BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023597
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2
OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1
Length = 289
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 177/286 (61%), Gaps = 11/286 (3%)
Query: 1 MGNVSGRQDGE--GCSGVKKREYEEGFEQSLTELGHGDP------MLHSPPHQSPRAFQP 52
MGNV+ R++ S V+ + E ++++ G+ M SPPH SPRA Q
Sbjct: 1 MGNVNAREEANSNNASAVEDEDAEICSREAMSAASDGNHVAPPELMGQSPPH-SPRATQS 59
Query: 53 PPIFTSQVPMDPLPRSGDLMQVRNHAAERSMAYYEELSYEKQVAAAITWSLGGKQVAVTG 112
P +F QVP+ PL R ++ + + YEE S E+ + ITW GGK++AV G
Sbjct: 60 PLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEG 119
Query: 113 SWDNWENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSGNAYNVLD 172
SWDNW+ L R GKDF IMK+LPSGVY YRFIVD R+AP++P DD+GN +N+LD
Sbjct: 120 SWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILD 179
Query: 173 LQEYIPEVPPSLSEFEQPPSPPSSYDNQPLSDSDFAKLPPELPPQLQITSLNRPSSSSSD 232
LQ+Y+PE S+S FE P SP +SY N L D++K PP +PP LQ+T LN P+++
Sbjct: 180 LQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDI 239
Query: 233 QS-LLRPQHTVLNHLFIQN-TDGRQPMAIGSTHRFRQKYATVVLYK 276
S L RPQH +LNHL++Q G +A+GSTHRF KY TVVLYK
Sbjct: 240 PSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYK 285
>sp|Q84VQ1|KINB1_ARATH SNF1-related protein kinase regulatory subunit beta-1
OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1
Length = 283
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 134/227 (59%), Gaps = 6/227 (2%)
Query: 55 IFTSQVPMDPLPRSGDLMQVRNHAAERSMAYYEELSYEKQVAAAITWSLGGKQVAVTGSW 114
+F QVP+ PL R+ + N +S ++ E+ + ITW+ GG VAV GSW
Sbjct: 62 LFAPQVPVAPLQRA-NAPPPNNIQWNQSQRVFDNPP-EQGIPTIITWNQGGNDVAVEGSW 119
Query: 115 DNWENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSGNAYNVLDLQ 174
DNW + L + GKD I+ +LPSG+YHY+ IVD +Y PD+P+ D+ GN N+LD+
Sbjct: 120 DNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVH 179
Query: 175 EYIPEVPPSLSEFEQPPSPPSSYDNQPLSDSDFAKLPPELPPQLQITSLNRPSSSSSDQS 234
++PE P S+ EFE PPSP SY + D+AK P +PPQL +T L ++
Sbjct: 180 NFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLL---GTTEETAI 236
Query: 235 LLRPQHTVLNHLFI-QNTDGRQPMAIGSTHRFRQKYATVVLYKPSGR 280
+PQH VLNH+FI Q + +A+G THRF KY TVVLYKP R
Sbjct: 237 ATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283
>sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 100 bits (250), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 112/232 (48%), Gaps = 23/232 (9%)
Query: 66 PRSGDLM---QVRNHAAERSMAYYEELSYEKQVAA-----AITWSLGGKQVAVTGSWDNW 117
P DL +++ E +A+ +L + A W+ GGK+V ++GS++NW
Sbjct: 41 PEDADLFHSEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNW 100
Query: 118 ENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSGNAYNVLDLQEYI 177
+ PL R +FV + LP G + Y+F VD + P P G NV+ +++
Sbjct: 101 SKL-PLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPVVTSQLGTVNNVIQVKKTD 159
Query: 178 PEVPPSL--------SEFEQPPSPPSSYDNQPLSDS--DFAKLPPELPPQLQITSLNRPS 227
EV +L E SPP Y +P + K PP LPP L LN+ +
