Query 023599
Match_columns 280
No_of_seqs 185 out of 1903
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 05:14:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023599.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023599hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 2.7E-46 5.8E-51 336.7 24.0 222 42-278 28-251 (393)
2 PRK09257 aromatic amino acid a 100.0 7.5E-45 1.6E-49 329.9 28.4 259 18-277 2-260 (396)
3 PTZ00376 aspartate aminotransf 100.0 1.1E-44 2.3E-49 329.6 27.2 261 16-277 3-265 (404)
4 PLN02397 aspartate transaminas 100.0 3.7E-43 8.1E-48 320.8 29.6 261 16-277 22-283 (423)
5 KOG0257 Kynurenine aminotransf 100.0 1E-44 2.3E-49 313.7 17.9 220 47-280 36-262 (420)
6 PLN02368 alanine transaminase 100.0 2.6E-42 5.6E-47 312.6 24.2 249 24-277 21-306 (407)
7 PLN00143 tyrosine/nicotianamin 100.0 1.5E-41 3.2E-46 309.3 24.8 240 28-278 18-257 (409)
8 PLN00175 aminotransferase fami 100.0 1.6E-41 3.6E-46 309.2 24.9 255 5-279 20-275 (413)
9 PRK07366 succinyldiaminopimela 100.0 1.3E-41 2.7E-46 308.0 23.3 226 40-278 28-254 (388)
10 PLN02187 rooty/superroot1 100.0 2.8E-41 6.1E-46 311.1 24.7 229 39-278 63-291 (462)
11 PRK13355 bifunctional HTH-doma 100.0 4.6E-41 9.9E-46 314.3 24.6 247 17-278 119-368 (517)
12 COG1448 TyrB Aspartate/tyrosin 100.0 8.6E-41 1.9E-45 286.8 23.9 262 17-279 1-262 (396)
13 PLN00145 tyrosine/nicotianamin 100.0 9.5E-41 2.1E-45 305.4 25.2 227 41-278 51-277 (430)
14 PTZ00377 alanine aminotransfer 100.0 1.9E-40 4.2E-45 307.7 24.6 234 40-277 44-314 (481)
15 PRK08636 aspartate aminotransf 100.0 1.9E-40 4.1E-45 301.7 23.0 228 40-278 31-263 (403)
16 PRK06348 aspartate aminotransf 100.0 3E-40 6.5E-45 298.6 23.3 241 21-279 10-250 (384)
17 PRK07681 aspartate aminotransf 100.0 3.4E-40 7.4E-45 299.7 23.1 247 17-278 5-254 (399)
18 PRK09147 succinyldiaminopimela 100.0 4.3E-40 9.4E-45 298.7 23.1 225 40-279 27-261 (396)
19 PLN02656 tyrosine transaminase 100.0 9E-40 2E-44 297.7 25.2 240 27-278 15-256 (409)
20 PRK06207 aspartate aminotransf 100.0 4E-40 8.7E-45 299.5 22.3 224 42-278 39-266 (405)
21 PLN02231 alanine transaminase 100.0 1.3E-39 2.8E-44 303.5 25.1 229 40-278 127-367 (534)
22 PRK09276 LL-diaminopimelate am 100.0 1.1E-39 2.3E-44 295.2 23.4 225 40-278 29-254 (385)
23 PRK06855 aminotransferase; Val 100.0 1.5E-39 3.3E-44 298.0 24.4 228 40-278 30-258 (433)
24 PRK08068 transaminase; Reviewe 100.0 1.1E-39 2.5E-44 295.3 23.0 224 41-278 31-255 (389)
25 PRK05942 aspartate aminotransf 100.0 1E-39 2.2E-44 296.0 22.6 225 40-278 33-258 (394)
26 TIGR03540 DapC_direct LL-diami 100.0 2.8E-39 6E-44 292.2 23.1 225 40-278 27-252 (383)
27 PRK06290 aspartate aminotransf 100.0 4E-39 8.8E-44 293.0 22.9 224 40-279 42-267 (410)
28 KOG0259 Tyrosine aminotransfer 100.0 5.3E-39 1.2E-43 274.1 22.0 227 42-279 61-287 (447)
29 PRK09148 aminotransferase; Val 100.0 5.6E-39 1.2E-43 292.1 22.9 225 40-278 28-253 (405)
30 TIGR01264 tyr_amTase_E tyrosin 100.0 8.3E-39 1.8E-43 290.8 23.9 239 28-278 15-255 (401)
31 PTZ00433 tyrosine aminotransfe 100.0 1.1E-38 2.4E-43 290.8 24.3 239 28-277 18-263 (412)
32 PRK08912 hypothetical protein; 100.0 9.3E-39 2E-43 289.2 23.0 222 42-279 26-248 (387)
33 PRK12414 putative aminotransfe 100.0 7.8E-39 1.7E-43 289.3 22.4 242 19-279 9-251 (384)
34 TIGR03538 DapC_gpp succinyldia 100.0 1.5E-38 3.3E-43 288.3 24.2 225 40-279 26-260 (393)
35 PRK08960 hypothetical protein; 100.0 1.6E-38 3.4E-43 287.7 23.4 237 24-279 12-250 (387)
36 COG1167 ARO8 Transcriptional r 100.0 1.2E-38 2.5E-43 293.0 20.7 224 42-279 89-314 (459)
37 PRK07590 L,L-diaminopimelate a 100.0 1.3E-38 2.8E-43 290.1 20.6 220 41-279 33-265 (409)
38 PRK09265 aminotransferase AlaT 100.0 9.6E-38 2.1E-42 284.0 25.1 235 29-278 21-255 (404)
39 TIGR01265 tyr_nico_aTase tyros 100.0 1.2E-37 2.6E-42 283.3 24.6 241 27-278 14-256 (403)
40 PRK07683 aminotransferase A; V 100.0 7.4E-38 1.6E-42 283.2 23.1 240 21-279 9-249 (387)
41 PRK07682 hypothetical protein; 100.0 7.6E-38 1.6E-42 282.4 22.1 221 42-278 20-241 (378)
42 PLN02450 1-aminocyclopropane-1 100.0 4.5E-38 9.7E-43 290.3 21.0 226 42-278 38-287 (468)
43 PRK07309 aromatic amino acid a 100.0 1.9E-37 4.2E-42 280.9 24.8 243 19-278 9-252 (391)
44 PRK07337 aminotransferase; Val 100.0 1E-37 2.2E-42 282.5 22.5 221 40-279 28-248 (388)
45 PLN02376 1-aminocyclopropane-1 100.0 1.3E-37 2.8E-42 288.5 23.3 246 24-278 22-294 (496)
46 PRK05957 aspartate aminotransf 100.0 1.7E-37 3.6E-42 281.1 23.6 221 42-278 27-248 (389)
47 PRK08637 hypothetical protein; 100.0 2.5E-37 5.4E-42 279.9 24.0 228 42-278 3-242 (388)
48 PRK07550 hypothetical protein; 100.0 2.5E-37 5.3E-42 279.8 23.7 226 40-279 27-252 (386)
49 PRK05839 hypothetical protein; 100.0 2E-37 4.4E-42 279.2 21.9 230 29-278 11-247 (374)
50 PRK06108 aspartate aminotransf 100.0 3E-37 6.4E-42 278.8 23.0 224 42-279 24-248 (382)
51 PRK09082 methionine aminotrans 100.0 2E-37 4.2E-42 280.4 21.6 221 42-278 30-251 (386)
52 PRK07777 aminotransferase; Val 100.0 4.4E-37 9.6E-42 278.2 23.1 241 21-279 6-248 (387)
53 PRK07324 transaminase; Validat 100.0 1.5E-37 3.2E-42 279.9 19.4 213 41-278 25-237 (373)
54 PRK06107 aspartate aminotransf 100.0 6.1E-37 1.3E-41 278.6 22.9 224 40-278 31-256 (402)
55 PRK08175 aminotransferase; Val 100.0 6.6E-37 1.4E-41 277.8 22.3 225 40-278 27-252 (395)
56 PRK08363 alanine aminotransfer 100.0 8.9E-37 1.9E-41 277.2 22.4 223 40-277 28-251 (398)
57 PRK08361 aspartate aminotransf 100.0 9.1E-37 2E-41 276.5 21.7 221 42-279 33-253 (391)
58 TIGR03537 DapC succinyldiamino 100.0 1.3E-36 2.8E-41 271.7 21.2 216 44-278 2-221 (350)
59 PLN02607 1-aminocyclopropane-1 100.0 1.3E-36 2.7E-41 278.8 21.5 226 42-278 47-294 (447)
60 PRK07568 aspartate aminotransf 100.0 3.5E-36 7.6E-41 273.2 23.6 221 41-278 29-250 (397)
61 PRK05764 aspartate aminotransf 100.0 2.9E-36 6.2E-41 273.4 22.7 248 15-278 2-253 (393)
62 PRK02610 histidinol-phosphate 100.0 1.9E-36 4.1E-41 272.8 21.3 217 42-278 28-249 (374)
63 COG1168 MalY Bifunctional PLP- 100.0 2.6E-36 5.7E-41 259.1 20.8 223 41-279 24-248 (388)
64 PF00155 Aminotran_1_2: Aminot 100.0 6.2E-37 1.3E-41 274.8 17.7 229 43-278 2-236 (363)
65 PRK01533 histidinol-phosphate 100.0 7.5E-37 1.6E-41 274.4 17.3 210 41-278 28-237 (366)
66 TIGR03542 DAPAT_plant LL-diami 100.0 3.1E-36 6.6E-41 274.0 20.4 219 40-279 31-262 (402)
67 PRK06836 aspartate aminotransf 100.0 9.5E-36 2.1E-40 270.1 22.9 222 41-279 32-260 (394)
68 PRK09275 aspartate aminotransf 100.0 1.7E-36 3.7E-41 279.7 18.0 214 43-279 101-327 (527)
69 PRK06358 threonine-phosphate d 100.0 9.8E-36 2.1E-40 266.3 22.3 224 27-278 5-228 (354)
70 PRK14809 histidinol-phosphate 100.0 1.8E-35 4E-40 264.9 22.4 223 27-279 16-238 (357)
71 PRK03317 histidinol-phosphate 100.0 1.5E-35 3.2E-40 266.6 19.1 217 43-278 27-243 (368)
72 PRK15481 transcriptional regul 100.0 1E-35 2.2E-40 272.8 18.2 211 42-278 85-296 (431)
73 KOG1411 Aspartate aminotransfe 100.0 3.8E-35 8.3E-40 247.5 19.7 263 15-278 25-288 (427)
74 PRK07865 N-succinyldiaminopime 100.0 3.7E-35 8E-40 263.6 19.8 234 15-278 1-238 (364)
75 TIGR03801 asp_4_decarbox aspar 100.0 2.3E-35 5.1E-40 271.8 18.3 213 43-278 95-325 (521)
76 PRK08056 threonine-phosphate d 100.0 2.1E-34 4.6E-39 258.0 22.2 224 25-278 4-227 (356)
77 PRK03158 histidinol-phosphate 100.0 8.6E-35 1.9E-39 260.8 19.3 209 42-278 29-237 (359)
78 KOG1412 Aspartate aminotransfe 100.0 5.1E-34 1.1E-38 237.8 22.0 266 14-279 2-269 (410)
79 PRK05166 histidinol-phosphate 100.0 1.6E-34 3.4E-39 260.2 20.6 211 41-278 35-246 (371)
80 PLN03026 histidinol-phosphate 100.0 1.8E-34 3.8E-39 260.4 20.5 216 28-278 39-255 (380)
81 PRK09105 putative aminotransfe 100.0 2.3E-34 4.9E-39 258.8 19.0 206 42-278 43-248 (370)
82 PRK09440 avtA valine--pyruvate 100.0 2.2E-34 4.9E-39 262.9 18.3 219 41-278 29-263 (416)
83 COG0079 HisC Histidinol-phosph 100.0 4.9E-34 1.1E-38 253.3 18.9 205 43-278 23-227 (356)
84 PLN02672 methionine S-methyltr 100.0 6.7E-34 1.4E-38 277.3 20.7 222 40-278 695-925 (1082)
85 TIGR03539 DapC_actino succinyl 100.0 6.1E-34 1.3E-38 255.1 18.5 221 28-278 8-232 (357)
86 PRK07392 threonine-phosphate d 100.0 3.5E-33 7.5E-38 250.5 22.1 210 40-279 20-232 (360)
87 PRK04870 histidinol-phosphate 100.0 2.1E-33 4.6E-38 251.5 18.7 208 41-278 25-232 (356)
88 PRK03967 histidinol-phosphate 100.0 3.2E-33 6.9E-38 248.5 19.7 202 42-278 18-219 (337)
89 PRK08153 histidinol-phosphate 100.0 2.1E-33 4.5E-38 252.7 18.5 208 42-279 32-239 (369)
90 PRK05387 histidinol-phosphate 100.0 2.4E-33 5.2E-38 250.8 18.2 202 42-278 24-225 (353)
91 PRK14808 histidinol-phosphate 100.0 5.1E-33 1.1E-37 246.9 19.2 202 40-279 17-218 (335)
92 PRK03321 putative aminotransfe 100.0 1.6E-33 3.4E-38 251.9 15.5 210 42-278 22-231 (352)
93 PRK08354 putative aminotransfe 100.0 1.2E-32 2.6E-37 242.2 20.1 190 41-277 7-196 (311)
94 PRK14807 histidinol-phosphate 100.0 1.6E-32 3.5E-37 245.3 21.1 207 42-279 22-229 (351)
95 PRK06425 histidinol-phosphate 100.0 8.2E-33 1.8E-37 245.4 18.1 173 83-279 37-209 (332)
96 PRK06225 aspartate aminotransf 100.0 2.1E-32 4.6E-37 247.1 20.9 214 40-278 26-240 (380)
97 PRK05664 threonine-phosphate d 100.0 3.7E-32 8E-37 241.0 18.0 189 42-279 20-208 (330)
98 PRK01688 histidinol-phosphate 100.0 1.2E-32 2.6E-37 246.1 15.0 199 43-278 29-228 (351)
99 PRK02731 histidinol-phosphate 100.0 9.8E-32 2.1E-36 241.6 20.5 221 27-278 20-240 (367)
100 PRK04781 histidinol-phosphate 100.0 6.5E-32 1.4E-36 242.5 16.5 180 80-278 54-235 (364)
101 PRK04635 histidinol-phosphate 100.0 5E-32 1.1E-36 242.5 15.5 198 42-278 31-229 (354)
102 TIGR01141 hisC histidinol-phos 100.0 2.1E-31 4.6E-36 237.6 17.4 207 42-278 19-225 (346)
103 PRK07908 hypothetical protein; 100.0 7.2E-31 1.6E-35 234.5 20.4 200 40-278 20-219 (349)
104 PRK06959 putative threonine-ph 100.0 5E-31 1.1E-35 234.5 17.7 210 21-278 4-213 (339)
105 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1E-30 2.2E-35 231.8 18.5 210 25-279 1-210 (330)
106 PRK00950 histidinol-phosphate 100.0 4.1E-30 9E-35 230.5 21.0 219 27-278 20-238 (361)
107 KOG0256 1-aminocyclopropane-1- 100.0 1.2E-29 2.7E-34 218.7 17.1 193 79-276 114-316 (471)
108 KOG0634 Aromatic amino acid am 100.0 7.8E-29 1.7E-33 215.3 16.3 242 27-278 22-309 (472)
109 KOG0258 Alanine aminotransfera 100.0 2.1E-27 4.6E-32 203.6 18.9 216 60-279 87-313 (475)
110 PRK13238 tnaA tryptophanase/L- 99.9 4.4E-26 9.5E-31 209.4 21.5 230 21-273 16-262 (460)
111 cd00609 AAT_like Aspartate ami 99.9 6E-25 1.3E-29 195.3 19.6 218 45-279 1-220 (350)
112 cd00617 Tnase_like Tryptophana 99.9 7.6E-23 1.7E-27 185.8 17.7 217 40-278 9-248 (431)
113 COG3977 Alanine-alpha-ketoisov 99.9 5.8E-23 1.3E-27 171.2 15.0 235 29-278 16-263 (417)
114 PRK07049 methionine gamma-lyas 99.9 3.2E-22 7E-27 182.6 17.9 170 81-278 78-257 (427)
115 TIGR01822 2am3keto_CoA 2-amino 99.9 1.4E-21 2.9E-26 177.3 20.3 207 40-278 36-253 (393)
116 PRK06939 2-amino-3-ketobutyrat 99.9 8.5E-22 1.8E-26 178.7 18.9 215 40-279 40-258 (397)
117 TIGR00858 bioF 8-amino-7-oxono 99.9 2.1E-21 4.6E-26 173.7 20.9 210 40-278 14-229 (360)
118 KOG0633 Histidinol phosphate a 99.9 1.6E-23 3.5E-28 171.4 6.3 171 88-278 71-242 (375)
119 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.5E-21 5.4E-26 175.1 19.7 214 40-278 31-245 (385)
120 PRK06234 methionine gamma-lyas 99.9 1.5E-21 3.2E-26 177.2 18.2 164 80-278 58-228 (400)
121 PLN02242 methionine gamma-lyas 99.9 1.9E-21 4.1E-26 177.0 15.1 160 84-278 74-239 (418)
122 TIGR03392 FeS_syn_CsdA cystein 99.9 3E-20 6.5E-25 168.9 19.5 163 88-278 62-232 (398)
123 PRK05958 8-amino-7-oxononanoat 99.9 5.2E-20 1.1E-24 166.3 20.9 210 40-278 37-251 (385)
124 cd06502 TA_like Low-specificit 99.8 3.3E-20 7.1E-25 164.8 16.4 173 81-277 27-207 (338)
125 PRK10534 L-threonine aldolase; 99.8 1.8E-20 3.8E-25 166.4 13.5 200 45-277 2-209 (333)
126 PLN02721 threonine aldolase 99.8 6.8E-20 1.5E-24 163.7 17.3 204 43-277 6-219 (353)
127 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 8.9E-20 1.9E-24 163.7 16.3 165 88-278 46-215 (361)
128 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 8E-20 1.7E-24 166.8 15.9 162 82-278 53-218 (418)
129 PRK07504 O-succinylhomoserine 99.8 8.3E-20 1.8E-24 165.6 15.7 161 83-278 62-226 (398)
130 PRK08133 O-succinylhomoserine 99.8 1.1E-19 2.3E-24 164.5 16.2 158 86-278 61-222 (390)
131 TIGR02080 O_succ_thio_ly O-suc 99.8 1.7E-19 3.7E-24 162.6 16.4 163 81-278 46-213 (382)
132 PRK10874 cysteine sulfinate de 99.8 3.8E-19 8.3E-24 161.8 18.9 163 88-278 65-235 (401)
133 cd06454 KBL_like KBL_like; thi 99.8 3.4E-19 7.3E-24 158.9 18.1 164 88-278 48-214 (349)
134 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 2.6E-19 5.6E-24 161.2 17.2 167 88-279 53-223 (370)
135 PRK09295 bifunctional cysteine 99.8 4.3E-19 9.4E-24 161.7 18.6 166 88-279 69-240 (406)
136 PRK08249 cystathionine gamma-s 99.8 2E-19 4.4E-24 162.9 15.9 160 83-277 61-224 (398)
137 PRK07811 cystathionine gamma-s 99.8 2.6E-19 5.7E-24 161.9 15.9 162 82-278 57-223 (388)
138 PRK07503 methionine gamma-lyas 99.8 3E-19 6.5E-24 162.2 16.3 159 84-277 63-226 (403)
139 PRK08045 cystathionine gamma-s 99.8 3.2E-19 6.9E-24 161.0 16.0 164 80-278 46-214 (386)
140 PRK02627 acetylornithine amino 99.8 7.6E-19 1.6E-23 159.5 17.8 214 40-279 37-266 (396)
141 PRK08776 cystathionine gamma-s 99.8 2.9E-19 6.4E-24 162.1 15.0 157 87-278 61-222 (405)
142 TIGR01328 met_gam_lyase methio 99.8 6.6E-19 1.4E-23 159.4 16.9 160 84-278 57-220 (391)
143 TIGR01976 am_tr_V_VC1184 cyste 99.8 9.5E-19 2.1E-23 158.9 17.8 164 88-278 62-230 (397)
144 TIGR00707 argD acetylornithine 99.8 1.7E-18 3.8E-23 156.2 19.3 217 40-278 25-253 (379)
145 TIGR01979 sufS cysteine desulf 99.8 2.3E-18 4.9E-23 156.8 19.2 166 87-278 63-234 (403)
146 PRK06767 methionine gamma-lyas 99.8 9.3E-19 2E-23 158.3 16.5 161 83-278 58-223 (386)
147 PRK05939 hypothetical protein; 99.8 1.3E-18 2.9E-23 157.5 17.3 157 86-278 44-207 (397)
148 PLN02483 serine palmitoyltrans 99.8 1E-18 2.2E-23 162.2 16.6 212 41-278 99-323 (489)
149 PRK08247 cystathionine gamma-s 99.8 1.7E-18 3.8E-23 155.5 17.0 163 80-278 46-213 (366)
150 PLN02822 serine palmitoyltrans 99.8 1.2E-18 2.5E-23 161.6 16.1 208 40-278 107-328 (481)
151 PRK06460 hypothetical protein; 99.8 9E-19 2E-23 157.8 14.5 161 83-278 42-207 (376)
152 PRK08861 cystathionine gamma-s 99.8 1.4E-18 2.9E-23 156.7 15.6 164 80-278 47-215 (388)
153 PRK02948 cysteine desulfurase; 99.8 1.9E-18 4.2E-23 156.2 16.6 162 88-278 45-213 (381)
154 cd00613 GDC-P Glycine cleavage 99.8 2E-18 4.4E-23 156.8 16.8 203 43-278 21-239 (398)
155 PF12897 Aminotran_MocR: Alani 99.8 3.2E-18 6.9E-23 148.3 16.8 187 79-279 61-269 (425)
156 PRK08248 O-acetylhomoserine am 99.8 2.9E-18 6.3E-23 156.7 17.4 159 85-278 63-225 (431)
157 PLN02855 Bifunctional selenocy 99.8 5.7E-18 1.2E-22 155.2 19.4 166 88-279 78-249 (424)
158 cd06453 SufS_like Cysteine des 99.8 3.7E-18 8.1E-23 153.7 17.7 163 88-278 45-214 (373)
159 TIGR03576 pyridox_MJ0158 pyrid 99.8 5E-18 1.1E-22 151.2 18.1 160 88-279 56-218 (346)
160 PRK06084 O-acetylhomoserine am 99.8 4.5E-18 9.7E-23 155.3 17.4 159 85-278 57-219 (425)
161 PRK07179 hypothetical protein; 99.8 1.1E-17 2.5E-22 152.4 19.7 209 41-278 53-263 (407)
162 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 1.5E-17 3.2E-22 150.7 19.7 168 86-278 63-234 (387)
163 PRK07050 cystathionine beta-ly 99.8 5.7E-18 1.2E-22 153.3 16.9 162 82-278 61-227 (394)
164 cd06451 AGAT_like Alanine-glyo 99.8 5.5E-18 1.2E-22 151.7 16.4 164 88-278 34-200 (356)
165 TIGR01325 O_suc_HS_sulf O-succ 99.8 4.9E-18 1.1E-22 153.3 16.2 159 84-277 52-214 (380)
166 PRK07810 O-succinylhomoserine 99.8 3.8E-18 8.2E-23 154.9 14.9 160 83-277 67-231 (403)
167 PLN02409 serine--glyoxylate am 99.8 7E-18 1.5E-22 153.5 16.7 176 86-279 38-216 (401)
168 PRK08574 cystathionine gamma-s 99.8 6.4E-18 1.4E-22 152.6 16.2 159 83-277 50-213 (385)
169 cd00378 SHMT Serine-glycine hy 99.8 4.2E-18 9.1E-23 155.0 15.0 207 42-279 19-238 (402)
170 PRK07582 cystathionine gamma-l 99.8 3.7E-18 8.1E-23 153.3 14.3 160 80-278 45-209 (366)
171 TIGR01437 selA_rel uncharacter 99.8 3.2E-17 7E-22 147.1 20.1 196 42-278 8-222 (363)
172 TIGR03403 nifS_epsilon cystein 99.8 6.5E-18 1.4E-22 152.8 15.7 198 54-277 4-214 (382)
173 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.7E-17 3.8E-22 149.4 18.1 143 110-278 47-195 (376)
174 PRK13392 5-aminolevulinate syn 99.8 1.4E-17 3E-22 152.0 17.4 206 42-278 46-260 (410)
175 cd00614 CGS_like CGS_like: Cys 99.8 9.3E-18 2E-22 151.0 16.0 160 84-278 38-202 (369)
176 cd00615 Orn_deC_like Ornithine 99.8 3.8E-18 8.3E-23 149.0 13.0 172 82-276 55-231 (294)
177 PRK13479 2-aminoethylphosphona 99.8 1.3E-17 2.7E-22 150.1 16.5 167 87-278 38-207 (368)
178 cd06450 DOPA_deC_like DOPA dec 99.8 5.8E-18 1.3E-22 150.8 14.2 200 61-276 11-228 (345)
179 PRK03244 argD acetylornithine 99.8 1.1E-17 2.3E-22 152.2 15.7 212 40-279 41-267 (398)
180 TIGR01977 am_tr_V_EF2568 cyste 99.8 3.5E-17 7.6E-22 147.5 18.9 166 86-278 44-213 (376)
181 PRK01278 argD acetylornithine 99.8 2.6E-17 5.7E-22 149.2 17.7 218 40-279 29-259 (389)
182 PRK11658 UDP-4-amino-4-deoxy-L 99.8 3E-17 6.4E-22 148.2 17.9 161 86-278 33-195 (379)
183 cd01494 AAT_I Aspartate aminot 99.8 3.9E-17 8.6E-22 130.0 15.6 167 88-277 2-169 (170)
184 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 4.2E-17 9.2E-22 145.6 17.6 194 56-278 5-201 (355)
185 cd00610 OAT_like Acetyl ornith 99.8 5.6E-17 1.2E-21 148.0 18.5 222 40-278 34-274 (413)
186 PRK06702 O-acetylhomoserine am 99.8 2.3E-17 5.1E-22 150.0 15.5 152 87-272 62-222 (432)
187 PRK14012 cysteine desulfurase; 99.8 6.9E-17 1.5E-21 147.2 18.5 163 88-279 51-220 (404)
188 PRK09028 cystathionine beta-ly 99.7 2.7E-17 6E-22 148.2 15.1 162 80-276 53-221 (394)
189 TIGR00713 hemL glutamate-1-sem 99.7 1.7E-16 3.6E-21 145.5 17.6 217 40-278 46-277 (423)
190 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 2E-16 4.3E-21 142.8 17.2 159 89-277 30-194 (375)
191 TIGR01329 cysta_beta_ly_E cyst 99.7 2.2E-16 4.7E-21 142.4 16.4 155 88-278 49-208 (378)
192 PRK07671 cystathionine beta-ly 99.7 2.2E-16 4.9E-21 142.2 16.4 157 85-277 49-210 (377)
193 TIGR01324 cysta_beta_ly_B cyst 99.7 2.3E-16 5E-21 141.9 16.4 162 80-277 42-211 (377)
194 PRK05967 cystathionine beta-ly 99.7 2.2E-16 4.8E-21 142.2 16.2 135 117-276 85-224 (395)
195 PRK00451 glycine dehydrogenase 99.7 1.6E-16 3.4E-21 146.7 15.5 146 109-278 129-283 (447)
196 TIGR03235 DNA_S_dndA cysteine 99.7 2.5E-16 5.4E-21 141.0 16.1 163 88-279 44-214 (353)
197 TIGR02326 transamin_PhnW 2-ami 99.7 4.1E-16 8.9E-21 140.1 17.4 166 88-278 37-205 (363)
198 PRK07269 cystathionine gamma-s 99.7 2.8E-16 6E-21 140.9 15.9 164 80-277 48-212 (364)
199 PRK06176 cystathionine gamma-s 99.7 2.3E-16 5E-21 142.3 15.4 155 87-277 51-209 (380)
200 PRK08064 cystathionine beta-ly 99.7 2.8E-16 6.1E-21 142.3 15.9 154 88-277 56-214 (390)
201 PRK05994 O-acetylhomoserine am 99.7 3.9E-16 8.4E-21 142.8 16.4 156 87-277 64-223 (427)
202 PRK09064 5-aminolevulinate syn 99.7 1.2E-15 2.5E-20 139.2 19.2 206 42-278 46-260 (407)
203 TIGR03402 FeS_nifS cysteine de 99.7 7.7E-16 1.7E-20 139.1 17.8 162 88-278 44-211 (379)
204 TIGR02006 IscS cysteine desulf 99.7 7.6E-16 1.6E-20 140.2 17.5 163 87-278 48-217 (402)
205 PLN02509 cystathionine beta-ly 99.7 6.2E-16 1.3E-20 141.9 16.6 164 80-277 125-293 (464)
206 PRK05968 hypothetical protein; 99.7 8.4E-16 1.8E-20 139.1 17.2 156 87-278 64-224 (389)
207 TIGR03588 PseC UDP-4-keto-6-de 99.7 1.7E-15 3.6E-20 137.0 18.3 187 60-277 8-197 (380)
208 PRK02936 argD acetylornithine 99.7 6E-15 1.3E-19 133.2 20.3 216 40-278 27-250 (377)
209 TIGR01821 5aminolev_synth 5-am 99.7 3.3E-15 7.1E-20 136.1 18.6 206 42-278 45-259 (402)
210 PRK13520 L-tyrosine decarboxyl 99.7 3.2E-15 7E-20 134.5 18.1 169 89-278 62-234 (371)
211 TIGR03812 tyr_de_CO2_Arch tyro 99.7 4.8E-15 1E-19 133.5 17.8 169 89-278 62-239 (373)
212 PLN03227 serine palmitoyltrans 99.7 5.8E-15 1.3E-19 133.8 17.6 173 82-278 39-222 (392)
213 PRK05093 argD bifunctional N-s 99.7 5.1E-15 1.1E-19 134.8 17.3 150 110-279 98-268 (403)
214 PRK00011 glyA serine hydroxyme 99.7 2.6E-15 5.7E-20 137.3 15.2 142 117-278 93-241 (416)
215 PRK07505 hypothetical protein; 99.6 1.2E-14 2.5E-19 132.4 19.0 207 40-277 44-262 (402)
216 PRK04073 rocD ornithine--oxo-a 99.6 1.2E-14 2.5E-19 132.2 18.0 151 110-278 98-270 (396)
217 PRK08134 O-acetylhomoserine am 99.6 7.4E-15 1.6E-19 134.3 16.5 156 87-277 65-224 (433)
218 PRK13393 5-aminolevulinate syn 99.6 3.5E-14 7.5E-19 129.5 20.4 206 42-277 45-258 (406)
219 PRK15407 lipopolysaccharide bi 99.6 2.3E-14 4.9E-19 131.5 19.0 200 44-278 25-234 (438)
220 TIGR03531 selenium_SpcS O-phos 99.6 1.8E-14 3.8E-19 131.2 17.8 153 111-278 125-286 (444)
221 PLN02651 cysteine desulfurase 99.6 1.2E-14 2.6E-19 130.6 16.6 162 88-278 45-213 (364)
222 PRK08088 4-aminobutyrate amino 99.6 3E-14 6.4E-19 130.6 18.7 223 40-278 39-282 (425)
223 PRK04366 glycine dehydrogenase 99.6 2.8E-14 6.1E-19 132.5 18.4 207 46-278 72-290 (481)
224 PRK00854 rocD ornithine--oxo-a 99.6 8.3E-14 1.8E-18 126.8 19.2 212 40-279 39-272 (401)
225 cd00616 AHBA_syn 3-amino-5-hyd 99.6 4.1E-14 8.8E-19 126.4 16.6 164 83-278 15-181 (352)
226 PRK07812 O-acetylhomoserine am 99.6 3E-14 6.5E-19 130.3 15.7 158 87-278 70-231 (436)
227 PRK12381 bifunctional succinyl 99.6 2.1E-13 4.6E-18 124.3 19.7 217 40-279 37-267 (406)
228 PRK05937 8-amino-7-oxononanoat 99.6 1.2E-13 2.6E-18 124.5 17.8 207 42-272 4-221 (370)
229 PRK04260 acetylornithine amino 99.6 5.7E-13 1.2E-17 120.3 20.4 212 40-279 27-249 (375)
230 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 7.4E-14 1.6E-18 125.5 14.4 154 89-277 58-216 (386)
231 PRK08114 cystathionine beta-ly 99.5 1.9E-13 4.1E-18 123.1 15.3 154 87-275 63-223 (395)
232 COG0626 MetC Cystathionine bet 99.5 4E-13 8.7E-18 119.8 16.4 158 85-277 62-224 (396)
233 PTZ00125 ornithine aminotransf 99.5 1.5E-12 3.2E-17 118.5 20.6 159 110-279 89-263 (400)
234 KOG1549 Cysteine desulfurase N 99.5 9E-13 2E-17 116.7 17.6 207 41-279 41-257 (428)
235 PRK05613 O-acetylhomoserine am 99.5 5.9E-13 1.3E-17 121.8 16.1 156 88-277 71-230 (437)
236 COG0520 csdA Selenocysteine ly 99.5 1.1E-12 2.5E-17 118.7 17.5 163 87-277 67-237 (405)
237 COG2873 MET17 O-acetylhomoseri 99.5 7.8E-13 1.7E-17 114.2 14.9 158 85-277 61-222 (426)
238 PF01041 DegT_DnrJ_EryC1: DegT 99.5 1E-12 2.3E-17 118.1 15.0 159 87-277 26-187 (363)
239 PLN02955 8-amino-7-oxononanoat 99.5 1.1E-11 2.4E-16 113.2 21.4 207 42-278 102-331 (476)
240 PRK09792 4-aminobutyrate trans 99.5 8.3E-12 1.8E-16 114.3 20.8 159 110-278 102-281 (421)
241 COG0399 WecE Predicted pyridox 99.5 4.5E-12 9.8E-17 112.4 17.3 128 87-236 35-163 (374)
242 PRK00062 glutamate-1-semialdeh 99.5 4.9E-12 1.1E-16 116.0 18.1 212 40-278 48-279 (426)
243 PLN00144 acetylornithine trans 99.4 7.1E-12 1.5E-16 113.3 18.1 217 40-279 13-251 (382)
244 TIGR03246 arg_catab_astC succi 99.4 1.3E-11 2.9E-16 112.2 19.6 211 40-279 33-263 (397)
245 PRK08360 4-aminobutyrate amino 99.4 2.1E-11 4.6E-16 112.1 20.6 223 40-278 39-287 (443)
246 PRK04612 argD acetylornithine 99.4 2E-11 4.3E-16 111.2 19.2 219 40-279 38-271 (408)
247 KOG0053 Cystathionine beta-lya 99.4 5.9E-12 1.3E-16 111.3 15.1 156 87-277 78-237 (409)
248 PRK04311 selenocysteine syntha 99.4 4E-11 8.7E-16 110.3 21.0 211 42-278 79-306 (464)
249 PF00266 Aminotran_5: Aminotra 99.4 2E-11 4.3E-16 110.0 18.4 164 88-279 45-215 (371)
250 TIGR00700 GABAtrnsam 4-aminobu 99.4 3.3E-11 7.1E-16 110.4 19.7 223 40-279 31-281 (420)
251 PLN02624 ornithine-delta-amino 99.4 4.5E-11 9.7E-16 111.0 20.7 213 41-278 74-308 (474)
252 TIGR00474 selA seryl-tRNA(sec) 99.4 5.6E-11 1.2E-15 109.1 19.9 212 42-278 74-301 (454)
253 TIGR02618 tyr_phenol_ly tyrosi 99.4 1.9E-11 4.2E-16 110.4 16.4 178 81-277 66-264 (450)
254 TIGR01885 Orn_aminotrans ornit 99.4 8.9E-11 1.9E-15 107.0 21.1 214 40-278 35-270 (401)
255 PRK06918 4-aminobutyrate amino 99.4 6.5E-11 1.4E-15 109.4 19.3 159 110-278 116-302 (451)
256 PRK06777 4-aminobutyrate amino 99.3 1.6E-10 3.5E-15 105.8 20.5 159 110-278 102-281 (421)
257 PRK06434 cystathionine gamma-l 99.3 2.9E-11 6.3E-16 109.0 14.9 154 85-276 63-220 (384)
258 PF01212 Beta_elim_lyase: Beta 99.3 2.4E-11 5.3E-16 105.4 13.4 177 81-278 24-207 (290)
259 TIGR01814 kynureninase kynuren 99.3 1.3E-10 2.7E-15 106.1 17.7 144 108-269 85-240 (406)
260 COG1104 NifS Cysteine sulfinat 99.3 4.6E-11 9.9E-16 105.5 13.6 163 53-233 5-182 (386)
261 PRK07495 4-aminobutyrate amino 99.3 2.8E-10 6.1E-15 104.2 18.6 222 40-279 38-282 (425)
262 COG0156 BioF 7-keto-8-aminopel 99.3 8.3E-10 1.8E-14 98.8 19.6 203 41-269 38-248 (388)
263 PF06838 Met_gamma_lyase: Meth 99.3 1E-10 2.2E-15 101.4 13.0 161 87-270 55-228 (403)
264 PLN02994 1-aminocyclopropane-1 99.2 9.1E-11 2E-15 92.0 11.2 65 81-149 87-153 (153)
265 PRK02769 histidine decarboxyla 99.2 1E-09 2.3E-14 98.9 19.6 151 117-278 90-245 (380)
266 PRK13034 serine hydroxymethylt 99.2 3.7E-10 8E-15 103.3 15.7 163 88-277 72-243 (416)
267 PRK13237 tyrosine phenol-lyase 99.2 6.9E-10 1.5E-14 100.7 16.4 139 80-232 72-221 (460)
268 PRK08117 4-aminobutyrate amino 99.2 1.4E-09 3E-14 100.1 18.6 222 40-278 41-290 (433)
269 PLN02414 glycine dehydrogenase 99.2 9.3E-10 2E-14 108.7 16.6 165 89-278 571-748 (993)
270 COG0075 Serine-pyruvate aminot 99.1 2E-09 4.3E-14 95.7 16.1 137 117-270 62-201 (383)
271 PLN03032 serine decarboxylase; 99.1 1E-09 2.3E-14 98.4 14.3 176 88-278 64-248 (374)
272 TIGR02407 ectoine_ectB diamino 99.1 9.2E-09 2E-13 94.0 19.8 155 117-278 105-278 (412)
273 TIGR00709 dat 2,4-diaminobutyr 99.1 1.6E-08 3.4E-13 93.3 21.4 223 40-278 37-289 (442)
274 PRK05964 adenosylmethionine--8 99.1 4.7E-09 1E-13 96.3 17.6 224 40-278 40-284 (423)
275 COG2008 GLY1 Threonine aldolas 99.1 2.5E-09 5.5E-14 92.7 14.4 195 60-279 11-213 (342)
276 PRK09264 diaminobutyrate--2-ox 99.1 2.1E-08 4.7E-13 92.0 21.3 157 117-279 109-283 (425)
277 TIGR01788 Glu-decarb-GAD gluta 99.1 2.7E-09 5.9E-14 97.6 15.3 117 110-235 100-235 (431)
278 PF01276 OKR_DC_1: Orn/Lys/Arg 99.0 1.1E-09 2.3E-14 98.8 9.6 175 85-277 64-252 (417)
279 PRK03715 argD acetylornithine 99.0 3.8E-08 8.3E-13 89.5 19.8 217 40-278 34-262 (395)
280 PRK13580 serine hydroxymethylt 99.0 6.9E-09 1.5E-13 95.3 14.5 206 42-278 49-299 (493)
281 PLN02263 serine decarboxylase 99.0 9E-09 1.9E-13 94.2 15.2 139 87-236 130-277 (470)
282 PRK06058 4-aminobutyrate amino 99.0 5.6E-08 1.2E-12 89.7 20.3 221 40-278 54-302 (443)
283 PRK06541 hypothetical protein; 99.0 1.1E-07 2.4E-12 88.0 20.3 161 110-279 113-306 (460)
284 PRK08593 4-aminobutyrate amino 99.0 1.6E-07 3.5E-12 86.7 20.9 160 110-278 104-290 (445)
285 COG0076 GadB Glutamate decarbo 99.0 3.5E-08 7.5E-13 90.8 16.2 181 87-279 98-291 (460)
286 PRK15029 arginine decarboxylas 98.9 2E-08 4.4E-13 96.8 13.7 177 82-275 201-396 (755)
287 PTZ00094 serine hydroxymethylt 98.9 7.2E-08 1.6E-12 89.3 16.8 163 91-278 85-258 (452)
288 PLN02271 serine hydroxymethylt 98.9 9E-08 2E-12 88.7 16.8 145 115-278 218-374 (586)
289 PRK04013 argD acetylornithine/ 98.9 2E-07 4.4E-12 83.7 18.1 208 40-278 22-244 (364)
290 PRK05769 4-aminobutyrate amino 98.9 5.9E-07 1.3E-11 82.8 21.0 159 110-279 116-305 (441)
291 COG4100 Cystathionine beta-lya 98.9 7.8E-08 1.7E-12 81.4 13.3 158 87-266 66-236 (416)
292 PLN03226 serine hydroxymethylt 98.8 2.2E-07 4.9E-12 86.2 17.5 146 115-278 104-259 (475)
293 cd00611 PSAT_like Phosphoserin 98.8 6.5E-08 1.4E-12 86.8 12.9 154 88-277 46-205 (355)
294 PLN02590 probable tyrosine dec 98.8 1.4E-07 3.1E-12 88.4 14.5 149 80-236 160-331 (539)
295 PLN02880 tyrosine decarboxylas 98.8 3.5E-07 7.7E-12 85.3 16.5 183 82-278 114-321 (490)
296 KOG1368 Threonine aldolase [Am 98.8 2.7E-07 5.9E-12 78.0 14.0 166 43-231 22-197 (384)
297 PLN02482 glutamate-1-semialdeh 98.8 1.1E-06 2.5E-11 81.5 19.0 215 41-277 98-327 (474)
298 TIGR03372 putres_am_tran putre 98.7 1.7E-06 3.8E-11 79.6 19.9 153 110-278 135-308 (442)
299 PLN02724 Molybdenum cofactor s 98.7 5.4E-07 1.2E-11 89.0 17.4 172 88-278 80-276 (805)
300 COG4992 ArgD Ornithine/acetylo 98.7 8.5E-07 1.8E-11 78.7 16.6 210 40-277 40-266 (404)
301 PF00464 SHMT: Serine hydroxym 98.7 1.3E-07 2.8E-12 85.1 11.7 206 42-278 20-245 (399)
302 COG0112 GlyA Glycine/serine hy 98.7 2.7E-07 5.9E-12 81.0 13.3 202 42-277 26-241 (413)
303 PRK12389 glutamate-1-semialdeh 98.7 2.3E-06 4.9E-11 78.7 20.2 216 40-277 51-281 (428)
304 PRK15400 lysine decarboxylase 98.7 2.7E-07 5.8E-12 88.4 14.4 163 86-266 194-370 (714)
305 TIGR03799 NOD_PanD_pyr putativ 98.7 9.7E-07 2.1E-11 82.7 17.3 184 82-278 121-347 (522)
306 PRK00615 glutamate-1-semialdeh 98.7 2E-06 4.3E-11 79.1 18.8 217 40-278 51-283 (433)
307 COG1103 Archaea-specific pyrid 98.7 5.6E-07 1.2E-11 75.2 13.6 166 87-277 62-231 (382)
308 PF04864 Alliinase_C: Allinase 98.7 2.7E-08 5.9E-13 85.9 5.7 159 88-278 45-209 (363)
309 PRK05367 glycine dehydrogenase 98.7 2.9E-07 6.3E-12 91.5 13.6 155 110-278 558-722 (954)
310 PRK13578 ornithine decarboxyla 98.7 6E-07 1.3E-11 86.1 15.2 147 117-272 196-362 (720)
311 TIGR00461 gcvP glycine dehydro 98.7 4.5E-07 9.8E-12 89.1 14.6 127 138-278 579-710 (939)
312 PRK15399 lysine decarboxylase 98.7 7.9E-07 1.7E-11 85.2 15.3 149 117-276 217-378 (713)
313 PF00282 Pyridoxal_deC: Pyrido 98.7 3.1E-07 6.7E-12 82.8 12.0 202 60-278 51-276 (373)
314 PRK05639 4-aminobutyrate amino 98.6 5.7E-06 1.2E-10 76.6 20.4 223 40-278 51-305 (457)
315 PRK12566 glycine dehydrogenase 98.6 7.4E-07 1.6E-11 87.3 14.6 168 79-266 529-707 (954)
316 TIGR01364 serC_1 phosphoserine 98.6 9.8E-07 2.1E-11 78.9 14.3 138 110-278 56-198 (349)
317 COG0160 GabT 4-aminobutyrate a 98.6 9.1E-06 2E-10 74.0 20.1 224 40-278 54-305 (447)
318 KOG2862 Alanine-glyoxylate ami 98.6 9.9E-07 2.1E-11 75.1 12.9 108 117-232 74-183 (385)
319 TIGR02617 tnaA_trp_ase tryptop 98.6 2.9E-06 6.3E-11 76.8 16.6 209 43-279 42-279 (467)
320 PRK11522 putrescine--2-oxoglut 98.6 5.2E-06 1.1E-10 76.9 18.5 160 110-278 142-315 (459)
321 PRK06082 4-aminobutyrate amino 98.6 1.3E-05 2.7E-10 74.4 20.7 159 110-278 131-312 (459)
322 PRK05355 3-phosphoserine/phosp 98.5 1.2E-06 2.7E-11 78.7 12.6 155 89-277 51-208 (360)
323 PRK07986 adenosylmethionine--8 98.5 7.4E-06 1.6E-10 75.3 16.6 221 40-277 41-288 (428)
324 PRK06062 hypothetical protein; 98.5 2.5E-05 5.5E-10 72.3 20.1 222 40-278 51-298 (451)
325 PRK07482 hypothetical protein; 98.5 2.3E-05 5E-10 72.7 19.1 224 40-278 48-304 (461)
326 COG1003 GcvP Glycine cleavage 98.5 4.8E-06 1E-10 74.0 13.5 143 79-233 95-245 (496)
327 PRK06209 glutamate-1-semialdeh 98.5 1.3E-05 2.9E-10 73.7 17.1 208 40-278 46-265 (431)
328 COG1982 LdcC Arginine/lysine/o 98.4 5.4E-06 1.2E-10 76.8 14.3 158 88-266 72-235 (557)
329 PRK07046 aminotransferase; Val 98.4 3.1E-05 6.8E-10 71.7 19.4 155 110-278 131-299 (453)
330 PRK06173 adenosylmethionine--8 98.4 2.6E-05 5.7E-10 71.7 18.7 159 110-277 105-290 (429)
331 COG0001 HemL Glutamate-1-semia 98.4 2E-05 4.2E-10 70.9 17.0 207 41-276 52-280 (432)
332 PRK05965 hypothetical protein; 98.4 4.2E-05 9.1E-10 71.0 19.7 222 40-278 44-299 (459)
333 PRK06943 adenosylmethionine--8 98.4 4.4E-05 9.4E-10 70.7 19.5 160 110-278 115-306 (453)
334 PRK03080 phosphoserine aminotr 98.4 2E-06 4.4E-11 77.8 10.2 154 88-278 50-208 (378)
335 PRK07030 adenosylmethionine--8 98.4 5E-05 1.1E-09 70.6 19.5 160 110-278 108-299 (466)
336 PRK12403 putative aminotransfe 98.4 5.6E-05 1.2E-09 70.2 19.8 222 40-278 52-306 (460)
337 PRK13360 omega amino acid--pyr 98.4 4.4E-05 9.6E-10 70.5 18.5 160 110-278 107-299 (442)
338 COG1921 SelA Selenocysteine sy 98.4 4E-05 8.7E-10 68.2 17.0 210 42-277 20-235 (395)
339 TIGR00508 bioA adenosylmethion 98.4 6.5E-05 1.4E-09 69.1 19.3 220 40-277 43-291 (427)
340 PRK06916 adenosylmethionine--8 98.4 7.9E-05 1.7E-09 69.2 19.9 160 110-278 117-308 (460)
341 PRK07678 aminotransferase; Val 98.3 8.2E-05 1.8E-09 68.9 19.5 158 110-278 106-297 (451)
342 PRK08742 adenosylmethionine--8 98.3 0.00013 2.8E-09 67.9 20.8 160 110-278 130-321 (472)
343 PF00202 Aminotran_3: Aminotra 98.3 2.4E-05 5.2E-10 69.7 15.1 223 40-279 14-261 (339)
344 PRK06938 diaminobutyrate--2-ox 98.3 0.00015 3.3E-09 67.4 20.4 155 117-278 133-314 (464)
345 PRK05630 adenosylmethionine--8 98.3 8.5E-05 1.8E-09 68.2 18.4 216 40-278 38-285 (422)
346 PRK06105 aminotransferase; Pro 98.3 9E-05 1.9E-09 68.8 18.5 224 40-278 46-302 (460)
347 PRK06917 hypothetical protein; 98.3 0.00015 3.3E-09 67.1 19.9 223 40-278 29-284 (447)
348 TIGR03811 tyr_de_CO2_Ent tyros 98.3 4.9E-05 1.1E-09 72.3 16.7 95 139-235 224-326 (608)
349 PRK07036 hypothetical protein; 98.3 0.00022 4.7E-09 66.4 20.5 161 110-278 113-305 (466)
350 PRK06149 hypothetical protein; 98.2 0.00013 2.7E-09 73.8 19.7 161 110-278 642-828 (972)
351 PLN02760 4-aminobutyrate:pyruv 98.2 0.00022 4.8E-09 66.9 20.1 225 40-278 87-344 (504)
352 PRK09221 beta alanine--pyruvat 98.2 0.00017 3.7E-09 66.7 19.0 160 110-278 110-302 (445)
353 PRK07483 hypothetical protein; 98.2 0.00026 5.7E-09 65.4 20.1 223 40-278 28-284 (443)
354 PRK07481 hypothetical protein; 98.2 0.00028 6.1E-09 65.4 20.1 160 110-278 105-297 (449)
355 PRK06931 diaminobutyrate--2-ox 98.2 0.00047 1E-08 64.0 21.5 225 40-277 56-307 (459)
356 PRK07480 putative aminotransfe 98.1 0.00026 5.6E-09 65.7 18.1 158 110-278 112-303 (456)
357 PRK06148 hypothetical protein; 98.1 0.00045 9.7E-09 70.1 20.1 161 110-278 681-868 (1013)
358 KOG1359 Glycine C-acetyltransf 98.1 5.4E-05 1.2E-09 64.3 11.2 203 42-278 67-276 (417)
359 KOG1401 Acetylornithine aminot 98.0 0.00079 1.7E-08 59.8 17.3 221 40-278 54-289 (433)
360 TIGR03251 LAT_fam L-lysine 6-t 98.0 0.00081 1.8E-08 62.0 18.3 125 110-236 104-266 (431)
361 PRK08297 L-lysine aminotransfe 97.9 0.0013 2.8E-08 60.9 18.6 149 110-266 111-297 (443)
362 PRK05367 glycine dehydrogenase 97.9 0.00041 8.9E-09 69.5 16.1 150 89-278 124-285 (954)
363 TIGR01366 serC_3 phosphoserine 97.9 9.5E-05 2.1E-09 66.5 10.4 145 88-269 43-191 (361)
364 KOG1383 Glutamate decarboxylas 97.9 0.00017 3.7E-09 64.9 11.3 141 86-236 116-263 (491)
365 TIGR00699 GABAtrns_euk 4-amino 97.7 0.003 6.4E-08 58.7 16.3 125 110-236 123-299 (464)
366 PF03841 SelA: L-seryl-tRNA se 97.6 2.9E-05 6.4E-10 68.5 2.5 152 110-277 63-225 (367)
367 COG3033 TnaA Tryptophanase [Am 97.6 0.0019 4.2E-08 56.6 13.1 141 79-231 72-228 (471)
368 KOG1360 5-aminolevulinate synt 97.6 0.0019 4.1E-08 57.3 12.8 161 88-276 218-383 (570)
369 PLN02974 adenosylmethionine-8- 97.5 0.0092 2E-07 59.1 17.9 95 177-278 567-669 (817)
370 PLN02452 phosphoserine transam 97.5 0.0029 6.2E-08 57.0 12.9 139 111-278 72-213 (365)
371 PLN02414 glycine dehydrogenase 97.4 0.0065 1.4E-07 61.1 15.7 154 88-278 150-313 (993)
372 TIGR01365 serC_2 phosphoserine 97.4 0.0017 3.7E-08 58.6 10.2 125 116-269 63-191 (374)
373 KOG1357 Serine palmitoyltransf 97.3 0.0006 1.3E-08 61.2 7.0 158 88-269 184-353 (519)
374 COG3844 Kynureninase [Amino ac 97.3 0.021 4.6E-07 49.6 15.4 111 109-236 93-210 (407)
375 COG0161 BioA Adenosylmethionin 97.2 0.0078 1.7E-07 55.0 13.0 188 40-236 42-263 (449)
376 KOG1358 Serine palmitoyltransf 97.2 0.0081 1.8E-07 53.3 12.0 172 40-236 92-277 (467)
377 PRK12462 phosphoserine aminotr 97.1 0.0092 2E-07 53.5 11.9 134 110-271 68-206 (364)
378 PF02347 GDC-P: Glycine cleava 97.0 0.05 1.1E-06 49.7 16.2 154 90-278 114-276 (429)
379 TIGR00461 gcvP glycine dehydro 96.8 0.08 1.7E-06 53.0 16.4 111 90-229 113-230 (939)
380 PF05889 SLA_LP_auto_ag: Solub 96.7 0.0045 9.8E-08 55.3 6.3 150 110-267 75-227 (389)
381 KOG0628 Aromatic-L-amino-acid/ 96.6 0.0036 7.9E-08 56.5 5.3 93 139-236 184-279 (511)
382 KOG1404 Alanine-glyoxylate ami 96.5 0.1 2.2E-06 46.5 13.4 221 40-277 48-294 (442)
383 COG0403 GcvP Glycine cleavage 96.3 0.2 4.3E-06 45.3 14.0 153 46-227 79-245 (450)
384 KOG2040 Glycine dehydrogenase 96.2 0.07 1.5E-06 50.5 11.4 144 79-231 568-719 (1001)
385 KOG0629 Glutamate decarboxylas 95.8 0.076 1.6E-06 47.8 9.1 91 138-233 197-294 (510)
386 KOG2467 Glycine/serine hydroxy 95.6 0.084 1.8E-06 46.7 8.5 145 114-278 109-265 (477)
387 PLN02672 methionine S-methyltr 95.6 0.24 5.3E-06 50.5 13.0 213 43-277 388-614 (1082)
388 KOG3843 Predicted serine hydro 91.7 5.8 0.00013 33.9 12.1 148 110-268 76-230 (432)
389 KOG1402 Ornithine aminotransfe 91.3 0.34 7.3E-06 42.5 4.6 61 175-237 195-256 (427)
390 PRK12566 glycine dehydrogenase 90.6 4.8 0.00011 40.7 12.4 147 44-226 81-241 (954)
391 KOG1403 Predicted alanine-glyo 89.8 2.1 4.6E-05 37.2 8.0 154 117-276 108-291 (452)
392 cd06568 GH20_SpHex_like A subg 87.4 1.6 3.4E-05 38.9 6.0 70 151-227 24-93 (329)
393 COG0031 CysK Cysteine synthase 86.1 4.5 9.8E-05 35.3 7.9 89 107-202 59-149 (300)
394 cd02742 GH20_hexosaminidase Be 85.0 2.7 5.9E-05 36.8 6.3 69 151-227 22-90 (303)
395 KOG1405 4-aminobutyrate aminot 84.3 2.6 5.6E-05 37.5 5.6 87 176-269 255-348 (484)
396 cd06562 GH20_HexA_HexB-like Be 82.2 3.2 6.9E-05 37.2 5.6 65 151-227 24-88 (348)
397 cd06570 GH20_chitobiase-like_1 80.8 3.8 8.2E-05 36.1 5.5 62 151-226 24-85 (311)
398 PF05368 NmrA: NmrA-like famil 76.4 22 0.00048 29.3 8.7 79 134-226 19-98 (233)
399 TIGR01470 cysG_Nterm siroheme 76.4 35 0.00077 28.0 9.7 99 110-236 10-110 (205)
400 cd06563 GH20_chitobiase-like T 74.6 8.7 0.00019 34.5 6.1 76 152-227 25-104 (357)
401 cd06569 GH20_Sm-chitobiase-lik 73.5 11 0.00023 35.1 6.5 76 151-226 28-114 (445)
402 TIGR00623 sula cell division i 72.2 48 0.001 26.4 9.7 83 134-223 57-139 (168)
403 PF00728 Glyco_hydro_20: Glyco 71.7 3.2 7E-05 36.9 2.6 68 151-227 24-91 (351)
404 COG1105 FruK Fructose-1-phosph 71.2 73 0.0016 28.1 12.0 36 197-234 136-171 (310)
405 KOG2741 Dimeric dihydrodiol de 70.8 71 0.0015 28.5 10.5 75 145-233 59-133 (351)
406 PLN02565 cysteine synthase 68.7 48 0.001 29.3 9.3 46 117-165 73-120 (322)
407 PLN03013 cysteine synthase 68.7 48 0.001 30.7 9.5 78 117-202 181-260 (429)
408 TIGR03573 WbuX N-acetyl sugar 67.9 90 0.002 27.9 11.6 121 87-231 41-169 (343)
409 KOG3846 L-kynurenine hydrolase 67.8 27 0.00059 30.7 7.2 134 85-231 110-253 (465)
410 COG0296 GlgB 1,4-alpha-glucan 67.3 8.5 0.00019 37.2 4.5 37 198-237 206-242 (628)
411 PLN02556 cysteine synthase/L-3 66.9 48 0.001 30.0 9.1 79 117-203 117-197 (368)
412 PLN02970 serine racemase 66.3 38 0.00083 30.0 8.3 53 110-166 76-129 (328)
413 PRK08246 threonine dehydratase 65.6 92 0.002 27.3 10.5 73 86-166 49-122 (310)
414 PF10087 DUF2325: Uncharacteri 65.5 45 0.00098 23.5 8.0 69 147-227 12-80 (97)
415 PF14258 DUF4350: Domain of un 65.4 28 0.0006 22.8 5.6 23 206-228 47-70 (70)
416 TIGR00683 nanA N-acetylneurami 64.4 49 0.0011 28.7 8.4 25 202-229 140-164 (290)
417 COG1648 CysG Siroheme synthase 63.4 78 0.0017 26.1 9.0 117 110-264 13-132 (210)
418 COG0157 NadC Nicotinate-nucleo 63.2 61 0.0013 28.0 8.4 124 116-265 129-268 (280)
419 KOG1209 1-Acyl dihydroxyaceton 61.0 99 0.0022 25.9 8.9 85 110-201 8-92 (289)
420 PRK08638 threonine dehydratase 60.8 48 0.001 29.5 7.8 51 111-165 77-128 (333)
421 cd01562 Thr-dehyd Threonine de 60.6 62 0.0013 28.0 8.5 52 110-166 66-119 (304)
422 KOG1467 Translation initiation 60.4 1.4E+02 0.0031 28.0 10.6 105 107-228 357-467 (556)
423 PF02662 FlpD: Methyl-viologen 60.4 45 0.00098 25.0 6.5 59 159-222 29-90 (124)
424 PRK10595 SOS cell division inh 60.3 84 0.0018 24.9 9.5 84 133-223 52-135 (164)
425 PRK04296 thymidine kinase; Pro 58.7 94 0.002 25.0 10.7 91 133-235 26-119 (190)
426 PRK07476 eutB threonine dehydr 57.9 1.3E+02 0.0029 26.4 10.3 51 112-166 70-121 (322)
427 PRK06815 hypothetical protein; 56.3 1E+02 0.0022 27.0 9.2 52 111-166 70-122 (317)
428 PRK05638 threonine synthase; V 55.7 1.4E+02 0.003 27.7 10.3 54 110-166 113-166 (442)
429 KOG2865 NADH:ubiquinone oxidor 54.1 70 0.0015 28.0 7.2 81 133-223 81-169 (391)
430 COG1932 SerC Phosphoserine ami 53.9 68 0.0015 28.8 7.4 195 42-278 4-213 (365)
431 PRK08329 threonine synthase; V 53.4 1.4E+02 0.0031 26.6 9.7 53 110-166 105-158 (347)
432 cd06564 GH20_DspB_LnbB-like Gl 52.0 16 0.00035 32.3 3.4 26 201-226 74-99 (326)
433 PRK07048 serine/threonine dehy 51.9 96 0.0021 27.3 8.3 53 110-166 73-126 (321)
434 KOG1201 Hydroxysteroid 17-beta 51.5 1.7E+02 0.0036 25.7 12.9 135 110-270 38-183 (300)
435 PLN00011 cysteine synthase 51.1 1.4E+02 0.0031 26.3 9.2 48 117-166 75-123 (323)
436 PF01408 GFO_IDH_MocA: Oxidore 50.9 79 0.0017 22.8 6.5 69 146-227 50-118 (120)
437 TIGR00674 dapA dihydrodipicoli 50.5 1.6E+02 0.0036 25.3 9.5 16 134-149 90-106 (285)
438 smart00642 Aamy Alpha-amylase 50.2 24 0.00051 27.9 3.7 28 207-234 68-95 (166)
439 cd01561 CBS_like CBS_like: Thi 49.5 96 0.0021 26.7 7.8 48 117-166 59-107 (291)
440 COG1606 ATP-utilizing enzymes 48.5 1.3E+02 0.0028 25.7 7.9 98 115-236 22-127 (269)
441 COG2984 ABC-type uncharacteriz 47.2 2E+02 0.0044 25.4 11.3 147 60-230 43-196 (322)
442 cd01563 Thr-synth_1 Threonine 47.0 2E+02 0.0043 25.2 10.5 53 110-166 71-124 (324)
443 PF04016 DUF364: Domain of unk 46.9 1.1E+02 0.0023 23.7 6.9 80 134-225 8-92 (147)
444 CHL00200 trpA tryptophan synth 46.7 1.9E+02 0.0041 24.8 12.7 112 134-261 116-233 (263)
445 PRK06450 threonine synthase; V 46.6 2.1E+02 0.0045 25.5 9.6 54 110-166 98-151 (338)
446 TIGR01136 cysKM cysteine synth 45.8 1.2E+02 0.0025 26.4 7.7 49 116-166 63-112 (299)
447 TIGR01127 ilvA_1Cterm threonin 45.2 2.2E+02 0.0048 25.6 9.8 48 116-165 53-101 (380)
448 TIGR00608 radc DNA repair prot 44.7 78 0.0017 26.4 6.1 53 177-233 150-211 (218)
449 COG2870 RfaE ADP-heptose synth 44.5 62 0.0013 29.6 5.7 68 160-234 115-183 (467)
450 PRK08813 threonine dehydratase 44.0 1.3E+02 0.0029 27.0 7.9 74 86-165 60-134 (349)
451 COG4098 comFA Superfamily II D 44.0 2.5E+02 0.0054 25.4 10.3 60 86-154 100-161 (441)
452 PF02310 B12-binding: B12 bind 43.9 1.2E+02 0.0026 21.8 7.6 67 151-230 21-89 (121)
453 TIGR03815 CpaE_hom_Actino heli 43.5 2.3E+02 0.0049 24.8 11.6 132 87-230 74-213 (322)
454 PLN03244 alpha-amylase; Provis 43.3 42 0.00092 33.5 4.8 41 197-237 429-469 (872)
455 PF10566 Glyco_hydro_97: Glyco 42.9 76 0.0017 27.4 5.9 27 206-232 29-56 (273)
456 COG1204 Superfamily II helicas 42.9 2.5E+02 0.0054 28.3 10.2 57 110-166 48-111 (766)
457 TIGR03581 EF_0839 conserved hy 42.2 2E+02 0.0044 24.0 8.1 72 151-236 141-216 (236)
458 cd06449 ACCD Aminocyclopropane 42.0 2.3E+02 0.0051 24.6 9.2 17 150-166 100-116 (307)
459 PF04914 DltD_C: DltD C-termin 41.5 47 0.001 25.2 4.0 50 175-229 37-95 (130)
460 PF00128 Alpha-amylase: Alpha 41.4 22 0.00048 30.4 2.5 31 207-237 50-80 (316)
461 cd00640 Trp-synth-beta_II Tryp 40.9 1.7E+02 0.0037 24.3 7.9 47 117-166 56-104 (244)
462 PRK13352 thiamine biosynthesis 40.8 3E+02 0.0064 25.4 10.3 170 43-246 61-243 (431)
463 cd06448 L-Ser-dehyd Serine deh 40.7 2.5E+02 0.0055 24.6 11.1 47 117-166 57-105 (316)
464 PRK08198 threonine dehydratase 40.5 2.3E+02 0.0051 25.7 9.2 52 110-165 71-123 (404)
465 PRK06721 threonine synthase; R 40.4 2.7E+02 0.0059 24.9 10.1 47 117-166 81-130 (352)
466 PF12427 DUF3665: Branched-cha 40.4 46 0.001 16.7 2.4 17 195-215 6-22 (23)
467 TIGR01275 ACC_deam_rel pyridox 40.2 1.6E+02 0.0035 25.6 7.8 29 138-166 84-113 (311)
468 cd07476 Peptidases_S8_thiazoli 39.8 1E+02 0.0022 26.3 6.4 70 158-227 74-143 (267)
469 PRK11579 putative oxidoreducta 39.6 2.7E+02 0.0059 24.6 9.8 72 146-230 52-123 (346)
470 PRK07334 threonine dehydratase 39.4 1E+02 0.0023 28.1 6.7 52 110-165 72-124 (403)
471 PF13460 NAD_binding_10: NADH( 38.8 1.8E+02 0.004 22.5 7.9 88 117-223 3-90 (183)
472 cd06565 GH20_GcnA-like Glycosy 38.7 36 0.00078 29.8 3.4 25 203-227 54-78 (301)
473 TIGR03793 TOMM_pelo TOMM prope 38.6 57 0.0012 22.3 3.6 22 191-215 54-75 (77)
474 PF05127 Helicase_RecD: Helica 38.4 39 0.00084 27.1 3.3 44 121-166 11-55 (177)
475 PF07745 Glyco_hydro_53: Glyco 38.2 62 0.0013 28.8 4.8 47 192-240 43-89 (332)
476 TIGR02402 trehalose_TreZ malto 37.9 53 0.0011 31.4 4.6 31 205-235 156-186 (542)
477 TIGR02104 pulA_typeI pullulana 37.7 38 0.00083 32.8 3.7 36 197-235 220-255 (605)
478 KOG1465 Translation initiation 37.7 2.9E+02 0.0062 24.4 10.0 109 108-233 161-275 (353)
479 COG2102 Predicted ATPases of P 37.6 2.4E+02 0.0053 23.5 10.3 95 117-225 7-115 (223)
480 PF13684 Dak1_2: Dihydroxyacet 37.4 2.9E+02 0.0063 24.3 9.2 78 140-229 99-176 (313)
481 PRK00024 hypothetical protein; 37.2 1.1E+02 0.0024 25.5 6.0 53 177-233 156-217 (224)
482 TIGR01761 thiaz-red thiazoliny 36.9 2E+02 0.0044 25.7 7.9 69 146-227 52-120 (343)
483 PF08672 APC2: Anaphase promot 36.7 33 0.00072 22.1 2.2 33 199-231 26-58 (60)
484 TIGR00789 flhB_rel flhB C-term 36.2 32 0.0007 23.8 2.2 27 210-236 28-54 (82)
485 PLN02417 dihydrodipicolinate s 36.2 2.8E+02 0.0061 23.8 9.0 35 192-230 128-162 (280)
486 PF02603 Hpr_kinase_N: HPr Ser 36.1 50 0.0011 24.8 3.4 39 177-227 72-110 (127)
487 PRK06543 nicotinate-nucleotide 36.0 2.7E+02 0.0057 24.3 8.2 70 175-265 202-271 (281)
488 PRK06483 dihydromonapterin red 35.6 2.4E+02 0.0052 22.9 10.5 49 117-166 7-55 (236)
489 PRK06381 threonine synthase; V 35.6 3E+02 0.0066 24.0 9.2 53 110-166 64-117 (319)
490 COG0313 Predicted methyltransf 35.0 2.4E+02 0.0052 24.4 7.6 22 144-166 93-114 (275)
491 PHA02678 hypothetical protein; 34.7 89 0.0019 21.7 4.0 26 211-236 57-86 (89)
492 PF04392 ABC_sub_bind: ABC tra 34.7 1.7E+02 0.0036 25.2 7.0 145 60-226 12-164 (294)
493 PF13872 AAA_34: P-loop contai 34.6 30 0.00065 30.3 2.2 29 208-236 158-187 (303)
494 KOG0384 Chromodomain-helicase 34.4 2.2E+02 0.0048 30.1 8.3 117 89-219 735-860 (1373)
495 PRK11761 cysM cysteine synthas 34.0 3.1E+02 0.0068 23.8 9.1 47 117-166 69-117 (296)
496 COG0329 DapA Dihydrodipicolina 33.7 1E+02 0.0022 27.0 5.4 51 165-220 15-68 (299)
497 PRK06382 threonine dehydratase 33.5 3.1E+02 0.0068 25.0 8.8 76 85-166 51-127 (406)
498 PRK10206 putative oxidoreducta 33.5 2.1E+02 0.0045 25.4 7.5 19 207-225 100-118 (344)
499 PRK06106 nicotinate-nucleotide 33.4 2.4E+02 0.0051 24.5 7.5 70 175-265 203-272 (281)
500 cd00951 KDGDH 5-dehydro-4-deox 33.4 76 0.0016 27.5 4.6 19 202-220 46-64 (289)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-46 Score=336.73 Aligned_cols=222 Identities=18% Similarity=0.218 Sum_probs=193.5
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCC-eEEeecccc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENR-VSTVQCLSG 120 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~-i~~v~t~g~ 120 (280)
.++|+|++|+| +. +.|....+++.+.+. .+.. +|++..|.++||++|++++.++++..+.+++ |++ |+|+
T Consensus 28 ~~vi~l~iG~P-d~---~~p~~i~~a~~~a~~--~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiiv--t~Ga 98 (393)
T COG0436 28 EDVIDLSIGEP-DF---PTPEHIIEAAIEALE--EGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIV--TAGA 98 (393)
T ss_pred CCEEEeCCCCC-CC---CCCHHHHHHHHHHHh--cccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCCH
Confidence 58999999996 44 467777777777666 3322 7889999999999999999888776666666 888 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecC-CCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDP-KTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
++|+.++ +++++.|||+|++++|+|+.|...+...|++++.+++..+ .+|.+|++.+++++.++++ ++++||||
T Consensus 99 ~~al~~~--~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk---~i~ln~P~ 173 (393)
T COG0436 99 KEALFLA--FLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTK---AIILNSPN 173 (393)
T ss_pred HHHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccce---EEEEeCCC
Confidence 9999999 8999999999999999999999999999999999998323 4799999999999988665 99999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||||.+++++++++|+++|++|+++||+||+|.+|.|+.. .+.++.++.+..+++|++.||||+|+|+|||+||+++.
T Consensus 174 NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~-~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~ 251 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA-EHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGP 251 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC-CcCCHhhcCCCcceEEEEecccccccccccceeEeecC
Confidence 9999999999999999999999999999999999999743 34445555444579999999999999999999999976
No 2
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=7.5e-45 Score=329.89 Aligned_cols=259 Identities=51% Similarity=0.885 Sum_probs=206.3
Q ss_pred cccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHH
Q 023599 18 FEQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAK 97 (280)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~ 97 (280)
|+++...+++.+......++....+++|+|+.|.|.+++..++..+.+.++..++.+ .....+|.+..|.++||+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~-~~~~~~Y~~~~G~~~lR~aia~ 80 (396)
T PRK09257 2 FEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLE-TETTKNYLPIEGLAAYRQAVQE 80 (396)
T ss_pred cccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcc-cccCCCcCCCCCCHHHHHHHHH
Confidence 667777777777666666654445688999999874443333334667777666553 2235679999999999999999
Q ss_pred HHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHH
Q 023599 98 LIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQ 177 (280)
Q Consensus 98 ~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 177 (280)
|+.+.++..+.+++|.++.|+|+++|+.++.+++..+.+||+|++++|+|+.|...++..|++++.+++.+++++++|++
T Consensus 81 ~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~ 160 (396)
T PRK09257 81 LLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFD 160 (396)
T ss_pred HhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHH
Confidence 99877665557788722239999999999954455568999999999999999999999999999999844456899999
Q ss_pred HHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEE
Q 023599 178 GMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLV 257 (280)
Q Consensus 178 ~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~ 257 (280)
.+++.+.+...+.++++++|||||||.+++.+++++|+++|++|+++||+||+|.+|.++...+..++.++.+..+++|+
T Consensus 161 ~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~ 240 (396)
T PRK09257 161 AMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLV 240 (396)
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEE
Confidence 99998875433356888899999999999999999999999999999999999999987422234555555545578999
Q ss_pred EecccccccccccccceEEE
Q 023599 258 AQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 258 ~~S~SK~~~~~G~RvG~~v~ 277 (280)
++||||+|+++|||+||+++
T Consensus 241 i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 241 ASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred EEEcCCcCccccccceeEEE
Confidence 99999999999999999985
No 3
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-44 Score=329.60 Aligned_cols=261 Identities=54% Similarity=0.929 Sum_probs=212.2
Q ss_pred cccccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHH
Q 023599 16 SAFEQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLS 95 (280)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~i 95 (280)
++|.++...+.+.+..+.+..++..++++++|+.|.|.++++...+.+.+.++.+.+.. .....+|.+..|.++||+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~Y~~~~G~~~lR~ai 81 (404)
T PTZ00376 3 SLFSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAE-KNLDKEYLPIEGLQSFIEAA 81 (404)
T ss_pred hhhhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhcc-ccCCCCCCCCCCCHHHHHHH
Confidence 45788877777777777776655445688999999975666666777788877766552 23357899999999999999
Q ss_pred HHHHhCCCCccccCCCeEEeecccchhHHHHHHHHH-HhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCc
Q 023599 96 AKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFL-AKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGL 174 (280)
Q Consensus 96 a~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~-~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 174 (280)
++|+.+.++..+++++|++.+|.|+++|+.++..++ +++.+||+|++++|+|+.|...++..|++++.+++.+++++++
T Consensus 82 a~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~ 161 (404)
T PTZ00376 82 QKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGL 161 (404)
T ss_pred HHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCc
Confidence 999977765556788988545999999999884332 5678999999999999999999999999999999844456899
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC-CChhHHHHhhhcCC
Q 023599 175 DFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD-ADALPVRMFVADGG 253 (280)
Q Consensus 175 d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~ 253 (280)
|++.+++++.+.+++.++++++|||||||.+++.+++++|+++|++|+++||+||+|.+|.++.. .+..++..+.+..+
T Consensus 162 d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 241 (404)
T PTZ00376 162 DFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGV 241 (404)
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCC
Confidence 99999999865333346888899999999999999999999999999999999999999998521 12334455544456
Q ss_pred eEEEEecccccccccccccceEEE
Q 023599 254 ECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 254 ~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
++|+++||||+|++||||+||+++
T Consensus 242 ~vi~i~SfSK~~~~~GlRvG~~~~ 265 (404)
T PTZ00376 242 EFLVAQSFSKNMGLYGERIGALHI 265 (404)
T ss_pred cEEEEEeCCCcccccccccceEEE
Confidence 899999999999999999999853
No 4
>PLN02397 aspartate transaminase
Probab=100.00 E-value=3.7e-43 Score=320.78 Aligned_cols=261 Identities=67% Similarity=1.069 Sum_probs=209.5
Q ss_pred cccccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHH
Q 023599 16 SAFEQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLS 95 (280)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~i 95 (280)
++|+++...+...+....+.++.+..+..++|+.|.+.++++.+...+.+.++...+.. .+...+|++..|.++||+++
T Consensus 22 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~-~~~~~~Y~~~~G~~~LR~ai 100 (423)
T PLN02397 22 SRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLA-GSRNKEYLPIEGLAEFNKLS 100 (423)
T ss_pred hHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhc-cCCCCCCCCcCCCHHHHHHH
Confidence 46888888888888888887766666788999999855777666667888887766642 34456899999999999999
Q ss_pred HHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcC
Q 023599 96 AKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLD 175 (280)
Q Consensus 96 a~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 175 (280)
++|+.+.+.....+++|..+.+.+++++..++..++..+.|||+|++++|+|+.|...++..|++++.+++.+++++++|
T Consensus 101 a~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d 180 (423)
T PLN02397 101 AKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLD 180 (423)
T ss_pred HHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccC
Confidence 99997776544445556444466666665555446666679999999999999999999999999999998434458899
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC-CChhHHHHhhhcCCe
Q 023599 176 FQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD-ADALPVRMFVADGGE 254 (280)
Q Consensus 176 ~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~ 254 (280)
++.+++.+.+.+++.+++++++||||||.+++.+++++|+++|++|+++||+||+|.+|.++.. .+..++..+....++
T Consensus 181 ~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 260 (423)
T PLN02397 181 FDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHE 260 (423)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCc
Confidence 9999988865434457999999999999999999999999999999999999999999998531 133444455444568
Q ss_pred EEEEecccccccccccccceEEE
Q 023599 255 CLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 255 ~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
+|+++||||+|+++|||+||+++
T Consensus 261 vI~~~SfSK~~~~~G~RvG~~v~ 283 (423)
T PLN02397 261 ILVAQSYAKNMGLYGERVGALSV 283 (423)
T ss_pred EEEEEECcccCCCccccceEEEE
Confidence 99999999999999999999963
No 5
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-44 Score=313.65 Aligned_cols=220 Identities=18% Similarity=0.167 Sum_probs=187.6
Q ss_pred eecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccc-cCCCeEEeecccchhHHH
Q 023599 47 LGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAI-KENRVSTVQCLSGSGSLR 125 (280)
Q Consensus 47 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~-~~~~i~~v~t~g~~~al~ 125 (280)
|++|.| |++ .|..+.+++ +.+.. ....++|++.+|.++|+++|++.+....+... ..++|++ |.|+.+++.
T Consensus 36 LgqGfp-~~~---~P~fv~ea~-~~~~~-~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlV--T~GA~~ai~ 107 (420)
T KOG0257|consen 36 LGQGFP-DFP---PPKFVTEAA-KNAAK-EPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLV--TAGANEAIS 107 (420)
T ss_pred ccCCCC-CCC---CcHHHHHHH-HHHhc-cchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEE--ecCchHHHH
Confidence 999997 554 333333333 33332 22478999999999999999999766444333 3567888 999999999
Q ss_pred HHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee------cCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 126 IGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY------DPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 126 ~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~------~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
.+ +++++.+||+|+|.+|.|+.|...++..|.+++.+++. ...+|.+|++.++.++.++++ +|++|+||
T Consensus 108 ~~--~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk---~Ii~ntPh 182 (420)
T KOG0257|consen 108 SA--LLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTK---AIILNTPH 182 (420)
T ss_pred HH--HHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCcc---EEEEeCCC
Confidence 99 89999999999999999999999999999999999984 255799999999999999877 99999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
||||.++++++|++|+++|++||++||+||+|..+.+++ ..+..+.+++++.+++|.++||||+||++|||+||++.+.
T Consensus 183 NPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~-~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~ 261 (420)
T KOG0257|consen 183 NPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDG-NKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK 261 (420)
T ss_pred CCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCC-CcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH
Confidence 999999999999999999999999999999999999975 3456667777788999999999999999999999999754
Q ss_pred C
Q 023599 280 H 280 (280)
Q Consensus 280 ~ 280 (280)
|
T Consensus 262 ~ 262 (420)
T KOG0257|consen 262 H 262 (420)
T ss_pred H
Confidence 3
No 6
>PLN02368 alanine transaminase
Probab=100.00 E-value=2.6e-42 Score=312.65 Aligned_cols=249 Identities=17% Similarity=0.148 Sum_probs=196.4
Q ss_pred cCCChHHHHHHHhhcCCCCCeeEeecceee-------cCC-------------CC-----ccchHHHHHHHHHHhccCCC
Q 023599 24 AADIPIYAVMAAFREDPSPMKLNLGFGVYR-------TEE-------------GK-----PLLLNAVRQAEQLLVNDLSA 78 (280)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-------~~~-------------~~-----~~~~~~~~~~~~~~~~~~~~ 78 (280)
.....+...+.+++ ..+.++|+|++|+|. ++. +. ..+++.+.++.+.+......
T Consensus 21 ~~~~~~~~~a~~~~-~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~ 99 (407)
T PLN02368 21 AVRGELYLRASELQ-KEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGG 99 (407)
T ss_pred hcCCHHHHHHHHHH-HHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCC
Confidence 33344555555553 356799999999972 110 00 13667777777665422233
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhh-cCCCEEEEeCCCCCChHHHHHHc
Q 023599 79 DKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKH-YYQHTVYLSQPTYGNHPNFFAAA 157 (280)
Q Consensus 79 ~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~-~~Gd~Vli~~P~y~~~~~~~~~~ 157 (280)
..+|++..|.++||+++++|+.+.++..+++++|++ |+|+++++.++ +..++ .+||+|++++|+|..|...++..
T Consensus 100 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~--~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~ 175 (407)
T PLN02368 100 LGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFL--TDGASKGVMQI--LNAVIRGEKDGVLVPVPQYPLYSATISLL 175 (407)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--cccHHHHHHHH--HHHHcCCCCCEEEEeCCCCccHHHHHHHc
Confidence 567999999999999999999877666678899998 99999999999 77777 69999999999999999999999
Q ss_pred CCeeeEEEeecCCCCCcCHHHHHHHHhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCc
Q 023599 158 GLAMKTYHYYDPKTNGLDFQGMLQDLGAA---PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGF 234 (280)
Q Consensus 158 G~~~~~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~ 234 (280)
|++++.+++..+++|++|++.+++.+++. ..+.++++++|||||||.+++.+++++|+++|++|+++||+||+|.++
T Consensus 176 g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l 255 (407)
T PLN02368 176 GGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQN 255 (407)
T ss_pred CCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 99999999843446899999999998641 113457889999999999999999999999999999999999999999
Q ss_pred ccCcCCChhHHHHhh-h------cCCeEEEEecccccc-cccccccceEEE
Q 023599 235 VMNMDADALPVRMFV-A------DGGECLVAQSYSKTM-GLYGERVGALSV 277 (280)
Q Consensus 235 ~~~~~~~~~~~~~~~-~------~~~~~i~~~S~SK~~-~~~G~RvG~~v~ 277 (280)
.|+......++..+. + ...++|+++||||+| ++||||+||+++
T Consensus 256 ~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~ 306 (407)
T PLN02368 256 IYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEM 306 (407)
T ss_pred ccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEE
Confidence 986432333444332 1 134899999999999 899999999985
No 7
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-41 Score=309.32 Aligned_cols=240 Identities=16% Similarity=0.151 Sum_probs=192.7
Q ss_pred hHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccc
Q 023599 28 PIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAI 107 (280)
Q Consensus 28 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~ 107 (280)
++.+..+.+..+.++++|+|++|+|......+.++...++..+.+. .....+|.+..|.++||+++++|+.+.++..+
T Consensus 18 ~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~ 95 (409)
T PLN00143 18 AVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVR--SAKFNSYAPTGGILPARRAIADYLSNDLPYQL 95 (409)
T ss_pred HHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHh--CcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Confidence 3444445555667789999999997211112344444444444443 23346699999999999999999988766667
Q ss_pred cCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC
Q 023599 108 KENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP 187 (280)
Q Consensus 108 ~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~ 187 (280)
++++|++ |+|+++++.++ +..++.+||.|++++|+|..|...++..|++++.+++.+++++.+|++.+++++.+++
T Consensus 96 ~~~~I~i--t~G~~~al~~~--~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 171 (409)
T PLN00143 96 SPDDVYL--TLGCKHAAEII--IKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENT 171 (409)
T ss_pred CHhhEEE--ecChHHHHHHH--HHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCC
Confidence 8899998 99999999999 7788899999999999999999999999999999998434567899999999876543
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccc
Q 023599 188 SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGL 267 (280)
Q Consensus 188 ~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 267 (280)
+ +++++|||||||.+++.+++++|+++|++|+++||+||+|.++.++.. ...++..+ +...++|+++||||+|++
T Consensus 172 ~---~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~~~~~~~-~~~~~vi~~~SfSK~f~~ 246 (409)
T PLN00143 172 I---AMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK-PFVPMGLF-ASIVPVITLGSISKRWMI 246 (409)
T ss_pred E---EEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC-CCcchhhh-cccCcEEEEccchhhcCC
Confidence 3 788889999999999999999999999999999999999999998632 22333443 334589999999999999
Q ss_pred cccccceEEEE
Q 023599 268 YGERVGALSVV 278 (280)
Q Consensus 268 ~G~RvG~~v~~ 278 (280)
||||+||+++.
T Consensus 247 pGlRvG~~v~~ 257 (409)
T PLN00143 247 PGWGLGWLVTC 257 (409)
T ss_pred CccceEEEEee
Confidence 99999999974
No 8
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.6e-41 Score=309.18 Aligned_cols=255 Identities=18% Similarity=0.175 Sum_probs=203.5
Q ss_pred ccccccCCCCccccccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCC
Q 023599 5 NSEKAKESDGDSAFEQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLP 84 (280)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 84 (280)
.+..+..+.+|.+..++...+...+.++.... ...+.|+|+.|.| +. +.+ +.+.++..+... .. ..+|.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~G~P-~~---~~~-~~~~~~~~~~~~-~~-~~~Y~~ 89 (413)
T PLN00175 20 AAATASTQQPLQVAKRLEKFKTTIFTQMSSLA---IKHGAINLGQGFP-NF---DGP-DFVKEAAIQAIR-DG-KNQYAR 89 (413)
T ss_pred cccccCCCcccchhHHhhcCCCCHHHHHHHHh---hcCCeEecCCCCC-CC---CCC-HHHHHHHHHHHh-cC-CCCcCC
Confidence 44455566777776677766666665544443 2358999999997 32 233 344444444332 22 467999
Q ss_pred CCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeE
Q 023599 85 ITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKT 163 (280)
Q Consensus 85 ~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~ 163 (280)
..|.++||+++++++....+..++++ +|++ |+|+++++.++ +.+++.+||+|++++|+|..|...++..|++++.
T Consensus 90 ~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~v--t~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~ 165 (413)
T PLN00175 90 GFGVPELNSAIAERFKKDTGLVVDPEKEVTV--TSGCTEAIAAT--ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKT 165 (413)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCCHHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEE
Confidence 99999999999999876666556666 6888 99999999999 7788899999999999999999999999999999
Q ss_pred EEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChh
Q 023599 164 YHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 164 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 243 (280)
+++ +++++.+|++.+++.+.++++ +++++|||||||.+++.+++++|+++|++|+++||+||+|.++.++. ...
T Consensus 166 v~~-~~~~~~~~~~~l~~~~~~~~k---~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~--~~~ 239 (413)
T PLN00175 166 VTL-RPPDFAVPEDELKAAFTSKTR---AILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG--DHI 239 (413)
T ss_pred EEC-CcccCCCCHHHHHHhcCcCce---EEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC--ccc
Confidence 998 455588999999999866543 78889999999999999999999999999999999999999999853 233
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
++.++.+..+++|+++||||.|++||||+||++++.
T Consensus 240 s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~ 275 (413)
T PLN00175 240 SMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP 275 (413)
T ss_pred ChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH
Confidence 445554445799999999999999999999999763
No 9
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.3e-41 Score=308.01 Aligned_cols=226 Identities=16% Similarity=0.125 Sum_probs=182.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~ 118 (280)
.+.++|+|+.|++ ..+++....+...+.+. .....+|++..|.++||+++++|+...++..++++ +|++ |+
T Consensus 28 ~~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~ 99 (388)
T PRK07366 28 AGKELIDLSLGSS----DLPAPAHALEAIAQSLH--DPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLP--LI 99 (388)
T ss_pred cCCCeEEeCCCCC----CCCCCHHHHHHHHHHHh--CcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEE--CC
Confidence 4567999999995 33334444444333333 22356799999999999999999977766667777 6888 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
|+++++.++ +..++.+||+|++++|+|..|...++..|++++.+++..+.++.+|++.+++.+.+++ .+++++||
T Consensus 100 Gs~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~---k~i~l~~p 174 (388)
T PRK07366 100 GSQEGTAHL--PLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQA---RLMVLSYP 174 (388)
T ss_pred CcHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccc---eEEEEeCC
Confidence 999999999 7778899999999999999999999999999999999323357789999988775443 37888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||||.+++.+++++|+++|++|+++||+||+|.++.++.....+++.++.....++|+++||||+||+||+|+||++..
T Consensus 175 ~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 254 (388)
T PRK07366 175 HNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN 254 (388)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCC
Confidence 99999999999999999999999999999999999998532213344444333457999999999999999999999864
No 10
>PLN02187 rooty/superroot1
Probab=100.00 E-value=2.8e-41 Score=311.06 Aligned_cols=229 Identities=14% Similarity=0.154 Sum_probs=187.6
Q ss_pred CCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 39 DPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
....++|+|+.|+|.-.+.+..+.++.+...+.+. .+...+|.+..|.++||+++|+|+....+..+++++|++ |+
T Consensus 63 ~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~i--t~ 138 (462)
T PLN02187 63 DVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLR--SGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFL--TA 138 (462)
T ss_pred CCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHh--CCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEE--eC
Confidence 34578999999987222222334445555444444 233567999999999999999999776666678899998 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
|+++++.++ +..++.+||+|++++|+|+.|...++..|++++.+++..++++++|++.+++++.++++ +++++||
T Consensus 139 G~~~al~~~--~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~---~v~i~nP 213 (462)
T PLN02187 139 GCNQGIEIV--FESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTV---AMVVINP 213 (462)
T ss_pred CHHHHHHHH--HHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcE---EEEEeCC
Confidence 999999999 77788999999999999999999999999999999984345689999999998865443 8888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||||.+++.+++++|+++|++|+++||+||+|.++.|+.. ...++..+.. ..++|+++||||+|++||||+||+++.
T Consensus 214 ~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~-~~~s~~~~~~-~~~vi~l~SfSK~f~~pGlRiG~~v~~ 291 (462)
T PLN02187 214 NNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN-PFVSMGKFAS-IVPVLTLAGISKGWVVPGWKIGWIALN 291 (462)
T ss_pred CCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CceeHHHhcc-CCcEEEEecchhhcCCccceeEEEEec
Confidence 99999999999999999999999999999999999998532 3334444432 247999999999999999999999974
No 11
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=4.6e-41 Score=314.30 Aligned_cols=247 Identities=17% Similarity=0.131 Sum_probs=197.3
Q ss_pred ccccccccCCChHH---HHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHH
Q 023599 17 AFEQVARAADIPIY---AVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNK 93 (280)
Q Consensus 17 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~ 93 (280)
..+++.......+. ..+.+. +..+.++|+|+.|+| +..+++.+...++++.+.+. . ..+|++..|.++||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~--~--~~~Y~~~~G~~~lRe 192 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRM-EAAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLT--D--TEGYSDSKGLFSARK 192 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHH-HHcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhh--c--CCCCCCCcChHHHHH
Confidence 34444444444332 333344 235678999999997 33344456677777666554 2 357999999999999
Q ss_pred HHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCC
Q 023599 94 LSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNG 173 (280)
Q Consensus 94 ~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 173 (280)
+|++++..++...+++++|++ |+|+++++.++ +.+++.+||+|++++|+|..|...++..|++++.+++..+.+|.
T Consensus 193 aia~~~~~~~~~~~~~~~I~i--t~G~~eal~~~--~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~ 268 (517)
T PRK13355 193 AIMQYAQLKGLPNVDVDDIYT--GNGVSELINLS--MSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWY 268 (517)
T ss_pred HHHHHHHhcCCCCCChhHEEE--eCcHHHHHHHH--HHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCC
Confidence 999998766655577899998 99999999999 77788999999999999999999999999999999983334588
Q ss_pred cCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCC
Q 023599 174 LDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGG 253 (280)
Q Consensus 174 ~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 253 (280)
+|++.+++++.++++ +++++|||||||.+++.+++++|+++|++|+++||+||+|.+|.|+. ..+.++.++. ...
T Consensus 269 ~d~~~l~~~~~~~~k---~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~-~~~~s~~~~~-~~~ 343 (517)
T PRK13355 269 PDIDDIRSKITSRTK---AIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDG-LEHTSIASLA-PDL 343 (517)
T ss_pred CCHHHHHHhcCcCce---EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCC-CCcccHHHhC-CCC
Confidence 999999998876554 88889999999999999999999999999999999999999999863 2344444442 233
Q ss_pred eEEEEecccccccccccccceEEEE
Q 023599 254 ECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 254 ~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.+++++||||+|++||||+||++++
T Consensus 344 ~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 344 FCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred eEEEEecchhhccCcccceEEEEee
Confidence 6888999999999999999999975
No 12
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-41 Score=286.81 Aligned_cols=262 Identities=54% Similarity=0.941 Sum_probs=246.2
Q ss_pred ccccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHH
Q 023599 17 AFEQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSA 96 (280)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia 96 (280)
+|++++..++++|+.+.+.++.++++++|||++|.+.|+.+.++...+++++.+.+..++ ....|.|..|.+.++++++
T Consensus 1 ~F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~-~~k~Yl~i~G~~~f~~~~~ 79 (396)
T COG1448 1 MFEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQE-KTKNYLPIEGLPEFLEAVQ 79 (396)
T ss_pred CccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccc-cccccCCcCCcHHHHHHHH
Confidence 468899999999999999999999999999999999999999999999999999988544 5788999999999999999
Q ss_pred HHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCH
Q 023599 97 KLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDF 176 (280)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 176 (280)
+.+++.+...+..+++..++|.|||+|+.++++++....+..+|.+++|+|++|..++...|.++.++|++|.++.++|+
T Consensus 80 ~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df 159 (396)
T COG1448 80 KLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDF 159 (396)
T ss_pred HHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccH
Confidence 99999988878889999999999999999999999988888899999999999999999999999999999888889999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEE
Q 023599 177 QGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECL 256 (280)
Q Consensus 177 ~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 256 (280)
+.+.+.+...+++.+++++..+|||||.-++.++|++|+++.++.+++.+.|-+|+.|..+.+++...++.+......++
T Consensus 160 ~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~l 239 (396)
T COG1448 160 DGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELL 239 (396)
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEE
Confidence 99999999888888999999999999999999999999999999999999999999999877778999999988777899
Q ss_pred EEecccccccccccccceEEEEc
Q 023599 257 VAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 257 ~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
+..||||+||+.|.|+|.+.+++
T Consensus 240 va~S~SKnfgLYgERVGa~~vva 262 (396)
T COG1448 240 VASSFSKNFGLYGERVGALSVVA 262 (396)
T ss_pred EEehhhhhhhhhhhccceeEEEe
Confidence 99999999999999999988764
No 13
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=9.5e-41 Score=305.42 Aligned_cols=227 Identities=15% Similarity=0.136 Sum_probs=188.4
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
+.++|+|+.|+|...+..+++.+..+...+.+. ......|.+..|.++||+++++++...++..+++++|++ |+|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i--t~G~ 126 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALR--SGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL--TAGC 126 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHH--cCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE--eCCH
Confidence 568999999997333334455555555554444 233457999999999999999999877777778899998 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
+++++++ +..+..+||+|++++|+|..|...+...|++++.+++..++++.+|++.+++.+.++++ +++++||||
T Consensus 127 ~~al~l~--~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~---~i~i~~P~N 201 (430)
T PLN00145 127 AQAIEII--MSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTV---AMVIINPNN 201 (430)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCce---EEEEeCCCC
Confidence 9999999 77778899999999999999999999999999999974444688999999998876544 888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||.+++.+++++|+++|++++++||+||+|.+|.|+. ....++..+. ...++|+++||||.|++||||+||+++.
T Consensus 202 PtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~-~~~~~~~~~~-~~~~vi~~~S~SK~~~~pG~RlG~iv~~ 277 (430)
T PLN00145 202 PCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS-KPFVPMGVFG-EVAPVLTLGSISKRWVVPGWRLGWIATC 277 (430)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCC-CCccchhhhc-ccCcEEEEeccccccCCCCeeEEEEEEe
Confidence 99999999999999999999999999999999999863 2333444442 3468999999999999999999999974
No 14
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.9e-40 Score=307.68 Aligned_cols=234 Identities=19% Similarity=0.146 Sum_probs=186.1
Q ss_pred CCCCeeEeecceeec---------------CCCC----------ccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHH
Q 023599 40 PSPMKLNLGFGVYRT---------------EEGK----------PLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKL 94 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~---------------~~~~----------~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ 94 (280)
++.++|+|++|+|.+ +..+ .+|...++++.+.+.........|++..|.++||++
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 123 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA 123 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence 347999999999832 2211 124566666554333212234679999999999999
Q ss_pred HHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhh-cCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCC
Q 023599 95 SAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKH-YYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNG 173 (280)
Q Consensus 95 ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~-~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 173 (280)
+++++...++..+++++|++ |+|+++++.++ +..++ .+||+|++++|+|..|...++..|++++.+++..+++|.
T Consensus 124 ia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~--~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~ 199 (481)
T PTZ00377 124 VAAFIERRDGVPKDPSDIFL--TDGASSGIKLL--LQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWS 199 (481)
T ss_pred HHHHHHHhcCCCCChhhEEE--cCCHHHHHHHH--HHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCC
Confidence 99999877777778899998 99999999999 77777 699999999999999999999999999999983334688
Q ss_pred cCHHHHHHHHhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhh-
Q 023599 174 LDFQGMLQDLGAA---PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFV- 249 (280)
Q Consensus 174 ~d~~~l~~~~~~~---~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~- 249 (280)
+|++.+++++.+. ..+.++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|+......++..+.
T Consensus 200 ~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~ 279 (481)
T PTZ00377 200 LDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLL 279 (481)
T ss_pred CCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHH
Confidence 9999999998641 113347777899999999999999999999999999999999999999985322333433321
Q ss_pred h---c---CCeEEEEeccccc-ccccccccceEEE
Q 023599 250 A---D---GGECLVAQSYSKT-MGLYGERVGALSV 277 (280)
Q Consensus 250 ~---~---~~~~i~~~S~SK~-~~~~G~RvG~~v~ 277 (280)
+ . ..++|+++||||+ +++||||+||+++
T Consensus 280 ~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~ 314 (481)
T PTZ00377 280 ELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFEL 314 (481)
T ss_pred hhcccccCCeEEEEEecCCcccccCCcCceEEEEE
Confidence 1 1 1379999999997 6999999999987
No 15
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-40 Score=301.66 Aligned_cols=228 Identities=14% Similarity=0.110 Sum_probs=184.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~ 118 (280)
.+.+.++|+.|.| + .+.+...++++.+.+. .....+|.+..|.++||+++|+|+...++..++++ +|++ |+
T Consensus 31 ~~~~~~~l~~g~p-~---~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~i--t~ 102 (403)
T PRK08636 31 AGEDIIDFSMGNP-D---GPTPQHIIDKLCESAQ--KPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVA--TM 102 (403)
T ss_pred cCCCEEEcCCcCC-C---CCCCHHHHHHHHHHhc--CCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--CC
Confidence 3467899999986 2 2245556666665554 22357899999999999999999977656556777 7988 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHH----HHHHhcCCCCcEEEE
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGM----LQDLGAAPSGAIVLL 194 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l----~~~~~~~~~~~~~v~ 194 (280)
|+++++.++ +..++.+||.|++++|+|+.+...++..|++++.+++..++++++|++.+ ++++.+...+..+++
T Consensus 103 G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~ 180 (403)
T PRK08636 103 GSKEGYVHL--VQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVV 180 (403)
T ss_pred ChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEE
Confidence 999999999 78889999999999999999999999999999999982134578998755 555544333456889
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccce
Q 023599 195 QASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGA 274 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~ 274 (280)
++|||||||.+++.+++++|+++|++|+++||+||+|.++.++. ...+++.++....+++|+++||||+||+||+|+||
T Consensus 181 ~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~ 259 (403)
T PRK08636 181 VNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG-YKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGF 259 (403)
T ss_pred EeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCC-CCCCChhcCCCccccEEEEEecccccCCccceeee
Confidence 99999999999999999999999999999999999999999863 23344555533345789999999999999999999
Q ss_pred EEEE
Q 023599 275 LSVV 278 (280)
Q Consensus 275 ~v~~ 278 (280)
++.+
T Consensus 260 iv~~ 263 (403)
T PRK08636 260 VVGN 263 (403)
T ss_pred eeCC
Confidence 9864
No 16
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-40 Score=298.61 Aligned_cols=241 Identities=14% Similarity=0.134 Sum_probs=192.2
Q ss_pred ccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 023599 21 VARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIF 100 (280)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~ 100 (280)
+.......+...+...+ ..++.++|+.|++ ..+++...++++.+... . ...+|.+..|.++||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~p----~~~~~~~~~~~~~~~~~--~-~~~~Y~~~~G~~~lr~~ia~~~~ 80 (384)
T PRK06348 10 YQQMEVNIMAEIATLAK--KFPDIIDLSLGDP----DLITDESIINAAFEDAK--K-GHTRYTDSGGDVELIEEIIKYYS 80 (384)
T ss_pred HhcCCccHHHHHHHHHH--hcCCcEEcCCCCC----CCCCCHHHHHHHHHHHh--c-CCCCCCCCCCcHHHHHHHHHHHH
Confidence 33333344444444432 2357899999985 23344455555544443 2 24679999999999999999997
Q ss_pred CCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHH
Q 023599 101 GADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGML 180 (280)
Q Consensus 101 ~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 180 (280)
+.++..+++++|++ |+|+++++.++ +.+++.+||+|++++|+|..|...++..|++++.+++.+++++.+|++.++
T Consensus 81 ~~~~~~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 156 (384)
T PRK06348 81 KNYDLSFKRNEIMA--TVGACHGMYLA--LQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLE 156 (384)
T ss_pred HHhCCCCChhhEEE--cCChHHHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHH
Confidence 76666677899998 99999999999 778889999999999999999999999999999998743456789999999
Q ss_pred HHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEec
Q 023599 181 QDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQS 260 (280)
Q Consensus 181 ~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 260 (280)
+.++++++ ++++++||||||.+++.+++++|+++|++++++||+||+|.++.++. ...++.++....+++|+++|
T Consensus 157 ~~~~~~~~---~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~S 231 (384)
T PRK06348 157 ALITSKTK---AIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE--DFVPMATLAGMPERTITFGS 231 (384)
T ss_pred HhhCcCcc---EEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC--CccchhhcCCCcCcEEEEec
Confidence 98865443 67778999999999999999999999999999999999999999863 22344444333569999999
Q ss_pred ccccccccccccceEEEEc
Q 023599 261 YSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 261 ~SK~~~~~G~RvG~~v~~~ 279 (280)
|||+|++||+|+||++++.
T Consensus 232 fSK~~~l~GlRiG~~v~~~ 250 (384)
T PRK06348 232 FSKDFAMTGWRIGYVIAPD 250 (384)
T ss_pred chhccCCccccceeeecCH
Confidence 9999999999999999753
No 17
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-40 Score=299.66 Aligned_cols=247 Identities=13% Similarity=0.122 Sum_probs=189.8
Q ss_pred ccccccccCCChHHHHHHHhh--cCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHH
Q 023599 17 AFEQVARAADIPIYAVMAAFR--EDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKL 94 (280)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ 94 (280)
+.+++....+..+.+...... ...+.+.++|+.|++ + .+ +.+.+.++...... .....+|. ..|.++||++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~---~~-~~~~~~~~~~~~~~-~~~~~~y~-~~G~~~lr~a 77 (399)
T PRK07681 5 LATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNP-D---MP-PADFVREEMVHTAN-QKESYGYT-LSGIQEFHEA 77 (399)
T ss_pred HhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCC-C---CC-CCHHHHHHHHHHHh-ccccCCCC-CCCcHHHHHH
Confidence 334444444444444333321 223568899999985 2 22 33445554444431 12233454 4799999999
Q ss_pred HHHHHhCCCCccccC-CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCC
Q 023599 95 SAKLIFGADSPAIKE-NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNG 173 (280)
Q Consensus 95 ia~~l~~~~~~~~~~-~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 173 (280)
+++|+...++..+++ ++|++ |+|+++++.++ +..++.+||+|++++|+|+.|...++..|++++.+++.+++++.
