 280 (296)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997764
No 15
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.92 E-value=7.2e-24 Score=177.46 Aligned_cols=270 Identities=14% Similarity=0.179 Sum_probs=221.1
Q ss_pred eeehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccc----cCcCcHH-hhhHHHHHHHHHHHHHHHhhhhhcccch
Q 023593 3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVIS----TEPLTWR-LIKVWLPVNVIFVGMLITSMFSLKYINV 77 (280)
Q Consensus 3 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~al~~~~~ 77 (280)
+.+|+.-. .|++|.+++.+|+.+-.++....++..+++ ..+.+|+ ..|+..|.+++.+.+..++|+|++|++.
T Consensus 33 f~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtl 110 (349)
T KOG1443|consen 33 FYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTL 110 (349)
T ss_pred HHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeee
Confidence 45677554 578899999999998887776655432222 2345674 5888999999999999999999999999
Q ss_pred hhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 023593 78 AMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTA 157 (280)
Q Consensus 78 ~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~ 157 (280)
+.|++.|+.+++|+.+++.++.=||++|.-.+.+.++..|+.+.++.+.+++..|+.+...++++.++...++|+++++.
T Consensus 111 SlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~ 190 (349)
T KOG1443|consen 111 SLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQ 190 (349)
T ss_pred eeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcC
Confidence 99999999999999999999989999999999999999999999999999999999999999999999999999999864
Q ss_pred hccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhc-----CCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 023593 158 KQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRT-----PLLRL-PSFWLVMTLSGFLGLAISFTSMWFLHQ 231 (280)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (280)
+ ..+-+|.+..++........++|.....|++...... .+..+ ......+.+.|.+++......+..+.+
T Consensus 191 ~----~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~ 266 (349)
T KOG1443|consen 191 P----SAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSR 266 (349)
T ss_pred c----cccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeee
Confidence 4 2345677777777766677777777766655432211 11111 122345566777888888888889999
Q ss_pred cChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 232 TGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 232 ~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
++..+.++.+..|.+.+.++|....+|+++..+|.|..+++.|.+.+
T Consensus 267 Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 267 TSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred ccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999987654
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.89 E-value=1.7e-21 Score=169.40 Aligned_cols=245 Identities=13% Similarity=0.134 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHHHHHcC--ccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHH
Q 023593 21 MVYQNFISVVTVTILSFLG--VISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYL 98 (280)
Q Consensus 21 ~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~ 98 (280)
.+.+.....+.+......+ ..+.++.+++.++.....+........+.++++++.|++..+.+.++.|++++++++++
T Consensus 31 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~ 110 (281)
T TIGR03340 31 LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT 110 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH
Confidence 4555555554443332211 22223323344444444455667788899999999999999999999999999999999
Q ss_pred hCcccCHHHHHHHHHHHHHHHHHhcCcc-ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHH
Q 023593 99 FNKRHDNRVWAALFLMIISAISGGITDL-SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNS 177 (280)
Q Consensus 99 l~e~~~~~~~~~~~l~~~Gv~l~~~~~~-~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (280)
+|||+++++|.++.+++.|+.++..++. +.+..|..+++.++++++.|.+..||..++.+ ...+......++..
T Consensus 111 ~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-----~~~~~~~~~~~~~~ 185 (281)
T TIGR03340 111 LGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVP-----AFYSALGYLGIGFL 185 (281)
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchh-----cccccHHHHHHHHH
Confidence 9999999999999999999998765432 34457888999999999999998887633211 01112222222222
Q ss_pred HH-HHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHh
Q 023593 178 LS-LPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILL 255 (280)
Q Consensus 178 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~ 255 (280)
.. .+.... ....++. ... + .+.. +...++.+.+...+.|..+ +++++.++.+.+...+++|+++.++|+++
T Consensus 186 ~~~~~~~~~-~~~~~~~-~~~--~--~~~~-~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~ 258 (281)
T TIGR03340 186 AMGWPFLLL-YLKRHGR-SMF--P--YARQ-ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWF 258 (281)
T ss_pred HHHHHHHHH-HHHHhcc-chh--h--hHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHH
Confidence 21 222111 1111111 100 0 1112 3344566666677777654 78999999999999999999999999999
Q ss_pred ccccCcccchhhhHHhhhhhcc
Q 023593 256 FKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 256 f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
+||+++..+++|.++++.|..+
T Consensus 259 lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 259 LNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred hCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999753
No 17
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=7e-22 Score=159.81 Aligned_cols=252 Identities=14% Similarity=0.113 Sum_probs=207.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHH
Q 023593 13 NFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITA 92 (280)
Q Consensus 13 ~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~ 92 (280)
.|.+...+.+.|+.+..+..-+....+ +..++++-.-+.+..++.-+.+..+.+|.|+||+|.|+..+-+++.|+.++
T Consensus 49 ~FTfalaLVf~qC~~N~vfAkvl~~ir--~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVM 126 (337)
T KOG1580|consen 49 KFTFALALVFFQCTANTVFAKVLFLIR--KKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM 126 (337)
T ss_pred eehHHHHHHHHHHHHHHHHHHhheeec--ccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence 466788899999998888776543222 223344444678888899999999999999999999999999999999999
Q ss_pred HHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc-------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCC
Q 023593 93 VGEMYLFNKRHDNRVWAALFLMIISAISGGITDL-------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGN 165 (280)
Q Consensus 93 i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~-------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~ 165 (280)
+++..+.|++.+|++++.++++..|+++..+.+. +-...|=++.++|.....+....++|.-+.. .
T Consensus 127 ilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-------q 199 (337)
T KOG1580|consen 127 ILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-------Q 199 (337)
T ss_pred eeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhh-------c
Confidence 9999999999999999999999999999876532 1123688889999999999888888874432 2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhh
Q 023593 166 LNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNK 245 (280)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~ 245 (280)
-+.-++++|.|+-+...+....+++||......+.+ +.|..|.-+...++.++..+.+.|..+...+|++-|++...++
T Consensus 200 ~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~-RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRK 278 (337)
T KOG1580|consen 200 RTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQ-RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRK 278 (337)
T ss_pred cCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHH-hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHH
Confidence 355678999999988888777778898766554332 3445566666678888888998999999999999999999999
Q ss_pred HHHHHHHHHhccccCcccchhhhHHhhhh
Q 023593 246 IPLSVAGILLFKVPTSLENSASIFFGKLA 274 (280)
Q Consensus 246 v~~~~~~~~~f~e~~~~~~~~G~~l~~~g 274 (280)
.++++.++++|+++++.+||+|.++++.|
T Consensus 279 fFTil~SVllf~npls~rQwlgtvlVF~a 307 (337)
T KOG1580|consen 279 FFTILISVLLFNNPLSGRQWLGTVLVFSA 307 (337)
T ss_pred HHHHHHHHHHhcCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999987
No 18
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.87 E-value=7.3e-20 Score=160.34 Aligned_cols=253 Identities=10% Similarity=0.068 Sum_probs=189.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHH--HcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHH
Q 023593 13 NFDAGISLMVYQNFISVVTVTILS--FLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVI 90 (280)
Q Consensus 13 ~f~~p~~l~~~r~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~ 90 (280)
+.+.|.+-++..+..-.++..... +.+..+..+..++++++++.++++-...+++.+.|++|++++.++++.++..++
T Consensus 39 ~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~ 118 (334)
T PF06027_consen 39 GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPF 118 (334)
T ss_pred CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHH
Confidence 677788888777766555443322 222222223334668888889999999999999999999999999999999999
Q ss_pred HHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc---------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 023593 91 TAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL---------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVT 161 (280)
Q Consensus 91 v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~ 161 (280)
+++++++++|+|+++.+++|+++.++|+.++...|. +....|+++++.+++.||+++++.|+..++
T Consensus 119 ~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~----- 193 (334)
T PF06027_consen 119 VMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKK----- 193 (334)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence 999999999999999999999999999998766542 123689999999999999999999998763
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHH
Q 023593 162 KSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLV 240 (280)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~ 240 (280)
.+..+......+.+.++..+..... |.+.+.+. +|. +..+..++.-+ .+....|... ..++..||+..++-
T Consensus 194 ----~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~-~w~-~~~~~~~v~~~-~~lf~~y~l~p~~l~~ssAt~~nLs 265 (334)
T PF06027_consen 194 ----APRVEFLGMLGLFGFIISGIQLAIL-ERSGIESI-HWT-SQVIGLLVGYA-LCLFLFYSLVPIVLRMSSATFFNLS 265 (334)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhcc-CCC-hhhHHHHHHHH-HHHHHHHHHHHHHHHhCccceeehH
Confidence 4556666666666666666554443 33333222 222 22233222222 2233344433 56889999988887
Q ss_pred hhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 241 ~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
.....+.+++.++.+||+++++..++|.++++.|-+.+
T Consensus 266 LLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy 303 (334)
T PF06027_consen 266 LLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVY 303 (334)
T ss_pred HHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheE
Confidence 77789999999999999999999999999999997654
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.87 E-value=1.6e-19 Score=154.83 Aligned_cols=228 Identities=11% Similarity=0.127 Sum_probs=155.7
Q ss_pred eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHH-HcCcc-----ccCcCcHHh-hhHHHHHHHHHHHHHHHhhhhhcccc
Q 023593 4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILS-FLGVI-----STEPLTWRL-IKVWLPVNVIFVGMLITSMFSLKYIN 76 (280)
Q Consensus 4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~-~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~~ 76 (280)
..|+ .. +.+ |..+.++|+.++.+++.+.. ..++. +.++.++++ +......+++...++.+.++|+++++
T Consensus 20 ~~k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~ 95 (256)
T TIGR00688 20 YSKL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGS 95 (256)
T ss_pred HHHH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 3466 33 577 99999999999887755432 22211 111112222 33456667778889999999999999
Q ss_pred hhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 023593 77 VAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDT 156 (280)
Q Consensus 77 ~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~ 156 (280)
++.++++.++.|+++++++++++|||++++++.+++++++|+.++..++.+.+ .+++.+++++|.|.+..||..++
T Consensus 96 ~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~~ 171 (256)
T TIGR00688 96 SLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKNT 171 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999987754322211 45788999999999999996331
Q ss_pred hhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChh
Q 023593 157 AKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGAT 235 (280)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~ 235 (280)
+..+... ......|...+.... +++... +.......|..+++.|+. ..+.|.. ..+.|+.+|.
T Consensus 172 ----------~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~ 235 (256)
T TIGR00688 172 ----------DLAGFCL-ETLSLMPVAIYYLLQ-TDFATV---QQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLN 235 (256)
T ss_pred ----------CcchHHH-HHHHHHHHHHHHHHH-hccCcc---cccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChH
Confidence 1122222 122233333222211 111110 001111135666677776 4556655 4789999999
Q ss_pred hHhHHhhhhhHHHHHHHHHh
Q 023593 236 TYSLVGSLNKIPLSVAGILL 255 (280)
Q Consensus 236 ~~s~~~~l~~v~~~~~~~~~ 255 (280)
+.+...+++|+++.++|++.
T Consensus 236 ~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 236 LLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999764
No 20
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=2.4e-20 Score=156.48 Aligned_cols=256 Identities=11% Similarity=0.089 Sum_probs=213.7
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHH
Q 023593 11 GYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVI 90 (280)
Q Consensus 11 ~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~ 90 (280)
+..|..|.++.++|-..+.++........+.+.+ ..+.++++..+++.....-.+++.||+|+|-|+.++.+++.-+.
T Consensus 45 ~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~--~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIP 122 (327)
T KOG1581|consen 45 GERFEHSLFLVFCQRLVALLVSYAMLKWWKKELS--GVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIP 122 (327)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHhcccccCC--CCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhH
Confidence 3467779999999999999999776544333322 34568899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC---cc------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 023593 91 TAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT---DL------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVT 161 (280)
Q Consensus 91 v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~---~~------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~ 161 (280)
+++++.++.|+|+++.+++...++..|+.+.... |. ..++.|+.++..+....++-+..++++.++.
T Consensus 123 Vmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~---- 198 (327)
T KOG1581|consen 123 VMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY---- 198 (327)
T ss_pred HHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC----
Confidence 9999999999999999999999999999876543 20 2346899999999999999999999998853
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHh
Q 023593 162 KSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVG 241 (280)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~ 241 (280)
+.++++++++.|+.+.+......+..+.+.+...+- ..+|+++.=+++.+..+...+.+.+.-+++.+|.+...+.
T Consensus 199 ---k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~-~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ 274 (327)
T KOG1581|consen 199 ---KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFI-KEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIM 274 (327)
T ss_pred ---CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHH-HcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHH
Confidence 689999999999999988877765555554433221 1234555555555777788888888999999999999999
Q ss_pred hhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 242 SLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 242 ~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
..|+.+++.++.++||++.++.|+.|+.+++.|..
T Consensus 275 ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~ 309 (327)
T KOG1581|consen 275 TTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIF 309 (327)
T ss_pred HHHHHHHHHHHHHHhCCccchhhccCeeeehHHHH
Confidence 99999999999999999999999999999988753
No 21
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.1e-20 Score=155.86 Aligned_cols=262 Identities=16% Similarity=0.090 Sum_probs=210.0
Q ss_pred hhHHhcCCCC-hhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhh
Q 023593 6 KFVLSGYNFD-AGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK 84 (280)
Q Consensus 6 K~~l~~~~f~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~ 84 (280)
.++++..+|+ +.|.+++.|+.+...+..+....-..+.+. ..||.+..++.+..+...++|.|+.|+|.|+..+.+
T Consensus 63 Elif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~---iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFK 139 (367)
T KOG1582|consen 63 ELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRV---IPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFK 139 (367)
T ss_pred HHHhccccCcccchHHHHHHHHHHHhhhheEEEeeccccee---cchhHhhhhHhhhhhccccCcCccccccCcHHHHHH
Confidence 3456666776 889999999998876666532211111122 238888999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc----cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 023593 85 NVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD----LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQV 160 (280)
Q Consensus 85 ~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~----~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~ 160 (280)
+|..+.+++.+.++.++|..+.++.+..+..+|.++....| +++|..|++..-.+.++.|+-...++|.++..+
T Consensus 140 ccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~-- 217 (367)
T KOG1582|consen 140 CCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNP-- 217 (367)
T ss_pred hhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCC--
Confidence 99999999999999999999999999999999999987665 467889999999999999999999999988543
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHH
Q 023593 161 TKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLV 240 (280)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~ 240 (280)
.+..++++|+..++.|.+......+||....+.+...++.......++-+..++....+....+|..++.++..+
T Consensus 218 -----~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatv 292 (367)
T KOG1582|consen 218 -----ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATV 292 (367)
T ss_pred -----CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHH
Confidence 466888999999999988877778888766554432223323333333344445444445567999999999999
Q ss_pred hhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 241 GSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 241 ~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
+..++.+++++++++|.+++|.+..-|..+++.|..+
T Consensus 293 TTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~L 329 (367)
T KOG1582|consen 293 TTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYL 329 (367)
T ss_pred HHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHh
Confidence 9999999999999999999998888888888888653
No 22
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.84 E-value=4.2e-18 Score=147.90 Aligned_cols=242 Identities=16% Similarity=0.200 Sum_probs=174.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHH
Q 023593 17 GISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEM 96 (280)
Q Consensus 17 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~ 96 (280)
+......|...+.+........++.+..+..++.++..+..++.......+.+.++++++++.++.+.++.|+++.++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~ 115 (292)
T COG0697 36 FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAV 115 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 45566668888887743333222111111111222344444455677888999999999999999999999999999997
Q ss_pred -HHhCcccCHHHHHHHHHHHHHHHHHhcCcccc---chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHH
Q 023593 97 -YLFNKRHDNRVWAALFLMIISAISGGITDLSF---HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMV 172 (280)
Q Consensus 97 -~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~---~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 172 (280)
+++|||++++++.++++.+.|+.++..++... +..|..+++.+++++|++.+..|+.. + .++....