Sbjct: 160 FEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYISKPEERFKAPPILPPHLLQVILNKDT 219
Query: 228 SSSSDQSLL-RPQHTVLNHLF-IQNTDGRQPMAIGSTHRFRQKYATVVLYKP 277
S D +LL P H +LNHL+ + DG M + +THR+++KY T +LYKP
Sbjct: 220 GISCDPALLPEPNHVMLNHLYALSIKDGV--MVLSATHRYKKKYVTTLLYKP 269
>sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 97 AAITWSLGGKQVAVTGSWDNWENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPD 156
I WS GGK+V ++GS++NW PL + DFV + LP G + Y+F VD + P
Sbjct: 78 TVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPS 137
Query: 157 VPWECDDSGNAYNVLDLQEYIPEVPPSL----------SEFEQPPSPPSSYDNQ--PLSD 204
P G N++ +++ EV +L S + SPP Y +
Sbjct: 138 EPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRS 197
Query: 205 SDFAKLPPELPPQLQITSLNRPSSSSSDQSLL-RPQHTVLNHLFIQNTDGRQPMAIGSTH 263
+ K PP LPP L LN+ ++ S D +LL P H +LNHL+ +T M + +TH
Sbjct: 198 EERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSTKDSV-MVLSATH 256
Query: 264 RFRQKYATVVLYKP 277
R+++KY T +LYKP
Sbjct: 257 RYKKKYVTTLLYKP 270
>sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus
GN=Prkab1 PE=1 SV=4
Length = 270
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 66 PRSGDLMQVRNHAA---ERSMAYYEELSYEKQVAA-----AITWSLGGKQVAVTGSWDNW 117
P D+ A E +A+ +L ++ A W+ GGK+V ++GS++NW
Sbjct: 41 PEDADIFHTEEMKAPEKEEFLAWQHDLEVNEKAPAQARPTVFRWTGGGKEVYLSGSFNNW 100
Query: 118 ENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSGNAYNVLDLQEYI 177
+ PL R +FV + LP G + Y+F VD + P P G N++ +++
Sbjct: 101 SKL-PLTRSQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTD 159
Query: 178 PEVPPSL--------SEFEQPPSPPSSYDNQPLSDS--DFAKLPPELPPQLQITSLNRPS 227
EV +L E SPP Y +P + K PP LPP L LN+ +
Sbjct: 160 FEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYISKPEERFKAPPILPPHLLQVILNKDT 219
Query: 228 SSSSDQSLL-RPQHTVLNHLF-IQNTDGRQPMAIGSTHRFRQKYATVVLYKP 277
S D +LL P H +LNHL+ + DG M + +THR+++KY T +LYKP
Sbjct: 220 GISCDPALLPEPNHVMLNHLYALSIKDGV--MVLSATHRYKKKYVTTLLYKP 269
>sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens
GN=PRKAB2 PE=1 SV=1
Length = 272
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 97 AAITWSLGGKQVAVTGSWDNWENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPD 156
I WS GGK+V ++GS++NW PL + DFV + LP G + Y+F VD + P
Sbjct: 79 TVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPS 138
Query: 157 VPWECDDSGNAYNVLDLQEYIPEVPPSL----------SEFEQPPSPPSSYDNQ--PLSD 204
P G N++ +++ EV +L S + SPP Y +
Sbjct: 139 EPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFRS 198
Query: 205 SDFAKLPPELPPQLQITSLNRPSSSSSDQSLL-RPQHTVLNHLFIQNTDGRQPMAIGSTH 263
+ K PP LPP L LN+ ++ S D +LL P H +LNHL+ + M + +TH
Sbjct: 199 EERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKD-SVMVLSATH 257
Query: 264 RFRQKYATVVLYKP 277
R+++KY T +LYKP
Sbjct: 258 RYKKKYVTTLLYKP 271
>sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens
GN=PRKAB1 PE=1 SV=4
Length = 270
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 23/232 (9%)
Query: 66 PRSGDLM---QVRNHAAERSMAYYEELSYEKQVAA-----AITWSLGGKQVAVTGSWDNW 117
P DL +++ E +A+ +L + A W+ GGK+V ++GS++NW