T Consensus 78 ia~~~~~~~g~~~~~~~~I~i--t~G~~~al~~~--~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 153 (399)
T PRK07681 78 VTEYYNNTHNVILNADKEVLL--LMGSQDGLVHL--PMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFL 153 (399)
T ss_pred HHHHHHHHhCCCCCCCCeEEE--CCCcHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCc
Confidence 999998776666777 78988 99999999999 77788999999999999999999999999999999983233577
Q ss_pred cCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCC
Q 023599 174 LDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGG 253 (280)
Q Consensus 174 ~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 253 (280)
+|++.+++++.+++ ++++++|||||||.+++.+++++|+++|++++++||+||+|.++.++. ....++.++....+
T Consensus 154 ~d~~~l~~~~~~~~---k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~-~~~~~~~~~~~~~~ 229 (399)
T PRK07681 154 PDLELIPEEIADKA---KMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDG-NKPISFLSVPGAKE 229 (399)
T ss_pred CCHHHHHHhccccc---eEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCC-CCCCChhhCCCCcc
Confidence 89999998886543 388889999999999999999999999999999999999999999863 23334444433346
Q ss_pred eEEEEecccccccccccccceEEEE
Q 023599 254 ECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 254 ~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
++|+++||||+||+||+|+||++++
T Consensus 230 ~~i~~~S~SK~~~~~GlRiG~~i~~ 254 (399)
T PRK07681 230 VGVEINSLSKSYSLAGSRIGYMIGN 254 (399)
T ss_pred cEEEEeecccccCCccceeEEEecC
Confidence 8999999999999999999999864
No 18
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=4.3e-40 Score=298.71 Aligned_cols=225 Identities=17% Similarity=0.115 Sum_probs=180.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcc-ccCC-CeEEeec
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPA-IKEN-RVSTVQC 117 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~-~~~~-~i~~v~t 117 (280)
.+.++|+|+.|++ +. ++ ++.+.++..+.. . ...+|++..|.++||+++++|+...++.. ++++ +|++ |
T Consensus 27 ~~~~~i~l~~~~p-~~---~~-~~~~~~~~~~~~--~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~i--t 96 (396)
T PRK09147 27 ADLPPISLSIGEP-KH---PT-PAFIKDALAANL--D-GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLP--V 96 (396)
T ss_pred cCCCeEecCCCCC-CC---CC-CHHHHHHHHHHh--h-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEE--C
Confidence 4678999999996 22 22 344444444433 1 24679999999999999999987665555 6664 8888 9
Q ss_pred ccchhHHHHHHHHHHhhcC---CCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEE
Q 023599 118 LSGSGSLRIGADFLAKHYY---QHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLL 194 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~~~---Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~ 194 (280)
+|+++++.++ +..++.+ ||.|++++|+|..|...++..|++++.+|+..++++.+|++.+++.+.++++ +++
T Consensus 97 ~G~~~al~~~--~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k---~i~ 171 (396)
T PRK09147 97 NGSREALFAF--AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQ---LLF 171 (396)
T ss_pred CChHHHHHHH--HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccE---EEE
Confidence 9999999999 7788889 8999999999999999999999999999993334578999999988765443 778
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhH-HHHhh----hcCCeEEEEecccccccccc
Q 023599 195 QASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALP-VRMFV----ADGGECLVAQSYSKTMGLYG 269 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~----~~~~~~i~~~S~SK~~~~~G 269 (280)
++|||||||.+++.+++++|+++|++|+++||+||+|.++.++......+ +.... +..+|+|+++||||.|++||
T Consensus 172 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G 251 (396)
T PRK09147 172 VCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG 251 (396)
T ss_pred EcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCcc
Confidence 89999999999999999999999999999999999999998863212211 22111 12369999999999999999
Q ss_pred cccceEEEEc
Q 023599 270 ERVGALSVVR 279 (280)
Q Consensus 270 ~RvG~~v~~~ 279 (280)
+|+||++.+.
T Consensus 252 lRiG~~~~~~ 261 (396)
T PRK09147 252 LRSGFVAGDA 261 (396)
T ss_pred ceeeeecCCH
Confidence 9999998753
No 19
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=9e-40 Score=297.66 Aligned_cols=240 Identities=16% Similarity=0.130 Sum_probs=190.7
Q ss_pred ChHHHHHHHh-hcCCCCCeeEeecceeecC-CCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q 023599 27 IPIYAVMAAF-REDPSPMKLNLGFGVYRTE-EGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADS 104 (280)
Q Consensus 27 ~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~ 104 (280)
+.+..+++.+ ....+.++|+|++|+| +. ...+++....++..+.+. .....+|.+..|.++||+++++++....+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~G~p-~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g 91 (409)
T PLN02656 15 GILSLLMESIDDEENGKRVISLGMGDP-TAYSCFHTTHVAQEAVVDALQ--SNKFNGYAPTVGLPQARRAIAEYLSRDLP 91 (409)
T ss_pred hHHHHHHHhccccccCCeeeecCCCCC-CcCCCCCCCHHHHHHHHHHHh--cCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 3344455444 3345678999999997 21 112234444444333344 33356799999999999999999987666
Q ss_pred ccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHh
Q 023599 105 PAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLG 184 (280)
Q Consensus 105 ~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~ 184 (280)
..+++++|++ |+|+++++.++ +..++.+||+|++++|+|+.|....+..|++++.+++..++++.+|++.+++++.
T Consensus 92 ~~~~~~~i~~--t~G~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~ 167 (409)
T PLN02656 92 YKLSLDDVFI--TSGCTQAIDVA--LSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD 167 (409)
T ss_pred CCCCcccEEE--eCChHHHHHHH--HHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc
Confidence 6677899998 99999999999 7777899999999999999999888889999999998333467899999999886
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 185 AAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
++++ ++++++||||||.+++.+++++|+++|++++++||+||+|.+|.++.. ...++.++ +...++|+++||||+
T Consensus 168 ~~~~---~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~~~vi~~~SfSK~ 242 (409)
T PLN02656 168 QNTV---ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN-PFVPMGVF-GSIVPVLTLGSLSKR 242 (409)
T ss_pred cCce---EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC-CcccHHHh-cccCcEEEEcccchh
Confidence 5543 788889999999999999999999999999999999999999998632 33344444 344689999999999
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
|++||||+||++++
T Consensus 243 f~~pGlRiG~~i~~ 256 (409)
T PLN02656 243 WIVPGWRLGWFVTT 256 (409)
T ss_pred ccCcceeEEEEEEe
Confidence 99999999999984
No 20
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-40 Score=299.52 Aligned_cols=224 Identities=18% Similarity=0.169 Sum_probs=183.6
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccC-CCeEEeecccc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKE-NRVSTVQCLSG 120 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~-~~i~~v~t~g~ 120 (280)
.+.|+|+.|.+ +..++++...++..+.+. .....+|++..|.++||+++++++.+..+..+.+ ++|++ |+|+
T Consensus 39 ~~~i~l~~g~~---~~~~p~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~i--t~Ga 111 (405)
T PRK06207 39 GRPVDFSHGDV---DAHEPTPGAFELFSAGVE--RGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELII--TPGT 111 (405)
T ss_pred CCceecCCcCC---CCCCCCHHHHHHHHHHHh--cCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCCc
Confidence 57899999997 222334445555555444 2234679999999999999999987765555667 89998 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeec---CCCCCcCHHHHHHHHhcCCCCcEEEEecC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYD---PKTNGLDFQGMLQDLGAAPSGAIVLLQAS 197 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~---~~~~~~d~~~l~~~~~~~~~~~~~v~~~~ 197 (280)
++++.++ +..++.+||+|++++|+|+.+...++..|++++.+++.. ++++++|++.+++++.++++ +++++|
T Consensus 112 ~~al~~~--~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k---~v~l~~ 186 (405)
T PRK06207 112 QGALFLA--VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVR---VFLFSN 186 (405)
T ss_pred HHHHHHH--HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCe---EEEECC
Confidence 9999999 777889999999999999999999999999999999731 23578999999998876544 888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 198 GHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 198 p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
||||||.+++.+++++|+++|++|+++||+||+|.++.++.. ...++.++....+++|+++||||+|++||+|+||+++
T Consensus 187 P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~-~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~ 265 (405)
T PRK06207 187 PNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT-SYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG 265 (405)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc
Confidence 999999999999999999999999999999999999998632 2333333322356999999999999999999999986
Q ss_pred E
Q 023599 278 V 278 (280)
Q Consensus 278 ~ 278 (280)
+
T Consensus 266 ~ 266 (405)
T PRK06207 266 S 266 (405)
T ss_pred C
Confidence 5
No 21
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.3e-39 Score=303.52 Aligned_cols=229 Identities=19% Similarity=0.138 Sum_probs=188.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCC-CCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLS-ADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
..+++|+|+.|.+ .+|.+.++++.+.+....+ ...+|++..|.++||+++++|+.++++..+++++|++ |+
T Consensus 127 ~~p~~i~~~~~~~------~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~i--T~ 198 (534)
T PLN02231 127 DHPSLLDKSETHG------LFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFL--TD 198 (534)
T ss_pred cCCccCCCCCccc------cCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEE--eC
Confidence 3468899886542 3566888888876653222 3577999999999999999999888777788999998 99
Q ss_pred cchhHHHHHHHHHHhhc-CCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC---CCcEEEE
Q 023599 119 SGSGSLRIGADFLAKHY-YQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP---SGAIVLL 194 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~-~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~---~~~~~v~ 194 (280)
|+++++.++ +..++. +||.|+++.|+|+.|...++..|++++.+++..+++|++|++.|++++.+.. .+.++++
T Consensus 199 Ga~~ai~~~--~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 199 GASPAVHMM--MQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CHHHHHHHH--HHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 999999999 666674 7999999999999999999999999999998323458999999999986521 1345778
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhh------cCCeEEEEecccccc-cc
Q 023599 195 QASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVA------DGGECLVAQSYSKTM-GL 267 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~-~~ 267 (280)
++|||||||.+++.+++++|+++|++++++||+||+|.++.|+......++..+.. ...++|+++||||.| ++
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~ 356 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGE 356 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccC
Confidence 88999999999999999999999999999999999999999953334445554432 123799999999976 89
Q ss_pred cccccceEEEE
Q 023599 268 YGERVGALSVV 278 (280)
Q Consensus 268 ~G~RvG~~v~~ 278 (280)
||||+||+++.
T Consensus 357 pGlRiGy~~~~ 367 (534)
T PLN02231 357 CGKRGGYMEVT 367 (534)
T ss_pred CccceEEEEEe
Confidence 99999999874
No 22
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-39 Score=295.15 Aligned_cols=225 Identities=16% Similarity=0.119 Sum_probs=179.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~ 118 (280)
.++++++|+.|++ ..+.+ +.+.++..+... .....+|.+..|.++||+++++|+....+..++++ +|++ |+
T Consensus 29 ~~~~~i~l~~~~~----~~~~~-~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~--t~ 100 (385)
T PRK09276 29 RGVDVISLGIGDP----DLPTP-DHIIEAMCKAVE-DPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVIS--LI 100 (385)
T ss_pred cCCCEEEecCCCC----CCCCC-HHHHHHHHHHHh-CCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--cc
Confidence 4567899999985 22233 344444444331 22346799999999999999999876545445556 4776 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
|+++++.++ +..++.+||+|++++|+|..|...++..|++++.+++.+++++.+|++.+++.+.++++ +++++||
T Consensus 101 G~~~~i~~~--~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~---~v~l~~p 175 (385)
T PRK09276 101 GSKEGIAHI--PLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAK---LMFINYP 175 (385)
T ss_pred CcHHHHHHH--HHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccce---EEEEeCC
Confidence 999999999 77778999999999999999999999999999999983334577899999888765443 8888899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||||.+++.+++++|+++|++|+++||+||+|.++.++. ....++..+....+++|+++||||.||+||+|+||++++
T Consensus 176 ~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~ 254 (385)
T PRK09276 176 NNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDG-YKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN 254 (385)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCC-CCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC
Confidence 9999999999999999999999999999999999998852 223344444333468999999999999999999999865
No 23
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.5e-39 Score=297.96 Aligned_cols=228 Identities=18% Similarity=0.168 Sum_probs=180.8
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+.++++|++|+| +.... .+++.+.++..+... ....++|.+..|.++||+++++|+...++..+++++|++ |+|
T Consensus 30 ~g~~~~~~~~G~p-~~~~~-~~p~~~~~a~~~~~~-~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~i--t~G 104 (433)
T PRK06855 30 LGVKITWENIGDP-IAKGE-KIPDWMKEIVAELVM-DDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIF--FNG 104 (433)
T ss_pred ccccccccccCCC-cccCC-CCCHHHHHHHHHHhh-cCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEE--cCc
Confidence 3457899999996 22122 344444444444432 233578999999999999999999887777788899998 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH-HHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF-AAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~-~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
+++++.++ + .++.+||.|++++|+|+.|.... ...|++++.+++..++++.+|++.|++++...+ +.++++++||
T Consensus 105 ~~~al~~~--~-~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~-~~~~i~l~~P 180 (433)
T PRK06855 105 LGDAIAKI--Y-GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNP-SIAGILLINP 180 (433)
T ss_pred HHHHHHHH--H-HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCC-CceEEEEECC
Confidence 99999988 5 36789999999999999987543 356889999998323457899999999986432 2347777899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||||.+++.+++++|+++|++||++||+||+|.++.|+. ...+++.++.+ ..++|+++||||+|++||||+||++++
T Consensus 181 ~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~-~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii~p 258 (433)
T PRK06855 181 DNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG-KKTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIEVY 258 (433)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC-CCCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEEEe
Confidence 9999999999999999999999999999999999999853 23445555532 236899999999999999999999973
No 24
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.1e-39 Score=295.31 Aligned_cols=224 Identities=17% Similarity=0.153 Sum_probs=179.5
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeeccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCLS 119 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~g 119 (280)
+++.|+|+.|.| + .+.++ .+.++..+... .....+|.+..|.++||+++++|+....+..++++ +|++ |+|
T Consensus 31 ~~~~i~l~~~~p-~---~~~~~-~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~i--t~G 102 (389)
T PRK08068 31 GHDVINLGQGNP-D---QPTPE-HIVEALQEAAE-NPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAI--LFG 102 (389)
T ss_pred CCCeEEecCCCC-C---CCCCH-HHHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEE--cCC
Confidence 457899999986 2 22333 34444443331 23346798899999999999999875555556667 7888 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
+++++.++ +..++.+||+|++++|+|..|...++..|++++.+++.++.++.+|++.+++.+.+++ .+++++|||
T Consensus 103 ~~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~---~~v~l~~P~ 177 (389)
T PRK08068 103 GKAGLVEL--PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKA---KLMYLNYPN 177 (389)
T ss_pred cHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccc---eEEEEECCC
Confidence 99999998 7788899999999999999999999999999999998323367789999999886543 388889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||||.+++.+++++|+++|++++++||+||+|.++.++.. ...+.....+..+++++++||||+||+||+|+||++..
T Consensus 178 NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~-~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 255 (389)
T PRK08068 178 NPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ-KPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGN 255 (389)
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC-CCcChhhCCCccCCEEEEecchhccCCccceeEeEecC
Confidence 9999999999999999999999999999999999988532 22222233333458999999999999999999999864
No 25
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-39 Score=296.03 Aligned_cols=225 Identities=16% Similarity=0.150 Sum_probs=183.5
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCC-eEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENR-VSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~-i~~v~t~ 118 (280)
.+.++++|+.|.| . .+.+...++++.+.+. .....+|++..|.++||+++++|+....+..+++++ |++ |+
T Consensus 33 ~g~~~i~l~~g~p---~-~~~p~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~v--t~ 104 (394)
T PRK05942 33 QGLDLIDLGMGNP---D-GAAPQPVIEAAIAALA--DPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALP--LL 104 (394)
T ss_pred cCCCeEEcCCCCC---C-CCCCHHHHHHHHHHHh--CCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEE--cc
Confidence 4567999999986 2 2345556666666554 233467999999999999999998765455556664 777 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
|+++++.++ +..++.+||+|++++|+|+.+...+...|++++.+++..++++.+|++.+++.+.++++ +++++||
T Consensus 105 G~~~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k---~i~l~~P 179 (394)
T PRK05942 105 GSKEGLTHL--ALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAK---ILYFNYP 179 (394)
T ss_pred ChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccce---EEEEcCC
Confidence 999999999 77778999999999999999999889999999999983234578999999998865443 8888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||||.+++.+++++|+++|++++++||+||+|.++.++.. ...++.++.+..+++|+++||||.||+||+|+||++..
T Consensus 180 ~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~-~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~ 258 (394)
T PRK05942 180 SNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY-QPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN 258 (394)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC-CCCChhhCCCccccEEEEecchhccCChhhheeeeecC
Confidence 99999999999999999999999999999999999998532 23344444333457899999999999999999999864
No 26
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.8e-39 Score=292.22 Aligned_cols=225 Identities=15% Similarity=0.103 Sum_probs=180.1
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~ 118 (280)
.++++++|+.|++ ..+.+....+...+.+. .....+|++..|.++||+++++|+...++...+++ +|++ |+
T Consensus 27 ~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~--t~ 98 (383)
T TIGR03540 27 EGVDVISLGIGDP----DLPTPKHIVEALCKAAE--NPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLS--LI 98 (383)
T ss_pred cCCCeEEeCCCCC----CCCCCHHHHHHHHHHHh--CCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEE--CC
Confidence 4578999999985 22333333333333333 22356799999999999999999876555545555 5777 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
|+++++.++ +..++.+||+|++++|+|+.|...++..|++++.+++.++.++.+|++.+++.+.+++ .+++++||
T Consensus 99 G~~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~---~~v~i~~P 173 (383)
T TIGR03540 99 GSKEGIAHI--PLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKA---KLMFINYP 173 (383)
T ss_pred CcHHHHHHH--HHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccc---eEEEEeCC
Confidence 999999999 7777899999999999999999999999999999998333357789999999886544 38888899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||||.+++.+++++|+++|++|+++||+||+|.++.++. ....++.++....+++|+++||||+||+||+|+||+++.
T Consensus 174 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~-~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~ 252 (383)
T TIGR03540 174 NNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDG-YKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN 252 (383)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCC-CCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC
Confidence 9999999999999999999999999999999999998853 223333443223458899999999999999999999865
No 27
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-39 Score=293.00 Aligned_cols=224 Identities=15% Similarity=0.140 Sum_probs=178.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcc-ccCC-CeEEeec
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPA-IKEN-RVSTVQC 117 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~-~~~~-~i~~v~t 117 (280)
++.++|+|+.|++ + ...++...+...+.+. ......|+ ..|.++||+++++|+....+.. ++++ +|++ |
T Consensus 42 ~~~~~i~L~~g~p-~---~~~~~~~~~~l~~~~~--~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~i--t 112 (410)
T PRK06290 42 PDMELIDMGVGEP-D---EMADESVVEVLCEEAK--KPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIH--S 112 (410)
T ss_pred CCCCeEEcCCCCC-C---CCCCHHHHHHHHHHHh--CCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEE--c
Confidence 3457899999995 2 2233333333333332 22234565 4899999999999987665554 6665 7988 9
Q ss_pred ccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecC
Q 023599 118 LSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQAS 197 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~ 197 (280)
+|+++++.++ +..++.+||+|+++.|+|..|...++..|++++.+++..+.++.+|++.+++.+.+++ .+++++|
T Consensus 113 ~Gs~~al~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~---k~i~l~n 187 (410)
T PRK06290 113 IGSKPALAML--PSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKA---KLLYLNY 187 (410)
T ss_pred cCHHHHHHHH--HHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccc---eEEEEEC
Confidence 9999999999 7777899999999999999999999999999999999323357789999999886544 3888889
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 198 GHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 198 p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
||||||.+++.+++++|+++|++|+++||+||+|.++.++. ...++.++.+..+++|+++||||.||+||+|+||+++
T Consensus 188 P~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~--~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~ 265 (410)
T PRK06290 188 PNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG--KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG 265 (410)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC--CCcChhcCCCccccEEEEeechhhcCCchhheEeEEe
Confidence 99999999999999999999999999999999999998853 2223344433446789999999999999999999997
Q ss_pred Ec
Q 023599 278 VR 279 (280)
Q Consensus 278 ~~ 279 (280)
+.
T Consensus 266 ~~ 267 (410)
T PRK06290 266 NE 267 (410)
T ss_pred CH
Confidence 53
No 28
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-39 Score=274.12 Aligned_cols=227 Identities=15% Similarity=0.147 Sum_probs=201.1
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
..+|.|+.|+|...+-+.....+.++..+.+. .+...+|.|..|.+..|+++|+|+++.-...+++++|++ |.|.+
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~--Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~l--tsGC~ 136 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALR--SGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVL--TSGCS 136 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHh--cCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEE--eccch
Confidence 47899999999777666667777777777776 455678999999999999999998888777788999999 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+|++++ +.++-+||..|++|.|+|+-|...+...|++++++++..+.+|.+|++.+++.+.++|. +++++||+||
T Consensus 137 qAIe~~--i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~---AivviNP~NP 211 (447)
T KOG0259|consen 137 QAIELA--ISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTV---AIVVINPNNP 211 (447)
T ss_pred HHHHHH--HHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCee---EEEEeCCCCC
Confidence 999999 77777999999999999999999999999999999997777899999999999998876 8888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
+|.+++.+.+++|++.|+|++++||.||+|.+++|+ +.++.++..+. ...-+|+++|+||-|=.||||+||+++-+
T Consensus 212 cGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg-~~pfvpmg~fs-siVPVitlggisKrW~VPGWRlGWi~~hD 287 (447)
T KOG0259|consen 212 CGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFG-DKPFVPMGKFS-SIVPVITLGGISKRWIVPGWRLGWIALHD 287 (447)
T ss_pred CcccccHHHHHHHHHHHHHhCCeEEehhhcceeecC-CCCccchhhcc-ccCceEeecccccccccCCceeeeEEEec
Confidence 999999999999999999999999999999999997 34565665553 23469999999999999999999998754
No 29
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=5.6e-39 Score=292.10 Aligned_cols=225 Identities=16% Similarity=0.160 Sum_probs=175.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~ 118 (280)
.+.+.|+|+.|+| ..+.+...+++..+.+. .....+|.+..|.++||+++++++....+..++++ +|++ |+
T Consensus 28 ~~~~~i~l~~~~p----~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~ 99 (405)
T PRK09148 28 AGADIIDLGMGNP----DLPTPQHIVDKLCETAQ--DPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVA--TL 99 (405)
T ss_pred cCCCeEEcCCCCC----CCCCCHHHHHHHHHHHc--CcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cC
Confidence 4567899999985 23344445555433332 23357799999999999999999865544445666 8988 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
|+++++.++ +..++.+||+|++++|+|..|...++..|++++.+++ +.++ .+.+.+++.+.....+..+++++||
T Consensus 100 G~~~al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~-~~~~--~~~~~l~~~~~~~~~~~~~v~l~~P 174 (405)
T PRK09148 100 GSKEGFANM--AQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPA-EPDE--EFFPALERAVRHSIPKPIALIVNYP 174 (405)
T ss_pred ChHHHHHHH--HHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeC-CCCC--CCccCHHHHHhhccccceEEEEeCC
Confidence 999999999 7777899999999999999999999999999999998 3332 1234455555432233458889999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||||.+++.+++++|+++|++|+++||+||+|.++.++. ....++..+....+++|+++||||.||+||+|+||++++
T Consensus 175 ~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~-~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~ 253 (405)
T PRK09148 175 SNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDG-NPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGN 253 (405)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCC-CCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCC
Confidence 9999999999999999999999999999999999998853 223334444323457899999999999999999999875
No 30
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=8.3e-39 Score=290.79 Aligned_cols=239 Identities=18% Similarity=0.201 Sum_probs=188.5
Q ss_pred hHHHHHHHhhcC--CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCc
Q 023599 28 PIYAVMAAFRED--PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSP 105 (280)
Q Consensus 28 ~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~ 105 (280)
++....+.++.. .+.++++|+.|+|.+++.. .+.+.+.++..+... .....+|.+..|.++||+++++++...+ .
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~-~~~~~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~aia~~~~~~~-~ 91 (401)
T TIGR01264 15 PIRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNL-PTDPEVMQAMKDSLD-SGKYNGYAPTVGALSAREAIASYYHNPD-G 91 (401)
T ss_pred HHHHHHHHHHhhhhcCCCeeecCCCCCCCcCCC-CCCHHHHHHHHHHHh-ccCCCCCCCCCCCHHHHHHHHHHHhhcC-C
Confidence 344444444332 3457899999997322223 344555555544432 2334569899999999999999987643 3
Q ss_pred cccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhc
Q 023599 106 AIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGA 185 (280)
Q Consensus 106 ~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~ 185 (280)
.+.+++|++ |+|+++++.++ +..++.+||+|++++|+|..|...++..|++++.+++..++++++|++.+++.+.+
T Consensus 92 ~~~~~~i~~--t~G~~~al~~~--~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~ 167 (401)
T TIGR01264 92 PIEADDVVL--CSGCSHAIEMC--IAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE 167 (401)
T ss_pred CCCHHHEEE--CcChHHHHHHH--HHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc
Confidence 467899988 99999999999 77778899999999999999999999999999999983334688999999998865
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccc
Q 023599 186 APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTM 265 (280)
Q Consensus 186 ~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 265 (280)
+++ +++++|||||||.+++.+++++|+++|++++++||+||+|.+|.++. ....++.++.. ..++|+++||||+|
T Consensus 168 ~~~---~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~-~~~vi~~~SfSK~~ 242 (401)
T TIGR01264 168 KTA---ALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSG-ATFEPLASLSS-TVPILSCGGLAKRW 242 (401)
T ss_pred Cce---EEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCC-cccccHHHcCC-CCcEEEEccCcccC
Confidence 543 77889999999999999999999999999999999999999999853 23344444422 23699999999999
Q ss_pred cccccccceEEEE
Q 023599 266 GLYGERVGALSVV 278 (280)
Q Consensus 266 ~~~G~RvG~~v~~ 278 (280)
++||+|+||++++
T Consensus 243 ~~~GlRiG~iv~~ 255 (401)
T TIGR01264 243 LVPGWRLGWIIIH 255 (401)
T ss_pred CCccceEEEEEec
Confidence 9999999999986
No 31
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-38 Score=290.80 Aligned_cols=239 Identities=21% Similarity=0.224 Sum_probs=190.0
Q ss_pred hHHHHHHHhhc-CCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCC---
Q 023599 28 PIYAVMAAFRE-DPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGAD--- 103 (280)
Q Consensus 28 ~~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~--- 103 (280)
++......+.. ..++++|+|+.|.| +......+++.+.++..+... .....+|++..|.++||+++++|+....
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~l~~g~p-~~~~~~~p~~~~~~a~~~~~~-~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~ 95 (412)
T PTZ00433 18 PLRTVTDNAKPSPSPKSIIKLSVGDP-TLDGNLLTPAIQTKALVEAVD-SQECNGYPPTVGSPEAREAVATYWRNSFVHK 95 (412)
T ss_pred cHHHHHHhhccCCCCCCeeecCCcCC-CCcCCCCCCHHHHHHHHHHhh-cCCCCCCCCCCCcHHHHHHHHHHHHhhcccc
Confidence 34444455543 35678999999997 221112355666665555442 2335679999999999999999987532
Q ss_pred ---CccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHH
Q 023599 104 ---SPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGML 180 (280)
Q Consensus 104 ---~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 180 (280)
+..+++++|++ |+|+++++.++ +..++.+||+|++++|+|..|...++..|++++.+++..++++++|++.++
T Consensus 96 ~~~~~~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~ 171 (412)
T PTZ00433 96 ESLKSTIKKDNVVL--CSGVSHAILMA--LTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIR 171 (412)
T ss_pred ccccCCCChhhEEE--eCChHHHHHHH--HHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHH
Confidence 34467899998 99999999999 777788999999999999999999999999999999833346889999999
Q ss_pred HHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEec
Q 023599 181 QDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQS 260 (280)
Q Consensus 181 ~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 260 (280)
+.+.++++ +++++|||||||.+++.+++++|+++|+++|++||+||+|.+|.++. ....++..+. ...++|+++|
T Consensus 172 ~~~~~~~~---~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~-~~~~~i~~~S 246 (412)
T PTZ00433 172 RLVDDRTK---ALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG-ATFTSVADFD-TTVPRVILGG 246 (412)
T ss_pred HHhccCce---EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCC-CCccchhhcc-CCCceEEEcc
Confidence 98866443 77889999999999999999999999999999999999999999863 2333444442 2236899999
Q ss_pred ccccccccccccceEEE
Q 023599 261 YSKTMGLYGERVGALSV 277 (280)
Q Consensus 261 ~SK~~~~~G~RvG~~v~ 277 (280)
|||+|++||+|+||+++
T Consensus 247 fSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 247 TAKNLVVPGWRLGWLLL 263 (412)
T ss_pred chhhcCCCCeeEEEEEE
Confidence 99999999999999997
No 32
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=9.3e-39 Score=289.19 Aligned_cols=222 Identities=18% Similarity=0.214 Sum_probs=183.5
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecccc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCLSG 120 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~g~ 120 (280)
..+++|+.|.| + .+.+.+.++.+.+.+. .. ..+|.+..|.++||+++++++....+..++++ +|++ |+|+
T Consensus 26 ~~~i~l~~g~p-~---~~~p~~~~~~~~~~~~--~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~ 96 (387)
T PRK08912 26 HGAINLGQGFP-D---DPGPEDVRRAAADALL--DG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMV--TSGA 96 (387)
T ss_pred CCeEEccCCCC-C---CCCCHHHHHHHHHHHh--cC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEE--eCCc
Confidence 57899999996 2 2345566665555443 22 46799999999999999999876555556677 8988 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
++++.++ +..++.+||+|++++|+|..+...++..|++++.+++ +++++++|++.+++.+.++++ +++++||||
T Consensus 97 ~~al~~~--~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~---~v~l~~p~N 170 (387)
T PRK08912 97 TEALAAA--LLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRL-EPPHWRLPRAALAAAFSPRTK---AVLLNNPLN 170 (387)
T ss_pred HHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccCcCCHHHHHHHhCccce---EEEEeCCCC
Confidence 9999999 7778899999999999999999999999999999998 455688999999998865443 777889999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
|||.+++.+++++|+++|++|+++||+||+|.++.++. ....++.++.+..+++|+++||||.||++|+|+||+++..
T Consensus 171 PtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK08912 171 PAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDG-RRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP 248 (387)
T ss_pred CcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCC-CCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH
Confidence 99999999999999999999999999999999998863 2233344443334689999999999999999999998753
No 33
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=7.8e-39 Score=289.34 Aligned_cols=242 Identities=15% Similarity=0.182 Sum_probs=187.6
Q ss_pred ccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHH
Q 023599 19 EQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKL 98 (280)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~ 98 (280)
++++..+.. +........ ...+.|+|+.|++ ..+ +.+.+.++..+... .. ..+|.+..|.++||++++++
T Consensus 9 ~~~~~~~~~-~~~~~~~~~--~~~~~i~l~~g~p----~~~-~~~~~~~~~~~~~~-~~-~~~Y~~~~G~~~lr~~ia~~ 78 (384)
T PRK12414 9 SKLPDVGTT-IFTVIGQLA--AQHDALNLSQGAP----NFA-PDPALVEGVARAMR-DG-HNQYAPMAGIAALREALAEK 78 (384)
T ss_pred HhcccCCcc-HHHHHHHHH--HhCCeEEcCCCCC----CCC-CCHHHHHHHHHHHH-hC-CCCcCCCCCcHHHHHHHHHH
Confidence 344444443 334433332 2357899999995 222 34444444444332 22 46799999999999999999
Q ss_pred HhCCCCccccC-CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHH
Q 023599 99 IFGADSPAIKE-NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQ 177 (280)
Q Consensus 99 l~~~~~~~~~~-~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 177 (280)
+....+...++ ++|++ |+|+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+++ +++++.+|++
T Consensus 79 l~~~~g~~~~~~~~i~i--t~g~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~ 153 (384)
T PRK12414 79 TERLYGARYDPASEVTV--IASASEGLYAA--ISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKL-SPEDFRVNWD 153 (384)
T ss_pred HHHHhCCCCCCCCcEEE--ECChHHHHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEec-CccccccCHH
Confidence 86654444443 67888 99999999999 7788899999999999999999999999999999998 4556789999
Q ss_pred HHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEE
Q 023599 178 GMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLV 257 (280)
Q Consensus 178 ~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~ 257 (280)
.+++.+.+++ ++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.++.. ...++.++.+..+++|+
T Consensus 154 ~l~~~l~~~~---~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~i~ 229 (384)
T PRK12414 154 EVAAAITPRT---RMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA-RHHSMARHRELAERSVI 229 (384)
T ss_pred HHHhhcCccc---EEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC-CccCcccCcCccCcEEE
Confidence 9999886543 3788899999999999999999999999999999999999999998632 22233333333458999
Q ss_pred EecccccccccccccceEEEEc
Q 023599 258 AQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 258 ~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
++||||.||+||+|+||++++.
T Consensus 230 ~~SfSK~~~~pGlRiG~~v~~~ 251 (384)
T PRK12414 230 VSSFGKSYHVTGWRVGYCLAPA 251 (384)
T ss_pred EecccccccCccceEEEEecCH
Confidence 9999999999999999998753
No 34
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.5e-38 Score=288.31 Aligned_cols=225 Identities=19% Similarity=0.124 Sum_probs=179.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcc--ccCC-CeEEee
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPA--IKEN-RVSTVQ 116 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~--~~~~-~i~~v~ 116 (280)
.+.+.++|+.|++ + ..+ ++.+.++.+... . ...+|.+..|.++||+++++|+.+.++.. ++++ +|++
T Consensus 26 ~~~~~i~l~~~~p-~---~~~-~~~~~~a~~~~~--~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~i-- 95 (393)
T TIGR03538 26 ASKPPIALSIGEP-K---HPT-PAFVLEALRENL--H-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLP-- 95 (393)
T ss_pred cCCCeEEecCCCC-C---CCC-CHHHHHHHHHHh--h-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEE--
Confidence 4578999999995 2 223 344544444433 2 25679999999999999999987765443 5664 7888
Q ss_pred cccchhHHHHHHHHHHhhcCCCE--EEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEE
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHT--VYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLL 194 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~--Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~ 194 (280)
|+|+++++.++ +..++.+||+ |++++|+|..|...++..|++++.+++.+++++.+|++.+++++.++++ +++
T Consensus 96 t~Ga~~al~~~--~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k---~i~ 170 (393)
T TIGR03538 96 VNGTREALFAF--AQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQ---LLF 170 (393)
T ss_pred CCCcHHHHHHH--HHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcce---EEE
Confidence 99999999999 7777899986 9999999999999999999999999983233578899999998865443 777
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhH-HHHhhh----cCCeEEEEecccccccccc
Q 023599 195 QASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALP-VRMFVA----DGGECLVAQSYSKTMGLYG 269 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~----~~~~~i~~~S~SK~~~~~G 269 (280)
++|||||||.+++.+++++|+++|++|+++||+||+|.++.++......+ ...+.. ..+++|+++||||.|++||
T Consensus 171 l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G 250 (393)
T TIGR03538 171 VCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG 250 (393)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcc
Confidence 89999999999999999999999999999999999999998853212222 222211 2468999999999999999
Q ss_pred cccceEEEEc
Q 023599 270 ERVGALSVVR 279 (280)
Q Consensus 270 ~RvG~~v~~~ 279 (280)
+|+||++++.
T Consensus 251 lRvG~~i~~~ 260 (393)
T TIGR03538 251 LRSGFVAGDA 260 (393)
T ss_pred cceEEEecCH
Confidence 9999998753
No 35
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=287.67 Aligned_cols=237 Identities=20% Similarity=0.198 Sum_probs=186.4
Q ss_pred cCCChHHHHHHHhh--cCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhC
Q 023599 24 AADIPIYAVMAAFR--EDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFG 101 (280)
Q Consensus 24 ~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~ 101 (280)
..+..+.++..... ...++++++|+.|++ ..+++....+...+.+. . ...+|++..|.++||+++++++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~~~~~v~~a~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~~~~ 84 (387)
T PRK08960 12 IEPFHVMALLARANELEAAGHDVIHLEIGEP----DFTTAEPIVAAGQAALA--A-GHTRYTAARGLPALREAIAGFYAQ 84 (387)
T ss_pred CCchHHHHHHHHHHHHHhcCCCeEEeCCCCC----CCCCCHHHHHHHHHHHh--c-CCCccCCCCCCHHHHHHHHHHHHH
Confidence 33444444443332 123467899999995 22334444444333333 2 235799999999999999999876
Q ss_pred CCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHH
Q 023599 102 ADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQ 181 (280)
Q Consensus 102 ~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 181 (280)
..+..+++++|++ |+|+++++.++ +..++.+||+|++++|+|+.+...++..|++++.+++..+.++.+|++.+++
T Consensus 85 ~~g~~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 160 (387)
T PRK08960 85 RYGVDVDPERILV--TPGGSGALLLA--SSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVER 160 (387)
T ss_pred HhCCCCChhhEEE--ccCcHHHHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHH
Confidence 5555567899998 99999999999 6777899999999999999999999999999999998323357899999999
Q ss_pred HHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecc
Q 023599 182 DLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSY 261 (280)
Q Consensus 182 ~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 261 (280)
.+.++++ ++++++||||||.+++.+++++|+++|++|+++||+||+|.++.++. ...++ ....+++|+++||
T Consensus 161 ~~~~~~~---~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~--~~~~~---~~~~~~vi~~~S~ 232 (387)
T PRK08960 161 HWNADTV---GALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV--DAASV---LEVDDDAFVLNSF 232 (387)
T ss_pred HhCccce---EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC--CCCCh---hhccCCEEEEeec
Confidence 8875533 77889999999999999999999999999999999999999998853 22222 2334689999999
Q ss_pred cccccccccccceEEEEc
Q 023599 262 SKTMGLYGERVGALSVVR 279 (280)
Q Consensus 262 SK~~~~~G~RvG~~v~~~ 279 (280)
||.||+||+|+||++++.
T Consensus 233 SK~~g~~GlRiG~~~~~~ 250 (387)
T PRK08960 233 SKYFGMTGWRLGWLVAPP 250 (387)
T ss_pred ccccCCcccEEEEEEcCH
Confidence 999999999999999753
No 36
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=292.96 Aligned_cols=224 Identities=19% Similarity=0.269 Sum_probs=193.6
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccC-CC-CCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDL-SA-DKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
+..++|+.|.+ +...++...++++.....+.. .. ...|.+..|.++||+++++++....+....+++|++ |+|
T Consensus 89 ~~~i~f~~g~p---~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii--T~G 163 (459)
T COG1167 89 PSVIDFAGGLP---DPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI--TSG 163 (459)
T ss_pred CceecCCCCCC---CcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE--eCC
Confidence 78899999986 334578888888877766422 22 467888899999999999999866667778889999 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
+++|++++ +..++.|||+|++++|+|.....+++.+|++++.||+ |+ .++|+|.|++.+... +.+.++++++.|
T Consensus 164 ~q~al~l~--~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~-d~--~G~~~e~le~~~~~~-~~k~~y~~P~~q 237 (459)
T COG1167 164 AQQALDLL--LRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPV-DE--DGIDPEALEEALAQW-KPKAVYVTPTFQ 237 (459)
T ss_pred HHHHHHHH--HHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCC-CC--CCCCHHHHHHHHhhc-CCcEEEECCCCC
Confidence 99999999 6677889999999999999999999999999999999 44 379999999999876 456799999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
||||.+||.+++++|+++|++|+++||+||.|++|.++. .+.+++..+ +..+|||+++||||++. ||+|+||++++.
T Consensus 238 NPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~-~p~~~l~~l-d~~~rViy~gSFSK~l~-PglRlG~vv~p~ 314 (459)
T COG1167 238 NPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDG-PPPPPLKAL-DAPGRVIYLGSFSKTLA-PGLRLGYVVAPP 314 (459)
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCC-CCCCChHhh-CCCCCEEEEeeehhhcc-cccceeeeeCCH
Confidence 999999999999999999999999999999999999973 234455655 44679999999999997 999999999874
No 37
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.3e-38 Score=290.14 Aligned_cols=220 Identities=16% Similarity=0.142 Sum_probs=169.3
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhcc--CCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVND--LSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
++++++|+.|++ +.+ .++...+...+.+... .....+|.+..|.++||+++++|+...++..+++++|++ |+
T Consensus 33 ~~~~i~l~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~ 106 (409)
T PRK07590 33 EAKIIRLGIGDV-TQP---LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFI--SD 106 (409)
T ss_pred CCceEEecCcCC-CCC---CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEE--CC
Confidence 457999999995 322 2332233222222210 113467999999999999999998777766778899998 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCe-----------eeEEEeecCCCCCcCHHHHHHHHhcCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLA-----------MKTYHYYDPKTNGLDFQGMLQDLGAAP 187 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~-----------~~~v~~~~~~~~~~d~~~l~~~~~~~~ 187 (280)
|+++++.++ + .++.+||+|++++|+|..|...++..|++ ++.+++..++++.+|.+. +
T Consensus 107 Ga~~al~~l--~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~-- 175 (409)
T PRK07590 107 GAKCDTGNI--L-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------E-- 175 (409)
T ss_pred CHHHHHHHH--H-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------c--
Confidence 999999876 3 45689999999999999999999999987 889998322334444321 2
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccc
Q 023599 188 SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGL 267 (280)
Q Consensus 188 ~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 267 (280)
+..+++++|||||||.+++.+++++|+++|++|+++||+||+|.+|.++.. ...++.++....+++|+++||||+||+
T Consensus 176 -~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~~ 253 (409)
T PRK07590 176 -KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS-LPHSIYEIEGARECAIEFRSFSKTAGF 253 (409)
T ss_pred -CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC-CCcchhhCCCcccceEEEecCccccCC
Confidence 234777889999999999999999999999999999999999999988532 223344443334589999999999999
Q ss_pred cccccceEEEEc
Q 023599 268 YGERVGALSVVR 279 (280)
Q Consensus 268 ~G~RvG~~v~~~ 279 (280)
||+|+||++++.
T Consensus 254 pGlRiG~~i~~~ 265 (409)
T PRK07590 254 TGTRCAYTVVPK 265 (409)
T ss_pred cCceeEEEEcCH
Confidence 999999999763
No 38
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=9.6e-38 Score=284.04 Aligned_cols=235 Identities=17% Similarity=0.160 Sum_probs=186.8
Q ss_pred HHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcccc
Q 023599 29 IYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIK 108 (280)
Q Consensus 29 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~ 108 (280)
+...+++. ...+.++++|+.|.| +.-+.+.+...++++.+.+. ...+|++..|.++||+++++++...+...++
T Consensus 21 ~~~~~~~~-~~~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~ 94 (404)
T PRK09265 21 VLKEAKRL-EEEGHKILKLNIGNP-APFGFEAPDEILRDVIRNLP----TAQGYSDSKGLFSARKAIMQYYQQKGIPDVD 94 (404)
T ss_pred HHHHHHHH-HHcCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhh----cCCCCCCCCCcHHHHHHHHHHHhccCCCCCC
Confidence 33444444 235578999999986 22233345555555554433 2467999999999999999998765544567
Q ss_pred CCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCC
Q 023599 109 ENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPS 188 (280)
Q Consensus 109 ~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~ 188 (280)
+++|++ |+|+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+++..++++.+|++.+++.+.++++
T Consensus 95 ~~~i~~--t~G~~~~l~~~--~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~ 170 (404)
T PRK09265 95 VDDIYI--GNGVSELIVMA--MQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTK 170 (404)
T ss_pred cccEEE--eCChHHHHHHH--HHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccce
Confidence 899998 99999999999 77778899999999999999999999999999998873234577999999998865544
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccccc
Q 023599 189 GAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLY 268 (280)
Q Consensus 189 ~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 268 (280)
+++++|||||||.+++.+++++|+++|+++|++||+||+|.++.++. ....++.++. ...++|+++||||+||+|
T Consensus 171 ---~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~-~~~~vi~~~S~SK~~~~p 245 (404)
T PRK09265 171 ---AIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDG-AVHISIASLA-PDLLCVTFNGLSKAYRVA 245 (404)
T ss_pred ---EEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCC-CCcCCHHHcC-CCceEEEEecchhhccCc
Confidence 78888999999999999999999999999999999999999998853 2333444442 234799999999999999
Q ss_pred ccccceEEEE
Q 023599 269 GERVGALSVV 278 (280)
Q Consensus 269 G~RvG~~v~~ 278 (280)
|+|+||+++.
T Consensus 246 GlRiG~~v~~ 255 (404)
T PRK09265 246 GFRVGWMVLS 255 (404)
T ss_pred ccceEEEEEe
Confidence 9999999974
No 39
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.2e-37 Score=283.33 Aligned_cols=241 Identities=17% Similarity=0.150 Sum_probs=189.5
Q ss_pred ChHHHHHHHhhcC--CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q 023599 27 IPIYAVMAAFRED--PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADS 104 (280)
Q Consensus 27 ~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~ 104 (280)
+++.+....++.. .+.++++|+.|.|...+..+++ +.+.++..+... .....+|.+..|.++||+++++++....+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~-~~~~~~~~~~l~-~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~ 91 (403)
T TIGR01265 14 NPIRAIVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTD-PEAEEAVKDALR-SGKFNGYAPSVGALAAREAVAEYLSSDLP 91 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCCCCCccCCCCCC-HHHHHHHHHHHh-cCCCCCCCCCCCCHHHHHHHHHHHHhhcC
Confidence 3455555555432 3578999999997211223333 444444444332 22235798999999999999999876555
Q ss_pred ccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHh
Q 023599 105 PAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLG 184 (280)
Q Consensus 105 ~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~ 184 (280)
..+.+++|++ |+|+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+++..++++++|++.+++.+.
T Consensus 92 ~~~~~~~ii~--t~G~t~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~ 167 (403)
T TIGR01265 92 GKLTADDVVL--TSGCSQAIEIC--IEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD 167 (403)
T ss_pred CCCCHHHEEE--ecChHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC
Confidence 5567789988 99999999999 7777889999999999999999999999999999988333457899999999886
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 185 AAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
++++ ++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.++. ....++.++. ...++|+++||||+
T Consensus 168 ~~~~---~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~-~~~~vi~~~S~SK~ 242 (403)
T TIGR01265 168 EKTV---AIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD-APFIPMASFA-SIVPVLSLGGISKR 242 (403)
T ss_pred cCcc---EEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC-CCccchhhhc-cCCcEEEEeecccc
Confidence 6544 78889999999999999999999999999999999999999999863 2334455552 33479999999999
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
|++||+|+||+++.
T Consensus 243 ~~~pGlRiG~~v~~ 256 (403)
T TIGR01265 243 WVVPGWRLGWIIIH 256 (403)
T ss_pred cCCCcceEEEEEEe
Confidence 99999999999984
No 40
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=7.4e-38 Score=283.24 Aligned_cols=240 Identities=16% Similarity=0.178 Sum_probs=189.6
Q ss_pred ccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 023599 21 VARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIF 100 (280)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~ 100 (280)
+....+..+.+....+. ..+..|+|+.|.| + .+. ++.+.++..+.. .....+|.+..|.++||+++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~p-~---~~~-~~~~~~a~~~~~--~~~~~~Y~~~~g~~~lr~~ia~~l~ 79 (387)
T PRK07683 9 VKDIQISGIRQFSNMVQ--NYDNLISLTIGQP-D---FPT-PSHVKEAAKRAI--TENYTSYTHNAGLLELRKAACNFVK 79 (387)
T ss_pred HHhCCccHHHHHHHHHH--hcCCeEEecCCCC-C---CCC-CHHHHHHHHHHH--hcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 33334444544444442 2357899999985 2 222 344555555544 2224679889999999999999997
Q ss_pred CCCCccccCC-CeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHH
Q 023599 101 GADSPAIKEN-RVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGM 179 (280)
Q Consensus 101 ~~~~~~~~~~-~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 179 (280)
..++..++++ +|++ |+|+++|+.++ +..++.+||+|+++.|+|..|...++..|+++++++. +++++.+|.+.+
T Consensus 80 ~~~g~~~~~~~~I~~--t~G~~~al~~~--~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l 154 (387)
T PRK07683 80 DKYDLHYSPESEIIV--TIGASEAIDIA--FRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDT-RSTGFRLTAEAL 154 (387)
T ss_pred HHhCCCCCCCCcEEE--eCChHHHHHHH--HHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeec-CcccCCCCHHHH
Confidence 6655556677 8988 99999999999 6777889999999999999999999999999999998 556677889999
Q ss_pred HHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEe
Q 023599 180 LQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQ 259 (280)
Q Consensus 180 ~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 259 (280)
++.+.++++ ++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++. +..++.++.+..+++|+++
T Consensus 155 ~~~~~~~~~---~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~ 229 (387)
T PRK07683 155 ENAITEKTR---CVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ--PHTSIAHFPEMREKTIVIN 229 (387)
T ss_pred HHhcCcCce---EEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC--CcCChhhccCCcCCeEEEe
Confidence 998865443 77889999999999999999999999999999999999999998853 2234444433456899999
Q ss_pred cccccccccccccceEEEEc
Q 023599 260 SYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 260 S~SK~~~~~G~RvG~~v~~~ 279 (280)
||||.||+||+|+||++++.
T Consensus 230 s~SK~~~~pGlRiG~i~~~~ 249 (387)
T PRK07683 230 GLSKSHSMTGWRIGFLFAPS 249 (387)
T ss_pred eccccccCccceeEEEEcCH
Confidence 99999999999999998753
No 41
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=7.6e-38 Score=282.39 Aligned_cols=221 Identities=17% Similarity=0.155 Sum_probs=178.7
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecccc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCLSG 120 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~g~ 120 (280)
.+.|+|+.|++ +. +.+. .+.++..+... .. ..+|.+..|.++||+++++++....+..++++ +|++ |+|+
T Consensus 20 ~~~i~l~~~~~-~~---~~~~-~~~~~~~~~~~-~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~ 90 (378)
T PRK07682 20 EGVISLGVGEP-DF---VTPW-NVREASIRSLE-QG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV--TVGA 90 (378)
T ss_pred CCeEEeCCCCC-CC---CCCH-HHHHHHHHHHh-cC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCh
Confidence 47899999996 22 2232 33333333221 22 46798899999999999999876545545555 7888 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
++|+.++ +..++.+||+|++++|+|..|...++..|.+++.+++..++++++|++.+++++.+++ .++++++|||
T Consensus 91 ~~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~---~~v~~~~p~N 165 (378)
T PRK07682 91 SQALDVA--MRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKT---KAILLCSPNN 165 (378)
T ss_pred HHHHHHH--HHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCccc---EEEEEECCCC
Confidence 9999999 7778899999999999999999999999999999997323457899999999886543 3777899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||.+++.+++++|+++|++|+++||+||+|.++.++. ...++..+.+..+++++++||||.|++||+|+||++++
T Consensus 166 PtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~ 241 (378)
T PRK07682 166 PTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE--AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP 241 (378)
T ss_pred CcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC--CCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC
Confidence 99999999999999999999999999999999999863 22334444444568999999999999999999999875
No 42
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.5e-38 Score=290.27 Aligned_cols=226 Identities=15% Similarity=0.166 Sum_probs=178.9
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhc----------cCCCCCCCCCCCCCHHHHHHHHHHHhCCCCc--cccC
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVN----------DLSADKEYLPITGLPEFNKLSAKLIFGADSP--AIKE 109 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~--~~~~ 109 (280)
..+|+|+.++ |.. +.+.+....+.... .......|++..|.++||+++|+|+.+..+. .+++
T Consensus 38 ~g~i~L~~~E----n~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~ 111 (468)
T PLN02450 38 SGIIQMGLAE----NQL--SFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP 111 (468)
T ss_pred CeeEEeehhH----hHh--hHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence 3689999998 432 33555555544311 0012345888899999999999998765432 3578
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-HcCCeeeEEEeecCCCCCcCHHHHHHHHhcC--
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA-- 186 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~-- 186 (280)
++|++ |+|+++++.++ +.+++.+||.|++++|+|..|...+. ..|++++.+++..++++.+|++.+++++.+.
T Consensus 112 ~~Iii--t~Ga~~al~~l--~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~ 187 (468)
T PLN02450 112 NKLVL--TAGATSANETL--MFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQK 187 (468)
T ss_pred HHeEE--ccChHHHHHHH--HHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHh
Confidence 99998 99999999999 77888999999999999999988888 5899999999833456788999999988652
Q ss_pred -CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhh--------cCCeEEE
Q 023599 187 -PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVA--------DGGECLV 257 (280)
Q Consensus 187 -~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--------~~~~~i~ 257 (280)
..+..+++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|+.. +..++.++.+ ..+++++
T Consensus 188 ~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~-~~~s~l~~~~~~~~~~~~~~~~vi~ 266 (468)
T PLN02450 188 LNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP-GFVSVMEVLKDRKLENTDVSNRVHI 266 (468)
T ss_pred cCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC-CcccHHHHhhhcccccCCCCCcEEE
Confidence 22345788889999999999999999999999999999999999999988532 2323333221 2469999
Q ss_pred EecccccccccccccceEEEE
Q 023599 258 AQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 258 ~~S~SK~~~~~G~RvG~~v~~ 278 (280)
++||||.|++||+|+||++..
T Consensus 267 l~S~SK~~~l~GlRiG~li~~ 287 (468)
T PLN02450 267 VYSLSKDLGLPGFRVGAIYSN 287 (468)
T ss_pred EEeccccCCCCCccEEEEEEC
Confidence 999999999999999999875
No 43
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.9e-37 Score=280.85 Aligned_cols=243 Identities=14% Similarity=0.177 Sum_probs=188.7
Q ss_pred ccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHH
Q 023599 19 EQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKL 98 (280)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~ 98 (280)
+++.......+.++.+... ..++.|+|+.|.+ + ... ++.+.++..+... .. ...|.+..|.++||++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~-~---~~~-~~~~~~~~~~~~~-~~-~~~Y~~~~g~~~lr~~ia~~ 79 (391)
T PRK07309 9 KQLDKIEVSLIRQFDQSIS--DIPGILKLTLGEP-D---FTT-PDHVKEAAKRAID-AN-QSHYTGMAGLLELRQAAADF 79 (391)
T ss_pred hhhhhcCccHHHHHHHHHH--hcCCeEEcCCCCC-C---CCC-CHHHHHHHHHHHh-cC-CCCCCCCCCcHHHHHHHHHH
Confidence 3444444444444433231 2357999999996 2 222 3444444444331 12 34688999999999999999
Q ss_pred HhCCCCcccc-CCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHH
Q 023599 99 IFGADSPAIK-ENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQ 177 (280)
Q Consensus 99 l~~~~~~~~~-~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 177 (280)
+...++..+. +++|++ |+|+++++.++ +..++.+||+|++++|+|..+...++..|++++.+++ +++++.+|++
T Consensus 80 ~~~~~~~~~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~ 154 (391)
T PRK07309 80 VKEKYNLDYAPENEILV--TIGATEALSAS--LTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDT-TENDFVLTPE 154 (391)
T ss_pred HHHHhCCCCCCCCcEEE--eCChHHHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEec-CCcCCcCCHH
Confidence 8766554444 478988 99999999999 7777899999999999999999999999999999998 5556789999
Q ss_pred HHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEE
Q 023599 178 GMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLV 257 (280)
Q Consensus 178 ~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~ 257 (280)
.+++++.+..++..++++++||||||.+++.+++++|+++|++|++++|+||+|.++.++. ....++..+ ..+++|+
T Consensus 155 ~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~-~~~~~~~~~--~~~~~i~ 231 (391)
T PRK07309 155 MLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTG-EPHVSIAEY--LPDQTIL 231 (391)
T ss_pred HHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCC-CCCCCHHHh--ccCCEEE
Confidence 9999987543344588889999999999999999999999999999999999999999853 233333333 2368999
Q ss_pred EecccccccccccccceEEEE
Q 023599 258 AQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 258 ~~S~SK~~~~~G~RvG~~v~~ 278 (280)
++||||+||+||+|+||++++
T Consensus 232 ~~S~SK~~g~~GlRvG~~v~~ 252 (391)
T PRK07309 232 INGLSKSHAMTGWRIGLIFAP 252 (391)
T ss_pred EecChhhccCccceeEEEEeC
Confidence 999999999999999999975
No 44
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1e-37 Score=282.53 Aligned_cols=221 Identities=19% Similarity=0.207 Sum_probs=179.6
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.++++++|+.|.+ + .+.++.. .++..+... . ....|.+..|.++||+++++|+...++..+++++|++ |+|
T Consensus 28 ~~~~~i~l~~~~~-~---~~~~~~~-~~~~~~~~~-~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G 98 (388)
T PRK07337 28 AGRDIIHMGIGEP-D---FTAPEPV-VEAAARALR-R-GVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVV--TAG 98 (388)
T ss_pred cCCCEEEeCCcCC-C---CCCCHHH-HHHHHHHHh-c-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEE--ecC
Confidence 4568999999995 2 2233333 333443331 2 2467999999999999999998766555567899988 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
+++++.++ +..++.+||+|++++|+|..+...++..|++++.+++..++++.+|++.+++.+.++++ ++++++||
T Consensus 99 ~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~v~l~~p~ 173 (388)
T PRK07337 99 ASAALLLA--CLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTR---GVLLASPS 173 (388)
T ss_pred cHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccce---EEEEECCC
Confidence 99999999 66778999999999999999999999999999999983234588999999998875543 77889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
||||.+++.+++++|+++|+++++++|+||+|.++.++.. ..+. ....+++|+++||||.||+||+|+||+++..
T Consensus 174 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~---~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~ 248 (388)
T PRK07337 174 NPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA--PVSA---LSLGDDVITINSFSKYFNMTGWRLGWLVVPE 248 (388)
T ss_pred CCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CcCh---hhccCCEEEEEechhhcCCchhheeeeecCH
Confidence 9999999999999999999999999999999999988532 2122 2234689999999999999999999998753
No 45
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.3e-37 Score=288.45 Aligned_cols=246 Identities=17% Similarity=0.192 Sum_probs=189.0
Q ss_pred cCCChHHHHHHHhhcC-----CCC-CeeEeecceeecCCCC--ccchHHHHHHHHH-Hhc-----cCCCCCCCCCCCCCH
Q 023599 24 AADIPIYAVMAAFRED-----PSP-MKLNLGFGVYRTEEGK--PLLLNAVRQAEQL-LVN-----DLSADKEYLPITGLP 89 (280)
Q Consensus 24 ~~~~~~~~~~~~~~~~-----~~~-~~i~l~~g~~~~~~~~--~~~~~~~~~~~~~-~~~-----~~~~~~~y~~~~G~~ 89 (280)
++..+.+.-++.|..+ .++ .+|+|+..+ |.+ +...+.+++.... +.. .-.....|.+..|.+
T Consensus 22 ~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aE----N~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~ 97 (496)
T PLN02376 22 GENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAE----NQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLK 97 (496)
T ss_pred CCCCchHHHHHHHhCCCCCcccCCCceEEeecch----hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcH
Confidence 4555677777777543 223 689999987 543 3334444443221 100 011234588899999
Q ss_pred HHHHHHHHHHhCCCC--ccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-HcCCeeeEEEe
Q 023599 90 EFNKLSAKLIFGADS--PAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AAGLAMKTYHY 166 (280)
Q Consensus 90 ~lr~~ia~~l~~~~~--~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~G~~~~~v~~ 166 (280)
+||+++|+|+...++ ..+++++|++ |+|++++++++ +..++.|||.|++++|+|+.|...+. ..|++++.+++
T Consensus 98 ~LR~aiA~~l~~~~g~~v~v~pe~Ivi--t~Ga~~al~~l--~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~ 173 (496)
T PLN02376 98 KFRQAIAHFMGKARGGKVTFDPERVVM--SGGATGANETI--MFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPC 173 (496)
T ss_pred HHHHHHHHHHHHHhCCCCcCChhhEEE--ccchHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeC
Confidence 999999999876555 4467899998 99999999999 78889999999999999999998887 58999999999
Q ss_pred ecCCCCCcCHHHHHHHHhc---CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChh
Q 023599 167 YDPKTNGLDFQGMLQDLGA---APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 167 ~~~~~~~~d~~~l~~~~~~---~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 243 (280)
..++++++|++.+++++.. ...+.++++++|||||||.+++.+++++|+++|++++++||+||+|.++.|+. .+..
T Consensus 174 ~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~-~~~~ 252 (496)
T PLN02376 174 SSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG-GDFV 252 (496)
T ss_pred CCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCcc
Confidence 4334689999999876532 12234577889999999999999999999999999999999999999999863 2344
Q ss_pred HHHHhhhc-------CCeEEEEecccccccccccccceEEEE
Q 023599 244 PVRMFVAD-------GGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 244 ~~~~~~~~-------~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
++.++... .+++++++||||.||+||+|+||++..
T Consensus 253 si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~ 294 (496)
T PLN02376 253 SVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSF 294 (496)
T ss_pred cHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEEC
Confidence 55555321 136788999999999999999999874
No 46
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-37 Score=281.14 Aligned_cols=221 Identities=18% Similarity=0.217 Sum_probs=178.7
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcccc-CCCeEEeecccc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIK-ENRVSTVQCLSG 120 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~-~~~i~~v~t~g~ 120 (280)
+++++|+.|.+ ..+++.. +.++..+... ......|.+..|.+++|+++++++....+.... +++|++ |+|+
T Consensus 27 ~~~~~l~~g~~----~~~~~~~-~~~a~~~~~~-~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~--t~G~ 98 (389)
T PRK05957 27 PGTISLGQGVV----SYPPPPE-AIEALNNFLA-NPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVV--TAGS 98 (389)
T ss_pred CCeEEccCCCC----CCCCCHH-HHHHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCCh
Confidence 57899999995 2233433 4444444332 222457999999999999999998665444444 578888 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
++++..+ +..++.+||+|++++|+|..+...++..|++++.++. ++++++|++.++++++++++ +++++||||
T Consensus 99 ~~~l~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~k---lv~~~~p~N 171 (389)
T PRK05957 99 NMAFMNA--ILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPT--DDNYQLQPEAIEQAITPKTR---AIVTISPNN 171 (389)
T ss_pred HHHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeec--CCCCCcCHHHHHHhcCcCce---EEEEeCCCC
Confidence 9999988 6677889999999999999999988999999999998 34678999999999876544 778899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||.+++.+++++|+++|+++|++||+||+|.++.++.. ...++..+.+...++|+++||||.||+||+|+||+++.
T Consensus 172 PtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 248 (389)
T PRK05957 172 PTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV-KHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIP 248 (389)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC-CccChhhCCCccCcEEEEecchhhccCccceeEEEecC
Confidence 999999999999999999999999999999999998532 22233333344569999999999999999999999875
No 47
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-37 Score=279.90 Aligned_cols=228 Identities=21% Similarity=0.263 Sum_probs=181.0
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccc--cCCCeEEeeccc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAI--KENRVSTVQCLS 119 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~--~~~~i~~v~t~g 119 (280)
.++++.++|.+ ...+.+...+.++++.+... ....++|.+..|.++||+++++++.+.+.... ..++|++ |+|
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~i--t~G 77 (388)
T PRK08637 3 ATKYNATIGMA-TEKGGPMYLSSLQDLLNDLT--PDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIV--TNA 77 (388)
T ss_pred ccceecceeeE-ecCCCcchHHHHHHHHHhhc--cccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeE--ccc
Confidence 46789999988 44455677788877777654 34467899999999999999999876543211 2257777 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-HcCCeeeEEEeecCCCCCcCHHHHHHHHhcC-CCCcEEEEecC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA-PSGAIVLLQAS 197 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~~v~~~~ 197 (280)
+++++.++ +..++.+||+|++++|+|+.|...+. ..|++++.+++ ..+++++|++.+++.++.. .+.+.+++++|
T Consensus 78 ~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~-~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~ 154 (388)
T PRK08637 78 LTHGLSLV--ADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPI-FDEDGGFDTDALKEALQAAYNKGKVIVILNF 154 (388)
T ss_pred hHHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecc-cCCCCcCCHHHHHHHHHhhccCCCEEEEEeC
Confidence 99999999 77778999999999999999998865 68999999998 3345679999999988721 12345788999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHh-----CCceeEEcccCCCcccCcCCChhHH-HHhhhcCCeE--EEEecccccccccc
Q 023599 198 GHNPTGIDPTAQQWEQIRQLMRL-----KRLLPFFDCAYQGFVMNMDADALPV-RMFVADGGEC--LVAQSYSKTMGLYG 269 (280)
Q Consensus 198 p~NPTG~~~~~~~l~~i~~~~~~-----~~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~~~~--i~~~S~SK~~~~~G 269 (280)
||||||.+++.+++++|+++|++ |+++||+||+|.+|.++.. ...++ ..+.+..+++ ++++||||.|++||
T Consensus 155 P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~-~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pG 233 (388)
T PRK08637 155 PNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS-YKESLFAALANLHSNILAVKLDGATKEEFVWG 233 (388)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCc-cchhhHHHhhcccccceEEEeccccccCCCcc
Confidence 99999999999999999998875 8999999999999998642 23332 2333444564 55679999999999
Q ss_pred cccceEEEE
Q 023599 270 ERVGALSVV 278 (280)
Q Consensus 270 ~RvG~~v~~ 278 (280)
+|+||++++
T Consensus 234 lRlG~~~~~ 242 (388)
T PRK08637 234 FRVGFITFG 242 (388)
T ss_pred cceEEEEEc
Confidence 999999975
No 48
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-37 Score=279.80 Aligned_cols=226 Identities=19% Similarity=0.135 Sum_probs=181.9
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+.+.++|+.|++ .. .+.+.+.++..+... ......|.+..|.++||+++++++...++..+++++|++ |+|
T Consensus 27 ~~~~~i~l~~~~~----~~-~~~~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G 98 (386)
T PRK07550 27 ADGPLIDLSQAVP----GY-PPPPELLRALAEAAA-DPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHI--TSG 98 (386)
T ss_pred cCCCeEEeCCCCC----CC-CCCHHHHHHHHHHHh-CcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEE--ecC
Confidence 4567899999995 22 234445555444432 233567989999999999999998776666677899998 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
+++++.++ +..++.+||+|++++|+|..+...++..|++++.+++.++.++.+|.+.+++.+.++++ ++++++||
T Consensus 99 ~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~---~v~~~~P~ 173 (386)
T PRK07550 99 CNQAFWAA--MVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTR---AIALVTPN 173 (386)
T ss_pred cHHHHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCc---EEEEeCCC
Confidence 99999999 66778899999999999999999999999999999983234567899999999876544 66677899
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
||||.+++.+++++|+++|+++|++||+||+|.+|.++.... .++.+..+.+.++++++||||+||+||+|+||+++..
T Consensus 174 NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~ 252 (386)
T PRK07550 174 NPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAP-HDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP 252 (386)
T ss_pred CCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCC-cchhhCCCccccEEEEecchhhccCcccceEeeecCH
Confidence 999999999999999999999999999999999997642221 2222222335689999999999999999999998753
No 49
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2e-37 Score=279.16 Aligned_cols=230 Identities=14% Similarity=0.033 Sum_probs=175.6
Q ss_pred HHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcccc
Q 023599 29 IYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIK 108 (280)
Q Consensus 29 ~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~ 108 (280)
+.+..+..+...+.++++|+.|++ + .+.+ +.+.++..+.. .....|.+..|.++||+++++++...++..+.
T Consensus 11 ~~~~~~~~~~~~~~~~i~l~~~~p-~---~~~~-~~~~~a~~~~~---~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~ 82 (374)
T PRK05839 11 LRELLKEITPNKEYKGLDLTIGEP-Q---FETP-KFIQDALKNNA---HLLNKYPKSAGEESLREAQRGFFKRRFKIELK 82 (374)
T ss_pred HHHHHHHhhhcCCCCeEEcCCCCC-C---CCCC-HHHHHHHHHHh---hccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 334444453322558999999996 2 2233 45555444432 12567999999999999999999776665677
Q ss_pred CCCeEEeecccchhHHHHHHHHHHhh--cCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC
Q 023599 109 ENRVSTVQCLSGSGSLRIGADFLAKH--YYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 109 ~~~i~~v~t~g~~~al~~~~~~~~~~--~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 186 (280)
+++|++ |+|+++++..+ +..++ .+||.|+++.|+|..|...++..|++++++++..++++.+|.+..+ + ++
T Consensus 83 ~~~I~i--t~G~~~al~~~--~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~ 155 (374)
T PRK05839 83 ENELIP--TFGTREVLFNF--PQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QE 155 (374)
T ss_pred cceEEE--ecCcHHHHHHH--HHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-cc
Confidence 899998 99999999888 55443 4789999999999999999999999999999832334666654332 2 22
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhh-----hcCCeEEEEecc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFV-----ADGGECLVAQSY 261 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~S~ 261 (280)
+ .+++++|||||||.+++.+++++|+++|+++|++||+||+|.++.++. ..+++.... ...+++|+++||
T Consensus 156 ~---k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~--~~~s~~~~~~~~~~~~~~~vi~~~Sf 230 (374)
T PRK05839 156 V---DLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT--PPPSLLEASILVGNESFKNVLVINSI 230 (374)
T ss_pred c---cEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC--CCCCHhhhhcccCccccCcEEEEecc
Confidence 3 377889999999999999999999999999999999999999987642 222322221 123699999999
Q ss_pred cccccccccccceEEEE
Q 023599 262 SKTMGLYGERVGALSVV 278 (280)
Q Consensus 262 SK~~~~~G~RvG~~v~~ 278 (280)
||+|++||+|+||+++.
T Consensus 231 SK~~~~~GlRiG~ii~~ 247 (374)
T PRK05839 231 SKRSSAPGLRSGFIAGD 247 (374)
T ss_pred ccccCCccceeEEEecC
Confidence 99999999999999875
No 50
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-37 Score=278.78 Aligned_cols=224 Identities=20% Similarity=0.164 Sum_probs=181.1
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
+++++|+.|++ ..+.+ +.+.++..+... . ...+|.+..|.++||+++++++....+..+++++|++ |+|++
T Consensus 24 ~~~i~l~~g~~----~~~~~-~~~~~~~~~~~~-~-~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~ 94 (382)
T PRK06108 24 EGVLPLWFGES----DLPTP-DFIRDAAAAALA-D-GETFYTHNLGIPELREALARYVSRLHGVATPPERIAV--TSSGV 94 (382)
T ss_pred CCeEEecCCCC----CCCCC-HHHHHHHHHHHh-c-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEE--eCChH
Confidence 57899999995 22233 444444444432 2 2356999999999999999998765555567899998 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecC-CCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDP-KTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+++..+ .++.+|++.+++.+.+++ +++++++|||
T Consensus 95 ~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~---~~i~l~~p~N 169 (382)
T PRK06108 95 QALMLA--AQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRT---RALFINSPNN 169 (382)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccc---eEEEEECCCC
Confidence 999999 7777889999999999999999999999999999998322 346799999999886543 3788889999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
|||.+++.+++++|+++|+++++++|+||+|.++.++.....+++..+.+..+++++++||||.||++|+|+||+++..
T Consensus 170 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~ 248 (382)
T PRK06108 170 PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP 248 (382)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH
Confidence 9999999999999999999999999999999999885222233334443445689999999999999999999998753
No 51
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=2e-37 Score=280.42 Aligned_cols=221 Identities=17% Similarity=0.187 Sum_probs=179.4
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecccc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCLSG 120 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~g~ 120 (280)
.+.|+|+.|.+ +.+ .+ +.+.++.++... ....+|.+..|.++||+++++++....+....++ +|++ |+|+
T Consensus 30 ~~~i~l~~g~~-~~~---~~-~~~~~~~~~~~~--~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~--t~G~ 100 (386)
T PRK09082 30 HGAINLSQGFP-DFD---GP-PYLVEALAYAMA--AGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITV--TAGA 100 (386)
T ss_pred CCEEEecCCCC-CCC---CC-HHHHHHHHHHHH--cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCH
Confidence 47899999986 322 22 333344444331 2245799999999999999999865544444444 7887 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
++++.++ +..++.+||+|+++.|+|..+...++..|++++.+++ +++++.+|++.+++.+.++++ ++++++|||
T Consensus 101 ~~al~~~--~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~---~v~l~~p~N 174 (386)
T PRK09082 101 TEALFAA--ILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVAL-QPPDFRVDWQRFAAAISPRTR---LIILNTPHN 174 (386)
T ss_pred HHHHHHH--HHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccccCCHHHHHHhcCccce---EEEEeCCCC
Confidence 9999999 7777899999999999999999999999999999998 455688999999999865433 778889999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||.+++.+++++|+++|++|++++|+||+|.++.++.. ...++.++.+..+++|+++||||.||+||+|+||++++
T Consensus 175 PtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~-~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~ 251 (386)
T PRK09082 175 PSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA-GHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP 251 (386)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC-CCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC
Confidence 999999999999999999999999999999999998532 23344444444579999999999999999999999875
No 52
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=4.4e-37 Score=278.21 Aligned_cols=241 Identities=20% Similarity=0.191 Sum_probs=187.6
Q ss_pred ccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 023599 21 VARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIF 100 (280)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~ 100 (280)
+...+...+.++..... ..++++|+.|.| +.+ .+.+.++.+.+.+. .. ..+|.+..|.++||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~p-~~~---~~~~~~~~~~~~~~--~~-~~~Y~~~~g~~~lr~~ia~~~~ 75 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV---RTGAVNLGQGFP-DED---GPPEMLEAAQEAIA--GG-VNQYPPGPGIPELRAAIAAQRR 75 (387)
T ss_pred hhhcCccHHHHHHHHHh---hCCeEEccCCCC-CCC---CCHHHHHHHHHHHh--cC-CCCCCCCCCCHHHHHHHHHHHH
Confidence 33344444544444442 357899999997 333 33444444444343 22 4679989999999999999976
Q ss_pred CCCCccccCC-CeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecC-CCCCcCHHH
Q 023599 101 GADSPAIKEN-RVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDP-KTNGLDFQG 178 (280)
Q Consensus 101 ~~~~~~~~~~-~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~ 178 (280)
...+...+++ +|++ |+|+++++.++ +.+++.+||+|+++.|+|..+...++..|++++.+++.+. .++.+|++.
T Consensus 76 ~~~g~~~~~~~~i~~--t~G~~~al~~~--~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 151 (387)
T PRK07777 76 RRYGLEYDPDTEVLV--TVGATEAIAAA--VLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDA 151 (387)
T ss_pred HHhCCCCCCCCcEEE--eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHH
Confidence 5555445555 7888 99999999998 7788889999999999999999999999999999998433 257799999
Q ss_pred HHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEE
Q 023599 179 MLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVA 258 (280)
Q Consensus 179 l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~ 258 (280)
+++.+.++++ +++++|||||||.+++.+++++|+++|+++++++|+||+|.++.++.. ...++..+.+..+++|++
T Consensus 152 l~~~~~~~~~---~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~~~~i~~ 227 (387)
T PRK07777 152 LRAAVTPRTR---ALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA-RHLPLATLPGMRERTVTI 227 (387)
T ss_pred HHHhcCcccE---EEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC-CcccHhhCCCCcCcEEEE
Confidence 9998865433 778899999999999999999999999999999999999999998532 233444443335689999
Q ss_pred ecccccccccccccceEEEEc
Q 023599 259 QSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 259 ~S~SK~~~~~G~RvG~~v~~~ 279 (280)
+||||.||+||+|+||++++.
T Consensus 228 ~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK07777 228 SSAAKTFNVTGWKIGWACGPA 248 (387)
T ss_pred eechhhccCcCceeEEEecCH
Confidence 999999999999999998753
No 53
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.5e-37 Score=279.89 Aligned_cols=213 Identities=18% Similarity=0.124 Sum_probs=176.6
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
+.++++|+.|+| ++. .+... +++.+.+. .. ..+|++..|.++||+++++++.+ +.+++|++ |+|+
T Consensus 25 ~~~~~~~~~~e~-~~~---~~~~~-~~~~~~~~--~~-~~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~vi~--t~G~ 89 (373)
T PRK07324 25 ESCIDSLTLEEL-LAL---AGKNP-EAFYQELG--QK-KLTYGWIEGSPEFKEAVASLYQN-----VKPENILQ--TNGA 89 (373)
T ss_pred cCCCCCCcHHHH-Hhc---cCcch-HHHHHHHh--cC-CccCCCCCCCHHHHHHHHHHhcC-----CChhhEEE--cCCh
Confidence 468999999997 443 33333 44444443 22 46899999999999999999743 34689988 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
++++.++ +.+++.+||+|+++.|+|..+...++..|++++.+++..+.++.+|++.+++.+.++++ ++++++|||
T Consensus 90 ~~al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k---li~i~~p~N 164 (373)
T PRK07324 90 TGANFLV--LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTK---LICINNANN 164 (373)
T ss_pred HHHHHHH--HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCc---EEEEeCCCC
Confidence 9999999 77888999999999999999999999999999999984334577899999998866554 888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||.+++.+++++|+++|++||++||+||+|.++.++. ..+++ .+..+++|+++||||.||+||+|+||+++.
T Consensus 165 PtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~--~~~s~---~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~ 237 (373)
T PRK07324 165 PTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG--STPSI---ADLYEKGISTNSMSKTYSLPGIRVGWIAAN 237 (373)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCCCh---hhccCCEEEEecchhhcCCccceeEEEecC
Confidence 99999999999999999999999999999999998853 22222 233468999999999999999999999874
No 54
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.1e-37 Score=278.57 Aligned_cols=224 Identities=14% Similarity=0.146 Sum_probs=181.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.++++++|+.|.| + .+. .+.+.++..+... . ...+|.+..|.++||+++++++....+..+.+++|++ |+|
T Consensus 31 ~~~~~i~l~~g~p-~---~~~-~~~~~~~~~~~~~-~-~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~--t~G 101 (402)
T PRK06107 31 AGRSIVDLTVGEP-D---FDT-PDHIKQAAVAAIE-R-GETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITV--GGG 101 (402)
T ss_pred ccCCEEEcCCCCC-C---CCC-CHHHHHHHHHHHH-c-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCC
Confidence 4568899999996 2 222 3445555444442 2 2467999999999999999998766566667899998 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
+++|+..+ +..++.+||+|++++|+|..|...+...|.+++.+++..++++.+|++.+++.+.+++ .+++++|||
T Consensus 102 ~~~al~~~--~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~---~~v~l~~p~ 176 (402)
T PRK06107 102 AKQAIFLA--LMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRT---RWLILNAPS 176 (402)
T ss_pred HHHHHHHH--HHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCc---eEEEEECCC
Confidence 99999999 7777889999999999999999999989998888888323457789999999886543 377888999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhC-CceeEEcccCCCcccCcCCChhHHHHhhh-cCCeEEEEecccccccccccccceEEE
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLK-RLLPFFDCAYQGFVMNMDADALPVRMFVA-DGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
||||.+++.+++++|+++|+++ ++++|+||+|.++.++.. ..+++.++.. ..+++|+++||||+|++||+|+||+++
T Consensus 177 NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~ 255 (402)
T PRK06107 177 NPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE-PTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG 255 (402)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC-CCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec
Confidence 9999999999999999999998 999999999999988532 3334444422 346999999999999999999999986
Q ss_pred E
Q 023599 278 V 278 (280)
Q Consensus 278 ~ 278 (280)
+
T Consensus 256 ~ 256 (402)
T PRK06107 256 P 256 (402)
T ss_pred C
Confidence 5
No 55
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=6.6e-37 Score=277.77 Aligned_cols=225 Identities=15% Similarity=0.137 Sum_probs=179.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~ 118 (280)
.+.++++|+.|.| +. ..+...+++..+.+. .....+|.+..|.++||+++++|+...++..++++ ++++ |+
T Consensus 27 ~~~~~i~l~~g~p-~~---~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~--t~ 98 (395)
T PRK08175 27 RGEDIIDFSMGNP-DG---PTPPHIVEKLCEVAQ--RPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIV--TI 98 (395)
T ss_pred cCCCeEEcCCCCC-CC---CCCHHHHHHHHHHHh--CCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cc
Confidence 3568999999986 22 234445555555544 23357799999999999999999876655556666 7888 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
|+++++.++ +..++.+||+|++++|+|+.+...++..|++++.+++ ++++ .+.+.+++++.....+..++++++|
T Consensus 99 G~~~~l~~~--~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~--~~~~~l~~~l~~~~~~~~~v~i~~p 173 (395)
T PRK08175 99 GSKEGLAHL--MLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPL-VEGV--DFFNELERAIRESYPKPKMMILGFP 173 (395)
T ss_pred CcHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEec-ccCC--CcHHHHHHHHhhccCCceEEEEeCC
Confidence 999999999 6777899999999999999999999999999999998 4332 3478888887653223458888899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||||.+++.+++++|+++|+++|++||+||+|.++.++.. ...++..+....+++|+++||||.||+||+|+||+++.
T Consensus 174 ~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~ 252 (395)
T PRK08175 174 SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW-KAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN 252 (395)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC-CCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC
Confidence 99999999999999999999999999999999999988532 22333443323467899999999999999999999864
No 56
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=8.9e-37 Score=277.22 Aligned_cols=223 Identities=15% Similarity=0.117 Sum_probs=181.2
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+.++|+|+.|.|... ..+ +++.+.++..+... .. ...|.+..|.++||+++++|+...++..+++++|++ |+|
T Consensus 28 ~~~~~i~l~~g~p~~~-~~~-p~~~~~~~~~~~~~-~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G 101 (398)
T PRK08363 28 KGIKVIRLNIGDPVKF-DFQ-PPEHMKEAYCRAIK-EG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV--TAA 101 (398)
T ss_pred cCCCeEEEeCCCCCcC-CCC-CCHHHHHHHHHHHH-cC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEE--eCC
Confidence 4568999999997211 222 34455555554442 12 346888999999999999998776666678899998 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEE-EeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTY-HYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
+++++.++ +.+++.+||+|++++|+|..+...++..|.+++.+ +. +++++.+|++.+++.+.+++ .+++++||
T Consensus 102 ~~~al~~~--~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~-~~~~~~~d~~~l~~~~~~~~---~~v~l~~p 175 (398)
T PRK08363 102 VTEALQLI--FGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTI-EEEGWQPDIDDIRKKITEKT---KAIAVINP 175 (398)
T ss_pred HHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccc-cccCCcCCHHHHHhhCCcce---EEEEEECC
Confidence 99999999 77778999999999999999999999999998888 44 55667789999999886543 37788899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
|||||.+++.+++++|+++|++++++||+||+|.++.++. ...++.++. ...++|+++||||.|++||+|+||+++
T Consensus 176 ~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~--~~~~~~~~~-~~~~vi~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 176 NNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG--KHVSPGSLT-KDVPVIVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC--cccCHHHcC-cCCcEEEEecchhccCCccceEEEEEE
Confidence 9999999999999999999999999999999999998853 223334442 345899999999999999999999997
No 57
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.1e-37 Score=276.53 Aligned_cols=221 Identities=15% Similarity=0.174 Sum_probs=179.3
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
++.|+|+.|++ ..+. ++.+.++..+... ....+|.+..|.++||+++++++....+..+++++|++ |+|++
T Consensus 33 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~ 103 (391)
T PRK08361 33 ENVISLGIGEP----DFDT-PKNIKEAAKRALD--EGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIV--TAGAY 103 (391)
T ss_pred cCeEEcCCCCC----CCCC-CHHHHHHHHHHHh--cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEE--eCChH
Confidence 47899999995 2223 3445444444441 22456989999999999999998654444567799998 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+++..+.++.+|++.+++.+.++++ +++++|||||
T Consensus 104 ~al~~~--~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~---~v~i~~p~NP 178 (391)
T PRK08361 104 EATYLA--FESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTR---MIVINYPNNP 178 (391)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccE---EEEEeCCCCC
Confidence 999999 77778999999999999999999999999999999983333578999999998876543 7788899999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
||.+++.+++++|+++|++++++||+||+|.++.++.. ...++..+ ..+++++++||||+||+||+|+||++++.
T Consensus 179 tG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~~~ 253 (391)
T PRK08361 179 TGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA-KHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIAPE 253 (391)
T ss_pred CCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC-CCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhccCH
Confidence 99999999999999999999999999999999987532 22233332 23589999999999999999999998753
No 58
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.3e-36 Score=271.68 Aligned_cols=216 Identities=15% Similarity=0.080 Sum_probs=176.5
Q ss_pred eeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecccchh
Q 023599 44 KLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCLSGSG 122 (280)
Q Consensus 44 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~g~~~ 122 (280)
+++|+.|.| + .+. .+.+.++.++.. . ...+|.+..|.++||+++++|+...++..++++ +|++ |+|+++
T Consensus 2 ~~~~~~g~p-~---~~~-~~~~~~~~~~~~--~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iii--t~Gs~~ 71 (350)
T TIGR03537 2 LFDFGTGDP-K---EPT-PPFIRKALIDAV--P-EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP--SAGSKE 71 (350)
T ss_pred eEeccCCCC-C---CCC-CHHHHHHHHHHH--h-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChHH
Confidence 578999985 2 223 344444444443 2 256799999999999999999977666666777 8998 999999
Q ss_pred HHHHHHHHHHhhcCC---CEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 123 SLRIGADFLAKHYYQ---HTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 123 al~~~~~~~~~~~~G---d~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
++.++ +..++.+| |+|+++.|+|..|...++..|++++.+++..++++.+|++.+++++.++++ ++++++||
T Consensus 72 ai~~~--~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~---~i~i~~p~ 146 (350)
T TIGR03537 72 AIFHF--PLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETK---IVWINYPH 146 (350)
T ss_pred HHHHH--HHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccE---EEEEeCCC
Confidence 99999 77778877 699999999999999999999999999983244577899999998876544 78888999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||||.+++.+++++|+++|+++|++||+||+|.++.++. ...++... ..+++|+++||||+||+||+|+||+++.
T Consensus 147 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~~ 221 (350)
T TIGR03537 147 NPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE--PPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAGD 221 (350)
T ss_pred CCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC--CCCchhhc--CcCCEEEEeecccccCCccccceeeecC
Confidence 999999999999999999999999999999999987752 22222322 2368999999999999999999999864
No 59
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.3e-36 Score=278.82 Aligned_cols=226 Identities=15% Similarity=0.177 Sum_probs=177.1
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhc----------cCCCCCCCCCCCCCHHHHHHHHHHHhCCCC--ccccC
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVN----------DLSADKEYLPITGLPEFNKLSAKLIFGADS--PAIKE 109 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~--~~~~~ 109 (280)
..+|+|+..+ |. ...+.+....+.... .......|.+..|.+.||+++|+++....+ .++++
T Consensus 47 ~g~i~l~~ae----N~--l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p 120 (447)
T PLN02607 47 SGVIQMGLAE----NQ--VSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDP 120 (447)
T ss_pred CceEEEechh----hh--hhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCH
Confidence 3599999988 53 233333333222110 011224488889999999999999976543 35788
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-HcCCeeeEEEeecCCCCCcCHHHHHHHHhcC--
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA-- 186 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~-- 186 (280)
++|++ |+|++++++++ +..++.|||.|+++.|+|+.|...+. ..|++++++++...+++.+|++.+++++.+.
T Consensus 121 ~~Ivi--t~G~t~al~~l--~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~ 196 (447)
T PLN02607 121 DRIVL--TAGATAANELL--TFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEA 196 (447)
T ss_pred HHeEE--cCChHHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHH
Confidence 99998 99999999999 77778999999999999999988877 5799999999833345789999999988641
Q ss_pred -CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhh------cCCeEEEEe
Q 023599 187 -PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVA------DGGECLVAQ 259 (280)
Q Consensus 187 -~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~------~~~~~i~~~ 259 (280)
..+.++++++|||||||.+++++++++|+++|++|+++||+||+|.++.|+. .+..++.++.. ..+++++++
T Consensus 197 ~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~-~~f~S~~s~~~~~~~~~~~~~v~vi~ 275 (447)
T PLN02607 197 ANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA-SEFVSVAEIVEARGYKGVAERVHIVY 275 (447)
T ss_pred hCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC-CCcccHHHHHhhcCCCCCcCcEEEEE
Confidence 2234578889999999999999999999999999999999999999998853 23444444422 146899999
Q ss_pred cccccccccccccceEEEE
Q 023599 260 SYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 260 S~SK~~~~~G~RvG~~v~~ 278 (280)
||||.||++|+|+||++..
T Consensus 276 s~SK~fg~~GlRvG~ivs~ 294 (447)
T PLN02607 276 SLSKDLGLPGFRVGTIYSY 294 (447)
T ss_pred cchhcCCCCcceEEEEEEc
Confidence 9999999999999999873
No 60
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-36 Score=273.19 Aligned_cols=221 Identities=17% Similarity=0.168 Sum_probs=177.6
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
+.++++|+.|.+ + .+.+ +.+.++.++.. . ...+|.+..|.++||+++++++. .++..+++++|++ |+|+
T Consensus 29 ~~~~i~l~~~~~-~---~~~~-~~~~~a~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~i~~--t~G~ 97 (397)
T PRK07568 29 GIKVYHLNIGQP-D---IKTP-EVFFEAIKNYD--E-EVLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEILI--TNGG 97 (397)
T ss_pred CCCEEEecCCCC-C---CCCC-HHHHHHHHHHh--c-CCcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcceEEE--cCCh
Confidence 357899999995 2 2233 44444444433 2 24679999999999999999987 3444567789988 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCC-cCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNG-LDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~-~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
++++.++ +..++.+||+|++++|+|..+...++..|++++.+++..++++. .+++.+++++.++++ ++++++||
T Consensus 98 ~~al~~~--~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~---~v~i~~p~ 172 (397)
T PRK07568 98 SEAILFA--MMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTK---AILISNPG 172 (397)
T ss_pred HHHHHHH--HHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccce---EEEEECCC
Confidence 9999999 66778899999999999999999999999999999983233333 367899988865543 78889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||||.+++.+++++|+++|++++++||+||+|.+|.++. ....++.++.+..+++|+++||||+|++||+|+||+++.
T Consensus 173 NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~-~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~ 250 (397)
T PRK07568 173 NPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDG-LKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISK 250 (397)
T ss_pred CCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCC-CCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecC
Confidence 999999999999999999999999999999999998853 233344554333579999999999999999999999874
No 61
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-36 Score=273.43 Aligned_cols=248 Identities=16% Similarity=0.177 Sum_probs=193.1
Q ss_pred ccccccccccCCChHHHHH---HHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHH
Q 023599 15 DSAFEQVARAADIPIYAVM---AAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEF 91 (280)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~l 91 (280)
|.+.+++...++..+.+.. +++. ...++.++|+.|++ + .+.+ +.+.++..+... .. ..+|.+..|.+.|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~-~---~~~~-~~~~~~~~~~~~-~~-~~~Y~~~~g~~~l 73 (393)
T PRK05764 2 MKLSKRVSRVTPSATLAVTAKAKELK-AQGRDVISLGAGEP-D---FDTP-EHIKEAAIEALD-DG-KTKYTPAAGIPEL 73 (393)
T ss_pred cchhhhhhhcCchHHHHHHHHHHHHH-hccCCEEEeCCCCC-C---CCCC-HHHHHHHHHHHh-cC-CCCcCCCCChHHH
Confidence 3455566666666654433 3332 23468899999996 2 2233 445444444331 22 4569999999999
Q ss_pred HHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCC
Q 023599 92 NKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKT 171 (280)
Q Consensus 92 r~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~ 171 (280)
|+++++++...++..+.+++|++ |+|+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+++..+++
T Consensus 74 r~~ia~~~~~~~~~~~~~~~i~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 149 (393)
T PRK05764 74 REAIAAKLKRDNGLDYDPSQVIV--TTGAKQALYNA--FMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENG 149 (393)
T ss_pred HHHHHHHHHHHhCCCCCHHHEEE--eCCcHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccC
Confidence 99999998665544466789988 99999999999 777789999999999999999999999999999999832345
Q ss_pred CCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHh-hh
Q 023599 172 NGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMF-VA 250 (280)
Q Consensus 172 ~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~ 250 (280)
+.+|++.+++++.++++ ++++++||||||.+++.+++++|+++|++|++++|+||+|.++.++.. ...++.++ .+
T Consensus 150 ~~~d~~~l~~~l~~~~~---~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~ 225 (393)
T PRK05764 150 FKLTVEQLEAAITPKTK---ALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA-EFTSIASLSPE 225 (393)
T ss_pred CcCCHHHHHHhhCccce---EEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC-CcccHHHcCCC
Confidence 78999999998865433 778899999999999999999999999999999999999999988532 22334444 23
Q ss_pred cCCeEEEEecccccccccccccceEEEE
Q 023599 251 DGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 251 ~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
...++++++||||.|+++|+|+||++..
T Consensus 226 ~~~~~i~~~s~SK~~~~~G~RiG~i~~~ 253 (393)
T PRK05764 226 LRDRTITVNGFSKAYAMTGWRLGYAAGP 253 (393)
T ss_pred CcCCEEEEecCcccccCccceeEEEecC
Confidence 4568999999999999999999999864
No 62
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-36 Score=272.84 Aligned_cols=217 Identities=19% Similarity=0.211 Sum_probs=170.9
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCC-CCCCCCCCCCCHHHHHHHHHHHhCCC--CccccCCCeEEeecc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLS-ADKEYLPITGLPEFNKLSAKLIFGAD--SPAIKENRVSTVQCL 118 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~G~~~lr~~ia~~l~~~~--~~~~~~~~i~~v~t~ 118 (280)
+..++|+.|++ +.++++...+...+.+. .. ....| +..|.++||+++++|+...+ +..+++++|++ |+
T Consensus 28 ~~~~~l~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~i--t~ 98 (374)
T PRK02610 28 IQLDRLDTNEF----PYDLPPDLKQKLAWLYQ--QGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISV--GN 98 (374)
T ss_pred cceeEecCCCC----CCCCCHHHHHHHHHHHh--hcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEE--cC
Confidence 35899999994 34455555555444433 22 12456 45799999999999987654 34567899998 99
Q ss_pred cchhHHHHHHHHHHhhcCCC-EEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC-CCCcEEEEec
Q 023599 119 SGSGSLRIGADFLAKHYYQH-TVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA-PSGAIVLLQA 196 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd-~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~~v~~~ 196 (280)
|+++++.++ +.+++.+|| +|++++|+|..|...++..|++++.+++ +++++++|++.+++++.+. ..+..+++++
T Consensus 99 Ga~~al~~~--~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~ 175 (374)
T PRK02610 99 GSDELIRSL--LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGR-DPETFEIDLAAAQSAIEQTQNPPVRVVFVV 175 (374)
T ss_pred ChHHHHHHH--HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecC-CcccCCCCHHHHHHHHHhhcCCCceEEEEe
Confidence 999999988 667777886 8999999999999999999999999998 5556899999999988641 1123488888
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEE
Q 023599 197 SGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALS 276 (280)
Q Consensus 197 ~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v 276 (280)
|||||||.+++.+++++++++| ++++||+||+|.+|.+. . .+..+ ....++|+++||||+||+||+|+||++
T Consensus 176 ~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~---~--~~~~~-~~~~~~ivi~SfSK~~g~~GlRiG~~v 247 (374)
T PRK02610 176 HPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT---T--LVGEL-AQHPNWVILRTFSKAFRLAAHRVGYAI 247 (374)
T ss_pred CCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc---c--hHHHH-hcCCCEEEEEecchhccCcccceeeee
Confidence 9999999999999999999876 49999999999998642 1 12233 234588999999999999999999998
Q ss_pred EE
Q 023599 277 VV 278 (280)
Q Consensus 277 ~~ 278 (280)
++
T Consensus 248 ~~ 249 (374)
T PRK02610 248 GH 249 (374)
T ss_pred cC
Confidence 75
No 63
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=259.09 Aligned_cols=223 Identities=14% Similarity=0.094 Sum_probs=191.0
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
+.++++|++.+ ||+. .+++.+++..+++. .+ .++|+ .+..++-+++++|...++...+.++.|++ ++|.
T Consensus 24 ~~DvlPmWVAD-MDf~---~pp~i~~Al~~rvd--hG-vfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~--~p~V 92 (388)
T COG1168 24 NEDVLPMWVAD-MDFP---TPPEIIEALRERVD--HG-VFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVF--VPGV 92 (388)
T ss_pred CCCcceeeeec-ccCC---CCHHHHHHHHHHHh--cC-CCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEE--cCcc
Confidence 36899999999 4776 55555555555655 44 46665 68889999999999999999889999888 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCC-CCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPK-TNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
..++.++ +..+.++||.|++..|.|+++.......|.++.+.|+..++ .+.+|++.|++++.+.. .+++++||||
T Consensus 93 Vpgi~~~--I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~--vkl~iLCnPH 168 (388)
T COG1168 93 VPGISLA--IRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER--VKLFILCNPH 168 (388)
T ss_pred hHhHHHH--HHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC--ccEEEEeCCC
Confidence 9999999 88889999999999999999999999999999999995333 37789999999998763 2499999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhh-cCCeEEEEecccccccccccccceEEEE
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVA-DGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||||.+++.+++++|.++|++||+.||+||+++++++.+. .+.++.++.+ ..+++|++.|.||+|+++|++++++|+.
T Consensus 169 NP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~-~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~ 247 (388)
T COG1168 169 NPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH-KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIIS 247 (388)
T ss_pred CCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC-CccchhhcChhhhcceEEEeeccccccchhhhheeEEec
Confidence 9999999999999999999999999999999999999643 4444444422 3569999999999999999999999987
Q ss_pred c
Q 023599 279 R 279 (280)
Q Consensus 279 ~ 279 (280)
+
T Consensus 248 n 248 (388)
T COG1168 248 N 248 (388)
T ss_pred C
Confidence 5
No 64
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=6.2e-37 Score=274.79 Aligned_cols=229 Identities=20% Similarity=0.230 Sum_probs=185.5
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHH-HHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCC-CeEEeecccc
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQ-LLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKEN-RVSTVQCLSG 120 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~g~ 120 (280)
++|+|+.|.+......+.+...++++.+ ... ......|++..|.++||+++++++.+.++...+++ +|++ ++|+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~--~~G~ 77 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAAT--SSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV--TSGA 77 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHH--HTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE--ESHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhc--ccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE--eccc
Confidence 6899999997443334445556666554 222 34467899999999999999999985666666777 8887 9998
Q ss_pred hhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC-C--CcEEEEec
Q 023599 121 SGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP-S--GAIVLLQA 196 (280)
Q Consensus 121 ~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-~--~~~~v~~~ 196 (280)
.+++.++ +..+ ..+||+|++++|+|+.|...++..|++++.+++..++++.+|++.|++.+++.. + +..+++++
T Consensus 78 ~~~~~~~--~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~ 155 (363)
T PF00155_consen 78 QAALFLL--LRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLIC 155 (363)
T ss_dssp HHHHHHH--HHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEE
T ss_pred ccchhhh--hhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeec
Confidence 8888888 5555 669999999999999999999999999999998556678999999999998741 1 24588899
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEE
Q 023599 197 SGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALS 276 (280)
Q Consensus 197 ~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v 276 (280)
+||||||.+++.+++++|+++|++++++||+||+|.++.++. .+..+.....+...++|+++||||+||++|+|+||++
T Consensus 156 ~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~ 234 (363)
T PF00155_consen 156 NPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGD-PDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIV 234 (363)
T ss_dssp SSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSS-SHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEE
T ss_pred ccccccccccccccccchhhhhcccccceeeeeceeccccCC-CccCcccccccccccceeeeecccccccccccccccc
Confidence 999999999999999999999999999999999999999963 2333333334455579999999999999999999999
Q ss_pred EE
Q 023599 277 VV 278 (280)
Q Consensus 277 ~~ 278 (280)
+.
T Consensus 235 ~~ 236 (363)
T PF00155_consen 235 AP 236 (363)
T ss_dssp EE
T ss_pred ch
Confidence 85
No 65
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.5e-37 Score=274.42 Aligned_cols=210 Identities=15% Similarity=0.115 Sum_probs=169.9
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
..++|+|+.|+ +..++++..++...+.+. . ..|+|..|.++||+++++++. +++++|++ |+|+
T Consensus 28 ~~~~i~l~~ne----n~~~~~~~v~~a~~~~~~--~---~~~Yp~~g~~~Lr~aia~~~~------~~~~~I~v--t~Gs 90 (366)
T PRK01533 28 DHSFVKLASNE----NPFGCSPRVLDELQKSWL--D---HALYPDGGATTLRQTIANKLH------VKMEQVLC--GSGL 90 (366)
T ss_pred CCceEEeCCCC----CCCCCCHHHHHHHHHHHH--h---cCcCCCCCHHHHHHHHHHHhC------CCcceEEE--CCCH
Confidence 45789999999 444455555555444433 1 235577899999999999972 35689998 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
++++.++ +..++.+||+|++++|+|..|...++..|++++.+++ + ++++|++.+++++.++++ +++++||||
T Consensus 91 ~e~i~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~-~--~~~~d~~~l~~~~~~~~~---~v~i~~P~N 162 (366)
T PRK01533 91 DEVIQII--SRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVAL-N--NGVYDLDEISSVVDNDTK---IVWICNPNN 162 (366)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeec-C--CCCcCHHHHHHHhCcCCc---EEEEeCCCC
Confidence 9999999 7777899999999999999999999999999999998 3 346999999998866544 788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||.+++.+++++|+++|++++ ++|+||+|.+|.++.. ..+.....+..+++|+++||||.||+||+|+||+++.
T Consensus 163 PTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~--~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~ 237 (366)
T PRK01533 163 PTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD--FPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH 237 (366)
T ss_pred CCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc--CcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC
Confidence 9999999999999999998876 5677999999887421 1122223344579999999999999999999999864
No 66
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=3.1e-36 Score=273.98 Aligned_cols=219 Identities=19% Similarity=0.186 Sum_probs=164.8
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhcc--CCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVND--LSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
.+.+.++|+.|++ ..++++...+...+.+... .....+|.|..|.++||+++|+++.+.+ +++++|++ |
T Consensus 31 ~~~~~i~l~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~---~~~d~I~i--t 101 (402)
T TIGR03542 31 PSADIIRLGIGDT----TQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGR---IDPEEIFI--S 101 (402)
T ss_pred CCCCeEEcCCCCC----CCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcC---CCHHHEEE--C
Confidence 3568999999985 2223333333322222210 1123569899999999999999875433 56799998 9
Q ss_pred ccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCC-----------eeeEEEeecCCCCCcCHHHHHHHHhcC
Q 023599 118 LSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGL-----------AMKTYHYYDPKTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~-----------~~~~v~~~~~~~~~~d~~~l~~~~~~~ 186 (280)
+|+++++.++ + .++.+||+|++++|+|..|...++..|+ +++++++..++++..|++. .+
T Consensus 102 ~Ga~~al~~l--~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~- 172 (402)
T TIGR03542 102 DGAKCDVFRL--Q-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EP- 172 (402)
T ss_pred CCcHHHHHHH--H-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cC-
Confidence 9999999876 3 4467999999999999999999999999 9999988323334444321 12
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
+..+++++|||||||.+++.+++++|+++|++++++||+||+|.+|.++.. ...++..+....+++|+++||||.||
T Consensus 173 --~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~g 249 (402)
T TIGR03542 173 --KIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS-LPHSIFEIPGAKECAIEFRSFSKTAG 249 (402)
T ss_pred --CceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC-CCcchhhCCCCcccEEEEecCccccC
Confidence 234777789999999999999999999999999999999999999988532 12233444323458999999999999
Q ss_pred ccccccceEEEEc
Q 023599 267 LYGERVGALSVVR 279 (280)
Q Consensus 267 ~~G~RvG~~v~~~ 279 (280)
+||+|+||++++.
T Consensus 250 ~pGlRiG~~i~~~ 262 (402)
T TIGR03542 250 FTGVRLGWTVVPK 262 (402)
T ss_pred CCCcceEEEEecH
Confidence 9999999999864
No 67
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.5e-36 Score=270.07 Aligned_cols=222 Identities=18% Similarity=0.240 Sum_probs=182.2
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccC-CCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDL-SADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
..++++|+.|.| .. .+++.+.++.....+.. ....+|.+..|.+.||+++++++...+...+++++|++ |+|
T Consensus 32 ~~~~~~l~~g~p----~~-~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~G 104 (394)
T PRK06836 32 ADNVFDFSLGNP----SV-PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVM--TCG 104 (394)
T ss_pred CCCeEEecCcCC----CC-CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEE--eCC
Confidence 356899999974 22 23455655555544221 22467989999999999999998766555667899998 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
+++++..+ +..++.+||.|++++|+|..+...++..|++++.+++ +++++++|++.+++++.++++ ++++++||
T Consensus 105 ~~~al~~~--~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~-~~~~~~~d~~~l~~~~~~~~~---~v~~~~p~ 178 (394)
T PRK06836 105 AAGALNVA--LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPT-DTDTFQPDLDALEAAITPKTK---AVIINSPN 178 (394)
T ss_pred hHHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEec-CCccCcCCHHHHHhhcCcCce---EEEEeCCC
Confidence 99999999 7777899999999999999999999999999999998 555678999999999966543 77888999
Q ss_pred CCCCCCCCHHHHHHHHHHHHh------CCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccc
Q 023599 200 NPTGIDPTAQQWEQIRQLMRL------KRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVG 273 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~------~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 273 (280)
||||.+++.+++++|+++|++ |+++||+||+|.++.++.. ...++ ....+++++++||||+|++||+|+|
T Consensus 179 NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~---~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 179 NPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA-EVPYI---FKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC-CCCCh---HHccCcEEEEecchhhccCcceeeE
Confidence 999999999999999999999 8999999999999988532 22222 2234689999999999999999999
Q ss_pred eEEEEc
Q 023599 274 ALSVVR 279 (280)
Q Consensus 274 ~~v~~~ 279 (280)
|+++..
T Consensus 255 ~~~~~~ 260 (394)
T PRK06836 255 YIAVNP 260 (394)
T ss_pred EEecCH
Confidence 998753
No 68
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-36 Score=279.71 Aligned_cols=214 Identities=12% Similarity=0.053 Sum_probs=165.9
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCC-Ccc-cc--CCCeEEeecc
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGAD-SPA-IK--ENRVSTVQCL 118 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~-~~~-~~--~~~i~~v~t~ 118 (280)
++|+|+.|+| +.+ .+. .+.++.+.+. . .+|+++.|.++||+++++++..+. ... .. +++|++ |+
T Consensus 101 ~~i~l~~g~p-~~~---~~~-~v~e~~~~~~--~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v--T~ 168 (527)
T PRK09275 101 DAVSYVRDQL-GFD---ADE-FVYELVDGII--G---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA--VE 168 (527)
T ss_pred HHHhhcCCCC-CCC---CCH-HHHHHHHHHh--c---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eC
Confidence 5799999996 443 433 3333555554 2 259999999999999999654432 111 12 348887 99
Q ss_pred cchhHHHHHHHHHH-----hhcCCCEEEEeCCCCCChHHHHHHcCC--eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcE
Q 023599 119 SGSGSLRIGADFLA-----KHYYQHTVYLSQPTYGNHPNFFAAAGL--AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAI 191 (280)
Q Consensus 119 g~~~al~~~~~~~~-----~~~~Gd~Vli~~P~y~~~~~~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 191 (280)
|+++|+..+ +.+ ++.|||+|++++|+|+.|...++..|+ +++.++...+++|.+|.+.+++++.++++
T Consensus 169 Ga~~al~~~--~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tk--- 243 (527)
T PRK09275 169 GGTAAMCYI--FDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIK--- 243 (527)
T ss_pred CHHHHHHHH--HHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCC---
Confidence 999999999 554 678999999999999999999887754 55555552234588999999998766555
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHh--CCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccc
Q 023599 192 VLLQASGHNPTGIDPTAQQWEQIRQLMRL--KRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYG 269 (280)
Q Consensus 192 ~v~~~~p~NPTG~~~~~~~l~~i~~~~~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 269 (280)
+++++|||||||.+++.+++++|+++|++ ++++||+||+|.+|.++ ..++... ..+++|+++||||+|+++|
T Consensus 244 ai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~----~~s~~~~--~~~~~I~v~SfSK~f~mtG 317 (527)
T PRK09275 244 ALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD----FRSLFAV--LPYNTILVYSFSKYFGATG 317 (527)
T ss_pred EEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc----ccCHHHh--CCCCEEEEeehhhhccCcH
Confidence 88888999999999999999999999964 59999999999998763 1222222 3469999999999999999
Q ss_pred cccceEEEEc
Q 023599 270 ERVGALSVVR 279 (280)
Q Consensus 270 ~RvG~~v~~~ 279 (280)
||+||+++..