T Consensus 116 ~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~---------~~~~~~~ 185 (292)
T COG0697 116 LLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R---------LGPVTLA 185 (292)
T ss_pred HHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C---------CChHHHH
Confidence 66799999999999999999999987765433 25899999999999999999999975 2 3444444
Q ss_pred H-HHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChhhHhHHhhhhhHHHHH
Q 023593 173 L-LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSLVGSLNKIPLSV 250 (280)
Q Consensus 173 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~s~~~~l~~v~~~~ 250 (280)
. ++.. ... .........+.. ...+...+..+.+.|+.+..+.+.. +...++.++...+....++|+.+.+
T Consensus 186 ~~~~~~-~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 257 (292)
T COG0697 186 LLLQLL-LAL-LLLLLFFLSGFG------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAAL 257 (292)
T ss_pred HHHHHH-HHH-HHHHHHHhcccc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 4 3322 111 111111111111 1112233666777788888766665 4689999999999999999999999
Q ss_pred HHHHhccccCcccchhhhHHhhhhhc
Q 023593 251 AGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 251 ~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
++++++||+++..+++|+.+++.|..
T Consensus 258 ~~~l~~~e~~~~~~~~G~~li~~g~~ 283 (292)
T COG0697 258 LGVLLLGEPLSPAQLLGAALVVLGVL 283 (292)
T ss_pred HHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999888864
No 23
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.81 E-value=1.8e-17 Score=135.78 Aligned_cols=234 Identities=15% Similarity=0.056 Sum_probs=186.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHH
Q 023593 17 GISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEM 96 (280)
Q Consensus 17 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~ 96 (280)
|.-.+++|..++.+++....|.-+ ++.++++++.....|+....++.+++.|++++|.+.+..+.++-|+.+++++
T Consensus 40 ~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~- 115 (292)
T COG5006 40 AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS- 115 (292)
T ss_pred hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh-
Confidence 778899999999988877654322 4567888999999999999999999999999999999999999999988765
Q ss_pred HHhCcccCHHHHHHHHHHHHHHHHHhcC---ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHH
Q 023593 97 YLFNKRHDNRVWAALFLMIISAISGGIT---DLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVL 173 (280)
Q Consensus 97 ~~l~e~~~~~~~~~~~l~~~Gv~l~~~~---~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (280)
.+|. ++..-+.+++.|+.+..-. ..+.|..|..+++.+..+|+.|-+.-||.-+. .+.-+-+.
T Consensus 116 ---sRr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~---------~~g~~g~a 181 (292)
T COG5006 116 ---SRRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA---------EHGTAGVA 181 (292)
T ss_pred ---ccch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc---------CCCchHHH
Confidence 3333 3445556677888766432 24678899999999999999999999998431 23333355
Q ss_pred HHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HHHHhhcChhhHhHHhhhhhHHHHHHH
Q 023593 174 LNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTS-MWFLHQTGATTYSLVGSLNKIPLSVAG 252 (280)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~s~~~~l~~v~~~~~~ 252 (280)
+.+..+.+...|+.....+. ...+++....-+..++++..+-|+. ..+.++.++.+.++...+||..+...|
T Consensus 182 ~gm~vAaviv~Pig~~~ag~-------~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G 254 (292)
T COG5006 182 VGMLVAALIVLPIGAAQAGP-------ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSG 254 (292)
T ss_pred HHHHHHHHHHhhhhhhhcch-------hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHH
Confidence 66666666666665433221 2234555555566799999999986 678999999999999999999999999
Q ss_pred HHhccccCcccchhhhHHhhhhh
Q 023593 253 ILLFKVPTSLENSASIFFGKLAL 275 (280)
Q Consensus 253 ~~~f~e~~~~~~~~G~~l~~~g~ 275 (280)
++++||++|..||+|++.++.++
T Consensus 255 ~i~L~e~ls~~qwlaI~~ViaAs 277 (292)
T COG5006 255 LIFLGETLTLIQWLAIAAVIAAS 277 (292)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999998875
No 24
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.79 E-value=2.9e-17 Score=139.07 Aligned_cols=211 Identities=17% Similarity=0.246 Sum_probs=165.8
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc-
Q 023593 48 WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL- 126 (280)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~- 126 (280)
+|+..++...++++...+.+.+.++++++++++++++++..+++++++++++|+|.+++||.++++.++|+.+...++.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 4566677777999999999999999999999999999999999999999999999999999999999999998743211
Q ss_pred --------c--------cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHh
Q 023593 127 --------S--------FHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVF 190 (280)
Q Consensus 127 --------~--------~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (280)
+ ....|+...+.++++.++..++.+|.+|+. +.+.+.........+.++..+....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~-------~~s~~~~N~qL~~~gi~~~~~~~~~- 165 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS-------NVSLWIQNMQLYLFGILFNLLALLL- 165 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc-------chhHHHHHHHHHHHHHHHHHHHHhc-
Confidence 1 125799999999999999999999999853 2444444444445566655544332
Q ss_pred cchhhhhhcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhh
Q 023593 191 NEVDYLSRTP--LLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASI 268 (280)
Q Consensus 191 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~ 268 (280)
.+.+...+.. +..++..|..+...++.|...++ .+|+.+...-.....+..+.+.+.++.+||.+++....+|.
T Consensus 166 ~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~ 241 (244)
T PF04142_consen 166 SDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGA 241 (244)
T ss_pred ccccccccCCchhhcchHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhe
Confidence 3333222111 12234457777777777777665 78999999999999999999999999999999999999987
Q ss_pred HH
Q 023593 269 FF 270 (280)
Q Consensus 269 ~l 270 (280)
.+
T Consensus 242 ~~ 243 (244)
T PF04142_consen 242 AL 243 (244)
T ss_pred ec
Confidence 65
No 25
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.78 E-value=9.8e-17 Score=139.89 Aligned_cols=236 Identities=14% Similarity=0.139 Sum_probs=168.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHH-HcCccccCcCc-HHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhh-hHHH
Q 023593 13 NFDAGISLMVYQNFISVVTVTILS-FLGVISTEPLT-WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKN-VTNV 89 (280)
Q Consensus 13 ~f~~p~~l~~~r~~~~~~~l~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~pi 89 (280)
+++.++.. |..++.++..... ..+. ++.+ ++.+..-+..|+.+...+.+.+.|.++++++.+..+.+ +.|+
T Consensus 25 g~~~~~~~---~~~~g~l~~~~~~~~~~~---~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v 98 (290)
T TIGR00776 25 GGPYSQTL---GTTFGALILSIAIAIFVL---PEFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLV 98 (290)
T ss_pred CCHHHHHH---HHHHHHHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHH
Confidence 45534432 6666665554332 2221 1111 22233334445556777899999999999999999988 8888
Q ss_pred HHHHHHHHHhCcccCHHH----HHHHHHHHHHHHHHhcCccc-------cc-hhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 023593 90 ITAVGEMYLFNKRHDNRV----WAALFLMIISAISGGITDLS-------FH-AVGYAWQIINCFLTASYSLTLRRVMDTA 157 (280)
Q Consensus 90 ~v~i~~~~~l~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~-------~~-~~G~~~~~~~~~~~a~~~i~~~~~~~~~ 157 (280)
+..+.+.+++|||.++++ +.+++++++|+.+....+.+ .+ .+|++++++++++++.|.+..|+.
T Consensus 99 ~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~---- 174 (290)
T TIGR00776 99 GGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF---- 174 (290)
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHc----
Confidence 999999999999999999 99999999999887553211 33 689999999999999999999986
Q ss_pred hccccCCCCChhHHHHHHHH----HHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHh-h
Q 023593 158 KQVTKSGNLNEFSMVLLNNS----LSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLH-Q 231 (280)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~ 231 (280)
+.|+++..+.+.. .+.....+. ....++ .+...+..++ .|++ ..+.+..+ ...+ +
T Consensus 175 -------~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~ 235 (290)
T TIGR00776 175 -------GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKPL---------KKYAILLNIL-PGLM-WGIGNFFYLFSAQPK 235 (290)
T ss_pred -------CCCcceehhHHHHHHHHHHHHHHHHH-hcccch---------HHHHHHHHHH-HHHH-HHHHHHHHHHHcccc
Confidence 2466666444443 222222221 000111 1122244444 7888 57777665 5677 8
Q ss_pred cChhhHhHHhhhhhHHHHHHHHHhccccCcccch----hhhHHhhhhhcc
Q 023593 232 TGATTYSLVGSLNKIPLSVAGILLFKVPTSLENS----ASIFFGKLALLN 277 (280)
Q Consensus 232 ~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~----~G~~l~~~g~~~ 277 (280)
.++.+.++++.++|+.+++.+++++||+.+..|+ +|.++++.|.++
T Consensus 236 ~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l 285 (290)
T TIGR00776 236 VGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI 285 (290)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999998764
No 26
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=1.4e-18 Score=143.86 Aligned_cols=250 Identities=16% Similarity=0.192 Sum_probs=194.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-HcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcc-cchhhhHHhhhhHHHHHHH
Q 023593 16 AGISLMVYQNFISVVTVTILS-FLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKY-INVAMVTVLKNVTNVITAV 93 (280)
Q Consensus 16 ~p~~l~~~r~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~v~i 93 (280)
....+++.|+.+...-..+.. ..+..+ ++++ .|.+...-..|+..++++|+++++ +|.|...++|+-+++.+++
T Consensus 32 sgNLITFaqFlFia~eGlif~skf~~~k-~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~ 107 (330)
T KOG1583|consen 32 SGNLITFAQFLFIATEGLIFTSKFFTVK-PKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI 107 (330)
T ss_pred CeeehHHHHHHHHHHhceeeeccccccC-CCCc---hhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence 456889999987776665532 122222 3444 566667777888999999999999 9999999999999999999
Q ss_pred HHHHHhCcccCHHHHHHHHHHHHHHHHHhcC---ccc------------cc----hhhHHHHHHHHHHHHHHHHHHHHHh
Q 023593 94 GEMYLFNKRHDNRVWAALFLMIISAISGGIT---DLS------------FH----AVGYAWQIINCFLTASYSLTLRRVM 154 (280)
Q Consensus 94 ~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~---~~~------------~~----~~G~~~~~~~~~~~a~~~i~~~~~~ 154 (280)
++++++|+|.+.+|+.+++...+|+++.+.. |.+ .+ ..|+.+..++.+..|.-.+++++..
T Consensus 108 ~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y 187 (330)
T KOG1583|consen 108 LGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTY 187 (330)
T ss_pred HHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876431 211 11 2699999999999999999999999
Q ss_pred hhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhh----hc-----CC--CcchHHHHHHHHHHHHHHHHHH
Q 023593 155 DTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLS----RT-----PL--LRLPSFWLVMTLSGFLGLAISF 223 (280)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~--~~~~~~~~~~~~~~~~~~~~~~ 223 (280)
|+++ =++.+.++|+...+.|..+.. .+|..+.+ .. |. ..-|..|..++.+.+.-+...-
T Consensus 188 ~kyG-------Kh~~EalFytH~LsLP~Flf~---~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~Cik 257 (330)
T KOG1583|consen 188 QKYG-------KHWKEALFYTHFLSLPLFLFM---GDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIK 257 (330)
T ss_pred HHhc-------CChHHHHHHHHHhccchHHHh---cchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHH
Confidence 9876 267788999999998877642 23332221 11 11 1234557777777766555444
Q ss_pred HHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccCC
Q 023593 224 TSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNGL 279 (280)
Q Consensus 224 ~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~~ 279 (280)
..+..-..+++++.+++-++++.++++++++.|++++|+..|+|..+++.|++|+-
T Consensus 258 gVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 258 GVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred hhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 44556667999999999999999999999999999999999999999999998763
No 27
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.75 E-value=4.5e-17 Score=128.74 Aligned_cols=145 Identities=19% Similarity=0.373 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcC-----CCc-ch
Q 023593 132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTP-----LLR-LP 205 (280)
Q Consensus 132 G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~ 205 (280)
|+++++.+.++.|+++++.||.+++.+ .++++.++.++++|++..+.+.+.|.....|+++...... +.. ++
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~--~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 78 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVS--SNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDP 78 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchH
Confidence 788999999999999999999988632 2245789999999999999999999888887765322111 111 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 206 SFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
..+..++.+|++++..++..+.+++++||.+.++.+++|.+..++.|+++|||++|..+++|+++++.|..+|
T Consensus 79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 5678889999999999999999999999999999999999999999999999999999999999999999876
No 28
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.4e-14 Score=125.06 Aligned_cols=217 Identities=15% Similarity=0.181 Sum_probs=169.2
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC-----
Q 023593 50 LIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT----- 124 (280)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~----- 124 (280)
+.......+++|..++...+.++.+.+++++++..++..+.|+++..+++|||.+++||.++++.++|+.+...+
T Consensus 91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~ 170 (345)
T KOG2234|consen 91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT 170 (345)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 444566668899998889999999999999999999999999999999999999999999999999999998621
Q ss_pred c------cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhh
Q 023593 125 D------LSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSR 198 (280)
Q Consensus 125 ~------~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (280)
+ .+..+.|....+.++.+.++.++|.+|+++. .+.+.|....-....+.++........ |.....+
T Consensus 171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~-------s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~ 242 (345)
T KOG2234|consen 171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKG-------SNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINE 242 (345)
T ss_pred CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhc-------CCchHHHHHHHHHHHHHHHHHHHHhhc-ccccccc
Confidence 1 1233689999999999999999999999874 234544444433445555444433332 3332211
Q ss_pred --cCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 199 --TPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
+-..++...|..++..++.|..++. ..|+.+-..-.....+..+.+.+.++.+||.++|....+|+.+++.+..