Sbjct: 41 PEDADLFHSEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNW 100
Query: 118 ENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSGNAYNVLDLQEYI 177
+ PL R +FV + LP G + Y+F VD + P P G N++ +++
Sbjct: 101 SKL-PLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTD 159
Query: 178 PEVPPSL--------SEFEQPPSPPSSYDNQP--LSDSDFAKLPPELPPQLQITSLNRPS 227
EV +L E SPP Y +P + + PP LPP L LN+ +
Sbjct: 160 FEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDT 219
Query: 228 SSSSDQSLL-RPQHTVLNHLF-IQNTDGRQPMAIGSTHRFRQKYATVVLYKP 277
S D +LL P H +LNHL+ + DG M + +THR+++KY T +LYKP
Sbjct: 220 GISCDPALLPEPNHVMLNHLYALSIKDGV--MVLSATHRYKKKYVTTLLYKP 269
>sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 23/232 (9%)
Query: 66 PRSGDLM---QVRNHAAERSMAYYEELSYEKQVAA-----AITWSLGGKQVAVTGSWDNW 117
P DL +++ E +A+ +L + A W+ GGK+V ++GS++NW
Sbjct: 41 PEDADLFHSEEIKAPEKEEFLAWQRDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNW 100
Query: 118 ENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSGNAYNVLDLQEYI 177
+ PL R +FV + LP G + Y+F VD + P P G N++ +++
Sbjct: 101 SKL-PLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTD 159
Query: 178 PEVPPSL--------SEFEQPPSPPSSYDNQP--LSDSDFAKLPPELPPQLQITSLNRPS 227
EV +L E SPP Y +P + + PP LPP L LN+ +
Sbjct: 160 FEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDT 219
Query: 228 SSSSDQSLL-RPQHTVLNHLF-IQNTDGRQPMAIGSTHRFRQKYATVVLYKP 277
S D +LL P H +LNHL+ + DG M + +THR+++KY T +LYKP
Sbjct: 220 GISCDPALLPEPNHVMLNHLYALSIKDGV--MVLSATHRYKKKYVTTLLYKP 269
>sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus
GN=Prkab1 PE=1 SV=2
Length = 270
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 23/232 (9%)
Query: 66 PRSGDLM---QVRNHAAERSMAYYEELSYEKQVAA-----AITWSLGGKQVAVTGSWDNW 117
P D+ +++ E +A+ +L + A W+ GGK+V ++GS++NW
Sbjct: 41 PEDADIFHSEEIKAPEKEEFLAWQHDLEANDKAPAQARPTVFRWTGGGKEVYLSGSFNNW 100
Query: 118 ENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSGNAYNVLDLQEYI 177
+ PL R +FV + LP G + Y+F VD + P P G N++ +++
Sbjct: 101 SKL-PLTRSQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTD 159
Query: 178 PEVPPSL--------SEFEQPPSPPSSYDNQPLSDS--DFAKLPPELPPQLQITSLNRPS 227
EV +L E SPP Y +P + K PP LPP L LN+ +
Sbjct: 160 FEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYMSKPEERFKAPPILPPHLLQVILNKDT 219
Query: 228 SSSSDQSLL-RPQHTVLNHLF-IQNTDGRQPMAIGSTHRFRQKYATVVLYKP 277
S D +LL P H +LNHL+ + DG M + +THR+++KY T +LYKP
Sbjct: 220 GISCDPALLPEPNHVMLNHLYALSIKDGV--MVLSATHRYKKKYVTTLLYKP 269
>sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 97 AAITWSLGGKQVAVTGSWDNWENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPD 156
I WS GGK+V ++GS++NW PL + DFV + LP G + Y+F VD + P
Sbjct: 78 TVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPS 137
Query: 157 VPWECDDSGNAYNVLDLQEYIPEVPPSL----------SEFEQPPSPPSSYDNQ--PLSD 204
P G N++ +++ EV +L S + SPP Y +
Sbjct: 138 EPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRS 197
Query: 205 SDFAKLPPELPPQLQITSLNRPSSSSSDQSLL-RPQHTVLNHLFIQNTDGRQPMAIGSTH 263