T Consensus 318 ~RlG~i~~~~ 327 (527)
T PRK09275 318 WRLGVIALHE 327 (527)
T ss_pred hHHhhhhcCc
Confidence 9999998754
No 69
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=9.8e-36 Score=266.30 Aligned_cols=224 Identities=12% Similarity=0.108 Sum_probs=169.1
Q ss_pred ChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcc
Q 023599 27 IPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPA 106 (280)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~ 106 (280)
..+.+..++... ...++++|+.|++ ....+...++...+.+. ...+|++ .+.++||+++++|+.
T Consensus 5 ~~~~~~~~~~~~-~~~~~~~l~~~~~----~~~~p~~~~~a~~~~~~----~~~~Y~~-~~~~~lr~~ia~~~~------ 68 (354)
T PRK06358 5 GNINEIAREKGL-TKNMILDFSANIN----PLGVPESLKQAITENLD----KLVEYPD-PDYLELRKRIASFEQ------ 68 (354)
T ss_pred ccHHHHHHHhCC-CccceEEecCCCC----CCCCCHHHHHHHHHHHH----hhhcCCC-ccHHHHHHHHHHHhC------
Confidence 344455555432 3346899999883 33334444443333322 1345654 578999999999972
Q ss_pred ccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC
Q 023599 107 IKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 107 ~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 186 (280)
+++++|++ |+|+++++.++ +..+ .+ +.|++++|+|+.|...++..|++++.+++..+.++.+| +.+++.+.++
T Consensus 69 ~~~~~i~i--t~Ga~~~l~~~--~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~ 141 (354)
T PRK06358 69 LDLENVIL--GNGATELIFNI--VKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEE 141 (354)
T ss_pred CChhhEEE--CCCHHHHHHHH--HHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccC
Confidence 45799998 99999999998 5543 44 68999999999999999999999999998323457888 6666666444
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
++ +++++|||||||.+++.+++++|+++|++++++||+||+|.+|.++.. . .+.....+..+++|+++||||+||
T Consensus 142 ~~---~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~-~~~~~~~~~~~~vi~~~S~SK~~g 216 (354)
T PRK06358 142 ID---LVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENE-T-ISMINYLENFKNLIIIRAFTKFFA 216 (354)
T ss_pred CC---EEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCcc-c-hhHHHhccCCCCEEEEEechhhcc
Confidence 33 777889999999999999999999999999999999999999998632 2 222223344579999999999999
Q ss_pred ccccccceEEEE
Q 023599 267 LYGERVGALSVV 278 (280)
Q Consensus 267 ~~G~RvG~~v~~ 278 (280)
+||+|+||++++
T Consensus 217 l~G~RiG~lv~~ 228 (354)
T PRK06358 217 IPGLRLGYGLTS 228 (354)
T ss_pred CcchhheeeecC
Confidence 999999999874
No 70
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-35 Score=264.93 Aligned_cols=223 Identities=18% Similarity=0.133 Sum_probs=172.1
Q ss_pred ChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcc
Q 023599 27 IPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPA 106 (280)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~ 106 (280)
..+.+.++++.. ...++|+|+.|+. ...+++...++..+.+. . ..+|+ ..|.+.||+++++++.
T Consensus 16 ~~~~~~~~~~~~-~~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~---~-~~~Y~-~~~~~~lr~~ia~~~~------ 79 (357)
T PRK14809 16 RGIEEVARELGL-DPDDLVKLSSNEN----PHGPSPAAVEAIREAAE---R-VHSYP-KASHADLTAALADRWD------ 79 (357)
T ss_pred CCHHHHHHHhCC-CccceeEecCCCC----CCCCCHHHHHHHHHHHh---h-hhcCC-CCCHHHHHHHHHHHhC------
Confidence 345556666533 3457999999984 33344444444433332 1 34575 5789999999999972
Q ss_pred ccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC
Q 023599 107 IKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 107 ~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 186 (280)
+++++|++ |+|+++++.++ +.+++.+||+|++++|+|..|....+..|++++.+++..++++.++.+.+++... +
T Consensus 80 ~~~~~I~i--t~G~~~al~~~--~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-~ 154 (357)
T PRK14809 80 VSPEQVWL--ANGGDGALDYL--ARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD-G 154 (357)
T ss_pred CCcceEEE--CCCHHHHHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-C
Confidence 45689988 99999999999 7777899999999999999898888889999999998333457778887777542 2
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
++ +++++|||||||.+++.+++++|+++|++ +++||+||+|.+|.++. . .+. ..+..+++|+++||||+||
T Consensus 155 ~k---~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~--~--~~~-~~~~~~~vi~~~SfSK~~~ 225 (357)
T PRK14809 155 ER---IVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP--S--AVA-LVEERDDVAVLRTFSKAYG 225 (357)
T ss_pred Cc---EEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc--h--hHH-HHhhCCCEEEEecchhHhc
Confidence 33 77788999999999999999999999975 78999999999998742 1 122 2234569999999999999
Q ss_pred ccccccceEEEEc
Q 023599 267 LYGERVGALSVVR 279 (280)
Q Consensus 267 ~~G~RvG~~v~~~ 279 (280)
+||+|+||++++.
T Consensus 226 ~~GlRiG~~~~~~ 238 (357)
T PRK14809 226 LAGLRLGYAVVPE 238 (357)
T ss_pred CcchhheeeecCH
Confidence 9999999999763
No 71
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-35 Score=266.56 Aligned_cols=217 Identities=16% Similarity=0.122 Sum_probs=171.5
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
..++|+.|++ ..++++..++...+.+.........| +..|.+.||+++++|+...++..+++++|++ |+|+++
T Consensus 27 ~~i~l~~~~~----~~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~i--t~G~~~ 99 (368)
T PRK03317 27 VPVRLNTNEN----PYPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWA--ANGSNE 99 (368)
T ss_pred ceeEecCCCC----CCCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEE--CCCHHH
Confidence 5699999984 33344444444333333111223456 5568999999999999877666678899998 999999
Q ss_pred HHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCC
Q 023599 123 SLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPT 202 (280)
Q Consensus 123 al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPT 202 (280)
++.++ +.+++.+||.|+++.|+|..|...++..|.+++.++. .+++++|++.+++++.+.. ..+++++||||||
T Consensus 100 ~l~~~--~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~--~~~i~l~~p~NPt 173 (368)
T PRK03317 100 ILQQL--LQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHR--PDVVFLTSPNNPT 173 (368)
T ss_pred HHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccC--CCEEEEeCCCCCC
Confidence 99999 7788899999999999999999999999999888886 3457899999999987532 2267788999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 203 GIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 203 G~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|.+++.+++++|+++| +++||+||+|.+|.++.. .+...+.+..+++|+++||||.||++|+|+||+++.
T Consensus 174 G~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~---~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~ 243 (368)
T PRK03317 174 GTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT---PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA 243 (368)
T ss_pred CCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC---cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC
Confidence 9999999999988877 689999999999976532 122333344458999999999999999999999865
No 72
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1e-35 Score=272.83 Aligned_cols=211 Identities=17% Similarity=0.171 Sum_probs=167.6
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
...++|+.|.| +.+ .+ +.+.++..+.. .. ...|++..|.++||+++++|+..... .+++|++ |+|++
T Consensus 85 ~~~i~L~~g~p-~~~---~~-p~~~~~~~~~~--~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iii--t~G~~ 151 (431)
T PRK15481 85 TPLHDLAGGNP-DPQ---RL-PDLSRYFARLS--RT-PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDL--TSGAI 151 (431)
T ss_pred chhhhhhcCCC-Chh---Hh-HHHHHHHHHhh--hh-hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEE--ecCcH
Confidence 35789999985 222 22 23444444433 11 35699999999999999999754322 2468888 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++.++ +.+++.+||.|++++|+|..|...++..|++++.+++ +++ ++|++.+++++.++++ ++++++|||||
T Consensus 152 ~al~~~--~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~--g~~~~~l~~~~~~~~k--~i~~~p~p~NP 224 (431)
T PRK15481 152 DAIERL--LCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSV-DAE--GMQPEKLERALAQGAR--AVILTPRAHNP 224 (431)
T ss_pred HHHHHH--HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeecc-CCC--CCCHHHHHHHHhcCCC--EEEECCCCCCC
Confidence 999999 7788899999999999999999999999999999998 443 5899999999876433 34444599999
Q ss_pred CCCCCCHHHHHHHHHHHHhC-CceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 202 TGIDPTAQQWEQIRQLMRLK-RLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||.+++.+++++|+++|+++ +++||+||+|.+|.++.. . +. +....+++|+++||||+|+ ||+|+||++++
T Consensus 225 TG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~-~~--~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~ 296 (431)
T PRK15481 225 TGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY--H-SV--IPQTTQRWALIRSVSKALG-PDLRLAFVASD 296 (431)
T ss_pred CCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC--C-CC--CcCCCCCEEEEeeeccccC-CCceeEEEeCC
Confidence 99999999999999999999 999999999999987421 1 11 1112359999999999999 99999999875
No 73
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-35 Score=247.48 Aligned_cols=263 Identities=62% Similarity=1.045 Sum_probs=247.9
Q ss_pred ccccccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHH
Q 023599 15 DSAFEQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKL 94 (280)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ 94 (280)
.++|++++.+|+++|+.+...++.+.++..|||++|.+.|.++.|.+.+.+++|.+++.. .....+|.|..|+++|.+.
T Consensus 25 ~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~-~~ldKEYlpI~Gl~eF~k~ 103 (427)
T KOG1411|consen 25 SSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLAS-LSLDKEYLPITGLAEFNKL 103 (427)
T ss_pred cchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhh-hcccchhccccchHHHHHH
Confidence 369999999999999999999999999999999999999999999999999999999885 5567789999999999999
Q ss_pred HHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCc
Q 023599 95 SAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGL 174 (280)
Q Consensus 95 ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 174 (280)
.+++.++.++..+...+|..++|.+||+|+.+.+.|++..-++..|.+|+|+|.++..++...|..+.++..+++.+.++
T Consensus 104 sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gl 183 (427)
T KOG1411|consen 104 SAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGL 183 (427)
T ss_pred HHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeecccccccc
Confidence 99999999999899999999999999999999999999989999999999999999999999999999999988999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc-CcCCChhHHHHhhhcCC
Q 023599 175 DFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM-NMDADALPVRMFVADGG 253 (280)
Q Consensus 175 d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~ 253 (280)
|++.+.+.+.+.+....++++...|||||+-.+.+++++|.++.++.+.+-+.|-+|+.|.. +...++.+++.+.+.+.
T Consensus 184 d~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~ 263 (427)
T KOG1411|consen 184 DFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH 263 (427)
T ss_pred chHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC
Confidence 99999999998888888999999999999999999999999999999999999999999988 55678889999988888
Q ss_pred eEEEEecccccccccccccceEEEE
Q 023599 254 ECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 254 ~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+++...||.|..|+.|.|+|.+.+.
T Consensus 264 ~~~laQSyAKNMGLYgERvGa~svv 288 (427)
T KOG1411|consen 264 EILLAQSYAKNMGLYGERVGALSVV 288 (427)
T ss_pred ceEeehhhhhhcchhhhccceeEEE
Confidence 9999999999999999999998654
No 74
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=3.7e-35 Score=263.60 Aligned_cols=234 Identities=13% Similarity=0.046 Sum_probs=175.4
Q ss_pred ccccccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHH
Q 023599 15 DSAFEQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKL 94 (280)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ 94 (280)
|.+.++++..+...+......... ...++++|+.|.| +. +. .+.+.++..... . ..+|.+..|.++||++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~p-~~---~~-~~~~~~~~~~~~--~--~~~Y~~~~G~~~lr~~ 70 (364)
T PRK07865 1 MPVSARLPDFPWDTLAPAKATAAA-HPDGIVDLSVGTP-VD---PV-PPVIQEALAAAA--D--APGYPTTAGTPELREA 70 (364)
T ss_pred CCccccCCCccHHHHHHHHHHHHh-cCCCEEEcCCCCC-CC---CC-CHHHHHHHHHHH--h--hCCCCCccCCHHHHHH
Confidence 445566776666666555444433 3457899999986 22 22 344544444433 1 2479989999999999
Q ss_pred HHHHHhCCCCcc-ccCCCeEEeecccchhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCC
Q 023599 95 SAKLIFGADSPA-IKENRVSTVQCLSGSGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTN 172 (280)
Q Consensus 95 ia~~l~~~~~~~-~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 172 (280)
+++|+...++.. +++++|++ |+|+++++.++ +..+ +.+||+|++++|+|..|...++..|++++.++.
T Consensus 71 ia~~l~~~~~~~~~~~~~I~i--t~G~~~~i~~~--~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~------ 140 (364)
T PRK07865 71 IVGWLARRRGVTGLDPAAVLP--VIGSKELVAWL--PTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS------ 140 (364)
T ss_pred HHHHHHHHcCCCCCCcccEEE--ccChHHHHHHH--HHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC------
Confidence 999997765554 67899998 99999999988 5555 689999999999999999999999998887752
Q ss_pred CcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHh--hh
Q 023599 173 GLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMF--VA 250 (280)
Q Consensus 173 ~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~ 250 (280)
++.++. + +..+++++|||||||.+++.+++++|+++|++++++||+||+|.++.++. .....+... ..
T Consensus 141 ---~~~l~~---~---~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~ 210 (364)
T PRK07865 141 ---LTELGP---Q---RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDA-EPVSILDPRVCGG 210 (364)
T ss_pred ---hhhCCc---c---cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCC-CCCccccccccCC
Confidence 122211 2 23477788999999999999999999999999999999999999998853 111111110 01
Q ss_pred cCCeEEEEecccccccccccccceEEEE
Q 023599 251 DGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 251 ~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+++|+++||||.|++||+|+||++.+
T Consensus 211 ~~~~~i~~~S~SK~~~~~GlRiG~i~~~ 238 (364)
T PRK07865 211 DHTGLLAVHSLSKQSNLAGYRAGFVAGD 238 (364)
T ss_pred ccceEEEEeechhccCCCceeeEEEecC
Confidence 2358999999999999999999999864
No 75
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.3e-35 Score=271.83 Aligned_cols=213 Identities=11% Similarity=0.045 Sum_probs=164.1
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHH-HHhCCCCcc-ccCC--CeEEeecc
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAK-LIFGADSPA-IKEN--RVSTVQCL 118 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~-~l~~~~~~~-~~~~--~i~~v~t~ 118 (280)
++|+|+.|+| +.+ +.+.+.++.+.+. . .+|+++.|...+++++++ |+....... ..++ +|++ |.
T Consensus 95 ~~i~l~~g~p----~~~-~~~~~~~~~~~~~--~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~i--t~ 162 (521)
T TIGR03801 95 DIISYVIDQL----GFD-PDAFLYEMCDGII--G---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFA--VE 162 (521)
T ss_pred HHHhhcCCCC----CCC-CCHHHHHHHHHhh--c---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eC
Confidence 5799999996 333 3455555555543 1 258777788888888885 444332221 2333 7887 99
Q ss_pred cchhHHHHHHHHHH-----hhcCCCEEEEeCCCCCChHHHHHHc--CCeeeEEEeecCCC-----CCcCHHHHHHHHhcC
Q 023599 119 SGSGSLRIGADFLA-----KHYYQHTVYLSQPTYGNHPNFFAAA--GLAMKTYHYYDPKT-----NGLDFQGMLQDLGAA 186 (280)
Q Consensus 119 g~~~al~~~~~~~~-----~~~~Gd~Vli~~P~y~~~~~~~~~~--G~~~~~v~~~~~~~-----~~~d~~~l~~~~~~~ 186 (280)
|+++|+..+ +.+ ++.|||+|++++|+|+.|...++.. |++++.++...+.+ |.+|.+.++++..++
T Consensus 163 Gat~al~~~--~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~ 240 (521)
T TIGR03801 163 GGTAAMCYI--FDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPS 240 (521)
T ss_pred CHHHHHHHH--HHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCC
Confidence 999999998 544 6789999999999999999987765 67788888732222 789999999877655
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhC--CceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLK--RLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~--~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
++ +++++|||||||.+++.+++++|+++|++| +++||+||+|.+|.++ ..++.+. ..+++|+++||||+
T Consensus 241 ~k---ai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~----~~sl~~~--~~~~vI~v~SfSK~ 311 (521)
T TIGR03801 241 IK---ALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD----FRSLFAE--LPYNTIGVYSFSKY 311 (521)
T ss_pred Cc---EEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc----ccchhhh--CCCCEEEEEcchhh
Confidence 44 888889999999999999999999999986 8999999999998863 1222332 33699999999999
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
||++|||+||+++.
T Consensus 312 fg~~G~RlG~i~~~ 325 (521)
T TIGR03801 312 FGATGWRLGTIALH 325 (521)
T ss_pred ccCchhhhhhhhcC
Confidence 99999999999875
No 76
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.1e-34 Score=257.96 Aligned_cols=224 Identities=15% Similarity=0.171 Sum_probs=169.9
Q ss_pred CCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q 023599 25 ADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADS 104 (280)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~ 104 (280)
+++++...+.++.. +..++++|+.|+ +..+++...+++..+.+. . ...|+ ..+.++||+++++++.
T Consensus 4 ~~~~~~~~~~~~~~-~~~~~i~l~~~~----~~~~~p~~~~~a~~~~~~--~--~~~y~-~~~~~~lr~~ia~~~~---- 69 (356)
T PRK08056 4 HGGNIREAATVLGI-SPDQLLDFSANI----NPLGMPVSLKRAIIDNLD--C--AERYP-DVEYRHLHQALARHHQ---- 69 (356)
T ss_pred CCccHHHHHHHhCC-ChhhEEEecccc----CCCCCCHHHHHHHHHHHH--h--cccCc-CccHHHHHHHHHHHhC----
Confidence 45667676766643 446789999998 344455555554444333 1 23464 4578999999999962
Q ss_pred ccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHh
Q 023599 105 PAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLG 184 (280)
Q Consensus 105 ~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~ 184 (280)
+++++|++ |+|+++++.++ +..+ .+|+ +++++|+|..|...++..|++++.+++.+++++.+| +.+++.+.
T Consensus 70 --~~~~~i~i--t~Ga~~~l~~~--~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~ 140 (356)
T PRK08056 70 --VPASWILA--GNGETESIFAV--VSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT 140 (356)
T ss_pred --cChhhEEE--CCCHHHHHHHH--HHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc
Confidence 34689988 99999999988 5543 6775 778899999999999999999999998323345566 34555565
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 185 AAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
++++ +++++|||||||.+++.+++++|+++|++++++||+||+|.+|.++. ....+ .....+++++++||||+
T Consensus 141 ~~~k---~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~---~~~~~~~~i~~~S~SK~ 213 (356)
T PRK08056 141 PDLD---CLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE-TGFIP---QLADNPHLWVLRSLTKF 213 (356)
T ss_pred CCCC---EEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc-hHHHH---HhccCCCEEEEEechhh
Confidence 4443 78889999999999999999999999999999999999999998752 11111 12334689999999999
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
||++|+|+||++++
T Consensus 214 ~~~~G~RiG~~v~~ 227 (356)
T PRK08056 214 YAIPGLRLGYLVNS 227 (356)
T ss_pred ccCcchhheeeecC
Confidence 99999999999874
No 77
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.6e-35 Score=260.75 Aligned_cols=209 Identities=17% Similarity=0.167 Sum_probs=167.3
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
.++++|+.|++ ....+ +.+.++..+... ...|+|..|.++||+++++++. +.+++|++ |+|++
T Consensus 29 ~~~i~l~~n~~----~~~~~-~~v~~a~~~~~~----~~~~~p~~g~~~lr~~ia~~~~------~~~~~i~~--t~G~~ 91 (359)
T PRK03158 29 EKIVKLASNEN----PYGPS-PKVKEAIAAHLD----ELALYPDGYAPELRTKVAKHLG------VDEEQLLF--GAGLD 91 (359)
T ss_pred CceEEecCCCC----CCCCC-HHHHHHHHHHHH----HhhcCCCCcHHHHHHHHHHHhC------CCHHHEEE--CCCHH
Confidence 37899999984 22233 334444443321 2457788899999999999972 24588988 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++..+ +.+++.+||+|++++|+|+.|...+...|++++.+++ + ++++|++.+++.+.++++ +++++|||||
T Consensus 92 ~~l~~~--~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~-~--~~~~d~~~l~~~~~~~~~---~v~i~~p~NP 163 (359)
T PRK03158 92 EVIQMI--SRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPL-K--DGGHDLEAMLKAIDEQTK---IVWICNPNNP 163 (359)
T ss_pred HHHHHH--HHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEec-C--CCCcCHHHHHHhcCCCCC---EEEEeCCCCC
Confidence 999988 6677889999999999999999999999999999998 3 457899999988865544 7778999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||.+++.+++.++++.|+ ++++||+||+|.++.++... ++.....+..+++|+++||||.||+||+|+||++++
T Consensus 164 tG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~ 237 (359)
T PRK03158 164 TGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDY--PDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS 237 (359)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCccc--ccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC
Confidence 999999999999998875 69999999999999875321 112223344568999999999999999999999875
No 78
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-34 Score=237.76 Aligned_cols=266 Identities=51% Similarity=0.895 Sum_probs=246.8
Q ss_pred CccccccccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHH
Q 023599 14 GDSAFEQVARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNK 93 (280)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~ 93 (280)
+|++|..++..++..++.+.+.|.++..+..++|++|.+.+..+.|++.+.++++...+..+....++|.|..|.+.|++
T Consensus 2 ~~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~ 81 (410)
T KOG1412|consen 2 SMSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTK 81 (410)
T ss_pred CcchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhh
Confidence 57899999999999999999999888888999999999999999999999999999999877777899999999999999
Q ss_pred HHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcC-CeeeEEEeecCCCC
Q 023599 94 LSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAG-LAMKTYHYYDPKTN 172 (280)
Q Consensus 94 ~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G-~~~~~v~~~~~~~~ 172 (280)
+.++.+.+.+...+.++++.-|++.+|++|+.+.+.+++..-...+|.++.|+|.++..++...| ..+..++.++.++.
T Consensus 82 ~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k 161 (410)
T KOG1412|consen 82 AATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENK 161 (410)
T ss_pred hhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCc
Confidence 99999999999999999999999999999999999999887788899999999999999999999 46888999888888
Q ss_pred CcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc-CcCCChhHHHHhhhc
Q 023599 173 GLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM-NMDADALPVRMFVAD 251 (280)
Q Consensus 173 ~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~ 251 (280)
.+|++.+...++..+...++++....|||||.-.+.+++++|++..++.+++.+.|-+|+.|.. |.+.+.+.++.+.+.
T Consensus 162 ~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~ 241 (410)
T KOG1412|consen 162 CVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQ 241 (410)
T ss_pred eecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhc
Confidence 9999999999998887777777777799999999999999999999999999999999999988 667899999999998
Q ss_pred CCeEEEEecccccccccccccceEEEEc
Q 023599 252 GGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 252 ~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
+..+++..||+|.||+.|-|+|.+.++.
T Consensus 242 g~e~fv~QSFaKNfGlYneRvGnltvv~ 269 (410)
T KOG1412|consen 242 GFELFVCQSFAKNFGLYNERVGNLTVVV 269 (410)
T ss_pred CCeEEEEhhhhhhcccccccccceEEEe
Confidence 8889999999999999999999987753
No 79
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-34 Score=260.15 Aligned_cols=211 Identities=21% Similarity=0.183 Sum_probs=169.1
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
..++|+|+.|++ ... +.+.+.++..+.. . ...+|++..| .+||+++++++. +++++|++ |+|+
T Consensus 35 ~~~~i~l~~~~~----~~~-~~~~~~~al~~~~--~-~~~~Y~~~~g-~~lr~~ia~~~~------~~~~~i~~--t~G~ 97 (371)
T PRK05166 35 VPRIAKLGSNEN----PLG-PSPAVRRAFADIA--E-LLRLYPDPQG-RALREAIAARTG------VPADRIIL--GNGS 97 (371)
T ss_pred CcceEEcCCCCC----CCC-CCHHHHHHHHHHH--H-HhhcCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCH
Confidence 457899999984 222 3344555444433 1 2456988888 489999999862 24588988 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
++++.++ +.+++.+||+|+++.|+|..+...++..|++++.+++ + .++++|++.+++.+.++++ +++++||||
T Consensus 98 ~~~l~~~--~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~-~-~~~~~~~~~l~~~~~~~~~---~v~l~~p~N 170 (371)
T PRK05166 98 EDLIAVI--CRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTV-T-PDLGFDLDALCAAVARAPR---MLMFSNPSN 170 (371)
T ss_pred HHHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeec-C-CCCCCCHHHHHHhhhcCCC---EEEEeCCCC
Confidence 9999999 6677899999999999999999999999999999998 3 3468999999998876654 778899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH-hhhcCCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM-FVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||.+++.+++++|+++|++ +++||+||+|.+|.++. ..++... +.+..+++|+++||||.||+||+|+||+++.
T Consensus 171 PtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 171 PVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGD--DYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCc--CcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 99999999999999999874 88999999999999642 2222222 2234468999999999999999999998764
No 80
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-34 Score=260.45 Aligned_cols=216 Identities=18% Similarity=0.133 Sum_probs=166.9
Q ss_pred hHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccc
Q 023599 28 PIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAI 107 (280)
Q Consensus 28 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~ 107 (280)
.+.+.++++.. ...++|+|+.|+. ..++++. +.++..... ....| |..+.++||+++++++. +
T Consensus 39 ~~~~~~~~~~~-~~~~~i~l~~n~~----p~~~~~~-v~~a~~~~~----~~~~Y-p~~~~~~lr~~ia~~~~------~ 101 (380)
T PLN03026 39 PFEVLSAQLGR-KPEDIVKLDANEN----PYGPPPE-VLEALGNMK----FPYVY-PDPESRRLRAALAEDSG------L 101 (380)
T ss_pred ChHHHHHHhCC-CccceEEccCCCC----CCCCCHH-HHHHHHhhH----hhccC-CCCCHHHHHHHHHHHhC------c
Confidence 34444444422 3458999999983 3334444 433333321 12335 45678999999999973 3
Q ss_pred cCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHH-hcC
Q 023599 108 KENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDL-GAA 186 (280)
Q Consensus 108 ~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~-~~~ 186 (280)
.+++|++ |+|+++++.++ +..++.+||+|++++|+|..|...++..|++++.+++ .+++.+|++.+++++ .++
T Consensus 102 ~~~~I~~--t~Ga~~~i~~~--~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~~~~~~ 175 (380)
T PLN03026 102 ESENILV--GCGADELIDLL--MRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPR--TPDFSLDVPRIVEAVETHK 175 (380)
T ss_pred ChhhEEE--cCCHHHHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHHhccC
Confidence 4688988 99999999999 7777889999999999999999999999999999998 345789999999988 444
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
++ +++++|||||||.+++.+++++|++.+ ++||+||+|.+|.++. .. ....+..+++|+++||||.||
T Consensus 176 ~~---~v~l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~--~~---~~~~~~~~~viv~~SfSK~~g 243 (380)
T PLN03026 176 PK---LLFLTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE--SR---MKWVKKYDNLIVLRTFSKRAG 243 (380)
T ss_pred Cc---EEEEeCCCCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc--ch---HHHHHhCCCEEEEecchHhhc
Confidence 44 888899999999999999999988753 8999999999998742 11 122334579999999999999
Q ss_pred ccccccceEEEE
Q 023599 267 LYGERVGALSVV 278 (280)
Q Consensus 267 ~~G~RvG~~v~~ 278 (280)
++|+|+||++..
T Consensus 244 laGlRiGy~~~~ 255 (380)
T PLN03026 244 LAGLRVGYGAFP 255 (380)
T ss_pred CccccceeeecC
Confidence 999999999875
No 81
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.3e-34 Score=258.79 Aligned_cols=206 Identities=19% Similarity=0.128 Sum_probs=165.0
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
++.++|+.|+ ++.++++..+++..+.+. . ...|++. +.++||+++++++. +++++|++ |+|++
T Consensus 43 ~~~i~l~~~~----~~~~~~~~~~~a~~~~~~--~--~~~Y~~~-~~~~Lr~aia~~~~------v~~e~I~i--t~Gs~ 105 (370)
T PRK09105 43 EGAVFLNANE----CPLGPSPAARDAAARSAA--L--SGRYDLE-LEDDLRTLFAAQEG------LPADHVMA--YAGSS 105 (370)
T ss_pred CCcEEecCCC----CCCCCCHHHHHHHHHHHH--H--hcCCCCc-hHHHHHHHHHHHhC------cChhhEEE--cCChH
Confidence 5679999998 344455555555444433 1 2346554 58999999999852 35689998 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++.++ +..++.+||+|++++|+|..|...++..|++++.+++ + +++.+|++.+++. .++++ +++++|||||
T Consensus 106 ~ai~~~--~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~-~~~~~---~v~l~nP~NP 177 (370)
T PRK09105 106 EPLNYA--VLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPL-R-ADGAHDVKAMLAA-DPNAG---LIYICNPNNP 177 (370)
T ss_pred HHHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecC-C-CCCCCCHHHHHhc-CCCCC---EEEEeCCCCC
Confidence 999999 7777899999999999999999999999999999998 3 3577899999876 33333 8888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||.+++.++++++++.++ ++++||+||+|.+|... ++...+.+..+++++++||||+||++|||+||++++
T Consensus 178 TG~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~-----~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 248 (370)
T PRK09105 178 TGTVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA-----PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR 248 (370)
T ss_pred CCcCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC-----cchHHHHhhCCCEEEEecccHhhcCCccceeeeecC
Confidence 999999999999999764 69999999999887542 122344455679999999999999999999999975
No 82
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.2e-34 Score=262.91 Aligned_cols=219 Identities=18% Similarity=0.104 Sum_probs=165.2
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccC---CCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDL---SADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
.+++|+|+.|.| ...+.+.+.++++.+...... ....+|++..|.++||+++++|+...++..+++++|++ |
T Consensus 29 ~~~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~i--t 103 (416)
T PRK09440 29 TPGAIMLGGGNP---AHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIAL--T 103 (416)
T ss_pred CCCceeccCCCC---CccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEE--c
Confidence 367899999996 223345567777666654321 12357999999999999999999766666678899998 9
Q ss_pred ccchhHHHHHHHHHHhhc-----CCCEEEE-eCCCCCChHHHHHHcCC----eeeEEEeecCC--CCCcCHHHHHHHHhc
Q 023599 118 LSGSGSLRIGADFLAKHY-----YQHTVYL-SQPTYGNHPNFFAAAGL----AMKTYHYYDPK--TNGLDFQGMLQDLGA 185 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~~-----~Gd~Vli-~~P~y~~~~~~~~~~G~----~~~~v~~~~~~--~~~~d~~~l~~~~~~ 185 (280)
+|+++++.++ +..++. +||.|++ ++|+|+.|...+...|. ....++. +.+ .+++|++.++ +.+
T Consensus 104 ~Ga~~al~~~--~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~--~~~ 178 (416)
T PRK09440 104 NGSQSAFFYL--FNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL-PEGQFKYHVDFEHLH--IDE 178 (416)
T ss_pred cChHHHHHHH--HHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccc-cccccccCCCHHHcc--cCC
Confidence 9999999999 666664 6899999 69999999886553331 2222333 222 3678999887 222
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhh-hcCCeEEEEeccccc
Q 023599 186 APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFV-ADGGECLVAQSYSKT 264 (280)
Q Consensus 186 ~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~ 264 (280)
+..+++++|||||||.+++.+++++|+++|++++++||+||+|.++.... .. .... ...+++|+++||||+
T Consensus 179 ---~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~--~~---~~~~~~~~~~vI~~~SfSK~ 250 (416)
T PRK09440 179 ---DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI--IF---SEATPLWNPNIILCMSLSKL 250 (416)
T ss_pred ---CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc--ch---hhcCccccCCeEEEeccccc
Confidence 23588899999999999999999999999999999999999998654321 11 1111 124699999999996
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
++||+|+||++++
T Consensus 251 -~~pGlRiG~~i~~ 263 (416)
T PRK09440 251 -GLPGVRCGIVIAD 263 (416)
T ss_pred -CCCcceEEEEeCC
Confidence 8999999999865
No 83
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-34 Score=253.26 Aligned_cols=205 Identities=17% Similarity=0.140 Sum_probs=170.0
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
++++|+.++ ++.++++...+...+.+. ..+.| |.....+|++++++++.. .++++|++ ++|+.+
T Consensus 23 ~~i~LssNe----nP~gp~~~~~~~~~~~~~----~~~rY-Pd~~~~~l~~a~a~~~~~-----~~~~~V~~--gnGsde 86 (356)
T COG0079 23 GIIKLSSNE----NPYGPPPKVIEAIRAALD----KLNRY-PDPDYRELRAALAEYYGV-----VDPENVLV--GNGSDE 86 (356)
T ss_pred cceeecCCC----CCCCCCHHHHHHHHHHHH----hhccC-CCCcHHHHHHHHHHHhCC-----CCcceEEE--cCChHH
Confidence 689999987 655555544444443332 13445 445899999999999743 34588888 999999
Q ss_pred HHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCC
Q 023599 123 SLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPT 202 (280)
Q Consensus 123 al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPT 202 (280)
.|..+ +.+++.+||+|+++.|+|..|...++..|++++.++. .+ +.+|++.+.+.+.++++ ++++|||||||
T Consensus 87 ~i~~l--~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~-~~--~~~d~~~~~~~~~~~~~---lv~i~nPNNPT 158 (356)
T COG0079 87 LIELL--VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPL-KE--FRLDLDAILAAIRDKTK---LVFLCNPNNPT 158 (356)
T ss_pred HHHHH--HHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecc-cc--cccCHHHHHHhhhcCCC---EEEEeCCCCCC
Confidence 99999 7888999999999999999999999999999999998 33 88999999999987655 99999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 203 GIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 203 G~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|..++.++++++++.+.+ +.+||+||+|.+|... +. ..+....+|+++++||||.||++|+|+||++..
T Consensus 159 G~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~---~~---~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~ 227 (356)
T COG0079 159 GTLLPREELRALLEALPE-GGLVVIDEAYIEFSPE---SS---LELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN 227 (356)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc---hh---hhhccCCCCEEEEEecHHhhhcchhceeeccCC
Confidence 999999999999999998 9999999999999872 11 223335568999999999999999999997653
No 84
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=6.7e-34 Score=277.31 Aligned_cols=222 Identities=9% Similarity=-0.009 Sum_probs=173.1
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcccc-CCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIK-ENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~-~~~i~~v~t~ 118 (280)
++.++|+|++|++ ..++++...++..+.+. .. .+ ..|.+++|+++++++...++.... +++|++ ++
T Consensus 695 ~g~~vI~LsinE~----d~ppPp~V~eAi~eal~--~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIv--t~ 761 (1082)
T PLN02672 695 QESSLIHMDVDES----FLPVPSAVKASIFESFV--RQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVY--GD 761 (1082)
T ss_pred CCCCEEEEeCCCC----CCCCCHHHHHHHHHHHh--hc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEE--eC
Confidence 4568999999994 33444444444444333 11 12 346788999999998777666554 357877 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
|+++++..+ +.+++.+||+|+++.|+|+.|...++..|++++.+|+..++++.+|++.+++++.+.++ .+++++||
T Consensus 762 Gs~elL~ll--l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~--~~I~L~nP 837 (1082)
T PLN02672 762 TSLALFNKL--VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKK--PWVYISGP 837 (1082)
T ss_pred CHHHHHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC--CEEEEECc
Confidence 999999988 77888999999999999999999999999999999993345688999999999865322 26778889
Q ss_pred C-CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC-hhHHHHhh---hc---CCeEEEEeccccccccccc
Q 023599 199 H-NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD-ALPVRMFV---AD---GGECLVAQSYSKTMGLYGE 270 (280)
Q Consensus 199 ~-NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~---~~---~~~~i~~~S~SK~~~~~G~ 270 (280)
| ||||.+++.+++++|+++|++|+++||+||+|.++.|+.... ..++.+.. +. ..++|+++||||.|++|||
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGL 917 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGH 917 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHH
Confidence 7 999999999999999999999999999999999999853211 11122111 11 2389999999999999999
Q ss_pred ccceEEEE
Q 023599 271 RVGALSVV 278 (280)
Q Consensus 271 RvG~~v~~ 278 (280)
|+||++++
T Consensus 918 RIGylIap 925 (1082)
T PLN02672 918 EFGFLALN 925 (1082)
T ss_pred HheeEEeC
Confidence 99999974
No 85
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.1e-34 Score=255.07 Aligned_cols=221 Identities=15% Similarity=0.037 Sum_probs=167.6
Q ss_pred hHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcc-
Q 023599 28 PIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPA- 106 (280)
Q Consensus 28 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~- 106 (280)
++.+..+..+. ...+.++|+.|+| + .+. .+.+.++.++.. . ...|.+..|.++||+++++++....+..
T Consensus 8 ~~~~~~~~~~~-~~~~~i~l~~~~p-~---~~~-~~~~~~~~~~~~--~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~ 77 (357)
T TIGR03539 8 SLAPYKAKAAS-HPDGIVDLSVGTP-V---DPV-PPLIRAALAAAA--D--APGYPQTWGTPELREAIVDWLERRRGVPG 77 (357)
T ss_pred HHHHHHHHhhh-CCCCeEEccCCCC-C---CCC-CHHHHHHHHHHH--h--hCCCCcccCCHHHHHHHHHHHHHhcCCCC
Confidence 44555555533 4567899999985 2 222 344444444443 1 3569999999999999999997765554
Q ss_pred ccCCCeEEeecccchhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhc
Q 023599 107 IKENRVSTVQCLSGSGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGA 185 (280)
Q Consensus 107 ~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~ 185 (280)
+.+++|++ |+|+++++.++ +..+ +.+||.|++++|+|..+...++..|++++.++. ++.+. .+
T Consensus 78 ~~~~~I~i--t~G~~~~i~~~--~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---------~~~l~---~~ 141 (357)
T TIGR03539 78 LDPTAVLP--VIGTKELVAWL--PTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADD---------PTELD---PV 141 (357)
T ss_pred CCcCeEEE--ccChHHHHHHH--HHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccCC---------hhhcC---cc
Confidence 77899998 99999999998 5555 689999999999999999988999998877642 22221 12
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH--hhhcCCeEEEEecccc
Q 023599 186 APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM--FVADGGECLVAQSYSK 263 (280)
Q Consensus 186 ~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~--~~~~~~~~i~~~S~SK 263 (280)
+ ..++++++||||||.+++.+++++|+++|++||++||+||+|.++.++.. ....+.. ......++|+++||||
T Consensus 142 ~---~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK 217 (357)
T TIGR03539 142 G---PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR-PVSILDPRVCGGDHTGLLAVHSLSK 217 (357)
T ss_pred C---ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC-CccceecccCCCccccEEEEecccc
Confidence 2 34788889999999999999999999999999999999999999888531 1111110 0012358999999999
Q ss_pred cccccccccceEEEE
Q 023599 264 TMGLYGERVGALSVV 278 (280)
Q Consensus 264 ~~~~~G~RvG~~v~~ 278 (280)
.|++||+|+||++++
T Consensus 218 ~~~~~G~R~G~~i~~ 232 (357)
T TIGR03539 218 RSNLAGYRAGFVAGD 232 (357)
T ss_pred ccCCCceeEEEEecC
Confidence 999999999999865
No 86
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=3.5e-33 Score=250.47 Aligned_cols=210 Identities=18% Similarity=0.136 Sum_probs=155.8
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
...++|+|+.|+ +..+++...+++..+.+. . ..+|++. +.++||+++|+++ .+++++|++ |+|
T Consensus 20 ~~~~~i~l~~~~----n~~~~~~~~~~a~~~~~~---~-~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~i--t~G 82 (360)
T PRK07392 20 PPDAILDFSASI----NPLGPPESVIAAIQSALS---A-LRHYPDP-DYRELRLALAQHH------QLPPEWILP--GNG 82 (360)
T ss_pred CcccEEEeCCcC----CCCCCCHHHHHHHHHHHH---H-hhcCCCc-CHHHHHHHHHHHh------CcChhhEEE--CCC
Confidence 334789999987 444455555554443333 1 4567665 5689999999997 245689998 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCC---CcCHHHHHHHHhcCCCCcEEEEec
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTN---GLDFQGMLQDLGAAPSGAIVLLQA 196 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~---~~d~~~l~~~~~~~~~~~~~v~~~ 196 (280)
+++++.++ +.. +.+||.|++++|+|..|...++..|++++.+++.++..+ ..+++.+++.. + +..+++++
T Consensus 83 ~~~~i~~~--~~~-l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~l~ 155 (360)
T PRK07392 83 AAELLTWA--GRE-LAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-T---PNDGLLLN 155 (360)
T ss_pred HHHHHHHH--HHH-hCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-c---CCCEEEEe
Confidence 99999998 555 357899999999999999999999999999998322222 24566665532 2 23488889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEE
Q 023599 197 SGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALS 276 (280)
Q Consensus 197 ~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v 276 (280)
|||||||.+++++++. ++++++++ +|+||+|.+|.++.. ..++....+..+++|+++||||+|++||+|+||++
T Consensus 156 nP~NPTG~~~~~~~l~---~l~~~~~~-~IiDE~y~~~~~~~~--~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v 229 (360)
T PRK07392 156 NPHNPTGKLWSREAIL---PLLEQFAL-VVVDEAFMDFLPPDA--EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAI 229 (360)
T ss_pred CCCCCCCCCcCHHHHH---HHHHHCCE-EEEECchhhhccCcc--ccchHHHhhcCCCEEEEEechhhhcCCchheeeee
Confidence 9999999999977665 45567775 666999999987531 22323333455799999999999999999999998
Q ss_pred EEc
Q 023599 277 VVR 279 (280)
Q Consensus 277 ~~~ 279 (280)
++.
T Consensus 230 ~~~ 232 (360)
T PRK07392 230 AHP 232 (360)
T ss_pred CCH
Confidence 753
No 87
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-33 Score=251.49 Aligned_cols=208 Identities=21% Similarity=0.106 Sum_probs=165.3
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
+.++|+|+.|+ +..++++..++...+.+. .....+|++ .|.++||+++++++... ..++|++ |+|+
T Consensus 25 ~~~~i~l~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~Y~~-~~~~~lr~~ia~~~~~~-----~~~~I~~--t~G~ 90 (356)
T PRK04870 25 ATGMVKLDAME----NPYRLPAELRAELGERLA--EVALNRYPD-PRAAALKAALRAAMGVP-----AGADVLL--GNGS 90 (356)
T ss_pred CCCceeCcCCC----CCCCCCHHHHHHHHHHhh--ccccccCCC-CCHHHHHHHHHHHhCcC-----CCCcEEE--cCCH
Confidence 35799999998 444455555555554444 222455765 68899999999997321 1247877 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
++++.++ +..++.+||+|++++|+|..|...++..|++++.+++ + +++++|++.+++++.+.. ..+++++||||
T Consensus 91 ~~~i~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~-~-~~~~~d~~~l~~~~~~~~--~~~v~l~~p~N 164 (356)
T PRK04870 91 DELIQLL--ALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPL-T-ADFTLDLPAMLAAIAEHR--PALVFLAYPNN 164 (356)
T ss_pred HHHHHHH--HHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecC-C-CCCCCCHHHHHHHhhcCC--CCEEEEcCCCC
Confidence 9999999 6677899999999999999999999999999999998 3 457899999999986531 23788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||.+++.+++++|+++| ++++|+||+|.+|.++ ... ..+ ...+++++++|||| +++||+|+||+++.
T Consensus 165 PtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~---~~~--~~~-~~~~~vi~~~S~SK-~~~~GlRiG~~i~~ 232 (356)
T PRK04870 165 PTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGD---SWL--PRL-ARFPNLLVMRTVSK-LGLAGLRLGYLAGH 232 (356)
T ss_pred CCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCc---chH--HHH-hhCCCEEEEecchh-hhhHHHhhhhhhCC
Confidence 999999999999999998 6789999999998653 111 122 34468999999999 89999999999864
No 88
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-33 Score=248.49 Aligned_cols=202 Identities=13% Similarity=0.101 Sum_probs=158.3
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
.+.|+|+.|++ ..+.++..++++.+.+. ......|+ ..|.+.||+++++++. +++++|++ |+|++
T Consensus 18 ~~~i~l~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~Y~-~~g~~~lr~~ia~~~~------~~~~~I~~--t~G~~ 82 (337)
T PRK03967 18 NYRIWLDKNEN----PFDLPEELKEEIFEELK--RVPFNRYP-HITSDPLREAIAEFYG------LDAENIAV--GNGSD 82 (337)
T ss_pred CceEEecCCCC----CCCCCHHHHHHHHHHhh--cCccccCC-CCCHHHHHHHHHHHhC------cCcceEEE--cCCHH
Confidence 46799999983 33455566666655554 22234564 5799999999999973 45689998 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++.++ +..+ +||+|+++.|+|..|...++..|++++.+++ + +++++|++.+++.+ ++++ +++++|||||
T Consensus 83 ~~l~~~--~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~~-~~~~---~v~~~~P~NP 152 (337)
T PRK03967 83 ELISYL--VKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPL-K-EDFTIDGERIAEKA-KNAS---AVFICSPNNP 152 (337)
T ss_pred HHHHHH--HHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeec-C-CCCCcCHHHHHHhc-cCCC---EEEEeCCCCC
Confidence 999887 4433 7999999999999999888999999999998 3 34789999998864 3333 6677999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||.+++.+++.+++ ++++++|+||+|.+|..+ .. ..+.+..+++|+++||||+|++||+|+||+++.
T Consensus 153 tG~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~---~~---~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~ 219 (337)
T PRK03967 153 TGNLQPEEEILKVL----ETGKPVVLDEAYAEFSGK---SL---IGLIDEYPNLILLRTFSKAFGLAGIRAGYAIAN 219 (337)
T ss_pred CCCCCCHHHHHHHH----hcCCEEEEECchhhhccc---ch---HHHHhhCCCEEEEecchHhhcchhhhheeeecC
Confidence 99999988776654 379999999999998632 12 222334568999999999999999999999875
No 89
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-33 Score=252.67 Aligned_cols=208 Identities=17% Similarity=0.102 Sum_probs=165.4
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
...++|+.|++ +.+.++..++...+.+. ...+|++. +.++||+++|+++. +++++|++ |+|++
T Consensus 32 ~~~~~l~~~~~----~~~~~~~~~~a~~~~~~----~~~~Y~~~-~~~~Lr~~ia~~~~------~~~~~I~i--t~G~~ 94 (369)
T PRK08153 32 PFRARIGANES----GFGPSPSVIAAMREAAA----EIWKYGDP-ENHDLRHALAAHHG------VAPENIMV--GEGID 94 (369)
T ss_pred cceeEecCCCC----CCCCCHHHHHHHHHHHH----HhhcCCCC-ccHHHHHHHHHHhC------CCHHHEEE--cCCHH
Confidence 45679999994 45556665555444432 13457665 58999999999971 35689988 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++..+ +..++.+||.|++++|+|+.+...+...|++++.+|+ +.+ ..|++.+++.+... +..+++++|||||
T Consensus 95 ~~l~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~-~~~--~~~~~~l~~~~~~~--~~~~i~l~~P~NP 167 (369)
T PRK08153 95 GLLGLI--VRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPY-RDD--REDLDALLDAARRE--NAPLVYLANPDNP 167 (369)
T ss_pred HHHHHH--HHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeC-CCC--CCCHHHHHHHhccc--CCcEEEEeCCCCC
Confidence 999999 6677899999999999999999888999999999998 333 57899988776532 2237878999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
||.+++.+++++|+++|+ ++++||+||+|.++.++. ... .+....+++|+++||||+||+||+|+||++++.
T Consensus 168 tG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~--~~~---~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~ 239 (369)
T PRK08153 168 MGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG--AAP---PIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP 239 (369)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc--cch---hhhhcCCCEEEEecchHhccCcchheeeeecCH
Confidence 999999999999999987 499999999999998753 122 222234689999999999999999999999753
No 90
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-33 Score=250.77 Aligned_cols=202 Identities=19% Similarity=0.167 Sum_probs=159.4
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
.++|+|+.|++ ..++ ++.+.++..+... .....|++ .|.++||+++|+++. +++++|++ |+|++
T Consensus 24 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~--~~~~~y~~-~~~~~lr~aia~~~~------~~~~~I~i--t~G~~ 87 (353)
T PRK05387 24 AKLIKLNTNEN----PYPP-SPKVLEAIRAALG--DDLRLYPD-PNADALRQAIAAYYG------LDPEQVFV--GNGSD 87 (353)
T ss_pred cceeeccCCCC----CCCC-CHHHHHHHHHHhh--hhhhcCCC-CcHHHHHHHHHHHhC------CCHHHEEE--cCCHH
Confidence 47899999994 3323 3444444444331 11345754 477999999999973 45689998 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++.++ +.+++.+||+|++++|+|+.|...++..|++++.+++ .+++.+|++.+++ ..+ +++++|||||
T Consensus 88 ~al~~~--~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~----~~~---~v~~~~P~NP 156 (353)
T PRK05387 88 EVLAHA--FLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPL--DDDFSIDVEDYLR----PNG---GIIFPNPNAP 156 (353)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeec--CCCCCCCHHHHHh----cCC---EEEEeCCCCC
Confidence 999999 7777899999999999999999999999999999998 3457899998864 222 6788999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||.+++.+++++|+++++ ++++|+||+|.+|..+ .. ..+.+..+++++++||||.||+||+|+||+++.
T Consensus 157 tG~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~---~~---~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~ 225 (353)
T PRK05387 157 TGIALPLAEIERILAANP--DSVVVIDEAYVDFGGE---SA---IPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH 225 (353)
T ss_pred CCCCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc---ch---HHHHhhCCCEEEEEehhHhhcchhhhceeeecC
Confidence 999999999999998754 8999999999886432 22 122334568999999999999999999999864
No 91
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-33 Score=246.88 Aligned_cols=202 Identities=16% Similarity=0.107 Sum_probs=155.0
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+.++|+|+.|+ +..++++..+++..+.+. ......|+ ..|.++||+++++|+.... +++++|++ |+|
T Consensus 17 ~~~~~i~l~~~~----~~~~~p~~~~~~~~~~~~--~~~~~~Y~-~~~~~~Lr~aia~~~~~~~---~~~~~i~i--t~G 84 (335)
T PRK14808 17 EKRDRTYLALNE----NPFPFPEDLVDEVFRRLN--SDTLRIYY-DSPDEELIEKILSYLDTDF---LSKNNVSV--GNG 84 (335)
T ss_pred CCCceeEecCCC----CCCCCCHHHHHHHHHHhh--hhhhhcCC-CCChHHHHHHHHHHhCCCC---CCcceEEE--cCC
Confidence 345899999999 445566666666555544 22223354 4589999999999986543 46799998 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
+++++.++ +..+ |.|++++|+|..|...++..|++++.+++ ++ ++.++... + +.+ .+++++|||
T Consensus 85 a~~~i~~~--~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~-~~-~~~~~~~~----~-~~~---~~i~i~nP~ 148 (335)
T PRK14808 85 ADEIIYVM--MLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPL-TK-DLRIPEVN----V-GEG---DVVFIPNPN 148 (335)
T ss_pred HHHHHHHH--HHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecC-CC-cCCCChhH----c-cCC---CEEEEeCCC
Confidence 99999999 5544 78999999999999999999999999998 33 34444221 2 222 388899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
||||.+++.+++++|+ +++++||+||+|.+|..+ .. .++.+..+++|+++||||+|+++|+|+||++++.
T Consensus 149 NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~---~~---~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~ 218 (335)
T PRK14808 149 NPTGHVFEREEIERIL----KTGAFVALDEAYYEFHGE---SY---VDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE 218 (335)
T ss_pred CCCCCCcCHHHHHHHH----hcCCEEEEECchhhhcCC---ch---HHHHHhCCCEEEEEechhhccCcccceEEEEeCH
Confidence 9999999999998886 479999999999998532 22 2223344699999999999999999999999763
No 92
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.6e-33 Score=251.92 Aligned_cols=210 Identities=20% Similarity=0.195 Sum_probs=165.8
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
.++|+|+.|++ ..++++ .+.+++.+.. .. ...| +..|.++||+++++++. +.+++|++ |+|++
T Consensus 22 ~~~i~l~~~~~----~~~~~~-~~~~a~~~~~--~~-~~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~--~~G~~ 84 (352)
T PRK03321 22 PGAIKLSSNET----PFGPLP-SVRAAIARAA--AG-VNRY-PDMGAVELRAALAEHLG------VPPEHVAV--GCGSV 84 (352)
T ss_pred ccceeccCCCC----CCCCCH-HHHHHHHHHH--Hh-cCcC-CCCcHHHHHHHHHHHhC------cCHHHEEE--CCCHH
Confidence 46899999984 222333 4444444333 11 3345 56799999999999973 34578988 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++..+ +..++.+||+|+++.|+|..|...++..|++++.+++ ++ ++++|++.+++.+.++++ ++++++||||
T Consensus 85 ~~l~~~--~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~-~~-~~~~~~~~l~~~~~~~~~---~v~l~~p~NP 157 (352)
T PRK03321 85 ALCQQL--VQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPL-TP-DHTHDLDAMAAAITDRTR---LIFVCNPNNP 157 (352)
T ss_pred HHHHHH--HHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccC-CC-CCCCCHHHHHHhhccCCC---EEEEeCCCCC
Confidence 999988 6667889999999999999998889999999999998 33 367899999998876544 7778899999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||.+++.+++.++++.+ +++++||+||+|.++.++.. ...++..+ +..+++++++||||.||+||+|+||++++
T Consensus 158 tG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~~ 231 (352)
T PRK03321 158 TGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDD-VPDGLELV-RDHPNVVVLRTFSKAYGLAGLRVGYAVGH 231 (352)
T ss_pred cCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcC-CCcHHHHH-hhCCCEEEEecchHHhhhHHHhhhhhcCC
Confidence 99999999999988876 47999999999999998532 22223333 34569999999999999999999999875
No 93
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.2e-32 Score=242.24 Aligned_cols=190 Identities=15% Similarity=0.130 Sum_probs=150.1
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
..++|+|+.++ +..+ + +.+.++..+.. .. ...|+. ...||+++++++. ++|++ |+|+
T Consensus 7 ~~~~i~l~~~~----np~~-p-~~~~~a~~~~~--~~-~~~yp~---~~~l~~~ia~~~~---------~~I~v--t~G~ 63 (311)
T PRK08354 7 EEGLIDFSASV----NPYP-P-EWLDEMFERAK--EI-SGRYTY---YEWLEEEFSKLFG---------EPIVI--TAGI 63 (311)
T ss_pred ccceeEecCCC----CCCC-C-HHHHHHHHHHH--HH-hhcCCC---hHHHHHHHHHHHC---------CCEEE--CCCH
Confidence 35789999987 3332 3 33344333322 11 234542 4779999999862 46777 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
++++.++ +. .+.+||+|++++|+|..|...++..|++++.++ +|++.+++.+. +++ +++++||||
T Consensus 64 ~~al~~~--~~-~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~---~vi~~~P~N 128 (311)
T PRK08354 64 TEALYLI--GI-LALRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNS---VVFFCNPNN 128 (311)
T ss_pred HHHHHHH--HH-hhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCC---EEEEecCCC
Confidence 9999988 43 345899999999999999999999999987653 47888888775 223 688899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
|||.+++.+++++|+++|++++++||+||+|.+|.++.. . . ..+++|+++||||+|++||+|+||+++
T Consensus 129 PTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~--~-----~--~~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 129 PDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE--S-----P--EGENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc--c-----c--CCCcEEEEeccHhhcCCccceeeeeee
Confidence 999999999999999999999999999999999998631 1 1 146999999999999999999999986
No 94
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-32 Score=245.32 Aligned_cols=207 Identities=16% Similarity=0.171 Sum_probs=161.8
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
+..++|+.|++ ..+.+...+++..+.+. .....+|.+. +.++||+++|+++. +.+++|++ |+|++
T Consensus 22 ~~~~~l~~~~~----~~~~p~~~~~a~~~~~~--~~~~~~y~~~-~~~~lr~~ia~~~~------~~~~~i~i--t~G~~ 86 (351)
T PRK14807 22 PYKYKMDANET----PFELPEEVIKNIQEIVK--SSQVNIYPDP-TAEKLREELARYCS------VVPTNIFV--GNGSD 86 (351)
T ss_pred CceeEccCCCC----CCCCCHHHHHHHHHHhh--cCcccCCCCc-cHHHHHHHHHHHhC------CCcccEEE--ecCHH
Confidence 45689999994 34455555555444443 2224557654 57899999999962 34689988 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhc-CCCCcEEEEecCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGA-APSGAIVLLQASGHN 200 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~~~~v~~~~p~N 200 (280)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+++ + +++++|++.+++++.+ +++ +++++||||
T Consensus 87 ~~l~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~~~~~~~k---~v~l~~p~N 159 (351)
T PRK14807 87 EIIHLI--MLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKL-K-EDYTYDVGSFIKVIEKYQPK---LVFLCNPNN 159 (351)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeec-C-CCCCCCHHHHHHHhhccCCC---EEEEeCCCC
Confidence 999999 6677899999999999999999999999999999998 3 4578999999999875 333 777889999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
|||.+++.++++++++ +++.++|+||+|.++. +. ... ...+..+++|+++||||+||+||+|+||++.+.
T Consensus 160 PtG~~~~~~~l~~l~~---~~~~~~ivDe~y~~~~-~~--~~~---~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~ 229 (351)
T PRK14807 160 PTGSVIEREDIIKIIE---KSRGIVVVDEAYFEFY-GN--TIV---DVINEFENLIVLRTLSKAFGLAGLRVGYAVANE 229 (351)
T ss_pred CCCCCCCHHHHHHHHH---hCCCEEEEeCcchhhc-cc--chH---HHhhhCCCEEEEecchHhcccchhceeeeecCH
Confidence 9999999988877664 5567899999998874 21 221 222344699999999999999999999998753
No 95
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.2e-33 Score=245.40 Aligned_cols=173 Identities=15% Similarity=0.167 Sum_probs=140.6
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeee
Q 023599 83 LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMK 162 (280)
Q Consensus 83 ~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~ 162 (280)
+|..-..+||+++++++.. .+++|++ |+|+++++.++ +. ++.+| .|++++|+|..|...++..|++++
T Consensus 37 Yp~~~~~~lr~~ia~~~~~------~~~~I~i--t~Gs~~~l~~~--~~-~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~ 104 (332)
T PRK06425 37 YPEISYTDIEDQIKIYTQG------LKIKVLI--GPGLTHFIYRL--LS-YINVG-NIIIVEPNFNEYKGYAFTHGIRIS 104 (332)
T ss_pred CcCcCHHHHHHHHHHHhCC------CcceEEE--CCCHHHHHHHH--HH-HhCCC-cEEEeCCChHHHHHHHHHcCCeEE
Confidence 3555688999999999633 3478888 99999999999 53 45676 577779999999999999999999
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.+|+ ++ ++.|.+.+++ .+++ +++++|||||||.+++.+++++|+++|++++++||+||+|.+|.++. .
T Consensus 105 ~vp~-~~--~~~~~~~l~~---~~~k---~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~---~ 172 (332)
T PRK06425 105 ALPF-NL--INNNPEILNN---YNFD---LIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR---A 172 (332)
T ss_pred EEeC-Cc--ccCcHHHHhh---cCCC---EEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc---c
Confidence 9998 33 3456554442 2333 77788999999999999999999999999999999999999998752 1
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.+...+.+..+++|+++||||+||+||+|+||++++.
T Consensus 173 ~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~ 209 (332)
T PRK06425 173 EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD 209 (332)
T ss_pred hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH
Confidence 2334444445699999999999999999999999763
No 96
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-32 Score=247.09 Aligned_cols=214 Identities=18% Similarity=0.231 Sum_probs=171.1
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
+..+.|+|+.|+ +..+. .+.+.+++.+... .....+|.+..|.++||+++++++. .+++++++ |+|
T Consensus 26 ~~~~~i~l~~~~----~~~~~-~~~~~~a~~~~~~-~~~~~~y~~~~g~~~lr~~ia~~l~------~~~~~v~~--~~g 91 (380)
T PRK06225 26 KDKEMIWMGQNT----NHLGP-HEEVREAMIRCIE-EGEYCKYPPPEGFPELRELILKDLG------LDDDEALI--TAG 91 (380)
T ss_pred hcCCeEEccCCC----CCCCC-CHHHHHHHHHHHh-cCCCCCCCCCcchHHHHHHHHHhcC------CCCCcEEE--eCC
Confidence 345799999887 33333 4444444444432 2234568888999999999999962 24578888 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCC-CCCcCHHHHHHHHhcCCCCcEEEEecCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPK-TNGLDFQGMLQDLGAAPSGAIVLLQASG 198 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~~~~~~~~~~~v~~~~p 198 (280)
+++++.++ +..++.+||+|++++|+|..+...++..|++++++++.+++ ++.+|++.+++.+.++++ ++++++|
T Consensus 92 ~t~al~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~---~v~l~~p 166 (380)
T PRK06225 92 ATESLYLV--MRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTR---LIYLIDP 166 (380)
T ss_pred HHHHHHHH--HHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCce---EEEEeCC
Confidence 99999999 77778899999999999999998999999999999973222 468999999998876543 7777899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||||.+++.+++++|+++|+++|+++|+||+|.+|..+. .+...+ ..+++++++||||.||++|+|+||+++.
T Consensus 167 ~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~ 240 (380)
T PRK06225 167 LNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH----TLAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVAT 240 (380)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC----Cchhhc--CCCCEEEEeechhhcCCccceeEEEecC
Confidence 9999999999999999999999999999999999886531 111222 2368999999999999999999999875
No 97
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3.7e-32 Score=240.99 Aligned_cols=189 Identities=15% Similarity=0.127 Sum_probs=145.8
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
.++|+|+.++ ++.+++.+.+.. ..+ ..|.. +...||+++++++. .++|++ |+|++
T Consensus 20 ~~~i~l~~ne----~p~~~~~~~~~~--~~~-------~~yp~--~~~~Lr~~ia~~~~--------~~~I~i--t~Gs~ 74 (330)
T PRK05664 20 ADWLDLSTGI----APWPWPVPAIPA--DAW-------ARLPE--TDDGLEAAARAYYG--------APQLLP--VAGSQ 74 (330)
T ss_pred HHheeecCCc----CCCCCCCcccCH--HHH-------HhCCC--ChHHHHHHHHHHhC--------CCCEEE--CcCHH
Confidence 3679999997 222222222211 111 12533 34899999999962 378888 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++.++ +. +.+||+|++++|+|+.|...++..|++++.+++ + .+++.+. +++ +++++|||||
T Consensus 75 ~al~~~--~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~-~---------~~~~~~~-~~~---~v~l~nP~NP 136 (330)
T PRK05664 75 AAIQAL--PR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE-A---------EVEAALD-SLD---VLVVVNPNNP 136 (330)
T ss_pred HHHHHH--HH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech-h---------hHhhhhc-CCC---EEEEeCCcCC
Confidence 999988 43 579999999999999999999999999999886 1 2344442 333 6788899999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
||.+++.+++++|+++|++++++||+||+|.++... .++.++. ..+++|+++||||+||+||+|+||++++.
T Consensus 137 TG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~-----~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v~~~ 208 (330)
T PRK05664 137 TGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ-----HSLAACA-HRPGLIVLRSFGKFFGLAGARLGFVLAEP 208 (330)
T ss_pred CCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc-----ccccccc-cCCCEEEEeeccccccCCCcceEEEEeCH
Confidence 999999999999999999999999999999877531 2233443 34689999999999999999999999853
No 98
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-32 Score=246.13 Aligned_cols=199 Identities=19% Similarity=0.182 Sum_probs=158.8
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
..++|+.++ ++.+++.. + . ......| |......|++++++++ + +++++|++ |+|+++
T Consensus 29 ~~~~l~~Ne----np~~~~~~-~-------~--~~~~~~Y-p~~~~~~l~~~~a~~~-g-----~~~~~I~~--~~Gs~e 85 (351)
T PRK01688 29 GDVWLNANE----YPTAVEFQ-L-------T--QQTLNRY-PECQPKAVIENYAAYA-G-----VKPEQVLV--SRGADE 85 (351)
T ss_pred CceEecCCC----CCCCCChh-h-------c--ccccccC-CCCChHHHHHHHHHHh-C-----CCHHHEEE--cCCHHH
Confidence 468999887 43333322 1 1 1112334 5545689999999985 2 35689998 999999
Q ss_pred HHHHHHHHHHhhcCC-CEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 123 SLRIGADFLAKHYYQ-HTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 123 al~~~~~~~~~~~~G-d~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
++.++ +.+++.+| |+|+++.|+|..|...++..|++++.+++ + +++.+|++.+++++ ++++ +++++|||||
T Consensus 86 ~i~~~--~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~-~-~~~~~d~~~l~~~~-~~~~---lv~l~nPnNP 157 (351)
T PRK01688 86 GIELL--IRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPT-L-DNWQLDLPAIADNL-DGVK---VVYVCSPNNP 157 (351)
T ss_pred HHHHH--HHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeec-C-CCCCCCHHHHHHhc-cCCc---EEEEeCCCCC
Confidence 99999 77778887 99999999999999999999999999998 3 35889999999987 3444 8888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||.+++.+++++|++.|++ +.+||+||+|.+|..+. +...+.....++|+++||||.||+||+|+||+++.
T Consensus 158 TG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~-----s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~ 228 (351)
T PRK01688 158 TGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQA-----SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN 228 (351)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCC-----ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC
Confidence 9999999999999999986 68899999999997431 12333344579999999999999999999999864
No 99
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=9.8e-32 Score=241.62 Aligned_cols=221 Identities=20% Similarity=0.127 Sum_probs=169.4
Q ss_pred ChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcc
Q 023599 27 IPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPA 106 (280)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~ 106 (280)
..+....+++ ...++++|+.|++ ...+++. +.++..+.. .. ...|++.. ..+||+++++++.
T Consensus 20 ~~~~~~~~~~---~~~~~i~l~~~~~----~~~~~~~-~~~a~~~~~--~~-~~~y~~~~-~~~lr~~ia~~~~------ 81 (367)
T PRK02731 20 KPIEELVREY---GIADIIKLASNEN----PLGPSPK-AIEAIRAAA--DE-LHRYPDGS-GFELKAALAEKFG------ 81 (367)
T ss_pred CCHHHHHHhc---CCCceEEecCCCC----CCCCCHH-HHHHHHHHH--Hh-hcCCCCCc-HHHHHHHHHHHhC------
Confidence 4454444444 3457899999973 2223333 434333322 11 34576554 4789999999972
Q ss_pred ccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC
Q 023599 107 IKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 107 ~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 186 (280)
+.+++|++ |+|+++++.++ +..++++||+|++++|+|..|...++..|++++.+++ +++++|++.+++.+.++
T Consensus 82 ~~~~~i~~--t~G~~~~l~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~ 154 (367)
T PRK02731 82 VDPERIIL--GNGSDEILELL--ARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPR 154 (367)
T ss_pred cCHHHEEE--cCCHHHHHHHH--HHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCC
Confidence 24588888 99999999988 6667889999999999999998888899999999987 24678999999998754
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
++ +++++|||||||.+++.++++++++.|+ +++++|+||+|.++.++.. ...++ ...+..+++|+++||||.||
T Consensus 155 ~~---~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~-~~~~~-~~~~~~~~~i~~~S~SK~~g 228 (367)
T PRK02731 155 TR---LVFIANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD-YEDGL-ELVAKFPNVVVTRTFSKAYG 228 (367)
T ss_pred Cc---EEEEeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC-cccHH-HHHhhcCCEEEEeeehHhhc
Confidence 44 7788999999999999999999999885 6999999999999987432 22223 23345578999999999999
Q ss_pred ccccccceEEEE
Q 023599 267 LYGERVGALSVV 278 (280)
Q Consensus 267 ~~G~RvG~~v~~ 278 (280)
++|+|+||+++.
T Consensus 229 ~~G~RiG~l~~~ 240 (367)
T PRK02731 229 LAGLRVGYGIAP 240 (367)
T ss_pred CcccceeeeeCC
Confidence 999999999875
No 100
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=6.5e-32 Score=242.46 Aligned_cols=180 Identities=18% Similarity=0.145 Sum_probs=147.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCC-CEEEEeCCCCCChHHHHHHcC
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQ-HTVYLSQPTYGNHPNFFAAAG 158 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~G-d~Vli~~P~y~~~~~~~~~~G 158 (280)
..|++. +.++||+++++++. +++++|++ |+|+++++.++ +.+++.+| |+|++++|+|..|...++..|
T Consensus 54 ~~Y~~~-~~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~l~~~--~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g 122 (364)
T PRK04781 54 RRYPDP-QPPGLRSALAALYG------CAPEQLLI--GRGSDEAIDLL--VRALCVPGRDAVLVTPPVFGMYAVCARLQN 122 (364)
T ss_pred ccCCCC-CHHHHHHHHHHHhC------cChHHEEE--eCCHHHHHHHH--HHHhcCCCCCeEEEcCCChHHHHHHHHHcC
Confidence 456554 57899999999972 34689988 99999999999 77778888 799999999999998889999
Q ss_pred CeeeEEEeecC-CCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 159 LAMKTYHYYDP-KTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 159 ~~~~~v~~~~~-~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
++++.+++.++ +++.+|++.+++.+... +..+++++|||||||.+++.+++++++++|+ ++++||+||+|.+|.++
T Consensus 123 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~~--~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~ 199 (364)
T PRK04781 123 APLVEVPLVDGADGFHADVPAIVAAALAS--NAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDV 199 (364)
T ss_pred CEEEEEecCCCccCCCcCHHHHHHHHhcc--CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCC
Confidence 99999998322 34667899887655322 2237888999999999999999999999986 47899999999999864
Q ss_pred cCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 238 MDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
. . ...+.+..+|+|+++||||+||+||+|+||++++
T Consensus 200 ~--~---~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~ 235 (364)
T PRK04781 200 P--S---AVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN 235 (364)
T ss_pred c--c---hHHHHhhCCCEEEEecChhhcccccceeeeeeCC
Confidence 2 1 1233345679999999999999999999999875
No 101
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=5e-32 Score=242.45 Aligned_cols=198 Identities=17% Similarity=0.147 Sum_probs=156.6
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
...++|+.++ ++.+++. .+ ... ....|++. +.++||+++|+++ + +++++|++ |+|++
T Consensus 31 ~~~~~l~~ne----~~~~~~~-~~-----~~~----~~~~Yp~~-~~~~Lr~aia~~~-~-----~~~~~I~i--t~Gs~ 87 (354)
T PRK04635 31 RGDIWINANE----SPFNNEY-KL-----DLA----RLNRYPEC-QPPELINAYSAYA-G-----VAPEQILT--SRGAD 87 (354)
T ss_pred CCcEEeeCCC----CCCCCCh-hh-----hhH----HhccCCCC-CHHHHHHHHHHHh-C-----cCHHHEEE--eCCHH
Confidence 3568999988 3333332 11 111 13446554 6899999999985 1 45689998 99999
Q ss_pred hHHHHHHHHHHhhcCC-CEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 122 GSLRIGADFLAKHYYQ-HTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 122 ~al~~~~~~~~~~~~G-d~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
+++.++ +..++.+| |+|++++|+|..|...++..|++++.+|+ + +++.+|.+.++. + ++++ +++++||||
T Consensus 88 ~~i~~~--~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~-~-~~~~~~~~~l~~-~-~~~~---li~i~nP~N 158 (354)
T PRK04635 88 EAIELL--IRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPL-T-ADYQLPLDYIEQ-L-DGAK---LVFICNPNN 158 (354)
T ss_pred HHHHHH--HHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEec-C-CCCCCCHHHHHh-c-cCCC---EEEEeCCCC
Confidence 999999 77778888 99999999999999999999999999998 3 347789988873 3 3333 888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|||.+++.+++++|+++|+ +++||+||+|.+|..+. +...+....+++|+++||||.||+||+|+||+++.
T Consensus 159 PTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~~-----s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~ 229 (354)
T PRK04635 159 PTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPEY-----SVADLLASYPNLVVLRTLSKAFALAGARCGFTLAN 229 (354)
T ss_pred CCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccCc-----chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCC
Confidence 9999999999999999886 49999999999987431 22333344578999999999999999999999864
No 102
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.98 E-value=2.1e-31 Score=237.59 Aligned_cols=207 Identities=17% Similarity=0.128 Sum_probs=165.9
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
.++|+|++|++ +.+.+++.++++.+.+. ...+|++..| ++||+++++++. +.+++|++ |+|++
T Consensus 19 ~~~i~l~~~~~----~~~~~~~~~~a~~~~~~----~~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~--~~G~~ 81 (346)
T TIGR01141 19 KEVIKLNSNEN----PFGPPPKAKEALRAEAD----KLHRYPDPDP-AELKQALADYYG------VDPEQILL--GNGSD 81 (346)
T ss_pred CceEEccCCCC----CCCCCHHHHHHHHHhHH----HhhcCCCCCH-HHHHHHHHHHhC------cChHHEEE--cCCHH
Confidence 57999999994 44455555555544432 1356776666 899999999974 23578888 99999
Q ss_pred hHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCC
Q 023599 122 GSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNP 201 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NP 201 (280)
+++..+ +.+++.+||+|++++|+|+.+...++..|++++.+++ ++ ++.+|++.+++.+.++++ ++++++|+||
T Consensus 82 ~~l~~~--~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~-~~-~~~~d~~~l~~~~~~~~~---~v~l~~p~Np 154 (346)
T TIGR01141 82 EIIELL--IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPL-DE-DGQLDLEDILVAIDDKPK---LVFLCSPNNP 154 (346)
T ss_pred HHHHHH--HHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecc-CC-CCCCCHHHHHHhcCCCCC---EEEEeCCCCC
Confidence 999888 6677889999999999999998888999999999998 33 367899999998755443 7888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||.+++.++++++++.++ +++++|+||+|.++..+. .. ........++++++|+||.||++|+|+||+++.
T Consensus 155 tG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~--~~---~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 225 (346)
T TIGR01141 155 TGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP--ST---LPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN 225 (346)
T ss_pred CCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc--cH---HHHHhhCCCEEEEehhhHhhhchhhhceeeecC
Confidence 999999999999999987 799999999999877642 11 122223458999999999999999999999875
No 103
>PRK07908 hypothetical protein; Provisional
Probab=99.97 E-value=7.2e-31 Score=234.51 Aligned_cols=200 Identities=18% Similarity=0.099 Sum_probs=152.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+.+.++|+.++ +..+++....+...+.+. . ..+|.+..|.++||+++++++. +++++|++ |+|
T Consensus 20 ~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~---~-~~~Y~~~~g~~~lr~aia~~~~------~~~~~I~i--t~G 83 (349)
T PRK07908 20 AGPGLLDFAVNV----RHDTPPEWLRERLAARLG---D-LAAYPSTEDERRARAAVAARHG------RTPDEVLL--LAG 83 (349)
T ss_pred CCCCeEEecCCC----CCCCCCHHHHHHHHHHhh---H-hhcCCCccchHHHHHHHHHHhC------cChhhEEE--CCC
Confidence 457899999998 333344444444444332 1 3568888899999999999962 35689998 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
+++++.++ +. +.+| .++++.|+|..+...++..|++++.+++ ++ ++++|++.+ .++++ +++++|||
T Consensus 84 a~~al~~~--~~--l~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~-~~-~~~~d~~~l----~~~~~---~i~l~np~ 149 (349)
T PRK07908 84 AAEGFALL--AR--LRPR-RAAVVHPSFTEPEAALRAAGIPVHRVVL-DP-PFRLDPAAV----PDDAD---LVVIGNPT 149 (349)
T ss_pred HHHHHHHH--Hh--cCCC-eEEEeCCCChHHHHHHHHcCCEEEeecc-Cc-ccCcChhHh----ccCCC---EEEEcCCC
Confidence 99999988 44 4664 6778899999999999999999999998 33 377888754 33333 88889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||||.+++.+++.+ +|+ ++.++|+||+|.++..+. ..++.+. ..+++++++||||+|++||+|+||++++
T Consensus 150 NPTG~~~~~~~l~~---l~~-~~~~iIvDe~y~~~~~~~---~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~~ 219 (349)
T PRK07908 150 NPTSVLHPAEQLLA---LRR-PGRILVVDEAFADAVPGE---PESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALGA 219 (349)
T ss_pred CCCCCCcCHHHHHH---HHh-cCCEEEEECcchhhccCC---ccccccc--cCCCEEEEeecccccCCccceeeeeecC
Confidence 99999999886654 455 578888999999986531 2233322 2358999999999999999999999975
No 104
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.97 E-value=5e-31 Score=234.45 Aligned_cols=210 Identities=16% Similarity=0.118 Sum_probs=153.1
Q ss_pred ccccCCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 023599 21 VARAADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIF 100 (280)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~ 100 (280)
.+..+++.+......+.. ...++++|+.++ ++.+++.+.+.. ..+ ..|+. .. .+||+++++++.
T Consensus 4 ~~~~hg~~~~~~~~~~~~-~~~~~i~ls~Ne----np~~~~~~~~~~--~~~-------~~Yp~-~~-~~L~~~ia~~~~ 67 (339)
T PRK06959 4 APIAHGGNLHEAARRYGI-PYDAWLDLSTGI----NPHGYPVPPVPA--DAW-------RRLPE-DD-DGLAACAARYYG 67 (339)
T ss_pred CCcCCCchHHHHHHHcCC-ChhhhceeccCC----CCCCCCCCCCCH--HHH-------HhCCC-ch-HHHHHHHHHHhC
Confidence 344455666555555532 224689999988 333333122211 112 23544 34 899999999963
Q ss_pred CCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHH
Q 023599 101 GADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGML 180 (280)
Q Consensus 101 ~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 180 (280)
-. .+++|++ |+|+++++.++ . .++.+|| |++++|+|..|...++..|++++.+++ +. +.
T Consensus 68 ~~-----~~~~I~i--~~Gs~e~i~~l--~-~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~-~~-------~~-- 126 (339)
T PRK06959 68 AP-----DAAHVLP--VAGSQAAIRAL--P-ALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDE-AA-------DT-- 126 (339)
T ss_pred CC-----CcccEEE--CcCHHHHHHHH--H-HhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecc-cc-------hh--
Confidence 21 2488988 99999999866 3 3467876 889999999999999999999998887 22 11
Q ss_pred HHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEec
Q 023599 181 QDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQS 260 (280)
Q Consensus 181 ~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 260 (280)
+.+..+ +++++|||||||.+++.+++++|++.|++++.++|+||+|.+|.+. .++..+. ..+++|+++|
T Consensus 127 --~~~~~~---~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-----~s~~~~~-~~~~vi~l~S 195 (339)
T PRK06959 127 --LPAALT---HLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA-----ASLAAHT-DRPGLVVLRS 195 (339)
T ss_pred --ccccCC---EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc-----ccchhcc-CCCCEEEEec
Confidence 222223 7888999999999999999999999999999999999999998753 1223332 2468999999
Q ss_pred ccccccccccccceEEEE
Q 023599 261 YSKTMGLYGERVGALSVV 278 (280)
Q Consensus 261 ~SK~~~~~G~RvG~~v~~ 278 (280)
|||.||+||+|+||++++
T Consensus 196 fSK~~gl~GlRiGy~v~~ 213 (339)
T PRK06959 196 VGKFFGLAGVRAGFVLAA 213 (339)
T ss_pred ChhhcCCcchheEEEecC
Confidence 999999999999999975
No 105
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.97 E-value=1e-30 Score=231.77 Aligned_cols=210 Identities=18% Similarity=0.117 Sum_probs=164.5
Q ss_pred CCChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q 023599 25 ADIPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADS 104 (280)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~ 104 (280)
+++++.+++.++. .+.++.++|+.|++ +.+++ ..+.. .....+|++..+ ++||+++++++.
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~--~~~~~-------~~~~~~y~~~~~-~~lr~~la~~~~---- 61 (330)
T TIGR01140 1 HGGNLRRAAARYG-IPPEDWLDFSTGIN----PLGPP--VPPIP-------ASAWARYPDPEY-DELRAAAAAYYG---- 61 (330)
T ss_pred CCccHHHHHHHcC-CChhheeEccccCC----CCCCC--hhhcc-------hHHHhhCCCccH-HHHHHHHHHHhC----
Confidence 3567888888874 45678999999983 22333 22211 112355766665 999999999962
Q ss_pred ccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHh
Q 023599 105 PAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLG 184 (280)
Q Consensus 105 ~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~ 184 (280)
+.+++|++ |+|+++++.++ ... +.+| .|++++|+|..|...++..|+++++++ |++.+++.+.
T Consensus 62 --~~~~~i~~--t~G~~~~i~~~--~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~ 124 (330)
T TIGR01140 62 --LPAASVLP--VNGAQEAIYLL--PRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE 124 (330)
T ss_pred --CChhhEEE--CCCHHHHHHHH--HHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc
Confidence 23588888 99999999988 333 4677 799999999999999999999888776 6888888873
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 185 AAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
+++ ++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++. ++..+.+..+++|+++||||+
T Consensus 125 -~~~---~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-----~~~~~~~~~~~~i~~~S~SK~ 195 (330)
T TIGR01140 125 -ELD---VLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA-----SLAPQAARFPGLVVLRSLTKF 195 (330)
T ss_pred -cCC---EEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc-----chhhHhccCCCEEEEEecchh
Confidence 333 77779999999999999999999999999999999999999987641 223333345689999999999
Q ss_pred ccccccccceEEEEc
Q 023599 265 MGLYGERVGALSVVR 279 (280)
Q Consensus 265 ~~~~G~RvG~~v~~~ 279 (280)
||++|+|+||+++..
T Consensus 196 ~g~~G~R~G~i~~~~ 210 (330)
T TIGR01140 196 FGLAGLRLGFVVAHP 210 (330)
T ss_pred hcCchhhhhheeCCH
Confidence 999999999998753
No 106
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=4.1e-30 Score=230.54 Aligned_cols=219 Identities=18% Similarity=0.151 Sum_probs=162.2
Q ss_pred ChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcc
Q 023599 27 IPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPA 106 (280)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~ 106 (280)
..+....+++.. ...++|+|+.|+ +..++++..++++.+.+. . ...|++.. .++||+++++++.
T Consensus 20 ~~~~~~~~~~~~-~~~~~i~l~~~~----~~~~~~~~~~~~~~~~~~---~-~~~y~~~~-~~~lr~~ia~~~~------ 83 (361)
T PRK00950 20 KSKEEIAREYGI-DPESIIKLGSNE----NPLGPSPKAVEAIEKELS---K-IHRYPEPD-APELREALSKYTG------ 83 (361)
T ss_pred CCHHHHHHHhCC-CccceEEccCCC----CCCCCCHHHHHHHHHHHH---h-hcCCCCCC-HHHHHHHHHHHhC------
Confidence 334444445432 334899999998 333344444444443333 1 34566554 4899999999962
Q ss_pred ccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC
Q 023599 107 IKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 107 ~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 186 (280)
++++++++ .++|+++++.++ +..++.+||+|++++|+|..+...++..|++++.++. ++++.+|++.+++.+.++
T Consensus 84 ~~~~~i~~-~~~Ga~~~i~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~ 158 (361)
T PRK00950 84 VPVENIIV-GGDGMDEVIDTL--MRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEK 158 (361)
T ss_pred CCHHHEEE-eCCCHHHHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccC
Confidence 23577764 246778888888 6666789999999999999999889999999999986 445789999999988654
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
++ ++++++||||||.+++.++++++ |+++++++|+||+|.++... .. ..+.+..+++++++||||.||
T Consensus 159 ~~---~v~~~~p~nptG~~~~~~~l~~l---~~~~~~~li~De~y~~~~~~---~~---~~~~~~~~~vi~~~S~SK~~g 226 (361)
T PRK00950 159 TK---VIFLCTPNNPTGNLIPEEDIRKI---LESTDALVFVDEAYVEFAEY---DY---TPLALEYDNLIIGRTFSKVFG 226 (361)
T ss_pred CC---EEEEeCCCCCCCCCcCHHHHHHH---HHHCCcEEEEECchhhhCcc---ch---HHHHHhcCCEEEEEeehHhhc
Confidence 44 77778999999999999877655 56789999999999988621 22 223334468999999999999
Q ss_pred ccccccceEEEE
Q 023599 267 LYGERVGALSVV 278 (280)
Q Consensus 267 ~~G~RvG~~v~~ 278 (280)
+||+|+||++++
T Consensus 227 ~~GlRiG~~~~~ 238 (361)
T PRK00950 227 LAGLRIGYGFVP 238 (361)
T ss_pred CchhhcchhcCC
Confidence 999999999875
No 107
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-29 Score=218.68 Aligned_cols=193 Identities=18% Similarity=0.198 Sum_probs=163.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCC--CccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-
Q 023599 79 DKEYLPITGLPEFNKLSAKLIFGAD--SPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA- 155 (280)
Q Consensus 79 ~~~y~~~~G~~~lr~~ia~~l~~~~--~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~- 155 (280)
...|.+-.|.+.+|+++|+++.... ....+|+++++ ++|++++.+.+ ..-+.+|||..+||.|.|+++..-++
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv--~~G~T~ane~l--~fcLadpgdafLvPtPyY~gfdrdl~~ 189 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVV--TNGATSANETL--MFCLADPGDAFLVPTPYYPGFDRDLRW 189 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEE--ecccchhhHHH--HHHhcCCCceeeecCCCCCccccccee
Confidence 3458889999999999999975443 34567899888 99999999999 67778899999999999999976666
Q ss_pred HcCCeeeEEEeecCCCCCcCHHHHHHHHhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCC
Q 023599 156 AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA---PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQ 232 (280)
Q Consensus 156 ~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~ 232 (280)
..|.++++|.+..++++.++.+++|+++++. ..+..-++++||+||.|++++++++..++++|.++|+.+|+||+|.
T Consensus 190 rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya 269 (471)
T KOG0256|consen 190 RTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA 269 (471)
T ss_pred ccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc
Confidence 6799999999966677999999999998753 2344577889999999999999999999999999999999999999
Q ss_pred CcccCcCCChhHHHHhhhc----CCeEEEEecccccccccccccceEE
Q 023599 233 GFVMNMDADALPVRMFVAD----GGECLVAQSYSKTMGLYGERVGALS 276 (280)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~----~~~~i~~~S~SK~~~~~G~RvG~~v 276 (280)
.-+|+.. ...++.++... .++++++.|+||.+|+||+|+|.+.
T Consensus 270 ~sVF~~~-~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviY 316 (471)
T KOG0256|consen 270 GSVFDKS-EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIY 316 (471)
T ss_pred ccccCcc-CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEE
Confidence 9999743 44455444332 3599999999999999999999764
No 108
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.96 E-value=7.8e-29 Score=215.27 Aligned_cols=242 Identities=20% Similarity=0.217 Sum_probs=180.8
Q ss_pred ChHHHHHHHhhcCCCCCeeEeecceeecCCCCccchHHHH-----------------HHHHHHhccC----CCCCCCCCC
Q 023599 27 IPIYAVMAAFREDPSPMKLNLGFGVYRTEEGKPLLLNAVR-----------------QAEQLLVNDL----SADKEYLPI 85 (280)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~----~~~~~y~~~ 85 (280)
.++..+.+.. .+..-.+|+|+.|.| +++.+|.-...++ -+.....+.. ...++|++.
T Consensus 22 ~p~~~~~~~~-s~~~i~~i~lagGlP-np~~fp~~~~s~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~l~~s~alQYg~s 99 (472)
T KOG0634|consen 22 SPLRALGDIK-SASPISIISLAGGLP-NPDYFPIRSDSIKPQGSWKKENGKKLNNVTFAFENEASENTLPLSRALQYGQS 99 (472)
T ss_pred ChHHHhhhHh-hcCCCceEEecCCCC-CCCcccccccccccccCccccccccccceeeeccccCCcccchhhhhhccccc
Confidence 3444333333 333334899999987 5555554433333 0001111100 135789999
Q ss_pred CCCHHHHHHHHHHHh-CCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEE
Q 023599 86 TGLPEFNKLSAKLIF-GADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTY 164 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~-~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v 164 (280)
.|.++|...+.++.. ..+...+..-++++ |+|.+.+++.+ +..++..||.|++..++|......++..|++++.|
T Consensus 100 ~G~peLl~fik~h~~~~ih~p~~~~wdiii--t~G~t~~l~~~--l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv 175 (472)
T KOG0634|consen 100 SGIPELLLFIKDHNRPTIHAPPYKNWDIII--TNGNTDGLFKV--LRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPV 175 (472)
T ss_pred cCcHHHHHHHHHhccccccCCCCCCceEEE--ecCCchHHHHH--HHHhhcCCCceEEecccchHHHHhccccCceEEec
Confidence 999999999999743 23444445557777 99999999999 88889999999999999999999999999999999
Q ss_pred EeecCCCCCcCHHHHHHHHhcC-------CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 165 HYYDPKTNGLDFQGMLQDLGAA-------PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 165 ~~~~~~~~~~d~~~l~~~~~~~-------~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
++ |++ ++++|.|++.+... ++..++.++++.+||||..++.+++++|.++|++|+++||+||.|.-+.++
T Consensus 176 ~m-d~~--Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~ 252 (472)
T KOG0634|consen 176 KM-DQD--GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMN 252 (472)
T ss_pred cc-cCC--CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecc
Confidence 98 444 79999999988653 235689999999999999999999999999999999999999999998885
Q ss_pred c-------CCChhHHHHhh----------hcCCeEEEEecccccccccccccceEEEE
Q 023599 238 M-------DADALPVRMFV----------ADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 238 ~-------~~~~~~~~~~~----------~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
. ..++.+...+. +-..|||.+.||||.++ ||+|+||++..
T Consensus 253 ~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~ 309 (472)
T KOG0634|consen 253 TYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGN 309 (472)
T ss_pred ccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecC
Confidence 2 11111111111 12349999999999997 99999999865
No 109
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.1e-27 Score=203.61 Aligned_cols=216 Identities=19% Similarity=0.161 Sum_probs=181.6
Q ss_pred cchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhc-CCC
Q 023599 60 LLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHY-YQH 138 (280)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~-~Gd 138 (280)
+|.++++++.+-+....+....|+.++|++-.|+.+|+|+.++++.+.++++|.+ |.|++.|+..+ +.-++. +.+
T Consensus 87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~L--T~GAS~ai~~i--l~l~~~~~~~ 162 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFL--TTGASPAIRSI--LSLLIAGKKT 162 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeee--cCCCcHHHHHH--HHHHhcCCCC
Confidence 6778888888877765665667999999999999999999999998889999999 99999999988 443343 779
Q ss_pred EEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC--CCCcEEEEecCCCCCCCCCCCHHHHHHHHH
Q 023599 139 TVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA--PSGAIVLLQASGHNPTGIDPTAQQWEQIRQ 216 (280)
Q Consensus 139 ~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~--~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~ 216 (280)
.|++|-|.|+-|...+..+|...+.+-+.++.+|++|.++|++.+.+. ..++.++++.||.||||++++++.+++|+.
T Consensus 163 GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~ 242 (475)
T KOG0258|consen 163 GVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIIC 242 (475)
T ss_pred ceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHH
Confidence 999999999999999999999998888844456999999999999764 345678888999999999999999999999
Q ss_pred HHHhCCceeEEcccCCCcccCcCCChhHHHHh-hhcC------CeEEEEecccccc-cccccccceEEEEc
Q 023599 217 LMRLKRLLPFFDCAYQGFVMNMDADALPVRMF-VADG------GECLVAQSYSKTM-GLYGERVGALSVVR 279 (280)
Q Consensus 217 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~------~~~i~~~S~SK~~-~~~G~RvG~~v~~~ 279 (280)
+|.+++++++.||+|++-+|.......+++-. ..++ ..++.++|.||.+ |-+|.|-||+-+.+
T Consensus 243 fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n 313 (475)
T KOG0258|consen 243 FAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLN 313 (475)
T ss_pred HHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeeccc
Confidence 99999999999999999999655444444332 2222 2678999999998 55999999987643
No 110
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.95 E-value=4.4e-26 Score=209.40 Aligned_cols=230 Identities=8% Similarity=-0.015 Sum_probs=170.0
Q ss_pred ccccCCChHHHHHHHhhcCCCCCeeEeecceee-cCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHH
Q 023599 21 VARAADIPIYAVMAAFREDPSPMKLNLGFGVYR-TEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLI 99 (280)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l 99 (280)
++......+.+..+.++ ..+.++++|++|+|. |....+.......+..+.+. .+ ..+|.+..|.++||+++++++
T Consensus 16 v~~~~~~~~~~~~~~l~-~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~--~g-~~~Y~~~~g~~~Lreaia~~~ 91 (460)
T PRK13238 16 VEPIRLTTREERERALA-EAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMM--RG-DEAYAGSRSYYRLEDAVKDIF 91 (460)
T ss_pred eccccccCHHHHHHHHH-HcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHH--hC-CcccCCCCCHHHHHHHHHHHh
Confidence 44444445556666663 356799999999973 44433322222333333343 23 457999999999999999997
Q ss_pred hCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecC------CCC-
Q 023599 100 FGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDP------KTN- 172 (280)
Q Consensus 100 ~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~------~~~- 172 (280)
.. +++++ |+||++|+.++ +.++++||| |++++|.|..|...+...|++++.+++... +.|
T Consensus 92 ~~--------~~vv~--t~ggt~A~~~~--~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~ 158 (460)
T PRK13238 92 GY--------PYTIP--THQGRAAEQIL--FPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFK 158 (460)
T ss_pred CC--------CcEEE--CCCHHHHHHHH--HHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEecccccccccccccc
Confidence 32 45666 99999999999 888899999 999999999999999999999999998311 234
Q ss_pred -CcCHHHHHHHHhcCC-CCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHhCCceeEEcccC--CCcccCcC----CChh
Q 023599 173 -GLDFQGMLQDLGAAP-SGAIVLLQASGHNPTG-IDPTAQQWEQIRQLMRLKRLLPFFDCAY--QGFVMNMD----ADAL 243 (280)
Q Consensus 173 -~~d~~~l~~~~~~~~-~~~~~v~~~~p~NPTG-~~~~~~~l~~i~~~~~~~~~~ii~De~y--~~~~~~~~----~~~~ 243 (280)
.+|++.|++.+.+++ ++.+++++++|||||| .+++.+++++|.++|++||++||+|+++ ....|... ....
T Consensus 159 g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~ 238 (460)
T PRK13238 159 GNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDK 238 (460)
T ss_pred CCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCC
Confidence 499999999998642 3456899999999998 9999999999999999999999999966 22333210 0111
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccc
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLYGERVG 273 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 273 (280)
++..+ ++.++|++|.+.++|||+|
T Consensus 239 si~~i------~~~~~s~~D~~~~Sg~K~g 262 (460)
T PRK13238 239 SIKEI------AREMFSYADGLTMSAKKDA 262 (460)
T ss_pred CHHHH------hhhhcccCcEEEEecccCC
Confidence 22222 4456899999999999984
No 111
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=6e-25 Score=195.29 Aligned_cols=218 Identities=20% Similarity=0.229 Sum_probs=163.3
Q ss_pred eEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHH
Q 023599 45 LNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSL 124 (280)
Q Consensus 45 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al 124 (280)
+||+.|.+ .....+..+....+. . .......|.+..|..++++.+++++....+....++++++ ++|+++++
T Consensus 1 ~~~~~~~~----~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~t~a~ 72 (350)
T cd00609 1 IDLSIGEP----DFPPPPEVLEALAAA-A-LRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVV--TNGAQEAL 72 (350)
T ss_pred CCCCCCCC----CCCCCHHHHHHHHHH-h-hccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEE--ecCcHHHH
Confidence 57888885 222333333333321 1 1334567889999999999999998766443334577887 99999999
Q ss_pred HHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCH--HHHHHHHhcCCCCcEEEEecCCCCCC
Q 023599 125 RIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDF--QGMLQDLGAAPSGAIVLLQASGHNPT 202 (280)
Q Consensus 125 ~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~--~~l~~~~~~~~~~~~~v~~~~p~NPT 202 (280)
..+ +..+..+||+|++++|+|..+...++..|.+++.++. ++ +...+. +.++....++ ..++++++|+|||
T Consensus 73 ~~~--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~-~~-~~~~~~~~~~~~~~~~~~---~~~v~i~~~~~~t 145 (350)
T cd00609 73 SLL--LRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPL-DE-EGGFLLDLELLEAAKTPK---TKLLYLNNPNNPT 145 (350)
T ss_pred HHH--HHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEec-cc-ccCCccCHHHHHhhcCcc---ceEEEEECCCCCC
Confidence 999 7777789999999999999999999999999999998 33 333333 5555544333 3477777899999
Q ss_pred CCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 203 GIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 203 G~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
|.+++.+++++|+++|+++|+++|+|++|..+.+...... .....+.....++++|+||.++.+|.|+||+++..
T Consensus 146 G~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~ 220 (350)
T cd00609 146 GAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPP--ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP 220 (350)
T ss_pred CcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccc--cccCcCccCcEEEEeecccccCCcccceEEEecCH
Confidence 9999999999999999999999999999998887432110 01112334578999999999998999999998753
No 112
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.90 E-value=7.6e-23 Score=185.84 Aligned_cols=217 Identities=12% Similarity=0.032 Sum_probs=158.1
Q ss_pred CCCCeeEeecceee-cCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYR-TEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+.+.+.|..+++. |....+.......+..+.+. .+ ...|.+..|.++|++++++++.. +++++ |+
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~--~g-d~~Y~~~~g~~~Leeaia~~~g~--------~~vv~--t~ 75 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMM--LG-DEAYAGSKSFYDLEDAVQDLFGF--------KHIIP--TH 75 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHH--hC-CCccCCCCCHHHHHHHHHHHHCC--------CeEEE--cC
Confidence 45678888888751 11111111112222223333 23 24599999999999999999732 45666 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecC--------CCCCcCHHHHHHHHhcC-CCC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDP--------KTNGLDFQGMLQDLGAA-PSG 189 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~--------~~~~~d~~~l~~~~~~~-~~~ 189 (280)
||++|+.++ +.+++.|||+| +++|.|..+...+...|++++.+++... .++.+|++.+++++.++ +++
T Consensus 76 ~Gt~Al~la--~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~ 152 (431)
T cd00617 76 QGRGAENIL--FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAEN 152 (431)
T ss_pred CHHHHHHHH--HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCC
Confidence 999999999 88889999988 6999999999999999999999998312 12459999999999866 233
Q ss_pred cEEEEecCCCCCC-CCCCCHHHHHHHHHHHHhCCceeEEcccCCC--cccC----cCCChhHHHHhhhcCCeEEEEeccc
Q 023599 190 AIVLLQASGHNPT-GIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG--FVMN----MDADALPVRMFVADGGECLVAQSYS 262 (280)
Q Consensus 190 ~~~v~~~~p~NPT-G~~~~~~~l~~i~~~~~~~~~~ii~De~y~~--~~~~----~~~~~~~~~~~~~~~~~~i~~~S~S 262 (280)
..+|++++||||+ |+.++.+++++|.++|++||++||+|++... ..+- +.....++. +.++.+.|+|
T Consensus 153 ~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~------ei~~e~~s~s 226 (431)
T cd00617 153 IPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA------EIAREMFSYA 226 (431)
T ss_pred ccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH------HHHHHhhccC
Confidence 4588889999998 9999999999999999999999999999421 1220 011111122 2356689999
Q ss_pred ccccccccc------cceEEEE
Q 023599 263 KTMGLYGER------VGALSVV 278 (280)
Q Consensus 263 K~~~~~G~R------vG~~v~~ 278 (280)
|.+.+.||| -||++..
T Consensus 227 d~~~mS~~K~~~~~~GG~i~~~ 248 (431)
T cd00617 227 DGCTMSAKKDGLVNIGGFLALR 248 (431)
T ss_pred CEEEEEeecCCCCccceEEEeC
Confidence 999999999 4477654
No 113
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=5.8e-23 Score=171.25 Aligned_cols=235 Identities=16% Similarity=0.128 Sum_probs=168.0
Q ss_pred HHHHHHHhhc-CCCCCeeEeecceeecCCCCccchHHHHHHHHHHhccC---CCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q 023599 29 IYAVMAAFRE-DPSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDL---SADKEYLPITGLPEFNKLSAKLIFGADS 104 (280)
Q Consensus 29 ~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~y~~~~G~~~lr~~ia~~l~~~~~ 104 (280)
|..+|+.+.. -+.+..|.|+-|.| ...|...+.++....++..++ ....+|..++|...|.+++++.+.++++
T Consensus 16 i~~lMdDl~d~Lrt~g~imLggGNP---a~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 16 ITQLMDDLNDGLRTPGAIMLGGGNP---ARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred HHHHHHHHHhhccCCCceeeCCCCc---ccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 5667766642 23456899999997 444566666776666665433 2346799999999999999999999999
Q ss_pred ccccCCCeEEeecccchhHHHHHHHHHH-hhcCC--CEEEEe-CCCCCChHHHHHHcCCeee---EEEeecC--CCCCcC
Q 023599 105 PAIKENRVSTVQCLSGSGSLRIGADFLA-KHYYQ--HTVYLS-QPTYGNHPNFFAAAGLAMK---TYHYYDP--KTNGLD 175 (280)
Q Consensus 105 ~~~~~~~i~~v~t~g~~~al~~~~~~~~-~~~~G--d~Vli~-~P~y~~~~~~~~~~G~~~~---~v~~~~~--~~~~~d 175 (280)
+.+++.||.+ |+|++.+++.++++++ ....| .+|+.| .|.|.+|..+.-.-..-|. .+...+. -.+.+|
T Consensus 93 wnit~~NIal--TnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vD 170 (417)
T COG3977 93 WNITAQNIAL--TNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVD 170 (417)
T ss_pred CCCccceeee--cCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccC
Confidence 9999999999 9999999999866554 22245 357766 6899888654321111010 0111111 126678
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeE
Q 023599 176 FQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGEC 255 (280)
Q Consensus 176 ~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 255 (280)
++.+.-. +. ..++|++.|.||||.+++.+|+.+|-++|++||+.+|+|.+|+.-..+- -..-+..+ .++|+
T Consensus 171 F~~l~i~--e~---~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~i--ifsd~~~~--w~~Ni 241 (417)
T COG3977 171 FEHLHIG--ES---TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGI--IFSDATPL--WNENI 241 (417)
T ss_pred HHHcccc--cc---cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCce--eccccccc--CCCCE
Confidence 8877653 33 3489999999999999999999999999999999999999996543321 00000111 45799
Q ss_pred EEEecccccccccccccceEEEE
Q 023599 256 LVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 256 i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
|.+.|+|| .|+||.|+|.++.-
T Consensus 242 ilC~SLSK-~GLPG~R~GIiIan 263 (417)
T COG3977 242 ILCMSLSK-LGLPGSRCGIIIAN 263 (417)
T ss_pred EEEeehhh-cCCCCcceeEEEcc
Confidence 99999999 58999999988753
No 114
>PRK07049 methionine gamma-lyase; Validated
Probab=99.89 E-value=3.2e-22 Score=182.62 Aligned_cols=170 Identities=18% Similarity=0.131 Sum_probs=131.1
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH----HH
Q 023599 81 EYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF----AA 156 (280)
Q Consensus 81 ~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~----~~ 156 (280)
++++......|++.+|++.. .+++++ ++||++|+.++ +.+++.+||+|++++|+|+.+...+ ..
T Consensus 78 ~R~~~Pt~~~Le~~lA~leg--------~~~~iv--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~ 145 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYEG--------AESAAL--FSSGMSAIATT--LLAFVRPGDVILHSQPLYGGTETLLAKTFRN 145 (427)
T ss_pred cCCCCcCHHHHHHHHHHHhC--------CCcEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHHh
Confidence 34455567899999999852 145666 99999999999 8888999999999999999997664 45
Q ss_pred cCCeeeEEEeecCCCCCcCHHHHHHHHhcC--CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh---CCceeEEcccC
Q 023599 157 AGLAMKTYHYYDPKTNGLDFQGMLQDLGAA--PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRL---KRLLPFFDCAY 231 (280)
Q Consensus 157 ~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~--~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~---~~~~ii~De~y 231 (280)
.|++++.++. ..|.+.+++.+.+. ..+.+++++++|+||||.+++.+++.+|++.|+. +++++|+||+|
T Consensus 146 ~Gi~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety 219 (427)
T PRK07049 146 FGVGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTL 219 (427)
T ss_pred cCcEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCc
Confidence 7888776653 24677888777532 1234589999999999999999999999998654 68999999998
Q ss_pred CCcccCcCCChhHHHHhhhcCCeEEEEeccccccc-ccccccceEEEE
Q 023599 232 QGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG-LYGERVGALSVV 278 (280)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~v~~ 278 (280)
....... + + .. ...|+++||||.|+ .+|+|+||++..