T Consensus 243 ~gff~G~s~~vw~vVl~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~ 318 (345)
T KOG2234|consen 243 YGFFYGYSSIVWLVVLLNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIF 318 (345)
T ss_pred CCccccccHHHHHHHHHHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHH
Confidence 1122344568888889999888876 6777777777777777889999999999999999999999999999877
Q ss_pred cC
Q 023593 277 NG 278 (280)
Q Consensus 277 ~~ 278 (280)
+|
T Consensus 319 lY 320 (345)
T KOG2234|consen 319 LY 320 (345)
T ss_pred Hh
Confidence 65
No 29
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.63 E-value=8.5e-15 Score=126.46 Aligned_cols=212 Identities=17% Similarity=0.108 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc------
Q 023593 53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL------ 126 (280)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~------ 126 (280)
.-+..+.+.+..+++.|.||.+++++..+++.+++-+||..++.++..||+++.+.+++++.+.|++++..+|.
T Consensus 161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~ 240 (416)
T KOG2765|consen 161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDL 240 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccC
Confidence 33444445567788889999999999999999999999999999999999999999999999999999887743
Q ss_pred --ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHH---hcchhhhhhcCC
Q 023593 127 --SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIV---FNEVDYLSRTPL 201 (280)
Q Consensus 127 --~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 201 (280)
+-...|.++++++++.||.|.++.||-..+.+ .+.|--...-|..++...++.|.... +++.. ++.|.
T Consensus 241 ~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg-----~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~--F~lP~ 313 (416)
T KOG2765|consen 241 PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEG-----ERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER--FELPS 313 (416)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhccccc-----ccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc--ccCCC
Confidence 23368999999999999999999999765421 35554433334444444444432221 22211 22232
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhh
Q 023593 202 LRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLA 274 (280)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g 274 (280)
+.. ...++..+..+.+++=..| ++.-.++|+...+-..+..+.+++...++=|.++++..++|...++.|
T Consensus 314 --~~q-~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~ 384 (416)
T KOG2765|consen 314 --STQ-FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVG 384 (416)
T ss_pred --Cce-eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 222 2344555666666654444 567789999999999999999999999988999999999999998877
No 30
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.62 E-value=7.5e-13 Score=111.48 Aligned_cols=244 Identities=13% Similarity=0.170 Sum_probs=177.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHH-Hc-CccccCcC--cHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHH
Q 023593 13 NFDAGISLMVYQNFISVVTVTILS-FL-GVISTEPL--TWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTN 88 (280)
Q Consensus 13 ~f~~p~~l~~~r~~~~~~~l~~~~-~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p 88 (280)
+.| +..+...|...+..+..... .. +..+..+. ++|.+......++.-..++....+|..+-.+-.+++=....|
T Consensus 31 ~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InP 109 (293)
T COG2962 31 PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINP 109 (293)
T ss_pred cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHH
Confidence 455 77888899887775554432 12 22222221 122333344445556678888999999988888889999999
Q ss_pred HHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCCh
Q 023593 89 VITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNE 168 (280)
Q Consensus 89 i~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~ 168 (280)
++..+++.+++|||+++.||+++.++.+||..-.....++++.++.. ++++++|...-|+. +.|+
T Consensus 110 L~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Ygl~RK~~-----------~v~a 174 (293)
T COG2962 110 LVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLYGLLRKKL-----------KVDA 174 (293)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHHHHHHHhc-----------CCch
Confidence 99999999999999999999999999999998877776777666554 56788888765554 3566
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHH
Q 023593 169 FSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIP 247 (280)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~ 247 (280)
.+-...-.+.-.|+...+....++..+... ..+...+..++.+|.. +.+....| ..-|+.+=.+.++..+++|..
T Consensus 175 ~~g~~lE~l~l~p~al~yl~~l~~~~~~~~---~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl 250 (293)
T COG2962 175 LTGLTLETLLLLPVALIYLLFLADSGQFLQ---QNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTL 250 (293)
T ss_pred HHhHHHHHHHHhHHHHHHHHHHhcCchhhh---cCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 665666666667777666655444332111 1123346667777776 44555555 578999999999999999999
Q ss_pred HHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 248 LSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 248 ~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
...+++.++||+++..+....+.+..|-.
T Consensus 251 ~fllav~i~~E~~~~~~~~~F~~IW~aL~ 279 (293)
T COG2962 251 MFLLAVLIFGEPFDSDQLVTFAFIWLALA 279 (293)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999888877643
No 31
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.57 E-value=5.9e-16 Score=127.84 Aligned_cols=206 Identities=11% Similarity=0.056 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC-----c----
Q 023593 55 LPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT-----D---- 125 (280)
Q Consensus 55 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~-----~---- 125 (280)
..-|+.........+||++|+|.+.+.++..++|.+|.++++.++||+.++.+.++..+.+.||.++..+ |
T Consensus 101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g 180 (346)
T KOG4510|consen 101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEG 180 (346)
T ss_pred EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccc
Confidence 3346776777888899999999999999999999999999999999999999999999999999987432 1
Q ss_pred --c---ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcC
Q 023593 126 --L---SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTP 200 (280)
Q Consensus 126 --~---~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (280)
. +.+..|-..++.+++..|---+..|++-+ +.+....+-|...++.+...+.....++++-..
T Consensus 181 ~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk---------~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~--- 248 (346)
T KOG4510|consen 181 EDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK---------NAHAIMSVSYFSLITLVVSLIGCASIGAVQLPH--- 248 (346)
T ss_pred cccccccccCCchHHHHHhHhhhhhHHHHHHHhhc---------cccEEEEehHHHHHHHHHHHHHHhhccceecCc---
Confidence 1 23456877788888877777777787633 445544445555555555555444445443211
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593 201 LLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL 275 (280)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~ 275 (280)
...+ |..++..|++|+..+......+..-.+...++..+.+-+++.+..+++|||.||+.+|.|+++++.+.
T Consensus 249 cgkd---r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~ 320 (346)
T KOG4510|consen 249 CGKD---RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSST 320 (346)
T ss_pred cccc---eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhH
Confidence 1223 44556679999999988887777777777788889999999999999999999999999999887654
No 32
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.42 E-value=3.7e-12 Score=106.94 Aligned_cols=188 Identities=18% Similarity=0.169 Sum_probs=130.8
Q ss_pred cchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc---------------------------c
Q 023593 75 INVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL---------------------------S 127 (280)
Q Consensus 75 ~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------------------------~ 127 (280)
+++|.....++..|+++++.+....+||.+..++++..+...|+.....+|. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 5788999999999999999999999999999999999999999875332221 1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhc----chhhhhhcC--C
Q 023593 128 FHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFN----EVDYLSRTP--L 201 (280)
Q Consensus 128 ~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~ 201 (280)
....|....+.++.+.++.+++++|..+.. +. ++|.+....+...+.....+ +.......+ .
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~-------~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG-------DT-----MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFI 149 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCC-------CC-----chHHHHHHHHHHHHHHHHHHHhhcccchhhccCccc
Confidence 224566666777777888888888875421 11 24444444444433321111 111111111 1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 202 LRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
..+...|...+..++.+.+ ..+++|+.++.+.++...++++.+.++++++|||+++..++.|+.+++.|..+|
T Consensus 150 ~~~~~~~~~~~~~a~~~~~----v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 150 GYPTAVWIVGLLNVGGGLC----IGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred CCchHHHHHHHHHHhcCce----eeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 1122234444444444333 345899999999999999999999999999999999999999999999998764
No 33
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.41 E-value=1.1e-11 Score=103.47 Aligned_cols=221 Identities=18% Similarity=0.172 Sum_probs=166.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc-----
Q 023593 52 KVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL----- 126 (280)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~----- 126 (280)
+..++.++|-....-+-+.++.+++++.+|++|-...+|+.+++..+++++.+.++|+++....+|+..+...|.
T Consensus 87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~ 166 (372)
T KOG3912|consen 87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD 166 (372)
T ss_pred ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence 346677888888888888999999999999999999999999999999999999999999999999998755432
Q ss_pred -----ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhc--c-hhhhhh
Q 023593 127 -----SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFN--E-VDYLSR 198 (280)
Q Consensus 127 -----~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ 198 (280)
+--..|..+.+++-+.-|...++-+|.+++. +.+|.+.+-|..+.+.+.+..+..... + .++...
T Consensus 167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~-------nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~ 239 (372)
T KOG3912|consen 167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS-------NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSC 239 (372)
T ss_pred CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc-------cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcC
Confidence 2224799999999999999999999988754 578888888888877554433222110 0 001110
Q ss_pred cCC--CcchH---------HHHHHHHHHHHHHHHHHHH---HHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccc
Q 023593 199 TPL--LRLPS---------FWLVMTLSGFLGLAISFTS---MWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLEN 264 (280)
Q Consensus 199 ~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~ 264 (280)
.+. +.|+. .-..+...|.. ..+++++ ....|..|+++-.+...++..+.=++++....|.+...|
T Consensus 240 ~~~g~~eD~~~~~~~~~e~p~l~val~~~~-vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llq 318 (372)
T KOG3912|consen 240 NPRGVLEDWGDAFAALQESPSLAVALIGFT-VSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQ 318 (372)
T ss_pred CCCcchhhHHHHHHHhcCCchhHHHHhhhh-hheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH
Confidence 010 01100 01233333333 3333333 356788999999999999999999999999999999999
Q ss_pred hhhhHHhhhhhccCCC
Q 023593 265 SASIFFGKLALLNGLD 280 (280)
Q Consensus 265 ~~G~~l~~~g~~~~~~ 280 (280)
+.|..+-+.|.+.|.|
T Consensus 319 ilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 319 ILGFLILIMGIILYNQ 334 (372)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999887754
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.34 E-value=1.9e-11 Score=92.65 Aligned_cols=116 Identities=21% Similarity=0.310 Sum_probs=95.3
Q ss_pred eeehhHHhcCCCChhHHHHHHHHHHHHHHHHHH-HHcCccccCcCcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhh
Q 023593 3 LVNKFVLSGYNFDAGISLMVYQNFISVVTVTIL-SFLGVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMV 80 (280)
Q Consensus 3 ~~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~ 80 (280)
..+|...+ +++ |....++|+..+.+ .... ...++.+.++.++++++.....+++ ......+.++++++++++..
T Consensus 8 ~~~k~~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 83 (126)
T PF00892_consen 8 VFSKKLLK--KIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV 83 (126)
T ss_pred HHHHHHhc--cCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence 35688777 577 89999999999986 3332 2222222345566777777877877 57899999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593 81 TVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG 122 (280)
Q Consensus 81 ~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~ 122 (280)
+.+.++.|+++.+++++++||+++++++.++++++.|+.+..
T Consensus 84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998764
No 35
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.23 E-value=1e-10 Score=87.56 Aligned_cols=105 Identities=20% Similarity=0.350 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHc-Cc-ccc-CcCcHHhhhHHHHHHHHHH-HHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHH
Q 023593 22 VYQNFISVVTVTILSFL-GV-IST-EPLTWRLIKVWLPVNVIFV-GMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMY 97 (280)
Q Consensus 22 ~~r~~~~~~~l~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~ 97 (280)
.+|..++.+++...... ++ .+. +..++|+++.+...|.+.. .++.+.++|+++.| +....+.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 46777777666553322 21 111 2222344555556577664 78999999999999 58889999999999999999
Q ss_pred HhCcccCHHHHHHHHHHHHHHHHHhcCccc
Q 023593 98 LFNKRHDNRVWAALFLMIISAISGGITDLS 127 (280)
Q Consensus 98 ~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~ 127 (280)
++|||++++++.++.++++|+.+...+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999887754
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.14 E-value=7.9e-10 Score=81.86 Aligned_cols=133 Identities=12% Similarity=0.135 Sum_probs=104.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHH
Q 023593 132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVM 211 (280)
Q Consensus 132 G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (280)
-.+|++++++.+++..++.|--++ +.||...+..-++.....+.......|+++...+ -++..|..+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~---------~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~----~~~k~~lfl 70 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLE---------GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE----IGPKSWLFL 70 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc---------ccCccHHHHHHHHHHHHHHHHHHHhcCceecccc----cCcceehhh
Confidence 357899999999999999998776 3566555666666666666666667777665322 123347888
Q ss_pred HHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
+++|+.+-..-+.-|.++|.-.+.+...+.-..++.+..++++++||++|..+++|+.++.+|.++
T Consensus 71 ilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail 136 (140)
T COG2510 71 ILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL 136 (140)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence 899966554444446789999999999999999999999999999999999999999999999764
No 37
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.13 E-value=2.6e-08 Score=84.62 Aligned_cols=209 Identities=15% Similarity=0.113 Sum_probs=155.8
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhh-hhHHHHHHHHHHHHhCcccCHHHHH----HHHHHHHHHHHHhc
Q 023593 49 RLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVGEMYLFNKRHDNRVWA----ALFLMIISAISGGI 123 (280)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~v~i~~~~~l~e~~~~~~~~----~~~l~~~Gv~l~~~ 123 (280)
+.+.--+..|+++...+..++.|.+++.+|...-+. ..+-+.+.+.+.++++|..+..++. +++++++|+.+.+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 567777777889999999999999999988877664 6777889999999999988777654 88899999998877
Q ss_pred Cccc--------cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhh
Q 023593 124 TDLS--------FHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDY 195 (280)
Q Consensus 124 ~~~~--------~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (280)
.|.+ ....|+...+++.+.|..|.+..|-. +.|+++..+-+++-.......+....++ .