+ K PP LPP L LN+ ++ S D +LL P H +LNHL+ + M + +TH
Sbjct: 198 EERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSV-MVLSATH 256
Query: 264 RFRQKYATVVLYKP 277
R+++KY T +LYKP
Sbjct: 257 RYKKKYVTTLLYKP 270
>sp|Q9ZUU8|KINB3_ARATH SNF1-related protein kinase regulatory subunit beta-3
OS=Arabidopsis thaliana GN=KINB3 PE=1 SV=1
Length = 114
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 187 FEQPPSPPSSYDNQPLSDSDFAKLPPELPPQLQITSLNRPSSSSSDQSLLRPQHTVLNHL 246
FE P SP SSY+N S D + PP +PP LQ + L + S + PQ+ VLNHL
Sbjct: 17 FEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLL---GNQGSMELAYAPQNVVLNHL 73
Query: 247 FIQNTDG-RQPMAIGSTHRFRQKYATVVLYKPSGR 280
+I+N D R +A+G +HRFR K+ TVV+YKP R
Sbjct: 74 YIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQR 108
>sp|P78789|YC63_SCHPO Uncharacterized protein C1919.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1919.03c PE=1 SV=2
Length = 298
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 95 VAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYA 154
V I W GG+ V VTGS+ W+ L + +D+ ++ L G ++F+VD +
Sbjct: 99 VPTIIRWRGGGEVVYVTGSFSRWKKKIQLLK-SEDYTVLLQLRPGTQRFKFLVDGIWCCS 157
Query: 155 PDVPWECDDSGNAYNVLDLQ----------EYIPEVPPSL-----SEFEQPPSPPSSYDN 199
D P D GN YN L+++ E + +V L SE EQ + ++
Sbjct: 158 SDFPTATDAEGNLYNYLEVEANEKLGASIDERLSQVHTDLPMEEKSESEQYSTEIPAFLT 217
Query: 200 QPLSDSDFAKLPPELPPQLQITSLNRPSSSSSDQSLL-RPQHTVLNHLFIQNTDGRQPMA 258
PP LPP L+ LN ++ DQS+L P H +LNHL NT +A
Sbjct: 218 SNTLQELKLPKPPSLPPHLEKCILNSNTAYKEDQSVLPNPNHVLLNHLAAANTQ-LGVLA 276
Query: 259 IGSTHRFRQKYATVVLYK 276
+ +T R+ +KY T ++K
Sbjct: 277 LSATTRYHRKYVTTAMFK 294
>sp|P34164|SIP2_YEAST SNF1 protein kinase subunit beta-2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP2 PE=1 SV=3
Length = 415
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 110/281 (39%), Gaps = 76/281 (27%)
Query: 66 PRSGDLMQVRNHAAERSMAYYEELSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLW- 124
PR Q+R A+ + E+ V I W GG +V VTGS+ W + L
Sbjct: 138 PREEGQQQIR---AKEASGGPSEIKSSLMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIP 194
Query: 125 ---RLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSGNAYNVLDLQEYIPEVP 181
G V +++LP G + +RFIVD LR + +P D GN N +++++ PE
Sbjct: 195 DSDNNGSFHVKLRLLP-GTHRFRFIVDNELRVSDFLPTATDQMGNFVNYIEVRQ--PEKN 251
Query: 182 PSLSEFEQ--------PPSPPSSYDNQPLSDSD-----FAKLPPELPPQ--LQIT----- 221
P+ + P S SS Q D D + + +L P+ L+ T
Sbjct: 252 PTNEKIRSKEADSMRPPTSDRSSIALQIGKDPDDFGDGYTRFHEDLSPRPPLEYTTDIPA 311
Query: 222 -------------SLNRPSSSSSDQSLLRP-------QHTVLNHL------FIQNTDGRQ 255
+L+R S++D S L P ++ +LN F +N G
Sbjct: 312 VFTDPSVMERYYYTLDR-QQSNTDTSWLTPPQLPPQLENVILNKYYATQDQFNENNSGAL 370
Query: 256 P-------------------MAIGSTHRFRQKYATVVLYKP 277
P + + S R++QKY T +LY P
Sbjct: 371 PIPNHVVLNHLVTSSIKHNTLCVASIVRYKQKYVTQILYTP 411
>sp|Q04739|GAL83_YEAST SNF1 protein kinase subunit beta-3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAL83 PE=1 SV=1
Length = 417
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 152 RYAPDVPWECDDSGNAYNVLDLQ-------EYIPEVPPSLSEFEQPPSPPSSYDNQPLSD 204