T Consensus 220 ~~~~~~~--p------l-~~-g~divv~S~SK~~gG~~glr~G~vv~~ 257 (427)
T PRK07049 220 LGPVFQK--P------L-EH-GADLSVYSLTKYVGGHSDLVAGAVLGR 257 (427)
T ss_pred cccccCC--c------c-cc-CCCEEEEcCceeecCCCCcEEEEEECC
Confidence 7654321 1 1 22 24578889999998 699999999853
No 115
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.89 E-value=1.4e-21 Score=177.34 Aligned_cols=207 Identities=12% Similarity=0.010 Sum_probs=150.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCC---CC----HHHHHHHHHHHhCCCCccccCCCe
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPIT---GL----PEFNKLSAKLIFGADSPAIKENRV 112 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~---G~----~~lr~~ia~~l~~~~~~~~~~~~i 112 (280)
.+.+.|+|+.|+| .+.+.+++.++++.+.+. .. ..+|++.. |. .+|++++|+++.. +++
T Consensus 36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~--~~-~~~~~~s~~~~G~~~~~~~le~~ia~~~g~--------~~~ 101 (393)
T TIGR01822 36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALD--EH-GFGMSSVRFICGTQDIHKELEAKIAAFLGT--------EDT 101 (393)
T ss_pred CCceEEEeeCCCc---cccCCCHHHHHHHHHHHH--Hh-CCCCCCcCcccCChHHHHHHHHHHHHHhCC--------CcE
Confidence 4568899999987 455556666666666554 21 13566665 76 7899999999742 455
Q ss_pred EEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC---CCC
Q 023599 113 STVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA---PSG 189 (280)
Q Consensus 113 ~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~---~~~ 189 (280)
++ ++|+++|+..+ +.+++.+||+|++++|.|..+...++..+.+...++ ..|++.+++++.+. ..+
T Consensus 102 ii--~~~~~~a~~~~--~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~ 170 (393)
T TIGR01822 102 IL--YASCFDANGGL--FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGAR 170 (393)
T ss_pred EE--ECchHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCC
Confidence 66 88999999988 777889999999999999999888887777664432 26899999988752 114
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc-CCeEEEEeccccccccc
Q 023599 190 AIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD-GGECLVAQSYSKTMGLY 268 (280)
Q Consensus 190 ~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~ 268 (280)
.++|++++++||||.+.+ +++|+++|++||+++|+||+|........ .. ......+. ....++++|+||.+ +
T Consensus 171 ~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~-~~-~~~~~~~~~~~~di~~~s~sK~l--~ 243 (393)
T TIGR01822 171 HRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPT-GR-GSHELCGVMGRVDIITGTLGKAL--G 243 (393)
T ss_pred ceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCC-CC-chHHhcCCCCCCeEEEEEChHHh--h
Confidence 568888889999999875 67789999999999999999954333211 11 11222222 23568899999986 4
Q ss_pred ccccceEEEE
Q 023599 269 GERVGALSVV 278 (280)
Q Consensus 269 G~RvG~~v~~ 278 (280)
|+|+||++++
T Consensus 244 g~r~G~~~~~ 253 (393)
T TIGR01822 244 GASGGFTTAR 253 (393)
T ss_pred CCCcEEEEeC
Confidence 7999998765
No 116
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.89 E-value=8.5e-22 Score=178.70 Aligned_cols=215 Identities=11% Similarity=-0.033 Sum_probs=147.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+.+.|+|+.|.+ .+.+.++...+.+.+.+.........|....|.+++++++++++....+. +++|++ |+|
T Consensus 40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~--tsG 111 (397)
T PRK06939 40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILY--SSC 111 (397)
T ss_pred CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEE--cCh
Confidence 4568999999875 34444555555555544421111112333568888888888876554332 256665 666
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC---CCCcEEEEec
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA---PSGAIVLLQA 196 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~v~~~ 196 (280)
++++..+ +.+++.+||+|++++|+|+.+...++..|++++.++. .|++.+++.+.+. ..+.++++..
T Consensus 112 -~~a~~~~--~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~ 181 (397)
T PRK06939 112 -FDANGGL--FETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATD 181 (397)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEe
Confidence 7788888 7777899999999999999998888888988877764 4788888888642 1244577777
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc-CCeEEEEecccccccccccccceE
Q 023599 197 SGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD-GGECLVAQSYSKTMGLYGERVGAL 275 (280)
Q Consensus 197 ~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~~ 275 (280)
+.+||||.. +++++|+++|++++++||+||+|........ .... ....+. ....++++||||.++ |+|+||+
T Consensus 182 ~v~~~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~-~~~~-~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v 254 (397)
T PRK06939 182 GVFSMDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGEN-GRGT-VEHFGVMDRVDIITGTLGKALG--GASGGYT 254 (397)
T ss_pred cCcCCCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCC-CCCH-HHHcCCCCCCcEEEEECHHHhC--ccCceEE
Confidence 788999974 4578889999999999999999963222211 1111 111122 235699999999994 6799999
Q ss_pred EEEc
Q 023599 276 SVVR 279 (280)
Q Consensus 276 v~~~ 279 (280)
+++.
T Consensus 255 ~~~~ 258 (397)
T PRK06939 255 AGRK 258 (397)
T ss_pred EeCH
Confidence 8753
No 117
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.89 E-value=2.1e-21 Score=173.66 Aligned_cols=210 Identities=13% Similarity=-0.008 Sum_probs=144.0
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCC----CHHHHHHHHHHHhCCCCccccCCCeEEe
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITG----LPEFNKLSAKLIFGADSPAIKENRVSTV 115 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G----~~~lr~~ia~~l~~~~~~~~~~~~i~~v 115 (280)
.+.++|||+.|.+ -+++.+++.++.+.+.+..-......|....| ..++++++++++.. ++++++
T Consensus 14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~- 82 (360)
T TIGR00858 14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-------EAALLF- 82 (360)
T ss_pred CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-------CCEEEE-
Confidence 4568999999864 24334455555444444310111111222233 45688899888631 255654
Q ss_pred ecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC-CCcEEEE
Q 023599 116 QCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP-SGAIVLL 194 (280)
Q Consensus 116 ~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-~~~~~v~ 194 (280)
++| ++++..+ +..++.+||+|++++|+|..+...++..|++++.++. +|++.+++.+.+.+ .+.++++
T Consensus 83 -~~G-~~~~~~~--l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~ 151 (360)
T TIGR00858 83 -SSG-YLANVGV--ISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIV 151 (360)
T ss_pred -Cch-HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEE
Confidence 665 5555555 5566789999999999999999999999998887764 58899999887643 2346888
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC-CChhHHHHhhhcCCeEEEEecccccccccccccc
Q 023599 195 QASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD-ADALPVRMFVADGGECLVAQSYSKTMGLYGERVG 273 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 273 (280)
+++++||||...+ +++|.++|++++++||+||+|..+.++.. ....+...+ +..+++|+++||||.|+++| |
T Consensus 152 ~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~g---G 224 (360)
T TIGR00858 152 TDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGL-KPEPVDIQVGTLSKALGSYG---A 224 (360)
T ss_pred EeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCC-CccCCcEEEEechhhhhccC---c
Confidence 8999999998766 56778899999999999999987765421 111111111 12357999999999999766 9
Q ss_pred eEEEE
Q 023599 274 ALSVV 278 (280)
Q Consensus 274 ~~v~~ 278 (280)
|++..
T Consensus 225 ~~~~~ 229 (360)
T TIGR00858 225 YVAGS 229 (360)
T ss_pred EEEcC
Confidence 98764
No 118
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.6e-23 Score=171.43 Aligned_cols=171 Identities=18% Similarity=0.111 Sum_probs=142.3
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCC-CEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQ-HTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~G-d~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
...++.++++- -+.++++|++ ..|+-+.++++ +...+.|| ++|+.-.|+|.-|.--+...+++++.+|+
T Consensus 71 nk~ls~a~~~d------kpLt~dnic~--GvGsDE~ID~i--iR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl 140 (375)
T KOG0633|consen 71 NKRLSDALAQD------KPLTSDNICV--GVGSDELIDLI--IRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPL 140 (375)
T ss_pred cchhhhhcccC------CCCCccceEE--ecCcHHHHHHH--HhheecCCccceeecCCcceeEEEEeecCCceEEEecC
Confidence 44555555443 2456799998 99999999999 88889999 89999999999998777888999999998
Q ss_pred ecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHH
Q 023599 167 YDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVR 246 (280)
Q Consensus 167 ~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 246 (280)
..+|.++.|.+.+.+... .+.+++++++|+||||..+..+++++|.+.-. |.++++||+|.+|..... . .
T Consensus 141 --~pdF~lnvdai~evl~~d-s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S--~---~ 210 (375)
T KOG0633|consen 141 --NPDFSLNVDAIAEVLELD-SKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVES--R---M 210 (375)
T ss_pred --CCCccccHHHHHHHHhcc-ccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeeccccc--c---c
Confidence 447999999999988765 34558999999999999999999999987554 789999999999987421 1 3
Q ss_pred HhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 247 MFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 247 ~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.+....+|++++.+|||+||++|+|+||-..+
T Consensus 211 ~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~ 242 (375)
T KOG0633|consen 211 KLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP 242 (375)
T ss_pred hHhHhCCceeehhhhhhhcCcceeEeeccccc
Confidence 44566789999999999999999999997654
No 119
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.88 E-value=2.5e-21 Score=175.12 Aligned_cols=214 Identities=14% Similarity=0.045 Sum_probs=150.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+.+.+||+.|.+ .+.+.++...+...+.+.+.......|....|..++++++++++....+. ++.+++ ++|
T Consensus 31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~--~sG 102 (385)
T TIGR01825 31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVF--QSG 102 (385)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEE--CcH
Confidence 4578999999874 34434555555554444421112345778889999999999998655432 244554 666
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC-CCcEEEEecCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP-SGAIVLLQASG 198 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-~~~~~v~~~~p 198 (280)
++++..+ +..++.+||.|++++|.|..+...+...|+++..++ .+|++.+++.+.+.. .+.++++++++
T Consensus 103 -~~a~~~a--~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v 172 (385)
T TIGR01825 103 -FNTNQGV--LSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGV 172 (385)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecC
Confidence 6677777 667788999999999999988877777887776553 368888888876542 23558888888
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+||||.+.+ +++|.++|++||+++|+||+|..+.++.... .....+.-..+++++++||||.|+++| ||++..
T Consensus 173 ~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~ 245 (385)
T TIGR01825 173 FSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGR-GTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGH 245 (385)
T ss_pred CcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCC-ccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecC
Confidence 999999877 5678999999999999999998876641111 111111001357899999999998665 998754
No 120
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.88 E-value=1.5e-21 Score=177.15 Aligned_cols=164 Identities=18% Similarity=0.148 Sum_probs=130.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH----H
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF----A 155 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~----~ 155 (280)
..+++..+..+|+++++++... +++++ ++||++|+.++ +.+++.+||+|+++.|.|..+...+ +
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g~--------~~~l~--~~sG~~Ai~~a--l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~ 125 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEGG--------EAAVV--AASGMGAISSS--LWSALKAGDHVVASDTLYGCTFALLNHGLT 125 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHh
Confidence 3334778899999999999642 34455 99999999988 7788899999999999998765543 5
Q ss_pred HcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhC--CceeEEcccCCC
Q 023599 156 AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLK--RLLPFFDCAYQG 233 (280)
Q Consensus 156 ~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~--~~~ii~De~y~~ 233 (280)
..|++++.++. .|++.+++++.++++ +|++++|+||||.+.+ +++|+++|+++ ++++|+|++|..
T Consensus 126 ~~G~~v~~vd~-------~d~e~l~~~i~~~tk---lI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~ 192 (400)
T PRK06234 126 RYGVEVTFVDT-------SNLEEVRNALKANTK---VVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCT 192 (400)
T ss_pred hCCeEEEEECC-------CCHHHHHHHhccCCe---EEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCc
Confidence 68999888876 278999999876654 8889999999999887 66778888886 999999999987
Q ss_pred cccCcCCChhHHHHhhhcCCeEEEEeccccccccccccc-ceEEEE
Q 023599 234 FVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERV-GALSVV 278 (280)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~v~~ 278 (280)
..+.. + + +. ..-+++.|+||.++.+|+|+ ||+++.
T Consensus 193 ~~~~~--~------l-~~-g~Divv~S~sK~l~g~g~~~gG~v~~~ 228 (400)
T PRK06234 193 PYIQR--P------L-QL-GADVVVHSATKYLNGHGDVIAGFVVGK 228 (400)
T ss_pred hhcCC--c------h-hh-CCcEEEeeccccccCCCCceeEEEEec
Confidence 76531 1 1 11 23488999999999899986 988764
No 121
>PLN02242 methionine gamma-lyase
Probab=99.87 E-value=1.9e-21 Score=177.03 Aligned_cols=160 Identities=17% Similarity=0.120 Sum_probs=126.5
Q ss_pred CCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-----HcC
Q 023599 84 PITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-----AAG 158 (280)
Q Consensus 84 ~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-----~~G 158 (280)
+.....+|++.++++... +.+++ ++||++|+.++ +.+++.+||+|+++.|.|+.+...+. ..|
T Consensus 74 ~~Pt~~~LE~~lA~l~g~--------~~~l~--~~sG~~Ai~~a--l~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGT--------EAAYC--TASGMSAISSV--LLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCN 141 (418)
T ss_pred CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccC
Confidence 345577899999998532 44555 99999999999 88889999999999999988876653 367
Q ss_pred CeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 159 LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 159 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
++++.++. .|++.++++++++ +.++|++++|+||||.+. ++++|+++|++++++||+|++|..+.++.
T Consensus 142 ~~~~~~d~-------~d~e~l~~~i~~~--~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~ 209 (418)
T PLN02242 142 ITTTFVDI-------TDLEAVKKAVVPG--KTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP 209 (418)
T ss_pred ceEEEcCC-------CCHHHHHHhcCcC--CCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH
Confidence 77766654 3789999988763 123888999999999887 47788999999999999999998776532
Q ss_pred CCChhHHHHhhhcCCeEEEEeccccccccccccc-ceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERV-GALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~v~~ 278 (280)
.. . ...|+++||||.++.+|+|+ ||+++.
T Consensus 210 -------~~---~-g~divv~S~SK~l~g~g~~~gG~iv~~ 239 (418)
T PLN02242 210 -------AR---L-GADVVVHSISKFISGGADIIAGAVCGP 239 (418)
T ss_pred -------HH---c-CCcEEEEeCccccCCCCCceEEEEEcC
Confidence 11 1 24588999999999999985 888754
No 122
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.86 E-value=3e-20 Score=168.90 Aligned_cols=163 Identities=15% Similarity=0.014 Sum_probs=125.8
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh----hcCCCEEEEeCCCCCC----hHHHHHHcCC
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK----HYYQHTVYLSQPTYGN----HPNFFAAAGL 159 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~----~~~Gd~Vli~~P~y~~----~~~~~~~~G~ 159 (280)
.+++|+.+++++... .+++|++ |+|++++++++ +.++ +.+||+|++++|.|+. +...++..|+
T Consensus 62 ~~~~r~~la~~~g~~-----~~~~i~~--t~g~t~~l~~~--~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~ 132 (398)
T TIGR03392 62 YELARQQVARFLNAP-----DAENIVW--TRGTTESINLV--AQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGA 132 (398)
T ss_pred HHHHHHHHHHHhCCC-----CCCeEEE--eCChHHHHHHH--HHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCc
Confidence 467999999987432 2478888 99999999999 5554 4789999999999865 4555678899
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
+++.++. + .++.+|++.+++++.++++ ++++++|+||||.+++ +++|+++|+++|+++++|++|.......
T Consensus 133 ~v~~v~~-~-~~~~~~~~~l~~~i~~~t~---lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~~- 203 (398)
T TIGR03392 133 KVVKLPI-G-ADLLPDIRQLPELLTPRTR---ILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGPP- 203 (398)
T ss_pred EEEEEec-C-CCCCcCHHHHHHHhccCce---EEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCCC-
Confidence 9999998 3 3456899999999976654 8889999999999987 4567889999999999999996554421
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+ +. +.+ --+++.|.+|.+|.+| +||+++.
T Consensus 204 -~---~~---~~~-~d~~~~s~~K~~gp~G--~G~l~~~ 232 (398)
T TIGR03392 204 -D---VQ---ALD-IDFYAFSGHKLYGPTG--IGVLYGK 232 (398)
T ss_pred -C---hh---hcC-CCEEEEecccccCCCc--eEEEEEc
Confidence 1 11 111 2356778889998665 8999865
No 123
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.86 E-value=5.2e-20 Score=166.28 Aligned_cols=210 Identities=14% Similarity=0.027 Sum_probs=141.0
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCC----CHHHHHHHHHHHhCCCCccccCCCeEEe
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITG----LPEFNKLSAKLIFGADSPAIKENRVSTV 115 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G----~~~lr~~ia~~l~~~~~~~~~~~~i~~v 115 (280)
.+.+.|||+.|++ .++..++..+++..+.+..-......|....| ..++++++++++. .++.++
T Consensus 37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~-- 104 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG-------AERALL-- 104 (385)
T ss_pred CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCcEEE--
Confidence 5678999999863 23323344444444444310100112222334 3566677777652 124444
Q ss_pred ecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEe
Q 023599 116 QCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQ 195 (280)
Q Consensus 116 ~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~ 195 (280)
+++|++++..+ +..++.+||+|++++|.|+.+...++..|++++.++. .|++.+++.+++..++.+++++
T Consensus 105 -~~~g~~~~~~~--l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~ 174 (385)
T PRK05958 105 -FSSGYAANLAV--LTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVT 174 (385)
T ss_pred -ECcHHHHHHHH--HHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEE
Confidence 55566676666 5667889999999999999999888888998888775 3789999988754223457778
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc-CCChhHHHHhhhcCCeEEEEecccccccccccccce
Q 023599 196 ASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM-DADALPVRMFVADGGECLVAQSYSKTMGLYGERVGA 274 (280)
Q Consensus 196 ~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~ 274 (280)
++++||||...+ +++|+++|++||+++|+||+|....+.. .........+ +...++|++.|+||.|+.+| ||
T Consensus 175 ~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G---g~ 247 (385)
T PRK05958 175 ESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGL-AGEPDVILVGTLGKALGSSG---AA 247 (385)
T ss_pred EecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCC-CCCCceEEEEechhhcccCC---cE
Confidence 889999997665 6778899999999999999997765531 1111111112 23458999999999998777 88
Q ss_pred EEEE
Q 023599 275 LSVV 278 (280)
Q Consensus 275 ~v~~ 278 (280)
++..
T Consensus 248 ~~~~ 251 (385)
T PRK05958 248 VLGS 251 (385)
T ss_pred EEcC
Confidence 7654
No 124
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.85 E-value=3.3e-20 Score=164.80 Aligned_cols=173 Identities=13% Similarity=0.072 Sum_probs=129.0
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH---HHHHc
Q 023599 81 EYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN---FFAAA 157 (280)
Q Consensus 81 ~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~---~~~~~ 157 (280)
.|++..+..++++.+++++. ++++++ +.||++++.++ +.+++.+||+|+++.|+|..+.. ..+..
T Consensus 27 ~~~~~~~~~~l~~~~a~~~g--------~~~~~~--~~~gt~a~~~~--~~~l~~~gd~v~~~~~~~~~~~~~~~~~~~~ 94 (338)
T cd06502 27 VYGEDPTTAKLEARAAELFG--------KEAALF--VPSGTAANQLA--LAAHTQPGGSVICHETAHIYTDEAGAPEFLS 94 (338)
T ss_pred ccCCCHHHHHHHHHHHHHhC--------CCeEEE--ecCchHHHHHH--HHHhcCCCCeEEEecCcceeeecCCcHHHHc
Confidence 57777778899999999864 255666 88889999988 77778899999999999865432 34457
Q ss_pred CCeeeEEEeecCCCCCcCHHHHHHHHhcCC----CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC
Q 023599 158 GLAMKTYHYYDPKTNGLDFQGMLQDLGAAP----SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG 233 (280)
Q Consensus 158 G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~ 233 (280)
|++++.++. +. +.+|++.+++++.+.. .+..++++++|||| |.+++.+++++|+++|+++|+++|+|++|..
T Consensus 95 g~~~~~v~~-~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~ 170 (338)
T cd06502 95 GVKLLPVPG-EN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLA 170 (338)
T ss_pred CceEEeecC-CC--CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHH
Confidence 999999987 22 5799999999987521 13458889999998 6677999999999999999999999999864
Q ss_pred cccC-cCCChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 234 FVMN-MDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 234 ~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
+... ... ++... ..+.++ ++.|+||.|+++| |++++
T Consensus 171 ~~~~~~~~---~~~~~-~~~~d~-~~~s~sK~~~~~~---g~~~~ 207 (338)
T cd06502 171 NAAAALGV---ALKTY-KSGVDS-VSFCLSKGGGAPV---GAVVV 207 (338)
T ss_pred HHHHhcCC---CHHHH-HhcCCE-EEEeccccCCCcc---ceEEE
Confidence 4221 111 11222 122344 5779999999887 66443
No 125
>PRK10534 L-threonine aldolase; Provisional
Probab=99.84 E-value=1.8e-20 Score=166.43 Aligned_cols=200 Identities=14% Similarity=0.065 Sum_probs=133.9
Q ss_pred eEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHH
Q 023599 45 LNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSL 124 (280)
Q Consensus 45 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al 124 (280)
|+|+..+ +.. |.+.+.++..+.. .. ...|+|..+..+|++++++++.. +.+++ +.||++++
T Consensus 2 ~~~~~~~----~~~--p~~~~~~a~~~~~--~~-~~~Y~~~~~~~~L~~~la~~~g~--------~~~~v--~~~g~~a~ 62 (333)
T PRK10534 2 IDLRSDT----VTR--PSRAMLEAMMAAP--VG-DDVYGDDPTVNALQDYAAELSGK--------EAALF--LPTGTQAN 62 (333)
T ss_pred ccccccc----CCC--CCHHHHHHHHhcc--CC-CcccCCCHHHHHHHHHHHHHhCC--------CeEEE--eCchHHHH
Confidence 5677655 432 5555555554433 22 34687888899999999999521 33445 88888888
Q ss_pred HHHHHHHHhhcCCCEEEEeCCCCCC-hHHH-HHHcC-CeeeEEEeecCCCCCcCHHHHHHHHhcCC---CCcEEEEecCC
Q 023599 125 RIGADFLAKHYYQHTVYLSQPTYGN-HPNF-FAAAG-LAMKTYHYYDPKTNGLDFQGMLQDLGAAP---SGAIVLLQASG 198 (280)
Q Consensus 125 ~~~~~~~~~~~~Gd~Vli~~P~y~~-~~~~-~~~~G-~~~~~v~~~~~~~~~~d~~~l~~~~~~~~---~~~~~v~~~~p 198 (280)
.++ +...+.+||+|+++.|+|.. |... ....| ++++.++. .+++.+|++.+++++.++. .+..+++++||
T Consensus 63 ~~~--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np 138 (333)
T PRK10534 63 LVA--LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA--AADGTLPLDKVAAKIKPDDIHFARTRLLSLENT 138 (333)
T ss_pred HHH--HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecC--CCCCCCCHHHHHHhhcccCcCcccceEEEEecC
Confidence 887 67778899999999888752 3221 23333 67777776 3467899999999886521 02347888765
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc-CCChhHHHHhhhcCCeEEEEecccccccccccccce-EE
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM-DADALPVRMFVADGGECLVAQSYSKTMGLYGERVGA-LS 276 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~-~v 276 (280)
+ ||.+++.+++++|+++|+++++++++||+|....... ... ...+....++++ .||||.|+++ +|| ++
T Consensus 139 ~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~---~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~ 208 (333)
T PRK10534 139 H--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCE---LKEITQYCDSFT--ICLSKGLGTP---VGSLLV 208 (333)
T ss_pred C--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCC---HHHHHhcCCEEE--EEeEcCCCCc---ccceEE
Confidence 5 6999999999999999999999999999986221100 111 122222223333 3899998864 885 54
Q ss_pred E
Q 023599 277 V 277 (280)
Q Consensus 277 ~ 277 (280)
.
T Consensus 209 ~ 209 (333)
T PRK10534 209 G 209 (333)
T ss_pred c
Confidence 3
No 126
>PLN02721 threonine aldolase
Probab=99.84 E-value=6.8e-20 Score=163.71 Aligned_cols=204 Identities=16% Similarity=0.071 Sum_probs=134.5
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
.+++|+.+.+ . .+.+.+.++...... ......|.+ ...+|++++++++.. +.+++ +++|++
T Consensus 6 ~~~~~~~~~~----~--~~~~~~~~a~~~~~~-~~~~~~~~~--~~~~l~~~la~~~~~--------~~~~~--~~~Gs~ 66 (353)
T PLN02721 6 RVVDLRSDTV----T--KPTDAMRAAMANAEV-DDDVLGYDP--TALRLEEEMAKIFGK--------EAALF--VPSGTM 66 (353)
T ss_pred hhhhhhcccc----c--CCCHHHHHHHHhccC-CCcccCCCH--HHHHHHHHHHHHhCC--------ceeEE--ecCccH
Confidence 4678988885 2 244555555544311 111233333 378999999999742 22344 666677
Q ss_pred HHHHHHHHHHhhc-CCCEEEEeCCCCCChHH---HHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC----CCCcEEEE
Q 023599 123 SLRIGADFLAKHY-YQHTVYLSQPTYGNHPN---FFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA----PSGAIVLL 194 (280)
Q Consensus 123 al~~~~~~~~~~~-~Gd~Vli~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~----~~~~~~v~ 194 (280)
+..++ +...+. +||+|++++|+|..... .+...|++++.++. ++++.+|++.+++.+.+. .++.++++
T Consensus 67 a~~~~--l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 67 GNLIS--VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKN--NEDGTMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred HHHHH--HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCC--CcCCCcCHHHHHHHHHhccCCCCCcceEEE
Confidence 76666 566666 99999999999853333 56678999999987 345678999999999732 01233666
Q ss_pred ecC-CCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC-cCCChhHHHHhhhcCCeEEEEeccccccccccccc
Q 023599 195 QAS-GHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN-MDADALPVRMFVADGGECLVAQSYSKTMGLYGERV 272 (280)
Q Consensus 195 ~~~-p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv 272 (280)
+++ +|||||.+++.+++++|+++|+++|+++|+|++|...... ...+ ...+....+. ++.|+||.|+. ++
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~---~~~~~~~~d~--~~~s~sK~l~~---~~ 214 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVP---VHRLVKAADS--VSVCLSKGLGA---PV 214 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCC---HHHHhhhCCE--EEEecccccCC---ce
Confidence 644 6899999999999999999999999999999987532211 0111 1222222222 34479999873 47
Q ss_pred ceEEE
Q 023599 273 GALSV 277 (280)
Q Consensus 273 G~~v~ 277 (280)
||+++
T Consensus 215 G~~~~ 219 (353)
T PLN02721 215 GSVIV 219 (353)
T ss_pred eeEEe
Confidence 87443
No 127
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.84 E-value=8.9e-20 Score=163.73 Aligned_cols=165 Identities=12% Similarity=0.033 Sum_probs=129.5
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY 167 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~ 167 (280)
..+|++.+++++. . +++++ |+|+++++.++ +.+++.+||+|+++.++|......++..|++++.++.
T Consensus 46 ~~~l~~~la~~~g-~-------~~i~~--~~g~t~al~~~--l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~- 112 (361)
T cd06452 46 IKDFHHDLAEFLG-M-------DEARV--TPGAREGKFAV--MHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPN- 112 (361)
T ss_pred HHHHHHHHHHHcC-C-------ceEEE--eCCHHHHHHHH--HHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEec-
Confidence 5688999999852 1 67777 99999999999 7777899999999999887776678889999999998
Q ss_pred cCC-CCCcCHHHHHHHHhcCC----CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 168 DPK-TNGLDFQGMLQDLGAAP----SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 168 ~~~-~~~~d~~~l~~~~~~~~----~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
+.+ ++.+|++.+++++.+.. ++..++++++|+||||... ++++|+++|+++++++|+|++|.....+. .
T Consensus 113 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~---~~~~i~~~~~~~~~~vivD~a~~~g~~~~--~- 186 (361)
T cd06452 113 TGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH---DAKKIAKVCHEYGVPLLLNGAYTVGRMPV--S- 186 (361)
T ss_pred CCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec---cHHHHHHHHHHcCCeEEEECCcccCCcCC--C-
Confidence 443 46899999999886421 2345888899999999764 56788899999999999999997433211 0
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.. +. ...++++|+||.++ ++.|+||+++.
T Consensus 187 --~~---~~-~~d~~~~s~~K~l~-~~~~~G~l~~~ 215 (361)
T cd06452 187 --GK---EL-GADFIVGSGHKSMA-ASAPIGVLATT 215 (361)
T ss_pred --HH---Hc-CCCEEEecCCcccc-CCCCeEEEEEC
Confidence 11 12 24588999999998 56699999875
No 128
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.83 E-value=8e-20 Score=166.79 Aligned_cols=162 Identities=17% Similarity=0.151 Sum_probs=126.9
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChH----HHHHHc
Q 023599 82 YLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHP----NFFAAA 157 (280)
Q Consensus 82 y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~----~~~~~~ 157 (280)
+.+..-..+|++.++++... +..++ +++|++|+..+ +.+++.+||+|+++.+.|+... ..++..
T Consensus 53 r~~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a--l~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 120 (418)
T TIGR01326 53 RLMNPTTDVLEQRIAALEGG--------VAALA--VASGQAAITYA--ILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRL 120 (418)
T ss_pred CCCChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHHHHHc
Confidence 33444567899999998532 34455 99999999999 7788899999999999996543 345678
Q ss_pred CCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 158 GLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 158 G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
|++++.++. .|++.+++++.++++ +|++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 121 G~~v~~v~~-------~d~~~l~~~l~~~t~---~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~ 187 (418)
T TIGR01326 121 GIEVRFVDP-------DDPEEFEKAIDENTK---AVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLC 187 (418)
T ss_pred CcEEEEECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcC
Confidence 999888875 178999998876544 7888999999998876 667888999999999999999743221
Q ss_pred cCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 238 MDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+ +. ...+++.|+||.++.+|+|+||+++.
T Consensus 188 --------~~l-~~-g~Divv~S~sK~l~g~G~~lGg~v~~ 218 (418)
T TIGR01326 188 --------RPI-DH-GADIVVHSATKYIGGHGTAIGGVIVD 218 (418)
T ss_pred --------Cch-hc-CCeEEEECccccccCCccceEEEEEe
Confidence 111 22 35689999999999999999999885
No 129
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.83 E-value=8.3e-20 Score=165.61 Aligned_cols=161 Identities=14% Similarity=0.126 Sum_probs=124.0
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH----HHcC
Q 023599 83 LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF----AAAG 158 (280)
Q Consensus 83 ~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~----~~~G 158 (280)
++......|++.+|++... +...+ +++|+.++..+ +...+.+||+|+++.|.|+.+...+ ...|
T Consensus 62 ~~~p~~~~Le~~lA~l~G~--------~~~~~--~~sG~~Ai~~~--l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 129 (398)
T PRK07504 62 YSNPTVDMFEKRMCALEGA--------EDARA--TASGMAAVTAA--ILCQVKAGDHVVAARALFGSCRYVVETLLPRYG 129 (398)
T ss_pred CCCchHHHHHHHHHHHhCC--------CeeeE--ecCHHHHHHHH--HHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC
Confidence 3445578899999998532 22234 77888999877 6777899999999999999765544 3568
Q ss_pred CeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 159 LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 159 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
++++.++. .|++.++++++++++ +|++++|+||||.+++ +++|.++|+++|+++|+|++|....+..
T Consensus 130 ~~v~~vd~-------~d~e~l~~ai~~~tk---lV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~ 196 (398)
T PRK07504 130 IESTLVDG-------LDLDNWEKAVRPNTK---VFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK 196 (398)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCce---EEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC
Confidence 87777752 689999999876655 9999999999999987 5677888999999999999998665421
Q ss_pred CCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+ . +.+ .-+++.|+||.++.+|+|+|++++.
T Consensus 197 --~----~---~~g-aDivv~S~sK~l~g~g~~~GG~vv~ 226 (398)
T PRK07504 197 --P----L---ELG-AHIVVYSATKHIDGQGRCLGGVVLS 226 (398)
T ss_pred --c----h---hhC-CCEEEeeccccccCCccceEEEEEe
Confidence 1 1 222 2467999999999899999876654
No 130
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.83 E-value=1.1e-19 Score=164.52 Aligned_cols=158 Identities=15% Similarity=0.131 Sum_probs=123.8
Q ss_pred CCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHHHcCCee
Q 023599 86 TGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFAAAGLAM 161 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~~~G~~~ 161 (280)
.-...|++.+++++.. +++++ |+||++|+.++ +.+++.+||+|+++.+.|..... .+...|+++
T Consensus 61 p~~~~le~~la~l~g~--------~~~v~--~ssG~~Ai~~a--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v 128 (390)
T PRK08133 61 PTVTMFQERLAALEGA--------EACVA--TASGMAAILAV--VMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIET 128 (390)
T ss_pred hHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEE
Confidence 3466889999988522 45565 99999999998 77888999999999999977554 445689999
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
+.++. .|.+.++++++++++ +|++++|+||||.+.+ +++|+++|+++|+++|+|++|....... +
T Consensus 129 ~~vd~-------~d~~~l~~~i~~~tk---lV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~--p 193 (390)
T PRK08133 129 TFVDL-------TDLDAWRAAVRPNTK---LFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ--P 193 (390)
T ss_pred EEECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC--c
Confidence 98876 268899998876554 8889999999999985 6788899999999999999987654421 1
Q ss_pred hhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
. ..+. -+++.|+||.++.+|+|+|++++.
T Consensus 194 ----l---~~g~-Divv~S~sK~~~g~g~~~GG~vv~ 222 (390)
T PRK08133 194 ----L---KLGA-DVVIHSATKYLDGQGRVLGGAVVG 222 (390)
T ss_pred ----h---hhCC-cEEEeecceeecCCcceEeEEEEc
Confidence 1 1222 367999999999899999666553
No 131
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.83 E-value=1.7e-19 Score=162.61 Aligned_cols=163 Identities=15% Similarity=0.057 Sum_probs=122.9
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH----
Q 023599 81 EYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA---- 156 (280)
Q Consensus 81 ~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~---- 156 (280)
++++......|+++++++.. .+++++ ++|+++|+.++ +.+++.+||+|+++.|+|......+..
T Consensus 46 ~R~~~p~~~~le~~lA~l~g--------~~~v~~--~~gg~~Ai~~~--l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~ 113 (382)
T TIGR02080 46 SRSGNPTRDLLQQALAELEG--------GAGAVV--TNTGMSAIHLV--TTALLGPDDLLVAPHDCYGGTYRLLNALAKK 113 (382)
T ss_pred cCCCCchHHHHHHHHHHHhC--------CCcEEE--EcCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 34455567889999999853 156776 99999999999 788899999999999999876554432
Q ss_pred cCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 157 AGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 157 ~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
.|+++..++. .|++.+++++.++++ +|++++|+||||.+++. ++|+++|+++++++|+|++|.....
T Consensus 114 ~~~~v~~~d~-------~d~~~l~~ai~~~tk---lV~l~~p~NPtG~~~dl---~~I~~la~~~g~~vvvD~a~~~~~~ 180 (382)
T TIGR02080 114 GCFRVLFVDQ-------GDEQALRAALAQKPK---LVLIETPSNPLLRVVDI---AKICHLAKAVGAVVVVDNTFLSPAL 180 (382)
T ss_pred cCeEEEEECC-------CCHHHHHHhcCcCce---EEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCccccc
Confidence 2344443321 378999999876554 88999999999999875 5678889999999999999987654
Q ss_pred CcCCChhHHHHhhhcCCeEEEEeccccccc-ccccccceEEEE
Q 023599 237 NMDADALPVRMFVADGGECLVAQSYSKTMG-LYGERVGALSVV 278 (280)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~v~~ 278 (280)
.. + .. .+. -++++|+||.++ .+|+|.||+++.
T Consensus 181 ~~--p----l~---~ga-Divv~S~sK~l~G~~~~~~G~i~~~ 213 (382)
T TIGR02080 181 QN--P----LA---LGA-DLVLHSCTKYLNGHSDVIAGAVIAK 213 (382)
T ss_pred CC--c----hh---hCC-CEEEeecceeccCCCCceeEEEEeC
Confidence 21 1 11 112 278899999985 578899998763
No 132
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.83 E-value=3.8e-19 Score=161.78 Aligned_cols=163 Identities=15% Similarity=0.048 Sum_probs=125.7
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh----hcCCCEEEEeCCCCCC----hHHHHHHcCC
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK----HYYQHTVYLSQPTYGN----HPNFFAAAGL 159 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~----~~~Gd~Vli~~P~y~~----~~~~~~~~G~ 159 (280)
.+++|+.+++++... .+++|++ |+|+++++.++ +.++ +.+||+|++++|.|+. +...++..|+
T Consensus 65 ~~~~r~~la~~~g~~-----~~~~i~~--~~~~t~~i~~~--~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 135 (401)
T PRK10874 65 YEAAREQVAQLLNAP-----DAKNIVW--TRGTTESINLV--AQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGA 135 (401)
T ss_pred HHHHHHHHHHHcCCC-----CCCEEEE--ECCHHHHHHHH--HHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCC
Confidence 567889999986432 3478888 99999999999 5554 4799999999999864 4555677899
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
+++.++. ++++.+|++.+++.+.++++ ++++++|+||||.+++. ++|+++|+++|+++|+|++|.......
T Consensus 136 ~v~~v~~--~~~~~~d~~~l~~~i~~~t~---lv~i~~~~n~tG~~~~~---~~i~~l~~~~g~~~ivD~a~~~g~~~~- 206 (401)
T PRK10874 136 KVVKLPL--GADRLPDVDLLPELITPRTR---ILALGQMSNVTGGCPDL---ARAITLAHQAGMVVMVDGAQGAVHFPA- 206 (401)
T ss_pred EEEEEec--CCCCcCCHHHHHHhcCcCcE---EEEEeCCcccccCcCCH---HHHHHHHHHcCCEEEEECCcccccccC-
Confidence 9999998 33567899999999976554 88899999999999864 577888999999999999996543321
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+ +. .. .--+++.|++|.||.+| +||+++.
T Consensus 207 -~---~~---~~-~~d~~~~s~~K~~gp~G--~G~l~~~ 235 (401)
T PRK10874 207 -D---VQ---AL-DIDFYAFSGHKLYGPTG--IGVLYGK 235 (401)
T ss_pred -C---ch---hc-CCCEEEEecccccCCCc--cEEEEEc
Confidence 1 11 11 13366799999998776 5888764
No 133
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.83 E-value=3.4e-19 Score=158.89 Aligned_cols=164 Identities=13% Similarity=0.042 Sum_probs=119.8
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY 167 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~ 167 (280)
...+++.+++++.. ++.++ +++|++++.++ +.+++.+||+|++++|.|..+...++..|+++++++.
T Consensus 48 ~~~l~~~la~~~~~--------~~~iv--~~sg~~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~- 114 (349)
T cd06454 48 HEELEEELAEFHGK--------EAALV--FSSGYAANDGV--LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH- 114 (349)
T ss_pred HHHHHHHHHHHhCC--------CCEEE--eccHHHHHHHH--HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-
Confidence 46788888887632 22343 66667888877 6677789999999999999888888889999887764
Q ss_pred cCCCCCcCHHHHHHHHhcCC--CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHH
Q 023599 168 DPKTNGLDFQGMLQDLGAAP--SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPV 245 (280)
Q Consensus 168 ~~~~~~~d~~~l~~~~~~~~--~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 245 (280)
.|.+.+++.+.+.. .+.+++++++++||||...+ +++|+++|+++|+++|+|++|........... .
T Consensus 115 ------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~--~ 183 (349)
T cd06454 115 ------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRG--V 183 (349)
T ss_pred ------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCC--h
Confidence 47788888887531 34568888999999998765 67778999999999999999975433211111 1
Q ss_pred HHhh-hcCCeEEEEecccccccccccccceEEEE
Q 023599 246 RMFV-ADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 246 ~~~~-~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.... ......++++|+||.++.+| ||++..
T Consensus 184 ~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~ 214 (349)
T cd06454 184 EEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS 214 (349)
T ss_pred hhhccccccCcEEEeechhhhcccC---CEEECC
Confidence 1111 22346899999999998654 988753
No 134
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.83 E-value=2.6e-19 Score=161.24 Aligned_cols=167 Identities=16% Similarity=0.085 Sum_probs=127.1
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY 167 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~ 167 (280)
...+++.+|+++.. +.+.+ ++|+++++..+ +.+++.+||+|++..+.|......++..|++++.++..
T Consensus 53 ~~~~~e~lA~~~g~--------~~~~i--~~g~~~a~~~~--~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 53 IHDFLEDLAEFLGM--------DEARV--THGAREGKFAV--MHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred HHHHHHHHHHHhCC--------CceEE--ECChHHHHHHH--HHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 46788889888532 44556 89999999999 77888999999998888654446678899999999973
Q ss_pred cCCCCCcCHHHHHHHHhcCC----CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChh
Q 023599 168 DPKTNGLDFQGMLQDLGAAP----SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 168 ~~~~~~~d~~~l~~~~~~~~----~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 243 (280)
.+.++.+|++.+++++.+.+ .+..+|++++|+||||...+ +++|+++|+++|+++|+|++|....... +
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~~--~-- 193 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMPV--S-- 193 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcCC--C--
Confidence 23357899999999986421 23458888999999998765 5567889999999999999998753321 1
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
....+.+ ++++|+||.++ +|.|+||+++..
T Consensus 194 ----~~~~~~d-i~v~s~sK~~~-~~g~~G~l~~~~ 223 (370)
T TIGR02539 194 ----AKEIGAD-FIVGSGHKSMA-ASGPCGVLGMSE 223 (370)
T ss_pred ----HHHcCCC-EEEeeCccccc-CCCCEEEEEECH
Confidence 1122233 56799999998 678999998753
No 135
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.83 E-value=4.3e-19 Score=161.72 Aligned_cols=166 Identities=13% Similarity=0.084 Sum_probs=125.5
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHH--HhhcCCCEEEEeCCCCCC----hHHHHHHcCCee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFL--AKHYYQHTVYLSQPTYGN----HPNFFAAAGLAM 161 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~--~~~~~Gd~Vli~~P~y~~----~~~~~~~~G~~~ 161 (280)
.+++|+++++++... ++++|++ |+|+++++.++++.+ ..+.+||+|+++++.|+. +...++..|+++
T Consensus 69 ~~~~r~~la~~~~~~-----~~~~v~~--t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 141 (406)
T PRK09295 69 MENVRKQAALFINAR-----SAEELVF--VRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAEL 141 (406)
T ss_pred HHHHHHHHHHHcCcC-----CCCeEEE--eCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 567889999987432 2478888 999999999883222 145799999999987754 455566789999
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
+.++. + .++.+|++.+++++.++++ ++++++|+||||.+++ +++|+++|+++|+++++|++|.......
T Consensus 142 ~~v~~-~-~~~~~d~~~l~~~i~~~t~---lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~~~--- 210 (406)
T PRK09295 142 RVIPL-N-PDGTLQLETLPALFDERTR---LLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHHPV--- 210 (406)
T ss_pred EEEec-C-CCCCCCHHHHHHhcCCCcE---EEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCcccc---
Confidence 99998 3 3466899999999876544 8899999999999987 4667888999999999999997654321
Q ss_pred hhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.+.+.+. -+++.|++|.+|.+| +||+++..
T Consensus 211 -----~~~~~~~-D~~~~s~~K~~gp~G--~G~l~~~~ 240 (406)
T PRK09295 211 -----DVQALDC-DFYVFSGHKLYGPTG--IGILYVKE 240 (406)
T ss_pred -----CchhcCC-CEEEeehhhccCCCC--cEEEEEch
Confidence 1111222 367899999888665 79988753
No 136
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=2e-19 Score=162.91 Aligned_cols=160 Identities=14% Similarity=0.129 Sum_probs=122.7
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH----HHHcC
Q 023599 83 LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF----FAAAG 158 (280)
Q Consensus 83 ~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~----~~~~G 158 (280)
.+.+....|++.++++... ++.++ +++|++|+.++ +.+++.+||+|+++.|+|...... +...|
T Consensus 61 ~~~p~~~~le~~lA~l~g~--------~~~i~--~ssG~~Ai~~~--l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~G 128 (398)
T PRK08249 61 NTNPTVQAFEEKVRILEGA--------EAATA--FSTGMAAISNT--LYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMG 128 (398)
T ss_pred CCChHHHHHHHHHHHHhCC--------CeEEE--eCChHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCC
Confidence 4455567899999998532 33444 88889999999 777889999999999999875443 44678
Q ss_pred CeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 159 LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 159 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
+++..++. .|++.++++++++++ +|++++|+||||.+++ +++|+++|+++++++|+|++|.......
T Consensus 129 i~v~~vd~-------~d~e~l~~~i~~~tk---lV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~ 195 (398)
T PRK08249 129 VDVTLCET-------GDHEQIEAEIAKGCD---LLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN 195 (398)
T ss_pred eEEEEcCC-------CCHHHHHHhcCCCCe---EEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC
Confidence 88776653 589999999976554 8888999999999997 5567888999999999999998665421
Q ss_pred CCChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
+ . ..+.. ++++|+||.++.+|.++|++++
T Consensus 196 --~---l----~~~~D-ivv~S~sK~l~g~~~~~gG~vv 224 (398)
T PRK08249 196 --P---L----ALGAD-LVIHSATKFLSGHADALGGVVC 224 (398)
T ss_pred --c---h----hhCCC-EEeccCceecCCCCCceEEEEE
Confidence 1 1 11222 6779999999888988865554
No 137
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=2.6e-19 Score=161.88 Aligned_cols=162 Identities=15% Similarity=0.096 Sum_probs=122.6
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH----Hc
Q 023599 82 YLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA----AA 157 (280)
Q Consensus 82 y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~----~~ 157 (280)
+.+......|+++++++.... .. ++ +++|++|+.++ +.+++.+||+|++++|+|......+. ..
T Consensus 57 r~~~p~~~~Le~~lA~~~g~~-------~~-i~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 124 (388)
T PRK07811 57 RTGNPTRTALEEQLAALEGGA-------YG-RA--FSSGMAATDCL--LRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRW 124 (388)
T ss_pred CCCCccHHHHHHHHHHHhCCC-------ce-EE--eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchHHHHHHHHhCcCC
Confidence 345567889999999996432 22 33 66779999999 78888999999999999986544433 35
Q ss_pred CCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 158 GLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 158 G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
|+++..++. .|++.+++++.++++ +|++++|+||||.+ .++++|+++|+++|+++|+|++|......
T Consensus 125 gi~~~~~d~-------~d~e~l~~~i~~~tk---lV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~ 191 (388)
T PRK07811 125 GVEYTPVDL-------SDLDAVRAAITPRTK---LIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQ 191 (388)
T ss_pred CeEEEEeCC-------CCHHHHHHhcCcCCe---EEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccC
Confidence 777666654 489999999876554 89999999999875 45778899999999999999999876442
Q ss_pred cCCChhHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 238 MDADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
. + + ..+.. +++.|+||.++.+| .+.||+++.
T Consensus 192 ~--p---~----~~gaD-ivv~S~sK~l~g~~~~~gG~vv~~ 223 (388)
T PRK07811 192 Q--P---L----ALGAD-VVVHSTTKYIGGHSDVVGGALVTN 223 (388)
T ss_pred C--c---h----hhCCc-EEEecCceeecCCCCcEEEEEEEC
Confidence 1 1 1 11222 88999999998765 567998864
No 138
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.82 E-value=3e-19 Score=162.23 Aligned_cols=159 Identities=16% Similarity=0.118 Sum_probs=121.5
Q ss_pred CCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHHHcCC
Q 023599 84 PITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFAAAGL 159 (280)
Q Consensus 84 ~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~~~G~ 159 (280)
+......|++.++++... +..++ +++|++|+.++ +.+++.+||+|+++.|.|..... .+...|+
T Consensus 63 ~~p~~~~le~~lA~l~g~--------~~~i~--~~sG~~Al~~~--l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~ 130 (403)
T PRK07503 63 SNPTLALLEQRMASLEGG--------EAAVA--LASGMGAITAT--LWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGV 130 (403)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHcCCCCEEEEccCccchHHHHHHHHHhhCCE
Confidence 444578899999998532 22344 77889999999 77778999999999999976433 3456898
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
+++.++. .|++.+++++.++++ +|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 131 ~v~~vd~-------~d~~~l~~~i~~~tk---lV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~~- 196 (403)
T PRK07503 131 TVRHVDL-------TDPAALKAAISDKTR---MVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQR- 196 (403)
T ss_pred EEEEeCC-------CCHHHHHHhcCccCc---EEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 8888876 268999998876554 8888999999998876 6777888999999999999998654321
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccc-cccceEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSV 277 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~ 277 (280)
+ + +.+. -+++.|+||.++.+| .|.||++.
T Consensus 197 -~------l-~~g~-Di~v~S~tK~l~g~gd~~gG~v~~ 226 (403)
T PRK07503 197 -P------L-ELGA-DLVVHSATKYLGGHGDITAGLVVG 226 (403)
T ss_pred -c------h-hhCC-CEEEccccccccCCCceeEEEEEc
Confidence 1 1 1222 388999999999776 67787763
No 139
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=3.2e-19 Score=161.01 Aligned_cols=164 Identities=16% Similarity=0.094 Sum_probs=123.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH---
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA--- 156 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~--- 156 (280)
.++.+......|++++|++... +++++ ++||++++.++ +.+++.+||+|++++|+|+.....+..
T Consensus 46 Y~R~~~pt~~~L~~~lA~l~g~--------~~~i~--~~sg~~Ai~~~--l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~ 113 (386)
T PRK08045 46 YSRRGNPTRDVVQRALAELEGG--------AGAVL--TNTGMSAIHLV--TTVFLKPGDLLVAPHDCYGGSYRLFDSLAK 113 (386)
T ss_pred eeCCCCccHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHh
Confidence 4445555678999999998531 34666 99999999999 778889999999999999865444332
Q ss_pred -cCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcc
Q 023599 157 -AGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV 235 (280)
Q Consensus 157 -~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~ 235 (280)
.|.++..++ ..|.+.+++++.++++ +|++++|+||||.+++ +++|.++|+++|+++|+|++|....
T Consensus 114 ~~gi~v~~vd-------~~d~e~l~~~l~~~tk---lV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~ 180 (386)
T PRK08045 114 RGCYRVLFVD-------QGDEQALRAALAEKPK---LVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPA 180 (386)
T ss_pred hCCeEEEEeC-------CCCHHHHHHhcccCCe---EEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccc
Confidence 333554443 2588999998876544 8888999999999997 4567888899999999999997764
Q ss_pred cCcCCChhHHHHhhhcCCeEEEEeccccccc-ccccccceEEEE
Q 023599 236 MNMDADALPVRMFVADGGECLVAQSYSKTMG-LYGERVGALSVV 278 (280)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~v~~ 278 (280)
... + + +.+.+ +++.|+||.++ ..+++.||+++.
T Consensus 181 ~~~--p------l-~~gaD-ivv~S~tK~l~G~~d~~~G~vi~~ 214 (386)
T PRK08045 181 LQN--P------L-ALGAD-LVLHSCTKYLNGHSDVVAGVVIAK 214 (386)
T ss_pred cCC--c------h-hhCCC-EEEeecceeccCCCCceeEEEEeC
Confidence 421 1 1 22234 78999999995 466889998763
No 140
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.82 E-value=7.6e-19 Score=159.51 Aligned_cols=214 Identities=12% Similarity=0.054 Sum_probs=138.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...|||..|.+.+.-++ ..+.+.++..+... .. . +....+..++++++++++....+ .+++++ ++|
T Consensus 37 dg~~~iD~~~g~~~~~lG~--~~p~v~~a~~~~~~-~~-~--~~~~~~~~~~~~~la~~l~~~~~----~~~v~~--~~g 104 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGH--CHPKLVEAIQEQAA-KL-I--HTSNLYYIEPQEELAEKLVELSG----MDKVFF--CNS 104 (396)
T ss_pred CCCEEEECCccHHhccCCC--CCHHHHHHHHHHHh-hc-c--ccccccCCHHHHHHHHHHHhhcC----CCEEEE--CCC
Confidence 4567899988875222232 22444444443331 11 0 11112235778888888765532 378888 999
Q ss_pred chhHHHHHHHHHHhhcCC-------CEEEEeCCCCCChHHHHHHcCCeee----EEEeecCCCC----CcCHHHHHHHHh
Q 023599 120 GSGSLRIGADFLAKHYYQ-------HTVYLSQPTYGNHPNFFAAAGLAMK----TYHYYDPKTN----GLDFQGMLQDLG 184 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~G-------d~Vli~~P~y~~~~~~~~~~G~~~~----~v~~~~~~~~----~~d~~~l~~~~~ 184 (280)
|++|+.++ +......+ ++|++.+++|.++.......+.... ..++ ..++ ..|++.+++.+.
T Consensus 105 g~eA~~~a--l~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~l~~~i~ 180 (396)
T PRK02627 105 GAEANEAA--IKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPL--VEGFIYVPFNDIEALKAAIT 180 (396)
T ss_pred cHHHHHHH--HHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCC--CCCceEeCCCCHHHHHHhcC
Confidence 99999999 44333222 6899999999877655544332211 1111 0111 128999999885
Q ss_pred cCCCCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccc
Q 023599 185 AAPSGAIVLLQASGHNPTG-IDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSK 263 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPTG-~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 263 (280)
++ ..++++++++|||| .+++.+.+++|.++|++|++++|+||+|.+|.+... ..+.... +...+ +.+|||
T Consensus 181 ~~---~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~--~~~~~~~-~~~pd---i~t~sK 251 (396)
T PRK02627 181 DK---TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK--LFAYQHY-GIEPD---IMTLAK 251 (396)
T ss_pred CC---eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc--eeeehhc-CCCCC---EEEEcc
Confidence 43 34777788899999 688999999999999999999999999998865421 1111111 22234 347999
Q ss_pred cccccccccceEEEEc
Q 023599 264 TMGLYGERVGALSVVR 279 (280)
Q Consensus 264 ~~~~~G~RvG~~v~~~ 279 (280)
.++ +|+|+||+++..
T Consensus 252 ~~~-~G~rig~~~~~~ 266 (396)
T PRK02627 252 GLG-GGVPIGAVLAKE 266 (396)
T ss_pred hhh-CCcccEEEEEcH
Confidence 999 999999999753
No 141
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=2.9e-19 Score=162.13 Aligned_cols=157 Identities=18% Similarity=0.169 Sum_probs=118.6
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC----hHHHHHHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN----HPNFFAAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~----~~~~~~~~G~~~~ 162 (280)
....|++.++++... ++.++ +++|++++.++ +.+++.+||+|+++.|.|.. +...++..|.+++
T Consensus 61 ~~~~Le~~lA~l~g~-------~~~v~---~~sG~~Ai~~~--l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~ 128 (405)
T PRK08776 61 TRDLLGEALAELEGG-------AGGVI---TATGMGAINLV--LNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALI 128 (405)
T ss_pred HHHHHHHHHHHHhCC-------CceEE---EcCHHHHHHHH--HHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEE
Confidence 456788888887432 14443 77779999999 77889999999999999987 3444555687887
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.++. .|++.+++++.++++ ++++++|+||||.+. ++++|+++|+++|++||+|++|......
T Consensus 129 ~v~~-------~d~~~l~~~i~~~tk---lV~l~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~~~~~----- 190 (405)
T PRK08776 129 TADL-------TDPRSLADALAQSPK---LVLIETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLSPALQ----- 190 (405)
T ss_pred EECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCcccccC-----
Confidence 7765 378999998876544 889999999999985 4778899999999999999999753321
Q ss_pred hHHHHhhhcCCeEEEEeccccccccc-ccccceEEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLY-GERVGALSVV 278 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~v~~ 278 (280)
.++ +.+.. +++.|.||.++.+ ++..||++..
T Consensus 191 ~pl----~~gaD-ivv~S~tK~l~g~~~~~~G~vv~~ 222 (405)
T PRK08776 191 KPL----EFGAD-LVLHSTTKYINGHSDVVGGAVVAR 222 (405)
T ss_pred Ccc----cccCC-EEEecCceeecCCCCceEEEEEeC
Confidence 111 12223 7889999999766 5788988764
No 142
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.81 E-value=6.6e-19 Score=159.35 Aligned_cols=160 Identities=14% Similarity=0.086 Sum_probs=122.2
Q ss_pred CCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHHHcCC
Q 023599 84 PITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFAAAGL 159 (280)
Q Consensus 84 ~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~~~G~ 159 (280)
+......|++.+|++... +..++ +++|++|+.++ +.+++.+||+|+++.|.|..... .+...|+
T Consensus 57 ~~p~~~~le~~lA~l~g~--------~~av~--~~sG~~Ai~~~--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~ 124 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLEGT--------EAAVA--TSSGMGAIAAT--LLTILKAGDHLISDECLYGCTFALLEHALTKFGI 124 (391)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCe
Confidence 334566799999999632 33444 88889999988 77788999999999998875433 3445788
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
++..+++ -|++.+++++.++++ +|++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 125 ~~~~vd~-------~d~e~l~~~i~~~tk---lV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~- 190 (391)
T TIGR01328 125 QVDFINM-------AIPEEVKAHIKDNTK---IVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN- 190 (391)
T ss_pred EEEEECC-------CCHHHHHHhhccCCe---EEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC-
Confidence 8888876 178899998876554 8889999999999886 5677888999999999999998654421
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+ + +.+.+ +++.|+||.++.+|.|+|.+++.
T Consensus 191 -~------~-~~g~D-ivv~S~sK~lgg~g~~~gG~v~~ 220 (391)
T TIGR01328 191 -P------V-ALGVD-VVVHSATKYIGGHGDVVAGLICG 220 (391)
T ss_pred -c------h-hcCCC-EEEccccccccCCCCceEEEEEc
Confidence 1 1 22233 77899999999999987555543
No 143
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.81 E-value=9.5e-19 Score=158.91 Aligned_cols=164 Identities=15% Similarity=0.054 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHH-HhhcCCCEEEEeCCCCCChH----HHHHHcCCeee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFL-AKHYYQHTVYLSQPTYGNHP----NFFAAAGLAMK 162 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~-~~~~~Gd~Vli~~P~y~~~~----~~~~~~G~~~~ 162 (280)
.+++|+.+++++... +++|++ +.|+++++..+...+ ..+.+||+|++.+|.|.... ..++..|++++
T Consensus 62 ~~~l~~~ia~~~~~~------~~~v~~--~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~ 133 (397)
T TIGR01976 62 VDDAREAVADLLNAD------PPEVVF--GANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVK 133 (397)
T ss_pred HHHHHHHHHHHcCCC------CCeEEE--eCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEE
Confidence 458889999886322 246776 999999988773222 23579999999999886543 44567899999
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.++. +++++.+|++.+++++.++++ ++++++|+||||.+++ +++|+++|+++|+++++|+++..-...
T Consensus 134 ~~~~-~~~~~~~~~~~l~~~i~~~~~---lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~----- 201 (397)
T TIGR01976 134 WARV-DEATGELHPDDLASLLSPRTR---LVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYAPHGL----- 201 (397)
T ss_pred EEec-cccCCCcCHHHHHHhcCCCce---EEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhccccC-----
Confidence 9998 444577899999999976544 8999999999999886 667788999999999999987422111
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+.+.+.+++ +.|++|.+| .|+||+++.
T Consensus 202 ---~~~~~~~~d~~-~~s~~K~~g---~~~G~l~~~ 230 (397)
T TIGR01976 202 ---IDVQATGADFL-TCSAYKFFG---PHMGILWGR 230 (397)
T ss_pred ---CCHHHcCCCEE-EEechhhcC---CceEEEEEc
Confidence 11222333444 589999874 579998875
No 144
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.81 E-value=1.7e-18 Score=156.22 Aligned_cols=217 Identities=13% Similarity=0.102 Sum_probs=134.9
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...|||..|...+.-|+ ..+...++..+.+..-......| +..-..+|.+.+++++ + .+++++ ++|
T Consensus 25 ~g~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~~~~--~~s 92 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGH-AHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS----G----ADRVFF--CNS 92 (379)
T ss_pred CCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCC
Confidence 3567899988754232332 22333344444443111111123 3333455666666653 2 157777 999
Q ss_pred chhHHHHHHHHHH-hhc----CCCEEEEeCCCCCChHHHHHHcCCeeeE----EEeecCCCCC--cCHHHHHHHHhcCCC
Q 023599 120 GSGSLRIGADFLA-KHY----YQHTVYLSQPTYGNHPNFFAAAGLAMKT----YHYYDPKTNG--LDFQGMLQDLGAAPS 188 (280)
Q Consensus 120 ~~~al~~~~~~~~-~~~----~Gd~Vli~~P~y~~~~~~~~~~G~~~~~----v~~~~~~~~~--~d~~~l~~~~~~~~~ 188 (280)
|++++.++.++.. ... +||+|++++|+|..+.......+..... .+...+..+. .|++.+++.+.++++
T Consensus 93 g~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 172 (379)
T TIGR00707 93 GAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETA 172 (379)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCee
Confidence 9999999844332 122 3799999999998887666655543321 2221111111 189999998865433
Q ss_pred CcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccc
Q 023599 189 GAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGL 267 (280)
Q Consensus 189 ~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 267 (280)
+++++.++||+|.. ++.+++++|.++|+++++++|+||+|.+|.+.. ...+.. ......+++ +|||.++
T Consensus 173 ---~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g--~~~~~~-~~~~~~d~~---t~sK~~~- 242 (379)
T TIGR00707 173 ---AVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG--KFFAYE-HYGIEPDII---TLAKGLG- 242 (379)
T ss_pred ---EEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc--hhhhHH-hcCCCCCEE---EEccccc-
Confidence 66666566677754 699999999999999999999999999886642 111111 112233443 6899999
Q ss_pred cccccceEEEE
Q 023599 268 YGERVGALSVV 278 (280)
Q Consensus 268 ~G~RvG~~v~~ 278 (280)
+|+|+||+++.
T Consensus 243 ~G~riG~~~~~ 253 (379)
T TIGR00707 243 GGVPIGATLAK 253 (379)
T ss_pred CCcccEEEEEc
Confidence 99999999874
No 145
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.81 E-value=2.3e-18 Score=156.80 Aligned_cols=166 Identities=17% Similarity=0.077 Sum_probs=125.8
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHH--hhcCCCEEEEeCCCCCCh----HHHHHHcCCe
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLA--KHYYQHTVYLSQPTYGNH----PNFFAAAGLA 160 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~--~~~~Gd~Vli~~P~y~~~----~~~~~~~G~~ 160 (280)
+.+++|+.+++++... .++++++ |+|+++++.+++..+. .+.+||+|+++++.|... ....+..|++
T Consensus 63 ~~~~~r~~ia~~~~~~-----~~~~v~~--~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 135 (403)
T TIGR01979 63 AYEAVREKVAKFINAA-----SDEEIVF--TRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGAT 135 (403)
T ss_pred HHHHHHHHHHHHhCcC-----CCCeEEE--eCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcE
Confidence 4668999999986432 1367888 9999999998832221 257899999999987653 3455578999
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
++.++. + +++.+|++.+++++.++++ ++++++++||||.+++ +++|.++|+++|+++++|++|.......
T Consensus 136 ~~~v~~-~-~~~~~~~~~l~~~i~~~~~---lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~~~-- 205 (403)
T TIGR01979 136 LKFIPL-D-DDGTLDLDDLEKLLTEKTK---LVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHMPV-- 205 (403)
T ss_pred EEEEec-C-CCCCCCHHHHHHHhccCCe---EEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCcccc--
Confidence 999998 3 4567899999999976544 8889999999999998 5667888999999999999986543221
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.+.+. ...+++.|++|.+|.+| +||+++.
T Consensus 206 ------~~~~~-~~d~~~~s~~K~~gp~G--~g~l~~~ 234 (403)
T TIGR01979 206 ------DVQAL-DCDFYVFSGHKMYGPTG--IGVLYGK 234 (403)
T ss_pred ------Ccccc-CCCEEEEecccccCCCC--ceEEEEc
Confidence 11112 23478899999988666 8888764
No 146
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.81 E-value=9.3e-19 Score=158.33 Aligned_cols=161 Identities=16% Similarity=0.132 Sum_probs=120.4
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH----cC
Q 023599 83 LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA----AG 158 (280)
Q Consensus 83 ~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~----~G 158 (280)
++......|++.++++... ++.++ +++|+.|+.++ +.+++.+||+|+++.|.|......+.. .|
T Consensus 58 ~~~pt~~~Le~~lA~l~G~--------~~al~--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g 125 (386)
T PRK06767 58 LGNPTVKLFEERMAVLEGG--------EEALA--FGSGMAAISAT--LIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM 125 (386)
T ss_pred CCCcchHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence 3555678999999999632 23344 77778899888 778889999999999999876655543 45
Q ss_pred CeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 159 LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 159 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
+++..++. .|++.+++++.++++ +|++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 126 i~~~~~~~-------~d~~~l~~~i~~~tk---lV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~ 192 (386)
T PRK06767 126 ITHSFCDM-------ETEADIENKIRPNTK---LIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQR 192 (386)
T ss_pred eEEEEeCC-------CCHHHHHHhhCcCce---EEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 54444433 478999998876554 8999999999999987 5667888899999999999997544321
Q ss_pred CCChhHHHHhhhcCCeEEEEeccccccccccccc-ceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERV-GALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~v~~ 278 (280)
+ + ..+.. +++.|+||.++.+|+|+ ||++..
T Consensus 193 --p------l-~~g~D-iv~~S~sK~l~g~g~~~gG~v~~~ 223 (386)
T PRK06767 193 --P------L-ELGCD-AVVHSATKYIGGHGDVVAGVTICK 223 (386)
T ss_pred --c------h-hcCCc-EEEecCcceecCCCCceeEEEEeC
Confidence 1 1 12222 67889999999899996 888764
No 147
>PRK05939 hypothetical protein; Provisional
Probab=99.81 E-value=1.3e-18 Score=157.49 Aligned_cols=157 Identities=19% Similarity=0.187 Sum_probs=123.5
Q ss_pred CCCH---HHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH---HHHHcCC
Q 023599 86 TGLP---EFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN---FFAAAGL 159 (280)
Q Consensus 86 ~G~~---~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~---~~~~~G~ 159 (280)
.|.+ .|++.++++..+ +..++ +++|++|+..+ +.+++.+||+|+++++.|+.+.. .+...|+
T Consensus 44 ~g~p~~~~lE~~la~leg~--------~~~v~--~ssG~~Ai~~~--l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~ 111 (397)
T PRK05939 44 QGTPTTAALEAKITKMEGG--------VGTVC--FATGMAAIAAV--FLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGV 111 (397)
T ss_pred CCCHHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHHcCCCCEEEECCCccccHHHHHHHHHhcCC
Confidence 3666 889999988432 22233 67779999999 77889999999999999987644 3556899
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcc-cCc
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV-MNM 238 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~-~~~ 238 (280)
+++.++. .|++.+++++.++++ +|++++|+||||.+ .++++|+++|+++|+++|+|++|.... +++
T Consensus 112 ~v~~v~~-------~d~e~l~~~l~~~tk---lV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~~~~~ 178 (397)
T PRK05939 112 EVTMVDA-------TDVQNVAAAIRPNTR---MVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPWLFRP 178 (397)
T ss_pred EEEEECC-------CCHHHHHHhCCCCCe---EEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCcccccccCc
Confidence 9988876 378999999876554 88889999999977 568899999999999999999985432 221
Q ss_pred CCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
. .. ..-+++.|+||.++.+|.++|++++.
T Consensus 179 -------~---~~-gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 179 -------K---DV-GASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred -------c---cc-CCEEEEecCeecccCCCCeEEEEEec
Confidence 1 11 24588999999999999999998774
No 148
>PLN02483 serine palmitoyltransferase
Probab=99.80 E-value=1e-18 Score=162.21 Aligned_cols=212 Identities=12% Similarity=0.031 Sum_probs=143.3
Q ss_pred CCCeeEeecceeecCCC-CccchHHHHHHHHHHhcc-CCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 41 SPMKLNLGFGVYRTEEG-KPLLLNAVRQAEQLLVND-LSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
..+.+||+.-+++-... .+.+.+.+.++.++.... ......|+...+..+|++++|+++.. ++.+++ ++
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-------~~ai~~--~~ 169 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-------PAAIVF--GM 169 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-------CcEEEE--CC
Confidence 35789999888754432 123345555555554311 12233477778899999999999742 255554 55
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhc-------C---CC
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGA-------A---PS 188 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~-------~---~~ 188 (280)
|..+...+ +.+++.+||.|++.+|+|..+...++..|++++.++. + |.+.+++.+++ + +.
T Consensus 170 -G~~an~~~--i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~-~------d~~~le~~l~~~i~~~~p~t~~p~ 239 (489)
T PLN02483 170 -GYATNSTI--IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQH-N------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
T ss_pred -HHHHHHHH--HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeC-C------CHHHHHHHHHhhhhccccccccCC
Confidence 45555555 6667899999999999999999999999999999986 1 45555555432 1 11
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC-CChhHHHHhhhcCCeEEEEecccccccc
Q 023599 189 GAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD-ADALPVRMFVADGGECLVAQSYSKTMGL 267 (280)
Q Consensus 189 ~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 267 (280)
+++++++....|++|.+. ++++|+++|++++++||+||+|........ ........+ +..+..|+++||||.||+
T Consensus 240 ~k~livve~v~s~~G~~~---~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v-~~~~~dI~~~SfSKs~g~ 315 (489)
T PLN02483 240 KKIIVIVEGIYSMEGELC---KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGV-DPADVDIMMGTFTKSFGS 315 (489)
T ss_pred ceEEEEECCCCCCCCccc---CHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCC-CcccCcEEEEecchhccc
Confidence 234666666669999776 467778999999999999999975443211 111111121 123467999999999998
Q ss_pred cccccceEEEE
Q 023599 268 YGERVGALSVV 278 (280)
Q Consensus 268 ~G~RvG~~v~~ 278 (280)
+| ||++..
T Consensus 316 ~G---G~i~~~ 323 (489)
T PLN02483 316 CG---GYIAGS 323 (489)
T ss_pred Cc---eEEEcC
Confidence 77 998864
No 149
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.80 E-value=1.7e-18 Score=155.53 Aligned_cols=163 Identities=14% Similarity=0.146 Sum_probs=123.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHH
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFA 155 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~ 155 (280)
+..++......|++.++++.... ..++ ++||++|+.++ + .++.+||+|++++|.|+.... .++
T Consensus 46 y~r~~~pt~~~le~~la~l~g~~--------~~~~--~~sG~~ai~~~--~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~ 112 (366)
T PRK08247 46 YSRTGNPTRGVLEQAIADLEGGD--------QGFA--CSSGMAAIQLV--M-SLFRSGDELIVSSDLYGGTYRLFEEHWK 112 (366)
T ss_pred ccCCCCchHHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH--H-HHhCCCCEEEEecCCcCcHHHHHHHHhh
Confidence 33445556788999999995332 2234 88899999876 4 567899999999999987543 445
Q ss_pred HcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcc
Q 023599 156 AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV 235 (280)
Q Consensus 156 ~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~ 235 (280)
..|++++.++. .|++.+++++.++++ +|++++|+|||| +..++++|+++|+++|+++|+|++|....
T Consensus 113 ~~G~~v~~vd~-------~d~~~l~~~i~~~tk---lv~le~P~NP~~---~~~dl~~I~~la~~~g~~lIvD~t~~~~~ 179 (366)
T PRK08247 113 KWNVRFVYVNT-------ASLKAIEQAITPNTK---AIFIETPTNPLM---QETDIAAIAKIAKKHGLLLIVDNTFYTPV 179 (366)
T ss_pred ccCceEEEECC-------CCHHHHHHhcccCce---EEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcccc
Confidence 68988888875 378999999876554 899999999985 67889999999999999999999995433
Q ss_pred cCcCCChhHHHHhhhcCCeEEEEeccccccccc-ccccceEEEE
Q 023599 236 MNMDADALPVRMFVADGGECLVAQSYSKTMGLY-GERVGALSVV 278 (280)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~v~~ 278 (280)
... + + + ....|+++|+||.++.+ +++.||++..
T Consensus 180 ~~~--p------~-~-~g~di~i~S~sK~~~g~~d~~~G~iv~~ 213 (366)
T PRK08247 180 LQR--P------L-E-EGADIVIHSATKYLGGHNDVLAGLVVAK 213 (366)
T ss_pred ccC--c------h-h-cCCcEEEeecceeccCCCceeeeEEecC
Confidence 221 0 1 1 13458999999999743 5699998764
No 150
>PLN02822 serine palmitoyltransferase
Probab=99.80 E-value=1.2e-18 Score=161.57 Aligned_cols=208 Identities=10% Similarity=-0.033 Sum_probs=142.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCC-----CCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEE
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSA-----DKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVST 114 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~ 114 (280)
.+.+.+||+.+.+.+.. .+++..+++.+.+.+ -+. ...|.+..+..+|++++++++.. ++.+++
T Consensus 107 ~G~~~id~~s~~~lgl~---~~~~i~ea~~~al~~-~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-------~~~i~~ 175 (481)
T PLN02822 107 NGKDVVNFASANYLGLI---GNEKIKESCTSALEK-YGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-------PDSILY 175 (481)
T ss_pred CCceEEEeECCCcCCCC---CCHHHHHHHHHHHHH-hCCCCcccCccccCHHHHHHHHHHHHHHhCC-------CCEEEE
Confidence 45688999999874443 445555555555542 111 11356666789999999999742 356665
Q ss_pred eecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhc---C---CC
Q 023599 115 VQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGA---A---PS 188 (280)
Q Consensus 115 v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~---~---~~ 188 (280)
++|++ ++..+ +.+++++||.|++....+..+...++..|.+++.++.. |.+.++..+++ . ++
T Consensus 176 --s~G~~-a~~sa--i~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~ 243 (481)
T PLN02822 176 --SYGLS-TIFSV--IPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKK 243 (481)
T ss_pred --CCHHH-HHHHH--HHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccC
Confidence 77766 56666 67888999999988776666666777788888888762 33444444331 1 11
Q ss_pred C-cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc--CCeEEEEecccccc
Q 023599 189 G-AIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD--GGECLVAQSYSKTM 265 (280)
Q Consensus 189 ~-~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~ 265 (280)
+ .++++++.++|+||.+.+ +++|+++|++|++++|+||+|....++.. ... +....+. ....|+++||||.|
T Consensus 244 ~~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~-G~G-~~e~~~v~~~~~dii~~s~sKal 318 (481)
T PLN02822 244 KLRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKS-GRG-LSEHFGVPIEKIDIITAAMGHAL 318 (481)
T ss_pred CCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC-CCC-hHHHcCCCCCCCeEEEecchhhh
Confidence 2 258888899999999998 67789999999999999999997766421 110 1111111 23568899999999
Q ss_pred cccccccceEEEE
Q 023599 266 GLYGERVGALSVV 278 (280)
Q Consensus 266 ~~~G~RvG~~v~~ 278 (280)
|++| ||++..
T Consensus 319 g~~G---G~i~g~ 328 (481)
T PLN02822 319 ATEG---GFCTGS 328 (481)
T ss_pred hhCC---eEEEcC
Confidence 9999 998864
No 151
>PRK06460 hypothetical protein; Provisional
Probab=99.80 E-value=9e-19 Score=157.75 Aligned_cols=161 Identities=14% Similarity=0.081 Sum_probs=115.9
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCC----ChHHHHHHcC
Q 023599 83 LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYG----NHPNFFAAAG 158 (280)
Q Consensus 83 ~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~----~~~~~~~~~G 158 (280)
.......+|+++++++.... ..++ +++|++++..+ +.+++.+||+|+++.|.|. .+...++..|
T Consensus 42 ~~~p~~~~L~~~lA~l~g~~-------~~v~---~~sG~~ai~~~--l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G 109 (376)
T PRK06460 42 EANPTVLELTKKIVELENAE-------MGVA---FSSGMGAISTT--ALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWG 109 (376)
T ss_pred CCCccHHHHHHHHHHHhCCC-------cEEE---eCCHHHHHHHH--HHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhC
Confidence 34557789999999996332 3333 56668999988 7788899999999987664 3456677889
Q ss_pred CeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 159 LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 159 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
+++..++. + +.+.+++.+++++ ++|++++||||||.+++.+ +|+++|+++|+++|+|++|......
T Consensus 110 ~~v~~~~~-~------~~~~l~~~~~~~t---klV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~~- 175 (376)
T PRK06460 110 VNVDASNP-G------SDNIIEKAKSKRY---DVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPINQ- 175 (376)
T ss_pred cEEEEECC-C------CHHHHHHhcCCCc---eEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCccccC-
Confidence 99888775 2 2233444333333 4888999999999999876 5688889999999999999764321
Q ss_pred CCChhHHHHhhhcCCeEEEEeccccccccc-ccccceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLY-GERVGALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~v~~ 278 (280)
..+ .. ...+++.|+||.|+.+ |.|+||++..
T Consensus 176 -------~~l-~~-~~divv~S~sK~l~G~~~~~~G~~~~~ 207 (376)
T PRK06460 176 -------KPL-EL-GADIVVHSASKFLAGHNDVIAGLAAGY 207 (376)
T ss_pred -------Chh-hc-CCCEEEeecceeccCCCCceEEEEecC
Confidence 111 12 2458899999998623 3679998753
No 152
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=1.4e-18 Score=156.67 Aligned_cols=164 Identities=14% Similarity=0.073 Sum_probs=125.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH----H
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF----A 155 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~----~ 155 (280)
++..+......|++++|++.. .+++++ ++||++|+.++ +.+++.+||+|+++.|+|+.....+ .
T Consensus 47 Y~R~~npt~~~Le~~lA~leg--------~e~ivv--t~gg~~Ai~~~--l~all~~Gd~Il~~~~~y~~~~~~~~~~~~ 114 (388)
T PRK08861 47 YTRSGNPNRGLLEQTLSELES--------GKGAVV--TNCGTSALNLW--VSALLGPDDLIVAPHDCYGGTYRLFNTRAN 114 (388)
T ss_pred ccCCCCchHHHHHHHHHHHhC--------CCeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCchHHHHHHHHHHHh
Confidence 344455567889999999953 267777 99999999999 7788899999999999998644433 2
Q ss_pred HcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcc
Q 023599 156 AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV 235 (280)
Q Consensus 156 ~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~ 235 (280)
..|+++..++. .|++.+++++.++++ +|++++|+||||.+++. ++|.++|+++++++|+|++|....
T Consensus 115 ~~gi~v~~vd~-------~d~e~l~~~i~~~tk---lV~lesP~NPtG~v~dl---~~I~~la~~~gi~vIvDea~~~~~ 181 (388)
T PRK08861 115 KGDFKVQFVDQ-------SDAAALDAALAKKPK---LILLETPSNPLVRVVDI---AELCQKAKAVGALVAVDNTFLTPV 181 (388)
T ss_pred cCCeEEEEECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCccccc
Confidence 34667766653 478999998876554 89999999999999985 466888999999999999998765
Q ss_pred cCcCCChhHHHHhhhcCCeEEEEeccccccccc-ccccceEEEE
Q 023599 236 MNMDADALPVRMFVADGGECLVAQSYSKTMGLY-GERVGALSVV 278 (280)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~v~~ 278 (280)
+.. + . +.+.. +++.|++|.++-+ +++.|++++.
T Consensus 182 ~~~--p----l---~~GaD-ivv~S~tK~l~G~~d~~gG~i~~~ 215 (388)
T PRK08861 182 LQK--P----L---ELGAD-FVIHSTTKYINGHSDVIGGVLITK 215 (388)
T ss_pred cCC--C----c---ccCCC-EEEeecceeccCCCcceeEEEEec
Confidence 421 1 1 12233 6799999999754 4788988753
No 153
>PRK02948 cysteine desulfurase; Provisional
Probab=99.80 E-value=1.9e-18 Score=156.15 Aligned_cols=162 Identities=16% Similarity=0.137 Sum_probs=120.0
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhh----cCCCEEEEeCCCCCC---hHHHHHHcCCe
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKH----YYQHTVYLSQPTYGN---HPNFFAAAGLA 160 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~----~~Gd~Vli~~P~y~~---~~~~~~~~G~~ 160 (280)
.+++|+.+++++.. .+++|++ |+|+++++.++ +.+++ .+||+|++....|+. +...++..|++
T Consensus 45 ~~~~r~~la~~~g~------~~~~i~~--~~g~t~a~~~~--~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~ 114 (381)
T PRK02948 45 LQVCRKTFAEMIGG------EEQGIYF--TSGGTESNYLA--IQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYT 114 (381)
T ss_pred HHHHHHHHHHHhCC------CCCeEEE--eCcHHHHHHHH--HHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCE
Confidence 45678888888632 2478887 99999999988 55554 578999998866554 44456678999
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
++.+++ + +++.+|++.+++.+.+++ .++++++|+||||.+++. ++|.++|+++|+++++|+++ .+...+
T Consensus 115 v~~v~~-~-~~~~~d~~~l~~~l~~~~---~lv~~~~~~n~tG~~~~~---~~I~~l~~~~~~~vivD~~~-~~g~~~-- 183 (381)
T PRK02948 115 VTEIPV-D-KSGLIRLVDLERAITPDT---VLASIQHANSEIGTIQPI---AEIGALLKKYNVLFHSDCVQ-TFGKLP-- 183 (381)
T ss_pred EEEEee-C-CCCCCCHHHHHHhcCCCC---EEEEEECCcCCcEeehhH---HHHHHHHHHcCCEEEEEChh-hccccc--
Confidence 999998 3 346789999999886554 389999999999999874 56788999999999999654 333211
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+.+. ..-+++.|++|.+|.+| +|++++.
T Consensus 184 -----~~~~~~-~~d~~~~s~~K~~gp~G--~G~l~~~ 213 (381)
T PRK02948 184 -----IDVFEM-GIDSLSVSAHKIYGPKG--VGAVYIN 213 (381)
T ss_pred -----cCcccC-CCCEEEecHHhcCCCCc--EEEEEEc
Confidence 011112 24466899999999888 7888764
No 154
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.80 E-value=2e-18 Score=156.77 Aligned_cols=203 Identities=13% Similarity=0.126 Sum_probs=141.6
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCC-----CCCCHHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLP-----ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-----~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
.+++|+.|.+ +++.| +.+.++..+. . . ..+|.+ ..|.+++++++++++....+. ..+++.+ +
T Consensus 21 ~~~~l~~g~~----~~~~p-~~~~~~~~~~-~--~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~--~ 87 (398)
T cd00613 21 SMSFLGSGTY----KHNPP-AVIKRNILEN-E--F-YTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASL--Q 87 (398)
T ss_pred Cccccccccc----CCcCc-HHHHHHhccc-c--C-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--Cccceec--c
Confidence 4599999996 33333 3333333332 1 1 234555 689999999999997655432 2346665 5
Q ss_pred c-cchhHHHHHHHHHHhhcC--CCEEEEeCCCCCChHHHHHHcC----CeeeEEEeecCCCCCcCHHHHHHHHhcCCCCc
Q 023599 118 L-SGSGSLRIGADFLAKHYY--QHTVYLSQPTYGNHPNFFAAAG----LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGA 190 (280)
Q Consensus 118 ~-g~~~al~~~~~~~~~~~~--Gd~Vli~~P~y~~~~~~~~~~G----~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 190 (280)
. |++++..++ +...+.+ ||+|++++|.|+.+...+...| ++++.++. ++++.+|++.+++++.+++
T Consensus 88 ~~g~~~~~~~~--~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~t--- 160 (398)
T cd00613 88 DEATAAAEAAG--LAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS--DEGGTVDLEALKEEVSEEV--- 160 (398)
T ss_pred CchHHHHHHHH--HHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc--CCCCCcCHHHHHHhcCCCe---
Confidence 5 444454444 3444555 9999999999999988888777 89998987 2345789999999886553
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccccc--
Q 023599 191 IVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLY-- 268 (280)
Q Consensus 191 ~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-- 268 (280)
++|++++|+ |||.+. +.+++|+++|+++|+++|+|+++....... .. +....-+++.|++|.+ +|
T Consensus 161 ~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~~--~~-------~~~~~d~~~~s~~K~~-~p~g 227 (398)
T cd00613 161 AALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGLK--PP-------GEYGADIVVGNLQKTG-VPHG 227 (398)
T ss_pred EEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCCC--Ch-------HHcCCCEEEeeccccC-CCCC
Confidence 377777775 999883 446999999999999999999875433211 00 1113457899999998 66
Q ss_pred --ccccceEEEE
Q 023599 269 --GERVGALSVV 278 (280)
Q Consensus 269 --G~RvG~~v~~ 278 (280)
|+|+||+++.
T Consensus 228 ~Ggp~~g~l~~~ 239 (398)
T cd00613 228 GGGPGAGFFAVK 239 (398)
T ss_pred CCCCceeEEEEh
Confidence 8999999875
No 155
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.80 E-value=3.2e-18 Score=148.33 Aligned_cols=187 Identities=21% Similarity=0.259 Sum_probs=122.1
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh---h-cC----------CCEEEEe
Q 023599 79 DKEY-LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK---H-YY----------QHTVYLS 143 (280)
Q Consensus 79 ~~~y-~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~---~-~~----------Gd~Vli~ 143 (280)
..+| +...|++++|+-+++.+. +.++++++ ||+.++++.-+.+.. . .+ .-+.++|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~llg------v~~~~viv----~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELLG------VPPENVIV----GGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHHT------S-GGGEEE-----SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred ccCCCCccCChHHHHHHHHHHhC------CCHHHEEE----eccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 4679 889999999999999973 34588865 555566554222221 1 11 2479999
Q ss_pred CCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHH-HHhCC
Q 023599 144 QPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQL-MRLKR 222 (280)
Q Consensus 144 ~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~-~~~~~ 222 (280)
.|+|..|..+++.+|++.+.|||. ++ ++|+|.+++++.+.+..+.+++++..+||||.++|.+..++++++ +...+
T Consensus 131 vPGYDRHFai~E~~Giemi~VpM~-~d--GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~D 207 (425)
T PF12897_consen 131 VPGYDRHFAITEHFGIEMIPVPMT-ED--GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPD 207 (425)
T ss_dssp ES--HHHHHHHHHCT-EEEEEEEE-TT--EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT
T ss_pred CCCchHHHHHHHhhCcEEEecCCC-CC--CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcC
Confidence 999999999999999999999994 44 799999999998877778899999999999999999999999987 44589
Q ss_pred ceeEEcccCCCccc--CcCCCh-hHHH-Hhhh--cCCeEEEEecccccccccccccceEEEEc
Q 023599 223 LLPFFDCAYQGFVM--NMDADA-LPVR-MFVA--DGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 223 ~~ii~De~y~~~~~--~~~~~~-~~~~-~~~~--~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
..|+.|++|.--.. +..... ..+. .+.. ..++++.+.|+||.- .||-+|+++..+.
T Consensus 208 FRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~ 269 (425)
T PF12897_consen 208 FRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASE 269 (425)
T ss_dssp -EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-H
T ss_pred eEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCH
Confidence 99999999965544 322121 1222 2222 346999999999987 5999999988753
No 156
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=2.9e-18 Score=156.67 Aligned_cols=159 Identities=18% Similarity=0.180 Sum_probs=123.7
Q ss_pred CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChH----HHHHHcCCe
Q 023599 85 ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHP----NFFAAAGLA 160 (280)
Q Consensus 85 ~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~----~~~~~~G~~ 160 (280)
......|.+.++++... +..++ ++||++|+.++ +.+++.+||+|+++.+.|+... ..++..|++
T Consensus 63 ~p~~~~Le~~lA~leg~--------~~al~--~~sG~~Ai~~a--l~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 63 NPTTDVFEKRIAALEGG--------IGALA--VSSGQAAITYS--ILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred CchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence 33456788889988532 34455 99999999999 8888899999999999997643 345568999
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
++.++. .|++.+++++.++++ +|++++|+||||.+++. ++|+++|+++++++|+|++|..-..
T Consensus 131 v~~vd~-------~d~e~l~~ai~~~tk---lV~l~sp~NPtG~v~di---~~I~~la~~~gi~vIvD~t~a~~~~---- 193 (431)
T PRK08248 131 VKFVDP-------SDPENFEAAITDKTK---ALFAETIGNPKGDVLDI---EAVAAIAHEHGIPLIVDNTFASPYL---- 193 (431)
T ss_pred EEEECC-------CCHHHHHHhcCCCCe---EEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEeCCCCcccc----
Confidence 988876 378999999876544 78888999999999975 5778899999999999999863211
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
. ..+ +.+ .-+++.|++|.++.+|.++|++++.
T Consensus 194 -~---~pl-~~g-aDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 194 -L---RPI-EHG-ADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred -C---Chh-HcC-CCEEEEcCccccCCCCCceEEEEEe
Confidence 1 111 232 3367899999999999999998874
No 157
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.79 E-value=5.7e-18 Score=155.19 Aligned_cols=166 Identities=16% Similarity=0.066 Sum_probs=124.1
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHH--hhcCCCEEEEeCCCCCC----hHHHHHHcCCee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLA--KHYYQHTVYLSQPTYGN----HPNFFAAAGLAM 161 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~--~~~~Gd~Vli~~P~y~~----~~~~~~~~G~~~ 161 (280)
.+++|+++++++... .+++|++ |.|+++++..+.+.+. .+.+||+|+++++.|+. +...++..|+++
T Consensus 78 ~~~~r~~la~~~~~~-----~~~~v~~--t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 78 YELARKKVAAFINAS-----TSREIVF--TRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHcCCC-----CCCEEEE--eCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 468899999987432 1368888 9999999999833221 35789999999997764 445556789999
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
+.++. +. ++.+|++.+++.+.++++ ++++++++||||.+++. ++|+++|+++|+++++|++|..-...
T Consensus 151 ~~v~~-~~-~~~~~~~~l~~~i~~~t~---lv~i~~~~n~tG~~~~~---~~I~~l~~~~g~~vivD~a~~~g~~~---- 218 (424)
T PLN02855 151 KFVGL-TP-DEVLDVEQLKELLSEKTK---LVATHHVSNVLGSILPV---EDIVHWAHAVGAKVLVDACQSVPHMP---- 218 (424)
T ss_pred EEEec-CC-CCCcCHHHHHHHhccCce---EEEEeCccccccccCCH---HHHHHHHHHcCCEEEEEhhhhcCCcC----
Confidence 99998 33 345899999999976544 88999999999999985 56788899999999999998532211
Q ss_pred hhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
..+.+.+.+ +++.|++|.+|.+| +||+++..
T Consensus 219 ----~~~~~~~~d-~~~~s~~K~~gp~G--~G~l~~~~ 249 (424)
T PLN02855 219 ----VDVQTLGAD-FLVASSHKMCGPTG--IGFLWGKS 249 (424)
T ss_pred ----CCchhcCCC-EEEeecccccCCCc--cEEEEEch
Confidence 111122223 56999999887555 89998753
No 158
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.79 E-value=3.7e-18 Score=153.74 Aligned_cols=163 Identities=13% Similarity=0.089 Sum_probs=124.1
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhc---CCCEEEEeCCCCCCh----HHHHHHcCCe
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHY---YQHTVYLSQPTYGNH----PNFFAAAGLA 160 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~---~Gd~Vli~~P~y~~~----~~~~~~~G~~ 160 (280)
..++|+.+++++... +++++++ |+|+++++.++ +.++.. +||+|++++++|... ....+..|++
T Consensus 45 ~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~a~~~~--~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~ 115 (373)
T cd06453 45 YEAAREKVARFINAP-----SPDEIIF--TRNTTEAINLV--AYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAK 115 (373)
T ss_pred HHHHHHHHHHHhCCC-----CCCeEEE--eCCHHHHHHHH--HHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcE
Confidence 467889999887432 1367877 99999999999 667666 899999999999764 3344567999
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
++.++. + +++.+|++.+++.+.++++ ++++++++||||.+.+. ++|.++|++++++|++|++|.......
T Consensus 116 ~~~v~~-~-~~~~~d~~~l~~~l~~~~~---~v~~~~~~~~tG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~~-- 185 (373)
T cd06453 116 LKVVPV-D-DDGQLDLEALEKLLTERTK---LVAVTHVSNVLGTINPV---KEIGEIAHEAGVPVLVDGAQSAGHMPV-- 185 (373)
T ss_pred EEEeec-C-CCCCcCHHHHHHHhcCCce---EEEEeCcccccCCcCCH---HHHHHHHHHcCCEEEEEhhhhcCceee--
Confidence 999998 3 4567999999999976543 88899999999999875 567888999999999999986433211
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.+...+.. +++.|+.|.++. .++||+++.
T Consensus 186 ------~~~~~~~d-~~~~s~~K~~~~--~g~g~~~~~ 214 (373)
T cd06453 186 ------DVQDLGCD-FLAFSGHKMLGP--TGIGVLYGK 214 (373)
T ss_pred ------eccccCCC-EEEeccccccCC--CCcEEEEEc
Confidence 01111223 456788899984 678998875
No 159
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.79 E-value=5e-18 Score=151.18 Aligned_cols=160 Identities=16% Similarity=0.115 Sum_probs=116.0
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEe---CCCCCChHHHHHHcCCeeeEE
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLS---QPTYGNHPNFFAAAGLAMKTY 164 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~---~P~y~~~~~~~~~~G~~~~~v 164 (280)
..+|++.+|+++. .+++++++ ++||.+++..+ +.+++.+||+|+++ .|+|..|...++..|+++..+
T Consensus 56 ~~~Le~~lA~~~g------~~~e~ilv--~~gg~~a~~~~--~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~ 125 (346)
T TIGR03576 56 EEKVQELGREHLG------GPEEKILV--FNRTSSAILAT--ILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES 125 (346)
T ss_pred HHHHHHHHHHHcC------CCcceEEE--ECCHHHHHHHH--HHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEecc
Confidence 4556677777642 23588888 99999999999 88889999999975 468888888888889875322
Q ss_pred EeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhH
Q 023599 165 HYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALP 244 (280)
Q Consensus 165 ~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 244 (280)
.+++.++. . ++ ..++++ +++||+|.+++.+++++|+++|+++++++|+||+|..+..... ...+
T Consensus 126 ---------~~l~~l~~-~-~~---~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~-~~~~ 189 (346)
T TIGR03576 126 ---------DELSELKK-I-DG---TSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLY-GQPP 189 (346)
T ss_pred ---------CCHHHHhh-C-cC---ceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccC-CCCC
Confidence 13444332 1 22 235555 4579999999999999999999999999999999998764211 1111
Q ss_pred HHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 245 VRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 245 ~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.. ..+.+ ++++|||| +++|+|+||+++..
T Consensus 190 ~~---~~~~d-ivv~s~SK--alaG~r~G~v~~~~ 218 (346)
T TIGR03576 190 AL---DLGAD-LVVTSTDK--LMDGPRGGLLAGRK 218 (346)
T ss_pred HH---HcCCc-EEEeccch--hccccceEEEEeCH
Confidence 11 22234 56779999 57899999998753
No 160
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=4.5e-18 Score=155.27 Aligned_cols=159 Identities=17% Similarity=0.146 Sum_probs=122.3
Q ss_pred CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH----cCCe
Q 023599 85 ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA----AGLA 160 (280)
Q Consensus 85 ~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~----~G~~ 160 (280)
......|++.++++... +..++ +++|++|+.++ +.+++.+||+|+++.+.|......+.. .|++
T Consensus 57 ~pt~~~Le~~lA~l~g~--------~~~l~--~ssG~~Ai~~a--l~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~ 124 (425)
T PRK06084 57 NPTNDVLEQRVAALEGG--------VGALA--VASGMAAITYA--IQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIE 124 (425)
T ss_pred CchHHHHHHHHHHHhCC--------CceeE--ehhHHHHHHHH--HHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeE
Confidence 34456899999998532 33344 88999999999 788889999999999999866555543 4555
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
+.+++. .|++.+++++.++++ +|++++|+||||.+++ +++|+++|+++++++|+|++|......
T Consensus 125 v~~~d~-------~d~e~le~ai~~~tk---lV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~--- 188 (425)
T PRK06084 125 TRFAAH-------DDIAALEALIDERTK---AVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC--- 188 (425)
T ss_pred EEEECC-------CCHHHHHHHhccCCc---EEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 555543 489999999977654 8888999999999997 577788999999999999999754331
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+ +.+. -+++.|+||.++.+|.++|.+++.
T Consensus 189 -----~p~-~~ga-Divv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 189 -----RPF-EHGA-DIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred -----Chh-hcCC-CEEEECchhcccccccceeEEEEe
Confidence 111 2222 278999999999999999998875
No 161
>PRK07179 hypothetical protein; Provisional
Probab=99.79 E-value=1.1e-17 Score=152.45 Aligned_cols=209 Identities=16% Similarity=0.048 Sum_probs=141.3
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCC-CCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLS-ADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
+...++|+..+|++....|...+++.++.++...... ....+.......+|++.+++++.. +.+++ ++|
T Consensus 53 g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~--~~s 122 (407)
T PRK07179 53 GPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--------ESCLL--CQS 122 (407)
T ss_pred CCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--------CcEEE--ECC
Confidence 4567899888886665444444444443333210010 111122222356788999998621 44555 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGH 199 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~ 199 (280)
|++|+.++ +.++..+||.|++..+.+......++..|.+++.++. .|++.+++++++++ +.+|++++++
T Consensus 123 G~~An~~~--l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~--~~lV~v~~v~ 191 (407)
T PRK07179 123 GWAANVGL--LQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHG--PGIIVVDSVY 191 (407)
T ss_pred HHHHHHHH--HHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcC--CeEEEECCCC
Confidence 99999998 7778889999999988887777667777877665543 48999999987542 3488889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCe-EEEEecccccccccccccceEEEE
Q 023599 200 NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGE-CLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 200 NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
||||.+.+ +++|.++|+++|+++|+||+|.....+.. ....+..+ +...+ .+++.|+||.++ .|+||+++.
T Consensus 192 n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~-g~g~~~~~-~~~~~vdi~~~S~sK~~g---~~~G~l~~~ 263 (407)
T PRK07179 192 STTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQ-GAGLVAEL-GLTSRVHFITASLAKAFA---GRAGIITCP 263 (407)
T ss_pred CCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCC-CCchHHhc-CCCCCCCEEEeechHhhh---ccCeEEEeC
Confidence 99999998 46778899999999999999975443211 11111121 22223 378999999986 379998864
No 162
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.78 E-value=1.5e-17 Score=150.67 Aligned_cols=168 Identities=11% Similarity=0.017 Sum_probs=130.5
Q ss_pred CCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEE
Q 023599 86 TGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYH 165 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~ 165 (280)
....++|+.+|+++.. +++++ ++|+++++.++ +.+++.+||+|+++.++|......++..|++++.++
T Consensus 63 ~~~~~l~~~lA~~~g~--------~~~~~--~~g~t~a~~~a--l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~ 130 (387)
T PRK09331 63 PPIADFHEDLAEFLGM--------DEARV--THGAREGKFAV--MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVP 130 (387)
T ss_pred hHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEe
Confidence 3478999999999632 45666 99999999999 788889999999999988776667788999999998
Q ss_pred eecCCCCCcCHHHHHHHHhcC----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 166 YYDPKTNGLDFQGMLQDLGAA----PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 166 ~~~~~~~~~d~~~l~~~~~~~----~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
...++++.+|++.+++++.+. .++..+|++++|+||||...+ +++|+++|+++|+++++|++|..-.... +
T Consensus 131 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~~~--~ 205 (387)
T PRK09331 131 KTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRMPV--D 205 (387)
T ss_pred CccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCCcCC--C
Confidence 721345779999999998753 124568889999999997654 7778899999999999999997543221 1
Q ss_pred hhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.. ..+ .-+++.|++|+++ .+.|+||+++.
T Consensus 206 ---~~---~~g-~D~~~~s~~K~l~-~~~~~G~l~~~ 234 (387)
T PRK09331 206 ---GK---KLG-ADFIVGSGHKSMA-ASAPSGVLATT 234 (387)
T ss_pred ---HH---HcC-CCEEEeeCccccc-CCCCEEEEEEC
Confidence 01 122 2367899999998 56799998764
No 163
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=5.7e-18 Score=153.34 Aligned_cols=162 Identities=13% Similarity=0.112 Sum_probs=124.5
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHHHc
Q 023599 82 YLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFAAA 157 (280)
Q Consensus 82 y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~~~ 157 (280)
.++......|++.++++.. .+++++ ++||++|+.++ +.+++.+||+|++++|+|..+.. .+...
T Consensus 61 r~~~pt~~~Le~~lA~l~g--------~~~~l~--~~sgt~Ai~~~--l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 61 LHATPTSLALAQRLAEIEG--------GRHALL--QPSGLAAISLV--YFGLVKAGDDVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred CCCCHHHHHHHHHHHHHhC--------CCeEEE--eccHHHHHHHH--HHHHhCCCCEEEEecCCcccHHHHHHHHHHhc
Confidence 3344556788888888742 256777 99999999999 77889999999999999998764 45567
Q ss_pred CCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 158 GLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 158 G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
|+++..++. .+.+.++++++++++ +|++++|+|||| +..++++|+++|+++|+++|+|++|.....-
T Consensus 129 Gi~v~~vd~-------~~~~~l~~~i~~~tk---lV~le~p~Np~~---~~~di~~I~~ia~~~gi~livD~a~a~~~~~ 195 (394)
T PRK07050 129 GITVRFYDP-------LIGAGIADLIQPNTR---LIWLEAPGSVTM---EVPDVPAITAAARARGVVTAIDNTYSAGLAF 195 (394)
T ss_pred CeEEEEECC-------CCHHHHHHhcCCCCe---EEEEECCCCCCc---cHhhHHHHHHHHHHcCCEEEEECCccccccc
Confidence 988888764 145678888876654 889999999996 6778999999999999999999999765431
Q ss_pred cCCChhHHHHhhhcCCeEEEEecccccccc-cccccceEEEE
Q 023599 238 MDADALPVRMFVADGGECLVAQSYSKTMGL-YGERVGALSVV 278 (280)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RvG~~v~~ 278 (280)
..+ +.+ .-+++.|+||.++. .+.+.|++++.
T Consensus 196 --------~~l-~~G-aDi~v~S~tK~~~g~~~~~gG~v~~~ 227 (394)
T PRK07050 196 --------KPF-EHG-VDISVQALTKYQSGGSDVLMGATITA 227 (394)
T ss_pred --------CHH-HcC-CeEEEEECCceecCCCCeeEEEEEEC
Confidence 111 122 24889999999962 34568988764
No 164
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.78 E-value=5.5e-18 Score=151.71 Aligned_cols=164 Identities=11% Similarity=0.019 Sum_probs=121.5
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC--hHHHHHHcCCeeeEEE
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN--HPNFFAAAGLAMKTYH 165 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~--~~~~~~~~G~~~~~v~ 165 (280)
.+++++.+++++... .++.+++ +.|+++++.++ +.+++.+||+|++++++|.. +...++..|++++.++
T Consensus 34 ~~~~~~~la~~~g~~-----~~~~~~~--~~~~t~al~~~--~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 34 MDEILEGLRYVFQTE-----NGLTFLL--SGSGTGAMEAA--LSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred HHHHHHHHHHHhcCC-----CCCEEEE--ecCcHHHHHHH--HHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 457788888886331 1234555 88889999999 77888899999999987765 4567788999999999
Q ss_pred eecCCCCCcCHHHHHHHHhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhH
Q 023599 166 YYDPKTNGLDFQGMLQDLGA-APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALP 244 (280)
Q Consensus 166 ~~~~~~~~~d~~~l~~~~~~-~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 244 (280)
. ++ ++.+|++.+++.+.+ +++ ++++++|+||||.+++. ++|.++|+++|+++++|+++......
T Consensus 105 ~-~~-~~~~~~~~l~~~i~~~~~~---~v~i~~~~~~~G~~~~~---~~i~~~a~~~~~~li~D~~~~~g~~~------- 169 (356)
T cd06451 105 K-PW-GEAVSPEEIAEALEQHDIK---AVTLTHNETSTGVLNPL---EGIGALAKKHDALLIVDAVSSLGGEP------- 169 (356)
T ss_pred c-CC-CCCCCHHHHHHHHhccCCC---EEEEeccCCCcccccCH---HHHHHHHHhcCCEEEEeeehhccCcc-------
Confidence 8 33 467899999999976 443 78888999999999874 45688889999999999987521111
Q ss_pred HHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 245 VRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 245 ~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+...+.. +++.|.+|.++.| -++||+++.