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~-----------~~~~~~~~lPqaiGm~i~a~i~~~~~~~--~ 189 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF-----------HVSGWSAFLPQAIGMLIGAFIFNLFSKK--P 189 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----------CCChhHhHHHHHHHHHHHHHHHhhcccc--c
Confidence 6431 12469999999999999999997774 4688888877765544433333332211 1
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCccc----chhhhHHh
Q 023593 196 LSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLE----NSASIFFG 271 (280)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~----~~~G~~l~ 271 (280)
.. +...|.. +..|+.-..-|.+.+...++.+..+.=.++-+..+.+.+.|+++|||+=+.+ ..+|.+++
T Consensus 190 ~~------~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Li 262 (269)
T PF06800_consen 190 FF------EKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILI 262 (269)
T ss_pred cc------ccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHH
Confidence 11 1112333 3446655555666667788888888888899999999999999999987765 45688888
Q ss_pred hhhhcc
Q 023593 272 KLALLN 277 (280)
Q Consensus 272 ~~g~~~ 277 (280)
+.|+++
T Consensus 263 v~G~il 268 (269)
T PF06800_consen 263 VIGAIL 268 (269)
T ss_pred HHhhhc
Confidence 888875
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.10 E-value=7e-11 Score=93.92 Aligned_cols=211 Identities=15% Similarity=0.143 Sum_probs=151.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc--cc
Q 023593 51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITDL--SF 128 (280)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~--~~ 128 (280)
.++..|.+++..+.++....+++.++++.++.+.+|.--|+.+++++.+|+|+...++++.++++.|+.+.++.|. ..
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 4566777888888899999999999999999999999999999999999999999999999999999999887654 34
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhH----H-HHHHH-HHHHHHHHHHHHHhcchhhhhhcCCC
Q 023593 129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFS----M-VLLNN-SLSLPLGVLLVIVFNEVDYLSRTPLL 202 (280)
Q Consensus 129 ~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (280)
++.|+.+++.|+...|+|.+..|+..... ++.... - -+.+. ..+.|.+....--.|.++.....|
T Consensus 133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnA-------n~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~P-- 203 (290)
T KOG4314|consen 133 EIIGIACAVGSAFMAALYKVLFKMFIGNA-------NFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAP-- 203 (290)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccC-------cchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCC--
Confidence 58999999999999999999999987632 222111 1 11111 122222221111112333221111
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593 203 RLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL 275 (280)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~ 275 (280)
|.-+.-.+.+....++.....+..+.|...|+-.....+.......++=+-+.+-....|..+++.|=
T Consensus 204 -----WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F 271 (290)
T KOG4314|consen 204 -----WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF 271 (290)
T ss_pred -----chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 55555556666677776666777788888887666666666666776666677777778877777664
No 39
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.08 E-value=5.6e-10 Score=84.47 Aligned_cols=122 Identities=17% Similarity=0.287 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHH
Q 023593 141 FLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLA 220 (280)
Q Consensus 141 ~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (280)
+++|.+.++.|+..+ +.|+.....+....+.+ ..+.....++.+ . +. .+...+....+.+.++..
T Consensus 1 ~~~a~~~~~~k~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~--~~-~~~~~~~~~~~~~~~~~~ 65 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK---------KISPLSITFWRFLIAGI-LLILLLILGRKP--F--KN-LSPRQWLWLLFLGLLGTA 65 (126)
T ss_pred ceeeeHHHHHHHHhc---------cCCHHHHHHHHHHHHHH-HHHHHHhhcccc--c--cC-CChhhhhhhhHhhcccee
Confidence 357888899999876 37889999999988887 555555444322 1 11 122224455666777655
Q ss_pred HHHHH-HHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 221 ISFTS-MWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 221 ~~~~~-~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
.++.. +.+.++.++...+...+++|+.+.+++++++||+++..+++|+.+++.|..+
T Consensus 66 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l 123 (126)
T PF00892_consen 66 LAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVL 123 (126)
T ss_pred hHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 55554 5789999999999999999999999999999999999999999999999753
No 40
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.03 E-value=1.2e-09 Score=81.00 Aligned_cols=116 Identities=14% Similarity=0.119 Sum_probs=97.0
Q ss_pred eehhHHhcCCCChhHHHHHHHHHHHHHHHHHH-HHcCcccc-CcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhH
Q 023593 4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTIL-SFLGVIST-EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVT 81 (280)
Q Consensus 4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 81 (280)
..|..++ +.+ |.+-+..|..+..+.+... ...|+.+. ..++.|.|..+...|+....++.+.++|++.-++|...
T Consensus 21 F~KIGl~--~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~Vv 97 (140)
T COG2510 21 FAKIGLE--GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVV 97 (140)
T ss_pred HHHHhcc--ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEE
Confidence 3577777 677 8999999998887666553 33444332 23567778777777888889999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593 82 VLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG 122 (280)
Q Consensus 82 ~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~ 122 (280)
-+-.++|+++++++++++|||++..+|+++.++.+|+.+++
T Consensus 98 Pldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 98 PLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred EcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999998764
No 41
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.81 E-value=1.7e-07 Score=82.16 Aligned_cols=136 Identities=11% Similarity=0.115 Sum_probs=101.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHH
Q 023593 128 FHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSF 207 (280)
Q Consensus 128 ~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (280)
...+|..+.+++++.++...+..|.. . +.++.++.++....+.+.+.+.....++.+..... ..++..
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~---------~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~ 72 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y---------YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQK 72 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-c---------CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHH
Confidence 34589999999999999999999764 2 37899999999999888776655443332221110 011222
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 208 WLVMTLSGFLGLAISFT-SMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 208 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
+.... .+.++...++. .++..+++++...++..+..|++..++++++++|+++.++++|+++++.|..
T Consensus 73 ~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~ 141 (296)
T PRK15430 73 IFMLA-VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVL 141 (296)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 22222 34444444444 4578999999999999999999999999999999999999999999999975
No 42
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.80 E-value=1.7e-07 Score=80.35 Aligned_cols=136 Identities=17% Similarity=0.190 Sum_probs=101.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhh-hhcCCCcchHHHH
Q 023593 131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYL-SRTPLLRLPSFWL 209 (280)
Q Consensus 131 ~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 209 (280)
+|+.+.+++++.++...+..|.. . +.++.++.++-...+.+.+.+.....++.++. .+.+.......+.
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~---------~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K---------PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLIL 71 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c---------cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHH
Confidence 58999999999999999999974 3 37999999999998887766654444432211 0111111111233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 210 VMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
.....|++........+.+.+++++.+.+++.+..|+++.++++++++|+++.++++|..+++.|..
T Consensus 72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~ 138 (256)
T TIGR00688 72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVI 138 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 4455565544444445678999999999999999999999999999999999999999999999964
No 43
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.71 E-value=2.7e-07 Score=80.29 Aligned_cols=129 Identities=12% Similarity=0.090 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHH
Q 023593 133 YAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMT 212 (280)
Q Consensus 133 ~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (280)
+.+.+.+++++|.+++.+||..++ .++ ...+......+...|.......... ...+ +...+...+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~---------~~~--~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~---~~~~~~~~~ 67 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK---------EPD--FLWWALLAHSVLLTPYGLWYLAQVG-WSRL---PATFWLLLA 67 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc---------hhH--HHHHHHHHHHHHHHHHHHHhcccCC-CCCc---chhhHHHHH
Confidence 567889999999999999987552 122 3455555555566565443211001 1101 122244445
Q ss_pred HHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 213 LSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
..+.......+..+.+.++.++...+.+.+..|+++.+++++++||+++..+++|+.+++.|..
T Consensus 68 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ 131 (281)
T TIGR03340 68 ISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLL 131 (281)
T ss_pred HHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 5565555555556678999999999999999999999999999999999999999999999974
No 44
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.67 E-value=3.9e-07 Score=78.04 Aligned_cols=113 Identities=6% Similarity=0.001 Sum_probs=83.8
Q ss_pred eehhHHhcCCCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhHH
Q 023593 4 VNKFVLSGYNFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTV 82 (280)
Q Consensus 4 ~nK~~l~~~~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~ 82 (280)
.+|...++.+.+ +.....+|+.++.+++........ +.++.+++++...+..+++ ......+.++++++.+++..+.
T Consensus 146 ~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~ 223 (260)
T TIGR00950 146 LYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLG-PNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASI 223 (260)
T ss_pred HHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcC-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 456655532222 344555778888777665433221 2222345566666666665 4668888999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHH
Q 023593 83 LKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISA 118 (280)
Q Consensus 83 l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv 118 (280)
+.++.|++.++++++++||++++.++.+..+++.|+
T Consensus 224 ~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 224 LALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999986
No 45
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.66 E-value=4e-09 Score=87.21 Aligned_cols=245 Identities=10% Similarity=0.057 Sum_probs=169.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHcCccccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHH
Q 023593 13 NFDAGISLMVYQNFISVVTVTILSFLGVISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITA 92 (280)
Q Consensus 13 ~f~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~ 92 (280)
+.+.|..-++.....-.++.-.+...+. +. -...|++++.+++.-.-.+++-..|.||++....+.+-+-..+.+.
T Consensus 44 ~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~-~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~ 119 (336)
T KOG2766|consen 44 GINAPTSQTFLNYVLLALVYGPIMLFRR---KY-IKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVL 119 (336)
T ss_pred cCCCccHHHHHHHHHHHHHHhhHHHhhh---HH-HHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHH
Confidence 4566777777666655444433322221 11 1234778887777766666666789999999999999999999999
Q ss_pred HHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCcc--------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCC
Q 023593 93 VGEMYLFNKRHDNRVWAALFLMIISAISGGITDL--------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSG 164 (280)
Q Consensus 93 i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~ 164 (280)
+++|+++|.|.++.++.++++...|+.+...+|. +...+|..+.++++-+||..++..+.+.+
T Consensus 120 ~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk--------- 190 (336)
T KOG2766|consen 120 VLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK--------- 190 (336)
T ss_pred HHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh---------
Confidence 9999999999999999999999999998765542 22358999999999999999998888765
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhh
Q 023593 165 NLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSL 243 (280)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l 243 (280)
|.+..+.+-...+++.+...+-. ..+. .+.. ...+++.....+. ..++...-|+.. ..+|..|++...+--..
T Consensus 191 n~d~~elm~~lgLfGaIIsaIQ~-i~~~-~~~~--tl~w~~~i~~yl~--f~L~MFllYsl~pil~k~~~aT~~nlslLT 264 (336)
T KOG2766|consen 191 NADRVELMGFLGLFGAIISAIQF-IFER-HHVS--TLHWDSAIFLYLR--FALTMFLLYSLAPILIKTNSATMFNLSLLT 264 (336)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHH-hhhc-ccee--eEeehHHHHHHHH--HHHHHHHHHHhhHHheecCCceEEEhhHhH
Confidence 46777766666666665554432 2221 1111 1112222212111 222233334333 56788888888877777
Q ss_pred hhHHHHHHHHHhccccCcccchhhhHHhhhhhccC
Q 023593 244 NKIPLSVAGILLFKVPTSLENSASIFFGKLALLNG 278 (280)
Q Consensus 244 ~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~ 278 (280)
...+++++ -.||-+.+|.-.+..+.+..|-+.+
T Consensus 265 sDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiY 297 (336)
T KOG2766|consen 265 SDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIY 297 (336)
T ss_pred HHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEe
Confidence 78888887 6789889999999999999887654
No 46
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.58 E-value=2.8e-06 Score=63.15 Aligned_cols=63 Identities=13% Similarity=0.228 Sum_probs=58.9
Q ss_pred HHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593 60 IFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG 122 (280)
Q Consensus 60 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~ 122 (280)
++....++...++++.|.+.+..+.++.++++++.+++++|||+++++++++.++++|+.++.
T Consensus 46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 356688888999999999999999999999999999999999999999999999999998764
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.46 E-value=6e-06 Score=74.13 Aligned_cols=134 Identities=17% Similarity=0.136 Sum_probs=102.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHH
Q 023593 131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV 210 (280)
Q Consensus 131 ~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (280)
+-+..++..-++++.+.++.|..++. ..++....+|=..++.+++.++....++.... + ..+...|..
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~--------G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~---~-~~~~~~~~~ 80 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSK--------GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL---P-PLSVSILSK 80 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHC--------CCCccHHHHHHHHHHHHHHHHHHHHHHHhccc---C-cchHHHHHH
Confidence 45677888889999999999999863 57888888888888888777766543221110 1 011222455
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHh------ccccCcccchhhhHHhhhhhc
Q 023593 211 MTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILL------FKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~------f~e~~~~~~~~G~~l~~~g~~ 276 (280)
+...|+++...+...+..+++++|...+++.+..|+++.++++++ ++|+++..+++|+++++.|..
T Consensus 81 l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ 152 (358)
T PLN00411 81 IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGAL 152 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHH
Confidence 566777774333345678999999999999999999999999999 699999999999999998864
No 48
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.30 E-value=1.9e-05 Score=69.08 Aligned_cols=109 Identities=16% Similarity=0.090 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCccccC-cCcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHH
Q 023593 17 GISLMVYQNFISVVTVTILSFLGVISTE-PLTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVG 94 (280)
Q Consensus 17 p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~ 94 (280)
+...+.+|+.++.+.............. ..+.+++..+...+++ ......+.++++++.+++....+..+.|++.+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~ 256 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLL 256 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 4456678888777665543322111111 1244566666666665 4567788999999999999999999999999999
Q ss_pred HHHHhCcccCHHHHHHHHHHHHHHHHHhcCc
Q 023593 95 EMYLFNKRHDNRVWAALFLMIISAISGGITD 125 (280)
Q Consensus 95 ~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 125 (280)
+++++||++++.++.+.++++.|+.+....+
T Consensus 257 ~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 257 GTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998875543
No 49
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.27 E-value=2e-05 Score=67.11 Aligned_cols=135 Identities=17% Similarity=0.235 Sum_probs=109.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHH
Q 023593 129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFW 208 (280)
Q Consensus 129 ~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (280)
+..|++.++.+-+.++.--.+.|-+. +.++.++..+-.+-+.|..........++++..+ ..++|..+
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~----------~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~ 72 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLE----------PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTL 72 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHc----------cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHH
Confidence 34799999999999999888888863 3688899888888888888877777777766554 23355556
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 209 LVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
..+..++.+ ...|...| ++.++-.....|.=.+++|.+.+++|.++|+|+++..|++.+.+..+|..
T Consensus 73 ~~~~l~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~ 140 (293)
T COG2962 73 LMLALTALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVL 140 (293)
T ss_pred HHHHHHHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 666665555 55677776 67888899999999999999999999999999999999999999888853
No 50
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.23 E-value=2.4e-05 Score=68.41 Aligned_cols=77 Identities=17% Similarity=0.285 Sum_probs=65.1
Q ss_pred cHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593 47 TWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI 123 (280)
Q Consensus 47 ~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 123 (280)
+++.+...+..+++ ..+.+.+.++++++.+++.++...++.|++..++++++++|++++.++++..+++.|++....
T Consensus 204 ~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 204 HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 33444444455655 456778889999999999999999999999999999999999999999999999999987743
No 51
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.20 E-value=1.2e-05 Score=70.47 Aligned_cols=70 Identities=16% Similarity=0.179 Sum_probs=61.6
Q ss_pred HHHHHHHH-HHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593 53 VWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG 122 (280)
Q Consensus 53 ~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~ 122 (280)
+....|+. +.....+++.|+.+.|.+..+-+.+..-++.++++..++|||++++++.+..+++.|..++.