R A ++ E DD G+ Y + EY ++P ++ + D Q +
Sbjct: 280 RIALEIEKEPDDMGDGYTRFHDETPAKPNLEYTQDIPAVFTDPNVMEQYYLTLDQQQNNH 339
Query: 205 SDFAKL-PPELPPQLQITSLNRPSSSSSDQS---LLRPQHTVLNHLFIQNTDGRQPMAIG 260
+ A L PP+LPP L+ LN S++ +D + L P H +LNHL + + +
Sbjct: 340 QNMAWLTPPQLPPHLENVILNSYSNAQTDNTSGALPIPNHVILNHLATSSI-KHNTLCVA 398
Query: 261 STHRFRQKYATVVLYKP 277
S R++QKY T +LY P
Sbjct: 399 SIVRYKQKYVTQILYTP 415
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 99 ITWSLGGKQVAVTGSWDNWENVDPLWRLGKDFVIMKM---LPSGVYHYRFIVDECLRYAP 155
ITW GG +V VTGS+ W + L + +M + LP G + +RFIVD LR++
Sbjct: 166 ITWQQGGNKVYVTGSFTGWRKMIGLVPVPGQPGLMHVKLQLPPGTHRFRFIVDNELRFSD 225
Query: 156 DVPWECDDSGNAYNVLDL 173
+P D GN N +++
Sbjct: 226 YLPTATDQMGNFVNYMEV 243
>sp|P80387|AAKB1_PIG 5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus
scrofa GN=PRKAB1 PE=1 SV=1
Length = 122
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 60 VPMDPLPRSGDLM---QVRNHAAERSMAYYEELSYEKQVAA-----AITWSLGGKQVAVT 111
+ MD P DL +++ E +A+ +L + +A W+ GGK+V ++
Sbjct: 1 ILMDS-PEDADLYHSEEIKAPEKEEFLAWQHDLEVNDKASAQARPTVFRWTGGGKEVYLS 59
Query: 112 GSWDNWENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSGNAYNVL 171
GS++NW + PL R +FV + LP G + Y+F+VD + P P G N++
Sbjct: 60 GSFNNWSKL-PLTRSHNNFVAILDLPEGEHQYKFLVDGQWTHDPSEPVVTSQLGTVNNII 118
Query: 172 DLQE 175
+++
Sbjct: 119 QVKK 122
>sp|F4J117|LSF1_ARATH Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis
thaliana GN=LSF1 PE=1 SV=1
Length = 591
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 105 GKQVAVTGSWD-NW-ENVDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPDVPWECD 162
G++V + G + NW E + + G F L G Y+Y++I++ R++ P E D
Sbjct: 466 GEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGKYYYKYIINGDWRHSATSPTERD 525
Query: 163 DSGNAYNVLDLQEYIPEVPPSLSE 186
D GN N++ + + + V P++ +
Sbjct: 526 DRGNTNNIIVVGD-VANVRPTIQQ 548
>sp|E7NIP0|CRP1_YEASO Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain FostersO) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|C7GJZ2|CRP1_YEAS2 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain JAY291) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.0 bits (79), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|E7KDM2|CRP1_YEASA Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain AWRI796) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|P38845|CRP1_YEAST Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CRP1 PE=1 SV=1
Length = 465
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|A6ZT54|CRP1_YEAS7 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|B3LSR0|CRP1_YEAS1 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.0 bits (79), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|E7KPJ0|CRP1_YEASL Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain Lalvin QA23) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|C8Z9U3|CRP1_YEAS8 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=CRP1 PE=3
SV=1
Length = 465