T Consensus 170 -~~~~~~~~d-~~~~s~~K~l~~p-~g~G~l~~~ 200 (356)
T cd06451 170 -FRMDEWGVD-VAYTGSQKALGAP-PGLGPIAFS 200 (356)
T ss_pred -ccccccCcc-EEEecCchhccCC-CCcceeEEC
Confidence 111122234 4467889999854 479999875
No 165
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.78 E-value=4.9e-18 Score=153.29 Aligned_cols=159 Identities=14% Similarity=0.167 Sum_probs=121.8
Q ss_pred CCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCCh----HHHHHHcCC
Q 023599 84 PITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNH----PNFFAAAGL 159 (280)
Q Consensus 84 ~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~----~~~~~~~G~ 159 (280)
+..-...|++.++++... +.+++ +++|++|+.++ +.+++.+||+|+++.+.|+.. ...+...|+
T Consensus 52 ~~p~~~~le~~la~l~g~--------~~~~~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 52 ANPTVAAFEERIAALEGA--------ERAVA--TATGMSAIQAA--LMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence 344578899999998522 34555 99999999999 777889999999999988764 334566899
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
++..++. .|++.+++++.++++ +|++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 120 ~v~~v~~-------~d~~~l~~~i~~~tk---lV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~- 185 (380)
T TIGR01325 120 EVSFVDP-------TDLNAWEAAVKPNTK---LVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ- 185 (380)
T ss_pred EEEEECC-------CCHHHHHHhcCCCce---EEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 9888876 268889888865543 8889999999998875 6777889999999999999998654421
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
+ . +.+. -+++.|+||.++.+|.++|.+++
T Consensus 186 -p----l---~~g~-Divv~S~sK~l~g~g~~~gG~vv 214 (380)
T TIGR01325 186 -P----L---KLGA-DVVVYSATKHIDGQGRVMGGVIA 214 (380)
T ss_pred -c----h---hhCC-CEEEeeccceecCCCCeEEEEEE
Confidence 1 1 2222 36688999999989999844443
No 166
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.78 E-value=3.8e-18 Score=154.87 Aligned_cols=160 Identities=12% Similarity=0.057 Sum_probs=124.0
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC----hHHHHHHcC
Q 023599 83 LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN----HPNFFAAAG 158 (280)
Q Consensus 83 ~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~----~~~~~~~~G 158 (280)
++......|++.+|++... ++.++ +++|+.|+..+ +.+++.+||+|+++...|++ +...++..|
T Consensus 67 ~~~p~~~~le~~lA~l~g~--------~~al~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G 134 (403)
T PRK07810 67 YGNPTVSMFEERLRLIEGA--------EACFA--TASGMSAVFTA--LGALLGAGDRLVAARSLFGSCFVVCNEILPRWG 134 (403)
T ss_pred CCCchHHHHHHHHHHHhCC--------CcEEE--ECChHHHHHHH--HHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence 3445578899999998532 34455 99999999998 77888999999999866644 345566789
Q ss_pred CeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 159 LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 159 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
++++.++. .|++.++++++++++ +|++++|+||||.+.+ +++|+++|+++++++|+|++|.......
T Consensus 135 ~~v~~vd~-------~d~~~l~~ai~~~tk---lV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~ 201 (403)
T PRK07810 135 VETVFVDG-------EDLSQWEEALSVPTQ---AVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR 201 (403)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCce---EEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 99988875 388999999877654 8889999999998885 6777889999999999999998665431
Q ss_pred CCChhHHHHhhhcCCeEEEEeccccccccccccc-ceEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERV-GALSV 277 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~v~ 277 (280)
+ . +.+. -+++.|++|.++.+|.++ ||++.
T Consensus 202 --~----~---~~ga-Divv~S~tK~l~g~g~~~gG~v~~ 231 (403)
T PRK07810 202 --G----L---PLGA-DVVVYSGTKHIDGQGRVLGGAILG 231 (403)
T ss_pred --h----h---hcCC-cEEEccCCceecCCcCceeEEEEe
Confidence 1 1 1222 367899999999899998 65554
No 167
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.78 E-value=7e-18 Score=153.46 Aligned_cols=176 Identities=9% Similarity=0.003 Sum_probs=124.6
Q ss_pred CCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCCh--HHHHHHcCCeeeE
Q 023599 86 TGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNH--PNFFAAAGLAMKT 163 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~--~~~~~~~G~~~~~ 163 (280)
.+..++++.+.+.+....+.. ..+.+++ ++++++++.++ +..++.+||+|++.+++|... ...++..|++++.
T Consensus 38 ~~~~~~~~~~~~~l~~~~g~~-~~~~vi~--~~~gt~a~~~a--~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~ 112 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFKTK-SGTPFIF--PTTGTGAWESA--LTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDV 112 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CCCEEEE--eCCcHHHHHHH--HHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEE
Confidence 345566666665543332221 1133444 88889999998 777788999999999988655 4667788999999
Q ss_pred EEeecCCCCCcCHHHHHHHHhcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 164 YHYYDPKTNGLDFQGMLQDLGAAP-SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 164 v~~~~~~~~~~d~~~l~~~~~~~~-~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
++. + .+..+|++.+++++.+.+ .+.+++++++++||||.+++.+++.++++ |+++|+++|+|+++.-...+
T Consensus 113 v~~-~-~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s~g~~~----- 184 (401)
T PLN02409 113 VES-P-WGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSSIGALD----- 184 (401)
T ss_pred EEC-C-CCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEcccccCCcc-----
Confidence 997 3 334589999999998632 13348888999999999999888877777 99999999999998632221
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
..+.+.+.. +++.|.+|.++.| .++||+++..
T Consensus 185 ---id~~~~~~D-~~~~s~~K~l~~P-~G~G~l~~~~ 216 (401)
T PLN02409 185 ---FRMDEWGVD-VALTGSQKALSLP-TGLGIVCASP 216 (401)
T ss_pred ---ccccccCcc-EEEEcCccccCcC-CCcceeEECH
Confidence 111122234 5566669999754 3799998753
No 168
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=6.4e-18 Score=152.59 Aligned_cols=159 Identities=14% Similarity=0.125 Sum_probs=120.9
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH---HcCC
Q 023599 83 LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA---AAGL 159 (280)
Q Consensus 83 ~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~---~~G~ 159 (280)
.......+|++.+++++.. +++++ ++||++|+..+ +.+++.+||+|+++.|.|..+...++ ..|+
T Consensus 50 ~~np~~~~lE~~lA~l~g~--------~~~l~--~~sG~~Ai~~~--l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~ 117 (385)
T PRK08574 50 EENPTLRPLEEALAKLEGG--------VDALA--FNSGMAAISTL--FFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGV 117 (385)
T ss_pred CCCccHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHhhccCc
Confidence 3445678999999999631 45565 89999999999 77889999999999999998877664 3466
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGA-APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
++..++ +|.+.+++++++ +++ +|++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 118 ~v~~~~--------~d~~~l~~~i~~~~tk---lV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~ 183 (385)
T PRK08574 118 KVVLAY--------PSTEDIIEAIKEGRTK---LVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLYR 183 (385)
T ss_pred EEEEEC--------CCHHHHHHhcCccCce---EEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 665542 367889998876 443 7888999999999997 5577899999999999999985433210
Q ss_pred CCChhHHHHhhhcCCeEEEEeccccccccccccc-ceEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERV-GALSV 277 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~v~ 277 (280)
+ + ..+ .-+++.|+||.++.+|-++ |++++
T Consensus 184 --~------l-~~G-aDivv~S~sK~l~g~~d~~gG~vi~ 213 (385)
T PRK08574 184 --P------L-RHG-ADFVVHSLTKYIAGHNDVVGGVAVA 213 (385)
T ss_pred --h------h-hhC-CcEEEeeCceeecCCCCceeEEEEE
Confidence 1 1 122 3478999999998788775 66665
No 169
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.78 E-value=4.2e-18 Score=154.97 Aligned_cols=207 Identities=17% Similarity=0.156 Sum_probs=135.8
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccC-----CCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEee
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDL-----SADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQ 116 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~ 116 (280)
.+.++|..|. + ...+.+.+++....... .....|....+.+.+++...+++....+. ...++.
T Consensus 19 ~~~~~~~~~~----~---~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~--- 86 (402)
T cd00378 19 RETLELIASE----N---FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQ--- 86 (402)
T ss_pred HhCeeeeccC----C---cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--Cceeee---
Confidence 4679998776 3 23445555443321101 11233555666677777654443221111 123343
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH-----HHHcCCeeeEEEeecC-CCCCcCHHHHHHHHhc-CCCC
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF-----FAAAGLAMKTYHYYDP-KTNGLDFQGMLQDLGA-APSG 189 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~-----~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~~~~-~~~~ 189 (280)
++||++|+.++ +.+++.+||+|++++|+|+.+... ++..|.++..+++..+ +++.+|++.+++.+.+ +++
T Consensus 87 ~~sgt~a~~~~--l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~- 163 (402)
T cd00378 87 PHSGSQANLAV--YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPK- 163 (402)
T ss_pred cCCcHHHHHHH--HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCC-
Confidence 44678999988 778889999999999999876443 5567887777776222 2688999999999864 333
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccC-CCcccCcCCChhHHHHhhhcCCeEEEEeccccccccc
Q 023599 190 AIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAY-QGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLY 268 (280)
Q Consensus 190 ~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 268 (280)
++++++|+||+. .++++|+++|+++|+++|+|++| .++.+.... ..+ + . +.+ ++++|+||.+ +
T Consensus 164 --~v~~~~~~~~~~-----~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~-~~~---~-~-~~d-v~~~s~sK~l--~ 227 (402)
T cd00378 164 --LIVAGASAYPRP-----IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVF-PNP---L-P-GAD-VVTTTTHKTL--R 227 (402)
T ss_pred --EEEecCcccCCC-----cCHHHHHHHHHhcCCEEEEEccchhhhhhcccC-CCc---c-c-CCc-EEEeccccCC--C
Confidence 777788888752 25788899999999999999995 555543211 111 1 1 234 6799999987 7
Q ss_pred ccccceEEEEc
Q 023599 269 GERVGALSVVR 279 (280)
Q Consensus 269 G~RvG~~v~~~ 279 (280)
|+|.||+++..
T Consensus 228 G~~gg~i~~~~ 238 (402)
T cd00378 228 GPRGGLILTRK 238 (402)
T ss_pred CCCceEEEecc
Confidence 99999998754
No 170
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.78 E-value=3.7e-18 Score=153.30 Aligned_cols=160 Identities=14% Similarity=0.025 Sum_probs=118.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH----H
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF----A 155 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~----~ 155 (280)
.++++......|+++++++. + ++.++ +++|++|+.++ +.+++.+||+|++++|+|..+...+ +
T Consensus 45 y~ry~~p~~~~Le~~lA~l~-~--------~~~v~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~ 111 (366)
T PRK07582 45 YGRASNPTWRALEAALGELE-G--------AEALV--FPSGMAAITAV--LRALLRPGDTVVVPADGYYQVRALAREYLA 111 (366)
T ss_pred eECCCCccHHHHHHHHHHHc-C--------CCEEE--ECCHHHHHHHH--HHHhcCCCCEEEEeCCCcHhHHHHHHHHHh
Confidence 44557778999999999986 1 34444 77778899998 7788899999999999998887654 3
Q ss_pred HcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcc
Q 023599 156 AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV 235 (280)
Q Consensus 156 ~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~ 235 (280)
..|++++.++. ++. .+ ...+++ .++++++|+||||.+. ++++|+++|+++|+++|+|++|....
T Consensus 112 ~~G~~v~~v~~-~~~-----~~----~~~~~t---~lV~le~p~NPtg~v~---di~~I~~~a~~~g~~lvVD~t~~~~~ 175 (366)
T PRK07582 112 PLGVTVREAPT-AGM-----AE----AALAGA---DLVLAETPSNPGLDVC---DLAALAAAAHAAGALLVVDNTTATPL 175 (366)
T ss_pred cCeEEEEEECC-CCh-----HH----HhccCc---eEEEEECCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCCCCcc
Confidence 57999999887 221 11 222333 3888899999999765 47888999999999999999996422
Q ss_pred cCcCCChhHHHHhhhcCCeEEEEeccccccc-ccccccceEEEE
Q 023599 236 MNMDADALPVRMFVADGGECLVAQSYSKTMG-LYGERVGALSVV 278 (280)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~v~~ 278 (280)
.. .+ + +.+.+ ++++|+||.++ .+|+|+||+++.
T Consensus 176 ~~--~p---~----~~g~D-ivv~S~sK~l~G~~g~~~G~v~~~ 209 (366)
T PRK07582 176 GQ--RP---L----ELGAD-LVVASDTKALTGHSDLLLGYVAGR 209 (366)
T ss_pred cc--Cc---h----hcCCc-EEEecccccccCCCCeeEEEEEcC
Confidence 11 11 1 12233 67899999984 467999999864
No 171
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.78 E-value=3.2e-17 Score=147.13 Aligned_cols=196 Identities=16% Similarity=0.113 Sum_probs=140.0
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccch
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS 121 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~ 121 (280)
..+||-+ |.. +.-|.+.+++.+.+++.+... .|. +.+++++++.+++....+. +++++ |+|++
T Consensus 8 ~~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~------~~~---~~~~~~~~~~~~~a~~~g~----~~~~~--~~g~t 70 (363)
T TIGR01437 8 KKVINAS-GKM-TILGVSTVSDEVADAQKRGAQ------NYF---EIKELVNKTGEYIANLLGV----EDAVI--VSSAS 70 (363)
T ss_pred ceEEECC-cEe-ecCCCCCCCHHHHHHHHHHHh------cCC---CHHHHHHHHHHHHHHhhCC----CeEEE--EcCHH
Confidence 4677775 554 444555566666665555441 132 3556666666665443332 56666 99999
Q ss_pred hHHHHHHHHHHhhcCCC---------------EEEEeCCCCCCh----HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHH
Q 023599 122 GSLRIGADFLAKHYYQH---------------TVYLSQPTYGNH----PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQD 182 (280)
Q Consensus 122 ~al~~~~~~~~~~~~Gd---------------~Vli~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 182 (280)
+|+.++ +.+++.+|| +|+++.|.|..| ...+...|+++++++. ++.+|++.++++
T Consensus 71 ~al~~a--l~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~a 144 (363)
T TIGR01437 71 AGIAQS--VAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAA 144 (363)
T ss_pred HHHHHH--HHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHh
Confidence 999999 888888998 999999888765 5667788999999986 235899999999
Q ss_pred HhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccc
Q 023599 183 LGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYS 262 (280)
Q Consensus 183 ~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 262 (280)
+.++++ .++++++|+||+|.+.+. ++|+++|++||+++|+|++|.. + . ......+. -+++.|++
T Consensus 145 i~~~t~--ai~~v~~~~~~~g~~~~~---~~i~~~a~~~gi~vivD~a~~~---~----~---~~~~~~g~-D~~~~S~~ 208 (363)
T TIGR01437 145 ITEKTA--AILYIKSHHCVQKSMLSV---EDAAQVAQEHNLPLIVDAAAEE---D----L---QKYYRLGA-DLVIYSGA 208 (363)
T ss_pred cChhce--EEEEEecCCCCcCCcCCH---HHHHHHHHHcCCeEEEECCCCC---c----h---HHHHHcCC-CEEEEeCC
Confidence 987754 355578899999998885 4579999999999999999961 1 1 11112223 35578899
Q ss_pred ccccccccccceEEEE
Q 023599 263 KTMGLYGERVGALSVV 278 (280)
Q Consensus 263 K~~~~~G~RvG~~v~~ 278 (280)
|.+ +|+|.||++..
T Consensus 209 K~l--~gp~~G~l~~~ 222 (363)
T TIGR01437 209 KAI--EGPTSGLVLGK 222 (363)
T ss_pred ccc--CCCceEEEEEc
Confidence 976 58899998753
No 172
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.77 E-value=6.5e-18 Score=152.77 Aligned_cols=198 Identities=12% Similarity=0.102 Sum_probs=134.9
Q ss_pred cCCCCccchHHHHHHHHHHhcc----CCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHH
Q 023599 54 TEEGKPLLLNAVRQAEQLLVND----LSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGAD 129 (280)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~ 129 (280)
|..+.+++++.+..+..+...+ +...+.| +..+.+.+++++++++...+. .++++|++ |+|+++++..+
T Consensus 4 d~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~~~~--~~~~~i~~--t~g~teal~~~-- 76 (382)
T TIGR03403 4 DNNATTMLDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKGINA--RDLDDIII--TSCATESNNWV-- 76 (382)
T ss_pred cCcCCCCCCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHHcCc--CCCCeEEE--eCCHHHHHHHH--
Confidence 3444445555555555444321 1112223 234667899999888643322 14588888 99999999998
Q ss_pred HHHh-----hcC-CCEEEEeCCCCCChHH---HHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCC
Q 023599 130 FLAK-----HYY-QHTVYLSQPTYGNHPN---FFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHN 200 (280)
Q Consensus 130 ~~~~-----~~~-Gd~Vli~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~N 200 (280)
+.++ ..+ |++|+++.+.|+.+.. .++..|++++.++. + +++.+|++.+++++.++++ ++++++|+|
T Consensus 77 ~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~-~-~~g~~d~~~l~~~i~~~t~---lv~~~~~~n 151 (382)
T TIGR03403 77 LKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPI-N-EQGTITAEQVREAITEKTA---LVSVMWANN 151 (382)
T ss_pred HHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEec-C-CCCCCCHHHHHHhcccCCe---EEEEEcccC
Confidence 5543 245 4789999866655543 34568999999998 3 3467899999999876544 888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
|||.+++. ++|.++|+++|+++++|+++...... ..+.+.+.+ +++.|+.|.+|.+|+ |++++
T Consensus 152 ~tG~~~~~---~~I~~la~~~g~~~ivD~a~~~g~~~--------~~~~~~~~D-~~~~s~~K~~gp~G~--g~l~v 214 (382)
T TIGR03403 152 ETGMIFPI---KEIGEICKERGVLFHTDAVQAIGKIP--------VDVQKAGVD-FLSFSAHKFHGPKGV--GGLYI 214 (382)
T ss_pred CCccccCH---HHHHHHHHHcCCEEEEechhhcCCCc--------cCccccCCC-EEEEcchhhCCCCce--EEEEE
Confidence 99999985 46788899999999999997633221 111122335 678999998887774 66654
No 173
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.77 E-value=1.7e-17 Score=149.37 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=114.2
Q ss_pred CCeEEeecccchhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPS 188 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~ 188 (280)
+++++ |+||++|+.++ +.++ +.|||+|++++|+|..+...+...|++++.+++ +++++.+|++.++++++++++
T Consensus 47 ~~~v~--~~sgt~aL~~~--l~al~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~-d~~~~~~d~~~le~~i~~~tk 121 (376)
T TIGR02379 47 KKALL--TPSCTAALEMA--ALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDI-RPDTMNIDETLIESAITHRTK 121 (376)
T ss_pred CeEEE--eCCHHHHHHHH--HHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec-CCCcCCCCHHHHHHhcCcCce
Confidence 66777 99999999998 6665 689999999999999998888999999999999 566688999999999876544
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcc-cCcCCChhHHHHhhhcCCeEEEEeccc----c
Q 023599 189 GAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV-MNMDADALPVRMFVADGGECLVAQSYS----K 263 (280)
Q Consensus 189 ~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~S----K 263 (280)
+|+ |+||||...+ +.+|.++|+++|++||+|++++.+. ++.. . + .....+++|| |
T Consensus 122 ---~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~~~~~-~------~----g~~~~~~~fSf~~~K 181 (376)
T TIGR02379 122 ---AIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMSTYKGR-A------L----GSIGHLGTFSFHETK 181 (376)
T ss_pred ---EEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCccCCc-c------c----CCCCCEEEEeCCCCC
Confidence 555 6789998775 5577899999999999999998775 4321 1 1 1122344555 9
Q ss_pred cccccccccceEEEE
Q 023599 264 TMGLYGERVGALSVV 278 (280)
Q Consensus 264 ~~~~~G~RvG~~v~~ 278 (280)
.+. +|.+.|++++.
T Consensus 182 ~l~-~g~~gG~v~~~ 195 (376)
T TIGR02379 182 NYT-SGGEGGALLIN 195 (376)
T ss_pred cCc-ccCCceEEEEC
Confidence 996 79899998875
No 174
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.77 E-value=1.4e-17 Score=152.00 Aligned_cols=206 Identities=12% Similarity=0.007 Sum_probs=130.9
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCC----CCC-CCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEee
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSA----DKE-YLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQ 116 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~ 116 (280)
.+.++|+..++ .++...+..++++.+.+.. -+. ... |.......+|++.+++++.. ++.+++
T Consensus 46 ~~~~~~~sn~y---l~l~~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-------~~~i~~-- 112 (410)
T PRK13392 46 RRVTIWCSNDY---LGMGQHPDVIGAMVDALDR-YGAGAGGTRNISGTSHPHVLLERELADLHGK-------ESALLF-- 112 (410)
T ss_pred ceEEEEECCCc---cCCCCCHHHHHHHHHHHHH-cCCCCchhhhcccChHHHHHHHHHHHHHhCC-------CCEEEE--
Confidence 45788888776 5544555555555555441 110 111 22222356899999998631 244553
Q ss_pred cccchhHHHHHHHHHHhh--cCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC-CCCcEEE
Q 023599 117 CLSGSGSLRIGADFLAKH--YYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA-PSGAIVL 193 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~--~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~~v 193 (280)
++ |++++..+ +..+. .+||.|++..+.|..+...++..|+++..++. .|.+.+++.+... +.+.++|
T Consensus 113 ~s-G~~a~~~~--i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~t~~v 182 (410)
T PRK13392 113 TS-GYVSNDAA--LSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH-------NDLADLEEQLASVDPDRPKLI 182 (410)
T ss_pred Cc-HHHHHHHH--HHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC-------CCHHHHHHHHHhccCCCCEEE
Confidence 55 46666666 44343 48898888776676666667778888766643 1455666666432 1244589
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeE-EEEeccccccccccccc
Q 023599 194 LQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGEC-LVAQSYSKTMGLYGERV 272 (280)
Q Consensus 194 ~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-i~~~S~SK~~~~~G~Rv 272 (280)
++++|+||||.+++ +++|.++|+++++++|+||+|....+..... .+....+..+++ ++++||||.||++|
T Consensus 183 ~i~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~--g~~~~~~~~~~~div~~tlsK~~g~~G--- 254 (410)
T PRK13392 183 AFESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGG--GIAERDGLMDRIDMIQGTLAKAFGCLG--- 254 (410)
T ss_pred EEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCC--chhhhccCCCCCcEEEEEChHhhhccc---
Confidence 99999999999987 6677888999999999999998544421111 111111222233 88999999999988
Q ss_pred ceEEEE
Q 023599 273 GALSVV 278 (280)
Q Consensus 273 G~~v~~ 278 (280)
||++..
T Consensus 255 G~~~~~ 260 (410)
T PRK13392 255 GYIAAS 260 (410)
T ss_pred chhhcC
Confidence 888653
No 175
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.77 E-value=9.3e-18 Score=151.03 Aligned_cols=160 Identities=18% Similarity=0.119 Sum_probs=124.6
Q ss_pred CCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH----HHHcCC
Q 023599 84 PITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF----FAAAGL 159 (280)
Q Consensus 84 ~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~----~~~~G~ 159 (280)
.......|++.++++... ++.++ +++|++|+..+ +.+++.+||+|+++.+.|...... ++..|+
T Consensus 38 ~~p~~~~le~~la~l~g~--------~~a~~--~~sG~~Ai~~~--l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 38 GNPTVDALEKKLAALEGG--------EAALA--FSSGMAAISTV--LLALLKAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred CChhHHHHHHHHHHHHCC--------CCEEE--EcCHHHHHHHH--HHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 455678899999998532 34455 88889999999 778889999999999999876544 346788
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
++..++. -|++.+++++.++++ +|++.+|+||||.+.+ +++|+++|+++|+++|+|++|....+..
T Consensus 106 ~~~~v~~-------~d~~~l~~~i~~~~~---~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~- 171 (369)
T cd00614 106 EVTFVDP-------DDPEALEAAIKPETK---LVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR- 171 (369)
T ss_pred EEEEeCC-------CCHHHHHHhcCCCCe---EEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC-
Confidence 8887775 258889998865444 8888999999999886 6677899999999999999997765421
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
.+ +.+ .-+++.|+||.++.+| .+.||++..
T Consensus 172 -------~~-~~g-~Divv~S~tK~l~g~~~~~gG~v~~~ 202 (369)
T cd00614 172 -------PL-ELG-ADIVVHSATKYIGGHSDVIAGVVVGS 202 (369)
T ss_pred -------hh-hhC-CcEEEeccceeccCCCCceEEEEEeC
Confidence 11 222 3477999999998776 889999874
No 176
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.77 E-value=3.8e-18 Score=148.95 Aligned_cols=172 Identities=16% Similarity=0.053 Sum_probs=128.3
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCee
Q 023599 82 YLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAM 161 (280)
Q Consensus 82 y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~ 161 (280)
+.|..-+.++++.+|+++.. ++..+ .|+|+++++.++ +.+++.+||+|+++.|+|......+...|+++
T Consensus 55 ~~~~g~i~~~~~~~A~~~ga--------~~~~~-~~~Gst~a~~~~--l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~ 123 (294)
T cd00615 55 LDPTGPIKEAQELAARAFGA--------KHTFF-LVNGTSSSNKAV--ILAVCGPGDKILIDRNCHKSVINGLVLSGAVP 123 (294)
T ss_pred CCCChHHHHHHHHHHHHhCC--------CCEEE-EcCcHHHHHHHH--HHHcCCCCCEEEEeCCchHHHHHHHHHCCCEE
Confidence 44554477899999998632 23332 289999999999 78889999999999999988888888899999
Q ss_pred eEEEeecCCC----CCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC-ccc
Q 023599 162 KTYHYYDPKT----NGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG-FVM 236 (280)
Q Consensus 162 ~~v~~~~~~~----~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~-~~~ 236 (280)
++++....++ ..+|++.+++++.+++ +.+++++++| ||||.+++ +++|+++|+++|+++|+|++|.. +.+
T Consensus 124 ~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~-~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~ 198 (294)
T cd00615 124 VYLKPERNPYYGIAGGIPPETFKKALIEHP-DAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRF 198 (294)
T ss_pred EEecCccCcccCcCCCCCHHHHHHHHHhCC-CceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhcc
Confidence 9887622222 3789999999997642 2447777888 79999986 67889999999999999999975 333
Q ss_pred CcCCChhHHHHhhhcCCeEEEEecccccccccccccceEE
Q 023599 237 NMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALS 276 (280)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v 276 (280)
.+..+. . .. .....+++.|++|++ +|+|.|+++
T Consensus 199 ~~~~~~---~-~~-~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 199 HPILPS---S-AA-MAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred CcccCc---c-hh-hcCCcEEEEchhccc--chHhHHHHH
Confidence 321111 1 11 224678899999985 788887654
No 177
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.77 E-value=1.3e-17 Score=150.10 Aligned_cols=167 Identities=14% Similarity=0.051 Sum_probs=123.4
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCCh--HHHHHHcCCeeeEE
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNH--PNFFAAAGLAMKTY 164 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~--~~~~~~~G~~~~~v 164 (280)
-..++|+.+++++.... ..+.+++ +.+|++++..+ +.++..+||+|+++.++|.+. ...++..|++++.+
T Consensus 38 ~~~~~~~~l~~l~~~~~----~~~~i~~--~~~gt~~l~~~--~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i 109 (368)
T PRK13479 38 LTASVRAKLVAIATGEE----GYTCVPL--QGSGTFSVEAA--IGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVL 109 (368)
T ss_pred HHHHHHHHHHHHhCCCC----CceEEEE--cCCcHHHHHHH--HHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEE
Confidence 35678888888864321 1134555 99999999999 788888999999998888665 36678899999999
Q ss_pred EeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhH
Q 023599 165 HYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALP 244 (280)
Q Consensus 165 ~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 244 (280)
++ ++++.+|++.+++++.+++ +..++++++|+||||...+. ++|.++|+++++++|+|++ +.+... +
T Consensus 110 ~~--~~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~~---~~i~~l~~~~~~~livDa~-~~~g~~---~--- 176 (368)
T PRK13479 110 DT--GEDEPPDAAEVEAALAADP-RITHVALVHCETTTGILNPL---DEIAAVAKRHGKRLIVDAM-SSFGAI---P--- 176 (368)
T ss_pred EC--CCCCCCCHHHHHHHHHhCC-CCcEEEEEcccCccccccCH---HHHHHHHHHcCCEEEEEcc-cccCCc---c---
Confidence 98 3346789999999987653 23477889999999999874 5778889999999999954 444321 1
Q ss_pred HHHhhhcCCeEEEEecccccc-cccccccceEEEE
Q 023599 245 VRMFVADGGECLVAQSYSKTM-GLYGERVGALSVV 278 (280)
Q Consensus 245 ~~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~v~~ 278 (280)
..+.+.+.+ +++.|++|.+ |.+| +||+++.
T Consensus 177 -~~~~~~~~d-~~v~s~~K~l~g~~G--~G~l~~~ 207 (368)
T PRK13479 177 -IDIAELGID-ALISSANKCIEGVPG--FGFVIAR 207 (368)
T ss_pred -ccccccCce-EEEecCccccccCCC--ceEEEEC
Confidence 112222234 5567999965 6677 5999875
No 178
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.77 E-value=5.8e-18 Score=150.80 Aligned_cols=200 Identities=14% Similarity=0.033 Sum_probs=139.9
Q ss_pred chHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhc-----
Q 023599 61 LLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHY----- 135 (280)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~----- 135 (280)
+...+........+ .. ...|....+..++++++++++....+.+..++++++ |+||++++.++ +.....
T Consensus 11 ~~~~~~~~~~~~~n-~~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~--t~ggt~a~~~a--l~~~~~~~~~~ 84 (345)
T cd06450 11 PPALLLEMLTSAKN-AI-DFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVF--TSGGSESNLLA--LLAARDRARKR 84 (345)
T ss_pred HHHHHHHHHHHhcC-CC-CcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEE--eCChhHHHHHH--HHHHHHHhhhh
Confidence 33444444444431 22 344888889999999999887544333223456777 99999999988 544322
Q ss_pred -------C--CCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhc---CCCCcEEEEecCCCCCCC
Q 023599 136 -------Y--QHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGA---APSGAIVLLQASGHNPTG 203 (280)
Q Consensus 136 -------~--Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~~~~~v~~~~p~NPTG 203 (280)
+ ++.|++++++|..+...++..|.+++.+++ ++ ++.+|++.+++++.+ +..+..++++++|+||||
T Consensus 85 ~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG 162 (345)
T cd06450 85 LKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPV-DE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTG 162 (345)
T ss_pred hhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeee-CC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCC
Confidence 2 347888999999888888888999999998 33 347999999999976 111335788899999999
Q ss_pred CCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeE-EEEecccccccccccccceEE
Q 023599 204 IDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGEC-LVAQSYSKTMGLYGERVGALS 276 (280)
Q Consensus 204 ~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-i~~~S~SK~~~~~G~RvG~~v 276 (280)
.+. ++++|+++|+++|+++++|++|..+........ . . . ....++ .+..|++|.++ ++.|+||+.
T Consensus 163 ~~~---~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~-~-~-~~~~~~d~~~~s~~K~l~-~p~g~g~~~ 228 (345)
T cd06450 163 AID---PLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPR-H-L-D-FGIERVDSISVDPHKYGL-VPLGCSAVL 228 (345)
T ss_pred CCC---CHHHHHHHHHHhCCeEEEechhhHHHhhChhhH-H-H-h-cCccccCEEEEchhHhhC-CCcchHHHH
Confidence 874 477889999999999999999988875321111 0 0 1 111233 34679999765 778999864
No 179
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=1.1e-17 Score=152.23 Aligned_cols=212 Identities=14% Similarity=0.105 Sum_probs=132.2
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|...+.-|+ ..+...++..+.+.+.......|....+ .+|.+.+++++. .. .++++++ ++|
T Consensus 41 dg~~~lD~~s~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~~-~~----~~~~v~~--~~s 111 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGH-AHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELLG-AP----EGGRVFF--CNS 111 (398)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhCC-CC----CCCEEEE--eCc
Confidence 4567899988764222232 1233333333333311111223543322 456666666532 11 2367887 999
Q ss_pred chhHHHHHHHHHHhhcCC-CEEEEeCCCCCChHHHHHHc-CC------------eeeEEEeecCCCCCcCHHHHHHHHhc
Q 023599 120 GSGSLRIGADFLAKHYYQ-HTVYLSQPTYGNHPNFFAAA-GL------------AMKTYHYYDPKTNGLDFQGMLQDLGA 185 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~G-d~Vli~~P~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~~~d~~~l~~~~~~ 185 (280)
|++|+..+ +.....+| ++|+..+++|..+....... |. ++..+|. .|++.+++.+.+
T Consensus 112 gsea~~~a--l~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~ 182 (398)
T PRK03244 112 GAEANEAA--FKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD 182 (398)
T ss_pred hHHHHHHH--HHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcC
Confidence 99999999 44333455 57888888998775443322 21 1222221 378899988753
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHH-HHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 186 APSGAIVLLQASGHNPTGIDPTAQQ-WEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 186 ~~~~~~~v~~~~p~NPTG~~~~~~~-l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
+..+|+++.++||||.+++.++ +++|.++|++||+++|+||+|..|.... .... ....+...++ .+|||.
T Consensus 183 ---~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g--~~~~-~~~~~~~pDi---~t~sK~ 253 (398)
T PRK03244 183 ---DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG--AWFA-HQHDGVTPDV---VTLAKG 253 (398)
T ss_pred ---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc--hHHh-hhhhCCCCCE---EEEchh
Confidence 3347888889999999997766 9999999999999999999998765432 1111 1122223344 488999
Q ss_pred ccccccccceEEEEc
Q 023599 265 MGLYGERVGALSVVR 279 (280)
Q Consensus 265 ~~~~G~RvG~~v~~~ 279 (280)
++ +|+|+||+++..
T Consensus 254 l~-~G~~ig~~~~~~ 267 (398)
T PRK03244 254 LG-GGLPIGACLAFG 267 (398)
T ss_pred hh-CCcccEEEEEcH
Confidence 99 899999998753
No 180
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.77 E-value=3.5e-17 Score=147.51 Aligned_cols=166 Identities=15% Similarity=0.122 Sum_probs=123.7
Q ss_pred CCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHHHcCCee
Q 023599 86 TGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFAAAGLAM 161 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~~~G~~~ 161 (280)
.+..++|+.+++++... ..++|++ |+|+++++.++ +.+++.+||+|+++.+.|..+.. .++..|+++
T Consensus 44 ~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~al~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~ 114 (376)
T TIGR01977 44 REVEETRQLLAKLFNAP-----SSAHVVF--TNNATTALNIA--LKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEI 114 (376)
T ss_pred HHHHHHHHHHHHHhCcC-----CCCeEEE--eCCHHHHHHHH--HHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 55678999999987432 1257877 99999999999 77778899999999999877643 344569999
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
+.++. + +++.+|++.+++++.+++ .++++++|+||||.+++. ++|.++|+++|+++|+|+++.......+
T Consensus 115 ~~v~~-~-~~~~~d~~~l~~~~~~~~---~~v~~~~~~n~tG~~~~~---~~i~~l~~~~~~~livD~a~~~g~~~~~-- 184 (376)
T TIGR01977 115 TIVKC-D-NEGLISPERIKRAIKTNT---KLIVVSHASNVTGTILPI---EEIGELAQENGIFFILDAAQTAGVIPID-- 184 (376)
T ss_pred EEEec-C-CCCCcCHHHHHHhcCCCC---eEEEEECCCCCccccCCH---HHHHHHHHHcCCEEEEEhhhccCccCCC--
Confidence 99987 3 356789999999996544 388899999999999985 4668889999999999999965443211
Q ss_pred hhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+...+.. +++.|..|.++.|. .+|.+++.
T Consensus 185 ------~~~~~~D-~~~~s~~K~l~~p~-g~g~l~~~ 213 (376)
T TIGR01977 185 ------MTELAID-MLAFTGHKGLLGPQ-GTGGLYIR 213 (376)
T ss_pred ------chhcCCC-EEEecccccccCCC-CceEEEEc
Confidence 1111122 56788889876442 35666553
No 181
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.76 E-value=2.6e-17 Score=149.20 Aligned_cols=218 Identities=13% Similarity=0.047 Sum_probs=134.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|.....-|+ -.+..++++.+++. +. ...... ...+....+++.+..... .+++++ ++|
T Consensus 29 dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~--~~--~~~~~~-~~~~~~~~la~~l~~~~~----~~~v~~--~~s 96 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGH-AHPHLVEALKEQAE--KL--WHVSNL-YRIPEQERLAERLVENSF----ADKVFF--TNS 96 (389)
T ss_pred CCCEEEECCccHhhccCCC-CCHHHHHHHHHHHH--hc--Cccccc-cCChHHHHHHHHHHhhCC----CCEEEE--cCC
Confidence 4567899987643222343 23344444444443 11 001111 112233344444433221 267777 999
Q ss_pred chhHHHHHHHHHHh--hcCCC----EEEEeCCCCCChHHHHHHcCCeeeEEEeec--CCCC----CcCHHHHHHHHhcCC
Q 023599 120 GSGSLRIGADFLAK--HYYQH----TVYLSQPTYGNHPNFFAAAGLAMKTYHYYD--PKTN----GLDFQGMLQDLGAAP 187 (280)
Q Consensus 120 ~~~al~~~~~~~~~--~~~Gd----~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~--~~~~----~~d~~~l~~~~~~~~ 187 (280)
|++|++.+.++... ..+|| +|++.+++|.++.......+.......... ..++ ..|++.+++.+.++
T Consensus 97 GseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~- 175 (389)
T PRK01278 97 GAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPN- 175 (389)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCC-
Confidence 99999999433221 34666 899999999988766655544322221100 1111 15899999988653
Q ss_pred CCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 188 SGAIVLLQASGHNPTG-IDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 188 ~~~~~v~~~~p~NPTG-~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
.++|+++..+||+| .+++.+.+++|.++|++||+++|+||+|..+..... ..+ ....+.... +.+|||.++
T Consensus 176 --~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~-~~~~~~~pd---i~t~sK~l~ 247 (389)
T PRK01278 176 --TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK--LFA-HEWAGVTPD---IMAVAKGIG 247 (389)
T ss_pred --eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--cee-ecccCCCCC---EEEEehhcc
Confidence 34777777788888 789999999999999999999999999998765321 111 011111122 458999998
Q ss_pred ccccccceEEEEc
Q 023599 267 LYGERVGALSVVR 279 (280)
Q Consensus 267 ~~G~RvG~~v~~~ 279 (280)
+|+|+||+++..
T Consensus 248 -~G~~ig~~~~~~ 259 (389)
T PRK01278 248 -GGFPLGACLATE 259 (389)
T ss_pred -CCcceEEEEEcH
Confidence 999999998753
No 182
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.76 E-value=3e-17 Score=148.25 Aligned_cols=161 Identities=12% Similarity=0.026 Sum_probs=125.2
Q ss_pred CCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHHHHHcCCeeeEE
Q 023599 86 TGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTY 164 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v 164 (280)
....+|++++++++.. ++++. ++||++|+.++ +.++ +.+||+|++++|+|..+...+...|++++.+
T Consensus 33 ~~~~~le~~la~~~g~--------~~~v~--~~sgt~al~la--l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~v 100 (379)
T PRK11658 33 PKNQALEQAFCQLTGN--------QHAIA--VSSATAGMHIT--LMALGIGPGDEVITPSLTWVSTLNMIVLLGATPVMV 100 (379)
T ss_pred HhHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEEEECCCcHHHHHHHHHHcCCEEEEE
Confidence 3578999999999732 34455 89999999999 7777 6899999999999999988889999999999
Q ss_pred EeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCc-ccCcCCChh
Q 023599 165 HYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGF-VMNMDADAL 243 (280)
Q Consensus 165 ~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~-~~~~~~~~~ 243 (280)
++ +.+++.+|++.+++++.++++ +|+ |+||+|...+ +++|.++|+++|++||+|+++... .+.. .
T Consensus 101 d~-~~~~~~~d~~~l~~~i~~~tk---av~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~~~-~--- 166 (379)
T PRK11658 101 DV-DRDTLMVTPEAIEAAITPRTK---AII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYYKG-R--- 166 (379)
T ss_pred ec-CCCcCCcCHHHHHHhcccCCe---EEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeECC-e---
Confidence 98 566677999999999876544 555 6788998764 667889999999999999999743 3331 1
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.+...+ +.+.||+|...+++.+.|+++..
T Consensus 167 ---~~g~~g---~~~~Sf~~~K~l~~g~GG~v~~~ 195 (379)
T PRK11658 167 ---HIGARG---TAIFSFHAIKNITCAEGGLVVTD 195 (379)
T ss_pred ---ecCCCC---CEEEeCCCCCcCcccCceEEEEC
Confidence 111112 24677776666788899987753
No 183
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.76 E-value=3.9e-17 Score=130.03 Aligned_cols=167 Identities=20% Similarity=0.186 Sum_probs=124.3
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChH-HHHHHcCCeeeEEEe
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHP-NFFAAAGLAMKTYHY 166 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~-~~~~~~G~~~~~v~~ 166 (280)
..++++.+++++. ...+++.+ ++|+++|+.++ +..+..+|++|+++.+.|..+. ..++..|++++.++.
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~--~~~~t~a~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~ 71 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVF--VPSGTGANEAA--LLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPV 71 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEE--eCCcHHHHHHH--HHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEecc
Confidence 3578999999874 12367777 88999999999 7777778999999999998888 788889999999987
Q ss_pred ecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHH
Q 023599 167 YDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVR 246 (280)
Q Consensus 167 ~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 246 (280)
.+......+.+.+++... ..++.++++++++||+|...+. ++|.++|+++|+++|+|++|..+...... .
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~-----~ 141 (170)
T cd01494 72 DDAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG-----V 141 (170)
T ss_pred CCCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc-----c
Confidence 322222223334544332 2345689999999999998876 67788899999999999999988774211 1
Q ss_pred HhhhcCCeEEEEecccccccccccccceEEE
Q 023599 247 MFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 247 ~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
.... ....+++.|++|.++. .|+||+++
T Consensus 142 ~~~~-~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 142 LIPE-GGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred cccc-ccCCEEEEEcccccCC--CceEEEEe
Confidence 1111 2245778999999973 89999876
No 184
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.76 E-value=4.2e-17 Score=145.64 Aligned_cols=194 Identities=15% Similarity=0.053 Sum_probs=133.5
Q ss_pred CCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhc
Q 023599 56 EGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHY 135 (280)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~ 135 (280)
+++..+.+.+.++++... ......|. .-...+|+.+++++.... ....+++ +.||++++..+ +.+++.
T Consensus 5 p~p~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~la~~~~~~~----~~~~i~~--~~~gt~~l~~~--~~~~~~ 72 (355)
T TIGR03301 5 PGPLSTSATVRDAMLVDW--CHWDSEFN--DVTDQVRDRLLALAGGDD----NHTCVLL--QGSGTFAVEAT--IGSLVP 72 (355)
T ss_pred CCCCCCCHHHHHHhhhhc--cCCCHHHH--HHHHHHHHHHHHHhcCCC----CCcEEEE--eCCcHHHHHHH--HHhccC
Confidence 345566667766655422 11111232 235678899998864332 1124555 99999999999 777778
Q ss_pred CCCEEEEeCCCCCC--hHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHH
Q 023599 136 YQHTVYLSQPTYGN--HPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQ 213 (280)
Q Consensus 136 ~Gd~Vli~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~ 213 (280)
+||+|++.++++.+ +...++..|.+++.++. ++++.+|++.+++.+.+++ +..++++++++||||...+ +++
T Consensus 73 ~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~--~~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~~~~G~~~~---~~~ 146 (355)
T TIGR03301 73 RDGKLLVLINGAYGERLAKICEYLGIPHTDLNF--SEYEPPDLNRIEEALAADP-DITHVATVHHETTTGILNP---LEA 146 (355)
T ss_pred CCCeEEEECCCchhhHHHHHHHHcCCceEEEec--CCCCCCCHHHHHHHHHhCC-CceEEEEEecCCcccchhH---HHH
Confidence 88887766665533 45667789999999997 3456789999999997653 3457778889999999776 678
Q ss_pred HHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccc-cccccccceEEEE
Q 023599 214 IRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTM-GLYGERVGALSVV 278 (280)
Q Consensus 214 i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~v~~ 278 (280)
|+++|++|++++|+|+++...... ..+... +.-++++|++|.+ +++| +||+++.
T Consensus 147 i~~l~~~~~~~livD~~~s~g~~~--------~~~~~~-~~d~~~~s~~K~l~~~~G--~g~~~~~ 201 (355)
T TIGR03301 147 IAKVARSHGAVLIVDAMSSFGAIP--------IDIEEL-DVDALIASANKCLEGVPG--FGFVIAR 201 (355)
T ss_pred HHHHHHHcCCEEEEEeccccCCcc--------cchhhc-CccEEEecCCcccccCCc--eeEEEEC
Confidence 899999999999999866533211 111111 3347789999987 5555 6999875
No 185
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.75 E-value=5.6e-17 Score=147.99 Aligned_cols=222 Identities=13% Similarity=0.054 Sum_probs=137.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...|||..|.....-++ .++..++++.+.+. .. ..|....+..++...+++.+....+. ..+++++ ++|
T Consensus 34 dG~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~--~~--~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~--~~s 104 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGH-NHPEVVEALKEQLA--KL--THFSLGFFYNEPAVELAELLLALTPE--GLDKVFF--VNS 104 (413)
T ss_pred CCCEEEEcCccHHhhccCC-CCHHHHHHHHHHHH--hC--cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEE--cCc
Confidence 4568899987642111222 33344444444443 11 23333223444444444444333221 2478888 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcC-------------CeeeEEEeecC-----CCCCcCHHHHHH
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAG-------------LAMKTYHYYDP-----KTNGLDFQGMLQ 181 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G-------------~~~~~v~~~~~-----~~~~~d~~~l~~ 181 (280)
|++|+..+.+++....++++|++.+++|..+.......+ .+++.+|. ++ ..+..|++.+++
T Consensus 105 gsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~ 183 (413)
T cd00610 105 GTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPY-PYRYRPPAELADDLEALEE 183 (413)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCC-CccccchhhHHHHHHHHHH
Confidence 999999994333224578999999999988654443322 23455554 21 123448999999
Q ss_pred HHhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEec
Q 023599 182 DLGAAPSGAIVLLQASGHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQS 260 (280)
Q Consensus 182 ~~~~~~~~~~~v~~~~p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 260 (280)
.+.+...+..+++++..+|++|.++ +.+.+++|.++|++|++++|+||+|..+..... ... ....+...+ +.|
T Consensus 184 ~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~--~~~-~~~~~~~~d---~~t 257 (413)
T cd00610 184 ALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGK--MFA-FEHFGVEPD---IVT 257 (413)
T ss_pred HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--hhh-HhhcCCCCC---eEE
Confidence 9876433445666666667779876 677799999999999999999999998744211 111 111121223 458
Q ss_pred ccccccccccccceEEEE
Q 023599 261 YSKTMGLYGERVGALSVV 278 (280)
Q Consensus 261 ~SK~~~~~G~RvG~~v~~ 278 (280)
+||.++ .|+|+||++..
T Consensus 258 ~sK~l~-~g~~~g~~~~~ 274 (413)
T cd00610 258 LGKGLG-GGLPLGAVLGR 274 (413)
T ss_pred Eccccc-CccccEEEEEc
Confidence 999999 48999999864
No 186
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=2.3e-17 Score=150.00 Aligned_cols=152 Identities=15% Similarity=0.164 Sum_probs=119.8
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH----HHHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF----FAAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~----~~~~G~~~~ 162 (280)
....|.+.++++..+ +..+. +++|++|+.++ +++++.+||+|+++.++|.+.... +...|+++.
T Consensus 62 tv~~lE~~la~leg~--------~~av~--~~SG~aAi~~a--l~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~ 129 (432)
T PRK06702 62 TLAAFEQKLAELEGG--------VGAVA--TASGQAAIMLA--VLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVT 129 (432)
T ss_pred HHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEE
Confidence 467889999998533 23444 99999999999 888899999999999999876665 567899988
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
+++. .+|++.++++++++++ +|++.+|+|||+.+.+ +++|+++|+++|+++|+|++|..-..
T Consensus 130 ~vd~------~~d~~~l~~~I~~~Tk---~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~------ 191 (432)
T PRK06702 130 FFNP------NLTADEIVALANDKTK---LVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL------ 191 (432)
T ss_pred EECC------CCCHHHHHHhCCcCCe---EEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh------
Confidence 8865 3689999999987765 7778899999998887 77889999999999999999842111
Q ss_pred hHHHHhhhcCCeEEEEecccc-----ccccccccc
Q 023599 243 LPVRMFVADGGECLVAQSYSK-----TMGLYGERV 272 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK-----~~~~~G~Rv 272 (280)
....+.+.. |++.|+|| ...++|.++
T Consensus 192 ---~~pl~~GAD-Ivv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 192 ---CQAFEHGAN-IIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred ---CChhhcCCC-EEEEccccccCCCcceeceEEE
Confidence 111222222 77999999 777888887
No 187
>PRK14012 cysteine desulfurase; Provisional
Probab=99.75 E-value=6.9e-17 Score=147.18 Aligned_cols=163 Identities=13% Similarity=0.080 Sum_probs=121.9
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh----hcCCCEEEEeCCCCCChHHHHH---HcCCe
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK----HYYQHTVYLSQPTYGNHPNFFA---AAGLA 160 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~----~~~Gd~Vli~~P~y~~~~~~~~---~~G~~ 160 (280)
..++|+.+++++.. +++++++ ++|+++++.++ +.++ ..+||+|+++.+.|+.+...++ ..|++
T Consensus 51 ~~~~r~~ia~~~g~------~~~~v~~--~~g~t~al~~~--l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~ 120 (404)
T PRK14012 51 VDIARNQIADLIGA------DPREIVF--TSGATESDNLA--IKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE 120 (404)
T ss_pred HHHHHHHHHHHcCc------CcCeEEE--eCCHHHHHHHH--HHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCE
Confidence 56778889888632 2367877 99999999988 5443 3689999999999977655443 45999
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
++.++. + +++.+|++.+++++.++++ ++++++++||||.+.+ +++|.++|+++++++|+|+++..-....
T Consensus 121 ~~~v~~-~-~~g~~d~~~l~~~i~~~t~---lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~~~~-- 190 (404)
T PRK14012 121 VTYLDP-Q-SNGIIDLEKLEAAMRDDTI---LVSIMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSVGKVPI-- 190 (404)
T ss_pred EEEEcc-C-CCCcCCHHHHHHhcCCCCE---EEEEECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhcCCccc--
Confidence 999988 3 4567899999999976544 8989999999998886 5677899999999999999986432210
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.+...+.. +++.|+.|.+| |+ ++|++++..
T Consensus 191 ------~~~~~~~D-~~~~s~~K~~g-p~-g~G~l~~~~ 220 (404)
T PRK14012 191 ------DLSKLKVD-LMSFSAHKIYG-PK-GIGALYVRR 220 (404)
T ss_pred ------CcccCCCC-EEEEehhhccC-CC-ceEEEEEec
Confidence 01111223 44568899887 55 799988764
No 188
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=2.7e-17 Score=148.21 Aligned_cols=162 Identities=13% Similarity=0.102 Sum_probs=121.1
Q ss_pred CCCCC--CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH---
Q 023599 80 KEYLP--ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF--- 154 (280)
Q Consensus 80 ~~y~~--~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~--- 154 (280)
+.|.. ..+...|++++|++..+ +++++ ++||++|+..+ +.+++++||+|++++|.|.++...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~~--------~~~~~--~~sG~~Ai~~~--l~all~~GD~Vvv~~~~Y~~t~~l~~~~ 120 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEGG--------AGTAL--YPSGAAAISNA--LLSFLKAGDHLLMVDSCYEPTRDLCDKI 120 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHh
Confidence 34555 33456999999988421 45666 99999999999 7888999999999999998876544
Q ss_pred -HHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC
Q 023599 155 -AAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG 233 (280)
Q Consensus 155 -~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~ 233 (280)
...|+++..++. .+.+.+++++.++++ +|++++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 121 l~~~Gi~v~~v~~-------~~~e~l~~~l~~~Tk---lV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 121 LKGFGIETTYYDP-------MIGEGIRELIRPNTK---VLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhcceEEEEECC-------CCHHHHHHhcCcCce---EEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 457777776653 145778888876554 99999999999754 6789999999999999999999976
Q ss_pred cccCcCCChhHHHHhhhcCCeEEEEeccccccccc-ccccceEE
Q 023599 234 FVMNMDADALPVRMFVADGGECLVAQSYSKTMGLY-GERVGALS 276 (280)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~v 276 (280)
.... .+ .+.+.. +++.|.+|.++-+ ++..|+++
T Consensus 188 p~~~--~P-------l~~GaD-ivv~S~tK~l~Gh~d~~~G~~~ 221 (394)
T PRK09028 188 PINS--RP-------FEMGVD-ISIQAATKYIVGHSDVMLGTAT 221 (394)
T ss_pred cccC--Cc-------cccCce-EEEEeCCeEecCCCCEEEEEEE
Confidence 4321 01 122222 7799999999544 56677553
No 189
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.73 E-value=1.7e-16 Score=145.51 Aligned_cols=217 Identities=15% Similarity=0.089 Sum_probs=139.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+|+..|.....-|+ .++..++++.+++. .. ...+.+..+..+|++++++++.. .+++++ ++|
T Consensus 46 dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~--~~-~~~~~~~~~~~~lae~l~~~~~~-------~~~v~~--~~s 112 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGH-AHPRVVEAVKEALE--RG-TSYGAPTEAEILLAKEIISRVPS-------VEMVRF--VNS 112 (423)
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHH--hC-CcCCCCCHHHHHHHHHHHHhCCc-------ccEEEE--eCC
Confidence 4567899988864221222 23444555555554 22 22233566788999999998532 157777 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH---cCCeeeEEEeec-------CCCC---CcCHHHHHHHHhcC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA---AGLAMKTYHYYD-------PKTN---GLDFQGMLQDLGAA 186 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~---~G~~~~~v~~~~-------~~~~---~~d~~~l~~~~~~~ 186 (280)
|++|++.+.++.......++|+...++|.++...+.. .|......+... .... ..|++.+++.+.+.
T Consensus 113 GseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 192 (423)
T TIGR00713 113 GTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY 192 (423)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc
Confidence 9999999844433333558999999999887543332 111111111100 0000 02789999988754
Q ss_pred CCC-cEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 187 PSG-AIVLLQASGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 187 ~~~-~~~v~~~~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
..+ +.+++.+.|+| +|.+.+ .+.+++|.++|++|++++|+||+|..+..+.. .. ....+...+ +.+|||.
T Consensus 193 ~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~-~~---~~~~~~~pD---i~t~sK~ 264 (423)
T TIGR00713 193 GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALG-GA---QEYFGVEPD---LTTLGKI 264 (423)
T ss_pred CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcc-hh---HHHhCCCcc---hhhhhhh
Confidence 233 34555578999 798888 68899999999999999999999998865311 11 111222233 3379999
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
++ +|+|+||+++.
T Consensus 265 l~-~G~pig~v~~~ 277 (423)
T TIGR00713 265 IG-GGLPVGAFGGR 277 (423)
T ss_pred hc-CCCceeeeeEH
Confidence 99 99999999875
No 190
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.73 E-value=2e-16 Score=142.77 Aligned_cols=159 Identities=15% Similarity=0.100 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee
Q 023599 89 PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY 167 (280)
Q Consensus 89 ~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~ 167 (280)
..+++++.+++....+ .+++++ ++||++|+.++ +..+ +.+||+|+++.|+|..+...+...|++++.+++
T Consensus 30 ~~~~~~~e~~la~~~g----~~~~v~--~~sgt~al~~~--l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~- 100 (375)
T PRK11706 30 GGFTRRCQQWLEQRFG----SAKVLL--TPSCTAALEMA--ALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDI- 100 (375)
T ss_pred CHHHHHHHHHHHHHhC----CCeEEE--ECCHHHHHHHH--HHHhCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec-
Confidence 3455555554433222 267777 99999999988 5544 579999999999999999999999999999998
Q ss_pred cCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc-CcCCChhHHH
Q 023599 168 DPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM-NMDADALPVR 246 (280)
Q Consensus 168 ~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~ 246 (280)
+++++.+|++.+++++.++++ ++++ .|+||...+ +++|.++|+++|++||+|++|+.+.. +. .. +.
T Consensus 101 d~~~~~~d~~~le~~i~~~tk---~i~~---~~~~G~~~~---~~~i~~la~~~~i~vIeD~a~a~g~~~~~-~~---~g 167 (375)
T PRK11706 101 RPDTMNIDETLIEAAITPKTR---AIVP---VHYAGVACE---MDTIMALAKKHNLFVVEDAAQGVMSTYKG-RA---LG 167 (375)
T ss_pred CCCcCCcCHHHHHHhcCCCCe---EEEE---eCCCCCccC---HHHHHHHHHHcCCEEEEECccccccccCC-ee---ee
Confidence 566778999999999876543 5554 357997654 66788999999999999999988763 32 11 11
Q ss_pred HhhhcCCeEEEEeccc----ccccccccccceEEE
Q 023599 247 MFVADGGECLVAQSYS----KTMGLYGERVGALSV 277 (280)
Q Consensus 247 ~~~~~~~~~i~~~S~S----K~~~~~G~RvG~~v~ 277 (280)
.+ ..+++|| |.++ +|.+.++++.
T Consensus 168 ~~-------~~~~~~Sf~~~K~l~-~g~gG~~~~~ 194 (375)
T PRK11706 168 TI-------GHIGCFSFHETKNYT-AGEGGALLIN 194 (375)
T ss_pred cC-------cCEEEEeCCCCcccc-ccCCeEEEEC
Confidence 11 1233444 9997 6998777763
No 191
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.72 E-value=2.2e-16 Score=142.44 Aligned_cols=155 Identities=18% Similarity=0.171 Sum_probs=116.5
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH----HHHcCCeeeE
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF----FAAAGLAMKT 163 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~----~~~~G~~~~~ 163 (280)
...|++.+++++.. +++++ +++|+.++.++ +. ++.+||+|+++++.|..+... +...|++++.
T Consensus 49 ~~~le~~la~l~g~--------~~~l~--~~sG~~al~~~--l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 115 (378)
T TIGR01329 49 RTALESLLAKLDKA--------DRAFA--FSSGMAALDVI--TR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVH 115 (378)
T ss_pred HHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEE
Confidence 45777888877422 44455 77778898877 43 679999999999999877654 3457999998
Q ss_pred EEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChh
Q 023599 164 YHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 164 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 243 (280)
++. .|++.++++++++++ ++++++|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 116 vd~-------~d~~~le~~i~~~tk---lv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~~------ 176 (378)
T TIGR01329 116 VDT-------TDLDKVKAALGPKTK---LVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLLC------ 176 (378)
T ss_pred eCC-------CCHHHHHHhcCcCce---EEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 886 278999998875544 8999999999998885 778899999999999999998543221
Q ss_pred HHHHhhhcCCeEEEEeccccccccc-ccccceEEEE
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLY-GERVGALSVV 278 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~v~~ 278 (280)
..+ +.+. -+++.|++|.++-+ +++.|++++.
T Consensus 177 --~~l-~~g~-Di~v~S~tK~l~G~~~~~~G~v~~~ 208 (378)
T TIGR01329 177 --NPL-ELGA-DIVYHSATKFLAGHSDVMAGVLAVK 208 (378)
T ss_pred --Chh-hcCC-cEEEEecceeccCCccceeEEEEeC
Confidence 111 1222 27799999988643 5889998863
No 192
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=2.2e-16 Score=142.24 Aligned_cols=157 Identities=16% Similarity=0.127 Sum_probs=113.6
Q ss_pred CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHHHcCCe
Q 023599 85 ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFAAAGLA 160 (280)
Q Consensus 85 ~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~~~G~~ 160 (280)
......|++.++++... +..++ +++|++++.++ + .++.+||+|++++|.|+.... .+...|++
T Consensus 49 ~p~~~~Le~~lA~l~g~--------~~~~~--~~sG~aai~~~--~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~ 115 (377)
T PRK07671 49 NPTRAALEELIAVLEGG--------HAGFA--FGSGMAAITAV--M-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIE 115 (377)
T ss_pred ChHHHHHHHHHHHHhCC--------CceEE--eCCHHHHHHHH--H-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeE
Confidence 33467899999998532 22233 66667887765 3 567899999999999984433 33457888
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
++.++. .|++.++++++++++ +|++++|+||||.+. ++++|.++|+++|+++|+|++|....+..
T Consensus 116 v~~v~~-------~d~~~l~~ai~~~tk---lV~le~P~NPtg~~~---dl~~I~~la~~~g~~lvvD~a~~~~~~~~-- 180 (377)
T PRK07671 116 HTFVDT-------SNLEEVEEAIRPNTK---AIYVETPTNPLLKIT---DIKKISTIAKEKGLLTIVDNTFMTPYWQS-- 180 (377)
T ss_pred EEEECC-------CCHHHHHHhcCCCCe---EEEEECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCCccccCC--
Confidence 888865 378999999976654 889999999999876 46677888999999999999997644421
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccc-cccceEEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSV 277 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~ 277 (280)
+ . +.+. -+++.|+||.++.++ .-.|++++
T Consensus 181 p----~---~~g~-Divv~S~sK~l~G~~~~~~G~~v~ 210 (377)
T PRK07671 181 P----I---SLGA-DIVLHSATKYLGGHSDVVAGLVVV 210 (377)
T ss_pred h----h---hhCC-eEEEecCcccccCCccceeEEEEe
Confidence 1 1 2222 488999999997554 34555544
No 193
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.72 E-value=2.3e-16 Score=141.95 Aligned_cols=162 Identities=14% Similarity=0.084 Sum_probs=121.6
Q ss_pred CCCCCCCCC---HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH---
Q 023599 80 KEYLPITGL---PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF--- 153 (280)
Q Consensus 80 ~~y~~~~G~---~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~--- 153 (280)
+.|+. .|. ..|++.+|++.. .+++++ ++||++|+.++ +.+++.+||+|++++|.|......
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~g--------~~~~~~--~~sG~~Ai~~a--l~all~~GD~Vl~~~~~y~~t~~~~~~ 108 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELEG--------GAGCYL--YPSGLAAVTNS--ILAFVKAGDHVLMVDSAYEPTRYFCDI 108 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHhC--------CCcEEE--ECcHHHHHHHH--HHHhcCCCCEEEEcCCCcHHHHHHHHH
Confidence 33553 455 589999998852 156666 99999999999 888899999999999999876543
Q ss_pred -HHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCC
Q 023599 154 -FAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQ 232 (280)
Q Consensus 154 -~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~ 232 (280)
+...|+++..++. . +.+.++++++++++ +|++++|+||||. ..++++|+++|+++|+++|+|++|.
T Consensus 109 ~~~~~gi~v~~~d~--~-----~~e~l~~~i~~~tk---lV~lesp~Np~g~---~~dl~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 109 VLKRMGVDITYYDP--L-----IGEDIATLIQPNTK---VLFLEAPSSITFE---IQDIPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred HHHhcCcEEEEECC--C-----CHHHHHHhcCCCce---EEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCc
Confidence 3457877776653 1 23788888876554 8999999999975 5678999999999999999999997
Q ss_pred CcccCcCCChhHHHHhhhcCCeEEEEeccccccccc-ccccceEEE
Q 023599 233 GFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLY-GERVGALSV 277 (280)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~v~ 277 (280)
.-.... + .+.+.. ++++|++|.++-+ +...|+++.
T Consensus 176 ~g~~~~--p-------l~~gaD-ivv~S~tK~l~G~~d~~gG~v~~ 211 (377)
T TIGR01324 176 AGLLFK--P-------LEHGVD-ISIQAGTKYLVGHSDIMIGTVVA 211 (377)
T ss_pred cccccC--c-------cccCce-EEEecCceeccCCCCceEEEEEe
Confidence 644311 1 122233 6799999999754 467887764
No 194
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=2.2e-16 Score=142.17 Aligned_cols=135 Identities=13% Similarity=0.103 Sum_probs=106.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEE
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIV 192 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 192 (280)
+++|++|+.++ +++++.+||+|++++|.|+++.. .++..|+++..++. . +.+.++++++++++ +
T Consensus 85 ~sSG~aAi~~~--l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~--~-----~~e~l~~al~~~Tk---l 152 (395)
T PRK05967 85 VPSGLAAVTVP--FLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDP--E-----IGAGIAKLMRPNTK---V 152 (395)
T ss_pred ECcHHHHHHHH--HHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCC--C-----CHHHHHHhcCcCce---E
Confidence 77789999999 88889999999999999998875 44678988888764 1 35778998877655 9
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccc-cccc
Q 023599 193 LLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGL-YGER 271 (280)
Q Consensus 193 v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~R 271 (280)
|++++|+||++ ...++++|+++|+++|+++|+|++|....+- + ..+.+.. |++.|.+|.++- .++.
T Consensus 153 V~lesPsNP~l---~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~--------~-pl~~GaD-ivv~S~tKy~~Gh~d~~ 219 (395)
T PRK05967 153 VHTEAPGSNTF---EMQDIPAIAEAAHRHGAIVMMDNTWATPLYF--------R-PLDFGVD-ISIHAATKYPSGHSDIL 219 (395)
T ss_pred EEEECCCCCCC---cHHHHHHHHHHHHHhCCEEEEECCccCceec--------C-hhHcCCC-EEEEecccccCCCCCee
Confidence 99999999984 7788999999999999999999999765442 1 1123333 779999999753 3466
Q ss_pred cceEE
Q 023599 272 VGALS 276 (280)
Q Consensus 272 vG~~v 276 (280)
.|+++
T Consensus 220 ~G~v~ 224 (395)
T PRK05967 220 LGTVS 224 (395)
T ss_pred EEEEE
Confidence 67554
No 195
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.72 E-value=1.6e-16 Score=146.70 Aligned_cols=146 Identities=13% Similarity=0.137 Sum_probs=109.1
Q ss_pred CCCeEEeecccchhHHHHHHHHHHhh-cCCCEEEEeCCCCCChHHHHHH----cCCeeeEEEeecCCCCCcCHHHHHHHH
Q 023599 109 ENRVSTVQCLSGSGSLRIGADFLAKH-YYQHTVYLSQPTYGNHPNFFAA----AGLAMKTYHYYDPKTNGLDFQGMLQDL 183 (280)
Q Consensus 109 ~~~i~~v~t~g~~~al~~~~~~~~~~-~~Gd~Vli~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~~ 183 (280)
.+++.+ |+|+++++..+ +.++. .+||+|+++++.|+.+...++. .|++++.++. ++ + .+|++.+++++
T Consensus 129 ~~~v~~--~~g~t~~~~~~--~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~-~~-~-~~d~~~l~~~i 201 (447)
T PRK00451 129 VANASM--YDGATALAEAA--LMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY-ED-G-VTDLEALEAAV 201 (447)
T ss_pred cceEEe--cCcHHHHHHHH--HHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC-CC-C-CCCHHHHHHhc
Confidence 357777 99999999888 66654 6899999999999988877664 6999999998 43 4 78999999998
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE--cccCCCcccCcCCChhHHHHhhhcCCeEEEE--e
Q 023599 184 GAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF--DCAYQGFVMNMDADALPVRMFVADGGECLVA--Q 259 (280)
Q Consensus 184 ~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~--De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~--~ 259 (280)
.+++ .++++++| ||||.+.+ +++|.++|+++|+++++ |.+...+... ..+.+..+++. .
T Consensus 202 ~~~t---~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~~----------~~~~~~D~~~~s~~ 264 (447)
T PRK00451 202 DDDT---AAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLKP----------PGEYGADIVVGEGQ 264 (447)
T ss_pred CCCe---EEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCCC----------cccCCCCEEEECCC
Confidence 7654 37788888 89999854 77789999999999988 4332111110 01122233333 3
Q ss_pred cccccccccccccceEEEE
Q 023599 260 SYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 260 S~SK~~~~~G~RvG~~v~~ 278 (280)
+|||.+++.|+|+||+++.
T Consensus 265 k~~~~~~~~Gpg~G~l~~~ 283 (447)
T PRK00451 265 PLGIPLSFGGPYLGFFATR 283 (447)
T ss_pred cCCCCCCCCCCCchHHHhh
Confidence 7899999999999998764
No 196
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.71 E-value=2.5e-16 Score=140.96 Aligned_cols=163 Identities=15% Similarity=0.127 Sum_probs=117.6
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhh----cCC-CEEEEeCCCCCChH---HHHHHcCC
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKH----YYQ-HTVYLSQPTYGNHP---NFFAAAGL 159 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~----~~G-d~Vli~~P~y~~~~---~~~~~~G~ 159 (280)
.+++|+.+++++.. ++++|++ |+|+++++.++ +.++. .+| +.|++....|+.+. ..++..|+
T Consensus 44 ~~~~r~~la~~~g~------~~~~v~~--~~g~t~a~~~~--l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~ 113 (353)
T TIGR03235 44 VERARKQVAEALGA------DTEEVIF--TSGATESNNLA--ILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGF 113 (353)
T ss_pred HHHHHHHHHHHhCC------CCCeEEE--eCCHHHHHHHH--HHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCC
Confidence 45788888888632 2477887 99999999988 55544 356 77888876665443 33456799
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
+++.++. ++++.+|++.+++.+.+++ .++++++++||||.+++ +++|.++|+++|+++++|+++.-.....
T Consensus 114 ~v~~v~~--~~~~~~d~~~l~~~l~~~~---~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~~~- 184 (353)
T TIGR03235 114 TVTYLPV--DESGRIDVDELADAIRPDT---LLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQVVGKITV- 184 (353)
T ss_pred EEEEEcc--CCCCcCCHHHHHHhCCCCC---EEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhhcCCccc-
Confidence 9999998 3456789999999986544 48888999999999987 5777889999999999999965433321
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.+.+.+.. +++.|..|.+|.+| +|++++..
T Consensus 185 -------~~~~~~~D-~~~~s~~K~~gp~g--~g~l~~~~ 214 (353)
T TIGR03235 185 -------DLSADRID-LISCSGHKIYGPKG--IGALVIRK 214 (353)
T ss_pred -------cccccCCC-EEEeehhhcCCCCc--eEEEEEcc
Confidence 11112223 44668889877555 78887653
No 197
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.71 E-value=4.1e-16 Score=140.07 Aligned_cols=166 Identities=12% Similarity=0.026 Sum_probs=120.6
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCCh--HHHHHHcCCeeeEEE
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNH--PNFFAAAGLAMKTYH 165 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~--~~~~~~~G~~~~~v~ 165 (280)
.+++|+.+++++.... ..+.|++ |.|++++++++ +.++..+||.+++..+++.+. ...++..|++++.++
T Consensus 37 ~~~~r~~la~l~~~~~----~~~~i~~--t~~~t~al~~~--~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~ 108 (363)
T TIGR02326 37 VEQIRQQLLALATAEE----GYTSVLL--QGSGTFAVEAV--IGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVD 108 (363)
T ss_pred HHHHHHHHHHHhCCCC----CceEEEE--cCCCHHHHHHH--HHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEe
Confidence 3456788887764321 0135777 99999999999 777788888888877766544 356778999999999
Q ss_pred eecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHH
Q 023599 166 YYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPV 245 (280)
Q Consensus 166 ~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 245 (280)
+ ++++.+|++.+++++.++++ ..++++++++||||..++ +++|+++|+++|+++|+|+++.-.... ..+
T Consensus 109 ~--~~~~~~d~~~l~~~l~~~~~-~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~g~~~-----~~~ 177 (363)
T TIGR02326 109 T--GEVEPPDVVEVEAILAADPA-ITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSFGGIP-----IDI 177 (363)
T ss_pred C--CCCCCCCHHHHHHHHhhCCC-ccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccccCcc-----cch
Confidence 8 34567899999999876532 336778889999999987 568899999999999999876422111 111
Q ss_pred HHhhhcCCeEEEEecccccc-cccccccceEEEE
Q 023599 246 RMFVADGGECLVAQSYSKTM-GLYGERVGALSVV 278 (280)
Q Consensus 246 ~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~v~~ 278 (280)
. +.+.. +++.|++|.+ +.+| +||+++.
T Consensus 178 ~---~~~~D-~~~~s~~K~l~~p~G--~G~l~~~ 205 (363)
T TIGR02326 178 A---ELHID-YLISSANKCIQGVPG--FGFVIAR 205 (363)
T ss_pred h---hcCcc-EEEecCccccccCCc--ceEEEEC
Confidence 2 22223 6678999987 4445 7999875
No 198
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=2.8e-16 Score=140.90 Aligned_cols=164 Identities=13% Similarity=0.165 Sum_probs=117.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCC
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGL 159 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~ 159 (280)
....+.....+|+++++++.. .+++++ ++||++|+.++ + .++.+||+|+++.+.|+.....+.....
T Consensus 48 Y~R~~~p~~~~le~~lA~leg--------~~~~v~--~~sG~aAi~~~--l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~ 114 (364)
T PRK07269 48 YTRTKNPTRAKLEETLAAIES--------ADYALA--TSSGMSAIVLA--F-SVFPVGSKVVAVRDLYGGSFRWFNQQEK 114 (364)
T ss_pred eeCCCCccHHHHHHHHHHHhC--------CCeEEE--eCCHHHHHHHH--H-HHhCCCCEEEEecCCcCchHHHHHHHHh
Confidence 344455678899999999952 256676 99999999988 5 4578999999999999876654443211
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
+. .+.. ++..|++.++++++++++ +|++++|+||||.+. ++++|+++|+++|+++|+|++|..-...
T Consensus 115 ~~-~~~~----~~~~d~~~l~~~i~~~Tk---lV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~-- 181 (364)
T PRK07269 115 EG-RFHF----TYANTEEELIAAIEEDTD---IVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ-- 181 (364)
T ss_pred cC-cEEE----EecCCHHHHHHhcCcCce---EEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 10 1111 123589999999977655 899999999999876 5778899999999999999997543321
Q ss_pred CChhHHHHhhhcCCeEEEEeccccccccccc-ccceEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGE-RVGALSV 277 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~ 277 (280)
.+ + +.+.. +++.|+||.++-+|- =.||++.
T Consensus 182 ~p------l-~~gaD-ivv~S~tK~l~g~~d~~gG~v~~ 212 (364)
T PRK07269 182 RP------I-ELGAD-IVLHSATKYLSGHNDVLAGVVVT 212 (364)
T ss_pred Cc------h-hhCCc-EEEecCceeccCCCcccceEEEe
Confidence 11 1 22222 779999999975553 3566554
No 199
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.71 E-value=2.3e-16 Score=142.27 Aligned_cols=155 Identities=18% Similarity=0.173 Sum_probs=114.1
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHHHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFAAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~~~G~~~~ 162 (280)
....|++.++++... +..++ +++|+.|+.++ + .++.+||+|++++|.|+.... .+...|+++.
T Consensus 51 ~~~~Le~~la~l~g~--------~~al~--~~SG~~Al~~~--l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~ 117 (380)
T PRK06176 51 TRFALEELIADLEGG--------VKGFA--FASGLAGIHAV--F-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCT 117 (380)
T ss_pred hHHHHHHHHHHHhCC--------CCEEE--ECCHHHHHHHH--H-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEE
Confidence 367899999998532 23334 67778899866 4 567999999999999976543 3456788877
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.++. .|++.+++++.++++ +|++++|+||||.+.+ +++|+++|+++++++|+|++|....... +
T Consensus 118 ~vd~-------~d~e~l~~ai~~~t~---lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~--p- 181 (380)
T PRK06176 118 IIDT-------SDLSQIKKAIKPNTK---ALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN--P- 181 (380)
T ss_pred EcCC-------CCHHHHHHhcCcCce---EEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC--c-
Confidence 7765 378999998876544 8888999999999886 6677889999999999999998654421 1
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
+ +.+.. +++.|++|.++.+|-.+|-+++
T Consensus 182 -----~-~~gaD-ivv~S~tK~l~g~~d~~gG~vv 209 (380)
T PRK06176 182 -----L-LLGAD-IVVHSGTKYLGGHSDVVAGLVT 209 (380)
T ss_pred -----c-ccCCC-EEEecCceeccCCccceeeEEE
Confidence 1 12222 7799999999877754444443
No 200
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=2.8e-16 Score=142.28 Aligned_cols=154 Identities=16% Similarity=0.181 Sum_probs=114.5
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChH----HHHHHcCCeeeE
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHP----NFFAAAGLAMKT 163 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~----~~~~~~G~~~~~ 163 (280)
...|++.++++.... +.+ + +++|+.++.++ +. ++.+||+|++++|.|+... ..++..|++++.
T Consensus 56 ~~~le~~lA~l~g~~-------~~v-~--~~sG~~ai~~~--l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~ 122 (390)
T PRK08064 56 REALEDIIAELEGGT-------KGF-A--FASGMAAISTA--FL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTF 122 (390)
T ss_pred HHHHHHHHHHHhCCC-------CeE-E--ECCHHHHHHHH--HH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEE
Confidence 568899999985321 333 3 66678888877 54 6789999999999997543 344568999999
Q ss_pred EEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChh
Q 023599 164 YHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 164 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 243 (280)
++. .|++.+++++.++++ +|++++|+||||.+.+ +++|.++|+++++++|+|++|....... +
T Consensus 123 v~~-------~d~~~l~~~l~~~tk---lV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~--~-- 185 (390)
T PRK08064 123 VDM-------TNLEEVAQNIKPNTK---LFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQK--P-- 185 (390)
T ss_pred ECC-------CCHHHHHHhcCCCce---EEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccC--c--
Confidence 886 268899998876654 8999999999999875 5677888999999999999997754321 1
Q ss_pred HHHHhhhcCCeEEEEecccccccc-cccccceEEE
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGL-YGERVGALSV 277 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~-~G~RvG~~v~ 277 (280)
. +.+ .-+++.|+||.++. +|+..|++++
T Consensus 186 --~---~~g-~Divv~S~tK~~~G~~~~laG~~v~ 214 (390)
T PRK08064 186 --L---DLG-ADVVLHSATKFLAGHSDVLAGLAVV 214 (390)
T ss_pred --h---hhC-CcEEEeecceeccCCccceeEEEEe
Confidence 1 122 24678999999863 3456676664
No 201
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=3.9e-16 Score=142.81 Aligned_cols=156 Identities=18% Similarity=0.173 Sum_probs=120.9
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH----HHHHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN----FFAAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~----~~~~~G~~~~ 162 (280)
-...|++.++++... +..++ +++|++|+.++ +.+++.+||+|+++.+.|..... .+...|++++
T Consensus 64 ~~~~le~~lA~l~g~--------~~al~--~~SG~~Ai~~a--l~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~ 131 (427)
T PRK05994 64 TNAVLEERVAALEGG--------TAALA--VASGHAAQFLV--FHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVR 131 (427)
T ss_pred cHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEE
Confidence 356788889988522 33444 89999999999 77888999999999999986543 3567899988
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.++. .|++.+++++.++++ +|++++|+||||.+++ +++|+++|+++|+++|+|+++......
T Consensus 132 ~vd~-------~d~~~l~~ai~~~tk---lV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~----- 193 (427)
T PRK05994 132 WADA-------DDPASFERAITPRTK---AIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLI----- 193 (427)
T ss_pred EECC-------CCHHHHHHhcCcCCe---EEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccC-----
Confidence 8875 278899998876544 8888999999999886 567889999999999999999743221
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
..+ +.+.. +++.|++|.+|-+|-.+|.+++
T Consensus 194 ---~pl-~~gaD-ivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 194 ---RPI-EHGAD-IVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred ---Ccc-ccCCc-EEEEcCccccCCCCCcEEEEEE
Confidence 111 22233 7789999999888888887776
No 202
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.70 E-value=1.2e-15 Score=139.22 Aligned_cols=206 Identities=12% Similarity=-0.022 Sum_probs=128.1
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCC-----CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEee
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSAD-----KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQ 116 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~ 116 (280)
.+.++|+..++ -|+...+..+++..+.+.. -+.. ..|.+.....+|++.+++++. . ++.++
T Consensus 46 ~~~~~~~s~dy---lgl~~~p~v~~a~~~~~~~-~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-~------~~~~~--- 111 (407)
T PRK09064 46 REVTVWCSNDY---LGMGQHPKVIEAMIEALDR-CGAGAGGTRNISGTNHYHVELERELADLHG-K------EAALV--- 111 (407)
T ss_pred ceEEEEECCCC---cCCCCCHHHHHHHHHHHHH-cCCCCCCcCcCccCHHHHHHHHHHHHHHhC-C------CcEEE---
Confidence 56789988776 5555555555555554442 1110 112234446778899998752 1 24444
Q ss_pred cccchhHHHHHHHHHHhh--cCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC-CCcEEE
Q 023599 117 CLSGSGSLRIGADFLAKH--YYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP-SGAIVL 193 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~--~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-~~~~~v 193 (280)
.++|.++...+ +..+. .+|+.|+.....+......++..|+++..++. .|++.+++.++... .+.++|
T Consensus 112 ~~sG~~an~~a--i~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v 182 (407)
T PRK09064 112 FTSGYVSNDAT--LSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLI 182 (407)
T ss_pred ECcHHHHHHHH--HHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEE
Confidence 45556676665 33333 36766666654444444445556766654443 37788888776432 234589
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc-CCeEEEEeccccccccccccc
Q 023599 194 LQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD-GGECLVAQSYSKTMGLYGERV 272 (280)
Q Consensus 194 ~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~Rv 272 (280)
++++++||+|.+.+ +++|.++|+++++++|+||+|....+..... .+....+. ....++++||||.||++|
T Consensus 183 ~~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~--g~~~~~~~~~~~div~~t~sKa~g~~G--- 254 (407)
T PRK09064 183 AFESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGG--GIAERDGLMDRIDIIEGTLAKAFGVMG--- 254 (407)
T ss_pred EEeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCC--ChHHhcCCCCCCeEEEEecchhhhccC---
Confidence 99999999998887 6677888999999999999997443321111 11222222 123688999999999888
Q ss_pred ceEEEE
Q 023599 273 GALSVV 278 (280)
Q Consensus 273 G~~v~~ 278 (280)
||+++.
T Consensus 255 G~~~~~ 260 (407)
T PRK09064 255 GYIAGS 260 (407)
T ss_pred ceEecC
Confidence 988754
No 203
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.70 E-value=7.7e-16 Score=139.07 Aligned_cols=162 Identities=15% Similarity=0.102 Sum_probs=116.5
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhh---cCCCEEEEeCCCCCChHHH---HHHcCCee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKH---YYQHTVYLSQPTYGNHPNF---FAAAGLAM 161 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~---~~Gd~Vli~~P~y~~~~~~---~~~~G~~~ 161 (280)
..++|+.+++++.. .+++|++ |+|+++++.++ +..+. .+||+|++....|+.+... ++..|+++
T Consensus 44 ~~~~r~~la~~~g~------~~~~i~~--t~~~t~a~~~a--l~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v 113 (379)
T TIGR03402 44 VEEAREQVAKLLGA------EPDEIIF--TSGGTESDNTA--IKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKV 113 (379)
T ss_pred HHHHHHHHHHHhCC------CCCeEEE--eCcHHHHHHHH--HHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEE
Confidence 45677888887632 2477888 99999999988 55433 4568999988888665443 34469999
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
+.++. + +++.+|++.+++.+.+++ .++++++++||||.+++.+ +|.++|+++|+++++|+++..-...
T Consensus 114 ~~v~~-~-~~g~~~~~~l~~~i~~~~---~lv~i~~~~n~tG~~~~~~---~I~~l~~~~g~~vivD~~~~~g~~~---- 181 (379)
T TIGR03402 114 TYLPV-D-EEGRLDLEELRAAITDDT---ALVSVMWANNETGTIFPIE---EIGEIAKERGALFHTDAVQAVGKIP---- 181 (379)
T ss_pred EEEcc-C-CCCcCCHHHHHHhcCCCc---EEEEEEcccCCeeecccHH---HHHHHHHHcCCEEEEECcccccccc----
Confidence 99997 3 345689999999997654 3888999999999999864 6788999999999999998643221
Q ss_pred hhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+.+.+.. +++.|..|.+|.+| +|++.+.
T Consensus 182 ----~~~~~~~~D-~~~~s~~K~~gp~G--~g~l~v~ 211 (379)
T TIGR03402 182 ----IDLKEMNID-MLSLSGHKLHGPKG--VGALYIR 211 (379)
T ss_pred ----cCcccCCCC-EEEEcHHHcCCCCc--eEEEEEC
Confidence 111112222 45667779777555 6666553
No 204
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.70 E-value=7.6e-16 Score=140.23 Aligned_cols=163 Identities=14% Similarity=0.108 Sum_probs=120.4
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh----hcCCCEEEEeCCCCCChHHHH---HHcCC
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK----HYYQHTVYLSQPTYGNHPNFF---AAAGL 159 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~----~~~Gd~Vli~~P~y~~~~~~~---~~~G~ 159 (280)
..+++|+.+++++.. .+++|++ |+|+++++.++ +..+ ..+||+|+++.+.|..+...+ +..|+
T Consensus 48 ~~~~~r~~la~~~g~------~~~~v~~--~~g~t~a~~~~--l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~ 117 (402)
T TIGR02006 48 AVENARNQVAELIGA------DSREIVF--TSGATESNNLA--IKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGF 117 (402)
T ss_pred HHHHHHHHHHHHhCC------CCCeEEE--eCCHHHHHHHH--HHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCC
Confidence 356678888888532 2477887 99999999988 4433 358999999999998765444 45699
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
+++.++. + +++.+|++.+++.+.+++ .++++++++||||.+.+ +++|.++|+++|+++++|+++.......
T Consensus 118 ~v~~v~~-~-~~~~~d~~~l~~~l~~~~---~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~~~~- 188 (402)
T TIGR02006 118 EVTYLPP-K-SNGLIDLEELKAAIRDDT---ILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGKIPI- 188 (402)
T ss_pred EEEEEcc-C-CCCcCCHHHHHHhcCCCC---EEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCCccc-
Confidence 9999998 3 456789999999987654 48889999999999886 5677889999999999999986433211
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.+.+.+.. +++.|..|.+|.+| +|++++.
T Consensus 189 -------~~~~~~~D-~~~~s~~K~~gp~G--~G~l~~~ 217 (402)
T TIGR02006 189 -------NVNELKVD-LMSISGHKIYGPKG--IGALYVR 217 (402)
T ss_pred -------CccccCCC-EEEEehhhhcCCCc--eEEEEEc
Confidence 11112222 55777779887446 7877765
No 205
>PLN02509 cystathionine beta-lyase
Probab=99.70 E-value=6.2e-16 Score=141.92 Aligned_cols=164 Identities=17% Similarity=0.211 Sum_probs=116.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH----HH
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF----FA 155 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~----~~ 155 (280)
+.|... |.+ .++++.+++....+ .++.++ +++|++++.++ + .++.+||+|++++|.|+.+... +.
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~--~~SG~aAi~~i--l-~ll~~GD~VI~~~~~y~~t~~ll~~~l~ 193 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFC--FTSGMAALSAV--T-HLIKNGEEIVAGDDVYGGSDRLLSQVVP 193 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEE--eCcHHHHHHHH--H-HHhCCCCEEEEcCCchhhHHHHHHHHHH
Confidence 446554 665 46666665544322 245555 78888888655 3 5688999999999999988644 44
Q ss_pred HcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcc
Q 023599 156 AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV 235 (280)
Q Consensus 156 ~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~ 235 (280)
..|++++.++. .|++.+++++.++++ +|++++|+||||.+ .++++|+++|+++|+++|+|++|....
T Consensus 194 ~~G~~v~~vd~-------~d~e~l~~ai~~~Tk---lV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~ 260 (464)
T PLN02509 194 RSGVVVKRVNT-------TNLDEVAAAIGPQTK---LVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_pred HCCeEEEEeCC-------CCHHHHHHhCCcCCe---EEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccc
Confidence 67888887764 368899998876554 88999999999974 678899999999999999999986544
Q ss_pred cCcCCChhHHHHhhhcCCeEEEEeccccccccccc-ccceEEE
Q 023599 236 MNMDADALPVRMFVADGGECLVAQSYSKTMGLYGE-RVGALSV 277 (280)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~ 277 (280)
... .+ +.+. -+++.|++|.++.+|- =.|.+++
T Consensus 261 ~~~--------pl-~~ga-Divv~S~tK~l~G~gdv~gG~v~~ 293 (464)
T PLN02509 261 LSR--------PL-ELGA-DIVMHSATKFIAGHSDVMAGVLAV 293 (464)
T ss_pred cCC--------hh-hcCC-cEEEecCcccccCCCccceeEEEe
Confidence 321 11 2222 3779999999975453 3555543
No 206
>PRK05968 hypothetical protein; Provisional
Probab=99.70 E-value=8.4e-16 Score=139.14 Aligned_cols=156 Identities=16% Similarity=0.122 Sum_probs=116.7
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChH----HHHHHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHP----NFFAAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~----~~~~~~G~~~~ 162 (280)
....|++.++++... +..++ +++|+.|+.++ +.+++.+||+|+++.+.|.... ..+...|++++
T Consensus 64 ~~~~le~~lA~l~g~--------~~av~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~ 131 (389)
T PRK05968 64 TVRAFEEMLAKLEGA--------EDARG--FASGMAAISST--VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVD 131 (389)
T ss_pred hHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEE
Confidence 367899999998532 22334 67778899988 7778899999999999998643 45566799988
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.++. .|++.+++++ ++++ +|++++|+||+ +...++++|+++|+++|+++|+|++|....+.. +
T Consensus 132 ~vd~-------~d~~~l~~~i-~~tk---lV~ie~pt~~~---~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--p- 194 (389)
T PRK05968 132 YVDG-------RDEEAVAKAL-PGAK---LLYLESPTSWV---FELQDVAALAALAKRHGVVTMIDNSWASPVFQR--P- 194 (389)
T ss_pred EeCC-------CCHHHHHHhc-ccCC---EEEEECCCCCC---CcHHHHHHHHHHHHHcCCEEEEECCCcchhccC--c-
Confidence 8875 2788898887 3444 77776655555 677899999999999999999999997765421 1
Q ss_pred hHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
. ..+. -+++.|+||.++.+| ++.|+++..
T Consensus 195 ---~---~~g~-Divv~S~tK~l~g~~~~~gG~i~~~ 224 (389)
T PRK05968 195 ---I---TLGV-DLVIHSASKYLGGHSDTVAGVVAGS 224 (389)
T ss_pred ---h---hcCC-cEEEeeccccccCCCCeEEEEEEEC
Confidence 1 1122 367889999998766 578887743
No 207
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.69 E-value=1.7e-15 Score=137.02 Aligned_cols=187 Identities=15% Similarity=0.090 Sum_probs=127.9
Q ss_pred cchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh-hcCCC
Q 023599 60 LLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK-HYYQH 138 (280)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~Gd 138 (280)
...+.++...+.+. .+ .|....+...|++++++++.. ++.++ ++||++|+.++ +.++ +.+||
T Consensus 8 ~~~~~~~~v~~~~~--~~---~~~~g~~~~~le~~la~~~g~--------~~~v~--~~sgt~al~~~--l~al~~~~Gd 70 (380)
T TIGR03588 8 IDQDDIDAVVEVLK--SD---FLTQGPTVPAFEEALAEYVGA--------KYAVA--FNSATSALHIA--CLALGVGPGD 70 (380)
T ss_pred CCHHHHHHHHHHHh--cC---CccCChhHHHHHHHHHHHHCC--------CeEEE--EcCHHHHHHHH--HHHcCCCCCC
Confidence 33444444444444 22 243445678999999999743 23344 67889999999 7776 67999
Q ss_pred EEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHH
Q 023599 139 TVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP-SGAIVLLQASGHNPTGIDPTAQQWEQIRQL 217 (280)
Q Consensus 139 ~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~ 217 (280)
+|+++.|+|..+...+...|++++.+++ +++++.+|++.+++.+++.. ++..+|+. +|++|...+ +++|.++
T Consensus 71 ~Viv~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~---~~~i~~l 143 (380)
T TIGR03588 71 RVWTTPITFVATANCALYCGAKVDFVDI-DPDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD---MQAIAAL 143 (380)
T ss_pred EEEeCCcchHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCC---HHHHHHH
Confidence 9999999999999889999999999998 56677899999999997310 11225553 568897654 6778899
Q ss_pred HHhCCceeEEcccCCCcc-cCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 218 MRLKRLLPFFDCAYQGFV-MNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 218 ~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
|+++|++||+|+++.... ++. ... ... +.++-+++..+.+|.++. | .-|+++.
T Consensus 144 ~~~~~~~lI~D~a~a~g~~~~~-~~~---g~~-~~~d~~~~S~~~~K~~~~-~-~GG~v~~ 197 (380)
T TIGR03588 144 AKKHGLKIIEDASHALGAEYGG-KPV---GNC-RYADATVFSFHPVKIITT-A-EGGAVTT 197 (380)
T ss_pred HHHcCCEEEEECCCcccCccCC-EeC---CCc-cccceEEEecCCCCcccc-c-CceEEEE
Confidence 999999999999997653 332 111 110 122333333334588863 4 5666654
No 208
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.68 E-value=6e-15 Score=133.19 Aligned_cols=216 Identities=12% Similarity=0.069 Sum_probs=135.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|.-...-|+ ..+..++++.+++. .. . +.......++++.+++++..... .+.+++ +++
T Consensus 27 ~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~--~~--~-~~~~~~~~~~~~~la~~l~~~~~----~~~~~~--~~s 94 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLD--DI--W-HVSNLFTNSLQEEVASLLAENSA----GDLVFF--CNS 94 (377)
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHH--hc--c-ccccccCCHHHHHHHHHHHhcCC----CCEEEE--eCC
Confidence 4567899988852112343 34444555555554 11 1 11223456889999999865432 156666 999
Q ss_pred chhHHHHHHHHHHhhcCC-CEEEEeCCCCCChHHH-HHHcCCeee---EEEeecCCCC--CcCHHHHHHHHhcCCCCcEE
Q 023599 120 GSGSLRIGADFLAKHYYQ-HTVYLSQPTYGNHPNF-FAAAGLAMK---TYHYYDPKTN--GLDFQGMLQDLGAAPSGAIV 192 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~G-d~Vli~~P~y~~~~~~-~~~~G~~~~---~v~~~~~~~~--~~d~~~l~~~~~~~~~~~~~ 192 (280)
|++|++.+..+. ...+| ++|++.+++|.+.... ....|.... ..+...+..+ ..|++.+++.+.++ .++
T Consensus 95 G~~a~~~A~~~a-~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~ 170 (377)
T PRK02936 95 GAEANEAALKLA-RKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEE---VAA 170 (377)
T ss_pred cHHHHHHHHHHH-HHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCC---eEE
Confidence 999999994322 22344 6799999999754322 222221110 1111000000 12788999888644 347
Q ss_pred EEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccc
Q 023599 193 LLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGER 271 (280)
Q Consensus 193 v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 271 (280)
+++..+++++|.. .+++.+++|.++|++||+++|+||+|.+|.... . ..+.... +...++ .+|||.++ +|+|
T Consensus 171 ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g-~-~~~~~~~-~~~~di---~t~sK~l~-~G~~ 243 (377)
T PRK02936 171 VMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG-T-LFAYEQF-GLDPDI---VTVAKGLG-NGIP 243 (377)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc-h-hhHHHhh-CCCCcE---EEEccccc-CCCc
Confidence 8888889999877 578999999999999999999999998876642 1 1121122 222343 37999999 9999
Q ss_pred cceEEEE
Q 023599 272 VGALSVV 278 (280)
Q Consensus 272 vG~~v~~ 278 (280)
+||++..
T Consensus 244 ig~v~~~ 250 (377)
T PRK02936 244 VGAMIGK 250 (377)
T ss_pred cEEEEEc
Confidence 9999875
No 209
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.68 E-value=3.3e-15 Score=136.07 Aligned_cols=206 Identities=11% Similarity=-0.024 Sum_probs=130.1
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCC-----CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEee
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSAD-----KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQ 116 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~ 116 (280)
...++|+..+| -|+...+..++++.+.+.+ -+.. .-|.......+|++.+++++. . +..++
T Consensus 45 ~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~-~~~~~~~s~~~~g~~~~~~~Le~~la~~~g-~-------~~~l~-- 110 (402)
T TIGR01821 45 KDVTVWCSNDY---LGMGQHPEVLQAMHETLDK-YGAGAGGTRNISGTNIPHVELEAELADLHG-K-------ESALV-- 110 (402)
T ss_pred eeEEEeEccCc---CCCCCCHHHHHHHHHHHHH-cCCCCcchhhhhCCcHHHHHHHHHHHHHhC-C-------CeEEE--
Confidence 46789988887 5555555566665555542 1110 012222335678899998863 1 23344
Q ss_pred cccchhHHHHHHHHHHhhc--CCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC-CCcEEE
Q 023599 117 CLSGSGSLRIGADFLAKHY--YQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP-SGAIVL 193 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~--~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-~~~~~v 193 (280)
+++|++|+..+ +..+.. +|+.|+.....+......+...|+++..++. .|.+.+++.+.... ++.++|
T Consensus 111 ~~sG~~an~~a--i~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v 181 (402)
T TIGR01821 111 FTSGYVANDAT--LATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKII 181 (402)
T ss_pred ECchHHHHHHH--HHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEE
Confidence 66678888877 544443 6776666655554444555566776655443 36777888776432 234588
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc-CCeEEEEeccccccccccccc
Q 023599 194 LQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD-GGECLVAQSYSKTMGLYGERV 272 (280)
Q Consensus 194 ~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~Rv 272 (280)
++++|+||||.+.+ +++|.++|+++++++|+||+|....+..... ......+. ....++++||||.||++|
T Consensus 182 ~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~--g~~~~~~~~~~~div~~t~sKa~g~~G--- 253 (402)
T TIGR01821 182 AFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGG--GIAERDGLMHRIDIIEGTLAKAFGVVG--- 253 (402)
T ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCC--ccchhccCCCCCeEEEEechhhhccCC---
Confidence 99999999999987 6677889999999999999998444421111 01111111 123578899999999888
Q ss_pred ceEEEE
Q 023599 273 GALSVV 278 (280)
Q Consensus 273 G~~v~~ 278 (280)
||++..
T Consensus 254 G~i~~~ 259 (402)
T TIGR01821 254 GYIAAS 259 (402)
T ss_pred ceeecC
Confidence 887654
No 210
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.67 E-value=3.2e-15 Score=134.46 Aligned_cols=169 Identities=12% Similarity=0.128 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhc----CCCEEEEeCCCCCChHHHHHHcCCeeeEE
Q 023599 89 PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHY----YQHTVYLSQPTYGNHPNFFAAAGLAMKTY 164 (280)
Q Consensus 89 ~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~----~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v 164 (280)
.++++.+++++. . ++.++++ ++||++++..+ +..... +||+|++.++.|..+...++..|++++.+
T Consensus 62 ~~~~~~la~~~g-~-----~~~~~~~--~~ggt~a~~~a--~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v 131 (371)
T PRK13520 62 EEAVEMLGELLH-L-----PDAYGYI--TSGGTEANIQA--VRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRA 131 (371)
T ss_pred HHHHHHHHHHhC-C-----CCCCeEE--ecCcHHHHHHH--HHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEe
Confidence 456777777652 2 1245666 99999999888 433322 57999999999988888888899999999
Q ss_pred EeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhH
Q 023599 165 HYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALP 244 (280)
Q Consensus 165 ~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 244 (280)
+. ++++.+|++.+++++.+++. +++...++||||.+.+ +++|.++|+++|+++++|++|..+..........
T Consensus 132 ~~--~~~~~~d~~~l~~~i~~~~~---~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~ 203 (371)
T PRK13520 132 PL--DDDYRVDVKAVEDLIDDNTI---GIVGIAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPN 203 (371)
T ss_pred cC--CCCCcCCHHHHHHHHhhCCE---EEEEEcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCC
Confidence 87 34567899999999976543 5556678999999887 6677888999999999999998765321011000
Q ss_pred HHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 245 VRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 245 ~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+...+.+. +..|..| |+++|.++|++++.
T Consensus 204 -~~~~~~~vd~-~~~s~~K-~~~a~~~~G~~~~~ 234 (371)
T PRK13520 204 -FDFSLPGVDS-ITIDPHK-MGLAPIPAGGILFR 234 (371)
T ss_pred -ccccCCCCce-EEECCcc-ccCccCCceEEEEc
Confidence 0000011122 2345667 66788999988764
No 211
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.66 E-value=4.8e-15 Score=133.49 Aligned_cols=169 Identities=14% Similarity=0.112 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhh------cCCCEEEEeCCCCCChHHHHHHcCCeee
Q 023599 89 PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKH------YYQHTVYLSQPTYGNHPNFFAAAGLAMK 162 (280)
Q Consensus 89 ~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~------~~Gd~Vli~~P~y~~~~~~~~~~G~~~~ 162 (280)
.++++.+++++.. +++++++ ++|+++++.++ +.++. .+||+|++++++|..+...++..|++++
T Consensus 62 ~~~~~~la~~~g~------~~~~~~~--~~g~~~~~~~~--~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~ 131 (373)
T TIGR03812 62 EEVVGSLGNLLHL------PDAYGYI--VSGGTEANIQA--VRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELR 131 (373)
T ss_pred HHHHHHHHHHhCC------CCCCeEE--eccHHHHHHHH--HHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEE
Confidence 4567777777532 2356666 89999998777 33322 3679999999999999888999999999
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC---
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD--- 239 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~--- 239 (280)
.++. ++++.+|++.+++++.+++ ..++++ .|+||||.+.+ +++|+++|+++++++++|++|..+.....
T Consensus 132 ~v~~--~~~~~~d~~~l~~~l~~~~--~~vv~~-~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~ 203 (373)
T TIGR03812 132 YAPL--DEDYTVDVKDVEDLIDDNT--IGIVGI-AGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKG 203 (373)
T ss_pred EEee--CCCCCcCHHHHHHHHhhCc--EEEEEE-CCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcC
Confidence 9998 3457789999999997654 224444 47999999865 55668889999999999999976643100
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..... ..+...+-+.+ ..|..| |++++.|+|++++.
T Consensus 204 ~~~~~-~d~~~~~~d~~-~~s~~K-~~~~~~~~G~~~~~ 239 (373)
T TIGR03812 204 YNPPP-FDFSLPGVQSI-TIDPHK-MGLSPIPAGGILFR 239 (373)
T ss_pred CCCCC-ccccCCCCCEE-EECccc-cCCCcCCceEEEEe
Confidence 00000 00000111222 346669 77788999987754
No 212
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.66 E-value=5.8e-15 Score=133.83 Aligned_cols=173 Identities=11% Similarity=0.013 Sum_probs=117.0
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCee
Q 023599 82 YLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAM 161 (280)
Q Consensus 82 y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~ 161 (280)
|+...+..+|++++|+++... +.++ .++|+.+...+ +.+++.+||.|++.++.|..+...+...++++
T Consensus 39 yg~~~~~~~LE~~lA~~~g~e-------~al~---~~sG~~a~~~~--i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~ 106 (392)
T PLN03227 39 YGTIDAHLELEQCMAEFLGTE-------SAIL---YSDGASTTSST--VAAFAKRGDLLVVDRGVNEALLVGVSLSRANV 106 (392)
T ss_pred cCChHHHHHHHHHHHHHhCCC-------cEEE---ecCcHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHHcCCeE
Confidence 666667889999999996431 4444 45555555566 66788999999999999998887777777777
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcC--------CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAA--------PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG 233 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~--------~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~ 233 (280)
+.++.. + .-+++.+.+.+.+. +++.++|++.+++||+|.+.+ +++++++|++||+++|+||+|.
T Consensus 107 ~~~~~~--d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~- 178 (392)
T PLN03227 107 RWFRHN--D--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS- 178 (392)
T ss_pred EEeCCC--C--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-
Confidence 777651 1 12344444444321 124568999999999999998 5677899999999999999997
Q ss_pred cccCcCCChhHHHHhhh---cCCeEEEEecccccccccccccceEEEE
Q 023599 234 FVMNMDADALPVRMFVA---DGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 234 ~~~~~~~~~~~~~~~~~---~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+..-...... .....+ ....-|++.|+||.+| ++.||++..
T Consensus 179 ~g~~g~~G~g-~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~ 222 (392)
T PLN03227 179 FGTLGKSGRG-SLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGS 222 (392)
T ss_pred ccccCCCCCc-HHHHcCCCCCCCceEEEeechhhhh---ccCcEEecC
Confidence 4321111111 122111 1223577888999764 677877653
No 213
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.66 E-value=5.1e-15 Score=134.84 Aligned_cols=150 Identities=14% Similarity=0.137 Sum_probs=101.2
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhc-----CC-CEEEEeCCCCCChHHHHHHcC-------------CeeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHY-----YQ-HTVYLSQPTYGNHPNFFAAAG-------------LAMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~-----~G-d~Vli~~P~y~~~~~~~~~~G-------------~~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+..+..... .| ++|+..+-+|.+........+ ..+..++.
T Consensus 98 ~~~~~--~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 171 (403)
T PRK05093 98 ERVFF--ANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF---- 171 (403)
T ss_pred CEEEE--eCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC----
Confidence 57777 9999999999954332211 23 578888888876543221111 11222221
Q ss_pred CCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCC--CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHh
Q 023599 171 TNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDP--TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMF 248 (280)
Q Consensus 171 ~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~--~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 248 (280)
.|++.+++.+.++ .++|+++ |.||+|.++ +.+.+++|+++|++||+++|+||+|.++.+... ..+.. .
T Consensus 172 ---~d~~~l~~~l~~~---~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~-~ 241 (403)
T PRK05093 172 ---NDLAAVKAVIDDH---TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD--LFAYM-H 241 (403)
T ss_pred ---CCHHHHHHHhcCC---eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--chhhh-h
Confidence 2789999888643 2355554 899998876 899999999999999999999999998866432 11111 1
Q ss_pred hhcCCeEEEEecccccccccccccceEEEEc
Q 023599 249 VADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 249 ~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.+.... +.||||.++ +|+|+||++++.