T Consensus 51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 34444554 46677889999999999999999999999999999999999999999999999999998753
No 52
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.19 E-value=6.7e-05 Score=67.35 Aligned_cols=136 Identities=13% Similarity=0.045 Sum_probs=98.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCC-hhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHH
Q 023593 129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLN-EFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSF 207 (280)
Q Consensus 129 ~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (280)
++.-..+.+..-.+...++++.|+.++. .+ |+.+...+...+.....++.. .+ .....+.+. ....
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~---------~~~P~~l~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~--~~~~ 113 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM---------LPLPWTISSLQLFVGWLFALLYWA-TG-FRKIPRIKS--LKLF 113 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh---------CChhHHHHHHHHHHHHHHHHHHHH-hC-CCCCCCCCC--HHHH
Confidence 4444555555666667778888988773 56 899999998888765544322 11 111001110 1123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 208 WLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
+..++..|+++...+...+.+.+++++...+++-..+|++++++++++++|+++.++++|+.++++|..+
T Consensus 114 ~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l 183 (350)
T PTZ00343 114 LKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVAL 183 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHh
Confidence 5556667887777666667889999999999999999999999999999999999999999999999865
No 53
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.18 E-value=2.2e-05 Score=68.80 Aligned_cols=77 Identities=10% Similarity=0.044 Sum_probs=67.5
Q ss_pred CcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593 46 LTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG 122 (280)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~ 122 (280)
.+++.+...+..++.......+.++++|+.+++..+...+..|++..++++++++|++++.++++.++++.|+.+..
T Consensus 210 ~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 210 FSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 45556666666665566688899999999999999999999999999999999999999999999999999997764
No 54
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.18 E-value=2.2e-05 Score=58.57 Aligned_cols=95 Identities=20% Similarity=0.317 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhc
Q 023593 178 LSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLF 256 (280)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f 256 (280)
.+.+.........++..+.......++ +...+..|..+...++..+ .+.++.++ ..+.+..+.|+++.++|+++|
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~ 82 (113)
T PF13536_consen 7 FSVLFLLIILLIRGRLRDLFRALRRKP---WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF 82 (113)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence 444555554444445443322111112 2223444666554555554 67888885 788999999999999999999
Q ss_pred cccCcccchhhhHHhhhhhc
Q 023593 257 KVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 257 ~e~~~~~~~~G~~l~~~g~~ 276 (280)
+|+++..++.|+.+++.|.+
T Consensus 83 ~er~~~~~~~a~~l~~~Gv~ 102 (113)
T PF13536_consen 83 KERLSPRRWLAILLILIGVI 102 (113)
T ss_pred cCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999974
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.11 E-value=0.00012 Score=64.35 Aligned_cols=126 Identities=7% Similarity=-0.046 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHH
Q 023593 138 INCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFL 217 (280)
Q Consensus 138 ~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (280)
+.-.+...+++++|+.+++ -..|..+...+...+.....+.. ..+..+. +. .+...+..++..|++
T Consensus 9 ~w~~~~~~~~~~NK~~l~~--------~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~-~~~~~~~~~~~~g~~ 74 (302)
T TIGR00817 9 LWYFLNVYFNIYNKKLLNV--------FPYPYFKTLISLAVGSLYCLLSW-SSGLPKR----LK-ISSALLKLLLPVAIV 74 (302)
T ss_pred HHHHHHHHHHHHHHHHHhh--------CChhHHHHHHHHHHHHHHHHHHH-HhCCCCC----CC-CCHHHHHHHHHHHHH
Confidence 3344445566777887762 13577778888777665544331 1111111 11 111224455556766
Q ss_pred HHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 218 GLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 218 ~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
........+..++++++...+++....|+++.++++++++|+++.++++|..+++.|..+
T Consensus 75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l 134 (302)
T TIGR00817 75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVAL 134 (302)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhh
Confidence 544444556889999999999999999999999999999999999999999999999754
No 56
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.08 E-value=6.8e-05 Score=58.77 Aligned_cols=117 Identities=15% Similarity=0.197 Sum_probs=86.3
Q ss_pred ehhHHhc-----CCCChhHHHHHHHHHHHHHHHHHHHH-cCcccc----CcC-------cHHhhhHHHHHHHHHHHHHHH
Q 023593 5 NKFVLSG-----YNFDAGISLMVYQNFISVVTVTILSF-LGVIST----EPL-------TWRLIKVWLPVNVIFVGMLIT 67 (280)
Q Consensus 5 nK~~l~~-----~~f~~p~~l~~~r~~~~~~~l~~~~~-~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~ 67 (280)
.|..+++ .+.+ |..+.......+.+.+.+... .+..+. .+. +.+.+..+...+++....+..
T Consensus 19 ~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 97 (153)
T PF03151_consen 19 IKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYNLS 97 (153)
T ss_pred HHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 4555665 4666 677777777777666655322 221111 011 112344455556677889999
Q ss_pred hhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593 68 SMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG 122 (280)
Q Consensus 68 ~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~ 122 (280)
.+..++++++-+++++.+...+.+.+.+.+++||++++.++.|+.+.+.|+.+..
T Consensus 98 ~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 98 SFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999999999999999999997653
No 57
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.04 E-value=0.0023 Score=56.86 Aligned_cols=229 Identities=10% Similarity=0.053 Sum_probs=129.3
Q ss_pred CcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCccc---C----HHHHHHHHHHHHH
Q 023593 46 LTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRH---D----NRVWAALFLMIIS 117 (280)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~---~----~~~~~~~~l~~~G 117 (280)
.+.+.+..-+..|++....+.....+.+++.+|...-+ .-++-+...++..++++|-. + .....++++.++|
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG 147 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG 147 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 45566666777788889999999999999998887755 56777888889888888754 2 3357888999999
Q ss_pred HHHHhc----Ccc--------ccc-hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHH---HHHH
Q 023593 118 AISGGI----TDL--------SFH-AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNS---LSLP 181 (280)
Q Consensus 118 v~l~~~----~~~--------~~~-~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 181 (280)
+++.+. .|. +.+ .+|+++++++.+.++.|+.....-..-.+. ..+...++....+-+.. .+..
T Consensus 148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~-a~~~g~~~~~~~lp~~~~~~~G~~ 226 (345)
T PRK13499 148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEA-AAALGVDPLYAALPSYVVIMGGGA 226 (345)
T ss_pred HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhh-hhhcCCCchHHHHHHHHHHHHHHH
Confidence 998876 332 122 489999999999999999544332211000 00123344433333322 1111
Q ss_pred HHH-HHHHH---h-cchhhhhhcCCCcc--hHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhH---Hh-hhhhHHHHH
Q 023593 182 LGV-LLVIV---F-NEVDYLSRTPLLRL--PSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSL---VG-SLNKIPLSV 250 (280)
Q Consensus 182 ~~~-~~~~~---~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~---~~-~l~~v~~~~ 250 (280)
..- .+... . +++....+....+. ..-...-++.|+.-...+++......+.+.....+ +. ...-+++.+
T Consensus 227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl 306 (345)
T PRK13499 227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL 306 (345)
T ss_pred HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence 111 11110 1 11111111111000 01122224444443333333334444553332222 22 444578888
Q ss_pred HHHHhccccCc------ccchhhhHHhhhhhc
Q 023593 251 AGILLFKVPTS------LENSASIFFGKLALL 276 (280)
Q Consensus 251 ~~~~~f~e~~~------~~~~~G~~l~~~g~~ 276 (280)
.|+ +++|.=+ ...++|.++.+.|.+
T Consensus 307 wGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~ 337 (345)
T PRK13499 307 WGL-VLKEWKGASRRPVRVLSLGCVVIILAAN 337 (345)
T ss_pred hhh-hhhhccCCCccchhHHHHHHHHHHHHHH
Confidence 888 4888644 566888888888764
No 58
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.99 E-value=0.00013 Score=63.91 Aligned_cols=79 Identities=10% Similarity=0.001 Sum_probs=67.9
Q ss_pred CcHHhhhHHHHHHHH-HHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593 46 LTWRLIKVWLPVNVI-FVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT 124 (280)
Q Consensus 46 ~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~ 124 (280)
.+.+.+..++..+++ ......+.++++++.+++....+..+.|++..+.++++++|++++.++++.+++++|+.+...+
T Consensus 209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 355666666666655 3567888899999999999999999999999999999999999999999999999999876543
No 59
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.98 E-value=0.00021 Score=54.48 Aligned_cols=114 Identities=22% Similarity=0.214 Sum_probs=80.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHH
Q 023593 131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV 210 (280)
Q Consensus 131 ~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (280)
.|+.+.+.+.++.+...++.|+-+++.+ ..+... . .. . .. . ... +| ..
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g------~~~~~~---~-~~---~-~~-~-~~~-------------~p---~~ 49 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP------LLSHAW---D-FI---A-AL-L-AFG-------------LA---LR 49 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC------Cccchh---H-HH---H-HH-H-HHh-------------cc---HH
Confidence 4889999999999999999999876432 111100 0 00 0 00 0 000 11 11
Q ss_pred HHHHHHHHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHH--hccccCcccchhhhHHhhhhhc
Q 023593 211 MTLSGFLGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGIL--LFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 211 ~~~~~~~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~--~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
.++.|+.+++.++..| .++|+.+..+...+..+.++...+.++. +|||++|+.+++|+++++.|.+
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~ 118 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVW 118 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 2456777788888776 5799999999988888888778777775 8999999999999999999964
No 60
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.97 E-value=7.6e-05 Score=56.95 Aligned_cols=71 Identities=8% Similarity=0.158 Sum_probs=61.6
Q ss_pred HHHHH-HHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHH--HhCcccCHHHHHHHHHHHHHHHHHhcCc
Q 023593 55 LPVNV-IFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMY--LFNKRHDNRVWAALFLMIISAISGGITD 125 (280)
Q Consensus 55 ~~~~~-~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~--~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 125 (280)
+..++ ++.+..++.++++++.|.+.+.-+.+..+..+.+.++. ++||+++++++++++++++|+.++..++
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 34454 46778999999999999999999999999889888885 7999999999999999999999886543
No 61
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.83 E-value=8.4e-06 Score=67.51 Aligned_cols=213 Identities=15% Similarity=0.144 Sum_probs=146.0
Q ss_pred CcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHH----HHHHHHHHHH
Q 023593 44 EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVW----AALFLMIISA 118 (280)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~----~~~~l~~~Gv 118 (280)
+..+.+.+---+..|.+....+..++.|.+++.+|.+.-+ ..++-+-+.+++.+.+||..+..+. .++++.+.|+
T Consensus 52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~ 131 (288)
T COG4975 52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI 131 (288)
T ss_pred CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence 3345555555555567778888999999999999887755 4567788889999999999888774 5778888888
Q ss_pred HHHhcCcc--------ccchhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHh
Q 023593 119 ISGGITDL--------SFHAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVF 190 (280)
Q Consensus 119 ~l~~~~~~--------~~~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (280)
.+.+..|. +.--+|+...+.|.+.|-.|.+..|.. +.+.++..+-|.+-.....+.+....
T Consensus 132 ~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f-----------~v~g~saiLPqAiGMv~~ali~~~~~ 200 (288)
T COG4975 132 YLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF-----------DVDGLSAILPQAIGMVIGALILGFFK 200 (288)
T ss_pred eEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc-----------cccchhhhhHHHHHHHHHHHHHhhcc
Confidence 88877653 111378888889999999999987775 35667666666655444444333333
Q ss_pred cchhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccch----h
Q 023593 191 NEVDYLSRTPLLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENS----A 266 (280)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~----~ 266 (280)
+|.. .+-..|.. +..|+.-...|.+.+.+.++.+-.+.=.++-+.-+.+++-|+++++|+=|..++ +
T Consensus 201 ~~~~--------~~K~t~~n-ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~i 271 (288)
T COG4975 201 MEKR--------FNKYTWLN-IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVII 271 (288)
T ss_pred cccc--------hHHHHHHH-HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhh
Confidence 2211 12223444 344666555677666666666655554556666788889999999998886664 5
Q ss_pred hhHHhhhhhc
Q 023593 267 SIFFGKLALL 276 (280)
Q Consensus 267 G~~l~~~g~~ 276 (280)
|+++++.|.+
T Consensus 272 Giilivvgai 281 (288)
T COG4975 272 GIILIVVGAI 281 (288)
T ss_pred hHHHHHHHhh
Confidence 7777777764
No 62
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.77 E-value=0.00024 Score=53.33 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593 53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT 124 (280)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~ 124 (280)
......+++..+.++...+++++|.+.+..+ ....-+.+++.+.+++||++++.+++++.++++|+..+...
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 3445566778889999999999999988877 46889999999999999999999999999999999887543
No 63
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.65 E-value=0.0005 Score=50.00 Aligned_cols=73 Identities=16% Similarity=0.082 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593 51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI 123 (280)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 123 (280)
.+.....-+++..+..+...|+|++|.+.+..+ ...-.+.+++.+++++||+.++.++.++.+.++|+.....
T Consensus 30 ~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 30 LWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 344444456677788888899999999887655 6677889999999999999999999999999999987643
No 64
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.64 E-value=0.00061 Score=50.41 Aligned_cols=72 Identities=13% Similarity=0.136 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhhhHHhh-hhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593 53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT 124 (280)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~ 124 (280)
.....-+++....++...+++++|.+.+..+- ...-+.+.+.+++++||++++.++.++.++++|+..+...
T Consensus 32 ~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 32 PSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 33344556777888888999999999988884 4788899999999999999999999999999999987543
No 65
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.61 E-value=0.00028 Score=52.42 Aligned_cols=60 Identities=17% Similarity=0.143 Sum_probs=49.8
Q ss_pred HHHHHHHHHH-HHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 217 LGLAISFTSM-WFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 217 ~~~~~~~~~~-~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
.++...+..+ ...|+.+.......-.+.++.+.+.|+++|||++|..+++|+.+++.|.+
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~ 105 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIV 105 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 3344444443 57888998888888889999999999999999999999999999999964
No 66
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.59 E-value=0.00072 Score=49.84 Aligned_cols=71 Identities=14% Similarity=0.159 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHH
Q 023593 51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISG 121 (280)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 121 (280)
+.......+++..+.++-..++|++|.+.+..+ ....-+.+.+.+.+++||++++.++.++.+++.|+...