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|E7LVH4|CRP1_YEASV Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain VIN 13) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|E7Q4T7|CRP1_YEASB Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain FostersB) GN=CRP1 PE=3 SV=1
Length = 465
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 89 LSYEKQVAAAITWSLGGKQVAVTGSWDNWENVDPLWRLGK-DFVI---MKML-PSGVYHY 143
+S E +W G K V +TG++D+W PL + K +F I +K+ + +
Sbjct: 1 MSSELMFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLXNKDDTFQF 60
Query: 144 RFIVD 148
+FIVD
Sbjct: 61 KFIVD 65
>sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana
GN=SNF4 PE=1 SV=1
Length = 487
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 100 TWSLGGKQVAVTGSWDNWEN---VDPLWRLGKDFVIMKMLPSGVYHYRFIVDECLRYAPD 156
W GG++V ++GS+ W + PL F ++ L G + Y+F VD R+
Sbjct: 26 VWPYGGRRVFLSGSFTRWTEHVPMSPLEGCPTVFQVICNLTPGYHQYKFFVDGEWRHDEH 85
Query: 157 VPWECDDSGNAYNVL 171
P+ + G +
Sbjct: 86 QPFVSGNGGVVNTIF 100
>sp|B3LFN4|SIP1_YEAS1 SNF1 protein kinase subunit beta-1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SIP1 PE=3 SV=2
Length = 815
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 112 GSWDNWENVDPLWRLGKD------FVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSG 165
S D+ + ++P R+ D FV LP+G+Y +F ++ L ++ +P D G
Sbjct: 493 ASLDSEKQLNPRIRMVYDDVHKEWFVPDLFLPAGIYRLQFSINGILTHSNFLPTATDSEG 552
Query: 166 NAYN 169
N N
Sbjct: 553 NFVN 556
>sp|A6ZZ19|SIP1_YEAS7 SNF1 protein kinase subunit beta-1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=SIP1 PE=3 SV=2
Length = 815
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 112 GSWDNWENVDPLWRLGKD------FVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSG 165
S D+ + ++P R+ D FV LP+G+Y +F ++ L ++ +P D G
Sbjct: 493 ASLDSEKQLNPRIRMVYDDVHKEWFVPDLFLPAGIYRLQFSINGILTHSNFLPTATDSEG 552
Query: 166 NAYN 169
N N
Sbjct: 553 NFVN 556
>sp|P32578|SIP1_YEAST SNF1 protein kinase subunit beta-1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP1 PE=1 SV=2
Length = 815
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 112 GSWDNWENVDPLWRLGKD------FVIMKMLPSGVYHYRFIVDECLRYAPDVPWECDDSG 165
S D+ + ++P R+ D FV LP+G+Y +F ++ L ++ +P D G
Sbjct: 493 ASLDSEKQLNPRIRMVYDDVHKEWFVPDLFLPAGIYRLQFSINGILTHSNFLPTATDSEG 552
Query: 166 NAYN 169
N N
Sbjct: 553 NFVN 556
>sp|C6E5H7|G6PI_GEOSM Glucose-6-phosphate isomerase OS=Geobacter sp. (strain M21) GN=pgi
PE=3 SV=1
Length = 530
Score = 31.6 bits (70), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 59 QVPMDPLPRSGDLMQVRNHAAERSMAYYEELSYEKQVAAAITWSLGGKQVAVTGSWDNWE 118
Q + + +SG + RN E A+ + A A+T S G ++ T SW++W
Sbjct: 169 QTLVVVISKSGGTKETRNGMLEARRAFERAGLHFAAHAVAVTGS--GSELDGTASWESWL 226
Query: 119 NVDPLW 124
V P+W
Sbjct: 227 GVFPMW 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,366,342
Number of Sequences: 539616
Number of extensions: 5284684
Number of successful extensions: 15311
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 15007
Number of HSP's gapped (non-prelim): 318
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)