T Consensus 242 ~~~~pd---i~s~sK~l~-~G~rig~vv~~~ 268 (403)
T PRK05093 242 YGVTPD---ILTSAKALG-GGFPIGAMLTTA 268 (403)
T ss_pred cCCCCC---EEEeccccc-CCcceEEEEEcH
Confidence 121122 569999999 999999999864
No 214
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.65 E-value=2.6e-15 Score=137.29 Aligned_cols=142 Identities=16% Similarity=0.132 Sum_probs=100.0
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH-----HHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhc-CCCCc
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN-----FFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGA-APSGA 190 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~-----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~~ 190 (280)
+++|+.++.++ +.+++.+||+|+++.|+|..+.. .+...|++++.++. +.+++.+|++.+++++++ +++
T Consensus 93 ~~sgt~al~~~--l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~~~~~k-- 167 (416)
T PRK00011 93 PHSGSQANAAV--YFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV-DEETGLIDYDEVEKLALEHKPK-- 167 (416)
T ss_pred cCCchHHHHHH--HHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCc-CcccCCcCHHHHHHHHHhcCCC--
Confidence 44568899888 77778999999999999976432 12334678888887 445578999999999975 333
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC-cccCcCCChhHHHHhhhcCCeEEEEecccccccccc
Q 023599 191 IVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG-FVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYG 269 (280)
Q Consensus 191 ~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 269 (280)
++++++++|| .. .++++|.++|+++|+++|+|++|.. +.+....+ ..+ + .. -++++|+||.+ +|
T Consensus 168 -~v~~~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~----~~~-~-~~-di~~~S~~K~l--~g 232 (416)
T PRK00011 168 -LIIAGASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHP----SPV-P-HA-DVVTTTTHKTL--RG 232 (416)
T ss_pred -EEEECCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccC----CCC-C-CC-cEEEecCCcCC--CC
Confidence 6666555554 32 3478889999999999999999743 22221101 011 1 12 36699999976 79
Q ss_pred cccceEEEE
Q 023599 270 ERVGALSVV 278 (280)
Q Consensus 270 ~RvG~~v~~ 278 (280)
.|.||+++.
T Consensus 233 ~~gg~i~~~ 241 (416)
T PRK00011 233 PRGGLILTN 241 (416)
T ss_pred CCceEEEeC
Confidence 999999874
No 215
>PRK07505 hypothetical protein; Provisional
Probab=99.65 E-value=1.2e-14 Score=132.45 Aligned_cols=207 Identities=14% Similarity=0.033 Sum_probs=120.9
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCC-----CCCCCCHHHHHHHHHHHhCCCCccccCCCeEE
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEY-----LPITGLPEFNKLSAKLIFGADSPAIKENRVST 114 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-----~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~ 114 (280)
.+...+||+...+ -++...++.+++..+.+.. .+..... .......+|++.+++++.. +.++
T Consensus 44 ~g~~~ld~~s~~~---lgl~~~p~v~~A~~~~l~~-~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--------~~~~- 110 (402)
T PRK07505 44 DGHTFVNFVSCSY---LGLDTHPAIIEGAVDALKR-TGSLHLSSSRTRVRSQILKDLEEALSELFGA--------SVLT- 110 (402)
T ss_pred CCceEEEeecCCc---cCCCCCHHHHHHHHHHHHH-hCCCCCCccchhhhhHHHHHHHHHHHHHhCC--------CEEE-
Confidence 3567899976543 3322344444444444441 1100101 1122345677777776411 3333
Q ss_pred eecccchhHHHHHHHHHH--hhcCCC-EEEEeCCCCCChHH---HHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCC
Q 023599 115 VQCLSGSGSLRIGADFLA--KHYYQH-TVYLSQPTYGNHPN---FFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPS 188 (280)
Q Consensus 115 v~t~g~~~al~~~~~~~~--~~~~Gd-~Vli~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~ 188 (280)
+++|++|...+..+.. ...+|+ .|++.+..|.+... .....+.+++.+|. .|++.+++++.++++
T Consensus 111 --~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~ 181 (402)
T PRK07505 111 --FTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKT 181 (402)
T ss_pred --ECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCC
Confidence 4456677776622222 112243 46677766643221 11223456666664 378999998865543
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhh-cCCeEEEEecccccccc
Q 023599 189 GAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVA-DGGECLVAQSYSKTMGL 267 (280)
Q Consensus 189 ~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~ 267 (280)
++++++|+||||.+++ +++|.++|+++++++|+||+|....+...........+.. ..+++++++||||.|+.
T Consensus 182 ---~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~ 255 (402)
T PRK07505 182 ---VAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGA 255 (402)
T ss_pred ---EEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhc
Confidence 7778899999999998 5667788999999999999986544421111111122221 35689999999999997
Q ss_pred cccccceEEE
Q 023599 268 YGERVGALSV 277 (280)
Q Consensus 268 ~G~RvG~~v~ 277 (280)
+| ||+++
T Consensus 256 ~G---g~~~~ 262 (402)
T PRK07505 256 SG---GVIML 262 (402)
T ss_pred cC---eEEEe
Confidence 76 88764
No 216
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.64 E-value=1.2e-14 Score=132.18 Aligned_cols=151 Identities=10% Similarity=0.081 Sum_probs=102.5
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh-------cCC-CEEEEeCCCCCChH-HHHHHcCCe------------eeEEEeec
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH-------YYQ-HTVYLSQPTYGNHP-NFFAAAGLA------------MKTYHYYD 168 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~-------~~G-d~Vli~~P~y~~~~-~~~~~~G~~------------~~~v~~~~ 168 (280)
+.+++ +++|++|++.+..+.... .+| ++|+..+-+|.+.. ..+...+.. +..++.
T Consensus 98 ~~~~~--~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 173 (396)
T PRK04073 98 DMVLP--MNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-- 173 (396)
T ss_pred CeEEE--cCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC--
Confidence 56676 999999999884433221 134 67888877776543 222222211 112221
Q ss_pred CCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHH-HHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH
Q 023599 169 PKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQ-QWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM 247 (280)
Q Consensus 169 ~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~-~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 247 (280)
.|++.+++.+.+++ +++++++++||||.+++.+ .+++|.++|++||+++|+||+|..+.... .... ..
T Consensus 174 -----~d~~~l~~~i~~~~---~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g--~~~~-~~ 242 (396)
T PRK04073 174 -----GDLEALKAAITPNT---AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG--KLFA-CD 242 (396)
T ss_pred -----CCHHHHHHhcccCe---EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc--HHHH-hh
Confidence 27889998886543 4888888999999998765 59999999999999999999999876532 1111 11
Q ss_pred hhhcCCeEEEEecccccccccccccceEEEE
Q 023599 248 FVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 248 ~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+...++ .+|||.+|.+|+|+||+++.
T Consensus 243 ~~~~~pdi---~~~sK~lg~gg~~ig~~~~~ 270 (396)
T PRK04073 243 WDNVTPDM---YILGKALGGGVFPISCVAAN 270 (396)
T ss_pred hcCCCCCE---EEecccccCCCCcceEEEEc
Confidence 22222343 35799999888999999875
No 217
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=7.4e-15 Score=134.33 Aligned_cols=156 Identities=18% Similarity=0.202 Sum_probs=121.7
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH----HHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF----AAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~----~~~G~~~~ 162 (280)
-...|++.+|++... +..++ |++|++|+.++ +.+++.+||+|+++...|......+ ...|++++
T Consensus 65 ~~~~le~~lA~l~g~--------~~av~--~sSGt~Al~~a--l~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~ 132 (433)
T PRK08134 65 TVAVLEERVAALEGG--------VGAIA--TASGQAALHLA--IATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETT 132 (433)
T ss_pred HHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEE
Confidence 367899999988632 23444 99999999999 7777889999999999998664443 45799998
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.++. + |++.++++++++++ +|++.+|+||||.+.+ +++|+++|+++|+++|+|.++..-...
T Consensus 133 ~vd~-~------d~~~l~~~i~~~Tk---lV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~----- 194 (433)
T PRK08134 133 FVKP-G------DIDGWRAAIRPNTR---LLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLL----- 194 (433)
T ss_pred EECC-C------CHHHHHHhcCCCCe---EEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-----
Confidence 8886 1 78999999987655 7888899999999887 567789999999999999998644331
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
..+ +.+.. +++.|.+|.++-+|-.+|.+++
T Consensus 195 ---~pl-~~GaD-~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 195 ---RPF-EHGAD-LVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred ---Cch-hcCCC-EEEeccccccCCCCCceEEEEE
Confidence 111 22223 6689999999888988888766
No 218
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.63 E-value=3.5e-14 Score=129.51 Aligned_cols=206 Identities=9% Similarity=-0.056 Sum_probs=128.4
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCC----CCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKE----YLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
...++|+..+| -++...+..++++.+.+..-...... +....-..+|++.+++++.. +..++ +
T Consensus 45 ~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~--~ 111 (406)
T PRK13393 45 REVTVWCSNDY---LGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--------EAALL--F 111 (406)
T ss_pred ccEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--------CcEEE--e
Confidence 46788988887 34334444444444444410000000 11111246788888888521 34444 5
Q ss_pred ccchhHHHHHHHHHHhhc--CCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC-CCCcEEEE
Q 023599 118 LSGSGSLRIGADFLAKHY--YQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA-PSGAIVLL 194 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~~--~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~~v~ 194 (280)
++|++|...+ +..+.. +||.|++....|......++..|.++..++. .|++.+++.+... .++.++|+
T Consensus 112 ~SG~~An~~a--i~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~ 182 (406)
T PRK13393 112 TSGYVSNWAA--LSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVA 182 (406)
T ss_pred CCcHHHHHHH--HHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEE
Confidence 5666788877 444433 7787776666666556666677877766653 3677777777543 12345888
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCC-eEEEEecccccccccccccc
Q 023599 195 QASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGG-ECLVAQSYSKTMGLYGERVG 273 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~G~RvG 273 (280)
+++++|++|.+.+ +++|.++|+++++++|+||+|....+...... +....+... ..|+++||||.||++| |
T Consensus 183 ~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g--~~~~~~~~~~~~i~~~tlsKa~g~~G---G 254 (406)
T PRK13393 183 FESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGG--IAEREGLADRLTIIEGTLAKAFGVMG---G 254 (406)
T ss_pred EcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCc--hhhhcCCCCCCeEEEEeCchhhcccC---c
Confidence 9999999999988 66778889999999999999974443211111 111112222 3577899999999888 8
Q ss_pred eEEE
Q 023599 274 ALSV 277 (280)
Q Consensus 274 ~~v~ 277 (280)
|++.
T Consensus 255 ~~~~ 258 (406)
T PRK13393 255 YITG 258 (406)
T ss_pred eeeC
Confidence 8764
No 219
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.63 E-value=2.3e-14 Score=131.47 Aligned_cols=200 Identities=14% Similarity=-0.023 Sum_probs=132.5
Q ss_pred eeEeecceeecCC-CCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 44 KLNLGFGVYRTEE-GKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 44 ~i~l~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
...|+.|.+.-+. ....+.+.+.++.+.+. .. ...+++ -..+|++++++++.. +++++ ++||++
T Consensus 25 ~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~--~~-~~~~G~--~~~~fe~~lA~~~g~--------~~~v~--~~sGt~ 89 (438)
T PRK15407 25 PKPFVPGKSPIPPSGKVIDAKELQNLVDASL--DF-WLTTGR--FNDAFEKKLAEFLGV--------RYALL--VNSGSS 89 (438)
T ss_pred cccccCCCCCCCcCccCCCHHHHHHHHHHHH--hC-cccCCh--hHHHHHHHHHHHhCC--------CeEEE--ECCHHH
Confidence 3447888752111 12233444555555444 22 222222 257899999999632 34565 999999
Q ss_pred HHHHHHHHHHh---------hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEE
Q 023599 123 SLRIGADFLAK---------HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVL 193 (280)
Q Consensus 123 al~~~~~~~~~---------~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v 193 (280)
|+.++ +.++ +.+||+|+++.|+|..+...+...|++++.+++ +.+++.+|++.+++++.++++ +|
T Consensus 90 al~~a--L~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdv-d~~~~~id~~~le~~i~~~tk---aV 163 (438)
T PRK15407 90 ANLLA--FSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDV-ELPTYNIDASLLEAAVSPKTK---AI 163 (438)
T ss_pred HHHHH--HHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHHcCcCCe---EE
Confidence 99988 5543 478999999999999999999999999999998 556788999999999876543 55
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccc
Q 023599 194 LQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVG 273 (280)
Q Consensus 194 ~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 273 (280)
++++ ++|.. .++++|.++|+++|++||+|++++....-... .....++-.++-...+|.+. +|- -|
T Consensus 164 i~~~---~~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~------~~G~~gd~~~fSf~~~k~~~-~ge-GG 229 (438)
T PRK15407 164 MIAH---TLGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGR------MTGTFGDIATLSFYPAHHIT-MGE-GG 229 (438)
T ss_pred EEeC---CCCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCe------eeeccCceEEEeCCCCCCcc-ccC-ce
Confidence 5533 45542 46888999999999999999999765432111 11112222233333367775 455 37
Q ss_pred eEEEE
Q 023599 274 ALSVV 278 (280)
Q Consensus 274 ~~v~~ 278 (280)
+++..
T Consensus 230 ~l~t~ 234 (438)
T PRK15407 230 AVFTN 234 (438)
T ss_pred EEEEC
Confidence 77653
No 220
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.63 E-value=1.8e-14 Score=131.20 Aligned_cols=153 Identities=12% Similarity=0.039 Sum_probs=113.5
Q ss_pred CeEEeecccch-hHHHHHHHHHHhh--c-CCCEEEEeCCCCCChHHHHHHcCCeeeEEEe-ecCCCCCcCHHHHHHHHhc
Q 023599 111 RVSTVQCLSGS-GSLRIGADFLAKH--Y-YQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY-YDPKTNGLDFQGMLQDLGA 185 (280)
Q Consensus 111 ~i~~v~t~g~~-~al~~~~~~~~~~--~-~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~~~~ 185 (280)
..++ ++|++ .++.++ +.++- . +||+|+++.-++......+...|++++.++. .+++++.+|++.+++++++
T Consensus 125 ~a~~--v~~~Tg~al~la--L~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~ 200 (444)
T TIGR03531 125 SAFV--VPLATGMSLSLC--LSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEE 200 (444)
T ss_pred EEEE--ECCHHHHHHHHH--HHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHh
Confidence 4555 88888 477766 55433 2 5899999998888788888899999999995 2567799999999999986
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhh----hcCCeEEEEecc
Q 023599 186 APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFV----ADGGECLVAQSY 261 (280)
Q Consensus 186 ~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~----~~~~~~i~~~S~ 261 (280)
.+.+.+++++.+|+ |+.....+++++|.++|++||+++|+|++|+...... ..+. +.+.-.+++.|+
T Consensus 201 ~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~-------~~~~~~g~~~Grad~vv~s~ 271 (444)
T TIGR03531 201 IGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKY-------MELINKAIKVGRVDAVVSST 271 (444)
T ss_pred ccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhh-------hhhhhccccccCCCeEEEeC
Confidence 54244566666665 6666678899999999999999999999998533210 1111 111114567799
Q ss_pred cccccccccccceEEEE
Q 023599 262 SKTMGLYGERVGALSVV 278 (280)
Q Consensus 262 SK~~~~~G~RvG~~v~~ 278 (280)
+|.+.+||+ |++++.
T Consensus 272 hK~l~~pg~--Gg~I~~ 286 (444)
T TIGR03531 272 DKNFMVPVG--GAIIYS 286 (444)
T ss_pred ccCCCCCCC--EEEEEE
Confidence 999998888 887755
No 221
>PLN02651 cysteine desulfurase
Probab=99.63 E-value=1.2e-14 Score=130.62 Aligned_cols=162 Identities=17% Similarity=0.119 Sum_probs=115.9
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHH----hhcCCCEEEEeCCCCCChHHH---HHHcCCe
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLA----KHYYQHTVYLSQPTYGNHPNF---FAAAGLA 160 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~----~~~~Gd~Vli~~P~y~~~~~~---~~~~G~~ 160 (280)
.+++|+.+++++.. .++++++ |+|+++++.++ +.. ...+||+|++....|+.+... ++..|++
T Consensus 45 ~~~~r~~la~~~g~------~~~~v~~--t~~~t~a~~~~--l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~ 114 (364)
T PLN02651 45 VEKARAQVAALIGA------DPKEIIF--TSGATESNNLA--IKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFE 114 (364)
T ss_pred HHHHHHHHHHHhCC------CCCeEEE--eCCHHHHHHHH--HHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCE
Confidence 45677888887532 2477887 99999998877 333 246899999998777654333 3457889
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
++.++. ++++.+|++.+++++.++++ ++++++++||||.+.+ +++|.++|+++|+++++|.++.....+.
T Consensus 115 v~~v~~--~~~~~~d~~~l~~~i~~~t~---lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~~~~-- 184 (364)
T PLN02651 115 VTYLPV--KSDGLVDLDELAAAIRPDTA---LVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVGKIPV-- 184 (364)
T ss_pred EEEEcc--CCCCcCCHHHHHHhcCCCcE---EEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhhCCccc--
Confidence 999988 34567899999999976544 8899999999999887 5577889999999999999987543321
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.+.+.+.. +++.|.-|.+| ...+|++++.
T Consensus 185 ------~~~~~~~D-~~~~s~hK~~g--p~G~g~l~v~ 213 (364)
T PLN02651 185 ------DVDDLGVD-LMSISGHKIYG--PKGVGALYVR 213 (364)
T ss_pred ------CcccCCCC-EEEechhhhCC--CCceEEEEEc
Confidence 11122223 44677789433 3457777664
No 222
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.62 E-value=3e-14 Score=130.65 Aligned_cols=223 Identities=9% Similarity=0.034 Sum_probs=131.1
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|.....-|+ -.+...+++.+++. .. .+.+.+..+.+. ...+++++....+... .+.+.+ +++
T Consensus 39 dG~~~lD~~~g~~~~~lGh-~~~~i~~a~~~~~~--~~-~~~~~~~~~~~~-~~~la~~l~~~~~~~~-~~~~~f--~~s 110 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLK--KL-SHTCFQVLAYEP-YLELCEKMNQKVPGDF-AKKTLL--VTT 110 (425)
T ss_pred CCCEEEEcCCchhhcCCCC-CCHHHHHHHHHHHh--hC-CCccccccCCHH-HHHHHHHHHHhCCCCC-CCEEEE--eCC
Confidence 4567899987753121222 13333333333333 11 122222233343 3366666654322111 145565 777
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeee--------------E--EEeecCCCCCc--CHHHHHH
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMK--------------T--YHYYDPKTNGL--DFQGMLQ 181 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~--------------~--v~~~~~~~~~~--d~~~l~~ 181 (280)
|++|++.+..+........+|+..+++|.+....+...+.... . +|. +..+... +++.+++
T Consensus 111 Gsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~l~~ 189 (425)
T PRK08088 111 GSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPC-PLHGVSEDDAIASIER 189 (425)
T ss_pred cHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCc-cccCccHHHHHHHHHH
Confidence 8888887754433333345677779999887655554433211 1 121 0111111 1556888
Q ss_pred HHhc---CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEE
Q 023599 182 DLGA---APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVA 258 (280)
Q Consensus 182 ~~~~---~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~ 258 (280)
.+.. ......+++-+..+|+.....+.+.+++|+++|+++++++|+||+|.++.... .. ..+ +....+..+
T Consensus 190 ~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g--~~---~~~-~~~~~~pdi 263 (425)
T PRK08088 190 IFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTG--TL---FAM-EQMGVAADL 263 (425)
T ss_pred HHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--ch---hHH-hhcCCCCCE
Confidence 7752 12234566666778898888999999999999999999999999999875532 11 111 111234558
Q ss_pred ecccccccccccccceEEEE
Q 023599 259 QSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 259 ~S~SK~~~~~G~RvG~~v~~ 278 (280)
.||||.++ +|+|+||++++
T Consensus 264 ~s~sK~l~-~G~rig~v~~~ 282 (425)
T PRK08088 264 TTFAKSIA-GGFPLAGVTGR 282 (425)
T ss_pred EEEecccc-CCCcceeeEec
Confidence 99999998 99999999985
No 223
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.62 E-value=2.8e-14 Score=132.54 Aligned_cols=207 Identities=14% Similarity=0.123 Sum_probs=134.9
Q ss_pred EeecceeecCCCCccchHHHHHHHHHHhccCCCCCCC---CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 46 NLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEY---LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 46 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y---~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
-++.|.+ + ...++.+.+.+.+... -...+.| ...+|..+++..+.+++....+. ++..+..+.|+.+
T Consensus 72 ~~g~G~~-~---~~~~p~i~~~~~~~~~--~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~----~~~~l~~~~GA~a 141 (481)
T PRK04366 72 FYPLGSC-T---MKYNPKINEKVARLPG--FAELHPLQPEETVQGALELMYELQEWLKEITGM----DAVTLQPAAGAHG 141 (481)
T ss_pred eecCccc-C---CCCCHHHHHHHHhCcc--hhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC----CceEEEeCcHHHH
Confidence 3667764 2 2244444444443311 1124557 35678888888888887655443 2344422555555
Q ss_pred HHHHHHHHH-HhhcCCC----EEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecC
Q 023599 123 SLRIGADFL-AKHYYQH----TVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQAS 197 (280)
Q Consensus 123 al~~~~~~~-~~~~~Gd----~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~ 197 (280)
.+..+..+. ....+|| +|++++|.|+.+...++..|++++.++. + +++.+|++.|++++.++++ ++++++
T Consensus 142 ~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~-~-~~~~~D~e~L~~~i~~~t~---~V~v~~ 216 (481)
T PRK04366 142 ELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS-N-EDGLVDLEALKAAVGEDTA---ALMLTN 216 (481)
T ss_pred HHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec-C-CCCCcCHHHHHhhcccCCe---EEEEeC
Confidence 544331111 2355776 9999999999999999999999999998 3 4578999999999876544 777788
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccccc----ccccc
Q 023599 198 GHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLY----GERVG 273 (280)
Q Consensus 198 p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~RvG 273 (280)
|| |||.+ ..++++|+++|+++|+++++|.++.--.... .+ ..+.+.. ++++|..|.++.| |-.+|
T Consensus 217 Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~-~~------~~~~GaD-~~~~~~hK~l~~P~g~Ggp~~G 285 (481)
T PRK04366 217 PN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGK-AR------PGDMGFD-VVHLNLHKTFSTPHGGGGPGSG 285 (481)
T ss_pred CC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhccc-CC------ccccCCC-EEEEechhhcCCCCCCCCCCee
Confidence 87 99954 4579999999999999999999974221110 00 1122223 4578888988754 44566
Q ss_pred eEEEE
Q 023599 274 ALSVV 278 (280)
Q Consensus 274 ~~v~~ 278 (280)
++.+.
T Consensus 286 ~l~~~ 290 (481)
T PRK04366 286 PVGVK 290 (481)
T ss_pred eeeeh
Confidence 66553
No 224
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.60 E-value=8.3e-14 Score=126.80 Aligned_cols=212 Identities=10% Similarity=0.055 Sum_probs=126.5
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+|+..|......|+ -.+...++..+++.+ -.....+.......+|.+.++++. + .+.+++ +++
T Consensus 39 ~g~~~lD~~~~~~~~~~Gh-~~~~i~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~S 106 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQGH-CHPKILAAMVEQAGR-LTLTSRAFRNDQLAPLYEELAALT-G-------SHKVLP--MNS 106 (401)
T ss_pred CCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhh-ccccccccCCHHHHHHHHHHHhhC-C-------CCEEEE--eCC
Confidence 4567888877642111111 133344444444441 111111122233455677777653 1 146666 999
Q ss_pred chhHHHHHHHHHHhh-----c--CC-CEEEEeCCCCCChHHHHHHcCC-------------eeeEEEeecCCCCCcCHHH
Q 023599 120 GSGSLRIGADFLAKH-----Y--YQ-HTVYLSQPTYGNHPNFFAAAGL-------------AMKTYHYYDPKTNGLDFQG 178 (280)
Q Consensus 120 ~~~al~~~~~~~~~~-----~--~G-d~Vli~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~ 178 (280)
|++|++++..+.... . +| ++|++..-+|.+....+...+. .+..++. .|++.
T Consensus 107 Gs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 179 (401)
T PRK00854 107 GAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEA 179 (401)
T ss_pred cHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHH
Confidence 999999994333211 1 24 6788888788665333322221 1222221 47899
Q ss_pred HHHHHhcCCCCcEEEEecCCCCCCCCCCCH-HHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEE
Q 023599 179 MLQDLGAAPSGAIVLLQASGHNPTGIDPTA-QQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLV 257 (280)
Q Consensus 179 l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~-~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~ 257 (280)
+++.+.+++ ++|++++|+||||.+++. +.+++|.++|++||+++|+||+|..+...+. ... ....+....+++
T Consensus 180 le~~i~~~~---~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~--~~~-~~~~g~~~D~~~ 253 (401)
T PRK00854 180 LEAAITPNT---VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK--LLA-EEHEGIEADVTL 253 (401)
T ss_pred HHHHhCCCe---EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch--HhH-HhhcCCCCCEEE
Confidence 999886543 488899999999999984 4599999999999999999999987755321 111 111122223443
Q ss_pred EecccccccccccccceEEEEc
Q 023599 258 AQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 258 ~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
+||.++...+|+||++...
T Consensus 254 ---~~K~l~gg~~~ig~v~~~~ 272 (401)
T PRK00854 254 ---IGKALSGGFYPVSAVLSNS 272 (401)
T ss_pred ---ecccccCCccCeEEEEEcH
Confidence 3799974447999998753
No 225
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.60 E-value=4.1e-14 Score=126.36 Aligned_cols=164 Identities=16% Similarity=0.052 Sum_probs=120.5
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHHHHHcCCee
Q 023599 83 LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNFFAAAGLAM 161 (280)
Q Consensus 83 ~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~~~~~G~~~ 161 (280)
.......+|++++++++.. +++++ ++||++|+.++ +..+ +.+||+|+++.++|..+...+...|+++
T Consensus 15 ~~~~~~~~~~~~la~~~~~--------~~~~~--~~sgt~al~~~--l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~ 82 (352)
T cd00616 15 TLGPKVREFEKAFAEYLGV--------KYAVA--VSSGTAALHLA--LRALGIGPGDEVIVPSFTFVATANAILLLGATP 82 (352)
T ss_pred cCCHHHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeE
Confidence 3344678999999999631 44555 88999999999 6666 5799999999999999988899999999
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
+.++. +++++.+|++.+++.+.++++ ++++ .||+|...+ +++|.++|+++++++|+|+++.........
T Consensus 83 ~~~~~-~~~~~~~d~~~l~~~i~~~~~---~v~~---~~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~~~- 151 (352)
T cd00616 83 VFVDI-DPDTYNIDPELIEAAITPRTK---AIIP---VHLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYKGR- 151 (352)
T ss_pred EEEec-CCCcCCcCHHHHHHhcCcCCe---EEEE---ECCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeECCE-
Confidence 99998 454678999999998865433 5665 358998765 566788899999999999998754321110
Q ss_pred hhHHHHhhhcCCeEEEEeccc--ccccccccccceEEEE
Q 023599 242 ALPVRMFVADGGECLVAQSYS--KTMGLYGERVGALSVV 278 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RvG~~v~~ 278 (280)
.+ +.. .-+.+.||+ |.+ ++-+.|++++.
T Consensus 152 -----~~-~~~-~d~~~~S~~~~K~~--~~~~gg~~~~~ 181 (352)
T cd00616 152 -----KV-GTF-GDAGAFSFHPTKNL--TTGEGGAVVTN 181 (352)
T ss_pred -----Ec-ccC-cceeEEcCCCCCCC--cccCceEEEEC
Confidence 01 110 124566766 877 44567877764
No 226
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=3e-14 Score=130.29 Aligned_cols=158 Identities=15% Similarity=0.106 Sum_probs=117.9
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH----HHHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF----FAAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~----~~~~G~~~~ 162 (280)
....|++.++++... +..++ +++|++|+.++ +.+++.+||+|+++...|...... +...|++++
T Consensus 70 ~~~~Le~~lA~l~g~--------~~av~--~sSG~aAi~~a--l~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~ 137 (436)
T PRK07812 70 TQDVVEQRIAALEGG--------VAALL--LASGQAAETFA--ILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVS 137 (436)
T ss_pred hHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEE
Confidence 356788888887532 33444 88899999999 888899999999999888775543 334677777
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.++- . .|++.++++++++++ +|++.+|+||+|.+.+ +++|.++|+++|+++|+|+++..-...
T Consensus 138 ~vdd--~----~d~e~l~~ai~~~tk---lV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~~----- 200 (436)
T PRK07812 138 FVED--P----DDLDAWRAAVRPNTK---AFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYLI----- 200 (436)
T ss_pred EECC--C----CCHHHHHHhCCCCCe---EEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC-----
Confidence 6641 2 389999998876554 8889999999998886 556688999999999999987642221
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+ +.+.+++ +.|++|.+|.+|--+|++++.
T Consensus 201 ---~pl-~~GaDiv-v~S~tK~lgg~G~~i~G~vv~ 231 (436)
T PRK07812 201 ---RPL-EHGADIV-VHSATKYLGGHGTAIAGVIVD 231 (436)
T ss_pred ---Cch-hcCCCEE-EEecccccCCCCCeEEEEEEc
Confidence 111 2334444 699999998888878887774
No 227
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.58 E-value=2.1e-13 Score=124.35 Aligned_cols=217 Identities=12% Similarity=0.063 Sum_probs=128.8
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+|+..|...+.-|+. .++.+++..+++.+-......|. .....+|.+.++++. . .+.+.+ +++
T Consensus 37 dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~la~~l~~~~----~----~~~v~~--~~s 104 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGNGYT-NEPVLRLAKKLIDAT----F----ADRVFF--CNS 104 (406)
T ss_pred CCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccCccC-CHHHHHHHHHHHhhC----C----CCeEEE--cCC
Confidence 45678999776422223443 33444444444441001111121 112234555555542 1 267777 999
Q ss_pred chhHHHHHHHHHHhh------cCCCEEEEeCCCCCChHHHHHHcCCeee----EEEeecC-C-CCCcCHHHHHHHHhcCC
Q 023599 120 GSGSLRIGADFLAKH------YYQHTVYLSQPTYGNHPNFFAAAGLAMK----TYHYYDP-K-TNGLDFQGMLQDLGAAP 187 (280)
Q Consensus 120 ~~~al~~~~~~~~~~------~~Gd~Vli~~P~y~~~~~~~~~~G~~~~----~v~~~~~-~-~~~~d~~~l~~~~~~~~ 187 (280)
|++|++.+..+.... ....+|+..+.+|.+........+.... +.++... . -...|++.+++.+.++
T Consensus 105 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~- 183 (406)
T PRK12381 105 GAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQ- 183 (406)
T ss_pred cHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCC-
Confidence 999999995443222 1346899999999877544333222110 0011000 0 0124788999888643
Q ss_pred CCcEEEEecCCCCCCCCCC--CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccc
Q 023599 188 SGAIVLLQASGHNPTGIDP--TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTM 265 (280)
Q Consensus 188 ~~~~~v~~~~p~NPTG~~~--~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 265 (280)
..++++ +|.||+|-++ +.+.+++|.++|++||+++|+||+|..+.... ...+.. ..+.... +.+|||.+
T Consensus 184 --~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G--~~~~~~-~~~v~pD---i~t~sK~l 254 (406)
T PRK12381 184 --TCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG--ELYAYM-HYGVTPD---VLTTAKAL 254 (406)
T ss_pred --eeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc--chhhhH-hhCCCCC---EEEehhhh
Confidence 235554 6999999765 68999999999999999999999998885542 121111 1122223 35999999
Q ss_pred cccccccceEEEEc
Q 023599 266 GLYGERVGALSVVR 279 (280)
Q Consensus 266 ~~~G~RvG~~v~~~ 279 (280)
+ +|+|+||+++..
T Consensus 255 ~-gG~~ig~~~~~~ 267 (406)
T PRK12381 255 G-GGFPIGAMLTTE 267 (406)
T ss_pred h-CCCceEEEEEcH
Confidence 8 899999998753
No 228
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.58 E-value=1.2e-13 Score=124.49 Aligned_cols=207 Identities=13% Similarity=0.007 Sum_probs=127.0
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccC----CCCCCCC----CCCCCHHHHHHHHHHHhCCCCccccCCCeE
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDL----SADKEYL----PITGLPEFNKLSAKLIFGADSPAIKENRVS 113 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~y~----~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~ 113 (280)
...++|+..+|++....+.+.+.+..+.+....+. ....+.. ...-..++++.+|+++... +.++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-------~~l~ 76 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-------EAFI 76 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-------eEEE
Confidence 46899999999888877777777766666553110 0011111 2223567899999986431 2233
Q ss_pred EeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC---CCCc
Q 023599 114 TVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA---PSGA 190 (280)
Q Consensus 114 ~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~---~~~~ 190 (280)
+ ++|. .++..+ +..+..+||.|++..-.+......++......+.++ ..|++.+++.+.+. +++.
T Consensus 77 ~--~sG~-~a~~~~--~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 77 V--PSGY-MANLGL--CAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred E--CChH-HHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence 3 5555 444443 333445777777665555444444544433333332 25899999988743 1234
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccccccc
Q 023599 191 IVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGE 270 (280)
Q Consensus 191 ~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 270 (280)
+++++++++|+||.+.+ +++|.++|+++|+++++|++|....+...... ........+..+.+.||||.+|..|.
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g--~~~~~~~~~~~~~~~tlsK~~g~~G~ 219 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKG--FCHSLGYENFYAVLVTYSKALGSMGA 219 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCc--hHHhhCCCCCcEEEEechhhhhcCce
Confidence 57778999999999998 55678889999999999999986544211110 01111111223678999999997775
Q ss_pred cc
Q 023599 271 RV 272 (280)
Q Consensus 271 Rv 272 (280)
++
T Consensus 220 ~v 221 (370)
T PRK05937 220 AL 221 (370)
T ss_pred EE
Confidence 53
No 229
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.56 E-value=5.7e-13 Score=120.29 Aligned_cols=212 Identities=12% Similarity=0.098 Sum_probs=131.1
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|.-. ......++.+++..+.+. .. . +.+..-...+++.+++.+.+.. ...+++ +++
T Consensus 27 dg~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~--~~--~-~~~~~~~~~~~~~la~~l~~~~-----~~~~~~--~~S 92 (375)
T PRK04260 27 DGKKYLDFSSGIGV--TNLGFHPQVQQALQKQAG--LI--W-HSPNLYLNSLQEEVAQKLIGDK-----DYLAFF--CNS 92 (375)
T ss_pred CCCEEEECCCCccc--ccCCCCHHHHHHHHHHHH--hc--C-cccCccCCHHHHHHHHHHhcCc-----CCEEEE--cCc
Confidence 34578999776310 122233344444444443 11 1 1222234678899998864421 122345 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChH-HHHHHcCCe---------eeEEEeecCCCCCcCHHHHHHHHhcCCCC
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHP-NFFAAAGLA---------MKTYHYYDPKTNGLDFQGMLQDLGAAPSG 189 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~-~~~~~~G~~---------~~~v~~~~~~~~~~d~~~l~~~~~~~~~~ 189 (280)
|++|+..+..+......+++|++.+.+|.+.. ..+...|.+ +..++.. ...|++.+++.+.++
T Consensus 93 GseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~dl~~l~~~l~~~--- 165 (375)
T PRK04260 93 GAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA----IFNDLNSVKALVNKN--- 165 (375)
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe----CCCCHHHHHHhcCCC---
Confidence 99999988444333345678999999987643 222222221 1111110 013789999877543
Q ss_pred cEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccccc
Q 023599 190 AIVLLQASGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLY 268 (280)
Q Consensus 190 ~~~v~~~~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 268 (280)
..++++.+++|++|...+ .+.++++.++|+++|+++|+||+|..+.... ..++. ...+..++ +.||||.++ +
T Consensus 166 ~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g--~~~~~-~~~~~~pd---i~t~sK~l~-~ 238 (375)
T PRK04260 166 TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG--KLYAF-EHYGIEPD---IFTLAKGLA-N 238 (375)
T ss_pred eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--chhhh-HhhCCCCC---EEEeccccc-C
Confidence 358888999999998754 5679999999999999999999998875432 11111 11122234 348999998 8
Q ss_pred ccccceEEEEc
Q 023599 269 GERVGALSVVR 279 (280)
Q Consensus 269 G~RvG~~v~~~ 279 (280)
|+|+||+++..
T Consensus 239 G~~ig~~~~~~ 249 (375)
T PRK04260 239 GVPVGAMLAKS 249 (375)
T ss_pred CcceEEEEEcH
Confidence 99999999863
No 230
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.56 E-value=7.4e-14 Score=125.53 Aligned_cols=154 Identities=18% Similarity=0.200 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH----HcCCeeeEE
Q 023599 89 PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA----AAGLAMKTY 164 (280)
Q Consensus 89 ~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~----~~G~~~~~v 164 (280)
..|.+.+++.-.+ +.+++ +++|++|+..+ +++++++||+|+++...|.+....++ ..|+++.++
T Consensus 58 ~~le~~la~Le~g--------~~a~~--~~SGmaAi~~~--l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~ 125 (386)
T PF01053_consen 58 RALEQRLAALEGG--------EDALL--FSSGMAAISAA--LLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFV 125 (386)
T ss_dssp HHHHHHHHHHHT---------SEEEE--ESSHHHHHHHH--HHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEE
T ss_pred HHHHHHHHHhhcc--------cceee--ccchHHHHHHH--HHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEe
Confidence 4577777776322 45566 99999999999 88999999999999999988876666 468888777
Q ss_pred EeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCC-ceeEEcccCCCcccCcCCChh
Q 023599 165 HYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKR-LLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 165 ~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~-~~ii~De~y~~~~~~~~~~~~ 243 (280)
+. -|.+.++++++++++ +|++.+|.||+. ...++++|+++|+++| +++++|+.+.....-
T Consensus 126 d~-------~d~~~l~~~l~~~t~---~v~~EspsNP~l---~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~------ 186 (386)
T PF01053_consen 126 DP-------TDLEALEAALRPNTK---LVFLESPSNPTL---EVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ------ 186 (386)
T ss_dssp ST-------TSHHHHHHHHCTTEE---EEEEESSBTTTT---B---HHHHHHHHHHTTT-EEEEECTTTHTTTC------
T ss_pred Cc-------hhHHHHHhhccccce---EEEEEcCCCccc---ccccHHHHHHHHHHhCCceEEeeccccceeee------
Confidence 64 489999999987655 999999999995 5557888899999998 999999999665432
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
.. .+.+.. |++.|.||.++-+|--+|=+++
T Consensus 187 --~p-L~~GaD-ivv~S~TKyl~Ghsdv~~G~vv 216 (386)
T PF01053_consen 187 --NP-LELGAD-IVVHSATKYLSGHSDVMGGAVV 216 (386)
T ss_dssp ---G-GGGT-S-EEEEETTTTTTTSSSE-EEEEE
T ss_pred --cc-CcCCce-EEEeeccccccCCcceeeEEEE
Confidence 11 122222 6699999999756655554444
No 231
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.54 E-value=1.9e-13 Score=123.14 Aligned_cols=154 Identities=14% Similarity=0.074 Sum_probs=115.8
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH----HHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF----AAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~----~~~G~~~~ 162 (280)
....|.+.+++.- +. +..++ +++|++|+.++ +++++.+||+|++++..|.+....+ +..|+++.
T Consensus 63 t~~~le~~la~LE-g~-------~~a~~--~~SGmaAi~~~--~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~ 130 (395)
T PRK08114 63 THFSLQEAMCELE-GG-------AGCAL--YPCGAAAVANA--ILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTT 130 (395)
T ss_pred hHHHHHHHHHHHh-CC-------CeEEE--EhHHHHHHHHH--HHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEE
Confidence 3456778888762 11 44455 88899999999 8888999999999999997776654 56798888
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhC--CceeEEcccCCCcccCcCC
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLK--RLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~--~~~ii~De~y~~~~~~~~~ 240 (280)
+++. .|.+.++++++++++ +|++.+|+||||.+.+ +++|+++|+++ ++++++|.++..-..-
T Consensus 131 ~vd~-------~d~~~l~~~l~~~Tr---lV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~~--- 194 (395)
T PRK08114 131 WFDP-------LIGADIAKLIQPNTK---VVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVLF--- 194 (395)
T ss_pred EECC-------CCHHHHHHhcCCCce---EEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccccc---
Confidence 8764 367889999976654 9999999999998775 67778899997 4999999999653331
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccc-cccceE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGAL 275 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~ 275 (280)
...+.+.. +++.|.+|.++-+| +-.|.+
T Consensus 195 ------~pl~~GaD-ivv~S~tKyl~Ghsdv~~G~v 223 (395)
T PRK08114 195 ------KALDFGID-ISIQAGTKYLVGHSDAMIGTA 223 (395)
T ss_pred ------CHHHcCCc-EEEEcCcccccCCCcceeEEE
Confidence 01122223 66999999887676 566643
No 232
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.53 E-value=4e-13 Score=119.81 Aligned_cols=158 Identities=16% Similarity=0.179 Sum_probs=120.1
Q ss_pred CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH----HHcCCe
Q 023599 85 ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF----AAAGLA 160 (280)
Q Consensus 85 ~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~----~~~G~~ 160 (280)
.+....|.++++.+-. .++.+. +++|++|+..+ ++.++++||+|++++..|++....+ +.+|++
T Consensus 62 nPT~~~lE~~~a~LEg--------~~~~~a--fsSGmaAI~~~--~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~ 129 (396)
T COG0626 62 NPTRDALEEALAELEG--------GEDAFA--FSSGMAAISTA--LLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVE 129 (396)
T ss_pred CccHHHHHHHHHHhhC--------CCcEEE--ecCcHHHHHHH--HHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeE
Confidence 4456678888888731 144555 99999999999 8999999999999999998876555 467888
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGA-APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
+.+++. .+.+.+++++.+ +++ +|++.+|+||| +...++.+|+++|+++|+++|+|+.|..-++..
T Consensus 130 ~~~~d~-------~~~~~~~~~~~~~~tk---~v~lEtPsNP~---l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~- 195 (396)
T COG0626 130 VTFVDP-------GDDEALEAAIKEPNTK---LVFLETPSNPL---LEVPDIPAIARLAKAYGALVVVDNTFATPVLQR- 195 (396)
T ss_pred EEEECC-------CChHHHHHHhcccCce---EEEEeCCCCcc---cccccHHHHHHHHHhcCCEEEEECCcccccccC-
Confidence 877764 245666666664 555 99999999999 566678899999999999999999998876631
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
. .+.+.. |++.|.||.++-++-=+|=+++
T Consensus 196 -------P-L~~GaD-IVvhSaTKyl~GHsDvl~G~v~ 224 (396)
T COG0626 196 -------P-LELGAD-IVVHSATKYLGGHSDVLGGVVL 224 (396)
T ss_pred -------h-hhcCCC-EEEEeccccccCCcceeeeEEe
Confidence 1 123322 6799999999877666655444
No 233
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.53 E-value=1.5e-12 Score=118.49 Aligned_cols=159 Identities=12% Similarity=0.038 Sum_probs=100.9
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh--------cCCCEEEEeCCCCCChHHHHHHc-CCeee---EEEeecCC---CCCc
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH--------YYQHTVYLSQPTYGNHPNFFAAA-GLAMK---TYHYYDPK---TNGL 174 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~--------~~Gd~Vli~~P~y~~~~~~~~~~-G~~~~---~v~~~~~~---~~~~ 174 (280)
+.+++ +++|++|.+.+..+.... ..+++|++.+-+|.+........ +.... +.+. .+. -...
T Consensus 89 ~~~~~--~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 165 (400)
T PTZ00125 89 DKVLP--MNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPF-VPGFELVDYN 165 (400)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCC-CCCceEeCCC
Confidence 56666 899999999994332210 13478888888887654333222 21100 0011 000 0113
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCC
Q 023599 175 DFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGG 253 (280)
Q Consensus 175 d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 253 (280)
|++.+++.+.. .+..+|++..++||||.+++ .+.+++|.++|++||+++|+||+|..+..... ... ....+...
T Consensus 166 d~~~le~~l~~--~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~--~~~-~~~~~~~p 240 (400)
T PTZ00125 166 DVEALEKLLQD--PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK--LLA-HDHEGVKP 240 (400)
T ss_pred CHHHHHHHhCC--CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hhH-HHhcCCCC
Confidence 89999998862 23457788888999999996 45599999999999999999999987755321 111 11112222
Q ss_pred eEEEEecccccccccccccceEEEEc
Q 023599 254 ECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 254 ~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.++ ++||.++..++|+||+++..
T Consensus 241 d~~---~~sK~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 241 DIV---LLGKALSGGLYPISAVLAND 263 (400)
T ss_pred CEE---EEcccccCCCcCcEEEEEcH
Confidence 443 47899985446999998753
No 234
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.52 E-value=9e-13 Score=116.71 Aligned_cols=207 Identities=14% Similarity=0.091 Sum_probs=145.8
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCC--CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLP--ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~--~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
+.+.+.|..+. +.+-.+.+.+++.........++... .|.. ..+.+..|+.+|+++.... .+|++ |.
T Consensus 41 ~~~~vyld~~a--t~p~~~~Vldam~~~~~~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~------~dIiF--ts 109 (428)
T KOG1549|consen 41 GTRPVYLDNQA--TGPMDPRVLDAMLPYLLEYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADP------SDIVF--TS 109 (428)
T ss_pred CCccEEEecCc--CCCCCHHHHHHHHHHHHHhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCC------CcEEE--eC
Confidence 34566666665 22222334444444444444333322 2333 4447889999999986553 55888 99
Q ss_pred cchhHHHHHHHHHHhhc-CCC----EEEEeCCCCCChHHHHH---HcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCc
Q 023599 119 SGSGSLRIGADFLAKHY-YQH----TVYLSQPTYGNHPNFFA---AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGA 190 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~-~Gd----~Vli~~P~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 190 (280)
|+|++++++ +..... .+| .|++.+-.|+.....++ ..|++++++|. + +++-.|.+.+++.++++++
T Consensus 110 ~ATEs~Nlv--l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv-~-~~~~~d~~~~~~~i~~~T~-- 183 (428)
T KOG1549|consen 110 GATESNNLV--LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPV-E-DSGLVDISKLREAIRSKTR-- 183 (428)
T ss_pred CchHHHHHH--HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEecc-C-ccccccHHHHHHhcCCCce--
Confidence 999999999 666543 666 89999888877655544 56999999999 3 5667899999999998766
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccccccc
Q 023599 191 IVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGE 270 (280)
Q Consensus 191 ~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 270 (280)
++.+..-||-+|++++. ++|+++|+++++.+++|.+.+--... -.+.+.+.. ....|.-|.||.+|
T Consensus 184 -lv~I~~Vnn~~gv~~Pv---~EI~~icr~~~v~v~~DaAQavG~i~--------vDV~eln~D-~~s~s~HK~ygp~~- 249 (428)
T KOG1549|consen 184 -LVSIMHVNNEIGVLQPV---KEIVKICREEGVQVHVDAAQAVGKIP--------VDVQELNAD-FLSISAHKIYGPPG- 249 (428)
T ss_pred -EEEEEecccCccccccH---HHHHHHhCcCCcEEEeehhhhcCCcc--------ccHHHcCch-heeeecccccCCCc-
Confidence 88888899999999985 56688999999999999988554332 112222222 34667889999999
Q ss_pred ccceEEEEc
Q 023599 271 RVGALSVVR 279 (280)
Q Consensus 271 RvG~~v~~~ 279 (280)
+|++.+..
T Consensus 250 -iGaLYvr~ 257 (428)
T KOG1549|consen 250 -IGALYVRR 257 (428)
T ss_pred -ceEEEEcc
Confidence 99988763
No 235
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.51 E-value=5.9e-13 Score=121.83 Aligned_cols=156 Identities=14% Similarity=0.118 Sum_probs=115.8
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChH----HHHHHcCCeeeE
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHP----NFFAAAGLAMKT 163 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~----~~~~~~G~~~~~ 163 (280)
...|++.++++... +..++ +++|+.|+.++ +++++.+||+|+++...|.... ..+...|+++++
T Consensus 71 ~~~le~~la~l~g~--------~~~v~--fsSG~~Ai~~a--l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~ 138 (437)
T PRK05613 71 VEALENRIASLEGG--------VHAVA--FASGQAAETAA--ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTF 138 (437)
T ss_pred HHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH--HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEE
Confidence 56788888888532 22333 67777999888 7777899999999999998764 344678999988
Q ss_pred EEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChh
Q 023599 164 YHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 164 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 243 (280)
++. + .|++.++++++++++ +|++.++.||+|.+.+ +++|+++|+++|+++|+|.++...... .
T Consensus 139 vd~--~----~d~e~l~~~l~~~tk---~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~~---~-- 201 (437)
T PRK05613 139 VEN--P----DDPESWQAAVQPNTK---AFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAALV---R-- 201 (437)
T ss_pred ECC--C----CCHHHHHHhCCccCe---EEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccccc---C--
Confidence 872 2 278999999987654 6777889999997776 667788999999999999998543221 0
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
+ . +.+. =+++.|++|.++-+|.-+|-+++
T Consensus 202 p-~---~~Ga-Divv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 202 P-L---ELGA-DVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred h-H---HhCC-CEEEeeccceecCCCcceeEEEE
Confidence 0 1 2222 36688999999877877777666
No 236
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=1.1e-12 Score=118.70 Aligned_cols=163 Identities=15% Similarity=0.115 Sum_probs=123.6
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh---hcCCCEEEEeCCCCCCh----HHHHHHcCC
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK---HYYQHTVYLSQPTYGNH----PNFFAAAGL 159 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~---~~~Gd~Vli~~P~y~~~----~~~~~~~G~ 159 (280)
-+++.|+.+++++.... .++|++ |.|+|++++++ ..++ +.+||+|++.+-.|+.. ....+..|+
T Consensus 67 ~~e~aRe~va~~~~a~~-----~~eIvf--t~~tT~aln~v--a~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga 137 (405)
T COG0520 67 LYEAAREAVARFLNADS-----SDEIVF--TRGTTEALNLV--ARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGA 137 (405)
T ss_pred HHHHHHHHHHHHhCCCC-----CCeEEE--eCChhHHHHHH--HHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCc
Confidence 35678999999975431 378888 99999999999 4554 68999999999887554 444456799
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
+++.+|+ + +++.++.+.+++.+.++++ +|.++.-+|.||++.+ +++|+++|+++|+++++|.+.+--....+
T Consensus 138 ~v~~i~~-~-~~g~~~~~~~~~~i~~~Tk---lvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h~~id 209 (405)
T COG0520 138 KVRVIPL-D-DDGLLDLDALEKLITPKTK---LVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAAGHLPID 209 (405)
T ss_pred EEEEEec-C-CCCCcCHHHHHHhcCCCce---EEEEECccccccccch---HHHHHHHHHHcCCEEEEECccccCccCCC
Confidence 9999999 4 5678999999998887766 9999999999999876 67779999999999999998755544311
Q ss_pred CChhHHHHhhhcCCeEEEEecccc-cccccccccceEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSK-TMGLYGERVGALSV 277 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK-~~~~~G~RvG~~v~ 277 (280)
+.+.+ -=.+..|--| .+| | --+|.+.+
T Consensus 210 --------v~~l~-~Df~afsgHKwl~g-P-~GiGvLy~ 237 (405)
T COG0520 210 --------VQELG-CDFLAFSGHKWLLG-P-TGIGVLYV 237 (405)
T ss_pred --------chhcC-CCEEEEcccccccC-C-CceEEEEE
Confidence 11111 2256888899 666 4 23555544
No 237
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.50 E-value=7.8e-13 Score=114.19 Aligned_cols=158 Identities=16% Similarity=0.184 Sum_probs=126.1
Q ss_pred CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH----HHcCCe
Q 023599 85 ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF----AAAGLA 160 (280)
Q Consensus 85 ~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~----~~~G~~ 160 (280)
.+....|.+.++.. + ..+..+++.+|+.|+..+ ++++..+||.|+-..--|++....+ +.+|++
T Consensus 61 NPT~~vlE~RiAaL---E-------GG~aa~a~aSG~AA~~~a--i~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~ 128 (426)
T COG2873 61 NPTTDVLEERIAAL---E-------GGVAALAVASGQAAITYA--ILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIE 128 (426)
T ss_pred CchHHHHHHHHHHh---h-------cchhhhhhccchHHHHHH--HHHhccCCCeeEeeccccCchHHHHHHHHHhcCcE
Confidence 44566788888887 2 222334499999999999 9999999999999999898865554 578999
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
+.+++- .|++.++++++++++ +|+..+-.||-+.+++ +++|.++|+++++.+|+|..+..-+.
T Consensus 129 v~fvd~-------~d~~~~~~aI~~nTk---avf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl---- 191 (426)
T COG2873 129 VRFVDP-------DDPENFEAAIDENTK---AVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYL---- 191 (426)
T ss_pred EEEeCC-------CCHHHHHHHhCcccc---eEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCccee----
Confidence 998875 379999999999987 8999999999988775 67889999999999999999866322
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
....+.+.+ |++.|+||..|-.|--+|=+++
T Consensus 192 -----~rP~~hGAD-IVvHS~TK~igGhGt~iGG~iV 222 (426)
T COG2873 192 -----CRPIEHGAD-IVVHSATKYIGGHGTAIGGVIV 222 (426)
T ss_pred -----cchhhcCCC-EEEEeecccccCCccccceEEE
Confidence 111234444 5599999999999999998776
No 238
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.48 E-value=1e-12 Score=118.06 Aligned_cols=159 Identities=19% Similarity=0.145 Sum_probs=110.1
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEE
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYH 165 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~ 165 (280)
-...|.+.+++++.. ++++. +++|+.|+.++ +.++ +.+||+|++|..+|......+...|++++.++
T Consensus 26 ~~~~fE~~~a~~~g~--------~~~~~--~~sgt~Al~~a--l~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~D 93 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGV--------KYAVA--VSSGTSALHLA--LRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVD 93 (363)
T ss_dssp HHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHH--HHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-
T ss_pred HHHHHHHHHHHHhCC--------CeEEE--eCChhHHHHHH--HHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEe
Confidence 367899999999742 55565 99999999999 5554 35899999999999999999999999999999
Q ss_pred eecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHH
Q 023599 166 YYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPV 245 (280)
Q Consensus 166 ~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 245 (280)
+ +++++.+|++.++++++++++ +|++ .+.-|... ++.+|.++|+++|++||+|.+......-..
T Consensus 94 i-~~~~~~id~~~~~~~i~~~t~---ai~~---~h~~G~~~---d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g------ 157 (363)
T PF01041_consen 94 I-DPETLNIDPEALEKAITPKTK---AILV---VHLFGNPA---DMDAIRAIARKHGIPLIEDAAQAFGARYKG------ 157 (363)
T ss_dssp B-ETTTSSB-HHHHHHHHHTTEE---EEEE---E-GGGB------HHHHHHHHHHTT-EEEEE-TTTTT-EETT------
T ss_pred c-cCCcCCcCHHHHHHHhccCcc---EEEE---ecCCCCcc---cHHHHHHHHHHcCCcEEEccccccCceeCC------
Confidence 9 688999999999999998763 4443 22334322 688999999999999999999877654111
Q ss_pred HHhhhcCCeEEEEecc--cccccccccccceEEE
Q 023599 246 RMFVADGGECLVAQSY--SKTMGLYGERVGALSV 277 (280)
Q Consensus 246 ~~~~~~~~~~i~~~S~--SK~~~~~G~RvG~~v~ 277 (280)
+.+-..++ +.+.|| +|.+. +|. -|.+++
T Consensus 158 ~~~G~~gd--~~~fSf~~~K~i~-~ge-GG~v~~ 187 (363)
T PF01041_consen 158 RPVGSFGD--IAIFSFHPTKIIT-TGE-GGAVVT 187 (363)
T ss_dssp EETTSSSS--EEEEESSTTSSS--SSS--EEEEE
T ss_pred EeccCCCC--ceEecCCCCCCCc-CCC-CeeEEe
Confidence 11212233 445555 78884 443 366655
No 239
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.47 E-value=1.1e-11 Score=113.21 Aligned_cols=207 Identities=16% Similarity=0.070 Sum_probs=128.7
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCC----HHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGL----PEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~----~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
...++|+..+| -++..-+...+++.+.+.+-......-.-..|. .+|.+.+|+|+.. +..++ .
T Consensus 102 r~~l~FsSndY---LGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~--------e~all--~ 168 (476)
T PLN02955 102 KKLLLFSGNDY---LGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK--------EDCLV--C 168 (476)
T ss_pred ceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC--------CcEEE--E
Confidence 36799998888 444444444444444443101000111112344 6799999999632 55565 7
Q ss_pred ccchhHHHHHHHHHHhh--------------cCCCEEEEeCCCCCChHHHHHHc----CCeeeEEEeecCCCCCcCHHHH
Q 023599 118 LSGSGSLRIGADFLAKH--------------YYQHTVYLSQPTYGNHPNFFAAA----GLAMKTYHYYDPKTNGLDFQGM 179 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~--------------~~Gd~Vli~~P~y~~~~~~~~~~----G~~~~~v~~~~~~~~~~d~~~l 179 (280)
++|..|...+ +.++. ..+|.|+.-.-.+.....-++.. ++++..++. .|++.|
T Consensus 169 sSGy~AN~~~--i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~L 239 (476)
T PLN02955 169 PTGFAANMAA--MVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHL 239 (476)
T ss_pred CChHHHHHHH--HHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHH
Confidence 7777777766 44431 23445555444444444455544 355555543 489999
Q ss_pred HHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC-CChhHHHHhhhcCCeEEEE
Q 023599 180 LQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD-ADALPVRMFVADGGECLVA 258 (280)
Q Consensus 180 ~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~~i~~ 258 (280)
++.++..+.+.++|+...--++.|.+.+ +++|.++|++||.++|+||+|..+..... .... ..+.-..+..|++
T Consensus 240 e~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~--e~~g~~~di~ii~ 314 (476)
T PLN02955 240 NSLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVA--EEFNCEADVDLCV 314 (476)
T ss_pred HHHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHH--HHhCCCCCCcEEE
Confidence 9998765444567777777899999888 56667888999999999999998887531 1221 1111123577999
Q ss_pred ecccccccccccccceEEEE
Q 023599 259 QSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 259 ~S~SK~~~~~G~RvG~~v~~ 278 (280)
+||||.+| .+-||+++.
T Consensus 315 ~TLsKA~G---~~GGfi~gs 331 (476)
T PLN02955 315 GTLSKAAG---CHGGFIACS 331 (476)
T ss_pred EeCccchh---ccCceeecH
Confidence 99999975 456887664
No 240
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.47 E-value=8.3e-12 Score=114.27 Aligned_cols=159 Identities=11% Similarity=0.150 Sum_probs=104.0
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH-cCC-------------eeeEEEeecCCCCCc-
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA-AGL-------------AMKTYHYYDPKTNGL- 174 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~-~G~-------------~~~~v~~~~~~~~~~- 174 (280)
+.+.+ +++|++|.+.+..+........+|+...-+|.+....... .|. .+..+|..+.. .+.
T Consensus 102 ~~~~f--~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~ 178 (421)
T PRK09792 102 AKTAF--FTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGIS 178 (421)
T ss_pred ceEEE--eCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-cccc
Confidence 46666 8899999999955443322235788888888775332221 111 12223331111 112
Q ss_pred ---CHHHHHHHHhcC--CCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHh
Q 023599 175 ---DFQGMLQDLGAA--PSGAIVLLQASGHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMF 248 (280)
Q Consensus 175 ---d~~~l~~~~~~~--~~~~~~v~~~~p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 248 (280)
+++.+++.+.+. .++..++++..-++|+|..+ +.+.+++|.++|++|++++|+||++..|.... ...+...+
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G--~~~a~~~~ 256 (421)
T PRK09792 179 TQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG--KLFAMDHY 256 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC--chhHHHhc
Confidence 347788877631 23344556555689999876 89999999999999999999999999986642 22333333
Q ss_pred hhcCCeEEEEecccccccccccccceEEEE
Q 023599 249 VADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 249 ~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+.... +.+|||.++ +|+|+||+++.
T Consensus 257 -~~~pD---i~t~gK~l~-~G~pigav~~~ 281 (421)
T PRK09792 257 -ADKPD---LMTMAKSLA-GGMPLSGVVGN 281 (421)
T ss_pred -CCCCc---EEEeehhhc-CCCceEEEEEc
Confidence 21223 689999998 99999998874
No 241
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.46 E-value=4.5e-12 Score=112.44 Aligned_cols=128 Identities=17% Similarity=0.106 Sum_probs=103.5
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEE
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYH 165 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~ 165 (280)
-..+|.+++++|+.- .+.+. +++||.|+.++ +.++ +.|||+|+++.-+|....+.+...|+++++++
T Consensus 35 ~v~~FE~~~ae~~G~--------k~ava--~~sgT~AL~la--L~al~ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvD 102 (374)
T COG0399 35 FVRRFEQAFAEYLGV--------KYAVA--VSSGTAALHLA--LLALAIGPGDEVIVPSFTFVATANAVLLVGAKPVFVD 102 (374)
T ss_pred HHHHHHHHHHHHhCC--------CeEEE--ecChHHHHHHH--HHhcCCCCCCEEEecCCchHHHHHHHHHcCCeEEEEe
Confidence 367899999999633 33444 99999999999 5532 68999999999999999999999999999999
Q ss_pred eecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 166 YYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 166 ~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
+ |++++.+|.+.++++++++++ + ++.+--.-||. ++.+|.++|++||++||+|.+.+....
T Consensus 103 i-d~~T~nid~~~ie~aIt~~tK-A-IipVhl~G~~~-------dm~~i~~la~~~~l~vIEDaAqa~Ga~ 163 (374)
T COG0399 103 I-DPDTLNIDPDLIEAAITPRTK-A-IIPVHLAGQPC-------DMDAIMALAKRHGLPVIEDAAQAHGAT 163 (374)
T ss_pred c-CCcccCCCHHHHHHHcccCCe-E-EEEehhccCCC-------CHHHHHHHHHHcCCeEEEEcchhccCe
Confidence 9 788999999999999998854 2 33322233333 688889999999999999999866543
No 242
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.46 E-value=4.9e-12 Score=116.03 Aligned_cols=212 Identities=15% Similarity=0.084 Sum_probs=133.2
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|.....-|+ ..+..++++.+++. .. ...|.+..+..+|.+.+++.+- ..+.+.+ +++
T Consensus 48 dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~--~~-~~~~~~~~~~~~la~~L~~~~~-------~~~~v~~--~~s 114 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAE--KG-LSFGAPTELEVELAELVIELVP-------SIEMVRM--VNS 114 (426)
T ss_pred CCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHH--hC-CcCCCCCHHHHHHHHHHHHhCC-------CCCEEEE--ecC
Confidence 4678999998864222233 33344444445554 22 2335555566677777777641 1266777 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHc--------C-----Ceee-----EEEeecCCCCCcCHHHHHH
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAA--------G-----LAMK-----TYHYYDPKTNGLDFQGMLQ 181 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~--------G-----~~~~-----~v~~~~~~~~~~d~~~l~~ 181 (280)
|++|++.+..+......+++|+..+++|.++...+... + .... .+.. + ..|++.+++
T Consensus 115 GseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~d~~~l~~ 189 (426)
T PRK00062 115 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA--P---YNDLEAVEE 189 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc--C---CCCHHHHHH
Confidence 99999999443322334579999999999876333221 1 0000 0111 1 137889998
Q ss_pred HHhcCCCCcEEEEec-CCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEe
Q 023599 182 DLGAAPSGAIVLLQA-SGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQ 259 (280)
Q Consensus 182 ~~~~~~~~~~~v~~~-~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 259 (280)
.+.+...+..++++. .++| +|.+.+ .+.+++|.++|++|++++|+||+|..+..+. ... ....+..+. +.
T Consensus 190 ~i~~~~~~~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~---~~~-~~~~~~~pD---i~ 261 (426)
T PRK00062 190 LFEEYGDEIAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL---GGA-QGYYGVTPD---LT 261 (426)
T ss_pred HHHhCCCcEEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC---ccH-HHHhCCCcc---hH
Confidence 886543334444444 5555 787776 7889999999999999999999998874431 111 122222223 46
Q ss_pred cccccccccccccceEEEE
Q 023599 260 SYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 260 S~SK~~~~~G~RvG~~v~~ 278 (280)
+|||.++ .||++|++++.
T Consensus 262 ~~gK~l~-~G~p~ga~~~~ 279 (426)
T PRK00062 262 TLGKIIG-GGLPVGAFGGR 279 (426)
T ss_pred hhhhHhh-CCCcceeeeEH
Confidence 8999998 89999998764
No 243
>PLN00144 acetylornithine transaminase
Probab=99.44 E-value=7.1e-12 Score=113.34 Aligned_cols=217 Identities=14% Similarity=0.027 Sum_probs=122.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+|+..|.-...-|+- .++.++++.+++. .. .+ +.. ....+....+++.+..... .+.+.+ +++
T Consensus 13 dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~--~~-~~-~~~-~~~~~~~~~la~~l~~~~~----~~~v~f--~~s 80 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHG-DPDWVKAVAEQAG--TL-AH-VSN-VYHTIPQVELAKRLVASSF----ADRVFF--CNS 80 (382)
T ss_pred CCCEEEECCcCHHhccCCCC-CHHHHHHHHHHHH--hc-CC-ccc-cccCHHHHHHHHHHHhcCC----CCeEEE--eCC
Confidence 45678888776421112221 2334444444443 11 11 111 1112233445555433221 257777 999
Q ss_pred chhHHHHHHHHHHhhcC-------------CCEEEEeCCCCCChHHHHHHcCCee----eEEEeecCCC---CCcCHHHH
Q 023599 120 GSGSLRIGADFLAKHYY-------------QHTVYLSQPTYGNHPNFFAAAGLAM----KTYHYYDPKT---NGLDFQGM 179 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~-------------Gd~Vli~~P~y~~~~~~~~~~G~~~----~~v~~~~~~~---~~~d~~~l 179 (280)
|++|.+.+..+...... ..+|+...-+|.+............ .+.+. .+.. ...|++.+
T Consensus 81 GseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~d~~~l 159 (382)
T PLN00144 81 GTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPL-MPGVTFVEYGNLEAA 159 (382)
T ss_pred cHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCC-CCCeEEeCCCCHHHH
Confidence 99999998544332110 2478888888877643333221110 00111 0000 01268899
Q ss_pred HHHHhcCCCCcEEEEecCCCCCCCCCCCHHH--HHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEE
Q 023599 180 LQDLGAAPSGAIVLLQASGHNPTGIDPTAQQ--WEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLV 257 (280)
Q Consensus 180 ~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~--l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~ 257 (280)
++.+... +...+++-+. +|| |.+++.+. +++|.++|++||+++|+||+|..|..... ..+ ..+.+..+.
T Consensus 160 ~~~~~~~-~~aavi~eP~-q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~--~~~-~~~~~~~PD--- 230 (382)
T PLN00144 160 RKLIQKG-KTAAVFVEPV-QGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGY--LWA-HEAYGVEPD--- 230 (382)
T ss_pred HHhcCCC-CeEEEEEccc-cCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch--Hhh-hhhcCCCCC---
Confidence 9888533 2334555554 889 55566555 99999999999999999999998866421 111 112222223
Q ss_pred EecccccccccccccceEEEEc
Q 023599 258 AQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 258 ~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
+.+|||.++ +|+|+||+++..
T Consensus 231 i~t~sK~l~-~G~pig~v~~~~ 251 (382)
T PLN00144 231 IMTLAKPLA-GGLPIGAVLVTE 251 (382)
T ss_pred EEEeccccc-CCcceEEEEEcH
Confidence 889999998 899999999853
No 244
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.44 E-value=1.3e-11 Score=112.24 Aligned_cols=211 Identities=13% Similarity=0.132 Sum_probs=122.2
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|...+.-|+ -.++.+++..+++.+-......| +..-..+|.+.++++. . .+.+.+ +++
T Consensus 33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~L~~~~----~----~~~~~f--~~S 100 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGY-TNEPVLRLAKKLVDAT----F----ADKVFF--CNS 100 (397)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCC
Confidence 4567899987632122344 23444444444444100001111 1112234555555542 1 257777 999
Q ss_pred chhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHHH-HHcCCe------------eeEEEeecCCCCCcCHHHHH
Q 023599 120 GSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNFF-AAAGLA------------MKTYHYYDPKTNGLDFQGML 180 (280)
Q Consensus 120 ~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~~-~~~G~~------------~~~v~~~~~~~~~~d~~~l~ 180 (280)
|++|.+.+..+.... .+| ++|+..+-+|.+..... ...|.. +..++. .|++.++
T Consensus 101 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 173 (397)
T TIGR03246 101 GAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAK 173 (397)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHH
Confidence 999999995443222 133 57888888887654332 222211 112221 3789999
Q ss_pred HHHhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEe
Q 023599 181 QDLGAAPSGAIVLLQASGHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQ 259 (280)
Q Consensus 181 ~~~~~~~~~~~~v~~~~p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 259 (280)
+.+.++ .++|++...+++.|... +.+.+++|.++|++||+++|.||+|..+..... ......+ +....+ -
T Consensus 174 ~~l~~~---~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~--~~a~~~~-gv~pDi---~ 244 (397)
T TIGR03246 174 ALISDK---TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE--LYAYMHY-GVTPDI---L 244 (397)
T ss_pred HHhccC---eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc--chhhhhc-CCCCCE---E
Confidence 988643 33666664444455443 899999999999999999999999977744321 1111111 222233 3
Q ss_pred cccccccccccccceEEEEc
Q 023599 260 SYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 260 S~SK~~~~~G~RvG~~v~~~ 279 (280)
++||.++ .|+++||++...
T Consensus 245 t~~K~lg-gG~pigav~~~~ 263 (397)
T TIGR03246 245 TSAKALG-GGFPIGAMLTTT 263 (397)
T ss_pred Eeehhhh-CCcceeEEEEcH
Confidence 7899998 899999998753
No 245
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.43 E-value=2.1e-11 Score=112.13 Aligned_cols=223 Identities=15% Similarity=0.139 Sum_probs=124.9
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+|+..|.-...-|+. .+..+++..+++. .. ..+.......+.+..+++.+...-.. ..+.+.+ +++
T Consensus 39 dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~--~~--~~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f--~~s 109 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHN-NPRVVKAIKEQTD--KL--IHYTPIYGFPVEPLLLAEKLIEIAPG--DNPKVSF--GLS 109 (443)
T ss_pred CCCEEEEccccHhhcccCCC-CHHHHHHHHHHHH--hc--cCccccccCcHHHHHHHHHHHHhCCC--CCCEEEE--cCC
Confidence 45678999877421222321 2333344444443 11 11111112223344455544332111 1156777 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH-HHHcCC------------eeeEEEeecCCC--CC--------cCH
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF-FAAAGL------------AMKTYHYYDPKT--NG--------LDF 176 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~-~~~~G~------------~~~~v~~~~~~~--~~--------~d~ 176 (280)
|++|.+.+..+........+|+.-.-+|.+.... +...|. .+.+++..+... +. .+.
T Consensus 110 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08360 110 GSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV 189 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH
Confidence 9999999955433322335777777778665322 221121 123333311100 10 124
Q ss_pred HHHHHHHhcC--CCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCC
Q 023599 177 QGMLQDLGAA--PSGAIVLLQASGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGG 253 (280)
Q Consensus 177 ~~l~~~~~~~--~~~~~~v~~~~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 253 (280)
+.+++.+... ..+.+++++..-+||+|.+++ .+.+++|.++|++||+++|+||+|..|.... ...+...+ +..+
T Consensus 190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G--~~~a~~~~-~~~p 266 (443)
T PRK08360 190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG--KWFAIEHF-GVEP 266 (443)
T ss_pred HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--cchhhhhc-CCCC
Confidence 5566666531 234556666656799999888 5579999999999999999999999886532 11111122 3334
Q ss_pred eEEEEecccccccccccccceEEEE
Q 023599 254 ECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 254 ~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+++ ++||.++ +|+|+||+++.
T Consensus 267 Dii---tlsK~l~-~G~pigav~~~ 287 (443)
T PRK08360 267 DII---TLGKPLG-GGLPISATIGR 287 (443)
T ss_pred CEE---Eeccccc-CCceeEEEEEc
Confidence 554 6799999 99999999875
No 246
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.42 E-value=2e-11 Score=111.23 Aligned_cols=219 Identities=11% Similarity=-0.020 Sum_probs=126.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+|+..|.-...-|+ -.+..++++.+++. .. .+ +..... .+....+++.+...... .+.+.+ +++
T Consensus 38 dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~--~~-~~-~~~~~~-~~~~~~la~~L~~~~~~---~~~v~f--~~s 106 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGH-NDPDLVAALTEQAG--KL-WH-TSNVFY-SAPPLKLAEELVTASRF---AEKVFL--CNS 106 (408)
T ss_pred CCCEEEEcCccHhhccCCC-CCHHHHHHHHHHHH--hc-cc-cccccC-CHHHHHHHHHHHhhCCC---CCEEEE--cCc
Confidence 4567899977742111222 12333344444443 11 11 111111 22334455554432111 257777 999
Q ss_pred chhHHHHHHHHHHhh----c--CC-CEEEEeCCCCCChHHHHHH-cCCee---eEEEeecC--CCCCcCHHHHHHHHhcC
Q 023599 120 GSGSLRIGADFLAKH----Y--YQ-HTVYLSQPTYGNHPNFFAA-AGLAM---KTYHYYDP--KTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 120 ~~~al~~~~~~~~~~----~--~G-d~Vli~~P~y~~~~~~~~~-~G~~~---~~v~~~~~--~~~~~d~~~l~~~~~~~ 186 (280)
|++|.+.+.++.... . ++ .+|+...-+|.+....... .|-.. .+-+.... .-...|.+.+++.+..+
T Consensus 107 GseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 186 (408)
T PRK04612 107 GTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGG 186 (408)
T ss_pred hHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCC
Confidence 999999995544322 1 22 3688888888776433322 12110 00111000 00113788888888532
Q ss_pred CCCcEEEEecCCCCCCCCCCC--HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPT--AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~--~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
.+..++..|.+++|.+++ .+.+++|.++|++|++++|+||+|..|.... .. .... ....+..+.+|||.
T Consensus 187 ---~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G--~~---~a~~-~~~~~pdi~t~~K~ 257 (408)
T PRK04612 187 ---DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG--TL---FAHW-QEQVTPDIVTLAKA 257 (408)
T ss_pred ---CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC--ch---hhhh-hcCCCCCEEEEcch
Confidence 234555568888987777 5689999999999999999999999876532 11 1111 22346678899999
Q ss_pred ccccccccceEEEEc
Q 023599 265 MGLYGERVGALSVVR 279 (280)
Q Consensus 265 ~~~~G~RvG~~v~~~ 279 (280)
++ +|+|+||+++..
T Consensus 258 l~-~G~piga~~~~~ 271 (408)
T PRK04612 258 LG-GGFPIGAMLAGP 271 (408)
T ss_pred hc-CCCceEEEEECH
Confidence 98 899999998753
No 247
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.42 E-value=5.9e-12 Score=111.33 Aligned_cols=156 Identities=16% Similarity=0.138 Sum_probs=119.0
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH----HcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA----AAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~----~~G~~~~ 162 (280)
....|.+.+++.... .+.++ .++|+.|+..+ ++.++..|++|+..+..|.+....++ .+|++..
T Consensus 78 t~~~le~~iaal~ga--------~~~l~--fsSGmaA~~~a--l~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~ 145 (409)
T KOG0053|consen 78 TRDVLESGIAALEGA--------AHALL--FSSGMAAITVA--LLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGD 145 (409)
T ss_pred chHHHHHHHHHHhCC--------ceEEE--ecccHHHHHHH--HHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceee
Confidence 345677777776322 44555 99999999999 88889999999999999999877766 4677777
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.+++ -|++.+++++.++++ +|++.+|.||+..+. ++++|.++|+++|+++++|+.+...+... +
T Consensus 146 ~vd~-------~~~~~~~~~i~~~t~---~V~~ESPsNPll~v~---DI~~l~~la~~~g~~vvVDnTf~~p~~~~---p 209 (409)
T KOG0053|consen 146 FVDV-------DDLKKILKAIKENTK---AVFLESPSNPLLKVP---DIEKLARLAHKYGFLVVVDNTFGSPYNQD---P 209 (409)
T ss_pred eech-------hhHHHHHHhhccCce---EEEEECCCCCccccc---cHHHHHHHHhhCCCEEEEeCCcCcccccC---h
Confidence 7766 368889999887666 999999999997765 56777888889999999999998885531 1
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
. ..+.. |++.|.||.++-.+-=+|=+++
T Consensus 210 ---L---~lGAD-IV~hSaTKyi~Ghsdvi~G~iv 237 (409)
T KOG0053|consen 210 ---L---PLGAD-IVVHSATKYIGGHSDVIGGSVV 237 (409)
T ss_pred ---h---hcCCC-EEEEeeeeeecCCcceeeeEEe
Confidence 1 22222 6699999999866655554444
No 248
>PRK04311 selenocysteine synthase; Provisional
Probab=99.41 E-value=4e-11 Score=110.34 Aligned_cols=211 Identities=18% Similarity=0.151 Sum_probs=133.3
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCC---CC--CHHHHHHHHHHHhCCCCccccCCCeEEee
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPI---TG--LPEFNKLSAKLIFGADSPAIKENRVSTVQ 116 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~---~G--~~~lr~~ia~~l~~~~~~~~~~~~i~~v~ 116 (280)
..+||.+-..+.++.+.+..++.+.+++.+... .....+|... .| +..+++.+++++.. ++.++
T Consensus 79 r~vinatg~v~~tNlg~s~l~~~v~eav~~~~~-~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--------e~a~v-- 147 (464)
T PRK04311 79 RPVINATGVVLHTNLGRALLSEAAIEAVTEAAR-GYSNLEYDLATGKRGSRDRALAALLCALTGA--------EDALV-- 147 (464)
T ss_pred cceecCCccEEeccCCCCCCCHHHHHHHHHHHh-cccccccchhhcccchHHHHHHHHHHHHhCC--------CeEEE--
Confidence 567887644444444555555555555545442 2212223221 12 25788888887522 34455
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC------hHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCc
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN------HPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGA 190 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~------~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 190 (280)
+++++.|+.++ + ..+.+||+|++++..+.. ....++..|+++++++. .. ..+++.+++++.++++
T Consensus 148 v~sgtaAl~l~--l-~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~-~~---~t~~~dle~aI~~~Tk-- 218 (464)
T PRK04311 148 VNNNAAAVLLA--L-NALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGT-TN---RTHLRDYEQAINENTA-- 218 (464)
T ss_pred ECCHHHHHHHH--H-HHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECC-CC---CCCHHHHHHhcCccCe--
Confidence 88888999888 5 346899999999753321 23456778999999876 22 3578999999987655
Q ss_pred EEEEecCCCCCC--CCCCCHHHHHHHHHHHHhCCceeEEcccCCCcc----cCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 191 IVLLQASGHNPT--GIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV----MNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 191 ~~v~~~~p~NPT--G~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~----~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
++++.+++||+ |.. ...++++|+++|++||+++|+|...+.+. +... ..+.+....+.+.. ++++|.+|.
T Consensus 219 -lV~~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~-~~p~~~~~l~~GaD-iv~fSg~K~ 294 (464)
T PRK04311 219 -LLLKVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLP-DEPTVQELLAAGVD-LVTFSGDKL 294 (464)
T ss_pred -EEEEEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCC-CCCchhhHHhcCCc-EEEecCccc
Confidence 78888899994 422 23458888999999999999999644331 1100 01122333333334 668999999
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
+|-| ..|++++.
T Consensus 295 LgGp--~~G~i~g~ 306 (464)
T PRK04311 295 LGGP--QAGIIVGK 306 (464)
T ss_pred ccCC--ceEEEEEc
Confidence 8744 58887764
No 249
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.41 E-value=2e-11 Score=110.04 Aligned_cols=164 Identities=19% Similarity=0.165 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh---hcCCCEEEEeCCCCCChH----HHHHHcCCe
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK---HYYQHTVYLSQPTYGNHP----NFFAAAGLA 160 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~---~~~Gd~Vli~~P~y~~~~----~~~~~~G~~ 160 (280)
..+.|+.+++++.... +++|++ +.|++.+++.+ +.++ +.+||+|++.+-.|+... ...+..|++
T Consensus 45 ~~~~r~~la~~lg~~~-----~~~v~~--~~~~t~a~~~~--~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 115 (371)
T PF00266_consen 45 LEEAREALAKLLGAPP-----DEEVVF--TSNGTEALNAV--ASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAE 115 (371)
T ss_dssp HHHHHHHHHHHHTSST-----TEEEEE--ESSHHHHHHHH--HHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCcc-----cccccc--ccccchhhhhh--hhccccccccccccccccccccccccccccccccchhh
Confidence 3578888888874331 167777 99999999999 6666 689999999998886655 333467999
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
+..++. + .+..+|++.+++++.++++ +++++..+|-||...+ +++|.++|+++++++++|.+.+-...+.
T Consensus 116 v~~i~~-~-~~~~~~~~~~~~~l~~~~~---lv~~~~~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~g~~~i-- 185 (371)
T PF00266_consen 116 VRVIPA-D-PGGSLDLEDLEEALNPDTR---LVSISHVENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSAGCVPI-- 185 (371)
T ss_dssp EEEEEE-G-TTSSCSHHHHHHHHHTTES---EEEEESBETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTTTTSS---
T ss_pred hccccc-c-ccchhhhhhhhhhhccccc---eEEeecccccccEEee---eceehhhhhccCCceeEechhccccccc--
Confidence 999998 3 3457899999999986665 8888888999999887 5567889999999999999987654431
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.+.+.+.. +++.|.-|.+|.+| +|++++..
T Consensus 186 ------d~~~~~~D-~~~~s~~Kl~gp~G--~g~l~v~~ 215 (371)
T PF00266_consen 186 ------DLDELGAD-FLVFSSHKLGGPPG--LGFLYVRP 215 (371)
T ss_dssp -------TTTTTES-EEEEESTSTTSSST--EEEEEEEH
T ss_pred ------cccccccc-eeeecccccCCCCc--hhhheehh
Confidence 12122212 56889999555454 68887653
No 250
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.40 E-value=3.3e-11 Score=110.43 Aligned_cols=223 Identities=9% Similarity=0.051 Sum_probs=124.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCC--CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEY--LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
.+...+|+..|.-...-|+. .++.++++.+++. +.....+ .+.....+|.+.+++..-+. ..+.+.+ +
T Consensus 31 dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~ql~--~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f--~ 100 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHS-HPRVVDAVRTQVA--EFTHTCFMVTPYEGYVALAEKLNRIAPGS-----GPKKSVF--F 100 (420)
T ss_pred CCCEEEECccCHHhccCCCC-CHHHHHHHHHHHH--hccCccccccCChHHHHHHHHHHHhCCCC-----CCCEEEE--e
Confidence 45678998777431222322 2344444444444 2111111 11111234444444442111 1156777 9
Q ss_pred ccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHc-C--------C-----eeeEEEeecCCC---------CCc
Q 023599 118 LSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAA-G--------L-----AMKTYHYYDPKT---------NGL 174 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~-G--------~-----~~~~v~~~~~~~---------~~~ 174 (280)
++|++|++.+..+........+|+...-+|.+........ | . .+..++..+... +.-
T Consensus 101 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (420)
T TIGR00700 101 NSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDG 180 (420)
T ss_pred CCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHH
Confidence 9999999999554433333357888888887754332221 1 1 112222200000 001
Q ss_pred CHHHHHHHHh--cCCCCcEEEEecCCCCCCCCCCCHHH-HHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc
Q 023599 175 DFQGMLQDLG--AAPSGAIVLLQASGHNPTGIDPTAQQ-WEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD 251 (280)
Q Consensus 175 d~~~l~~~~~--~~~~~~~~v~~~~p~NPTG~~~~~~~-l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 251 (280)
+++.+++.+. ..+++...|++..-+.-+|..++..+ +++|.++|++|++++|+||+|..|.... ...+.... +.
T Consensus 181 ~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g--~~~a~~~~-~~ 257 (420)
T TIGR00700 181 ELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG--AMFACEHE-GP 257 (420)
T ss_pred HHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc--hhHHHhhc-CC
Confidence 2456776663 22344566666666666788765555 9999999999999999999999987642 12121111 11
Q ss_pred CCeEEEEecccccccccccccceEEEEc
Q 023599 252 GGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 252 ~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
... +.+|||.++ +|+|+||+++..
T Consensus 258 ~pD---i~~lsK~l~-~G~pig~v~~~~ 281 (420)
T TIGR00700 258 EPD---LITTAKSLA-DGLPLSGVTGRA 281 (420)
T ss_pred CCC---EEEeecccc-CCcceEEEEecH
Confidence 223 456999999 999999998753
No 251
>PLN02624 ornithine-delta-aminotransferase
Probab=99.40 E-value=4.5e-11 Score=110.98 Aligned_cols=213 Identities=11% Similarity=0.085 Sum_probs=127.8
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
+...+||..|.....-|+ -.+..++++.+++.+ -.....+.......+|.+.+++++ + .+.+++ +++|
T Consensus 74 G~~ylD~~sg~~~~~~Gh-~~p~v~~ai~~ql~~-~~~~~~~~~~~~~~~la~~L~~~~-~-------~~~~~f--~~SG 141 (474)
T PLN02624 74 GKKYLDFLSAYSAVNQGH-CHPKIIKALTEQAEK-LTLSSRAFYNDKFPEFAEYLTSMF-G-------YDMVLP--MNTG 141 (474)
T ss_pred CCEEEEcccchhcccCCC-CCHHHHHHHHHHHHh-cCCcccccCCHHHHHHHHHHHhhc-C-------CCeEEE--eCCh
Confidence 456788876642111121 134444444444442 111111122233455677777653 1 256777 8999
Q ss_pred hhHHHHHHHHHHhh---c----CCC-EEEEeCCCCCChHHHHHHcCCe-------------eeEEEeecCCCCCcCHHHH
Q 023599 121 SGSLRIGADFLAKH---Y----YQH-TVYLSQPTYGNHPNFFAAAGLA-------------MKTYHYYDPKTNGLDFQGM 179 (280)
Q Consensus 121 ~~al~~~~~~~~~~---~----~Gd-~Vli~~P~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~~d~~~l 179 (280)
++|.+.+..+.... . +|+ +|+...-+|.+........... +..++. -|++.+
T Consensus 142 seA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 214 (474)
T PLN02624 142 AEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDAL 214 (474)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHH
Confidence 99999984433321 1 133 5666666776543222211111 112221 268899
Q ss_pred HHHHhcCCCCcEEEEecCCCCCCCCCCCHHH-HHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEE
Q 023599 180 LQDLGAAPSGAIVLLQASGHNPTGIDPTAQQ-WEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVA 258 (280)
Q Consensus 180 ~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~-l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~ 258 (280)
++.++....+..+|++..++|++|.+++.++ +++|.++|++||+++|.||+|..+.... ..... ...+...+++.
T Consensus 215 ~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG--~~~a~-~~~~i~pDiv~- 290 (474)
T PLN02624 215 EKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTG--KMLAC-DWEEVRPDVVI- 290 (474)
T ss_pred HHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCc--chhhH-HhcCCCCCEEE-
Confidence 9988755455678999999999999988775 9999999999999999999998765432 11111 11122234443
Q ss_pred ecccccccccccccceEEEE
Q 023599 259 QSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 259 ~S~SK~~~~~G~RvG~~v~~ 278 (280)
+||.++..++++|++++.
T Consensus 291 --lsK~lggG~~pigav~~~ 308 (474)
T PLN02624 291 --LGKALGGGVIPVSAVLAD 308 (474)
T ss_pred --ecccccCCCCcceeeeec
Confidence 689999777999999865
No 252
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.39 E-value=5.6e-11 Score=109.09 Aligned_cols=212 Identities=17% Similarity=0.122 Sum_probs=130.1
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCC---CC--CHHHHHHHHHHHhCCCCccccCCCeEEee
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPI---TG--LPEFNKLSAKLIFGADSPAIKENRVSTVQ 116 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~---~G--~~~lr~~ia~~l~~~~~~~~~~~~i~~v~ 116 (280)
..+||.+--.+.++.+....++.+.+++.+... .....+|.-. .| ...+++.+++++.. +..++
T Consensus 74 r~vinatg~v~~tNlg~s~l~~~vieAv~~~~~-~y~~l~~~l~~g~~g~r~~~le~~lA~l~ga--------e~alv-- 142 (454)
T TIGR00474 74 RRVINATGVVLHTNLGRAPLAEEAIEAVTDAAR-GYSNLEYDLETGKRGSRYSHVEGLLCELTGA--------EDALV-- 142 (454)
T ss_pred cceeCCCCcEEeccCCCCCCCHHHHHHHHHHHh-cccchhccccccccchHHHHHHHHHHHHhCC--------CcEEE--
Confidence 356675433333444554444444444444432 2212223211 12 36788889888532 33344
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCC---CC---hHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCc
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTY---GN---HPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGA 190 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y---~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 190 (280)
+++++.|+.++ + ..+.+||+|++++..+ ++ +...++..|+++++++. +. ..+++.+++++.++++
T Consensus 143 v~sg~aAi~l~--l-~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~-~~---~~~l~dle~aI~~~T~-- 213 (454)
T TIGR00474 143 VNNNAAAVLLA--L-NTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGT-TN---RTHLKDYEDAITENTA-- 213 (454)
T ss_pred ECCHHHHHHHH--H-HHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCC-CC---CCCHHHHHHhcCcCCE--
Confidence 77888898877 5 4478999999998653 22 23456678999998876 22 3578999999987655
Q ss_pred EEEEecCCCCCC--CCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc--CC-ChhHHHHhhhcCCeEEEEecccccc
Q 023599 191 IVLLQASGHNPT--GIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM--DA-DALPVRMFVADGGECLVAQSYSKTM 265 (280)
Q Consensus 191 ~~v~~~~p~NPT--G~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~--~~-~~~~~~~~~~~~~~~i~~~S~SK~~ 265 (280)
+++..+++||+ |.. ...++++|+++|+++|+++++|.+.+-+..-. .. ..+.+....+.+.. +++.|.+|.+
T Consensus 214 -lv~~~h~sN~~~~G~~-~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaD-iv~fSg~K~L 290 (454)
T TIGR00474 214 -LLLKVHTSNYRIVGFT-EEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVD-LVTFSGDKLL 290 (454)
T ss_pred -EEEEEccCcccccCCC-CCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCC-EEEecCcccc
Confidence 77888899996 521 22357788999999999999998744331100 00 01111223333334 7789999998
Q ss_pred cccccccceEEEE
Q 023599 266 GLYGERVGALSVV 278 (280)
Q Consensus 266 ~~~G~RvG~~v~~ 278 (280)
+-| ..|++++.
T Consensus 291 gGp--~~G~i~g~ 301 (454)
T TIGR00474 291 GGP--QAGIIVGK 301 (454)
T ss_pred CCC--eEEEEEEC
Confidence 645 57887764
No 253
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.38 E-value=1.9e-11 Score=110.41 Aligned_cols=178 Identities=12% Similarity=0.083 Sum_probs=125.1
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC-hHHHHHHcCC
Q 023599 81 EYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN-HPNFFAAAGL 159 (280)
Q Consensus 81 ~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~-~~~~~~~~G~ 159 (280)
.|...+....|.+++++++. . ++++. |++|+.|++++ +...++|||+| +.++|.. +...+...|+
T Consensus 66 ~yag~~s~~~lE~~va~~~G-~-------~~av~--v~sGT~Al~ll--~~l~l~pGDeV--psn~~f~Tt~ahIe~~Ga 131 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELYG-F-------KYVVP--THQGRGAENLL--SQIAIKPGDYV--PGNMYFTTTRYHQEKNGA 131 (450)
T ss_pred hhcCCCcHHHHHHHHHHHHC-C-------CeEEE--cCCHHHHHHHH--HHhCCCCcCEE--CCceeHHHHHHHHHhCCe
Confidence 58888889999999999962 2 55666 99999999987 55567899987 6677743 3444677888
Q ss_pred eeeEEEee--------cCCCCCcCHHHHHHHHhcCC-CCcEEEEecCCCCC-CCCCCCHHHHHHHHHHHHhCCceeEEcc
Q 023599 160 AMKTYHYY--------DPKTNGLDFQGMLQDLGAAP-SGAIVLLQASGHNP-TGIDPTAQQWEQIRQLMRLKRLLPFFDC 229 (280)
Q Consensus 160 ~~~~v~~~--------~~~~~~~d~~~l~~~~~~~~-~~~~~v~~~~p~NP-TG~~~~~~~l~~i~~~~~~~~~~ii~De 229 (280)
.++.++.. ++.++.+|++.+++++.++. .+..++++.+++|- .|.+++.++++++.++|++||+.|++|.
T Consensus 132 v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~Da 211 (450)
T TIGR02618 132 TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDA 211 (450)
T ss_pred EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 66666441 13457889999999998642 22336667778885 5899999999999999999999999999
Q ss_pred cCCC----ccc--CcCCChhHH----HHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 230 AYQG----FVM--NMDADALPV----RMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 230 ~y~~----~~~--~~~~~~~~~----~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
+... |+- ++.....++ +.+... ... ++.|..|+++.+ +|=+++
T Consensus 212 AR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~-aD~-~~~S~~Kd~~~~---~GG~l~ 264 (450)
T TIGR02618 212 TRCVENAYFIKEREQGYEDKSIAEILKEMMSY-ADG-CTMSGKKDCLVN---IGGFLC 264 (450)
T ss_pred cchhhChhhhhcccccccCCCHHHHHHHHhcc-CcE-EEEeeccCCCCC---CceEEE
Confidence 8754 210 000011122 222222 233 788999988654 566665
No 254
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.38 E-value=8.9e-11 Score=106.98 Aligned_cols=214 Identities=12% Similarity=0.088 Sum_probs=125.6
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|......|+ ..+..+++..+.+.. ...........-..+|.+.+++++ + .+.+++ +++
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh-~~p~v~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~S 102 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGH-CHPKIVKALTEQAQK-LTLSSRAFYNDVFGEFAEYVTKLF-G-------YDKVLP--MNT 102 (401)
T ss_pred CCCEEEEcccCHhhccCCC-CCHHHHHHHHHHHHh-ccccccccCCHHHHHHHHHHHhhc-C-------CCEEEE--eCc
Confidence 4567889987642111111 123333333333331 111111111222355666666663 1 156676 999
Q ss_pred chhHHHHHHHHHHhh-------cCC-CEEEEeCCCCCCh-HHHHHHcCC------------eeeEEEeecCCCCCcCHHH
Q 023599 120 GSGSLRIGADFLAKH-------YYQ-HTVYLSQPTYGNH-PNFFAAAGL------------AMKTYHYYDPKTNGLDFQG 178 (280)
Q Consensus 120 ~~~al~~~~~~~~~~-------~~G-d~Vli~~P~y~~~-~~~~~~~G~------------~~~~v~~~~~~~~~~d~~~ 178 (280)
|++|++.+..+.... ..| ++|+.-.-+|.+. ...+...|- .+..++. .|++.
T Consensus 103 Gs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 175 (401)
T TIGR01885 103 GAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEA 175 (401)
T ss_pred cHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHH
Confidence 999999994332211 133 5677777777653 333332221 1222222 27899
Q ss_pred HHHHHhcCCCCcEEEEecCCCCCCCCCCCHH-HHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEE
Q 023599 179 MLQDLGAAPSGAIVLLQASGHNPTGIDPTAQ-QWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLV 257 (280)
Q Consensus 179 l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~-~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~ 257 (280)
+++.+++...+..++++...++++|...+.+ .+++|.++|++|++++|+||+|..+.... ..... ...+..++++
T Consensus 176 le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G--~~~~~-~~~~~~~di~- 251 (401)
T TIGR01885 176 LEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG--KLLCV-DHENVKPDIV- 251 (401)
T ss_pred HHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--hhhHH-hhcCCCCCEE-
Confidence 9998865444456777888999999988644 69999999999999999999997765432 11111 1222234555
Q ss_pred EecccccccccccccceEEEE
Q 023599 258 AQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 258 ~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.+||.++..|+|+||++..
T Consensus 252 --~~gK~l~~g~~~ig~v~~~ 270 (401)
T TIGR01885 252 --LLGKALSGGVYPVSAVLAD 270 (401)
T ss_pred --EeeccccCCCCCcEEEEEc
Confidence 4679998666999998875
No 255
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.37 E-value=6.5e-11 Score=109.40 Aligned_cols=159 Identities=12% Similarity=0.093 Sum_probs=94.7
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHc-CC-------------eeeEEEeecCC--CCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAA-GL-------------AMKTYHYYDPK--TNG 173 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~-G~-------------~~~~v~~~~~~--~~~ 173 (280)
+.+.+ +++|++|.+.+..+........+|+...-+|.+........ |- .+..+|..+.. ..+
T Consensus 116 ~~v~f--~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (451)
T PRK06918 116 KKVLF--LNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEG 193 (451)
T ss_pred CEEEE--cCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCcccccccc
Confidence 46777 99999999999554433323357888888887764333221 11 12222221000 011
Q ss_pred cC--------HHHHHHHHhc--CCCCcEEEEecCCCCCC-CCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 174 LD--------FQGMLQDLGA--APSGAIVLLQASGHNPT-GIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 174 ~d--------~~~l~~~~~~--~~~~~~~v~~~~p~NPT-G~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
.. .+.+++.+.. ...+..++++ .|-+.. |.+++ .+.+++|.++|++||+++|+||+|..|.... .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~-EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g--~ 270 (451)
T PRK06918 194 LTEEQYDDFMIEEFKNFFISEVAPETIAAVVM-EPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG--K 270 (451)
T ss_pred CchHHHHHHHHHHHHHHHHhhcCCCceEEEEE-CcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC--c
Confidence 11 1234433321 1223334444 455555 55454 5559999999999999999999999997642 2
Q ss_pred hhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+...+ +.... +.||||.++ +|+|+||+++.
T Consensus 271 ~~a~~~~-~v~pD---i~t~sK~l~-~G~pig~v~~~ 302 (451)
T PRK06918 271 YFAIEHF-DVVPD---LITVSKSLG-AGVPISGVIGR 302 (451)
T ss_pred eehhHhc-CCCCC---EEeeehhhc-CCCccEEEEEc
Confidence 2233333 21223 558999999 99999999975
No 256
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.35 E-value=1.6e-10 Score=105.83 Aligned_cols=159 Identities=13% Similarity=0.132 Sum_probs=102.7
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH-cCCe-------------eeEEEeecCCCC---
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA-AGLA-------------MKTYHYYDPKTN--- 172 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~-~G~~-------------~~~v~~~~~~~~--- 172 (280)
+.+.+ +++|++|.+.+.++........+|+...-+|.+....... .|.. +..++. .....
T Consensus 102 ~~~~f--~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~ 178 (421)
T PRK06777 102 AKTAF--FTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVS 178 (421)
T ss_pred ceEEE--eCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcC
Confidence 56776 8899999999955443332335788888888776433332 1210 111222 01001
Q ss_pred -CcCHHHHHHHHhc--CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHh
Q 023599 173 -GLDFQGMLQDLGA--APSGAIVLLQASGHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMF 248 (280)
Q Consensus 173 -~~d~~~l~~~~~~--~~~~~~~v~~~~p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 248 (280)
..+++.+++.+.+ .+.+..++++....+..|. +.+.+.+++|.++|++||+++|.||+|..|.... ...+...+
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g--~~~~~~~~ 256 (421)
T PRK06777 179 VEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG--KLFAMEYY 256 (421)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC--chhhhhhc
Confidence 1135667777753 2344556666666777885 5789999999999999999999999999886542 12222222
Q ss_pred hhcCCeEEEEecccccccccccccceEEEE
Q 023599 249 VADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 249 ~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+...+++ ++||.++ +|+|+||+++.
T Consensus 257 -~~~pDiv---~~sK~l~-~G~pigav~~~ 281 (421)
T PRK06777 257 -DVKPDLI---TMAKSLG-GGMPISAVVGR 281 (421)
T ss_pred -CCCCCEE---eeehhhc-CCCceEEEEEc
Confidence 2223443 7999999 99999999875
No 257
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.34 E-value=2.9e-11 Score=108.98 Aligned_cols=154 Identities=14% Similarity=0.114 Sum_probs=104.7
Q ss_pred CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChH----HHHHHcCCe
Q 023599 85 ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHP----NFFAAAGLA 160 (280)
Q Consensus 85 ~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~----~~~~~~G~~ 160 (280)
.+....|.+.++++... +..++ +++|+.|+.++ +++++.+||+|+++.+.|.... ..+...|++
T Consensus 63 ~P~~~~lE~~la~leg~--------~~av~--~sSG~aAi~~a--l~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~ 130 (384)
T PRK06434 63 NPTVQAFEEKYAVLENA--------EHALS--FSSGMGAITSA--ILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIH 130 (384)
T ss_pred ChhHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcE
Confidence 33456788888888522 33444 89999999999 8888999999999988776654 445678999
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
+++++..+.+++. +.+ .+..+|++.+|+|||+.+ .++++|+++|++++ +++|.++..-...
T Consensus 131 v~fvd~~~~~~~~---------l~~--~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~~~--- 191 (384)
T PRK06434 131 VDYIDTDRLNSLD---------FDP--SNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPYNQ--- 191 (384)
T ss_pred EEEECCCChhhee---------ecC--CCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcccC---
Confidence 9999872212222 122 123488899999999876 46788899999998 4569997433221
Q ss_pred ChhHHHHhhhcCCeEEEEecccccccccccccceEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTMGLYGERVGALS 276 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v 276 (280)
+.+ +.+.. +++.|.+|.++.+|-=+|=++
T Consensus 192 -----~pl-~~gaD-ivv~S~tK~i~G~~d~~gG~v 220 (384)
T PRK06434 192 -----NPL-DLGAD-VVIHSATKYISGHSDVVMGVA 220 (384)
T ss_pred -----Cch-hcCCC-EEEeecccccCCCCCceEEEE
Confidence 111 22223 568889999976553333333
No 258
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.33 E-value=2.4e-11 Score=105.36 Aligned_cols=177 Identities=13% Similarity=0.046 Sum_probs=124.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCC---ChHHHHHHc
Q 023599 81 EYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYG---NHPNFFAAA 157 (280)
Q Consensus 81 ~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~---~~~~~~~~~ 157 (280)
.|.......+|++.+++.+. . +..++ +++|+.|..++ +...+.|++.|++.++++. .........
T Consensus 24 ~Yg~D~~~~~l~~~i~~l~g-~-------e~a~f--~~sGT~An~~a--l~~~~~~~~~vi~~~~aHi~~~E~ga~~~~~ 91 (290)
T PF01212_consen 24 AYGEDPTTARLEERIAELFG-K-------EAALF--VPSGTMANQLA--LRAHLRPGESVICADTAHIHFDETGAIEELS 91 (290)
T ss_dssp CTTSSHHHHHHHHHHHHHHT-S-------SEEEE--ESSHHHHHHHH--HHHHHHTTEEEEEETTEHHHHSSTTHHHHHT
T ss_pred ccCCChhHHHHHHHHHHHcC-C-------CEEEE--eCCCChHHHHH--HHHHHhcCCceeccccceeeeeccchhhHhc
Confidence 58888788899999999863 2 44455 88999999999 7777899999999998652 223333458
Q ss_pred CCeeeEEEeecCCCCCcCHHHHHHHHhcC---CCCcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHhCCceeEEcccCCC
Q 023599 158 GLAMKTYHYYDPKTNGLDFQGMLQDLGAA---PSGAIVLLQASGHNPT-GIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG 233 (280)
Q Consensus 158 G~~~~~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~v~~~~p~NPT-G~~~~~~~l~~i~~~~~~~~~~ii~De~y~~ 233 (280)
|++++.++. .++..+|++.+++.+.+. ..++.+|++++|+|-. |++++.+++++|.++|++||+.+..|-+-..
T Consensus 92 G~~~~~l~~--~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~ 169 (290)
T PF01212_consen 92 GAKLIPLPS--DDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLA 169 (290)
T ss_dssp TCEEEEEBE--CTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHH
T ss_pred CcEEEECCC--cccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHH
Confidence 999999987 333579999999999873 2456799999999875 8899999999999999999999999997422
Q ss_pred cccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 234 FVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
-... ....++..+. ..-.++ .-|+||..+++ .|-+++.