T Consensus 35 ~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 35 KIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 344444455677788888899999999987766 45778899999999999999999999999999999875
No 67
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.58 E-value=0.0008 Score=49.30 Aligned_cols=72 Identities=11% Similarity=0.120 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHh
Q 023593 51 IKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGG 122 (280)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~ 122 (280)
+......-+++....++-..++|++|.+.+..+ .....+.+.+.+.+++||++++.++.++.+++.|+....
T Consensus 29 ~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 29 LTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 344444456677888888899999999887766 448889999999999999999999999999999998763
No 68
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.56 E-value=0.00067 Score=59.29 Aligned_cols=75 Identities=19% Similarity=0.236 Sum_probs=65.9
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhhhhc-ccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHH----HHHHHHHHHHHHHh
Q 023593 48 WRLIKVWLPVNVIFVGMLITSMFSLK-YINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVW----AALFLMIISAISGG 122 (280)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~----~~~~l~~~Gv~l~~ 122 (280)
.+..+..+..|++......+.+.+++ +.+++.+.++.+..|+...+++.+++||+.+++++ ++.++++.|+.+..
T Consensus 208 ~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 208 KYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 34455566678887778888889999 99999999999999999999999999999999999 99999999998764
No 69
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.56 E-value=0.0024 Score=55.01 Aligned_cols=79 Identities=13% Similarity=0.185 Sum_probs=69.3
Q ss_pred CcHHhhhHHHHHHHHHH-HHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593 46 LTWRLIKVWLPVNVIFV-GMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT 124 (280)
Q Consensus 46 ~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~ 124 (280)
.+.+++......+++.. ..+.+.+++++..+++..+....+.|++..+.++++++|++++.++.+.++++.|+.+....
T Consensus 209 ~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 209 ILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 35566777777777765 58889999999999999999999999999999999999999999999999999999887543
No 70
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.47 E-value=0.0028 Score=56.19 Aligned_cols=65 Identities=11% Similarity=0.116 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
++.+++=..-||....+.++|+-+..+++.....++++++++++++++.++.+++|+.+++.|..
T Consensus 83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~ 147 (334)
T PF06027_consen 83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVV 147 (334)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Confidence 34477878889988899999999999999999999999999999999999999999999999854
No 71
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.12 E-value=0.011 Score=51.86 Aligned_cols=122 Identities=17% Similarity=0.217 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHHHHHHHHHHHH
Q 023593 143 TASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMTLSGFLGLAIS 222 (280)
Q Consensus 143 ~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (280)
+..+.++++++.++.. .+-.+.-+++.|.........+....... . +....+ +.-....+++-..-.
T Consensus 12 ~~~~g~~qE~i~~~~~-----~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-----~-~~~~~~--~~~~~~~~~~~~~~~ 78 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPY-----GSPFPLFLTFVQFAFNALFSFILLSLFKF-----P-KSRKIP--LKKYAILSFLFFLAS 78 (303)
T ss_pred HHHHHHHHHHHHcCCC-----CCcccHHHHHHHHHHHHHHHHHHHHhccc-----c-CCCcCh--HHHHHHHHHHHHHHH
Confidence 3346678888876432 11146677777777666655544433330 0 111111 222233345545555
Q ss_pred HHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 223 FTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 223 ~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
...+.+.++.+..+..+.-..+++.+++++.++++++.+..++.++.++.+|..+
T Consensus 79 ~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~ 133 (303)
T PF08449_consen 79 VLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAI 133 (303)
T ss_pred HHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHhe
Confidence 6667889999999999999999999999999999999999999999999999754
No 72
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.12 E-value=0.026 Score=43.54 Aligned_cols=130 Identities=14% Similarity=0.215 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHHH
Q 023593 133 YAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVMT 212 (280)
Q Consensus 133 ~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (280)
..+++.+....+....++.|+-++. -|++.-.+.+...+...........++. +..+ ..+.+.|..
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~--------gs~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~---~~~~p~w~~-- 68 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKAL--------GSPLVASFISFGVGFILLLIILLITGRP-SLAS---LSSVPWWAY-- 68 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--------CccHHHHHHHHHHHHHHHHHHHHHhccc-ccch---hccCChHHh--
Confidence 4667888888888888888886542 2588888888888888777776666554 2211 122222432
Q ss_pred HHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHH-HHHH-hcc---ccCcccchhhhHHhhhhhc
Q 023593 213 LSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSV-AGIL-LFK---VPTSLENSASIFFGKLALL 276 (280)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~-~~~~-~f~---e~~~~~~~~G~~l~~~g~~ 276 (280)
..|+++...-......+++.++.........-.+.... ++.. +|| +++++...+|+.+.+.|.+
T Consensus 69 lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 69 LGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 27888888888777888999998888877766555444 4433 343 6899999999999999864
No 73
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.06 E-value=0.0025 Score=45.75 Aligned_cols=62 Identities=11% Similarity=0.122 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHH
Q 023593 53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLM 114 (280)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~ 114 (280)
.......++....++...++|++|.+.+..+ .....+.+.+.+.+++||+.++.++.++.++
T Consensus 31 ~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 31 PTILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp ---HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3333344678888899999999999988655 5699999999999999999999999998763
No 74
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.05 E-value=0.0071 Score=50.73 Aligned_cols=67 Identities=15% Similarity=0.189 Sum_probs=56.7
Q ss_pred HHHHHHHH-HHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593 54 WLPVNVIF-VGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120 (280)
Q Consensus 54 ~~~~~~~~-~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l 120 (280)
-+..+++. .+-..+...++++.|.+.+.++.++.|.+-++.++++++|++++.||+++..++.+++-
T Consensus 212 aLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 212 ALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred HHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 33334443 33566778899999999999999999999999999999999999999999998887753
No 75
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.82 E-value=0.0043 Score=45.88 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=46.9
Q ss_pred HHHHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 217 LGLAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 217 ~~~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
.++..++..+ .+.|+.+ ..-+++..-+.-+.+.+.|+++|||++|+.+++|+.+++.|.+
T Consensus 38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi 99 (110)
T PRK09541 38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVL 99 (110)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 3444444433 4677776 4456777778889999999999999999999999999999964
No 76
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.80 E-value=0.011 Score=51.24 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=59.4
Q ss_pred HHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcC
Q 023593 60 IFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGIT 124 (280)
Q Consensus 60 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~ 124 (280)
.+...-..++.|..+.|.+..+-+.+++.+..++++..++|||.++...+++.+.++|..++..+
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 35668888899999999999999999999999999999999999999999999999999876544
No 77
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.64 E-value=0.013 Score=51.51 Aligned_cols=114 Identities=16% Similarity=0.141 Sum_probs=79.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHH
Q 023593 130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWL 209 (280)
Q Consensus 130 ~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (280)
..|..+++.++++.+...+++||-..+.+. ...+.-+ +.. +...++.+|.
T Consensus 6 ~iGv~lav~ss~~~~~g~~lqk~~~~r~~~----~~~~~~~---------------------~~~-----~~l~~~~W~~ 55 (300)
T PF05653_consen 6 YIGVLLAVVSSIFIAVGFNLQKKSHLRLPR----GSLRAGS---------------------GGR-----SYLRRPLWWI 55 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----ccccccc---------------------hhh-----HHHhhHHHHH
Confidence 479999999999999999999997664331 0010000 000 0011233344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 210 VMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
-++..+ .+-.. .+.+....++...+.++.+.-++..+++..++||+++..++.|..+++.|+.+
T Consensus 56 G~~~~~-~g~~~---~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l 119 (300)
T PF05653_consen 56 GLLLMV-LGEIL---NFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL 119 (300)
T ss_pred HHHHHh-cchHH---HHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence 333322 33333 34567778888899999999999999999999999999999999999999753
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.62 E-value=0.008 Score=43.78 Aligned_cols=58 Identities=17% Similarity=0.269 Sum_probs=47.6
Q ss_pred HHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 219 LAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 219 ~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
...++... .++|+.+ ..-+++++-+-.+.+.+.|+++|||+.+..+++|+.+++.|.+
T Consensus 40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi 99 (106)
T COG2076 40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVI 99 (106)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHH
Confidence 44444433 4678776 5567888999999999999999999999999999999999864
No 79
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.53 E-value=0.0095 Score=44.73 Aligned_cols=60 Identities=15% Similarity=0.280 Sum_probs=45.9
Q ss_pred HHHHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 217 LGLAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 217 ~~~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
..+..++..+ .+.|+.+ ..-++++.-+.-+.+.+.|+++|||++|+.+++|+.+++.|.+
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi 99 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIV 99 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 3344444433 4677766 4455666777889999999999999999999999999999964
No 80
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.48 E-value=0.011 Score=43.48 Aligned_cols=58 Identities=14% Similarity=0.230 Sum_probs=46.7
Q ss_pred HHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 219 LAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 219 ~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
...++... .+.|+.+ ..-+++++-+.-+.+.+.|+++|||++|+.+++|+.+++.|.+
T Consensus 45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi 104 (109)
T PRK10650 45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMV 104 (109)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 33444333 5677776 5567888888899999999999999999999999999999864
No 81
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.48 E-value=0.012 Score=43.20 Aligned_cols=50 Identities=16% Similarity=0.323 Sum_probs=44.1
Q ss_pred HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 227 WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 227 ~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
.+.|+.+ ..-++++.-+..+.+.+.|+++|||++|+.+++|+.+++.|.+
T Consensus 48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv 98 (105)
T PRK11431 48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGII 98 (105)
T ss_pred HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 4677776 5667888889999999999999999999999999999999864
No 82
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.43 E-value=0.009 Score=44.20 Aligned_cols=60 Identities=13% Similarity=0.176 Sum_probs=51.0
Q ss_pred HHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593 61 FVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120 (280)
Q Consensus 61 ~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l 120 (280)
+-.....+++.++..|.|.+.-+ .+++=++|++.++++.+|..+++++.++.+++.|+.+
T Consensus 51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34455556788999999998877 5899999999999888888899999999999999865
No 83
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.38 E-value=0.013 Score=49.85 Aligned_cols=68 Identities=12% Similarity=0.106 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 210 VMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
.+..=+++-..-|...+..+++.+|.+..+....|.+++.++++++++++.+.+||.++.+.+.|..+
T Consensus 19 ~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~l 86 (244)
T PF04142_consen 19 KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVL 86 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHhe
Confidence 33444555566677778899999999999999999999999999999999999999999999888753
No 84
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.86 E-value=0.092 Score=45.06 Aligned_cols=69 Identities=19% Similarity=0.287 Sum_probs=56.2
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHH----HHHHHHHHH
Q 023593 49 RLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWA----ALFLMIISA 118 (280)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~----~~~l~~~Gv 118 (280)
+.++. +.-|+++...+.+...|.+....+.+-.+.++.++...+.+.+++||+=++|++. +++++++|.
T Consensus 194 ~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~ 266 (269)
T PF06800_consen 194 KSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA 266 (269)
T ss_pred chHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence 34544 4449999999999999999999999999999999999999999999998888654 444444444
No 85
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.82 E-value=0.03 Score=40.09 Aligned_cols=54 Identities=20% Similarity=0.312 Sum_probs=29.0
Q ss_pred HHHHHHHHH-HHHhhcChhh-HhHHhhhhhHHHHHHHHHhccccCcccchhhhHHh
Q 023593 218 GLAISFTSM-WFLHQTGATT-YSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFG 271 (280)
Q Consensus 218 ~~~~~~~~~-~~~~~~s~~~-~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~ 271 (280)
+++.++..+ .+.|+.+... +.+..-+..+.+.+.|+.+|||++|..++.|+.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 344444333 5677776444 46777788899999999999999999999999874
No 86
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.61 E-value=0.0079 Score=50.88 Aligned_cols=66 Identities=12% Similarity=0.128 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 212 TLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
++=|+.|+..-+..|++.++.+-..++++....|+++.+++|++++|+.|..+.+|..+.+.|.++
T Consensus 101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVL 166 (346)
T KOG4510|consen 101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVL 166 (346)
T ss_pred EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEE
Confidence 334566665556667888888888899999999999999999999999999999999999999754
No 87
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.38 E-value=0.18 Score=45.01 Aligned_cols=131 Identities=12% Similarity=0.066 Sum_probs=77.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHH-----HHHHHHHHHHHHHHhcchhhhhhcCCCcc
Q 023593 130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLN-----NSLSLPLGVLLVIVFNEVDYLSRTPLLRL 204 (280)
Q Consensus 130 ~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (280)
..|++++++++++++-..+-+||. + ..+||.. +- ..+..|...... ..++..+..+ ..+
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~-k----------~w~wE~~-W~v~gi~~wl~~~~~~g~~-~~~~f~~~~~---~~~ 69 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV-K----------KWSWETM-WSVGGIFSWLILPWLIAAL-LLPDFWAYYS---SFS 69 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc-C----------CCchhHH-HHHHHHHHHHHHHHHHHHH-HhhhHHHHHH---hcC
Confidence 379999999999999988888883 2 2344432 21 111112111111 1111111111 123
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcCh-hhHhHHhhhhhHHHHHHHHHhccccC---c----ccchhhhHHhhhhhc
Q 023593 205 PSFWLVMTLSGFLGLAISFTSMWFLHQTGA-TTYSLVGSLNKIPLSVAGILLFKVPT---S----LENSASIFFGKLALL 276 (280)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~s~~~~l~~v~~~~~~~~~f~e~~---~----~~~~~G~~l~~~g~~ 276 (280)
+..+..-.++|++-...+...+...|+.+- ....+..-++-+..++++.+++||=. + ....+|++++++|..
T Consensus 70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 444555566777766667777778888774 44445555667889999999998532 2 346677777777764
No 88
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.21 E-value=0.36 Score=37.20 Aligned_cols=103 Identities=14% Similarity=0.100 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCcc-ccCcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhh-hhHHHHHHHH
Q 023593 17 GISLMVYQNFISVVTVTILSFLGVI-STEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLK-NVTNVITAVG 94 (280)
Q Consensus 17 p~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~v~i~ 94 (280)
|..-++..+..+.+.+.+.....+. +.++.+..+|+.++ -|++-.....+..++...+.++..+.+. .-+-+.-.+.
T Consensus 30 ~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~i 108 (138)
T PF04657_consen 30 PLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLI 108 (138)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 6777778888887776654433222 33332222354444 4777788888889999999988877664 4455556666
Q ss_pred HHH----HhCcccCHHHHHHHHHHHHHHHH
Q 023593 95 EMY----LFNKRHDNRVWAALFLMIISAIS 120 (280)
Q Consensus 95 ~~~----~l~e~~~~~~~~~~~l~~~Gv~l 120 (280)
+.+ ..|++++++|.+++.++.+|+.+
T Consensus 109 D~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 109 DHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 664 35678999999999999999863
No 89
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=94.75 E-value=0.79 Score=40.59 Aligned_cols=113 Identities=12% Similarity=0.109 Sum_probs=73.5
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHhcch--hhhh-hcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhH
Q 023593 163 SGNLNEFSMVLLNNSLSLPLGVLLVIVFNEV--DYLS-RTP--LLRLPSFWLVMTLSGFLGLAISFTSMWFLHQTGATTY 237 (280)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 237 (280)
+.++.+....+..=+.-.++........... +... +.. -+.++.-...+..=+..-..-|...+....+.+|.++
T Consensus 42 ~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaaty 121 (345)
T KOG2234|consen 42 KPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATY 121 (345)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhh
Confidence 3456777766666665555555444332111 1111 111 1222311233333344444455555678999999999
Q ss_pred hHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593 238 SLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL 275 (280)
Q Consensus 238 s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~ 275 (280)
++...+|...+.++.+++++++.+.+||....+-+.|.
T Consensus 122 qVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv 159 (345)
T KOG2234|consen 122 QVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGV 159 (345)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888875
No 90
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=94.15 E-value=0.065 Score=47.16 Aligned_cols=111 Identities=12% Similarity=0.116 Sum_probs=82.2
Q ss_pred cCCCChhHHHHHHHHHHHHHHHH-HHHHc--Cccc---c-CcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh
Q 023593 11 GYNFDAGISLMVYQNFISVVTVT-ILSFL--GVIS---T-EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL 83 (280)
Q Consensus 11 ~~~f~~p~~l~~~r~~~~~~~l~-~~~~~--~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l 83 (280)
++..+ +.-+...+.-++.+.+. ..... +... . .+.+.+ .......+++....+...+..++++++-++++.
T Consensus 190 ~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~ 267 (316)
T KOG1441|consen 190 GESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVA 267 (316)
T ss_pred ccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhh
Confidence 34566 67777777777776666 33222 1111 1 122223 233444457777888889999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593 84 KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI 123 (280)
Q Consensus 84 ~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 123 (280)
....-+.+...++.+++++.++.+..|..++++|+.+...
T Consensus 268 g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 268 GHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred ccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998754
No 91
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=93.74 E-value=0.09 Score=43.87 Aligned_cols=63 Identities=10% Similarity=0.247 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593 58 NVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120 (280)
Q Consensus 58 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l 120 (280)
.+..+....+-.+.++|.+.........+.++++.+++.++++|+++..++.+..+++.|+.+
T Consensus 159 ~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 159 GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 344455556677889999999999999999999999999999999999999999999988753
No 92
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.70 E-value=0.21 Score=44.51 Aligned_cols=68 Identities=12% Similarity=0.026 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 210 VMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
..++-|.+-+.-+|+...++++++....++++.....++.++|..+-+|++|+...++..+.+.|.+|
T Consensus 161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GVii 228 (416)
T KOG2765|consen 161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVII 228 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEE
Confidence 33455777788888888899999999999999999999999999999999999999999999999865
No 93
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.67 E-value=3.9 Score=31.88 Aligned_cols=133 Identities=17% Similarity=0.159 Sum_probs=80.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHH
Q 023593 131 VGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLV 210 (280)
Q Consensus 131 ~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (280)
.-++.++.+..+.+..+-.+.|+.+.. -+|.--.+.+...+...+..+....++.++.. .....| |+.
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~--------~spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~~~~~p--wW~ 72 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYL--------GSPLLASLISFLVGTVLLLILLLIKQGHPGLA--AVASAP--WWA 72 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHc--------CChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--hccCCc--hHH
Confidence 456677778888888888888876542 25666667777777776666555533322221 111112 333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhh-hHHHHHHHHHh-cc---ccCcccchhhhHHhhhhhc
Q 023593 211 MTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLN-KIPLSVAGILL-FK---VPTSLENSASIFFGKLALL 276 (280)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~-~v~~~~~~~~~-f~---e~~~~~~~~G~~l~~~g~~ 276 (280)
. .-|.+|..+-..+-....+.++.+...+.... -+.+++++-.= || .+++...++|+.+.+.|.+
T Consensus 73 ~-~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil 142 (150)
T COG3238 73 W-IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGIL 142 (150)
T ss_pred H-HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHH
Confidence 2 24677776666666667777766665544443 34444444332 33 5789999999999999953
No 94
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=90.80 E-value=0.37 Score=39.17 Aligned_cols=57 Identities=9% Similarity=0.002 Sum_probs=51.0
Q ss_pred HHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 221 ISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 221 ~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
-+|.-..++|+.+|+..+.+..-+..+.-+++|+++||++....++..++.+.|.+|
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVm 122 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVM 122 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEE
Confidence 355444678999999999999999999999999999999999999999999999866
No 95
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.57 E-value=1.9 Score=37.47 Aligned_cols=73 Identities=5% Similarity=0.060 Sum_probs=64.1
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593 48 WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120 (280)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l 120 (280)
+|-++.++..+.+.+..+.+-++-++.-.+=+.+++.-+-=++..+++.+..+.+.++.||.++.+.+.|...
T Consensus 238 p~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 238 PDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 4568899999999999999988989887777778888888899999999999999999999999988888754
No 96
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=89.76 E-value=0.8 Score=38.33 Aligned_cols=71 Identities=10% Similarity=0.094 Sum_probs=60.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593 50 LIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120 (280)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l 120 (280)
.++++..++++.++.+.+-+.-..+-++-+-+++.-+--+|+.+.+.++.+..++.+||++-++++.|...
T Consensus 240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 47788888888888888877777776666666777788899999999999999999999999999988765
No 97
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=89.40 E-value=3.4 Score=34.47 Aligned_cols=70 Identities=10% Similarity=0.150 Sum_probs=57.4
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHH
Q 023593 48 WRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIIS 117 (280)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~G 117 (280)
.+....++..|++-++..++.-+.++.++..++.+..++.-...++.+.++++|..+...+.++++++..
T Consensus 221 ~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfls 290 (309)
T COG5070 221 VDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLS 290 (309)
T ss_pred hHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHH
Confidence 3444456667888888999999999999999999999999999999999888988888887776655543
No 98
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=89.31 E-value=6.3 Score=35.03 Aligned_cols=131 Identities=13% Similarity=0.109 Sum_probs=66.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHH-HHHHHHHHHHHHHHHH--HhcchhhhhhcCCCcchH
Q 023593 130 AVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMV-LLNNSLSLPLGVLLVI--VFNEVDYLSRTPLLRLPS 206 (280)
Q Consensus 130 ~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 206 (280)
..|+++..+++++.+.+-+-.||. +-.+||.. ..+.+++..+...... ..++..+..+. .+..
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-----------k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~---~~~~ 71 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-----------KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSA---TPAS 71 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-----------CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHh---CChh
Confidence 379999999999999999988886 23455543 2233333332222111 12233222221 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhhcC-hhhHhHHhhhhhHHHHHHHHHhcc-------ccCcccchhhhHHhhhhh
Q 023593 207 FWLVMTLSGFLGLAISFTSM-WFLHQTG-ATTYSLVGSLNKIPLSVAGILLFK-------VPTSLENSASIFFGKLAL 275 (280)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~-~~~~~~s-~~~~s~~~~l~~v~~~~~~~~~f~-------e~~~~~~~~G~~l~~~g~ 275 (280)
.+....+.|++ ..+.-..| ..+|+.+ +...++.--+..++..++.-++.| ++-.....+|.+++++|.
T Consensus 72 ~l~~~~l~G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 72 TLFWTFLFGVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred HHHHHHHHHHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 12222222332 11121223 4567765 555555555555555555555433 222346678888888775
No 99
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=88.45 E-value=0.52 Score=39.68 Aligned_cols=71 Identities=14% Similarity=0.277 Sum_probs=55.7
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHH----HHHHHHHHHH
Q 023593 49 RLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAA----LFLMIISAIS 120 (280)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~----~~l~~~Gv~l 120 (280)
..++.+++ |+.+...+.+..+|-+...+++.=.+.++..+...+.+.+++|||=+++++.. +++...|..+
T Consensus 208 ~t~~nii~-G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 208 YTWLNIIP-GLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred HHHHHHhh-HHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 34555555 89999888888889998888888888889999999999999999999998654 4444444443
No 100
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=86.98 E-value=2.6 Score=31.22 Aligned_cols=49 Identities=14% Similarity=0.057 Sum_probs=37.8
Q ss_pred HHhhcChhh-HhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 228 FLHQTGATT-YSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 228 ~~~~~s~~~-~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
.+++.+=+. .-+.+.+.-+++.+.|+++.+|..+...++|..+++.|..
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~ 110 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVA 110 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCee
Confidence 455555333 3344577789999999888888889999999999999864
No 101
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=84.66 E-value=22 Score=31.68 Aligned_cols=131 Identities=13% Similarity=0.135 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHH-cCcccc----CcCcHHhhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHHHHHH
Q 023593 22 VYQNFISVVTVTILSF-LGVIST----EPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVITAVGE 95 (280)
Q Consensus 22 ~~r~~~~~~~l~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~ 95 (280)
..|-+++.++.+...- ....+. +..|.+.+......|++.......+-.+.+|+.+|..+-+ .-+.-.+=.++-
T Consensus 39 lv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlip 118 (344)
T PF06379_consen 39 LVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIP 118 (344)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchH
Confidence 3466777777665421 111111 2334456666677777776666666678888776654432 222222222333
Q ss_pred HHHhC-------cccCHHHHHHHHHHHHHHHHHhcC----c-------cccc-hhhHHHHHHHHHHHHHHHHHHHH
Q 023593 96 MYLFN-------KRHDNRVWAALFLMIISAISGGIT----D-------LSFH-AVGYAWQIINCFLTASYSLTLRR 152 (280)
Q Consensus 96 ~~~l~-------e~~~~~~~~~~~l~~~Gv~l~~~~----~-------~~~~-~~G~~~~~~~~~~~a~~~i~~~~ 152 (280)
.++.+ ++-....++++++..+|+++.... | .++| -+|++.+++|.+..|..+.=...
T Consensus 119 pi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~a 194 (344)
T PF06379_consen 119 PIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDA 194 (344)
T ss_pred HHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHc
Confidence 33332 334557899999999999987431 1 1334 37999999999999998875443
No 102
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=82.98 E-value=0.71 Score=39.13 Aligned_cols=67 Identities=12% Similarity=0.121 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhcc
Q 023593 211 MTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLN 277 (280)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~ 277 (280)
-++.++.-.--||..-.+..+++-+..+.+.+-..+...+++|++++.+-.+.++.|.++|+.|..|
T Consensus 81 Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvm 147 (336)
T KOG2766|consen 81 YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVM 147 (336)
T ss_pred hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEE
Confidence 3444666555666555677889999999999999999999999999999999999999999999876
No 103
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.93 E-value=0.93 Score=39.66 Aligned_cols=114 Identities=14% Similarity=0.115 Sum_probs=75.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHH
Q 023593 129 HAVGYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFW 208 (280)
Q Consensus 129 ~~~G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (280)
+..|.++++.+++..+..-+..||-+++.+..... .++- ..+...++.+|
T Consensus 19 ~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r--------------------------a~~g----g~~yl~~~~Ww 68 (335)
T KOG2922|consen 19 NIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR--------------------------AGEG----GYGYLKEPLWW 68 (335)
T ss_pred ceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc--------------------------ccCC----CcchhhhHHHH
Confidence 35788888988888887777778766543210000 0110 00111223334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhc
Q 023593 209 LVMTLSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALL 276 (280)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~ 276 (280)
.-++..+ .|=+. +|.+....++.-.+.++.+.-+...+++..+++|.+++...+|.+++++|+.
T Consensus 69 ~G~ltm~-vGei~---NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst 132 (335)
T KOG2922|consen 69 AGMLTMI-VGEIA---NFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGST 132 (335)
T ss_pred HHHHHHH-HHhHh---hHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccE
Confidence 4333322 23223 3455667788888888899999999999999999999999999999999984
No 104
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=78.55 E-value=7.4 Score=34.14 Aligned_cols=71 Identities=15% Similarity=0.147 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593 53 VWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI 123 (280)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 123 (280)
.+...+++..+..++..++.++.|+.+.++.....-..+.+...++.+++.++....++.+.++|-.+..+
T Consensus 230 ~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 230 VMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence 34444566677888888999999999999988777777777777777788888888888877777766543
No 105
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=75.99 E-value=2.1 Score=36.80 Aligned_cols=56 Identities=21% Similarity=0.178 Sum_probs=49.9
Q ss_pred HHHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhhccCCC
Q 023593 225 SMWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLALLNGLD 280 (280)
Q Consensus 225 ~~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~~~~~~ 280 (280)
..+|+|+.+...+.+--.+..++++++.+++++++-+..-..|..+++.|=..|+|
T Consensus 119 nnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvd 174 (347)
T KOG1442|consen 119 NNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVD 174 (347)
T ss_pred cceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccc
Confidence 35789999888888878888999999999999999999999999999999888877
No 106
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.55 E-value=37 Score=26.55 Aligned_cols=104 Identities=9% Similarity=0.108 Sum_probs=64.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCccccCcCc--HH-hhhHHHHHHHHHHHHHHHhhhhhcccchhhhHHh-hhhHHHHH
Q 023593 16 AGISLMVYQNFISVVTVTILSFLGVISTEPLT--WR-LIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVL-KNVTNVIT 91 (280)
Q Consensus 16 ~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~v 91 (280)
.|..=++..+.++++++......+ .+.+... ++ .|+.+.. |++.+.....+......+.+++.+.+ .+-+-+.-
T Consensus 33 spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~~~G-G~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~g 110 (150)
T COG3238 33 SPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWAWIG-GLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMG 110 (150)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHHHHc-cchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHH
Confidence 377777788888776665544332 2222222 22 3554444 55555666666667777776655544 55555555
Q ss_pred HHHHHHHh----CcccCHHHHHHHHHHHHHHHHH
Q 023593 92 AVGEMYLF----NKRHDNRVWAALFLMIISAISG 121 (280)
Q Consensus 92 ~i~~~~~l----~e~~~~~~~~~~~l~~~Gv~l~ 121 (280)
++..-+=. ++++++.++.++++..+|+.+.