T Consensus 170 ~a~~--~~~~~~~e~~-~~~D~v-~~~~tK~~g~~---~Gavl~~ 207 (290)
T PF01212_consen 170 NAAA--ALGVSLAEIA-AGADSV-SFGGTKNGGAP---GGAVLAG 207 (290)
T ss_dssp HHHC--HHHHHHHHHH-TTSSEE-EEETTSTT-SS---SEEEEEE
T ss_pred Hhhh--cccccHHHHh-hhCCEE-EEEEEcccccc---cceEEEe
Confidence 1110 0112233332 233455 56899998765 5666654
No 259
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.31 E-value=1.3e-10 Score=106.15 Aligned_cols=144 Identities=15% Similarity=0.053 Sum_probs=101.9
Q ss_pred cCCCeEEeecccchhHHHHHHHHHHhhcCC---CEEEEeCCCCCChH----HHHHHcCCee----eEEEeecCCCCCcCH
Q 023599 108 KENRVSTVQCLSGSGSLRIGADFLAKHYYQ---HTVYLSQPTYGNHP----NFFAAAGLAM----KTYHYYDPKTNGLDF 176 (280)
Q Consensus 108 ~~~~i~~v~t~g~~~al~~~~~~~~~~~~G---d~Vli~~P~y~~~~----~~~~~~G~~~----~~v~~~~~~~~~~d~ 176 (280)
.+++|++ |.|++++++++ +.+++.+| +.|++....|+... ..++..|+++ +.++. .+++.+|+
T Consensus 85 ~~~~v~~--~~~~t~~l~~~--~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~ 158 (406)
T TIGR01814 85 KEDEVVV--MNTLTINLHLL--LASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRL 158 (406)
T ss_pred CCCcEEE--eCCchHHHHHH--HHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCH
Confidence 4688988 99999999998 66655554 36888888887632 2345678877 34544 23456789
Q ss_pred HHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEE
Q 023599 177 QGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECL 256 (280)
Q Consensus 177 ~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 256 (280)
+.+++.+...+.+.+++++++++|.||..++ +++|.++|+++|+++++|++..--..+. .+.+.+. =+
T Consensus 159 ~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~~i--------d~~~~gv-D~ 226 (406)
T TIGR01814 159 EDILDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNVPL--------DLHDWGV-DF 226 (406)
T ss_pred HHHHHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCCccc--------ccccCCC-CE
Confidence 9999888643334558999999999999987 6677889999999999999986644321 1111222 25
Q ss_pred EEeccccccc-ccc
Q 023599 257 VAQSYSKTMG-LYG 269 (280)
Q Consensus 257 ~~~S~SK~~~-~~G 269 (280)
++.|..|.++ .||
T Consensus 227 ~~~s~hK~l~g~pG 240 (406)
T TIGR01814 227 ACWCTYKYLNAGPG 240 (406)
T ss_pred EEEcCccccCCCCC
Confidence 6788899863 355
No 260
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.30 E-value=4.6e-11 Score=105.47 Aligned_cols=163 Identities=13% Similarity=0.070 Sum_probs=118.9
Q ss_pred ecCCCCccchHHHHHHHHHHhc----cCCCCCCCCC--CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHH
Q 023599 53 RTEEGKPLLLNAVRQAEQLLVN----DLSADKEYLP--ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRI 126 (280)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~y~~--~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~ 126 (280)
+|.+..+++.+.+.+++..... ++...+.|+. ...+++.|+.+|+.+... +++|++ |+|||++.++
T Consensus 5 lD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~------~~eIiF--TSG~TEsnNl 76 (386)
T COG1104 5 LDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGAD------PEEIIF--TSGATESNNL 76 (386)
T ss_pred ccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--ecCCcHHHHH
Confidence 3445555555555554444432 1222333421 233567888888886433 488888 9999999999
Q ss_pred HHHHHH--hhc----CCCEEEEeCCCCCChHHHHHHc---CCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecC
Q 023599 127 GADFLA--KHY----YQHTVYLSQPTYGNHPNFFAAA---GLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQAS 197 (280)
Q Consensus 127 ~~~~~~--~~~----~Gd~Vli~~P~y~~~~~~~~~~---G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~ 197 (280)
+ +.+ ... .|.+|+++.-.+....+.++.+ |+++.++|. +. ++.+|+++|++++++++. +|.+..
T Consensus 77 a--I~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V-~~-~G~v~~e~L~~al~~~T~---LVSim~ 149 (386)
T COG1104 77 A--IKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPV-DS-NGLVDLEQLEEALRPDTI---LVSIMH 149 (386)
T ss_pred H--HHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCC-CC-CCeEcHHHHHHhcCCCce---EEEEEe
Confidence 8 665 222 4689999988887777777655 999999998 33 678999999999987654 888888
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC
Q 023599 198 GHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG 233 (280)
Q Consensus 198 p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~ 233 (280)
.||-||++.+ +++|.++|+++++++.+|.+..-
T Consensus 150 aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~ 182 (386)
T COG1104 150 ANNETGTIQP---IAEIGEICKERGILFHVDAVQAV 182 (386)
T ss_pred cccCeeeccc---HHHHHHHHHHcCCeEEEehhhhc
Confidence 9999999887 55668999999999999998644
No 261
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.29 E-value=2.8e-10 Score=104.23 Aligned_cols=222 Identities=10% Similarity=0.100 Sum_probs=124.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSAD-KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...+|+..|.....-|+ -.+..+++..+++.+ -... ..+.+.....+|-+.+++.+-+. ..+.+.+ ++
T Consensus 38 dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~-l~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f--~~ 108 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGH-RHPRVIAAVKAQLDR-FTHTCHQVVPYENYVRLAERLNALVPGD-----FAKKTIF--VT 108 (425)
T ss_pred CCCEEEEccccHHhhccCC-CCHHHHHHHHHHHhh-ccCcccCccCCHHHHHHHHHHHHhCCCC-----CCCEEEE--CC
Confidence 4567899887753121232 223333444444431 1100 11222222234444444432110 0156777 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH-cCC-------------eeeEEEeecCCCCCcC----HHHHH
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA-AGL-------------AMKTYHYYDPKTNGLD----FQGML 180 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~-~G~-------------~~~~v~~~~~~~~~~d----~~~l~ 180 (280)
+|++|.+.+.++........+|+...-+|.+....... .|. .+..+|.. ....+.+ ++.++
T Consensus 109 SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~l~ 187 (425)
T PRK07495 109 TGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFP-VELHGVSVEQSLAALD 187 (425)
T ss_pred chHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCC-cccccccHHHHHHHHH
Confidence 99999999954433332336788888888765322211 110 12334431 1111222 44556
Q ss_pred HHHhc---CCCCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEE
Q 023599 181 QDLGA---APSGAIVLLQASGHNPTG-IDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECL 256 (280)
Q Consensus 181 ~~~~~---~~~~~~~v~~~~p~NPTG-~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 256 (280)
+.+.. ..+.+.+++-+..+| +| ..++.+.+++|.++|++||+++|+||+|..|..... . ..+ +....+.
T Consensus 188 ~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~---~a~-~~~gv~p 260 (425)
T PRK07495 188 KLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK--L---FAM-EHHEVAA 260 (425)
T ss_pred HHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC--c---eee-cccCCCC
Confidence 66642 122345555555666 78 457999999999999999999999999988755321 1 111 1122445
Q ss_pred EEecccccccccccccceEEEEc
Q 023599 257 VAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 257 ~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.+.+|||.++ .|+++||+++..
T Consensus 261 Di~tlsK~l~-~G~pigav~~~~ 282 (425)
T PRK07495 261 DLTTMAKGLA-GGFPLAAVTGRA 282 (425)
T ss_pred CEEeehhhhc-CCccceEEEEcH
Confidence 6889999998 899999998753
No 262
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.26 E-value=8.3e-10 Score=98.78 Aligned_cols=203 Identities=11% Similarity=0.000 Sum_probs=137.3
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhcc-CC---CCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEee
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVND-LS---ADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQ 116 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~ 116 (280)
+..++||...+| -|+..-++.++++.+.+... .+ .-.-++...-..+|.+.+|+|+.. +..++
T Consensus 38 ~~~~~nf~SNdY---LGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~--------e~al~-- 104 (388)
T COG0156 38 GRKVLNFCSNDY---LGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA--------EAALL-- 104 (388)
T ss_pred CceeEeeeccCc---ccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--------CcEEE--
Confidence 467899999988 44444455555555554421 11 011122333356788999999522 45555
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC-C--CcEEE
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP-S--GAIVL 193 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-~--~~~~v 193 (280)
.++|-.|...+ +-+++++||.|+.-.-.+-....-++..+++++.+.- .|++.|++.+++.. . +.++|
T Consensus 105 f~SGy~AN~~~--i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~I 175 (388)
T COG0156 105 FSSGFVANLGL--LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLI 175 (388)
T ss_pred EcccchhHHHH--HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEE
Confidence 67777788777 7788889999998888777777777888888887764 47899999997731 1 34577
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHh-hhcCCeEEEEecccccccccc
Q 023599 194 LQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMF-VADGGECLVAQSYSKTMGLYG 269 (280)
Q Consensus 194 ~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G 269 (280)
+...--.=.|.+.+ +++|++++++|+.++++||+|+--++++. ..-....+ ....+..|.++||||.||..|
T Consensus 176 vtegVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~-GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G 248 (388)
T COG0156 176 VTEGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPN-GRGLAEHFGLEPEEVDIIVGTLGKALGSSG 248 (388)
T ss_pred EEeccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCC-CccHHHHhCCCCccceEEEEEchhhhcccC
Confidence 76666666776655 66779999999999999999998888532 11111122 111345899999999998543
No 263
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.26 E-value=1e-10 Score=101.44 Aligned_cols=161 Identities=16% Similarity=0.247 Sum_probs=102.8
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEE-eCCCCCChHHHH----------H
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYL-SQPTYGNHPNFF----------A 155 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli-~~P~y~~~~~~~----------~ 155 (280)
|-+.|.+..|+.+... +.++=-+..+||+||.++ ++++++|||+++. ...-|.....+. +
T Consensus 55 GRd~le~iyA~vfgaE-------~ALVRpq~vSGTHAi~~~--Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~ 125 (403)
T PF06838_consen 55 GRDKLERIYADVFGAE-------DALVRPQFVSGTHAIALA--LFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLK 125 (403)
T ss_dssp HHHHHHHHHHHHCT-S-------EEEEETTS-SHHHHHHHH--HHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTG
T ss_pred cHHHHHHHHHHHhCch-------hhhhcccccchHHHHHHH--HHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChH
Confidence 4455555566654322 222223456789999999 9999999999875 556787777775 4
Q ss_pred HcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh--CCceeEEcccCCC
Q 023599 156 AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRL--KRLLPFFDCAYQG 233 (280)
Q Consensus 156 ~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~--~~~~ii~De~y~~ 233 (280)
.+|+...++++ .++..+|++.++++++++++ ++++.-+.-.-+-..++.++++++++++++ .+++|++|++|.+
T Consensus 126 e~Gi~Y~~v~L--~~dg~~D~~~i~~~~~~~tk--~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGE 201 (403)
T PF06838_consen 126 EFGIKYREVPL--TEDGTIDWEAIKKALKPNTK--MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGE 201 (403)
T ss_dssp GGT-EEEE--B---TTSSB-HHHHHHHHHTTEE--EEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTT
T ss_pred HhCceeEEEee--cCCCCcCHHHHHHhhccCce--EEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcce
Confidence 57888999999 34468999999999996543 566666666666667899999999999997 5689999999999
Q ss_pred cccCcCCChhHHHHhhhcCCeEEEEeccccccccccc
Q 023599 234 FVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGE 270 (280)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 270 (280)
|+...+ ..+.+..+ ..+|+-|+.| .|+
T Consensus 202 FvE~~E--------P~~vGADl-~aGSLIKNpG-Ggi 228 (403)
T PF06838_consen 202 FVETQE--------PTEVGADL-MAGSLIKNPG-GGI 228 (403)
T ss_dssp TTSSS---------GGGGT-SE-EEEETTSGGG-TTT
T ss_pred eccccC--------ccccchhh-eeccceeCCC-CCc
Confidence 998521 12333444 4999999997 554
No 264
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.25 E-value=9.1e-11 Score=91.98 Aligned_cols=65 Identities=14% Similarity=0.192 Sum_probs=58.0
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCC--ccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC
Q 023599 81 EYLPITGLPEFNKLSAKLIFGADS--PAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN 149 (280)
Q Consensus 81 ~y~~~~G~~~lr~~ia~~l~~~~~--~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~ 149 (280)
.|.+..|.++||+++|+|+.+..+ ..+.+++|++ |+|++++++++ +..++.+||.|+++.|+|+.
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivv--t~Ga~~al~~l--~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVL--SAGATAANEII--MFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEE--cCCHHHHHHHH--HHHHcCCCCEEEEeCCCCCC
Confidence 488899999999999999977655 4567899998 99999999999 88889999999999999973
No 265
>PRK02769 histidine decarboxylase; Provisional
Probab=99.25 E-value=1e-09 Score=98.91 Aligned_cols=151 Identities=15% Similarity=0.201 Sum_probs=108.8
Q ss_pred cccchhHHHHHHHHHH--hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEE
Q 023599 117 CLSGSGSLRIGADFLA--KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLL 194 (280)
Q Consensus 117 t~g~~~al~~~~~~~~--~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~ 194 (280)
|+|||+++..+ +.. -..++++|++++-.+......++.+|.+...++. + +++.+|++.|++++.+++.++++|+
T Consensus 90 TsGgTean~~a--~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~-~-~~g~id~~~L~~~i~~~~~~t~lvv 165 (380)
T PRK02769 90 TNGGTEGNLYG--CYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITS-L-PNGEIDYDDLISKIKENKNQPPIIF 165 (380)
T ss_pred ecChHHHHHHH--HHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceecc-C-CCCcCcHHHHHHHHHhCCCCcEEEE
Confidence 99999997766 332 2357889999998998888889999999888988 3 3567999999999987644566899
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhCC---ceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccc
Q 023599 195 QASGHNPTGIDPTAQQWEQIRQLMRLKR---LLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGER 271 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~~~~~~~~---~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 271 (280)
.+.++|+||.+-+. ++|.++|+++| +++.+|.+++.+.........+ ..+.. +... +..|.-|.++ .-..
T Consensus 166 ~t~gtt~tG~idpi---~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~-~d~~~-~vDs-is~s~HK~~~-~P~g 238 (380)
T PRK02769 166 ANIGTTMTGAIDNI---KEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP-FSFAD-GIDS-IAISGHKFIG-SPMP 238 (380)
T ss_pred EEeCCCCCcccCCH---HHHHHHHHHhCCCceEEEEEecccceeecccCcccc-CCccC-CCCE-EEECCcccCC-CCCC
Confidence 99999999998875 55678889998 7999999998865421111100 11111 2233 3567778776 3455
Q ss_pred cceEEEE
Q 023599 272 VGALSVV 278 (280)
Q Consensus 272 vG~~v~~ 278 (280)
+|.+.+.
T Consensus 239 ~G~l~~r 245 (380)
T PRK02769 239 CGIVLAK 245 (380)
T ss_pred cEEEEEe
Confidence 7766554
No 266
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.22 E-value=3.7e-10 Score=103.30 Aligned_cols=163 Identities=15% Similarity=0.082 Sum_probs=101.5
Q ss_pred CHHHHH----HHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCCh-HHHHHH--cCCe
Q 023599 88 LPEFNK----LSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNH-PNFFAA--AGLA 160 (280)
Q Consensus 88 ~~~lr~----~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~-~~~~~~--~G~~ 160 (280)
...|.+ .+++++.. +..++ .+++|+.|+.++ +.+++.+||+|++...+|... ..-++. .+..
T Consensus 72 ~~~lE~~~~~~la~l~g~--------~~alv-~~~SG~~A~~~~--l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~ 140 (416)
T PRK13034 72 VDEVEALAIERAKQLFGC--------DYANV-QPHSGSQANGAV--YLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKW 140 (416)
T ss_pred HHHHHHHHHHHHHHHhCC--------CceEE-ecCCcHHHHHHH--HHHhcCCCCEEEEcCccceeeeecCCcceeccce
Confidence 456666 77777532 33322 268899999999 888899999999999888652 111110 1111
Q ss_pred e--eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 161 M--KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 161 ~--~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
. ..++. +..++.+|++.+++.+... ++++|++..+. +|... ++.+|.++|+++|+++|+|+++.-.....
T Consensus 141 ~~~~~~~~-~~~~~~~d~~~le~~l~~~--~~klVi~~~~~--~g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~ 212 (416)
T PRK13034 141 YNAVQYGV-DRLTGLIDYDEVEELAKEH--KPKLIIAGFSA--YPREL---DFARFREIADEVGALLMVDMAHIAGLVAA 212 (416)
T ss_pred eeeEEccc-ccccCCcCHHHHHHHHhhc--CCeEEEECCCc--ccccc---CHHHHHHHHHHcCCEEEEeCcccccCccc
Confidence 1 23443 3445678999999988543 22366664444 34333 57777888999999999999976654421
Q ss_pred CCChhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
.... ..+ ..--++++|++|.++.+. -|+++.
T Consensus 213 g~~~---~~~---~~~Di~~~s~~K~l~g~~--GG~v~~ 243 (416)
T PRK13034 213 GEHP---NPF---PHAHVVTTTTHKTLRGPR--GGMILT 243 (416)
T ss_pred CCCC---CCC---CCceEEEEeCcccCCCCC--CeEEEE
Confidence 1110 111 123477999999995332 355543
No 267
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.21 E-value=6.9e-10 Score=100.72 Aligned_cols=139 Identities=12% Similarity=0.055 Sum_probs=103.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC-hHHHHHHcC
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN-HPNFFAAAG 158 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~-~~~~~~~~G 158 (280)
-.|...+....|.+++++++.. +.++. +++|+.|++++ +...+++||+| +..++.. ....+...|
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~--------e~aV~--v~sGTaAl~ll--~~l~v~pGd~V--p~n~~f~Tt~ahI~~~G 137 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGF--------KHVVP--THQGRGAENLL--SRIAIKPGQYV--PGNMYFTTTRYHQELNG 137 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCC--------CeEEE--eCCHHHHHHHH--HHhCCCCcCEE--CCccchHhhHHHHHhCC
Confidence 4588888899999999999632 44555 99999999987 55557899975 4333332 233356678
Q ss_pred CeeeEEEe--------ecCCCCCcCHHHHHHHHhcCC-CCcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHhCCceeEEc
Q 023599 159 LAMKTYHY--------YDPKTNGLDFQGMLQDLGAAP-SGAIVLLQASGHNPT-GIDPTAQQWEQIRQLMRLKRLLPFFD 228 (280)
Q Consensus 159 ~~~~~v~~--------~~~~~~~~d~~~l~~~~~~~~-~~~~~v~~~~p~NPT-G~~~~~~~l~~i~~~~~~~~~~ii~D 228 (280)
+..+.+.. .++.++.+|++.+++++.+++ .+..++++.+++|-. |+.+|.++++++.++|++||+.||+|
T Consensus 138 a~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 138 GIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred cEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 75544431 124568899999999998652 233356666688998 79999999999999999999999999
Q ss_pred ccCC
Q 023599 229 CAYQ 232 (280)
Q Consensus 229 e~y~ 232 (280)
.+..
T Consensus 218 aAra 221 (460)
T PRK13237 218 ATRC 221 (460)
T ss_pred Ccch
Confidence 9874
No 268
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.21 E-value=1.4e-09 Score=100.12 Aligned_cols=222 Identities=11% Similarity=0.067 Sum_probs=121.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCC-CCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADK-EYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...||+..|.....-|+ -.+..++++.+++.+ ..... .........+|.+.++++.-. ..+.+.+ ++
T Consensus 41 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~q~~~-~~~~~~~~~~~~~~~~la~~L~~~~~~------~~~~v~f--~~ 110 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGH-RHPKVVQAIKEQADK-LMHGPSGVIYYESILKLAEELAEITPG------GLDCFFF--SN 110 (433)
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHh-ccCccccccCCHHHHHHHHHHHHhCCC------CCCEEEE--eC
Confidence 4567889887742122221 223344444444431 11010 111122234555555554311 1256666 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-HcC--------C-----eeeEEEeecCCC--CC--------c
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AAG--------L-----AMKTYHYYDPKT--NG--------L 174 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~G--------~-----~~~~v~~~~~~~--~~--------~ 174 (280)
+|++|.+.+.++........+|+..+-+|.+...... ..+ . .+..+|..+... .+ -
T Consensus 111 SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (433)
T PRK08117 111 SGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLE 190 (433)
T ss_pred cHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHH
Confidence 9999999995443322223678888888866433221 111 0 112233211000 00 1
Q ss_pred CHHHHHHHHhc--CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc
Q 023599 175 DFQGMLQDLGA--APSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD 251 (280)
Q Consensus 175 d~~~l~~~~~~--~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 251 (280)
+++.+++.+.+ ...+..+|++..-..-.|.+ .+.+.+++|.++|++||+++|+||+|..|..... ......+ +.
T Consensus 191 ~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~--~~~~~~~-gv 267 (433)
T PRK08117 191 CLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE--WFAAQTF-GV 267 (433)
T ss_pred HHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc--chhHhhc-CC
Confidence 55667777653 22334566655544445655 4788899999999999999999999998755321 1111111 11
Q ss_pred CCeEEEEecccccccccccccceEEEE
Q 023599 252 GGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 252 ~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..-+.+|||.++ .|+++|+++..
T Consensus 268 ---~pDi~t~sK~lg-~G~pigav~~~ 290 (433)
T PRK08117 268 ---VPDIMTIAKGIA-SGLPLSAVVAS 290 (433)
T ss_pred ---CCCEeehhhhcc-CCCcceeEEEc
Confidence 122579999999 89999988764
No 269
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.17 E-value=9.3e-10 Score=108.73 Aligned_cols=165 Identities=13% Similarity=0.122 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHhCCCCccccCCCeEEeecccch----hHHHHHHHHHHhhcC-CC----EEEEeCCCCCChHHHHHHcCC
Q 023599 89 PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGS----GSLRIGADFLAKHYY-QH----TVYLSQPTYGNHPNFFAAAGL 159 (280)
Q Consensus 89 ~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~----~al~~~~~~~~~~~~-Gd----~Vli~~P~y~~~~~~~~~~G~ 159 (280)
.++|+.+++++ + .++|.+ +++++ .++.++ +.++.++ || +|+++...++.....+...|+
T Consensus 571 ~~~r~~la~i~-g-------~~~v~f--~pnaga~ge~a~~~v--i~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~ 638 (993)
T PLN02414 571 EDLGDLLCEIT-G-------FDSFSL--QPNAGAAGEYAGLMV--IRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGM 638 (993)
T ss_pred HHHHHHHHHHh-C-------CCeEEE--cCCCcHHHHHHHHHH--HHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCC
Confidence 45777777774 2 277777 88877 788888 6777765 88 899999999888888888999
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
+++.+++ + +++.+|+++|++++.+++++.++|++++|+|-+|... ++++|+++|+++|+++++|.++.--....
T Consensus 639 ~vv~v~~-d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~---~I~eI~~iah~~Galv~vDgAq~~a~~~l- 712 (993)
T PLN02414 639 KIVVVGT-D-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEE---GIDEICDIIHDNGGQVYMDGANMNAQVGL- 712 (993)
T ss_pred EEEEecc-C-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccc---hHHHHHHHHHHcCCEEEEEecCHHhccCc-
Confidence 9999998 4 4568999999999987654567899999999998754 47888999999999999999973322110
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccc----cccccceEEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGL----YGERVGALSVV 278 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~RvG~~v~~ 278 (280)
....+.+..+ +.+|.-|+|+. .|=.+|++.+.
T Consensus 713 ------~~p~~~GaD~-~~~s~HK~f~~P~G~GGPg~G~l~~~ 748 (993)
T PLN02414 713 ------TSPGFIGADV-CHLNLHKTFCIPHGGGGPGMGPIGVK 748 (993)
T ss_pred ------CCccccCCCE-EEecCCccCCcCcccCCCCeeeEEEc
Confidence 0111223334 46678887652 23446766553
No 270
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.15 E-value=2e-09 Score=95.70 Aligned_cols=137 Identities=12% Similarity=0.012 Sum_probs=103.9
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC--hHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEE
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN--HPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLL 194 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~--~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~ 194 (280)
+.+|+.+++++ +.+++.|||+|++..-+..+ +.++++.+|++++.+.. +++..+|++.+++++.+++. ..+|.
T Consensus 62 ~gsGt~amEAa--v~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~~~-~~~V~ 136 (383)
T COG0075 62 SGSGTLAMEAA--VASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEV--EWGEAVDPEEVEEALDKDPD-IKAVA 136 (383)
T ss_pred cCCcHHHHHHH--HHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcCCC-ccEEE
Confidence 88899999999 88999999999999887744 57888999999999987 56778999999999996643 33666
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccc-ccc
Q 023599 195 QASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGL-YGE 270 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~ 270 (280)
+.+.-.+||... ++++|+++|++|+.++|+|.+-+--..+ ....+.+-.++ +.+-=|.++. ||+
T Consensus 137 ~vH~ETSTGvln---pl~~I~~~~k~~g~l~iVDaVsS~Gg~~--------~~vd~wgiDv~-itgSQK~l~~PPGl 201 (383)
T COG0075 137 VVHNETSTGVLN---PLKEIAKAAKEHGALLIVDAVSSLGGEP--------LKVDEWGIDVA-ITGSQKALGAPPGL 201 (383)
T ss_pred EEeccCcccccC---cHHHHHHHHHHcCCEEEEEecccCCCcc--------cchhhcCccEE-EecCchhccCCCcc
Confidence 655667888765 5778899999999999999986533322 11222333444 6666788865 553
No 271
>PLN03032 serine decarboxylase; Provisional
Probab=99.14 E-value=1e-09 Score=98.42 Aligned_cols=176 Identities=13% Similarity=0.082 Sum_probs=114.5
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCe--EEeecccchhHHHHHHHHHHhh--cCCCEEEEeCCCCCChHHHHHHcCCeeeE
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRV--STVQCLSGSGSLRIGADFLAKH--YYQHTVYLSQPTYGNHPNFFAAAGLAMKT 163 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i--~~v~t~g~~~al~~~~~~~~~~--~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~ 163 (280)
..++.+.+.+++...-+ .+++++ .+ |+|||+|+..+ +.... .++..|+++.-.+......++.+|..+..
T Consensus 64 a~~~e~~v~~~ia~llg--~~~~~~~G~f--TsGGTEaNl~a--l~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~ 137 (374)
T PLN03032 64 SRQFEVGVLDWFARLWE--LEKDEYWGYI--TTCGTEGNLHG--ILVGREVFPDGILYASRESHYSVFKAARMYRMEAVK 137 (374)
T ss_pred HHHHHHHHHHHHHHHhC--CCCccCCEEE--eCchHHHHHHH--HHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeE
Confidence 34444444444322211 123555 55 99999999888 44322 35568888888888888888889999999
Q ss_pred EEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCC-----ceeEEcccCCCcccCc
Q 023599 164 YHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKR-----LLPFFDCAYQGFVMNM 238 (280)
Q Consensus 164 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~-----~~ii~De~y~~~~~~~ 238 (280)
+|. + .++.+|++.|++++.+++.++.+++.+..+|+||.+-+ +++|.++|+++| +|+.+|.+|+.+....
T Consensus 138 V~~-d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~ 212 (374)
T PLN03032 138 VPT-L-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMPF 212 (374)
T ss_pred eee-C-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhc
Confidence 998 3 45689999999999876545668888889999999865 556688888886 5999999997653321
Q ss_pred CCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
....+. ..+. .+... ..-|.-|..+ .-.-+|.+.+.
T Consensus 213 ~~~~~~-~~~~-~~vDS-is~s~HK~~g-~P~g~G~ll~r 248 (374)
T PLN03032 213 VSRAPE-VTFR-KPIGS-VSVSGHKFLG-CPMPCGVALTR 248 (374)
T ss_pred cCCCcc-cCCC-cCCcE-EEECcccccC-CCcCeEEEEEE
Confidence 000000 1110 11122 3556778665 34455655543
No 272
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.12 E-value=9.2e-09 Score=94.03 Aligned_cols=155 Identities=10% Similarity=0.015 Sum_probs=98.0
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH-cCC------------eeeEEEeecCCC-CCcCHHHHHHH
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA-AGL------------AMKTYHYYDPKT-NGLDFQGMLQD 182 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~-~G~------------~~~~v~~~~~~~-~~~d~~~l~~~ 182 (280)
+++|++|.+.+.++........+|+...-+|.+....... .|. .+..+|..+... ..-+++.+++.
T Consensus 105 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 184 (412)
T TIGR02407 105 GPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKL 184 (412)
T ss_pred CCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHH
Confidence 5899999999955443332336788888888776433321 111 122333210000 00246778888
Q ss_pred HhcCC---CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEE
Q 023599 183 LGAAP---SGAIVLLQASGHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVA 258 (280)
Q Consensus 183 ~~~~~---~~~~~v~~~~p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~ 258 (280)
+.+.. ++..+|++..-+++.|. ..+.+.+++|.++|++||+++|+||++..|.--. .... ....+..+.++
T Consensus 185 ~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG--~~~a-~~~~~v~PDi~-- 259 (412)
T TIGR02407 185 LEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG--TFFS-FEPAGIEPDIV-- 259 (412)
T ss_pred HHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--hhHH-hcccCCCCCEE--
Confidence 76432 23456777777888998 6799999999999999999999999998663211 0111 11112223433
Q ss_pred eccccccccc-ccccceEEEE
Q 023599 259 QSYSKTMGLY-GERVGALSVV 278 (280)
Q Consensus 259 ~S~SK~~~~~-G~RvG~~v~~ 278 (280)
++||.++ + |+|+||+++.
T Consensus 260 -~~~K~lg-~~G~pigav~~~ 278 (412)
T TIGR02407 260 -CLSKSIS-GYGLPLALTLIK 278 (412)
T ss_pred -Eechhcc-CCccceeEEEEc
Confidence 5789998 7 9999999875
No 273
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.12 E-value=1.6e-08 Score=93.31 Aligned_cols=223 Identities=13% Similarity=0.060 Sum_probs=120.8
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCC-CCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADK-EYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...+|+..|.....-|+ -.+..+++..+++.+ ....+ .+.+. +.+..+|+.+............+++ .++
T Consensus 37 dG~~ylD~~~g~~~~~lGh-~~p~i~~ai~~q~~~-~~~~~~~~~~~----~~~~~lae~L~~~~p~~~~~~~~~f-~~~ 109 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGH-NHPNMKQKILDYLQS-GLPLHTLDLTT----PLKDAFIEALLNIIPKRKMDYKLQF-PGP 109 (442)
T ss_pred CCCEEEEccccHhhhcCCC-CCHHHHHHHHHHHHh-ccCccccccCc----HHHHHHHHHHHHhCCCcCCCccEEE-eCC
Confidence 4567899987753222232 233444444444441 11011 11222 3344444444332110000123332 268
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHc-C------------CeeeEEEeecCCCCCc--------CH-
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAA-G------------LAMKTYHYYDPKTNGL--------DF- 176 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~-G------------~~~~~v~~~~~~~~~~--------d~- 176 (280)
+|++|.+.+.++........+|+...-+|.+........ | ..+..++. ++.... +.
T Consensus 110 sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 110 SGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPY--PHEYRCPFGIGGEAGSN 187 (442)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCC--CccccccccCCchhHHH
Confidence 999999999554433323367888888887765443322 1 01223332 111111 11
Q ss_pred ---HHHHHHHhc---C-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhh
Q 023599 177 ---QGMLQDLGA---A-PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFV 249 (280)
Q Consensus 177 ---~~l~~~~~~---~-~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 249 (280)
+.+++.+.. . .+..++++-+.++|+.....+++-++++.++|++||+++|.||++..|.... .......+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG--~~~a~~~~- 264 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG--TMFAFEHA- 264 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC--chhHHHHc-
Confidence 223333321 1 2234455555555665566899999999999999999999999999986532 22222222
Q ss_pred hcCCeEEEEecccccccccccccceEEEE
Q 023599 250 ADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 250 ~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+..+++++ +||.++. |+++|++++.
T Consensus 265 gv~PDiv~---~gK~l~~-G~Pigav~~~ 289 (442)
T TIGR00709 265 GIEPDFVV---MSKAVGG-GLPLAVLLIA 289 (442)
T ss_pred CCCCcEEE---EcccccC-CcccEEEEEc
Confidence 33345555 7999995 9999999875
No 274
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.11 E-value=4.7e-09 Score=96.30 Aligned_cols=224 Identities=10% Similarity=-0.036 Sum_probs=123.1
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|.....-|+. .+..++++.+++. ......+.. . ..+.+..+++.+...... ..+.+.+ +++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~--~~~~~~~~~-~-~~~~~~~la~~l~~~~p~--~~~~v~f--~~s 110 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHN-HPYIDQAIREQLD--RLDHVIFAG-F-THEPAERLAQRLVALTPG--GLDHVFF--SDS 110 (423)
T ss_pred CCCEEEEcchhHHhccCCCC-CHHHHHHHHHHHh--hCCCccccc-c-CCHHHHHHHHHHHHhCCC--CCCEEEE--eCC
Confidence 45678999877431222322 2333344444443 111111100 0 112334445544332110 1257777 999
Q ss_pred chhHHHHHHHHHHhh----c-CC-CEEEEeCCCCCChHHHHHHcCC-------------eeeEEEeecCCCCCcCHHHHH
Q 023599 120 GSGSLRIGADFLAKH----Y-YQ-HTVYLSQPTYGNHPNFFAAAGL-------------AMKTYHYYDPKTNGLDFQGML 180 (280)
Q Consensus 120 ~~~al~~~~~~~~~~----~-~G-d~Vli~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l~ 180 (280)
|++|.+.+.++.... . +| .+|+...-+|.+.......... .+..++..+.+....+.+.++
T Consensus 111 GseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~ 190 (423)
T PRK05964 111 GSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALE 190 (423)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHH
Confidence 999999995544322 1 34 5788888888765433222111 122333310100011278888
Q ss_pred HHHhcCCCCcEEEEecC-CCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEE
Q 023599 181 QDLGAAPSGAIVLLQAS-GHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVA 258 (280)
Q Consensus 181 ~~~~~~~~~~~~v~~~~-p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~ 258 (280)
+.+.+.+++..+|++.. .+...|... +.+.+++|.++|++||+++|+||++..+.... .... ....+.... +
T Consensus 191 ~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G--~~~a-~~~~~v~pD---i 264 (423)
T PRK05964 191 ALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG--TLFA-CEQAGVSPD---I 264 (423)
T ss_pred HHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc--chhH-HHhcCCCCC---e
Confidence 88865544444555543 467778766 89999999999999999999999998775432 1111 111122223 3
Q ss_pred ecccccccccccccceEEEE
Q 023599 259 QSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 259 ~S~SK~~~~~G~RvG~~v~~ 278 (280)
-++||.++..++++|+++..
T Consensus 265 ~~~~K~l~gG~~p~~av~~~ 284 (423)
T PRK05964 265 MCLSKGLTGGYLPLAATLCT 284 (423)
T ss_pred eeeehhhhcCcccceEEEEc
Confidence 47789997444899997654
No 275
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.11 E-value=2.5e-09 Score=92.70 Aligned_cols=195 Identities=13% Similarity=0.038 Sum_probs=121.2
Q ss_pred cchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCE
Q 023599 60 LLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHT 139 (280)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~ 139 (280)
.+.+.+.+++.+.. ......|+...-...+.+.+++.+ ++ +.+++ +++||++..++ +.+.++||+.
T Consensus 11 g~~~~m~eam~~a~--~~~~~~YG~D~~~~~~e~~~ae~~-g~-------~a~~F--v~sGT~aN~la--l~~~~~~~~~ 76 (342)
T COG2008 11 GPTPEMREALAAAN--AVGDDVYGEDPTTNALEQRIAELF-GK-------EAALF--VPSGTQANQLA--LAAHCQPGES 76 (342)
T ss_pred CCCHHHHHHHHhcc--ccCCCCCCCCHHHHHHHHHHHHHh-CC-------ceEEE--ecCccHHHHHH--HHHhcCCCCe
Confidence 45566665555433 233345666555566666666654 21 55666 99999999999 8888999999
Q ss_pred EEEeCCCCCChH--HHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC----CCCcEEEEecCCCCCCCCCCCHHHHHH
Q 023599 140 VYLSQPTYGNHP--NFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA----PSGAIVLLQASGHNPTGIDPTAQQWEQ 213 (280)
Q Consensus 140 Vli~~P~y~~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~----~~~~~~v~~~~p~NPTG~~~~~~~l~~ 213 (280)
|++-.-.+.... .....++ .+..++..+..+..+++++++..+... ...+.+++ .|.+|--|++++++++++
T Consensus 77 vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~-e~~~te~GtVy~l~el~~ 154 (342)
T COG2008 77 VICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVL-ENTATEGGTVYPLDELEA 154 (342)
T ss_pred EEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEE-eeccCCCceecCHHHHHH
Confidence 999876553211 1111122 223333323456789999999988742 23333444 444446699999999999
Q ss_pred HHHHHHhCCceeEEcccCCCc--ccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 214 IRQLMRLKRLLPFFDCAYQGF--VMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 214 i~~~~~~~~~~ii~De~y~~~--~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
|.++|+++|+.+..|-+-..- ... ..+. ..+. .+-.++ .-++||..+.| +|-+++.+
T Consensus 155 i~~~~k~~~l~LHmDGAR~~nA~val-g~~~---~~~~-~~~D~v-~~~~tK~g~~~---~gAiv~gn 213 (342)
T COG2008 155 ISAVCKEHGLPLHMDGARLANALVAL-GVAL---KTIK-SYVDSV-SFCLTKGGGAP---VGAIVFGN 213 (342)
T ss_pred HHHHHHHhCCceeechHHHHHHHHHc-CCCH---HHHH-hhCCEE-EEecccCCcce---eeeEEEcC
Confidence 999999999999999874221 111 1122 2221 223455 45689987655 67776653
No 276
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.10 E-value=2.1e-08 Score=92.00 Aligned_cols=157 Identities=11% Similarity=0.061 Sum_probs=97.0
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHc----------CC---eeeEEEeecCCC-CCcCHHHHHHH
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAA----------GL---AMKTYHYYDPKT-NGLDFQGMLQD 182 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~----------G~---~~~~v~~~~~~~-~~~d~~~l~~~ 182 (280)
+++|++|.+.+..+........+|+...-+|.+........ +. .+..+|..+... ..-|++.+++.
T Consensus 109 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 188 (425)
T PRK09264 109 GPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKL 188 (425)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHH
Confidence 57999999999554433323367888888887754322211 11 233344311000 01267888888
Q ss_pred HhcCC---CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEE
Q 023599 183 LGAAP---SGAIVLLQASGHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVA 258 (280)
Q Consensus 183 ~~~~~---~~~~~v~~~~p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~ 258 (280)
+.+.. .+..+|++..-..-.|. ..+.+.+++|.++|++||+++|+||++..|.... ...... ..+..+++
T Consensus 189 l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG--~~~~~~-~~~v~PDi--- 262 (425)
T PRK09264 189 LEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG--TFFSFE-RAGITPDI--- 262 (425)
T ss_pred HHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc--HHHHHh-hcCCCCCE---
Confidence 86431 23445555554555665 5689999999999999999999999998764321 111111 11223344
Q ss_pred ecccccccccccccceEEEEc
Q 023599 259 QSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 259 ~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.++||.++..|+++|++++..
T Consensus 263 ~t~~K~l~~~G~pigav~~~~ 283 (425)
T PRK09264 263 VTLSKSISGYGLPMALVLIKP 283 (425)
T ss_pred EEeccccCCCccceEEEEEch
Confidence 466899995599999998864
No 277
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.10 E-value=2.7e-09 Score=97.61 Aligned_cols=117 Identities=13% Similarity=0.136 Sum_probs=91.1
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh--------cCC-----CEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCH
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH--------YYQ-----HTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDF 176 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~--------~~G-----d~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 176 (280)
+++....|+||++|+.++ +.+.. ..| ..|++++-.+......++.+|+++..+|. +++++.+|+
T Consensus 100 ~~~~g~~TsGgTEAn~~a--l~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~-d~~~~~vd~ 176 (431)
T TIGR01788 100 AEAVGTSTIGSSEAIMLG--GLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPM-DPGRYVIDP 176 (431)
T ss_pred CCCeEEEechHHHHHHHH--HHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEec-CCCceeeCH
Confidence 345544489999999988 43321 112 36888888888888888889999999998 454457999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhC------CceeEEcccCCCcc
Q 023599 177 QGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLK------RLLPFFDCAYQGFV 235 (280)
Q Consensus 177 ~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~------~~~ii~De~y~~~~ 235 (280)
+.|++++.+++. +|+.+..||.||.+.+. ++|+++|+++ ++++.+|.+|+.+.
T Consensus 177 ~~L~~~i~~~t~---lV~~t~g~t~tG~idpi---~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~ 235 (431)
T TIGR01788 177 EQVVEAVDENTI---GVVCILGTTYTGEYEDV---KALNDALDEYNAKTGWDIPIHVDAASGGFI 235 (431)
T ss_pred HHHHHHHhhCCe---EEEEEeCCCCCcccCCH---HHHHHHHHHHHhhhCCCceEEEecccHHHH
Confidence 999999987643 88888899999998875 5557788888 89999999998543
No 278
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.04 E-value=1.1e-09 Score=98.75 Aligned_cols=175 Identities=14% Similarity=0.091 Sum_probs=113.0
Q ss_pred CCCC-HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeE
Q 023599 85 ITGL-PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKT 163 (280)
Q Consensus 85 ~~G~-~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~ 163 (280)
+.|. .+..+..|+.+ +.+ +-.++ ++|+|.++.++ +++.+.+||+|+++.-++......+...|+++++
T Consensus 64 p~G~I~eAe~~aA~~f-GAd------~t~fl--vnGsT~g~~a~--i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvy 132 (417)
T PF01276_consen 64 PEGIIKEAEELAARAF-GAD------KTFFL--VNGSTSGNQAM--IMALCRPGDKVLVDRNCHKSVYNALILSGAIPVY 132 (417)
T ss_dssp TBTHHHHHHHHHHHHH-TES------EEEEE--SSHHHHHHHHH--HHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEE
T ss_pred CccHHHHHHHHHHHhc-CCC------eEEEE--ecCchHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEE
Confidence 3444 45555555554 432 22344 99999999999 8999999999999999998777788889999999
Q ss_pred EEeecCC-C--CCcCH-----HHHHHHHhcCCCCc--EEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC
Q 023599 164 YHYYDPK-T--NGLDF-----QGMLQDLGAAPSGA--IVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG 233 (280)
Q Consensus 164 v~~~~~~-~--~~~d~-----~~l~~~~~~~~~~~--~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~ 233 (280)
++-.+++ + .+++. +.+++++.+++..+ .++++++|+ --|.+.+ +++|+++|+++++.|++||+|+.
T Consensus 133 i~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PT-Y~Gv~~d---i~~I~~~~h~~~~~llvDEAhGa 208 (417)
T PF01276_consen 133 IPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPT-YYGVCYD---IKEIAEICHKHGIPLLVDEAHGA 208 (417)
T ss_dssp EEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE----HHHHHHHHCCTECEEEEE-TT-T
T ss_pred ecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCC-CCeEEEC---HHHHHHHhcccCCEEEEEccccc
Confidence 8763222 1 34566 99999998875432 246665553 4566664 67779999999999999999965
Q ss_pred c-ccCcCCChhHHHHhhh--cCCeEEEEecccccccccccccceEEE
Q 023599 234 F-VMNMDADALPVRMFVA--DGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 234 ~-~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
. .|. ..+...+..-.+ ....++++.|+-|++ +++.-+-++-
T Consensus 209 h~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh 252 (417)
T PF01276_consen 209 HFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLH 252 (417)
T ss_dssp TGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEE
T ss_pred cccCC-CCccchhhccCccccccceeeeechhhcc--cccccceEEE
Confidence 4 333 111111111111 123789999999997 5777665543
No 279
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.04 E-value=3.8e-08 Score=89.47 Aligned_cols=217 Identities=13% Similarity=0.002 Sum_probs=125.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+||..|.-.+.-|+. .+..+++..+++. +. .+.+ .....+....+++++..... .+.+++ +++
T Consensus 34 dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~--~~-~~~~--~~~~~~~~~~la~~l~~~~~----~~~v~f--~~S 101 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAE--KL-INPS--PAFYNEPMAKLAGLLTQHSC----FDKVFF--ANS 101 (395)
T ss_pred CCCEEEECCcChhhccCCCC-CHHHHHHHHHHHH--hc-cccc--ccccCHHHHHHHHHHhhccC----CCEEEE--eCC
Confidence 45678999876431223433 3334444444443 11 1111 11234567778888754321 267777 999
Q ss_pred chhHHHHHHHHHHhh----cCC-CEEEEeCCCCCChHHH-HHHcCCee---eEEEeecCC--CCCcCHHHHHHHHhcCCC
Q 023599 120 GSGSLRIGADFLAKH----YYQ-HTVYLSQPTYGNHPNF-FAAAGLAM---KTYHYYDPK--TNGLDFQGMLQDLGAAPS 188 (280)
Q Consensus 120 ~~~al~~~~~~~~~~----~~G-d~Vli~~P~y~~~~~~-~~~~G~~~---~~v~~~~~~--~~~~d~~~l~~~~~~~~~ 188 (280)
|++|.+.+..+.... .+| .+|+..+.+|.+.... +...|... .+.|....- ....|++.+++.+.++
T Consensus 102 GseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 179 (395)
T PRK03715 102 GAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDK-- 179 (395)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCC--
Confidence 999999994443321 134 5788888888765333 22233211 111110000 0014788888888543
Q ss_pred CcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccc
Q 023599 189 GAIVLLQASGHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGL 267 (280)
Q Consensus 189 ~~~~v~~~~p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 267 (280)
.++|++...++..|... +.+.+++|.++|++||+++|.||++..|.-.. .... ....+.... +.+|||.++
T Consensus 180 -~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG--~~~a-~~~~gv~PD---i~t~gK~lg- 251 (395)
T PRK03715 180 -TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG--TLFA-YELSGIEPD---IMTLGKGIG- 251 (395)
T ss_pred -ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc--chhh-HhhcCCCCc---eeeehhhhh-
Confidence 33666665555666654 68889999999999999999999998763321 1111 111122234 357799998
Q ss_pred cccccceEEEE
Q 023599 268 YGERVGALSVV 278 (280)
Q Consensus 268 ~G~RvG~~v~~ 278 (280)
.|+-+|.+++.
T Consensus 252 ~G~p~~av~~~ 262 (395)
T PRK03715 252 GGVPLAALLAK 262 (395)
T ss_pred CCcceEEEEEc
Confidence 68888887654
No 280
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.03 E-value=6.9e-09 Score=95.29 Aligned_cols=206 Identities=18% Similarity=0.136 Sum_probs=127.1
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCC-----CCCC-CCC---CHHHHHHHHHHHhCCCCccccCCCe
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADK-----EYLP-ITG---LPEFNKLSAKLIFGADSPAIKENRV 112 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~y~~-~~G---~~~lr~~ia~~l~~~~~~~~~~~~i 112 (280)
.+.|+|=.++ | ...+.+..+......++. .. +|+. ... ++.+....++.+++... .|+
T Consensus 49 ~~~l~LiasE----N---~~s~~v~~a~~s~l~nky-aeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~-----anv 115 (493)
T PRK13580 49 RSSLKLIASE----N---YSSLAVQLAMGNLLTDKY-AEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEH-----AYV 115 (493)
T ss_pred hcCceEeccc----c---cCCHHHHHHhcccccccC-cCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCc-----ccc
Confidence 4668887666 5 455555555444332221 12 2322 222 23344444444665432 333
Q ss_pred EEeecccchhHHHHHHHHHHhhcC-------------------------------CCEEEEeCCCCCChHHH-----HHH
Q 023599 113 STVQCLSGSGSLRIGADFLAKHYY-------------------------------QHTVYLSQPTYGNHPNF-----FAA 156 (280)
Q Consensus 113 ~~v~t~g~~~al~~~~~~~~~~~~-------------------------------Gd~Vli~~P~y~~~~~~-----~~~ 156 (280)
+..+|+.|...+ +.+++.| ||+|+..++..+++... +..
T Consensus 116 ---qp~Sg~~An~~v--~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~ 190 (493)
T PRK13580 116 ---QPHSGADANLVA--FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISG 190 (493)
T ss_pred ---cCCCcHHHHHHH--HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhh
Confidence 478889999999 8888876 89999998877665322 222
Q ss_pred cCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 157 AGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 157 ~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
...+.+.+++ +++++.+|++.+++.+.+.++ .++++..+|-.+ .. ++++|.++|+++|+++++|+++.--..
T Consensus 191 ~~~~~~~y~v-d~~~g~iD~d~l~~~~~~~~p---lvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gli 262 (493)
T PRK13580 191 KMFHQRSYGV-DPDTGLLDYDEIAALAREFKP---LILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLV 262 (493)
T ss_pred heeeeEeccc-CcccCccCHHHHHHHHhhcCC---EEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhcee
Confidence 2356677777 555678999999999987755 555556666644 44 477778889999999999999977655
Q ss_pred CcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 237 NMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
........ ....+ +.+ ++++|++|++. |-+-|++.+.
T Consensus 263 gg~~~~~~-~~~~~-~~D-~vtgT~hKaL~--GP~GG~I~~~ 299 (493)
T PRK13580 263 AGKVFTGD-EDPVP-HAD-IVTTTTHKTLR--GPRGGLVLAK 299 (493)
T ss_pred ccccchhh-cCCCC-CCc-EEEeCChhhcc--CCCeEEEEec
Confidence 32110000 00111 123 67999999983 4456777664
No 281
>PLN02263 serine decarboxylase
Probab=99.03 E-value=9e-09 Score=94.22 Aligned_cols=139 Identities=12% Similarity=0.024 Sum_probs=106.4
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCC--eEEeecccchhHHHHHHHHHHh--hcCCCEEEEeCCCCCChHHHHHHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENR--VSTVQCLSGSGSLRIGADFLAK--HYYQHTVYLSQPTYGNHPNFFAAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~--i~~v~t~g~~~al~~~~~~~~~--~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~ 162 (280)
+..++.+.+.+|+...-+.+ +++ =.+ |+|||+++..+ +..- ..+...|++++-.+......++.+|++++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p--~~~~~G~v--tsGGTEaNL~A--l~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~ 203 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIE--KNEYWGYI--TNCGTEGNLHG--ILVGREVFPDGILYASRESHYSVFKAARMYRMECV 203 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCC--CCCCeEEE--eCcHHHHHHHH--HHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcce
Confidence 56778888888865443321 222 233 99999999888 4432 22334788888888888899999999999
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCc-----eeEEcccCCCccc
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRL-----LPFFDCAYQGFVM 236 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~-----~ii~De~y~~~~~ 236 (280)
.+|. .+++.+|++.|++++.+++.++.+|+.+-++-+||.+ +++++|.++|+++|+ |+-+|.+|+.+..
T Consensus 204 ~Vp~--d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~l 277 (470)
T PLN02263 204 KVDT--LVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMM 277 (470)
T ss_pred Eecc--CCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHh
Confidence 9998 3567899999999998776567788888899999975 557777888999886 9999999988754
No 282
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.02 E-value=5.6e-08 Score=89.73 Aligned_cols=221 Identities=13% Similarity=0.048 Sum_probs=117.5
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...||+..|.-...-|+ -.++.++++.+++. .. ..+....+..+.+..+++.+....... ..+.+.+ +++
T Consensus 54 dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~--~~--~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f--~~s 125 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGN-SAPRVVEAVREQVA--RF--THTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSAL--FNS 125 (443)
T ss_pred CCCEEEEcCcchhhhccCC-CCHHHHHHHHHHHH--hc--cCccccccCCHHHHHHHHHHHHhCCCC-CCCEEEE--eCC
Confidence 3456788877642111222 12333444444443 21 112222223345555555554332110 0145666 888
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHc-CC-------------eeeEEEeecCCC----CCcC------
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAA-GL-------------AMKTYHYYDPKT----NGLD------ 175 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~----~~~d------ 175 (280)
|++|.+.+.++.......++|+....+|.+........ +. .+..++.....+ ...+
T Consensus 126 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (443)
T PRK06058 126 GAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAA 205 (443)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHH
Confidence 89999999554433333478999999998875443321 10 112222100100 0011
Q ss_pred --HHHHHHHHhcCCCCcEEEEecCCCCCCCCC--CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc
Q 023599 176 --FQGMLQDLGAAPSGAIVLLQASGHNPTGID--PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD 251 (280)
Q Consensus 176 --~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~--~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 251 (280)
++.+++.+. +.+..+++ ..|-+..|-+ .+.+-+++|.++|++||+++|.||++..|.... ..+. ....+.
T Consensus 206 ~~~~~l~~~~~--~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG--~~fa-~~~~gv 279 (443)
T PRK06058 206 RAITVIEKQVG--ADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTG--AWFA-CEHEGI 279 (443)
T ss_pred HHHHHHHHhhC--CCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCh--hhhH-HHhcCC
Confidence 122222221 22333444 4566666543 358889999999999999999999999885432 1111 122233
Q ss_pred CCeEEEEecccccccccccccceEEEE
Q 023599 252 GGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 252 ~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.++++++ +|.++ .|+++|+++..
T Consensus 280 ~PDiv~~---gK~l~-~G~Pi~av~~~ 302 (443)
T PRK06058 280 VPDLITT---AKGIA-GGLPLSAVTGR 302 (443)
T ss_pred CCCEEEE---ccccc-CCCccEEEEEc
Confidence 3455544 79999 89999999875
No 283
>PRK06541 hypothetical protein; Provisional
Probab=98.97 E-value=1.1e-07 Score=88.04 Aligned_cols=161 Identities=16% Similarity=0.099 Sum_probs=98.5
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh----c-CC-CEEEEeCCCCCChHHHHHHc-CC------------eeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH----Y-YQ-HTVYLSQPTYGNHPNFFAAA-GL------------AMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~----~-~G-d~Vli~~P~y~~~~~~~~~~-G~------------~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+..+.... . +| .+|+...-+|.+........ |. .+..+|..+..
T Consensus 113 ~~v~f--~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~ 190 (460)
T PRK06541 113 NRVFF--TTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFY 190 (460)
T ss_pred CEEEE--cCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccc
Confidence 57777 999999999985443322 1 22 67888888886654322211 11 12223321000
Q ss_pred C---CCcC--------HHHHHHHHhcC-CCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 171 T---NGLD--------FQGMLQDLGAA-PSGAIVLLQASGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 171 ~---~~~d--------~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
. ++-+ ++.+++.+... ++..++|++..-+++.|.+.+ .+-+++|.++|++||+++|.||++..|.--
T Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~ 270 (460)
T PRK06541 191 RAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRL 270 (460)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC
Confidence 0 1112 36677777542 233455555545899998865 888999999999999999999999777321
Q ss_pred cCCChhHHHHhhhcCCeEEEEeccccccccccc-ccceEEEEc
Q 023599 238 MDADALPVRMFVADGGECLVAQSYSKTMGLYGE-RVGALSVVR 279 (280)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~~~ 279 (280)
. ...... ..+..++++ +|||.++ .|+ ++|++++..
T Consensus 271 G--~~~a~~-~~gv~PDiv---t~gK~l~-~G~~pigav~~~~ 306 (460)
T PRK06541 271 G--EMFGCE-RFGYVPDII---TCAKGIT-SGYSPLGAMIASD 306 (460)
T ss_pred c--hhhhhh-hcCCCCCEE---Eeccccc-CCccceeEEEEcH
Confidence 1 111111 112233544 4899998 897 999998753
No 284
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.96 E-value=1.6e-07 Score=86.67 Aligned_cols=160 Identities=15% Similarity=0.100 Sum_probs=97.0
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-HcCC-------------eeeEEEeecCCC--CC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AAGL-------------AMKTYHYYDPKT--NG 173 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~G~-------------~~~~v~~~~~~~--~~ 173 (280)
+.+.+ +++|++|.+.+.++........+|+...-+|.+...... ..+. .+..+|..+... +.
T Consensus 104 ~~v~f--~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 181 (445)
T PRK08593 104 KRVTF--GLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYE 181 (445)
T ss_pred CEEEE--CCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCcccccccc
Confidence 46777 999999999995443322223578888888876533222 1111 122333211100 00
Q ss_pred -cC-------HHHHHHHHhcC--CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 174 -LD-------FQGMLQDLGAA--PSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 174 -~d-------~~~l~~~~~~~--~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.+ ++.+++.+... ..+..+|++.......|.. .+.+-+++|.++|++||+++|.||++..|.... ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG--~~ 259 (445)
T PRK08593 182 EPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTG--KW 259 (445)
T ss_pred CCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc--hH
Confidence 11 24444444321 2345677777777777876 688899999999999999999999998774421 11
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.....+ +..+. +-+++|.++ .|+++|++++.
T Consensus 260 ~a~~~~-gv~pD---i~t~gK~l~-~G~p~gav~~~ 290 (445)
T PRK08593 260 SSISHF-NITPD---LMSFGKSLA-GGMPMSAIVGR 290 (445)
T ss_pred HHHHhc-CCCCC---Eeeeccccc-CCcccEEEEEc
Confidence 111111 22234 347899998 78999998875
No 285
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.95 E-value=3.5e-08 Score=90.84 Aligned_cols=181 Identities=13% Similarity=0.125 Sum_probs=124.6
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHH-hhc--C---C------CEEEEeCCCCCChHHHH
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLA-KHY--Y---Q------HTVYLSQPTYGNHPNFF 154 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~-~~~--~---G------d~Vli~~P~y~~~~~~~ 154 (280)
+...+.+.+..++...-+.+ +...-..|.|||+++.++..... ... . + .+|+++.-.+..+...+
T Consensus 98 ~a~~~E~~~v~~l~~l~~~~---~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa 174 (460)
T COG0076 98 AAAELEERVVNMLSDLLGAP---EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAA 174 (460)
T ss_pred hHHHHHHHHHHHHHHHhCCC---CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHH
Confidence 66777777777754443322 22221229999999997722111 111 1 1 16899988888899999
Q ss_pred HHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCc
Q 023599 155 AAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGF 234 (280)
Q Consensus 155 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~ 234 (280)
+.+|+....+++ ++.++.+|++++++++.+++... +|+-+-++-+||. .+++++|.++|+++++++.+|.+|+.+
T Consensus 175 ~~lG~~~~~v~~-~~~~~~id~~~l~~~i~~~t~~g-~vV~~aGtT~~G~---iDdi~~ia~ia~~~~i~lHVDAA~GG~ 249 (460)
T COG0076 175 RYLGLGLRRVPT-VPTDYRIDVDALEEAIDENTIGG-VVVGTAGTTDTGS---IDDIEELADIAEEYGIWLHVDAAFGGF 249 (460)
T ss_pred HHhCCCceeEEe-ccCccccCHHHHHHHHHhhccCc-eEEEEecCCCCCc---cCCHHHHHHHHHHcCCcEEEEccccce
Confidence 999999999998 44478999999999999886533 4666678899985 567899999999999999999999998
Q ss_pred ccCcCCChhHHHHhhhc-CCeEEEEecccccccccccccceEEEEc
Q 023599 235 VMNMDADALPVRMFVAD-GGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 235 ~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.......... ..+ .. ....| .-|+-|.. ++=.-+||+.+.+
T Consensus 250 ~~pf~~~~~~-~~f-~l~~vdSI-t~d~HK~g-~aP~~~G~il~rd 291 (460)
T COG0076 250 LLPFLEPDGR-WDF-GLEGVDSI-TVDGHKYG-LAPIGCGVVLFRD 291 (460)
T ss_pred eecccCccch-hhc-CCCCceEE-EECccccc-CCCCCceEEEEEC
Confidence 7621111111 011 11 12333 56788866 4678888887754
No 286
>PRK15029 arginine decarboxylase; Provisional
Probab=98.91 E-value=2e-08 Score=96.84 Aligned_cols=177 Identities=15% Similarity=0.084 Sum_probs=117.7
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCee
Q 023599 82 YLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAM 161 (280)
Q Consensus 82 y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~ 161 (280)
+.|..-+.+..+..|+. ++.+ .-.++ ++|+|.++.++ +++.+.+||+|+++.-++-...+.+...|+++
T Consensus 201 ~~p~G~I~eAq~~aA~~-fgA~------~t~Fl--vNGST~gn~a~--i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~P 269 (755)
T PRK15029 201 LDHTGAFGESEKYAARV-FGAD------RSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLILTGAKP 269 (755)
T ss_pred CCCCcHHHHHHHHHHHH-hCCC------cEEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeE
Confidence 33443344555555554 4432 22344 99999999988 88999999999999999988888888899999
Q ss_pred eEEEee-cCCC--CCcC-----HHHHHHHHhcCCC-------CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeE
Q 023599 162 KTYHYY-DPKT--NGLD-----FQGMLQDLGAAPS-------GAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPF 226 (280)
Q Consensus 162 ~~v~~~-~~~~--~~~d-----~~~l~~~~~~~~~-------~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii 226 (280)
+++.-. +..+ .+++ .+.+++++++++. ++.++++++|+ --|.+.+ +++|+++|+++++.|+
T Consensus 270 vyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~d---i~~I~~~~h~~~~~ll 345 (755)
T PRK15029 270 VYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYN---AKEAQDLLEKTSDRLH 345 (755)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeC---HHHHHHHHHhcCCeEE
Confidence 998531 1111 3344 8899999976642 22367776553 4577665 6677899999999999
Q ss_pred EcccCCCc-ccCcCCCh-hHHHH--hhhcCCeEEEEecccccccccccccceE
Q 023599 227 FDCAYQGF-VMNMDADA-LPVRM--FVADGGECLVAQSYSKTMGLYGERVGAL 275 (280)
Q Consensus 227 ~De~y~~~-~~~~~~~~-~~~~~--~~~~~~~~i~~~S~SK~~~~~G~RvG~~ 275 (280)
+||+|+.. .|.+.-+. .++.. ....+..++++.|.-|++ |++.-|-+
T Consensus 346 vDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~ 396 (755)
T PRK15029 346 FDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASY 396 (755)
T ss_pred EECccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhh
Confidence 99999654 44321111 11100 011345679999999997 46665544
No 287
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.91 E-value=7.2e-08 Score=89.25 Aligned_cols=163 Identities=14% Similarity=0.068 Sum_probs=100.6
Q ss_pred HHHHHHHHHhCCCCccccCCCeEE-eecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH----------cCC
Q 023599 91 FNKLSAKLIFGADSPAIKENRVST-VQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA----------AGL 159 (280)
Q Consensus 91 lr~~ia~~l~~~~~~~~~~~~i~~-v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~----------~G~ 159 (280)
.|+.+++++... ++++.+ ++++||+++..++ +.+++.+||+|++....++.+...... .+.
T Consensus 85 ar~~~a~lf~a~------~~~~~~~~~~~sgt~an~~v--~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~ 156 (452)
T PTZ00094 85 CQKRALEAFGLD------PEEWGVNVQPYSGSPANFAV--YTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYF 156 (452)
T ss_pred HHHHHHHHhCCC------cccceeecCCCchHHHHHHH--HHHhcCCCCEEEecccccCCcccccccccccccccceeee
Confidence 344666665332 244433 2247899999998 778888999999987776655433211 112
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcC
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMD 239 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~ 239 (280)
++..++. +. ++.+|++.+++.+.+... + ++++. ++.+|...+. ++|.++|+++|+++++|+++.--....+
T Consensus 157 ~~~~~~~-~~-~g~id~~~L~~~l~~~~~-~-lvi~~--~s~~g~~~di---~~I~~i~~~~ga~l~vDaaq~~G~i~~~ 227 (452)
T PTZ00094 157 ESLPYQV-NE-KGLIDYDKLEELAKAFRP-K-LIIAG--ASAYPRDIDY---KRFREICDSVGAYLMADIAHTSGLVAAG 227 (452)
T ss_pred eeeeccc-CC-CCCcCHHHHHHHHHHhCC-C-EEEEe--CCCCCCccCH---HHHHHHHHHcCCEEEEeccchhccccCC
Confidence 3334444 33 367999999999965322 2 44443 3448877765 4557789999999999999866544211
Q ss_pred CChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 240 ADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
....+ + . +.. +++.|..|+++ |-+-|++.+.
T Consensus 228 ~~~~~---~-~-~~D-~l~~S~hK~l~--GP~Gg~l~~~ 258 (452)
T PTZ00094 228 VLPSP---F-P-YAD-VVTTTTHKSLR--GPRSGLIFYR 258 (452)
T ss_pred CCCCC---C-C-CCc-EEEcCCccCCC--CCCceEEEEe
Confidence 10000 1 1 123 66999999874 3344776653
No 288
>PLN02271 serine hydroxymethyltransferase
Probab=98.90 E-value=9e-08 Score=88.72 Aligned_cols=145 Identities=14% Similarity=0.159 Sum_probs=100.0
Q ss_pred eecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH---------HHcCCeeeEEE--eecCCCCCcCHHHHHHHH
Q 023599 115 VQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF---------AAAGLAMKTYH--YYDPKTNGLDFQGMLQDL 183 (280)
Q Consensus 115 v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~---------~~~G~~~~~v~--~~~~~~~~~d~~~l~~~~ 183 (280)
|+..+|+.|..++ +.+++.|||+|+..+..++++.... ...|..+..++ + +++++.+|.+++++..
T Consensus 218 VQp~SGs~AN~aV--~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~-d~~~g~IDyd~lek~a 294 (586)
T PLN02271 218 VQPYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKV-NPQTGYIDYDKLEEKA 294 (586)
T ss_pred eeeccHHHHHHHH--HHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccc-ccccCccCHHHHHHHh
Confidence 3477889999999 8899999999999999998876543 23454444444 5 4566789999999954
Q ss_pred -hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccc
Q 023599 184 -GAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYS 262 (280)
Q Consensus 184 -~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 262 (280)
..+++ +|++..-.||. .+ +++++.++|+++|+++++|.++..-...... .+ +..+ +.+ ++.+|..
T Consensus 295 ~~~rPK---LII~g~Saypr--~~---D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~-~~---sP~~-~aD-vvt~TTH 360 (586)
T PLN02271 295 LDFRPK---ILICGGSSYPR--EW---DYARFRQIADKCGAVLMCDMAHISGLVAAKE-CV---NPFD-YCD-IVTSTTH 360 (586)
T ss_pred hhcCCe---EEEECchhccC--cC---CHHHHHHHHHHcCCEEEEECcccccccccCc-CC---CCCc-CCc-EEEeCCc
Confidence 33333 77776667772 33 4667788999999999999998554432111 10 0111 123 6789999
Q ss_pred ccccccccccceEEEE
Q 023599 263 KTMGLYGERVGALSVV 278 (280)
Q Consensus 263 K~~~~~G~RvG~~v~~ 278 (280)
|++. |=|-|.+.+.
T Consensus 361 KtLr--GPrGG~I~~r 374 (586)
T PLN02271 361 KSLR--GPRGGIIFYR 374 (586)
T ss_pred ccCC--CCCceEEEec
Confidence 9983 5566877663
No 289
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.88 E-value=2e-07 Score=83.66 Aligned_cols=208 Identities=13% Similarity=0.081 Sum_probs=120.0
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+|+..|.-...-|+ -.++.+++..+++.+ ........+.....+|.+.++++. + .+.+.+ +++
T Consensus 22 dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~-~~~~~~~~~~~~~~~la~~l~~~~-~-------~~~v~~--~~S 89 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGH-NHPEWVEEMSEQLEK-LVVAGPMFEHEEKEEMLEELSKWV-N-------YEYVYM--GNS 89 (364)
T ss_pred CCCEEEEcccChhhccCCC-CCHHHHHHHHHHHHh-cCCccCCcCCHHHHHHHHHHHhhc-C-------CCEEEE--eCc
Confidence 4567899977642122232 123344444444441 111111112223345666666653 1 156676 999
Q ss_pred chhHHHHHHHHHHhhcCC-CEEEEeCCCCCChHHHHHH--------cCCe-----eeEEEeecCCCCCcCHHHHHHHHhc
Q 023599 120 GSGSLRIGADFLAKHYYQ-HTVYLSQPTYGNHPNFFAA--------AGLA-----MKTYHYYDPKTNGLDFQGMLQDLGA 185 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~G-d~Vli~~P~y~~~~~~~~~--------~G~~-----~~~v~~~~~~~~~~d~~~l~~~~~~ 185 (280)
|++|++++..+.... .| ++|+...-+|.+....... .+.. +..++. .|.+.+++.+.+
T Consensus 90 GseA~e~Alklar~~-~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~ 161 (364)
T PRK04013 90 GTEAVEAALKFARLY-TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVEAAKEAITK 161 (364)
T ss_pred hHHHHHHHHHHHHHH-hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHHHHHHHhcC
Confidence 999999995544333 45 8999999989775433222 1111 112221 267888888764
Q ss_pred CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 186 APSGAIVLLQASGHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 186 ~~~~~~~v~~~~p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
+ ..++++..-+.-.|. ..+.+-++++.++|++||+++|+||+...+... ...... ..+..++++ .++|.
T Consensus 162 ~---~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG---~~~a~~-~~gv~PDiv---~~gK~ 231 (364)
T PRK04013 162 E---TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTG---KFLAIE-HYKVEPDIV---TMGKG 231 (364)
T ss_pred C---cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCC---chhHHH-hcCCCCCEE---Eeccc
Confidence 3 335665544443444 346677999999999999999999999877322 121212 123334555 44999
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
++ .|+-+|.++..
T Consensus 232 lg-gG~P~~a~~~~ 244 (364)
T PRK04013 232 IG-NGVPVSLTLTN 244 (364)
T ss_pred cc-CCceeEEEEec
Confidence 98 58888877654
No 290
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.86 E-value=5.9e-07 Score=82.83 Aligned_cols=159 Identities=13% Similarity=0.107 Sum_probs=94.8
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHc-CC-------------eeeEEEeecCCCCC--
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAA-GL-------------AMKTYHYYDPKTNG-- 173 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~~~-- 173 (280)
+.+.+ +++|++|.+.+.++.......++|+...-+|.+........ |. .+..++. ++.+.
T Consensus 116 ~~v~f--~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 191 (441)
T PRK05769 116 KKVFF--TNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPY--PNPYRNP 191 (441)
T ss_pred CEEEE--CCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCC--Ccccccc
Confidence 56777 99999999999554433323367888888887765333221 11 1222332 11100
Q ss_pred ---c--------CHHHHHHHH-hc--CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 174 ---L--------DFQGMLQDL-GA--APSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 174 ---~--------d~~~l~~~~-~~--~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
- +.+.+++.+ ++ .+.+..+|++..-..-.|.. .+.+.+++|.++|++||+++|.||++..|....
T Consensus 192 ~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G 271 (441)
T PRK05769 192 WGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTG 271 (441)
T ss_pred ccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence 0 123455523 22 22344555555444445664 457789999999999999999999998764422
Q ss_pred CCChhHHHHhhhcCCeEEEEecccccccccccccceEEEEc
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.......+ +..++++ +|||.++ .|+++|++++.+
T Consensus 272 --~~~a~~~~-gv~pDiv---t~~K~l~-~G~p~gav~~~~ 305 (441)
T PRK05769 272 --KMFAIEHF-GVEPDII---TLAKAIA-GGLPLGAVIGRA 305 (441)
T ss_pred --ceehhhcc-CCCCCEE---EEccccc-CCcccEEEEEeh
Confidence 11111111 2223554 4899998 799999988653
No 291
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.85 E-value=7.8e-08 Score=81.36 Aligned_cols=158 Identities=15% Similarity=0.215 Sum_probs=108.2
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEe-CCCCCChHHH----------HH
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLS-QPTYGNHPNF----------FA 155 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~-~P~y~~~~~~----------~~ 155 (280)
|-..|.+-.|+.+... ..++-.+..+|++|+.++ ++.+++|||+.+.. .--|.....+ ++
T Consensus 66 GRdtLe~vyA~vf~aE-------~a~VRpq~isGTHAI~~a--Lfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~ 136 (416)
T COG4100 66 GRDTLERVYAQVFGAE-------AALVRPQIISGTHAIACA--LFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLK 136 (416)
T ss_pred chhHHHHHHHHHhccc-------cceeeeeeecchhHHHHH--HHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHH
Confidence 4555666666665332 223334567889999999 99999999987655 3445545444 45
Q ss_pred HcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh--CCceeEEcccCCC
Q 023599 156 AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRL--KRLLPFFDCAYQG 233 (280)
Q Consensus 156 ~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~--~~~~ii~De~y~~ 233 (280)
.+|+....+|+ ..+..+|.+.+++.+.++++ .+.+.-+...-.--.++.+++++++++.++ .|+++++|++|.+
T Consensus 137 dfgi~Y~~v~L--t~~gkiD~~~v~~~i~~~tk--li~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE 212 (416)
T COG4100 137 DFGIKYKAVPL--TADGKIDIQAVKTAISDRTK--LIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE 212 (416)
T ss_pred HhCcceeeccc--ccCCcccHHHHHHhcCccce--EEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence 67788888888 33457999999999998765 344444433333334889999999999997 4699999999999
Q ss_pred cccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 234 FVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
|+...+.- ..+..+ .-+|+-|+-|
T Consensus 213 FvE~~EPt--------~vGaDl-iAGSLIKNpG 236 (416)
T COG4100 213 FVEEKEPT--------HVGADL-IAGSLIKNPG 236 (416)
T ss_pred hhhccCcc--------ccchhh-hccceeeCCC
Confidence 99752211 112233 3678888766
No 292
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=98.84 E-value=2.2e-07 Score=86.19 Aligned_cols=146 Identities=18% Similarity=0.207 Sum_probs=89.6
Q ss_pred eecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH-HHHcC-----Cee--e--EEEeecCCCCCcCHHHHHHHHh
Q 023599 115 VQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF-FAAAG-----LAM--K--TYHYYDPKTNGLDFQGMLQDLG 184 (280)
Q Consensus 115 v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~-~~~~G-----~~~--~--~v~~~~~~~~~~d~~~l~~~~~ 184 (280)
++.++|+.|+..+ +.+++.|||+|+..+...+++... ....| ... . .+.. +.+++.+|++.+++++.
T Consensus 104 v~~~SG~~AN~av--~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~-~~~~g~iD~d~Le~~l~ 180 (475)
T PLN03226 104 VQPLSGSPANFAV--YTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL-DESTGLIDYDKLEKKAM 180 (475)
T ss_pred cCcCchHHHHHHH--HHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee-cCCCCCcCHHHHHHHHh
Confidence 4568889999999 889999999999865433223221 11111 111 1 3333 44567899999999987
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 185 AAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
+... .+++.. .++ +|...+ +++|.++|+++|+++++|+++.--.........+ + + +.+ ++++|++|+
T Consensus 181 ~~~p--klIv~~-~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p---~-~-~~D-iv~~t~hK~ 247 (475)
T PLN03226 181 LFRP--KLIIAG-ASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASP---F-E-YCD-VVTTTTHKS 247 (475)
T ss_pred hcCC--eEEEEe-cCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC---C-C-CCe-EEEecCccc
Confidence 5422 244432 233 555444 5577899999999999999886544321111001 1 1 123 668999999
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
++ |-+-|++.+.
T Consensus 248 L~--GP~Gg~I~~~ 259 (475)
T PLN03226 248 LR--GPRGGMIFFR 259 (475)
T ss_pred cc--CCCceEEEEc
Confidence 83 3344776653
No 293
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.82 E-value=6.5e-08 Score=86.75 Aligned_cols=154 Identities=12% Similarity=-0.014 Sum_probs=96.5
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeeccc-chhHHHHHHHHHHhhc---CCCEEEEeCCCCCChHHHHHHcCCeeeE
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLS-GSGSLRIGADFLAKHY---YQHTVYLSQPTYGNHPNFFAAAGLAMKT 163 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g-~~~al~~~~~~~~~~~---~Gd~Vli~~P~y~~~~~~~~~~G~~~~~ 163 (280)
..+.|+.+++++... .++++++ |.| +|++++++ +.+++. +||.|++ .|........++..|++++.
T Consensus 46 ~~~~r~~l~~l~~~~-----~~~~vvf--~~gs~T~a~~~~--~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~ 115 (355)
T cd00611 46 VNEAESDLRELLNIP-----DNYKVLF--LQGGATGQFAAV--PLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVI 115 (355)
T ss_pred HHHHHHHHHHHhCCC-----CCceEEE--EcCCchHHHHHH--HHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEE
Confidence 456788888886432 1367777 877 99999999 777766 4455543 22222223367788999999
Q ss_pred EEeecCCCCCc-C-HHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 164 YHYYDPKTNGL-D-FQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 164 v~~~~~~~~~~-d-~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
++. +++. .+ + .+..+..+.++++ +|.+++..|.||..++ ++++.+|+++++|.+..-....-+
T Consensus 116 ~~~-~~~g-~~~~~~~~~~~~~~~~~~---lV~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs~g~~~id-- 180 (355)
T cd00611 116 VAA-KEEG-KYTKIPDVETWDLAPDAA---YVHYCSNETIHGVEFD--------EVPDTGGVPLVADMSSNILSRPID-- 180 (355)
T ss_pred Eec-cccc-CCCCCCCHhhcCCCCCCC---EEEEeCCcccccEEcc--------eecccCCCeEEEEccccccCCCCC--
Confidence 987 3221 12 3 2222233333333 7888899999998632 344569999999998766554321
Q ss_pred hhHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
+.+. . +.+.|.-|.+|.+| +|.+++
T Consensus 181 ------v~~~--~-~~~ss~~K~lGP~G--~g~l~~ 205 (355)
T cd00611 181 ------VSKF--G-VIYAGAQKNLGPAG--VTVVIV 205 (355)
T ss_pred ------HHHh--C-EEEeecccccCCCc--eEEEEE
Confidence 1111 2 35566799998665 555554
No 294
>PLN02590 probable tyrosine decarboxylase
Probab=98.79 E-value=1.4e-07 Score=88.36 Aligned_cols=149 Identities=12% Similarity=0.097 Sum_probs=104.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccc-----CCCeEEeecccchhHHHHHHHHHHh----hc-------CCCEEEEe
Q 023599 80 KEYLPITGLPEFNKLSAKLIFGADSPAIK-----ENRVSTVQCLSGSGSLRIGADFLAK----HY-------YQHTVYLS 143 (280)
Q Consensus 80 ~~y~~~~G~~~lr~~ia~~l~~~~~~~~~-----~~~i~~v~t~g~~~al~~~~~~~~~----~~-------~Gd~Vli~ 143 (280)
..|...++..++.+.+.+|+...-+.+-. ...=++ ++||++|...+ +.+- .+ +.-.|+++
T Consensus 160 ~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~--~sGgSeAnl~a--l~aAR~~~~~~~g~~~~~~~vvy~S 235 (539)
T PLN02590 160 FTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI--QGTGCEAVLVV--VLAARDRILKKVGKTLLPQLVVYGS 235 (539)
T ss_pred CCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE--cCchHHHHHHH--HHHHHHHHHhhhcccCCCCEEEEec
Confidence 34555667778888888886554433210 011233 89999988766 3321 10 11255566
Q ss_pred CCCCCChHHHHHHcCC---eeeEEEeecC-CCCCcCHHHHHHHHhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHH
Q 023599 144 QPTYGNHPNFFAAAGL---AMKTYHYYDP-KTNGLDFQGMLQDLGAA---PSGAIVLLQASGHNPTGIDPTAQQWEQIRQ 216 (280)
Q Consensus 144 ~P~y~~~~~~~~~~G~---~~~~v~~~~~-~~~~~d~~~l~~~~~~~---~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~ 216 (280)
+-.+......++.+|+ .++.||. +. +++.+|++.|++++.+. ...+.+|+-+-.+-.||.+ +++++|.+
T Consensus 236 ~~aH~Sv~KAa~ilGlg~~~vr~Vp~-d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai---Dpl~~Ia~ 311 (539)
T PLN02590 236 DQTHSSFRKACLIGGIHEENIRLLKT-DSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV---DPLVPLGN 311 (539)
T ss_pred CCchHHHHHHHHHcCCCcccEEEEeC-CCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc---CCHHHHHH
Confidence 6667777888888888 5888898 44 45789999999999753 2346788887788888865 56788899
Q ss_pred HHHhCCceeEEcccCCCccc
Q 023599 217 LMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 217 ~~~~~~~~ii~De~y~~~~~ 236 (280)
+|++|++|+.+|.+|+.+..
T Consensus 312 i~~~~g~WlHVDaA~GG~al 331 (539)
T PLN02590 312 IAKKYGIWLHVDAAYAGNAC 331 (539)
T ss_pred HHHHhCCeEEEecchhhhhh
Confidence 99999999999999988764
No 295
>PLN02880 tyrosine decarboxylase
Probab=98.77 E-value=3.5e-07 Score=85.25 Aligned_cols=183 Identities=12% Similarity=0.077 Sum_probs=118.9
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCcccc-----CCCeEEeecccchhHHHHHHHHHHh----hc-C-----CC-EEEEeCC
Q 023599 82 YLPITGLPEFNKLSAKLIFGADSPAIK-----ENRVSTVQCLSGSGSLRIGADFLAK----HY-Y-----QH-TVYLSQP 145 (280)
Q Consensus 82 y~~~~G~~~lr~~ia~~l~~~~~~~~~-----~~~i~~v~t~g~~~al~~~~~~~~~----~~-~-----Gd-~Vli~~P 145 (280)
|...+...++.+.+.+|+...-+.+-. ...-.+ |+||+++...+ +..- .. . .. .|++++-
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~--tsggs~anl~a--l~~AR~~~~~~~g~~~~~~~vv~~S~~ 189 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI--QGTASEAVLVV--LLAARDRVLRKVGKNALEKLVVYASDQ 189 (490)
T ss_pred cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE--cCccHHHHHHH--HHHHHHHHHHHhcccccCCeEEEEcCC
Confidence 444456778888888886544332210 012234 89999988766 3221 11 1 12 4666766
Q ss_pred CCCChHHHHHHcCCe---eeEEEeecC-CCCCcCHHHHHHHHhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHH
Q 023599 146 TYGNHPNFFAAAGLA---MKTYHYYDP-KTNGLDFQGMLQDLGAA---PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLM 218 (280)
Q Consensus 146 ~y~~~~~~~~~~G~~---~~~v~~~~~-~~~~~d~~~l~~~~~~~---~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~ 218 (280)
.+......+..+|+. ++.||. +. +++.+|++.|++++++. ...+.+|+-+-.+-.||.+-+ +++|+++|
T Consensus 190 aH~Sv~Kaa~~lGlg~~~v~~Vp~-d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~ 265 (490)
T PLN02880 190 THSALQKACQIAGIHPENCRLLKT-DSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIA 265 (490)
T ss_pred chHHHHHHHHHcCCCHHHEEEeec-CCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHH
Confidence 777778888888883 788888 43 45789999999999753 334678888888899998766 56668889
Q ss_pred HhCCceeEEcccCCCcccCcCCChhHHHHhhhc--CCeEEEEecccccccccccccceEEEE
Q 023599 219 RLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD--GGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 219 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
++||+|+.+|.+|+.+..-. +..+...+. ..+. +..++-|.+. .-.-+|.+.+.
T Consensus 266 ~~~~iwlHVDaA~gg~~~~~----~~~~~~l~gie~aDS-it~d~HKwl~-~P~~~g~llvr 321 (490)
T PLN02880 266 KSNGMWFHVDAAYAGSACIC----PEYRHYIDGVEEADS-FNMNAHKWFL-TNFDCSLLWVK 321 (490)
T ss_pred HHcCCEEEEehhhHHHHHhC----HHHHHHhcCchhcCE-EEECchhhcC-CCccEEEEEEe
Confidence 99999999999998875421 011211111 1123 3667788775 56667766654
No 296
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.77 E-value=2.7e-07 Score=78.02 Aligned_cols=166 Identities=13% Similarity=0.122 Sum_probs=114.7
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
..+||-... .+.|.+.+++++.+.. -+ ..-|+.......|.+.+|+.+ ++ |.-++ .++|+.
T Consensus 22 ~~vDLRSDT------vT~PTdeMr~am~eA~--vg-DdVyGeD~tt~rLE~~vA~l~-GK-------EAgLF--v~SGTm 82 (384)
T KOG1368|consen 22 RSVDLRSDT------VTVPTDEMRRAMAEAS--VG-DDVYGEDPTTNRLEQRVAELF-GK-------EAGLF--VPSGTM 82 (384)
T ss_pred ecccccccc------ccCChHHHHHHHhhcc--cC-cccccCCccHHHHHHHHHHHh-Cc-------cceee--eccccc
Confidence 446665533 3467777877776643 12 223555556788999999985 33 33334 555566
Q ss_pred HHHHHHHHHHhhc-CCCEEEEeCCCCC-ChH--HHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC-----CCCcEEE
Q 023599 123 SLRIGADFLAKHY-YQHTVYLSQPTYG-NHP--NFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA-----PSGAIVL 193 (280)
Q Consensus 123 al~~~~~~~~~~~-~Gd~Vli~~P~y~-~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~-----~~~~~~v 193 (280)
+..++ +...+. +|.+|++-+-++. .|+ .+....|+.+.++.- +++..+|+++++.++... -....++
T Consensus 83 gNlla--Im~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ledIe~~ir~~~GD~H~p~T~LI 158 (384)
T KOG1368|consen 83 GNLLA--IMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKN--ENDGTMDLEDIEAAIRVPKGDCHMPPTKLI 158 (384)
T ss_pred ccHHH--HHHHhcCCCceEEeccchheeehhccChhhhccceeEeeee--CCCCeeeHHHHHHhhcCCCCCccCCCceEE
Confidence 66666 555555 9999999886652 222 122234556666653 566789999999999732 1234699
Q ss_pred EecCCCCCCC-CCCCHHHHHHHHHHHHhCCceeEEcccC
Q 023599 194 LQASGHNPTG-IDPTAQQWEQIRQLMRLKRLLPFFDCAY 231 (280)
Q Consensus 194 ~~~~p~NPTG-~~~~~~~l~~i~~~~~~~~~~ii~De~y 231 (280)
++.|-+|-+| .+++.+++.++.+||++|++-+-.|-+-
T Consensus 159 clENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGAR 197 (384)
T KOG1368|consen 159 CLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGAR 197 (384)
T ss_pred EeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhh
Confidence 9999998888 9999999999999999999999999864
No 297
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.75 E-value=1.1e-06 Score=81.46 Aligned_cols=215 Identities=13% Similarity=0.078 Sum_probs=119.7
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
+...||+..|.-...-|+ -.++..+++.+++. ... .+.. ..+....+++.+...-.. .+.+.+ +++|
T Consensus 98 G~~yiD~~~g~g~~~lGh-~~p~v~~av~~ql~--~~~--~~~~---~~~~~~~lAe~l~~~~p~---~~~v~f--~~SG 164 (474)
T PLN02482 98 GNEYIDYVGSWGPAIIGH-ADDEVLAALAETMK--KGT--SFGA---PCLLENVLAEMVIDAVPS---VEMVRF--VNSG 164 (474)
T ss_pred CCEEEEecccccccccCC-CCHHHHHHHHHHHh--hCC--CCCC---CCHHHHHHHHHHHHhCCC---CCEEEE--eCCh
Confidence 456777766642111122 12334444444444 221 1211 113444455554332211 267777 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-Hc--CCe------eeEEEeec-CC----CCCcCHHHHHHHHhcC
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AA--GLA------MKTYHYYD-PK----TNGLDFQGMLQDLGAA 186 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~--G~~------~~~v~~~~-~~----~~~~d~~~l~~~~~~~ 186 (280)
++|.+.+.++.......++|+...-+|.++...+. .. |.. ...++... ++ .+ -|++.+++.+.++
T Consensus 165 sEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~ 243 (474)
T PLN02482 165 TEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEAN 243 (474)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhC
Confidence 99999995544333233678888888877643211 10 000 00000000 00 01 2788999888765
Q ss_pred CCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTM 265 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 265 (280)
.....+|++..-..-.|.+.+ .+-+++|.++|++||+++|.||+...|.... .. .....+...++ .+|+|.+
T Consensus 244 ~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~---~g-a~~~~gv~PDi---~t~gK~l 316 (474)
T PLN02482 244 KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY---GG-AQEYFGITPDL---TTLGKVI 316 (474)
T ss_pred CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc---ch-HhHHhCCCCCE---EEecchh
Confidence 444556666555555676554 6779999999999999999999997763321 11 11222222344 4789999
Q ss_pred cccccccceEEE
Q 023599 266 GLYGERVGALSV 277 (280)
Q Consensus 266 ~~~G~RvG~~v~ 277 (280)
+ .|+-+|.++.
T Consensus 317 g-gG~Pigav~g 327 (474)
T PLN02482 317 G-GGLPVGAYGG 327 (474)
T ss_pred h-CCCceEEEEE
Confidence 8 7888888755
No 298
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.74 E-value=1.7e-06 Score=79.59 Aligned_cols=153 Identities=14% Similarity=0.123 Sum_probs=94.2
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhc--CC-CEEEEeCCCCCChHHHHHHc-CC------------eeeEEEeecCCCCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHY--YQ-HTVYLSQPTYGNHPNFFAAA-GL------------AMKTYHYYDPKTNG 173 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~--~G-d~Vli~~P~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~~ 173 (280)
+.+++ +++|++|.+++.++..... .| .+|+...-+|.+........ |- .+..+|.
T Consensus 135 ~~v~f--~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~------- 205 (442)
T TIGR03372 135 KYSFF--CNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF------- 205 (442)
T ss_pred CEEEE--eCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------
Confidence 45666 9999999999955443321 24 57888888887664333222 11 1122222
Q ss_pred cCHHHHHHHHhc---CCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhh
Q 023599 174 LDFQGMLQDLGA---APSGAIVLLQASGHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFV 249 (280)
Q Consensus 174 ~d~~~l~~~~~~---~~~~~~~v~~~~p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 249 (280)
.|.+.+++.++. ...+..++++..-..--|... +++-++++.++|++||+++|.||+...|.--. ..+.... .
T Consensus 206 ~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG--~~~a~e~-~ 282 (442)
T TIGR03372 206 GDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG--KMFACEH-E 282 (442)
T ss_pred CCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc--cchhhhh-c
Confidence 256777776643 223445666554444456544 57778999999999999999999997663321 1111111 1
Q ss_pred hcCCeEEEEecccccccccc-cccceEEEE
Q 023599 250 ADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 250 ~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
+..++++ +++|.+| .| +-+|.+++.
T Consensus 283 gv~PDiv---t~gK~lg-~G~~Pigavv~~ 308 (442)
T TIGR03372 283 GVQPDIL---CLAKALG-GGVMPIGATIAT 308 (442)
T ss_pred CCCCCee---eehhhhc-CCcccceEEEec
Confidence 2233544 4899998 67 578887754
No 299
>PLN02724 Molybdenum cofactor sulfurase
Probab=98.74 E-value=5.4e-07 Score=89.02 Aligned_cols=172 Identities=12% Similarity=0.048 Sum_probs=106.9
Q ss_pred CHHHHHHHHHHHhCCCCccccCC-CeEEeecccchhHHHHHHHHHHh-hcCCCEEEEeCCCCCChHHH---HHHcCCeee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKEN-RVSTVQCLSGSGSLRIGADFLAK-HYYQHTVYLSQPTYGNHPNF---FAAAGLAMK 162 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~-~i~~v~t~g~~~al~~~~~~~~~-~~~Gd~Vli~~P~y~~~~~~---~~~~G~~~~ 162 (280)
+++.|+.+++++.... ++ +|++ |.|+|+|++++ +.++ +.+||+|++..-.|...... ++..|+++.
T Consensus 80 ~e~aR~~ia~~lga~~-----~~~~VvF--tsnaT~alnlv--a~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~ 150 (805)
T PLN02724 80 IESARQQVLEYFNAPP-----SDYACVF--TSGATAALKLV--GETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAI 150 (805)
T ss_pred HHHHHHHHHHHhCCCc-----cceEEEE--eCChHHHHHHH--HHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEE
Confidence 5678899999874321 13 4566 99999999999 4444 57899999987666554433 345699999
Q ss_pred EEEeecC------CCCCcCH--HHHHHHHh----c---CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhC-----C
Q 023599 163 TYHYYDP------KTNGLDF--QGMLQDLG----A---APSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLK-----R 222 (280)
Q Consensus 163 ~v~~~~~------~~~~~d~--~~l~~~~~----~---~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~-----~ 222 (280)
.++...+ +...++. +.+++.+. . ..++..++.++.-+|-||..++.+.++++.+.+.++ +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 9887211 1112332 55665532 0 012235899999999999999988665544443332 3
Q ss_pred ceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 223 LLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 223 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+++++|.+..--.... + +.+.+.. .+..|+-|.+|.| -.+|.+++.
T Consensus 231 ~~v~vDaaQ~~g~~pi--D------v~~~~~D-fl~~S~HK~~GgP-~G~G~L~vr 276 (805)
T PLN02724 231 WMVLLDAAKGCGTSPP--D------LSRYPAD-FVVVSFYKIFGYP-TGLGALLVR 276 (805)
T ss_pred eEEEeehhhhcCCCCC--C------hhhcCCC-EEEEecceeccCC-CCceEEEEe
Confidence 6799999875443321 1 1112223 4477888988733 236666554
No 300
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.73 E-value=8.5e-07 Score=78.74 Aligned_cols=210 Identities=12% Similarity=0.131 Sum_probs=122.8
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
++...|||..|.--+.-|+ -.+..+++..++...--.....|.. ....+|-+.+++.. . ..+.+++ +++
T Consensus 40 ~G~~YlDf~~Giav~~lGH-~hP~iv~al~~Q~~kl~h~sn~~~~-~~~~~la~~L~~~s----~---~~d~vff--~NS 108 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGH-CHPALVEALKEQAEKLWHVSNLFYN-EPQAELAEKLVELS----P---FADRVFF--CNS 108 (404)
T ss_pred CCCEeeeeccceeeeccCC-CCHHHHHHHHHHHHHhhhcccccCC-hHHHHHHHHHHhhC----c---cccEEEE--cCC
Confidence 4578899988863233332 1233334433333310011112322 22334444444442 1 1488888 999
Q ss_pred chhHHHHHHHHHHhhc--CC-CEEEEeCCCCCChHHHHHHcCC-------------eeeEEEeecCCCCCcCHHHHHHHH
Q 023599 120 GSGSLRIGADFLAKHY--YQ-HTVYLSQPTYGNHPNFFAAAGL-------------AMKTYHYYDPKTNGLDFQGMLQDL 183 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~--~G-d~Vli~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l~~~~ 183 (280)
|++|++.+..+..... ++ .+|+...-+|.+-.-..-..+. .+.++|. -|++.+++++
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai 181 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAI 181 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHh
Confidence 9999999954443333 22 3677776666543211111111 1223333 2899999999
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccc
Q 023599 184 GAAPSGAIVLLQASGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYS 262 (280)
Q Consensus 184 ~~~~~~~~~v~~~~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 262 (280)
.+++ +.|++..-+=--|+..+ .+-++++.++|++||+++|.||+...+.-.. ..+....+ +-.+++ -++.
T Consensus 182 ~~~t---aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG--k~fA~e~~-gV~PDI---~tla 252 (404)
T COG4992 182 DEDT---AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG--KLFAYEHY-GVEPDI---LTLA 252 (404)
T ss_pred ccCe---EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc--hHHHHHHh-CCCCCE---EEee
Confidence 8854 37777766767776655 4557899999999999999999998886532 12222211 222344 4678
Q ss_pred ccccccccccceEEE
Q 023599 263 KTMGLYGERVGALSV 277 (280)
Q Consensus 263 K~~~~~G~RvG~~v~ 277 (280)
|.+| .|+-||.+++
T Consensus 253 K~Lg-GG~PigA~la 266 (404)
T COG4992 253 KALG-GGFPIGAMLA 266 (404)
T ss_pred cccc-CCccceeeEE
Confidence 9998 7899998876
No 301
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.73 E-value=1.3e-07 Score=85.06 Aligned_cols=206 Identities=20% Similarity=0.186 Sum_probs=114.1
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCC---CCC------CHHHHHHHHHHHhCCCCccccCCCe
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLP---ITG------LPEFNKLSAKLIFGADSPAIKENRV 112 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~---~~G------~~~lr~~ia~~l~~~~~~~~~~~~i 112 (280)
...|+|-..+ | ...+.+.++......+.. ..+|+. ..| ++.|....++-+++... .++-
T Consensus 20 ~~~l~LiaSE----N---~~Sp~v~~al~S~l~nky-aeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~----~~w~ 87 (399)
T PF00464_consen 20 RSTLNLIASE----N---YMSPAVREALGSDLTNKY-AEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEP----KEWY 87 (399)
T ss_dssp HHSEE-CTT------------HHHHHHHTSGGGGS--TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-ST----TTEE
T ss_pred hcCccccCcc----c---ccCHHHHHHhCCcceeec-cccCCCcccccCcchhhHHHHHHHHHHHHHhCCCc----ccce
Confidence 3568887666 5 455555554444332221 222211 123 34455555555666541 1233
Q ss_pred EEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH-----H-----HHcCCeeeEEEeecCCCCCcCHHHHHHH
Q 023599 113 STVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF-----F-----AAAGLAMKTYHYYDPKTNGLDFQGMLQD 182 (280)
Q Consensus 113 ~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~-----~-----~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 182 (280)
+-|+..+|+.|..++ +.++++|||+|+..++..++|... . .....+.+.+++ +++++.+|.+++++.
T Consensus 88 anvqp~SGs~An~av--~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~-d~~~~~ID~d~l~~~ 164 (399)
T PF00464_consen 88 ANVQPHSGSQANLAV--YMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPV-DPDTGLIDYDELEKL 164 (399)
T ss_dssp EE---SSHHHHHHHH--HHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHH
T ss_pred EEeecCCchHHHHHH--HHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeee-ecCCCeECHHHHHHH
Confidence 446789999999999 999999999999999888766421 1 223457888888 667889999999999
Q ss_pred HhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCC-CcccCcCCChhHHHHhhhcCCeEEEEecc
Q 023599 183 LGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQ-GFVMNMDADALPVRMFVADGGECLVAQSY 261 (280)
Q Consensus 183 ~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 261 (280)
+.+..+ .+|+..--+.| -.-+++++.++|.+.|.+++.|-++- .|+.... .+ +..+. .+ |+.+|+
T Consensus 165 a~~~kP--klIi~G~S~y~-----~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~--~~---~P~~~-AD-vvt~sT 230 (399)
T PF00464_consen 165 AKEHKP--KLIICGASSYP-----RPIDFKRFREIADEVGAYLMADISHIAGLIAGGL--FP---NPFPY-AD-VVTGST 230 (399)
T ss_dssp HHHH----SEEEEE-SSTS-----S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS--S-----GCCT-SS-EEEEES
T ss_pred HhhcCC--CEEEECchhcc-----CccCHHHHHHHHHhcCcEEEecccccccceehhe--ec---Ccccc-ce-EEEeec
Confidence 876522 25554332322 24568899999999999999999983 2332211 11 11122 23 669999
Q ss_pred cccccccccccceEEEE
Q 023599 262 SKTMGLYGERVGALSVV 278 (280)
Q Consensus 262 SK~~~~~G~RvG~~v~~ 278 (280)
-|+| +|=|-|.+.+-
T Consensus 231 hKtl--~GPrggiI~~~ 245 (399)
T PF00464_consen 231 HKTL--RGPRGGIILTN 245 (399)
T ss_dssp SGGG---SSS-EEEEES
T ss_pred cccc--cccCceEEEEc
Confidence 9998 58898887764
No 302
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.73 E-value=2.7e-07 Score=81.01 Aligned_cols=202 Identities=19% Similarity=0.214 Sum_probs=129.8
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCC----CCCCCCCCCC----CHHHHHHHHHHHhCCCCccccCCCeE
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLS----ADKEYLPITG----LPEFNKLSAKLIFGADSPAIKENRVS 113 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~y~~~~G----~~~lr~~ia~~l~~~~~~~~~~~~i~ 113 (280)
.+.|+|=..+ | ...+.+.++.-....++. -..+|+.-.- ++.|....++.|++... .|+
T Consensus 26 ~~~ieLIASE----N---~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~-----anV- 92 (413)
T COG0112 26 REHIELIASE----N---FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEY-----ANV- 92 (413)
T ss_pred hhceeeeecc----c---cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCc-----ccc-
Confidence 3678887666 6 555666555544443221 1123433222 24455555666777653 343
Q ss_pred EeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH---HcC--CeeeEEEeecCCCCCcCHHHHHHHHhcCCC
Q 023599 114 TVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA---AAG--LAMKTYHYYDPKTNGLDFQGMLQDLGAAPS 188 (280)
Q Consensus 114 ~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~---~~G--~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~ 188 (280)
+..+|++|...+ +++++.|||+|+-.+-..++|...-. ..| .+.+.+++ +.++..+|.|++++...+..+
T Consensus 93 --QPhSGs~AN~av--~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~v-d~et~~IDyD~~~k~a~e~kP 167 (413)
T COG0112 93 --QPHSGSQANQAV--YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGV-DPETGLIDYDEVEKLAKEVKP 167 (413)
T ss_pred --CCCCchHHHHHH--HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccc-ccccCccCHHHHHHHHHHhCC
Confidence 478889999999 99999999999999998888754431 122 46777787 677889999999999887622
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccC-CCcccCcCCChhHHHHhhhcCCeEEEEecccccccc
Q 023599 189 GAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAY-QGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGL 267 (280)
Q Consensus 189 ~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 267 (280)
++++.---.. .-.-+++++.++|.+.|.++++|-++ ..|+.....+ .|+ +. .+ ++.+|.-|+|
T Consensus 168 --K~ii~G~SaY-----~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p-~P~----~~-Ad-vVTtTTHKTl-- 231 (413)
T COG0112 168 --KLIIAGGSAY-----SRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHP-NPL----PH-AD-VVTTTTHKTL-- 231 (413)
T ss_pred --CEEEECcccc-----ccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCC-CCC----Cc-cc-eEeCCcccCC--
Confidence 2555422111 22346888999999999999999998 3333322111 011 11 12 5689999998
Q ss_pred cccccceEEE
Q 023599 268 YGERVGALSV 277 (280)
Q Consensus 268 ~G~RvG~~v~ 277 (280)
.|=|-|.+.+
T Consensus 232 rGPrGG~Il~ 241 (413)
T COG0112 232 RGPRGGIILT 241 (413)
T ss_pred CCCCceEEEe
Confidence 5778887654
No 303
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.73 E-value=2.3e-06 Score=78.75 Aligned_cols=216 Identities=13% Similarity=0.055 Sum_probs=119.4
Q ss_pred CCCCeeEeecceeecCCCCccchH-HHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLN-AVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...||+..|.-...-| ...+ .+++..+++. ...... .+.....+|.+.+++.. . ..+.+.+ ++
T Consensus 51 dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~--~~~~~~-~~~~~~~~la~~l~~~~----p---~~~~v~f--~~ 116 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITG--HAHPHITKAITEAAE--NGVLYG-TPTELEIEFAKMLKEAI----P---SLEKVRF--VN 116 (428)
T ss_pred CCCEEEEccccccccccC--CCCHHHHHHHHHHHH--hCCccC-CCCHHHHHHHHHHHHhC----C---CCcEEEE--eC
Confidence 456788987774211122 2333 3344444443 221111 22222233444444432 1 1267777 99
Q ss_pred cchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-HcCCeee--------EEEe-ecCCC---CCcCHHHHHHHHhc
Q 023599 119 SGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AAGLAMK--------TYHY-YDPKT---NGLDFQGMLQDLGA 185 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~G~~~~--------~v~~-~~~~~---~~~d~~~l~~~~~~ 185 (280)
+|++|.+.+.++........+|+...-+|.+...... ..|.... .++. ..++. ...|++.+++.+.+
T Consensus 117 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 196 (428)
T PRK12389 117 SGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDK 196 (428)
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHh
Confidence 9999999995544333233678888888877543322 2221100 0000 00000 01278899988875
Q ss_pred CCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 186 APSGAIVLLQASGHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 186 ~~~~~~~v~~~~p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
...+..+|++..-..-.|.+. +.+-+++|.++|+++|+++|.||+...|.... .. .....+..+++ -+++|.
T Consensus 197 ~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~---~~-a~~~~gv~PDi---vt~gK~ 269 (428)
T PRK12389 197 WGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMY---GG-AQDLLGVEPDL---TALGKI 269 (428)
T ss_pred cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCc---ch-hhHHhCCCCCe---eeechh
Confidence 444445666655555556554 67789999999999999999999998773211 00 11112223344 377999
Q ss_pred ccccccccceEEE
Q 023599 265 MGLYGERVGALSV 277 (280)
Q Consensus 265 ~~~~G~RvG~~v~ 277 (280)
++ .|+-+|.+++
T Consensus 270 lg-gG~Pi~av~~ 281 (428)
T PRK12389 270 IG-GGLPIGAYGG 281 (428)
T ss_pred hc-CCCceeEEeE
Confidence 97 6888888765
No 304
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.73 E-value=2.7e-07 Score=88.39 Aligned_cols=163 Identities=13% Similarity=0.125 Sum_probs=109.2
Q ss_pred CCC-HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEE
Q 023599 86 TGL-PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTY 164 (280)
Q Consensus 86 ~G~-~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v 164 (280)
.|. .+..+..|+. ++.+ .-..+ ++|++.++.++ +.+.+.+||+|++..-++-...+.+...|++++++
T Consensus 194 ~G~i~eAe~~AA~~-fgAd------~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl 262 (714)
T PRK15400 194 SGPHKEAEEYIARV-FNAD------RSYMV--TNGTSTANKIV--GMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYF 262 (714)
T ss_pred ChHHHHHHHHHHHH-hCCC------cEEEE--eCchHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 344 4555555554 4432 22334 99999999999 88889999999999999877777888899999998
Q ss_pred EeecCCC----CCcC-----HHHHHHHHhcCCC--CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC
Q 023599 165 HYYDPKT----NGLD-----FQGMLQDLGAAPS--GAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG 233 (280)
Q Consensus 165 ~~~~~~~----~~~d-----~~~l~~~~~~~~~--~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~ 233 (280)
.-.- +. .+++ .+.+++++.+++. ++..+++++| +--|.+++.. +|++.|..++ |++||+|..
T Consensus 263 ~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~---~I~~~~~~~~--ilvDEAwga 335 (714)
T PRK15400 263 RPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTD---FIKKTLDVKS--IHFDSAWVP 335 (714)
T ss_pred cccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHH---HHHHHhCCCC--EEEEccchh
Confidence 5421 22 2335 8999999987643 2335666666 5668888765 5566666666 789999976
Q ss_pred c-ccCcCC-ChhHHHHhhhcCCeEEEEeccccccc
Q 023599 234 F-VMNMDA-DALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 234 ~-~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
. .|.+.- +..++..-.+.++.++++.|.-|+++
T Consensus 336 h~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~ 370 (714)
T PRK15400 336 YTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA 370 (714)
T ss_pred hhccCcccCCcChhhcCCCCCCceEEEEchhhccc
Confidence 5 343211 12223211112256799999999974
No 305
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.71 E-value=9.7e-07 Score=82.72 Aligned_cols=184 Identities=9% Similarity=0.084 Sum_probs=114.5
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCc-c--------ccCCCeEEeecccchhHHHHHHHHHH---h-hc-------------
Q 023599 82 YLPITGLPEFNKLSAKLIFGADSP-A--------IKENRVSTVQCLSGSGSLRIGADFLA---K-HY------------- 135 (280)
Q Consensus 82 y~~~~G~~~lr~~ia~~l~~~~~~-~--------~~~~~i~~v~t~g~~~al~~~~~~~~---~-~~------------- 135 (280)
+...+...++.+.+.+|+...-+. + -.++.-.-+.|+||+.|...+ +.. . +.