T Consensus 111 lliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 111 LLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 66555433 3679999999999999996554
No 107
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=71.01 E-value=7.6 Score=28.24 Aligned_cols=57 Identities=11% Similarity=0.028 Sum_probs=44.3
Q ss_pred HHHHhhhhhcccchhhhHHh-hhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593 64 MLITSMFSLKYINVAMVTVL-KNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120 (280)
Q Consensus 64 ~~~~~~~al~~~~~~~~~~l-~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l 120 (280)
...+++.-+++.|.+.+.-. .+++-.|+++.+..+..|-...+.+++..+.++|+.+
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 44556678899988877654 5678889999998765566788889999999998864
No 108
>PRK02237 hypothetical protein; Provisional
Probab=70.35 E-value=11 Score=27.59 Aligned_cols=38 Identities=11% Similarity=-0.036 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593 86 VTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI 123 (280)
Q Consensus 86 ~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 123 (280)
-..+...+..+.+.|+||++.++.+..+..+|+.++..
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 44445557888889999999999999999999988744
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=68.23 E-value=10 Score=27.58 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593 85 NVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI 123 (280)
Q Consensus 85 ~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 123 (280)
--..+...+..+.+-|+||++.++++..+..+|+.++..
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 345566677888889999999999999999999988754
No 110
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=64.23 E-value=13 Score=31.72 Aligned_cols=124 Identities=16% Similarity=0.187 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCCChhHHHHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcchHHHHHH
Q 023593 132 GYAWQIINCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNSLSLPLGVLLVIVFNEVDYLSRTPLLRLPSFWLVM 211 (280)
Q Consensus 132 G~~~~~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (280)
|++.+++|++++.-.-+=.||.- ..|+.-.+.+++..............+. +. ++..-
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~----------~gDg~~fQw~~~~~i~~~g~~v~~~~~~-------p~-----f~p~a 58 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD----------TGDGFFFQWVMCSGIFLVGLVVNLILGF-------PP-----FYPWA 58 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc----------CCCcHHHHHHHHHHHHHHHHHHHHhcCC-------Cc-----ceeHH
Confidence 56677778887776666666641 2355554555444333333222222221 11 11111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC-hhhHhHHhhhhhHHHHHHHHH-hcccc-----CcccchhhhHHhhhhhcc
Q 023593 212 TLSGFLGLAISFTSMWFLHQTG-ATTYSLVGSLNKIPLSVAGIL-LFKVP-----TSLENSASIFFGKLALLN 277 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~s-~~~~s~~~~l~~v~~~~~~~~-~f~e~-----~~~~~~~G~~l~~~g~~~ 277 (280)
.+.|.+-...|....-.+|..+ +.-..+++..+-+..=+.|-+ +||++ -++.+++|++++++|+.+
T Consensus 59 mlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~ 131 (254)
T PF07857_consen 59 MLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGII 131 (254)
T ss_pred HhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHh
Confidence 3334443334444444555554 333444444444444444432 45532 236788899998888764
No 111
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=62.75 E-value=16 Score=31.66 Aligned_cols=50 Identities=16% Similarity=0.181 Sum_probs=42.6
Q ss_pred HHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593 226 MWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL 275 (280)
Q Consensus 226 ~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~ 275 (280)
+..+..++++..++.--.-.++.-+++..+++.+++..+|+|+..+..|-
T Consensus 104 ~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGl 153 (372)
T KOG3912|consen 104 YVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGL 153 (372)
T ss_pred HHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhh
Confidence 34566788888888877777888888999999999999999999988885
No 112
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=52.35 E-value=2.6e+02 Score=28.14 Aligned_cols=42 Identities=14% Similarity=0.181 Sum_probs=31.2
Q ss_pred hHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHH
Q 023593 80 VTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISG 121 (280)
Q Consensus 80 ~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 121 (280)
+.++..+.|+-.+.++.....+|.+...+.+.+-.++|..-+
T Consensus 13 a~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 13 AVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred HHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 356778899999988888877776666677777677776544
No 113
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=51.24 E-value=22 Score=25.85 Aligned_cols=59 Identities=8% Similarity=0.087 Sum_probs=38.0
Q ss_pred HHHHHHhhhhhcccchhhhHHhhh-hHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHH
Q 023593 62 VGMLITSMFSLKYINVAMVTVLKN-VTNVITAVGEMYLFNKRHDNRVWAALFLMIISAIS 120 (280)
Q Consensus 62 ~~~~~~~~~al~~~~~~~~~~l~~-~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l 120 (280)
+.+.-.+=.+-+.-|.++--+++= .+-...+.++.+++||++++....+-++...++..
T Consensus 46 ~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 46 CLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 344444444555555555444433 33334456778889999999999999888777654
No 114
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=50.58 E-value=2.1e+02 Score=26.41 Aligned_cols=63 Identities=3% Similarity=-0.123 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc-CccccchhhHHHHHHHHHHHHHHHHHHHH
Q 023593 87 TNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI-TDLSFHAVGYAWQIINCFLTASYSLTLRR 152 (280)
Q Consensus 87 ~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~-~~~~~~~~G~~~~~~~~~~~a~~~i~~~~ 152 (280)
.-+..++.++. .++|++....+.-. ++|..-++. .+.-..+..++.++++++..-...-+.||
T Consensus 253 g~l~~~~~~~~-~~gk~~~~~~~nG~--LAGLVaITa~~~~v~p~~A~iiG~iag~v~~~~~~~~~~ 316 (404)
T TIGR03644 253 GAIAALLLTKL-LFGKADLTMVLNGA--LAGLVAITAEPLTPSPLAATLIGAVGGVIVVFSIVLLDK 316 (404)
T ss_pred HHHHHHHHHHH-HcCCCCHHHHHHHH--HhhhhhhccccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444455554 45677776644432 233332222 23222344566666666654443334454
No 115
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=44.78 E-value=27 Score=25.38 Aligned_cols=38 Identities=11% Similarity=-0.046 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhc
Q 023593 86 VTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGI 123 (280)
Q Consensus 86 ~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 123 (280)
...+...+..+..-|+||++.+|.+..+..+|+.++..
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILF 104 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEe
Confidence 34455566777888999999999999999999877644
No 116
>PRK10666 ammonium transporter; Provisional
Probab=44.73 E-value=2.6e+02 Score=25.96 Aligned_cols=27 Identities=7% Similarity=0.006 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcChhhHh
Q 023593 212 TLSGFLGLAISFTSMWFLHQTGATTYS 238 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~s~~~~s 238 (280)
+.....++..++..+..++++.+.+.+
T Consensus 382 ~~~~~~~~~~t~ii~~il~~~~~lRvs 408 (428)
T PRK10666 382 AITIVWSGVVAFIGYKLADLTVGLRVP 408 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcCC
Confidence 334445555666666778887776654
No 117
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=43.90 E-value=1.2e+02 Score=26.61 Aligned_cols=48 Identities=17% Similarity=0.039 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 023593 108 WAALFLMIISAISGGITDLSFHAVGYAWQIINCFLTASYSLTLRRVMD 155 (280)
Q Consensus 108 ~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~~~~~~~~a~~~i~~~~~~~ 155 (280)
..|++..+.|..+..+.+.++++.=.++++++++..=....+.+...+
T Consensus 21 ~aai~Pv~~G~a~A~~~~~~f~~~~~ll~Li~~~~iq~~vN~~NdY~D 68 (303)
T COG1575 21 PAAIAPVIVGTALAFWYGKSFNLLVALLALIAAILLQILVNLANDYFD 68 (303)
T ss_pred HHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 478899999999988877778876666666666644444444444334
No 118
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=40.95 E-value=2.3e+02 Score=24.77 Aligned_cols=51 Identities=10% Similarity=0.166 Sum_probs=40.0
Q ss_pred cchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc
Q 023593 75 INVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD 125 (280)
Q Consensus 75 ~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 125 (280)
-.+..+..+.-.---.|.+++++++.+.++-.-..+..++..|+.+=.+++
T Consensus 284 fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 284 FGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 345555555555566788999999999999999999999999998866655
No 119
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.10 E-value=1e+02 Score=22.21 Aligned_cols=52 Identities=12% Similarity=0.067 Sum_probs=34.3
Q ss_pred hhhcccchhhhHHhhhh-HHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHH
Q 023593 70 FSLKYINVAMVTVLKNV-TNVITAVGEMYLFNKRHDNRVWAALFLMIISAISG 121 (280)
Q Consensus 70 ~al~~~~~~~~~~l~~~-~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 121 (280)
.+-+..++++--.++-- +-..-..++.+.+||..++..+.+-.++..|+.++
T Consensus 61 iG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 61 IGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred hhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 34444555544443321 12223447888899999999999999888888765
No 120
>PRK02237 hypothetical protein; Provisional
Probab=35.82 E-value=39 Score=24.74 Aligned_cols=37 Identities=5% Similarity=-0.170 Sum_probs=30.0
Q ss_pred HHhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593 239 LVGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL 275 (280)
Q Consensus 239 ~~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~ 275 (280)
..+-+=.+.++..++.+-|++|+...++|..+++.|.
T Consensus 64 AYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~ 100 (109)
T PRK02237 64 AYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGM 100 (109)
T ss_pred HhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhH
Confidence 3344445667788888899999999999999999986
No 121
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=33.75 E-value=40 Score=24.63 Aligned_cols=36 Identities=11% Similarity=-0.017 Sum_probs=29.6
Q ss_pred HhhhhhHHHHHHHHHhccccCcccchhhhHHhhhhh
Q 023593 240 VGSLNKIPLSVAGILLFKVPTSLENSASIFFGKLAL 275 (280)
Q Consensus 240 ~~~l~~v~~~~~~~~~f~e~~~~~~~~G~~l~~~g~ 275 (280)
.+-+=.+.++..++.+=+++|+...++|..+++.|.
T Consensus 63 YGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~ 98 (107)
T PF02694_consen 63 YGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGV 98 (107)
T ss_pred hhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhH
Confidence 333445677888888889999999999999999986
No 122
>PLN02776 prenyltransferase
Probab=33.13 E-value=3.6e+02 Score=24.20 Aligned_cols=37 Identities=14% Similarity=-0.034 Sum_probs=26.1
Q ss_pred HHHHhhcChhhHhHHhhhhhHHHHHHHHHhccccCccc
Q 023593 226 MWFLHQTGATTYSLVGSLNKIPLSVAGILLFKVPTSLE 263 (280)
Q Consensus 226 ~~~~~~~s~~~~s~~~~l~~v~~~~~~~~~f~e~~~~~ 263 (280)
|...|+.++... .++..-.....++||.--.+++++.
T Consensus 116 Yt~lKR~t~~~~-~lG~~~Ga~ppL~Gw~Avtg~~~~~ 152 (341)
T PLN02776 116 YTPLKQIHPANT-WVGAVVGAIPPLMGWAAASGQLDAG 152 (341)
T ss_pred HHhHccCCchhH-HHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 334788777764 7777777777788888777666643
No 123
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=29.26 E-value=2.9e+02 Score=24.51 Aligned_cols=63 Identities=10% Similarity=0.146 Sum_probs=45.7
Q ss_pred HHHHHHHHHhhhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHH
Q 023593 59 VIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISG 121 (280)
Q Consensus 59 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 121 (280)
.+-++.-...+.=+..+++=+-++..--.-+.+.+++..+.+++.+-.-|++..+...|+..-
T Consensus 251 ~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 251 LLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 333444455556666677666667777777788888888888888888888888888887665
No 124
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function. Proteins usually have between 6 and 9 predicted transmembrane segments.
Probab=26.11 E-value=4.2e+02 Score=22.72 Aligned_cols=97 Identities=12% Similarity=0.136 Sum_probs=45.4
Q ss_pred hhhHHHHHHHHHHHHHHHh----hhhhcccchhhhHHhhhhHHHHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHhcCc
Q 023593 50 LIKVWLPVNVIFVGMLITS----MFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKRHDNRVWAALFLMIISAISGGITD 125 (280)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~----~~al~~~~~~~~~~l~~~~pi~v~i~~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 125 (280)
+++.+.++++.-....... .+.+++-|..+....- --+.-.+-...-..+|.+++++...++..+-+......+
T Consensus 53 ~~~fL~~l~~G~~~gi~~~s~~i~~ll~~yp~~t~~fF~--GLIlgSip~l~k~~~~~~~~~~~~~~~g~~i~~~~~~~~ 130 (257)
T PF04018_consen 53 NLKFLLPLGIGILIGILLFSKVISYLLENYPIPTYSFFF--GLILGSIPFLYKEIKKFSPKSIIFFLLGAIIALLLSFLS 130 (257)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHcc
Confidence 5667777766543333222 3344444433333322 222222222222234567777666555555444443222
Q ss_pred c----ccchhhHHHHHHHHHHHHHHHH
Q 023593 126 L----SFHAVGYAWQIINCFLTASYSL 148 (280)
Q Consensus 126 ~----~~~~~G~~~~~~~~~~~a~~~i 148 (280)
. +.+....++.+++....+...+
T Consensus 131 ~~~~~~~~~~~~~~lf~~G~ia~~AMI 157 (257)
T PF04018_consen 131 SATQSSLSNPSYLYLFLAGAIAACAMI 157 (257)
T ss_pred ccchhccCcchHHHHHHHHHHHHHHHh
Confidence 1 2233566666666666665444
No 125
>COG3274 Predicted O-acyltransferase [General function prediction only]
Probab=20.89 E-value=6.1e+02 Score=22.65 Aligned_cols=78 Identities=10% Similarity=0.205 Sum_probs=0.0
Q ss_pred CcCcH-HhhhHHHHHHHHHHHHHHHhhhhhcccchhhh-------HHhhhhHHHHHHHHHHHHhCcc-cCHHHHHHHHHH
Q 023593 44 EPLTW-RLIKVWLPVNVIFVGMLITSMFSLKYINVAMV-------TVLKNVTNVITAVGEMYLFNKR-HDNRVWAALFLM 114 (280)
Q Consensus 44 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~-------~~l~~~~pi~v~i~~~~~l~e~-~~~~~~~~~~l~ 114 (280)
+|..| |..|.+....+...=......+=-...+.... +..+-+.|+|.++-++++++|| ..++.+.-+.+.
T Consensus 3 ~ri~wiD~~r~iA~f~VV~iH~~~~~~t~~~~vs~~~w~i~nvlns~sr~aVPLFfmISGyL~~~e~s~q~~~f~ri~l~ 82 (332)
T COG3274 3 PRIVWIDLLRSIACFMVVMIHSTLWSVTEAHFVSPTLWIIANVLNSASRVAVPLFFMISGYLFFGERSAQPKLFLRIGLS 82 (332)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHH
Q ss_pred HHHHHHH
Q 023593 115 IISAISG 121 (280)
Q Consensus 115 ~~Gv~l~ 121 (280)
.++-.++
T Consensus 83 ~if~sii 89 (332)
T COG3274 83 LIFYSII 89 (332)
T ss_pred HHHHHHH
Done!