T Consensus 121 ~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~A--l~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 121 IETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITA--LWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred eecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHH--HHHHHHHhccccccccccccccc
Confidence 444445667777777775332110 0 011111112289999988876 322 1 11
Q ss_pred ---------CCCEEEEeCCCCCChHHHHHHcCC---eeeEEEeecCCCCCcCHHHHHHHHhc---CCCCcEEEEecCCCC
Q 023599 136 ---------YQHTVYLSQPTYGNHPNFFAAAGL---AMKTYHYYDPKTNGLDFQGMLQDLGA---APSGAIVLLQASGHN 200 (280)
Q Consensus 136 ---------~Gd~Vli~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~~~~~v~~~~p~N 200 (280)
++..|++++-.+......++.+|+ +++.+|. + +++.+|++.|++++.+ +..++++|+.+..++
T Consensus 199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~-d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt 276 (522)
T TIGR03799 199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT-D-ANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTT 276 (522)
T ss_pred hhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe-C-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence 134688887777777778888887 7889998 3 4578999999999863 223455666667788
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc--CCeEEEEecccccccccccccceEEEE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD--GGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.||.+-+ +++|+++|+++|+|+.+|.+|.....-.. . .+.+... ..+. +..|.-|.++ .-.-+|.+.+.
T Consensus 277 ~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~-~---~r~~l~gle~aDS-it~d~HK~l~-~P~g~G~llvr 347 (522)
T TIGR03799 277 ETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSN-T---YRHLLKGIERADS-VTIDAHKQLY-VPMGAGMVLFK 347 (522)
T ss_pred CCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCH-H---HHHHhcCchhCCE-EEEChhhcCC-cCcccEEEEEe
Confidence 9998876 56668889999999999999986543110 1 1122111 1233 3667788654 23556666554
No 306
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.70 E-value=2e-06 Score=79.10 Aligned_cols=217 Identities=12% Similarity=0.030 Sum_probs=116.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHH-HHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAV-RQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...||+..|.-...-| ...+.+ ++..+++. ......+ +.....+|-+.+++.+ . ...+.+.+ ++
T Consensus 51 dG~~yiD~~~g~~~~~lG--h~~p~v~~ai~~q~~--~~~~~~~-~~~~~~~la~~L~~~~----~--~~~~~v~f--~~ 117 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHG--HSHPKICDAIQQGAE--RGTSYGL-TSEQEILFAEELFSYL----G--LEDHKIRF--VS 117 (433)
T ss_pred CCCEEEEcccchhccccC--CCCHHHHHHHHHHHH--hCCCCCC-CCHHHHHHHHHHHHhC----C--CCcCEEEE--eC
Confidence 456788997774211112 233333 33333333 2211111 2222234444444442 1 11256777 99
Q ss_pred cchhHHHHHHHHHHhhcCC-CEEEEeCCCCCChHHH-HH--HcCCe----e-eEE--EeecCCC---CCcCHHHHHHHHh
Q 023599 119 SGSGSLRIGADFLAKHYYQ-HTVYLSQPTYGNHPNF-FA--AAGLA----M-KTY--HYYDPKT---NGLDFQGMLQDLG 184 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~G-d~Vli~~P~y~~~~~~-~~--~~G~~----~-~~v--~~~~~~~---~~~d~~~l~~~~~ 184 (280)
+|++|.+.+.++.... .| .+|+...-+|.+.... +. ..+.. . ..+ +...... ..-|.+.+++.+.
T Consensus 118 SGsEA~e~AiklAr~~-tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 196 (433)
T PRK00615 118 SGTEATMTAVRLARGI-TGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMN 196 (433)
T ss_pred chHHHHHHHHHHHHHh-hCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHH
Confidence 9999999995543322 34 5788888888775311 10 11100 0 000 0000000 0126888998886
Q ss_pred cCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccc
Q 023599 185 AAPSGAIVLLQASGHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSK 263 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 263 (280)
+...+..+|++.....-.|... +.+-+++|.++|++||+++|.||++..+... .... ....+....++ .|+|
T Consensus 197 ~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G---~~ga-~~~~gv~PDi~---~~gK 269 (433)
T PRK00615 197 SLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVA---QGGA-AAIYHVKPDIT---VYGK 269 (433)
T ss_pred hcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccccc---HhHH-HHhcCCCCCeE---EEcc
Confidence 5434444555554444446544 4677899999999999999999999766322 1111 11112233444 4899
Q ss_pred cccccccccceEEEE
Q 023599 264 TMGLYGERVGALSVV 278 (280)
Q Consensus 264 ~~~~~G~RvG~~v~~ 278 (280)
.+| .|+-+|++++.
T Consensus 270 ~lg-gG~p~~av~~~ 283 (433)
T PRK00615 270 ILG-GGLPAAAVVAH 283 (433)
T ss_pred ccc-CCcceeeeeec
Confidence 997 67878887764
No 307
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.70 E-value=5.6e-07 Score=75.24 Aligned_cols=166 Identities=13% Similarity=0.061 Sum_probs=121.3
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
-+..|.+.+++|+. . +.+-+ |+|+.++-+++ +.+++.+||.|++-.-.+....-.++.+|+++..||-
T Consensus 62 pI~~F~~dlaeFlg-~-------D~~R~--t~GARe~Kfav--Mhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~ 129 (382)
T COG1103 62 PIKDFLEDLAEFLG-M-------DEVRV--TAGAREAKFAV--MHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPN 129 (382)
T ss_pred cHHHHHHHHHHHhC-C-------ceeee--cccchhhHHHH--HHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCC
Confidence 35678888999962 2 55666 99999999999 8999999999999887665555667789999999996
Q ss_pred ecCCCCCcCHHHHHHHHhc---C-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 167 YDPKTNGLDFQGMLQDLGA---A-PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 167 ~~~~~~~~d~~~l~~~~~~---~-~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
....++.++++...+.+.+ . .+.+++.+++++. |..=+..+-++++++|+++++.++...+|.--..+-
T Consensus 130 tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~D---g~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpv---- 202 (382)
T COG1103 130 TGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVD---GEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPV---- 202 (382)
T ss_pred CCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccC---CCcCCchhhHHHHHHHHHcCCceEeecceeeccccc----
Confidence 5455688999888887754 2 2345667775554 555567788999999999999999999996544321
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
+..+.+.. ..++|=-|+++ +.--+|.+..
T Consensus 203 ----s~ke~g~D-FiVgSGHKsmA-As~PiGvl~~ 231 (382)
T COG1103 203 ----SGKEIGAD-FIVGSGHKSMA-ASAPIGVLAM 231 (382)
T ss_pred ----cccccCCC-EEEecCccchh-ccCCeeEEee
Confidence 11112223 34788888886 5556676543
No 308
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.69 E-value=2.7e-08 Score=85.93 Aligned_cols=159 Identities=16% Similarity=0.098 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcC----C--CEEEEeCCCCCChHHHHHHcCCee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYY----Q--HTVYLSQPTYGNHPNFFAAAGLAM 161 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~----G--d~Vli~~P~y~~~~~~~~~~G~~~ 161 (280)
.++|.+.|.+....-+........|++ .+|+++.++++ +.++... + -.|+...|.|+.|......+.-..
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~--GtGsTQL~~Aa--lyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~ 120 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVF--GTGSTQLFNAA--LYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRL 120 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEE--ECHHHHHHHHH--HHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTT
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEE--cCCHHHHHHHH--HHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccC
Confidence 467888888875333333222233444 99999999999 5554322 2 379999999999987765433233
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
..+.- |...|. ........+=++++||||.|.. .+. +++..+..+|.|-+|..=+|.+
T Consensus 121 y~w~G-da~~~~----------~~~~~~~~IElVTSPNNPDG~l-----r~~---V~~g~~~k~I~D~AYYWPhyTp--- 178 (363)
T PF04864_consen 121 YKWAG-DASNFK----------NSDNPSPYIELVTSPNNPDGQL-----REA---VLNGSSGKVIHDLAYYWPHYTP--- 178 (363)
T ss_dssp EEEEE-ECCCGT----------T-S-CCGEEEEEESS-TTT--------------SSTTTEEEEEEE-TT-STTTS----
T ss_pred ccccc-cHHhhc----------cCCCCCCeEEEEeCCCCCcccc-----cch---hcCCCCcceeeeeeeecccccc---
Confidence 33333 222221 1112334577889999999964 122 2345567789999998877642
Q ss_pred hhHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+....+ .=|-+.|+||.-|=+|-|+||+++-
T Consensus 179 ---I~~~aD---~DiMLFT~SK~TGHAGSR~GWAlVK 209 (363)
T PF04864_consen 179 ---ITAPAD---HDIMLFTLSKLTGHAGSRFGWALVK 209 (363)
T ss_dssp -----S-B-----SEEEEEHHHHCS-GGG-EEEEEES
T ss_pred ---cCCCCC---CceEEEEEecccCccccccceeeec
Confidence 222222 2355899999999999999999874
No 309
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.68 E-value=2.9e-07 Score=91.54 Aligned_cols=155 Identities=15% Similarity=0.168 Sum_probs=100.0
Q ss_pred CCeEEeecccchhHHHHHHH-HHHh-hcCCC----EEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHH
Q 023599 110 NRVSTVQCLSGSGSLRIGAD-FLAK-HYYQH----TVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDL 183 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~-~~~~-~~~Gd----~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~ 183 (280)
+++.+ +.+||+++...... +... ..+|+ +|++++-.++.....+...|++++.++. + .++.+|++.|++++
T Consensus 558 d~~sl-~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~-d-~~G~iD~~~L~~~i 634 (954)
T PRK05367 558 DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVAC-D-ENGNIDLDDLRAKA 634 (954)
T ss_pred CCEEE-CccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECC-C-CCCCcCHHHHHHHH
Confidence 45555 25555555533310 2221 24565 6999999898777888899999999998 3 34689999999999
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccc
Q 023599 184 GAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSK 263 (280)
Q Consensus 184 ~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 263 (280)
.++..+.++|++++|++- |. -.+++++|+++|+++|+++++|.++..-..... ...+.+.. ++..|.-|
T Consensus 635 ~~~~~~la~V~it~pst~-G~--~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~-------~pg~~GAD-i~~~s~HK 703 (954)
T PRK05367 635 EEHADNLAAIMITYPSTH-GV--FEETIREICEIVHEHGGQVYLDGANMNAQVGLA-------RPGDIGAD-VSHLNLHK 703 (954)
T ss_pred hccCCCeEEEEEEcCCCC-ee--ecCCHHHHHHHHHHcCCEEEEECcChhhccCCC-------ChhhcCCC-EEEecCcc
Confidence 875344567777666654 22 224588899999999999999999853322110 01123334 44677889
Q ss_pred ccccc----ccccceEEEE
Q 023599 264 TMGLY----GERVGALSVV 278 (280)
Q Consensus 264 ~~~~~----G~RvG~~v~~ 278 (280)
+|+.| |=-+|.+.+.
T Consensus 704 ~f~~P~G~GGPg~G~l~vr 722 (954)
T PRK05367 704 TFCIPHGGGGPGVGPIGVK 722 (954)
T ss_pred cCCCCcCCCCCceEEEeec
Confidence 87532 3335565553
No 310
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.68 E-value=6e-07 Score=86.11 Aligned_cols=147 Identities=18% Similarity=0.106 Sum_probs=98.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH-HHHcCCeeeEEEeec-CCC--CCcCHH-----HHHHHHhcCC
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF-FAAAGLAMKTYHYYD-PKT--NGLDFQ-----GMLQDLGAAP 187 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~-~~~~G~~~~~v~~~~-~~~--~~~d~~-----~l~~~~~~~~ 187 (280)
++|+|.++.++ +.+.+.+||+|++..-++-...+. +...|++++++.-.- +.+ .+++.+ .+++++.+++
T Consensus 196 vNGTS~gn~a~--i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~ 273 (720)
T PRK13578 196 LNGTSASNKVV--TNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVA 273 (720)
T ss_pred eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcC
Confidence 99999999999 889999999999999988766663 778999999985421 111 334544 4888887662
Q ss_pred -C-----C-cEEEEecCCCCCCCCCCCHHHHHHHHHH-HHhCCceeEEcccCCCc-ccCcC-CChhHH-HHhhhcCCeEE
Q 023599 188 -S-----G-AIVLLQASGHNPTGIDPTAQQWEQIRQL-MRLKRLLPFFDCAYQGF-VMNMD-ADALPV-RMFVADGGECL 256 (280)
Q Consensus 188 -~-----~-~~~v~~~~p~NPTG~~~~~~~l~~i~~~-~~~~~~~ii~De~y~~~-~~~~~-~~~~~~-~~~~~~~~~~i 256 (280)
. + .+++++++| +--|.+++. ++|++. +++++ .|++||+|... .|.+. ++.++. ..+-..+.-++
T Consensus 274 p~~~~~~~p~k~vvit~p-TYdG~~ydi---~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~ 348 (720)
T PRK13578 274 PERADEARPFRLAVIQLG-TYDGTIYNA---RQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIF 348 (720)
T ss_pred ccccccccCceEEEEECC-CCcceeecH---HHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeE
Confidence 2 1 357777655 355888765 555666 56677 99999999655 34321 111111 11111123589
Q ss_pred EEeccccccccccccc
Q 023599 257 VAQSYSKTMGLYGERV 272 (280)
Q Consensus 257 ~~~S~SK~~~~~G~Rv 272 (280)
++.|.-|+++ |+--
T Consensus 349 v~QStHKtL~--alTQ 362 (720)
T PRK13578 349 VTQSVHKQQA--GFSQ 362 (720)
T ss_pred EEEChhhcch--hhhh
Confidence 9999999973 5443
No 311
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.68 E-value=4.5e-07 Score=89.11 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=92.4
Q ss_pred CEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHH
Q 023599 138 HTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQL 217 (280)
Q Consensus 138 d~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~ 217 (280)
++|+++.-.++.....++..|++++.++. + +++.+|+++|++++.++..+.++|++++|+| +|.+-+ ++++|+++
T Consensus 579 ~~vlip~saHgtnPasa~~~G~~Vv~V~~-d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~i 653 (939)
T TIGR00461 579 NICLIPVSAHGTNPASAAMAGMQVVPVNC-D-QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDI 653 (939)
T ss_pred CEEEEEccccCcCHHHHHHCCCEEEEecc-C-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHH
Confidence 57999998887777778899999999998 3 4568999999999986434556888999999 786543 38889999
Q ss_pred HHhCCceeEEcccCCC-cccCcCCChhHHHHhhhcCCeEEEEeccccccc----ccccccceEEEE
Q 023599 218 MRLKRLLPFFDCAYQG-FVMNMDADALPVRMFVADGGECLVAQSYSKTMG----LYGERVGALSVV 278 (280)
Q Consensus 218 ~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~RvG~~v~~ 278 (280)
|+++|.++++|-++.- +..- ....+.+.+ ++.+|.-|+|+ ..|=-+|.+.+.
T Consensus 654 ah~~G~~v~VDgAq~~al~~l--------~~Pg~~GaD-i~~~s~HKtf~~P~G~GGPg~G~i~vr 710 (939)
T TIGR00461 654 VHSFGGQVYLDGANMNAQVGL--------TSPGDLGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVK 710 (939)
T ss_pred HHHcCCEEEEEecChhhCCCC--------CCccccCCC-EEEecCCccCCCCCCCCCCCeEEEEEh
Confidence 9999999999999843 2221 001122233 44677888765 234456777664
No 312
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.66 E-value=7.9e-07 Score=85.22 Aligned_cols=149 Identities=11% Similarity=0.024 Sum_probs=101.8
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee-cCCC--CCcCH-----HHHHHHHhcCCC
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY-DPKT--NGLDF-----QGMLQDLGAAPS 188 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~-~~~~--~~~d~-----~~l~~~~~~~~~ 188 (280)
++|++.++.++ +.+.+.+||+|++..-++-...+.+...|++++++.-. ++.+ .+++. +.+++++.+++.
T Consensus 217 vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~ 294 (713)
T PRK15399 217 TNGTSTSNKIV--GMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQ 294 (713)
T ss_pred eCChHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCC
Confidence 99999999999 88899999999999999877777888899999998531 1111 33455 899999987643
Q ss_pred --CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCcee-EEcccCCCc-ccCcC-CChhHHHHhhhcCCeEEEEecccc
Q 023599 189 --GAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLP-FFDCAYQGF-VMNMD-ADALPVRMFVADGGECLVAQSYSK 263 (280)
Q Consensus 189 --~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~i-i~De~y~~~-~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK 263 (280)
++..+++++| +--|.+++.+++.+ .| ++.+ ++||+|... .|.+. .+..++........-++++.|.-|
T Consensus 295 ~~~p~~vvit~p-TYdGi~yd~~~I~~---~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHK 367 (713)
T PRK15399 295 AQWPVHAVITNS-TYDGLLYNTDWIKQ---TL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHK 367 (713)
T ss_pred cCCceEEEEECC-CCCceeeCHHHHHH---Hh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhc
Confidence 2356777666 56788887766544 44 4545 699999764 33321 112222211012345778999999
Q ss_pred cccccccccceEE
Q 023599 264 TMGLYGERVGALS 276 (280)
Q Consensus 264 ~~~~~G~RvG~~v 276 (280)
++ +|+.-+-++
T Consensus 368 tL--~alTQaS~i 378 (713)
T PRK15399 368 ML--AAFSQASLI 378 (713)
T ss_pred cc--cccchheee
Confidence 97 566655443
No 313
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.66 E-value=3.1e-07 Score=82.78 Aligned_cols=202 Identities=13% Similarity=0.100 Sum_probs=121.0
Q ss_pred cchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCcccc-----CCCeEEeecccchhHHHHHHHHHHh-
Q 023599 60 LLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIK-----ENRVSTVQCLSGSGSLRIGADFLAK- 133 (280)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~-----~~~i~~v~t~g~~~al~~~~~~~~~- 133 (280)
.+...+........+ .....|...+...++.+.+.+|+...-+.+-. ...=++ |+||++++..+ +.+.
T Consensus 51 ~~~~i~~~~l~~~~n--~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~--t~Ggt~anl~a--l~aAR 124 (373)
T PF00282_consen 51 SPASILADLLASALN--QNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVF--TSGGTEANLYA--LLAAR 124 (373)
T ss_dssp CHHHHHHHHHHHHHT---BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEE--ESSHHHHHHHH--HHHHH
T ss_pred cHHHHHHHHHHhhhc--ccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeE--eccchHHHHHH--HHHHH
Confidence 444555555555442 21333433445667788888886544333211 011223 99999999877 3321
Q ss_pred ---h----cCC-----C-EEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC---CCCcEEEEecC
Q 023599 134 ---H----YYQ-----H-TVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA---PSGAIVLLQAS 197 (280)
Q Consensus 134 ---~----~~G-----d-~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~v~~~~ 197 (280)
. ..| + .|++++-.+......+..+|+.++.||+ ++ ++.+|++.|++++.+. ...+.+|+.+-
T Consensus 125 ~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~-~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~ 202 (373)
T PF00282_consen 125 ERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPT-DE-DGRMDIEALEKALEKDIANGKTPFAVVATA 202 (373)
T ss_dssp HHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-B-BT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEB
T ss_pred HHHhhhhhhcccccccccccccccccccHHHHhcceeeeEEEEecC-Cc-chhhhHHHhhhhhcccccccccceeeeccC
Confidence 1 112 2 5666666777788899999999999999 44 6789999999998653 22355677777
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc--CcCCChhHHHHhhhcCCeEEEEecccccccccccccceE
Q 023599 198 GHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM--NMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGAL 275 (280)
Q Consensus 198 p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~ 275 (280)
.+..||.+ +++++|.++|+++++|+-+|.+|+...+ +..+. -...+. ....| .-++-|.++ .-.-+|++
T Consensus 203 Gtt~~Ga~---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~--~~~gi~--~adSi-t~d~HK~l~-~P~~~~~~ 273 (373)
T PF00282_consen 203 GTTNTGAI---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRH--LLFGIE--RADSI-TIDPHKWLG-VPYGCGVL 273 (373)
T ss_dssp S-TTTSBB----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGG--GGTTGG--GESEE-EEETTTTTS--SSS-EEE
T ss_pred CCcccccc---cCHHHHhhhccccceeeeecccccccccccccccc--cccccc--ccccc-ccchhhhhc-CCccceeE
Confidence 88888865 6788899999999999999999998332 21111 011111 11333 457788887 55677776
Q ss_pred EEE
Q 023599 276 SVV 278 (280)
Q Consensus 276 v~~ 278 (280)
.+.
T Consensus 274 l~r 276 (373)
T PF00282_consen 274 LVR 276 (373)
T ss_dssp EES
T ss_pred Eee
Confidence 653
No 314
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.65 E-value=5.7e-06 Score=76.61 Aligned_cols=223 Identities=12% Similarity=0.098 Sum_probs=118.2
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+|+..|.....-|+. .+..+++..+++.+-......+.......+|.+.+++..- ...+.+.+ +++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p------~~~~~v~f--~~S 121 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYS-HPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISP------IENPKVLF--GLS 121 (457)
T ss_pred CCCEEEECCcCHHhhccCCC-CHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCC------CCcCEEEE--eCc
Confidence 35678898777421112321 2233344444443100111122222222345555554421 11256777 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH-cCC-------------eeeEEEeecCCC--CC----cCH---
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA-AGL-------------AMKTYHYYDPKT--NG----LDF--- 176 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~-~G~-------------~~~~v~~~~~~~--~~----~d~--- 176 (280)
|++|.+.+..+........+|+...-+|.+....... .|. .+..+|..+... +. .+.
T Consensus 122 GsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 201 (457)
T PRK05639 122 GSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDEL 201 (457)
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHH
Confidence 9999999955543333346788888888775432221 111 123333311100 00 022
Q ss_pred -----HHHHHHHhc---CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH
Q 023599 177 -----QGMLQDLGA---APSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM 247 (280)
Q Consensus 177 -----~~l~~~~~~---~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 247 (280)
+.+++.+.. .+.+...|++..-+--.|.. .+.+-+++|.++|++||+++|.||+...|.... ..+. ..
T Consensus 202 ~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG--~~~a-~~ 278 (457)
T PRK05639 202 INRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTG--KWFA-SE 278 (457)
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCc--hHHH-HH
Confidence 234444322 13345566665555555664 468889999999999999999999998763321 1111 11
Q ss_pred hhhcCCeEEEEecccccccccccccceEEEE
Q 023599 248 FVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 248 ~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+...++++ |+|.++ .|+-+|.+++.
T Consensus 279 ~~gv~PDiv~---~gK~l~-gG~pi~av~~~ 305 (457)
T PRK05639 279 WFEVKPDLII---FGKGVA-SGMGLSGVIGR 305 (457)
T ss_pred hcCCCCCEEE---echhhc-CCCcceeEEeh
Confidence 1233346665 799997 68888888764
No 315
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.63 E-value=7.4e-07 Score=87.28 Aligned_cols=168 Identities=14% Similarity=0.129 Sum_probs=104.4
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhh----c---CC-CEEEEeCCCC
Q 023599 79 DKEYLP---ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKH----Y---YQ-HTVYLSQPTY 147 (280)
Q Consensus 79 ~~~y~~---~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~----~---~G-d~Vli~~P~y 147 (280)
.+.|.| .+|..++...+.+++....+ .+.+.+ +-.+|..+-.+. ++++- . ++ ++|+++.-.+
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtG----md~~Sl-~p~sGA~gE~A~--Lmair~yh~~~Ge~~r~~vLIp~saH 601 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCAITG----FDAICM-QPNSGAQGEYAG--LLAIRRYHRSRGQSQRDICLIPSSAH 601 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHHHHC----CCeEee-cCCchHHHHHHH--HHHHHHHHHhcCCCCCCEEEeccccc
Confidence 366887 67765544444444222211 133332 344555555444 33321 1 22 5788888777
Q ss_pred CChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 148 GNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 148 ~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
......+...|++++.++. + +++.+|+++|++++.+...+.++|++++|++=. ++ .+++++|+++|+++|+++++
T Consensus 602 gtNpasa~~~GieVv~Vp~-D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~G--v~-e~~V~eI~~iah~~Galv~v 676 (954)
T PRK12566 602 GTNPASAQMAGMRVVIVEC-D-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHG--VY-EEGIREICEVVHQHGGQVYM 676 (954)
T ss_pred ccCHHHHHHCCCEEEEecc-C-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCc--ee-cchHHHHHHHHHHcCCEEEE
Confidence 5555667788999999998 4 356899999999997544455677776666544 33 56799999999999999999
Q ss_pred cccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 228 DCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 228 De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
|-+..--.... ....+.+.. ++.+++-|+|+
T Consensus 677 DgA~~~a~~~l-------~~Pg~~GAD-i~~~s~HKtf~ 707 (954)
T PRK12566 677 DGANLNAQVGL-------ARPADIGAD-VSHMNLHKTFC 707 (954)
T ss_pred EeeChhhccCC-------CChhhcCCC-EEEecCCcccC
Confidence 99874211111 111123333 45788889885
No 316
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.63 E-value=9.8e-07 Score=78.92 Aligned_cols=138 Identities=13% Similarity=-0.007 Sum_probs=93.5
Q ss_pred CCeEEeeccc-chhHHHHHHHHHHhhcCCCEEEEeCCCCCC--hHHHHHHcCCeeeEEEeec--CCCCCcCHHHHHHHHh
Q 023599 110 NRVSTVQCLS-GSGSLRIGADFLAKHYYQHTVYLSQPTYGN--HPNFFAAAGLAMKTYHYYD--PKTNGLDFQGMLQDLG 184 (280)
Q Consensus 110 ~~i~~v~t~g-~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~--~~~~~~~~G~~~~~v~~~~--~~~~~~d~~~l~~~~~ 184 (280)
+++++ +.| ||+|++++ +.+++.+||++++..-+... +..+++.+|+ +..+...+ +++..++++.++. .
T Consensus 56 ~~v~~--~~gsgT~a~ea~--~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~ 128 (349)
T TIGR01364 56 YEVLF--LQGGATGQFAAV--PLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S 128 (349)
T ss_pred ceEEE--EcCCchHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C
Confidence 45666 655 99999999 88888899998888766533 4666778898 66666411 1223456665442 2
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 185 AAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
+ +..+|.+++..|.||+..+ ++++.+++++++|.+-.-...+.+ +.+. + +++.|.-|.
T Consensus 129 ~---~~~~v~~th~ETstGv~~~--------~l~~~~~~l~iVDavss~g~~~id--------~~~~-d--~~~~ssqK~ 186 (349)
T TIGR01364 129 E---DAAYVHYCANETIHGVEFR--------ELPDVKNAPLVADMSSNILSRPID--------VSKF-G--LIYAGAQKN 186 (349)
T ss_pred C---CCCEEEEcCCCCcccEecc--------eecccCCCeEEEEccccccCccCC--------HHHc-c--EEEEecccc
Confidence 2 2347888888899998664 556678999999998765544321 1122 2 788889999
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
+|.|| +|.+++.
T Consensus 187 lgP~G--lg~l~~s 198 (349)
T TIGR01364 187 IGPAG--LTVVIVR 198 (349)
T ss_pred cCCCc--eEEEEEC
Confidence 99776 5555543
No 317
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.61 E-value=9.1e-06 Score=74.02 Aligned_cols=224 Identities=15% Similarity=0.107 Sum_probs=127.9
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.++..|||..|.--..-|+ -.+..++++.+++..-......|......-+|-+.+.+.+-+. ....+.+ +++
T Consensus 54 dG~~ylDf~sgi~v~~~GH-~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-----~~~~~~f--~~s 125 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGH-NHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-----GLKKVFF--GNS 125 (447)
T ss_pred CCCEEEEcccCcchhccCC-CCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcc-----cCCeEEe--cCC
Confidence 4567899988631011121 2334445555555521112233333223344555555543221 1255666 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH-HHHc--------C-----CeeeEEEeecCCC--CCc--------C
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF-FAAA--------G-----LAMKTYHYYDPKT--NGL--------D 175 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~-~~~~--------G-----~~~~~v~~~~~~~--~~~--------d 175 (280)
|++|.+++..+.........|+...-+|.+.... +... | ..+..+|..+.-. +.. .
T Consensus 126 GaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 126 GAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHH
Confidence 9999999965554444456788888888654322 2211 1 1255555522111 111 2
Q ss_pred HHHHHHHHhc---CCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc
Q 023599 176 FQGMLQDLGA---APSGAIVLLQASGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD 251 (280)
Q Consensus 176 ~~~l~~~~~~---~~~~~~~v~~~~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 251 (280)
.+.++..+.. .+.+.+.+++..-+.-.|.+.+ .+-++++.++|++||+++|.||+...+.--. ..+.+... +-
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG--~~fa~E~~-gv 282 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG--KMFAFEHF-GV 282 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc--cchhhhhc-CC
Confidence 3445554432 2455677887777777777655 4556999999999999999999998887642 22222222 22
Q ss_pred CCeEEEEecccccccccccccceEEEE
Q 023599 252 GGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 252 ~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.+.+| ++||.+| .|+-+|-++..
T Consensus 283 ~PDiv---t~aK~ig-~G~Pl~avv~r 305 (447)
T COG0160 283 EPDIV---TLAKSLG-GGLPLSAVVGR 305 (447)
T ss_pred CCCEE---Eeccccc-CCCceeEEecc
Confidence 23555 6799998 59999987754
No 318
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=98.61 E-value=9.9e-07 Score=75.13 Aligned_cols=108 Identities=10% Similarity=0.073 Sum_probs=86.4
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCC--ChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEE
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYG--NHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLL 194 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~--~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~ 194 (280)
...|+.+++++ +.+++.|||.|++..-+-. .+.+..+.+|+++..++. +.+....++.+++++..++. .+++
T Consensus 74 sgsGh~g~E~a--l~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~--~~G~~~~le~i~~~lsqh~p--~~vf 147 (385)
T KOG2862|consen 74 SGSGHSGWEAA--LVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEA--DIGQAVPLEEITEKLSQHKP--KAVF 147 (385)
T ss_pred ecCCcchHHHH--HHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEec--CcccCccHHHHHHHHHhcCC--ceEE
Confidence 77789999999 8999999999988865442 356777899999999976 55678899999999988743 3777
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCC
Q 023599 195 QASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQ 232 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~ 232 (280)
+++-..-||+.-+ -+..+-++|++|+.++++|.+-+
T Consensus 148 v~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~VaS 183 (385)
T KOG2862|consen 148 VTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVAS 183 (385)
T ss_pred EEecCccccccch--HHHHHHHHhhcCCeEEEEechhh
Confidence 7767778887654 24556778999999999999864
No 319
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.61 E-value=2.9e-06 Score=76.77 Aligned_cols=209 Identities=11% Similarity=0.126 Sum_probs=128.8
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
-.|||=... +...+.+...+++.. + ...|...+....|.+.+++.+ +. +.++. |+.|.+
T Consensus 42 V~IDLrSDT-----gT~apS~~m~aAM~~-----G-DD~Y~gdpSv~~Lee~vael~-G~-------E~alp--thqGRg 100 (467)
T TIGR02617 42 VFIDLLTDS-----GTGAVTQSMQAAMMR-----G-DEAYSGSRSYYALAESVKNIF-GY-------QYTIP--THQGRG 100 (467)
T ss_pred eEEECccCC-----CCCCCCHHHHHHHHc-----C-CcccccCchHHHHHHHHHHHh-CC-------ceEEE--CCCCch
Confidence 457886544 222355555555443 2 245888888899999999985 33 44555 888899
Q ss_pred HHHHHHHHHHhhc-CCCEEEEeCC--------CCCChHHHHHHcCCeeeEEEee--------cCCCCCcCHHHHHHHHhc
Q 023599 123 SLRIGADFLAKHY-YQHTVYLSQP--------TYGNHPNFFAAAGLAMKTYHYY--------DPKTNGLDFQGMLQDLGA 185 (280)
Q Consensus 123 al~~~~~~~~~~~-~Gd~Vli~~P--------~y~~~~~~~~~~G~~~~~v~~~--------~~~~~~~d~~~l~~~~~~ 185 (280)
+-.++ +..+++ +||++.+..+ .|..........|+.++.++.. .+..+.+|++++++++.+
T Consensus 101 aE~Il--~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~ 178 (467)
T TIGR02617 101 AEQIY--IPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEE 178 (467)
T ss_pred HHHHH--HHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhh
Confidence 98888 666677 7887775443 2232345566788887776431 122467899999999986
Q ss_pred CC-CCc--EEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC----ccc--CcCCChhHHHHhhh---cCC
Q 023599 186 AP-SGA--IVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG----FVM--NMDADALPVRMFVA---DGG 253 (280)
Q Consensus 186 ~~-~~~--~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~----~~~--~~~~~~~~~~~~~~---~~~ 253 (280)
.. .+. ...-++ .|-=-|+.+|.+.++++.++|++||+.++.|-+-.. |+- +......++..+.. ...
T Consensus 179 ~g~~~i~~v~~tlt-~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~a 257 (467)
T TIGR02617 179 VGPNNVPYIVATIT-CNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYA 257 (467)
T ss_pred cCCCCceeeeeeEE-EecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccC
Confidence 31 111 111111 122358899999999999999999999999975311 110 00001122233321 112
Q ss_pred eEEEEecccccccccccccceEEEEc
Q 023599 254 ECLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 254 ~~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
.. +..|+||.+++ .+|-+++..
T Consensus 258 Ds-vt~slsKglgA---pvGg~Lag~ 279 (467)
T TIGR02617 258 DM-LAMSAKKDAMV---PMGGLLCFK 279 (467)
T ss_pred CE-EEEEcCCCCCC---cccceEEec
Confidence 33 47799998865 488777654
No 320
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.59 E-value=5.2e-06 Score=76.91 Aligned_cols=160 Identities=13% Similarity=0.071 Sum_probs=93.8
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhc--CC-CEEEEeCCCCCChHHHHH-HcCCeee---EEEeecCCC--CCcCHHHHH
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHY--YQ-HTVYLSQPTYGNHPNFFA-AAGLAMK---TYHYYDPKT--NGLDFQGML 180 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~--~G-d~Vli~~P~y~~~~~~~~-~~G~~~~---~v~~~~~~~--~~~d~~~l~ 180 (280)
+.+.+ +++|++|.+.+.++..... .| .+|+...-+|.+...... ..|-... +.|....-. ...|.+.++
T Consensus 142 ~~v~f--~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 219 (459)
T PRK11522 142 KYSFF--CNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMR 219 (459)
T ss_pred CEEEE--eCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHH
Confidence 56777 9999999999955443332 23 368888888877643332 2221110 111100000 012677888
Q ss_pred HHHhc---CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEE
Q 023599 181 QDLGA---APSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECL 256 (280)
Q Consensus 181 ~~~~~---~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i 256 (280)
+.+.. ...+..++++..-..-.|.. .+.+-++++.++|++||+++|.||+...|.-.. ..+... ..+..+.++
T Consensus 220 ~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG--~~~a~e-~~gv~PDiv 296 (459)
T PRK11522 220 TALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG--KMFACE-HENVQPDIL 296 (459)
T ss_pred HHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc--hhhhhh-ccCCCCCEE
Confidence 87753 22334456655544445664 466778999999999999999999997653211 111111 112223444
Q ss_pred EEecccccccccc-cccceEEEE
Q 023599 257 VAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 257 ~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
+++|.+| .| +-+|.+++.
T Consensus 297 ---t~gK~lg-gG~~Pigav~~~ 315 (459)
T PRK11522 297 ---CLAKALG-GGVMPIGATIAT 315 (459)
T ss_pred ---Eechhhh-CCCccceeEEEc
Confidence 7899998 67 578877764
No 321
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.58 E-value=1.3e-05 Score=74.44 Aligned_cols=159 Identities=12% Similarity=0.087 Sum_probs=93.8
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHH-HHHHcCC------------eeeEEEeecCCC--CC-
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPN-FFAAAGL------------AMKTYHYYDPKT--NG- 173 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~-~~~~~G~------------~~~~v~~~~~~~--~~- 173 (280)
+.+.+ +++|++|.+++..+........+|+...-+|.+... .+...|. .+..+|..+... +.
T Consensus 131 ~~v~f--~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (459)
T PRK06082 131 NRVLF--APGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPD 208 (459)
T ss_pred CEEEE--CCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCC
Confidence 56777 999999999995444333233688888888866532 2222221 112222100000 00
Q ss_pred c------CHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH
Q 023599 174 L------DFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM 247 (280)
Q Consensus 174 ~------d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 247 (280)
. .++.+++.+.+. .+..+|++....+--+...+.+-+++|.++|++||+++|.||+...|.-.. ..+. ..
T Consensus 209 ~~~~~~~~~~~l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG--~~fa-~e 284 (459)
T PRK06082 209 ADGSDVHYADYLEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG--EWFT-HQ 284 (459)
T ss_pred hhHHHHHHHHHHHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--hhhH-hH
Confidence 0 135577777543 234455655444444456778889999999999999999999998763321 1111 12
Q ss_pred hhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 248 FVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 248 ~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
..+..+++++ ++|.++ .| +-+|.+++.
T Consensus 285 ~~gv~PDiv~---~gKgl~-gG~~P~~av~~~ 312 (459)
T PRK06082 285 AYGIEPDILC---IGKGLG-GGLVPIAAMITK 312 (459)
T ss_pred hhCCCCCEEE---eccccc-CCCCcceEEEEc
Confidence 2233345554 899998 56 478877654
No 322
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.54 E-value=1.2e-06 Score=78.65 Aligned_cols=155 Identities=9% Similarity=-0.081 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC--hHHHHHHcCCeeeEEEe
Q 023599 89 PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN--HPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 89 ~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~--~~~~~~~~G~~~~~v~~ 166 (280)
.+.++.+++++... ...++++ .+.+|+.+++++ +.+++.+||++++..-+..+ +...++.+|.. ..+..
T Consensus 51 ~~~~~~l~~l~~~~-----~~~~v~~-~~gsgt~~~Ea~--~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~ 121 (360)
T PRK05355 51 EEAEADLRELLNIP-----DNYKVLF-LQGGASLQFAMV--PMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAAS 121 (360)
T ss_pred HHHHHHHHHHhCCC-----CCcEEEE-EcCCchHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEec
Confidence 45666666665321 1134544 378889999999 89999999998888766543 35567778864 55554
Q ss_pred ecCCCCCcCHHHHHH-HHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHH
Q 023599 167 YDPKTNGLDFQGMLQ-DLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPV 245 (280)
Q Consensus 167 ~~~~~~~~d~~~l~~-~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 245 (280)
+......+..++++ .+.++++ +|.+++..|.||...+ ++++| +++++|+|.+-.-...+.
T Consensus 122 -~~~~g~~~~~~~~~~~l~~~~~---~V~~th~eTstGv~~~--~i~~i------~g~l~vVDavss~g~~~i------- 182 (360)
T PRK05355 122 -SEDDGFTYIPPLDEWQLSDDAA---YVHYTSNETIDGTEFH--ELPDT------GDVPLVADMSSDILSRPI------- 182 (360)
T ss_pred -ccccCCCCCCChhhccCCCCCC---EEEEccCCCcceEecC--ccccc------CCCcEEEEcCccccCccC-------
Confidence 22122334444444 5554433 7888888899999874 34444 899999999876554431
Q ss_pred HHhhhcCCeEEEEecccccccccccccceEEE
Q 023599 246 RMFVADGGECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 246 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
.+.+. . +++.|--|.+|.|| +|.+++
T Consensus 183 -dv~~~--d-~~~~ssqK~lgP~G--lg~l~~ 208 (360)
T PRK05355 183 -DVSKF--G-LIYAGAQKNIGPAG--LTIVIV 208 (360)
T ss_pred -CHHHc--c-EEEEeccccccCCc--eEEEEE
Confidence 11122 2 77888889998665 444444
No 323
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.50 E-value=7.4e-06 Score=75.25 Aligned_cols=221 Identities=9% Similarity=-0.034 Sum_probs=114.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCC-CHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITG-LPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G-~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...+|+..|.....-|+. .+..++++.+++. .. .|....+ ..+.+..+++.+...-. ...+.+.+ ++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~--~~---~~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f--~~ 110 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYN-HPQLNAAMKSQID--AM---SHVMFGGITHPPAIELCRKLVAMTP--QPLECVFL--AD 110 (428)
T ss_pred CCCEEEEcchhHHhhcCCCC-CHHHHHHHHHHHh--hc---CCccccccCCHHHHHHHHHHHhhCC--CCcCEEEE--eC
Confidence 45678899877421222322 2333344444443 11 1111100 12334445555433211 11256777 99
Q ss_pred cchhHHHHHHHHHHhh----cC-CCEEEEeCCCCCChHHHHHHc-CC-------------eeeEEEeecCC---CC-CcC
Q 023599 119 SGSGSLRIGADFLAKH----YY-QHTVYLSQPTYGNHPNFFAAA-GL-------------AMKTYHYYDPK---TN-GLD 175 (280)
Q Consensus 119 g~~~al~~~~~~~~~~----~~-Gd~Vli~~P~y~~~~~~~~~~-G~-------------~~~~v~~~~~~---~~-~~d 175 (280)
+|++|.+.+.++.... .. ..+|+...-+|.+........ +. .+..++..+.. .+ .-|
T Consensus 111 SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d 190 (428)
T PRK07986 111 SGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERD 190 (428)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHH
Confidence 9999999985544332 12 367888888887643222111 11 11222220000 00 125
Q ss_pred HHHHHHHHhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCC
Q 023599 176 FQGMLQDLGAAPSGAIVLLQAS-GHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGG 253 (280)
Q Consensus 176 ~~~l~~~~~~~~~~~~~v~~~~-p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 253 (280)
++.+++.+.....+..+|++.. .+.-.|. ..+++-+++|.++|++||+++|.||++..+.... . ... ....+..+
T Consensus 191 ~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG-~-~fa-~~~~gv~P 267 (428)
T PRK07986 191 IAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG-K-LFA-CEHAGIAP 267 (428)
T ss_pred HHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC-C-eee-ecccCCCC
Confidence 6788888865433444555543 2444454 3467889999999999999999999996663221 1 100 11112223
Q ss_pred eEEEEecccccccccc-cccceEEE
Q 023599 254 ECLVAQSYSKTMGLYG-ERVGALSV 277 (280)
Q Consensus 254 ~~i~~~S~SK~~~~~G-~RvG~~v~ 277 (280)
.++ .++|.++ .| +-+|.+++
T Consensus 268 Di~---t~gK~l~-gG~~p~~av~~ 288 (428)
T PRK07986 268 DIL---CLGKALT-GGTMTLSATLT 288 (428)
T ss_pred CEE---Eechhhh-CCcccCcchhc
Confidence 455 4899997 56 35665443
No 324
>PRK06062 hypothetical protein; Provisional
Probab=98.49 E-value=2.5e-05 Score=72.28 Aligned_cols=222 Identities=13% Similarity=0.078 Sum_probs=116.6
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...||+..|.-...-|+- .+..+++..+++. .. .+ +.... ..+.+..+++.+...-.. ..+.+.+ +++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~--~~-~~-~~~~~-~~~~~~~lae~L~~~~p~--~~~~v~f--~~S 120 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQ-HPKVVAAIQEQAA--RL-CT-VAPAH-ANDARSEAARLIAERAPG--DLSKVFF--TNG 120 (451)
T ss_pred CCCEEEEcccCHHhhcCCCC-CHHHHHHHHHHHH--hc-CC-cCCcc-CCHHHHHHHHHHHHhCCC--CCCEEEE--cCC
Confidence 45678899777421222321 2334444444443 11 11 11111 122334444443322110 1257777 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-HcCC-----------eeeEEEeecCCC--CC--cC-------H
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AAGL-----------AMKTYHYYDPKT--NG--LD-------F 176 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~G~-----------~~~~v~~~~~~~--~~--~d-------~ 176 (280)
|++|.+.+.++........+|+...-+|.+...... ..|. .+..++..+... +. -| +
T Consensus 121 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06062 121 GADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL 200 (451)
T ss_pred hHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence 999999995443332233678888888876643322 1111 112222100000 10 12 5
Q ss_pred HHHHHHHhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCe
Q 023599 177 QGMLQDLGAA-PSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGE 254 (280)
Q Consensus 177 ~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 254 (280)
+.+++.+... +.+..+|++..-..--|.+ .+.+-+++|.++|++||+++|.||+...|.-.. ..+. ....+..+.
T Consensus 201 ~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG--~~~a-~~~~gv~PD 277 (451)
T PRK06062 201 AHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG--KWFA-IEHFGVVPD 277 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCc--HHHH-HHhcCCCCC
Confidence 7778877543 2334455554444334555 467889999999999999999999998763221 1111 111122334
Q ss_pred EEEEeccccccccccc-ccceEEEE
Q 023599 255 CLVAQSYSKTMGLYGE-RVGALSVV 278 (280)
Q Consensus 255 ~i~~~S~SK~~~~~G~-RvG~~v~~ 278 (280)
+ -.|+|.++ .|+ -+|.++..
T Consensus 278 i---~t~gK~lg-gG~~Pigav~~~ 298 (451)
T PRK06062 278 L---ITFAKGVN-SGYVPLGGVAIS 298 (451)
T ss_pred e---eeechhhh-cCCcCcEEEEEc
Confidence 3 46799998 674 78877654
No 325
>PRK07482 hypothetical protein; Provisional
Probab=98.46 E-value=2.3e-05 Score=72.72 Aligned_cols=224 Identities=13% Similarity=0.038 Sum_probs=118.9
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...||+..|.....-|+. .++.+++..+++.+ ....+.+ .. -..+.+..+|+.+...-. -..+.+.+ +++
T Consensus 48 dG~~ylD~~sg~~~~~lGh~-~p~v~~Av~~q~~~-~~~~~~~-~~-~~~~~~~~lAe~L~~~~p--~~~~~v~f--~~s 119 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYG-RTEVAEAIAEQAKE-LAYYHTY-VG-HGTEASITLSKRIIDRAP--AGMSKVYY--GLS 119 (461)
T ss_pred CCCEEEEcccchhhhcCCCC-CHHHHHHHHHHHHh-cCccccc-cc-cCCHHHHHHHHHHHHhCC--CCcCEEEE--eCc
Confidence 45678999888532222322 33444444444441 1111111 00 112334444444432211 11267777 999
Q ss_pred chhHHHHHHHHHHhh----c-CC-CEEEEeCCCCCChHHHHHHc----------C---CeeeEEEeecCCCC---C----
Q 023599 120 GSGSLRIGADFLAKH----Y-YQ-HTVYLSQPTYGNHPNFFAAA----------G---LAMKTYHYYDPKTN---G---- 173 (280)
Q Consensus 120 ~~~al~~~~~~~~~~----~-~G-d~Vli~~P~y~~~~~~~~~~----------G---~~~~~v~~~~~~~~---~---- 173 (280)
|++|.+.+..+.... . +| .+|+...-+|.+........ + ..+..++....... +
T Consensus 120 GSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 199 (461)
T PRK07482 120 GSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEE 199 (461)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHH
Confidence 999999995544321 1 23 57888888887753221111 1 01122221000000 0
Q ss_pred ----cCHHHHHHHHhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH
Q 023599 174 ----LDFQGMLQDLGAA-PSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM 247 (280)
Q Consensus 174 ----~d~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 247 (280)
.+.+.+++.+... +.+...|++..-..-.|.. .+.+-+++|.++|++||+++|.||+...|.--. .... ..
T Consensus 200 ~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG--~~~a-~~ 276 (461)
T PRK07482 200 QFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLG--SMFG-SD 276 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc--chhh-HH
Confidence 1357778777532 3344566655444445666 567789999999999999999999998884321 1111 11
Q ss_pred hhhcCCeEEEEeccccccccccc-ccceEEEE
Q 023599 248 FVADGGECLVAQSYSKTMGLYGE-RVGALSVV 278 (280)
Q Consensus 248 ~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~~ 278 (280)
..+..+++++ ++|.++ .|+ -+|.+++.
T Consensus 277 ~~gv~PDiv~---~gKgl~-gG~~Pi~av~~~ 304 (461)
T PRK07482 277 HYGIEPDLIT---VAKGLT-SAYAPLSGSIVG 304 (461)
T ss_pred hcCCCCCEEE---Eccccc-cCccccceeeec
Confidence 2233446664 589887 574 67766653
No 326
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.46 E-value=4.8e-06 Score=74.04 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=100.1
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhc-CC----CEEEEeCCCCCCh
Q 023599 79 DKEYLP---ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHY-YQ----HTVYLSQPTYGNH 150 (280)
Q Consensus 79 ~~~y~~---~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~-~G----d~Vli~~P~y~~~ 150 (280)
.+.|.| .+|..++...+.+||..-.+- +.|.+-.-.|+++=..-+..+.+... .| +.|+||+..++..
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 455666 467777777777777554432 56655333444332222211222222 33 6899999999988
Q ss_pred HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEccc
Q 023599 151 PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCA 230 (280)
Q Consensus 151 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~ 230 (280)
...+...|.+++.|++ .+++.+|+++|++++.++.. .++++||| ..-+-.+.+++|+++..++|..+-.|-+
T Consensus 171 PASAam~G~~VV~V~~--~~~G~VDlddLk~k~~~~~A---alMiTnPs---T~GvFE~~I~ei~~ivH~~Gg~vY~DGA 242 (496)
T COG1003 171 PASAAMAGFKVVVVKC--DENGNVDLDDLRAKAEDNLA---ALMITNPS---TLGVFEEDIREICEIVHEAGGQVYYDGA 242 (496)
T ss_pred hhhHhhcCceEEEEec--CCCCCccHHHHHHHhcccee---EEEeccCc---ccccchhhHHHHHHHHHHcCCEEEecCc
Confidence 8888999999999999 44568999999999986543 77775553 4446788899999999999999999987
Q ss_pred CCC
Q 023599 231 YQG 233 (280)
Q Consensus 231 y~~ 233 (280)
.-.
T Consensus 243 NlN 245 (496)
T COG1003 243 NLN 245 (496)
T ss_pred chh
Confidence 633
No 327
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.45 E-value=1.3e-05 Score=73.72 Aligned_cols=208 Identities=17% Similarity=0.198 Sum_probs=110.1
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCC-CCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYL-PITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...||+..|.-...-|+. .+..++++.+++. ... .+. +.....+|.+.+++.+-+ .+.+.+ ++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~--~~~--~~~~~~~~~~~la~~l~~~~p~-------~~~v~f--~~ 111 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHA-YPPVVEAVREALQ--DGC--NFTRPSAIELDAAESFLELIDG-------ADMVKF--CK 111 (431)
T ss_pred CCCEEEEccccccchhcCCC-CHHHHHHHHHHHH--hCc--CCCCCCHHHHHHHHHHHHhCCc-------cceEEE--ec
Confidence 45678999877421222321 2334444444444 221 122 111112345555554311 256777 99
Q ss_pred cchhHHHHHHHHHHhhcCCC-EEEEe-CCCCCChHHHH-----HHcCCe--e--eEEEeecCCCCCcCHHHHHHHHhcCC
Q 023599 119 SGSGSLRIGADFLAKHYYQH-TVYLS-QPTYGNHPNFF-----AAAGLA--M--KTYHYYDPKTNGLDFQGMLQDLGAAP 187 (280)
Q Consensus 119 g~~~al~~~~~~~~~~~~Gd-~Vli~-~P~y~~~~~~~-----~~~G~~--~--~~v~~~~~~~~~~d~~~l~~~~~~~~ 187 (280)
+|++|.+.+.++.... .|. +|+.. .-+|..+.... ...|.. . ..+.+ + .-|++.+++.+.+..
T Consensus 112 sGseA~e~AlklAr~~-tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~d~~~l~~~l~~~~ 185 (431)
T PRK06209 112 NGSDATSAAVRLARAY-TGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF--R---YNDIASLEALFEDHP 185 (431)
T ss_pred CHHHHHHHHHHHHHHH-hCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc--C---CCCHHHHHHHHHhCC
Confidence 9999999995543322 443 45443 22222111000 000110 0 01111 1 127899999886543
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccc
Q 023599 188 SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGL 267 (280)
Q Consensus 188 ~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 267 (280)
.+..+|++. | -.|...+.+.+++|.++|++|++++|.||+...+.... .......+..+. +.+++|.+|
T Consensus 186 ~~~aavi~E-p--v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~----~g~~~~~gv~PD---i~t~gK~lg- 254 (431)
T PRK06209 186 GRIACVILE-P--ATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM----RGAQKLYGIVPD---LSCFGKALG- 254 (431)
T ss_pred CCEEEEEEc-c--ccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc----chhhHHhCCCcc---eeeehhhhc-
Confidence 334444443 3 23446678889999999999999999999986664321 011111122223 467899998
Q ss_pred cccccceEEEE
Q 023599 268 YGERVGALSVV 278 (280)
Q Consensus 268 ~G~RvG~~v~~ 278 (280)
.|+-+|.+++.
T Consensus 255 gG~p~~av~~~ 265 (431)
T PRK06209 255 NGFAVSALAGK 265 (431)
T ss_pred CCcccEEEEEH
Confidence 68888887764
No 328
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.45 E-value=5.4e-06 Score=76.78 Aligned_cols=158 Identities=21% Similarity=0.233 Sum_probs=109.9
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY 167 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~ 167 (280)
+.+..+..|+. ++.+ .-..+ ++|.+.|+.++ +.+.+.+||.|+++..++-.....+...|+.++++.-.
T Consensus 72 i~eAqe~aA~~-fgAd------~tyFv--vNGTS~ank~v--i~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~ 140 (557)
T COG1982 72 IKEAQELAARV-FGAD------HTYFV--VNGTSTANKAV--INAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPS 140 (557)
T ss_pred HHHHHHHHHHH-hCCC------ceEEE--ECCccHHHHHH--HHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCC
Confidence 34555555555 4442 23344 99999999999 89999999999999999987777788899998887542
Q ss_pred -cC-CC--CCcCHHHHHHHHhcCCCCcEEEEecCCCCCC--CCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 168 -DP-KT--NGLDFQGMLQDLGAAPSGAIVLLQASGHNPT--GIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 168 -~~-~~--~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPT--G~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
++ -+ .+++.+.+++++.+++...++++++ ||| |++++ .++|++++.+.++|+..|++..-. ++.. +
T Consensus 141 ~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vit---npTYdGv~~n---~~~i~~~~~~~~a~v~~deah~~~-~~~~-~ 212 (557)
T COG1982 141 RNPLYGIIGGIPLETFKEALLAHPDAEKLAVIT---NPTYDGVCYN---LRKIVELLHHYGAWVLYDEAHPAH-FDFS-P 212 (557)
T ss_pred CCccccccCCCCHHHHHHHHHhChhhheeEEEe---cCccceEeec---HHHHHHHHhhcCceEEhhhcCccc-cccc-c
Confidence 22 12 6789999999998875431466663 555 66666 456678888899999999976433 2211 1
Q ss_pred hhHHHHhhhcCCeEEEEeccccccc
Q 023599 242 ALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
..+- .......+++..|.-|..+
T Consensus 213 ~l~~--~~~~~~~~~~tqS~HK~l~ 235 (557)
T COG1982 213 MLPE--SALNGGADFVTQSTHKLLA 235 (557)
T ss_pred cCcc--hhhhcCceEEEechhhhhh
Confidence 1111 1122457889999999874
No 329
>PRK07046 aminotransferase; Validated
Probab=98.44 E-value=3.1e-05 Score=71.67 Aligned_cols=155 Identities=11% Similarity=0.021 Sum_probs=91.5
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH-HHH-cCCeee------EEE--ee---cCCCCCcCH
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF-FAA-AGLAMK------TYH--YY---DPKTNGLDF 176 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~-~~~-~G~~~~------~v~--~~---~~~~~~~d~ 176 (280)
+.+.+ +++|++|.+.+.++.......++|+...-+|.++... +.. .+.+.. .++ .. ....+ -|+
T Consensus 131 ~~v~F--~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~ 207 (453)
T PRK07046 131 PYWQV--ATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDL 207 (453)
T ss_pred CEEEE--ECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCH
Confidence 67777 9999999999955443332346788888888776322 111 000000 000 00 00011 278
Q ss_pred HHHHHHHhcCCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeE
Q 023599 177 QGMLQDLGAAPSGAIVLLQASGHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGEC 255 (280)
Q Consensus 177 ~~l~~~~~~~~~~~~~v~~~~p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 255 (280)
+.+++.+.. .+...|++..-..-.|. ..+.+-++++.++|+++|+++|.||+.. |...... . ....+..+.+
T Consensus 208 ~~l~~~l~~--~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg-~---~~~~gv~PDi 280 (453)
T PRK07046 208 AALEAALAD--GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGG-Y---TRAHGLEPDF 280 (453)
T ss_pred HHHHHHhCC--CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcc-h---hHHhCCCccc
Confidence 999988853 23445554433322343 3456789999999999999999999986 4332111 1 1222323455
Q ss_pred EEEecccccccccccccceEEEE
Q 023599 256 LVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 256 i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+ .|+|.++ .|+-+|.++..
T Consensus 281 ~---t~gK~lg-gG~Pi~av~g~ 299 (453)
T PRK07046 281 L---VVGKPIA-GGVPCAVYGFS 299 (453)
T ss_pred e---eehhhhc-CCCcceeeeeh
Confidence 4 4799998 68888876653
No 330
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.44 E-value=2.6e-05 Score=71.68 Aligned_cols=159 Identities=13% Similarity=0.054 Sum_probs=91.9
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHH-HHHcCC-------------eeeEEEeecC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNF-FAAAGL-------------AMKTYHYYDP 169 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~-~~~~G~-------------~~~~v~~~~~ 169 (280)
+.+.+ +++|++|.+.+..+.... .+| .+|+.-.-+|.+.... +...|- .+..+|..+.
T Consensus 105 ~~v~f--~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 182 (429)
T PRK06173 105 NKIFF--ADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI 182 (429)
T ss_pred CEEEE--eCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc
Confidence 67777 999999999985443322 133 5788888888774211 111110 1122222000
Q ss_pred C---CC-CcCHHHHHHHHhcCCCCcEEEEecCC-CCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChh
Q 023599 170 K---TN-GLDFQGMLQDLGAAPSGAIVLLQASG-HNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 170 ~---~~-~~d~~~l~~~~~~~~~~~~~v~~~~p-~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 243 (280)
. .+ .-+++.+++.+.....+...+++..- +.-.|.. .+++-++++.++|++||+++|.||++..|.... ...
T Consensus 183 ~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG--~~~ 260 (429)
T PRK06173 183 KFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG--KLF 260 (429)
T ss_pred ccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC--cch
Confidence 0 00 01366677777644444556666542 5555655 688889999999999999999999996653221 111
Q ss_pred HHHHhhhcCCeEEEEeccccccccccc-ccceEEE
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLYGE-RVGALSV 277 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~ 277 (280)
.. ...+..+.+++ |+|.++ .|. =+|-+++
T Consensus 261 a~-~~~gv~PDiv~---~gK~l~-gG~~p~~a~~~ 290 (429)
T PRK06173 261 AL-EHAGVVPDIMC---IGKALT-GGYLTLSATIT 290 (429)
T ss_pred HH-HhcCCCCCEEE---eehhhh-CCccccceEEe
Confidence 11 11222334443 899996 563 4555543
No 331
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.43 E-value=2e-05 Score=70.92 Aligned_cols=207 Identities=17% Similarity=0.158 Sum_probs=123.2
Q ss_pred CCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccc
Q 023599 41 SPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
+...||+-.+.= +..+--..+.+.++.++... .+ ..|..+. ++.-.+|+.+...-. ..+.+-+ +++|
T Consensus 52 Gn~YIDy~~~~G--p~ilGH~~p~V~~Av~~~l~-~G--~~fg~Pt---e~Ei~~Aell~~~~p---~~e~vrf--vnSG 118 (432)
T COG0001 52 GNEYIDYVLGWG--PLILGHAHPAVVEAVQEQLE-RG--LSFGAPT---ELEVELAELLIERVP---SIEKVRF--VNSG 118 (432)
T ss_pred CCEeeehhccCc--ccccCCCCHHHHHHHHHHHH-hc--CCCCCCC---HHHHHHHHHHHHhcC---cccEEEE--ecch
Confidence 456777765541 12222333445444444331 33 3454442 333444554433321 1377778 9999
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-HcC--C-----------------eeeEEEeecCCCCCcCHHHHH
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-AAG--L-----------------AMKTYHYYDPKTNGLDFQGML 180 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-~~G--~-----------------~~~~v~~~~~~~~~~d~~~l~ 180 (280)
|+|...+.++..-...-|+|+..+-+|.++.+.+. ..| . ....+|+ -|++.++
T Consensus 119 TEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~ 191 (432)
T COG0001 119 TEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALE 191 (432)
T ss_pred hHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHH
Confidence 99999885544333344899999999987755543 222 1 1122222 3899999
Q ss_pred HHHhcCCCCc-EEEEecCCCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEE
Q 023599 181 QDLGAAPSGA-IVLLQASGHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVA 258 (280)
Q Consensus 181 ~~~~~~~~~~-~~v~~~~p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~ 258 (280)
+++.+...+. .+++=+-+.| -|. ...++-++.|.++|+++|+++|.||+.-.|..... ..+....+ .+. +
T Consensus 192 ~~~~~~g~~IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~g-Gaq~~~gi---~PD---l 263 (432)
T COG0001 192 EAFEEYGDDIAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALG-GAQGYYGV---EPD---L 263 (432)
T ss_pred HHHHHcCCcEEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCc-ccccccCc---Ccc---h
Confidence 9998875444 4455445555 233 34567789999999999999999999987766421 12111111 112 5
Q ss_pred ecccccccccccccceEE
Q 023599 259 QSYSKTMGLYGERVGALS 276 (280)
Q Consensus 259 ~S~SK~~~~~G~RvG~~v 276 (280)
..|.|..| -|+-+|.+-
T Consensus 264 ttlGKiIG-GGlP~ga~g 280 (432)
T COG0001 264 TTLGKIIG-GGLPIGAFG 280 (432)
T ss_pred hhhhhhhc-CCcceeeec
Confidence 67899998 888888653
No 332
>PRK05965 hypothetical protein; Provisional
Probab=98.42 E-value=4.2e-05 Score=70.98 Aligned_cols=222 Identities=14% Similarity=0.080 Sum_probs=118.8
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCC--CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEY--LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
.+...||+..|.....-|+- .+..++++.+++.+ -.....+ .......+|-+.+++..- -..+.+.+ +
T Consensus 44 dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~-~~~~~~~~~~~~~~~~~lae~L~~~~p------~~~~~v~f--~ 113 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYG-QESIVEAAAEQMRE-LPYATGYFHFGSEPAIRLAAKLAERAP------GSLNHVYF--T 113 (459)
T ss_pred CCCEEEECcccHHhccCCCC-CHHHHHHHHHHHHh-cCCcccccccCCHHHHHHHHHHHhhCC------CCcCEEEE--e
Confidence 45678999777431222322 33444444444441 1111111 011112234444444321 11256777 9
Q ss_pred ccchhHHHHHHHHHHhh----c-CC-CEEEEeCCCCCChHHHHHH-c---------CC---eeeEEEeecCCC--CCcC-
Q 023599 118 LSGSGSLRIGADFLAKH----Y-YQ-HTVYLSQPTYGNHPNFFAA-A---------GL---AMKTYHYYDPKT--NGLD- 175 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~----~-~G-d~Vli~~P~y~~~~~~~~~-~---------G~---~~~~v~~~~~~~--~~~d- 175 (280)
++|++|.+.+.++.... . +| .+|+...-+|.+....... . |. .+..++...... +.-|
T Consensus 114 ~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (459)
T PRK05965 114 LGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP 193 (459)
T ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh
Confidence 99999999995543322 1 33 5788888899776432111 1 10 112222200000 1123
Q ss_pred -------HHHHHHHHhcCC-CCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHH
Q 023599 176 -------FQGMLQDLGAAP-SGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVR 246 (280)
Q Consensus 176 -------~~~l~~~~~~~~-~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 246 (280)
++.+++.+.+.. .+...|++..-+.-.|.. .+.+-++++.++|++||+++|.||+...|.--. ..+...
T Consensus 194 ~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG--~~~a~~ 271 (459)
T PRK05965 194 QAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTG--PLFACE 271 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCc--hhhhHh
Confidence 256777776432 344566665555555654 577888999999999999999999998884321 111111
Q ss_pred HhhhcCCeEEEEeccccccccccc-ccceEEEE
Q 023599 247 MFVADGGECLVAQSYSKTMGLYGE-RVGALSVV 278 (280)
Q Consensus 247 ~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~~ 278 (280)
..+..+++++ ++|.++ .|+ -+|.+++.
T Consensus 272 -~~gv~PDiv~---~gKgl~-gG~~Pi~av~~~ 299 (459)
T PRK05965 272 -AEGVVPDLMT---VAKGLT-SGYVPMGAVLMS 299 (459)
T ss_pred -hcCCCCCeEE---echhhc-cCCcceeEEEEc
Confidence 1233345554 589997 684 88877764
No 333
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.41 E-value=4.4e-05 Score=70.74 Aligned_cols=160 Identities=9% Similarity=-0.009 Sum_probs=95.1
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHH-HHHcC------------CeeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNF-FAAAG------------LAMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~-~~~~G------------~~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+..+.... .+| .+|+...-+|.+.... +...| ..+..++..+..
T Consensus 115 ~~v~f--~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~ 192 (453)
T PRK06943 115 GHAFF--ASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDAR 192 (453)
T ss_pred CEEEE--eCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcc
Confidence 46777 999999999995443211 133 5788888888765321 11111 012223321110
Q ss_pred C--CC--------cCHHHHHHHHhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 171 T--NG--------LDFQGMLQDLGAAPSGAIVLLQAS-GHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 171 ~--~~--------~d~~~l~~~~~~~~~~~~~v~~~~-p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
. +. -+++.+++.+.....+...|++.. .+.-.|. ..+.+-++++.++|++||+++|.||+...|.--.
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG 272 (453)
T PRK06943 193 GARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG 272 (453)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc
Confidence 0 00 124677777764444455666553 2455565 4678889999999999999999999998874321
Q ss_pred CCChhHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
..+.. ...+..++++++ +|.++ .| +-+|.+++.
T Consensus 273 --~~fa~-~~~gv~PDivt~---gKgl~-gG~~Pi~av~~~ 306 (453)
T PRK06943 273 --TFFAC-EQAGVWPDFLCL---SKGIS-GGYLPLSLVLSR 306 (453)
T ss_pred --chhHH-HhCCCCCCeEee---ehhhc-cCcccceEEEEc
Confidence 11111 122333466654 89987 68 478877654
No 334
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.40 E-value=2e-06 Score=77.78 Aligned_cols=154 Identities=12% Similarity=0.119 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecc-cchhHHHHHHHHHHhhcC-CCEEEEeCCCCCC-hHH-HHHHcCC-eee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCL-SGSGSLRIGADFLAKHYY-QHTVYLSQPTYGN-HPN-FFAAAGL-AMK 162 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~-g~~~al~~~~~~~~~~~~-Gd~Vli~~P~y~~-~~~-~~~~~G~-~~~ 162 (280)
..+.|+.+++++... .+++|++ +. ++|.+++++ +.+++.+ ++.|++ .-.|+. +.. ..+.+|+ +++
T Consensus 50 ~~~~r~~l~~l~~~~-----~~~~v~~--~~gs~T~~~~~~--~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~ 119 (378)
T PRK03080 50 LKRVIEGTRELLSLP-----EGYEVGI--VPGSDTGAWEMA--LWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPR 119 (378)
T ss_pred HHHHHHHHHHHhCCC-----CCceEEE--ECCchHHHHHHH--HHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCce
Confidence 356777777775432 1256776 64 899999999 7777764 444444 323322 222 2256788 888
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
.++. +++..+|++.++ . ++ .|.+++..|.||...+.+++ ++ +++|+++++|.+..-...+-+ .
T Consensus 120 ~~~~--~~g~~~d~~~i~----~-~~---~V~~~h~~t~tG~~~pi~~I---~~--~~~g~~~vVDa~qs~G~~pid--v 182 (378)
T PRK03080 120 VLEA--DYGSLPDLSAVD----F-DR---DVVFTWNGTTTGVRVPVARW---IG--ADREGLTICDATSAAFALPLD--W 182 (378)
T ss_pred Eecc--CCCCCCCHhhcC----C-CC---CEEEEecCCccceeccchhh---cc--ccCCCeEEEecccccccCCCC--H
Confidence 8886 344567766533 2 23 46778889999999985544 55 778999999998766555321 1
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
..+ . +++.|.-|.++. --.+|++++.
T Consensus 183 ---~~i-----D-~~~~s~~K~l~~-P~G~g~l~v~ 208 (378)
T PRK03080 183 ---SKL-----D-VYTFSWQKVLGG-EGGHGMAILS 208 (378)
T ss_pred ---HHC-----c-EEEEehhhhCCC-CCceEEEEEC
Confidence 111 2 667888898853 2345655543
No 335
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.39 E-value=5e-05 Score=70.56 Aligned_cols=160 Identities=13% Similarity=0.027 Sum_probs=94.0
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh----c-CC-CEEEEeCCCCCChHHHHHHc-CC------------eeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH----Y-YQ-HTVYLSQPTYGNHPNFFAAA-GL------------AMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~----~-~G-d~Vli~~P~y~~~~~~~~~~-G~------------~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+..+.... . +| .+|+...-+|.+........ |. .+..+|..+..
T Consensus 108 ~~v~f--~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~ 185 (466)
T PRK07030 108 SRCFY--ADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCY 185 (466)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcc
Confidence 57777 999999999995443221 1 33 57888888887654332221 11 12223221000
Q ss_pred --CCC--------cCHHHHHHHHhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 171 --TNG--------LDFQGMLQDLGAAPSGAIVLLQAS-GHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 171 --~~~--------~d~~~l~~~~~~~~~~~~~v~~~~-p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
..+ -+++.+++.+.+...+...|++.. .+.-.|. ..+++-+++|.++|++||+++|.||+...|.--.
T Consensus 186 ~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG 265 (466)
T PRK07030 186 LRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG 265 (466)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc
Confidence 001 124566777765444445555543 2333455 4567889999999999999999999998774321
Q ss_pred CCChhHHHHhhhcCCeEEEEeccccccccccc-ccceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGE-RVGALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~~ 278 (280)
..+. ....+..+.++++ +|.++ .|+ -+|.+++.
T Consensus 266 --~~~a-~~~~gv~PDiv~~---gKgl~-gG~~Pi~av~~~ 299 (466)
T PRK07030 266 --TMFA-CEQAGIRPDFLCL---SKALT-GGYLPLAAVLTT 299 (466)
T ss_pred --cchH-HHhcCCCCCEEee---ehhcc-CCcccceEEEec
Confidence 1111 1122333455544 89988 684 78877764
No 336
>PRK12403 putative aminotransferase; Provisional
Probab=98.39 E-value=5.6e-05 Score=70.16 Aligned_cols=222 Identities=14% Similarity=0.087 Sum_probs=111.9
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCC--CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEY--LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
.+...||+..|.....-|+ -.+..++++.+++.+ -.....+ .......+|.+.+++++-. ..+.+.+ +
T Consensus 52 dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~-~~~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~v~f--~ 121 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQ-LPYYNMFFHTTHPAVIELSELLFSLLPG------HYSHAIY--T 121 (460)
T ss_pred CCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHh-CCCeecccccCCHHHHHHHHHHHHhCCC------CcCEEEE--e
Confidence 3567899877743222343 233444444444441 1100001 0111123444555444211 1256777 9
Q ss_pred ccchhHHHHHHHHHHhh-----cCCCE-EEEeCCCCCChHH-HHHHcCCe-----------eeEEEeecC--CCCCc---
Q 023599 118 LSGSGSLRIGADFLAKH-----YYQHT-VYLSQPTYGNHPN-FFAAAGLA-----------MKTYHYYDP--KTNGL--- 174 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~-----~~Gd~-Vli~~P~y~~~~~-~~~~~G~~-----------~~~v~~~~~--~~~~~--- 174 (280)
++|++|.+.+..+.... ++++. |+...-+|.+... .+...|.. +..+|.... ..+..
T Consensus 122 ~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 201 (460)
T PRK12403 122 NSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPA 201 (460)
T ss_pred CCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChH
Confidence 99999999995444322 23333 4455567765422 22222211 222221000 00011
Q ss_pred -----CHHHHHHHHhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH
Q 023599 175 -----DFQGMLQDLGAA-PSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM 247 (280)
Q Consensus 175 -----d~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 247 (280)
+.+.+++.+.+. ..+..+|++..-..--|.+ .+.+-+++|.++|++||+++|.||+...|.-.. .... ..
T Consensus 202 ~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG--~~~a-~e 278 (460)
T PRK12403 202 EFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG--EWFA-HE 278 (460)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--hhhh-hh
Confidence 124565555432 2334455555444444654 467778999999999999999999997764321 1111 11
Q ss_pred hhhcCCeEEEEeccccccccccc-ccceEEEE
Q 023599 248 FVADGGECLVAQSYSKTMGLYGE-RVGALSVV 278 (280)
Q Consensus 248 ~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~~ 278 (280)
..+..+++++ ++|.++ .|+ -+|.+++.
T Consensus 279 ~~gv~PDiv~---~gK~lg-gG~~Piga~v~~ 306 (460)
T PRK12403 279 HFGFEPDTLS---IAKGLT-SGYVPMGGLVLS 306 (460)
T ss_pred hcCCCCCeEE---Eccccc-ccccceEEEEEC
Confidence 1222345553 899998 674 78877653
No 337
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.37 E-value=4.4e-05 Score=70.49 Aligned_cols=160 Identities=15% Similarity=0.074 Sum_probs=92.2
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhc-----CC-CEEEEeCCCCCChHHHHH-Hc---------C---CeeeEEEeecC-
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHY-----YQ-HTVYLSQPTYGNHPNFFA-AA---------G---LAMKTYHYYDP- 169 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~-----~G-d~Vli~~P~y~~~~~~~~-~~---------G---~~~~~v~~~~~- 169 (280)
+.+.+ +++|++|.+.+..+..... +| .+|+...-+|.+.....- .. + ..+..+|....
T Consensus 107 ~~v~f--~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~ 184 (442)
T PRK13360 107 NHVFF--TNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDL 184 (442)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchh
Confidence 56777 9999999999854433221 22 578888888877532111 11 1 11223332100
Q ss_pred C--CCCc--------CHHHHHHHHhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 170 K--TNGL--------DFQGMLQDLGAA-PSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 170 ~--~~~~--------d~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
. .+.. ..+.+++.+... ..+..+|++..-.--.|.. .+.+-+++|.++|++|++++|.||++..|.--
T Consensus 185 ~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Grt 264 (442)
T PRK13360 185 ARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRL 264 (442)
T ss_pred hccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence 0 0111 145777777533 2344566655544445554 46777899999999999999999999776321
Q ss_pred cCCChhHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 238 MDADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
.. ... ....+....++ +|+|.++ .| +-+|.+++.
T Consensus 265 G~--~~a-~~~~gv~PDiv---t~gK~l~-gG~~P~gav~~~ 299 (442)
T PRK13360 265 GA--PFA-AQYFGVTPDLL---TCAKGLT-NGAIPMGAVFVS 299 (442)
T ss_pred cc--chh-hhhcCCCCcee---eeeeccc-cCccceEEEEEc
Confidence 11 111 11112223433 7899997 46 577776553
No 338
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.36 E-value=4e-05 Score=68.15 Aligned_cols=210 Identities=17% Similarity=0.097 Sum_probs=127.9
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHH-HHHHHHhCCCCccccCCCeEEeecccc
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNK-LSAKLIFGADSPAIKENRVSTVQCLSG 120 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~-~ia~~l~~~~~~~~~~~~i~~v~t~g~ 120 (280)
..+||.+-...++.-|.....+..-.+...+.+ ....+.|+-..|...-|- .+++.+.+..+ .+.+++ ++..
T Consensus 20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~-~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~----aea~~i--vnnn 92 (395)
T COG1921 20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMR-APVELETDLKTGKRGARLTELAELLCGLTG----AEAAAI--VNNN 92 (395)
T ss_pred hhhhhhhhhheeccCCCccCCHHHHHHHHHHhc-ccceeeeecccchhhHHHHHHHHHHhcccc----hhheee--ECCc
Confidence 356666543333334444444433334444442 333446666555543333 33444433322 356666 8888
Q ss_pred hhHHHHHHHHHHhhcCCCEEEEeC-----CCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEe
Q 023599 121 SGSLRIGADFLAKHYYQHTVYLSQ-----PTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQ 195 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd~Vli~~-----P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~ 195 (280)
+.|+.++ +.++.. +.+|++.. ++-++..+.++..|++++++... ......+++.++.+++. .++-+
T Consensus 93 ~aAVll~--~~al~~-~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ta--~llkV 163 (395)
T COG1921 93 AAAVLLT--LNALAE-GKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINENTA--LLLKV 163 (395)
T ss_pred HHHHHHH--Hhhhcc-CCeEEEEccccccCCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccCCe--eEEEE
Confidence 8888887 555544 54555542 46678899999999999998752 23678999999998865 22222
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccccccceE
Q 023599 196 ASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYGERVGAL 275 (280)
Q Consensus 196 ~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~ 275 (280)
-+.|.+--..++ +++++++|+++++++++|.+-...+.. . +.++.+...+..+ +++|--|.++ |-+-|.+
T Consensus 164 ~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~-e---~~l~~~la~GaDL-V~~SgdKllg--GPqaGii 233 (395)
T COG1921 164 HSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDK-E---PDLREALALGADL-VSFSGDKLLG--GPQAGII 233 (395)
T ss_pred eecccccccccc---HHHHHHHHHHcCCCEEEecCCcccccc-c---cchhHHHhcCCCE-EEEecchhcC--CCccceE
Confidence 223322222233 456789999999999999998877652 1 1224444555444 4889999987 7788877
Q ss_pred EE
Q 023599 276 SV 277 (280)
Q Consensus 276 v~ 277 (280)
+.
T Consensus 234 ~G 235 (395)
T COG1921 234 VG 235 (395)
T ss_pred ec
Confidence 64
No 339
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.36 E-value=6.5e-05 Score=69.10 Aligned_cols=220 Identities=9% Similarity=-0.048 Sum_probs=113.7
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCC-CCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSA-DKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...+||..|.-...-|+ -.+..++++.+++.+ ... ...+.......+|-+.+++..- . .-+.+.+ ++
T Consensus 43 dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~-~-----~~~~v~f--~~ 112 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGY-NHPRLNAAAQKQIDK-MSHVMFGGFTHKPAIELCQKLVKMTP-N-----ALDCVFL--AD 112 (427)
T ss_pred CCCEEEEccchHHHhcCCC-CCHHHHHHHHHHHHh-cCCccccccCCHHHHHHHHHHHhhCC-C-----CCCEEEE--eC
Confidence 3567899977642111232 223344444444431 110 1111122223345555555421 1 1257777 99
Q ss_pred cchhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHHHHH-cCCe-------------eeEEEeecCCCC-----C
Q 023599 119 SGSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNFFAA-AGLA-------------MKTYHYYDPKTN-----G 173 (280)
Q Consensus 119 g~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~~~~-~G~~-------------~~~v~~~~~~~~-----~ 173 (280)
+|++|.+.+..+.... .+| .+|+...-+|.+....+.. .|.. +..++. ....+ .
T Consensus 113 sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~ 191 (427)
T TIGR00508 113 SGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNE 191 (427)
T ss_pred CcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHH
Confidence 9999999884433221 133 5788888888765432222 1210 111211 00001 1
Q ss_pred cCHHHHHHHHhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhc
Q 023599 174 LDFQGMLQDLGAAPSGAIVLLQAS-GHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVAD 251 (280)
Q Consensus 174 ~d~~~l~~~~~~~~~~~~~v~~~~-p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 251 (280)
.|++.+++.+.+...+..+|++.. .+.--|. ..+.+.+++|.++|++|++++|+||++..+.... .. .. ....+.
T Consensus 192 ~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G-~~-~~-~~~~~v 268 (427)
T TIGR00508 192 EAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG-KL-FA-CEHAGV 268 (427)
T ss_pred HHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC-cc-ch-hhhcCC
Confidence 146777777765433344555443 1444454 4478999999999999999999999997664321 11 11 111122
Q ss_pred CCeEEEEeccccccccccc-ccceEEE
Q 023599 252 GGECLVAQSYSKTMGLYGE-RVGALSV 277 (280)
Q Consensus 252 ~~~~i~~~S~SK~~~~~G~-RvG~~v~ 277 (280)
...+++ ++|.++ .|+ -++.++.
T Consensus 269 ~pDi~~---~gK~l~-gG~~p~~a~~~ 291 (427)
T TIGR00508 269 VPDILC---VGKALT-GGYMTLSATVT 291 (427)
T ss_pred CCCEEE---echhhh-cCcccceEEEE
Confidence 334443 799996 675 3444443
No 340
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.36 E-value=7.9e-05 Score=69.17 Aligned_cols=160 Identities=11% Similarity=0.047 Sum_probs=95.2
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHHHHHc-CC------------eeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNFFAAA-GL------------AMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~~~~~-G~------------~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+.++.... .+| .+|+...-+|.+........ |. .+..+|..+..
T Consensus 117 ~~v~f--~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~ 194 (460)
T PRK06916 117 KKVFY--SDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTY 194 (460)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCccc
Confidence 56777 999999999995543321 233 57888888887754322221 11 12223221000
Q ss_pred --CCC--------cCHHHHHHHHhcCCCCcEEEEecC-CCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 171 --TNG--------LDFQGMLQDLGAAPSGAIVLLQAS-GHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 171 --~~~--------~d~~~l~~~~~~~~~~~~~v~~~~-p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
.+. .+++.+++.+.....+...|++.. .+.-.|.. .+++-++++.++|+++|+++|.||+...|.--.
T Consensus 195 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG 274 (460)
T PRK06916 195 RSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG 274 (460)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc
Confidence 001 135667777764444455565543 24455655 588889999999999999999999987763321
Q ss_pred CCChhHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
..... ...+..+.++ .++|.++ .| +-+|.+++.
T Consensus 275 --~~~a~-~~~gv~PDiv---~~gK~l~-gG~~Pi~av~~~ 308 (460)
T PRK06916 275 --KMFAC-EHENVTPDIM---TAGKGLT-GGYLPIAITVTT 308 (460)
T ss_pred --hhhHH-HhcCCCCCee---eeehhhh-cCccccceeeec
Confidence 11111 1223334555 4699987 67 478877654
No 341
>PRK07678 aminotransferase; Validated
Probab=98.34 E-value=8.2e-05 Score=68.92 Aligned_cols=158 Identities=11% Similarity=0.041 Sum_probs=91.9
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhc-----CC-CEEEEeCCCCCChHHHHHH-cCC------------eeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHY-----YQ-HTVYLSQPTYGNHPNFFAA-AGL------------AMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~-----~G-d~Vli~~P~y~~~~~~~~~-~G~------------~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+..+..... +| .+|+...-+|.+....... .|. .+..++. ++
T Consensus 106 ~~v~f--~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~--~~ 181 (451)
T PRK07678 106 YVIFF--SNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPP--PD 181 (451)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCC--Cc
Confidence 45666 9999999999855443221 34 5788888888765433221 111 1222222 11
Q ss_pred CCCc---------C---HHHHHHHHh-cCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 171 TNGL---------D---FQGMLQDLG-AAPSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 171 ~~~~---------d---~~~l~~~~~-~~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
.+.. | .+.+++.+. ....+...|++.....--|.+ .+.+-++++.++|++||+++|.||+...|.-
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR 261 (451)
T PRK07678 182 CYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGR 261 (451)
T ss_pred cccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCc
Confidence 1111 1 233566664 223345566655444334555 5677889999999999999999999987743
Q ss_pred CcCCChhHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 237 NMDADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
-. ..+.... .+..+.++ +++|.++ .| +-+|.+++.
T Consensus 262 tG--~~~~~~~-~gv~PDiv---t~gK~lg-gG~~Pi~av~~~ 297 (451)
T PRK07678 262 TG--KAFGFMN-YGVKPDII---TMAKGIT-SAYLPLSATAVK 297 (451)
T ss_pred Cc--hhHHHHh-cCCCCCEE---Eeecccc-cCCcceeEEEEc
Confidence 21 1112222 23334555 6699998 56 578877664
No 342
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.34 E-value=0.00013 Score=67.92 Aligned_cols=160 Identities=13% Similarity=0.037 Sum_probs=95.1
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHHHHHc-CC------------eeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNFFAAA-GL------------AMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~~~~~-G~------------~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+..+.... .+| .+|+...-+|.+........ |. .+..+|..+..
T Consensus 130 ~~v~f--~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~ 207 (472)
T PRK08742 130 SKVFY--ADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAY 207 (472)
T ss_pred CEEEE--eCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCcc
Confidence 57777 999999999995544322 133 57888888887764332221 11 12223321000
Q ss_pred --CCC--------cCHHHHHHHHhcCCCCcEEEEecC-CCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 171 --TNG--------LDFQGMLQDLGAAPSGAIVLLQAS-GHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 171 --~~~--------~d~~~l~~~~~~~~~~~~~v~~~~-p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
..+ .+++.+++.+.....+...|++.. ...-.|. ..+++-++++.++|++||+++|.||+...|..-.
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG 287 (472)
T PRK08742 208 LAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTG 287 (472)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc
Confidence 001 125667777754434455566543 2455565 4578889999999999999999999998875421
Q ss_pred CCChhHHHHhhhcCCeEEEEeccccccccccc-ccceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYGE-RVGALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~~ 278 (280)
..+... ..+..++++++ +|.++ .|+ -+|.+++.
T Consensus 288 --~~~a~e-~~gv~PDiv~~---gKgl~-gG~~Plaav~~~ 321 (472)
T PRK08742 288 --TLFACE-QAGVMPDLLCL---SKGLT-GGFLPLSAVLAT 321 (472)
T ss_pred --cchHHH-hcCCCCCEEEE---ccccc-CCCCCcceeecc
Confidence 111111 12333456644 89987 674 67776653
No 343
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.32 E-value=2.4e-05 Score=69.75 Aligned_cols=223 Identities=14% Similarity=0.079 Sum_probs=114.1
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCC-CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLP-ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...+||..|.-...-| ...+.+.++.++... . ..|.. .....+.+..+++.+...-.. ..+++.+ ++
T Consensus 14 dG~~~lD~~~~~~~~~lG--h~~p~i~~ai~~~~~-~---~~~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f--~~ 83 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLG--HNHPEIAEAIAEQAN-K---LNYVSFSGFTHPEAAELAEKLAELFPG--GLDRVFF--AN 83 (339)
T ss_dssp TSEEEEESSHHHHTTTT---BT-HHHHHHHHHHHH-H---CSSCSTTTSEEHHHHHHHHHHHHHSST--TEEEEEE--ES
T ss_pred CCCEEEECCCCccceecC--CCccccchhHHHHhh-h---cccccccceeccchhhhhhhhhhcccc--ccceeee--cc
Confidence 356788997664312222 333444444433321 1 11211 112223344444444322210 2367777 99
Q ss_pred cchhHHHHHHHHHH-----hhcCC-CEEEEeCCCCCChHHHHHHc----------C---CeeeEEEeecCCC---CCcCH
Q 023599 119 SGSGSLRIGADFLA-----KHYYQ-HTVYLSQPTYGNHPNFFAAA----------G---LAMKTYHYYDPKT---NGLDF 176 (280)
Q Consensus 119 g~~~al~~~~~~~~-----~~~~G-d~Vli~~P~y~~~~~~~~~~----------G---~~~~~v~~~~~~~---~~~d~ 176 (280)
+|++|++.+..+.. ...+| .+|+...-+|.+........ + ..+..+|..+... ..-..
T Consensus 84 sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 163 (339)
T PF00202_consen 84 SGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACL 163 (339)
T ss_dssp SHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHH
Confidence 99999999955443 02233 68998888887643222111 1 1234555411000 00001
Q ss_pred HHHHHHHhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCe
Q 023599 177 QGMLQDLGAA-PSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGE 254 (280)
Q Consensus 177 ~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 254 (280)
+.+++.+.+. .++...+++..-+--.|.. .+.+-+++|.++|++||+++|.||++..+.--.. ... ....+..+.
T Consensus 164 ~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~--~~a-~~~~gv~PD 240 (339)
T PF00202_consen 164 NALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK--FFA-SEHYGVDPD 240 (339)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS--SSG-HHHHTSSSS
T ss_pred HHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC--ccc-eecccccCc
Confidence 1233333221 2233444444333334544 4567789999999999999999999998854211 111 222344456
Q ss_pred EEEEecccccccccccccceEEEEc
Q 023599 255 CLVAQSYSKTMGLYGERVGALSVVR 279 (280)
Q Consensus 255 ~i~~~S~SK~~~~~G~RvG~~v~~~ 279 (280)
++++ +|.++ .|+-+|.+++.+
T Consensus 241 iv~~---gK~l~-gG~p~sav~~~~ 261 (339)
T PF00202_consen 241 IVTF---GKGLG-GGLPISAVLGSE 261 (339)
T ss_dssp EEEE---EGGGG-TTSSEEEEEEEH
T ss_pred cccc---ccchh-hhhhcccccccc
Confidence 6654 69998 688888887653
No 344
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.30 E-value=0.00015 Score=67.38 Aligned_cols=155 Identities=12% Similarity=0.051 Sum_probs=91.2
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH-cC------------CeeeEEEeecCCC--CC--------
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA-AG------------LAMKTYHYYDPKT--NG-------- 173 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~-~G------------~~~~~v~~~~~~~--~~-------- 173 (280)
+++|++|.+.+.++........+|+...-+|.+....... .| ..+..++..+... ++
T Consensus 133 ~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 212 (464)
T PRK06938 133 GPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVR 212 (464)
T ss_pred CCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHH
Confidence 4799999999955443222236788888888775433222 11 0123333311100 00
Q ss_pred cCHHHHHHHHhcCC---CCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhh
Q 023599 174 LDFQGMLQDLGAAP---SGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFV 249 (280)
Q Consensus 174 ~d~~~l~~~~~~~~---~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 249 (280)
.+.+.+++.+.+.. .+...|++..-.---|.+ .+.+-++++.++|++||+++|.||+...|.--. ..+. ....
T Consensus 213 ~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG--~~~a-~e~~ 289 (464)
T PRK06938 213 ANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG--KMFA-FEHA 289 (464)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--HHHH-HHhc
Confidence 13567787776421 234455554333333554 468899999999999999999999998884321 1111 1122
Q ss_pred hcCCeEEEEecccccccccccccceEEEE
Q 023599 250 ADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 250 ~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+-.++++++ +|.++ .|+-+|.++..
T Consensus 290 gv~PDiv~~---gKglg-gG~PlsAv~~~ 314 (464)
T PRK06938 290 GIIPDVVVL---SKAIG-GSLPLAVVVYR 314 (464)
T ss_pred CCCCCEEEe---ecccc-CCCceEEEeeh
Confidence 333456644 89997 68888877753
No 345
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.29 E-value=8.5e-05 Score=68.22 Aligned_cols=216 Identities=11% Similarity=0.055 Sum_probs=112.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCC--CCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEY--LPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
.+...+|+..|.....-|+. .+..+++..+++. ......+ .......+|.+.+++.. .. ..+.+.+ +
T Consensus 38 dG~~ylD~~~g~~~~~lGh~-~p~i~~ai~~q~~--~~~~~~~~~~~~~~~~~lae~L~~~~----p~--~~~~v~f--~ 106 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHG-HPRLKAAAHKQID--TMSHVMFGGLTHEPAIKLTRKLLNLT----DN--GLDHVFY--S 106 (422)
T ss_pred CCCEEEEcchhHHHhcCCCC-CHHHHHHHHHHHH--hCCCcccCCcCCHHHHHHHHHHHhhC----CC--CcCEEEE--e
Confidence 45678999877431222321 2333444444443 1111111 11111234444444432 10 1257777 9
Q ss_pred ccchhHHHHHHHHHHhhc-----CC-CEEEEeCCCCCChHHHHHH-cCC-------------eeeEEEeecCCCCCcC--
Q 023599 118 LSGSGSLRIGADFLAKHY-----YQ-HTVYLSQPTYGNHPNFFAA-AGL-------------AMKTYHYYDPKTNGLD-- 175 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~~-----~G-d~Vli~~P~y~~~~~~~~~-~G~-------------~~~~v~~~~~~~~~~d-- 175 (280)
++|++|.+.+..+..... +| .+|+...-+|.+....... .+- ....+|. +.....+
T Consensus 107 ~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~ 184 (422)
T PRK05630 107 DSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPA--PPVRGSSPQ 184 (422)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCC--CcccCCChH
Confidence 999999999855433221 23 5788888888764322221 110 1222332 1101111
Q ss_pred -----HHHHHHHHhcCCCCcEEEEecC-CCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHh
Q 023599 176 -----FQGMLQDLGAAPSGAIVLLQAS-GHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMF 248 (280)
Q Consensus 176 -----~~~l~~~~~~~~~~~~~v~~~~-p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 248 (280)
.+.+++.+.+ +...+++.. .+.-.|.. .+.+-++++.++|++||+++|.||++..+.... .... ...
T Consensus 185 ~~~~~~~~~~~~~~~---~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG--~~~a-~~~ 258 (422)
T PRK05630 185 EISEYLRSLELLIDE---TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG--ELFA-TLA 258 (422)
T ss_pred HHHHHHHHHHHHHhh---ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc--hhhH-HHh
Confidence 2334444432 334555543 25555664 567789999999999999999999997773321 1111 111
Q ss_pred hhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 249 VADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 249 ~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
.+..++++ +++|.++ .| .-+|.+++.
T Consensus 259 ~gv~PDi~---t~gK~l~-gG~~p~~av~~~ 285 (422)
T PRK05630 259 AGVTPDIM---CVGKALT-GGFMSFAATLCT 285 (422)
T ss_pred cCCCCCee---eeechhh-cCccccceeecc
Confidence 22233455 7799886 57 478877764
No 346
>PRK06105 aminotransferase; Provisional
Probab=98.29 E-value=9e-05 Score=68.82 Aligned_cols=224 Identities=14% Similarity=0.047 Sum_probs=116.2
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...||+..|.....-|+- .+..++++.+++.+ ....... .....+.+..+++.+...-.. ..+.+.+ +++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~-~~~~~~~--~~~~~~~~~~lae~L~~~~p~--~~~~v~f--~~S 117 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFS-EQRLVEAAARQMKK-LPFYHTF--SHKSHGPVIDLAEKLVAMAPV--PMSKVFF--TNS 117 (460)
T ss_pred CCCEEEEcchhHHhccCCCC-CHHHHHHHHHHHHh-CCCeecc--cccCCHHHHHHHHHHHHhCCC--CCCEEEE--eCC
Confidence 45678999877421222322 33344444444441 1111111 011122333344444322111 1256777 999
Q ss_pred chhHHHHHHHHHHhh----c-CC-CEEEEeCCCCCChHHHHHHc-CC------------eeeEEEeecCCCCC-------
Q 023599 120 GSGSLRIGADFLAKH----Y-YQ-HTVYLSQPTYGNHPNFFAAA-GL------------AMKTYHYYDPKTNG------- 173 (280)
Q Consensus 120 ~~~al~~~~~~~~~~----~-~G-d~Vli~~P~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~~------- 173 (280)
|++|.+++.++.... . +| .+|+...-+|.+........ |. .+..++..+...+.
T Consensus 118 GseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 197 (460)
T PRK06105 118 GSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEE 197 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChH
Confidence 999999995443211 1 23 57888788886653222111 10 12222221000000
Q ss_pred ----cCHHHHHHHHhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH
Q 023599 174 ----LDFQGMLQDLGAA-PSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM 247 (280)
Q Consensus 174 ----~d~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 247 (280)
...+.+++.+... .++...|++..-+.--|.. .+++-++++.++|++||+++|.||++..|.--. ..+...
T Consensus 198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG--~~f~~~- 274 (460)
T PRK06105 198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG--NMFGCE- 274 (460)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCc--hhhhHH-
Confidence 0135677776432 3344566665445445655 578889999999999999999999997773311 111111
Q ss_pred hhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 248 FVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 248 ~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
..+..+++ -.++|.++ .| +-+|.++..
T Consensus 275 ~~~v~PDi---~~~gK~lg-gG~~P~~av~~~ 302 (460)
T PRK06105 275 TFGIKPDI---LVMSKQLS-SSYQPLSAVLMN 302 (460)
T ss_pred hcCCCCCe---eeeecccc-cCcccceEEEEc
Confidence 12222343 47799997 56 478877764
No 347
>PRK06917 hypothetical protein; Provisional
Probab=98.28 E-value=0.00015 Score=67.10 Aligned_cols=223 Identities=11% Similarity=-0.015 Sum_probs=114.3
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...||+..|.....-|+ -.+..+++..+++. .. .+.+..... .+.+..+++.+...-. ...+.+.+ +++
T Consensus 29 dG~~ylD~~~g~~~~~lGh-~hp~v~~Ai~~ql~--~~-~~~~~~~~~-~~~~~~lae~L~~~~p--~~~~~v~f--~~s 99 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGH-GVKEIADAIKEQAE--EV-SFVYRSQFT-SEPAEKLAKKLSDLSP--GDLNWSFF--VNS 99 (447)
T ss_pred CCCEEEECchhHHhccCCC-CCHHHHHHHHHHHh--hC-cCccccccC-CHHHHHHHHHHHHhCC--CCCCEEEE--eCC
Confidence 4567899877743111222 12333344444443 11 111111111 1233444444433211 11245666 999
Q ss_pred chhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHHHHH-cCC------------eeeEEEeecCCCC--C-----
Q 023599 120 GSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNFFAA-AGL------------AMKTYHYYDPKTN--G----- 173 (280)
Q Consensus 120 ~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~~~~-~G~------------~~~~v~~~~~~~~--~----- 173 (280)
|++|.+.+.++.... .+| .+|+...-+|.+....... .|. .+..++....... .
T Consensus 100 GsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 179 (447)
T PRK06917 100 GSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPT 179 (447)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHH
Confidence 999999995443221 133 5788888888775433222 111 1111221000000 0
Q ss_pred ---cCHHHHHHHHhcCC-CCcEEEEecCCC-CCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH
Q 023599 174 ---LDFQGMLQDLGAAP-SGAIVLLQASGH-NPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM 247 (280)
Q Consensus 174 ---~d~~~l~~~~~~~~-~~~~~v~~~~p~-NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 247 (280)
-+.+.+++.+.... ++...|++..-. |--|. ..+.+-+++|.++|++||+++|.||+...|.--. .... ..
T Consensus 180 ~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG--~~~a-~~ 256 (447)
T PRK06917 180 CQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG--AMFA-ME 256 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc--chhh-HH
Confidence 12456777776432 234455554323 22333 4578889999999999999999999998763211 1111 11
Q ss_pred hhhcCCeEEEEeccccccccccc-ccceEEEE
Q 023599 248 FVADGGECLVAQSYSKTMGLYGE-RVGALSVV 278 (280)
Q Consensus 248 ~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~~ 278 (280)
..+..++++ +|+|.++ .|+ -+|.+++.
T Consensus 257 ~~gv~PDi~---~~gK~l~-~G~~Pi~a~~~~ 284 (447)
T PRK06917 257 HWGVEPDIM---TLGKGLG-AGYTPIAATVVS 284 (447)
T ss_pred hcCCCCCEE---Eeeehhc-cCCcceEEEEEc
Confidence 123233543 6699997 675 77877654
No 348
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.27 E-value=4.9e-05 Score=72.32 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=73.0
Q ss_pred EEEEeCCCCCChHHHHHHcCC---eeeEEEeecCCCCCcCHHHHHHHHhcC---CCCcEEEEecCCCCCCCCCCCHHHHH
Q 023599 139 TVYLSQPTYGNHPNFFAAAGL---AMKTYHYYDPKTNGLDFQGMLQDLGAA---PSGAIVLLQASGHNPTGIDPTAQQWE 212 (280)
Q Consensus 139 ~Vli~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~v~~~~p~NPTG~~~~~~~l~ 212 (280)
+|+++.-.+..+...+..+|+ .++.||. ++++.+|++.|++.+.+. ...+.+|+-+-.+..+|.+=+.+++.
T Consensus 224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vpv--D~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~ 301 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPV--DSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIV 301 (608)
T ss_pred EEEECCCccHHHHHHHHHcCCCcccEEEeec--CCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHH
Confidence 577777767777888888888 5889998 346789999999998642 23345677777888999877777666
Q ss_pred HHHHHHHhCCc--eeEEcccCCCcc
Q 023599 213 QIRQLMRLKRL--LPFFDCAYQGFV 235 (280)
Q Consensus 213 ~i~~~~~~~~~--~ii~De~y~~~~ 235 (280)
+|++-++++|+ |+.+|.+|+.+.
T Consensus 302 ~l~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 302 ALRNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred HHHHHHHHcCCceeEeeeccccchh
Confidence 66666688897 699999999863
No 349
>PRK07036 hypothetical protein; Provisional
Probab=98.26 E-value=0.00022 Score=66.36 Aligned_cols=161 Identities=14% Similarity=0.177 Sum_probs=91.9
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh----c-CC-CEEEEeCCCCCChHHHHHHc-CC------------eeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH----Y-YQ-HTVYLSQPTYGNHPNFFAAA-GL------------AMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~----~-~G-d~Vli~~P~y~~~~~~~~~~-G~------------~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+.++.... . +| .+|+...-+|.+........ |- .+..++..+..
T Consensus 113 ~~v~f--~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~ 190 (466)
T PRK07036 113 NHVFL--TTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPY 190 (466)
T ss_pred CEEEE--eCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccc
Confidence 56777 999999999995543222 1 23 57888888887754332221 10 12223221100
Q ss_pred --CCCcC--------HHHHHHHHhc-CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCc
Q 023599 171 --TNGLD--------FQGMLQDLGA-APSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM 238 (280)
Q Consensus 171 --~~~~d--------~~~l~~~~~~-~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~ 238 (280)
..+.. .+.+++.+.. .+.+...|++.....-.|.. .+++-++++.++|++||+++|.||+...|.--.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG 270 (466)
T PRK07036 191 RRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG 270 (466)
T ss_pred ccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc
Confidence 01111 2345555543 23444566655544445654 567888999999999999999999997773211
Q ss_pred CCChhHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 239 DADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
.........+..++++ .++|.++ .| +-+|.+++.
T Consensus 271 --~~~~~~~~~gv~PDiv---t~gK~l~-gG~~Pi~av~~~ 305 (466)
T PRK07036 271 --HFFASEAVFGIQPDII---TFAKGLT-SGYQPLGAVIIS 305 (466)
T ss_pred --hhhhhhhhcCCCCCEE---EEccccc-cCccccEEEEEc
Confidence 1111111112233444 5699997 67 478877764
No 350
>PRK06149 hypothetical protein; Provisional
Probab=98.24 E-value=0.00013 Score=73.84 Aligned_cols=161 Identities=15% Similarity=0.054 Sum_probs=90.2
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHc-C-----C--------eeeEEEeecCC--CCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAA-G-----L--------AMKTYHYYDPK--TNG 173 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~-G-----~--------~~~~v~~~~~~--~~~ 173 (280)
+.+.+ +++|++|.+.+.++........+|+..+-+|.+........ + . .+..++..+.. .+.
T Consensus 642 ~~v~f--~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~ 719 (972)
T PRK06149 642 DTVFL--VNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFR 719 (972)
T ss_pred CEEEE--eCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCC
Confidence 56777 99999999999544333333367888888887543221100 0 0 01222220000 011
Q ss_pred -cC-----HHHHHHHHh---cCCCCcEEEEecC-CCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChh
Q 023599 174 -LD-----FQGMLQDLG---AAPSGAIVLLQAS-GHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 174 -~d-----~~~l~~~~~---~~~~~~~~v~~~~-p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 243 (280)
.+ .+.+++.++ +...+.++|++.. ..+--....+++-++++.++|++||+++|.||+...|.--. +..+
T Consensus 720 ~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG-~~~~ 798 (972)
T PRK06149 720 GADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG-HYFW 798 (972)
T ss_pred CcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC-ccch
Confidence 11 234343332 2223344455443 33433355678889999999999999999999997664321 1111
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
.... .+....++ +++|.+| .|+-+|.+++.
T Consensus 799 a~e~-~gv~PDiv---t~gK~lg-~G~Pl~av~~~ 828 (972)
T PRK06149 799 GFEQ-QGVVPDII---TMAKGMG-NGHPLGAVITR 828 (972)
T ss_pred hhhh-cCCCCCEE---Eeccccc-CCeeeEEEEEc
Confidence 1111 12234555 7799998 78888988764
No 351
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.24 E-value=0.00022 Score=66.88 Aligned_cols=225 Identities=15% Similarity=0.039 Sum_probs=116.5
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...|||..|.....-|+ -.+..++++.+++.+ -.....+ ..+..+....+++.+...... ...+.+.+ +++
T Consensus 87 dG~~ylD~~sg~~~~~lGh-~hp~v~~Av~~ql~~-~~~~~~~--~~~~~~~~~~lae~L~~~~~~-~~~~~v~f--~~S 159 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGG-SEPRLVAAATEQLNK-LPFYHSF--WNRTTKPSLDLAKELLEMFTA-RKMGKVFF--TNS 159 (504)
T ss_pred CCCEEEEcCcCHHhcccCC-CCHHHHHHHHHHHhh-ccceecc--cccCcHHHHHHHHHHHhhcCC-CCCCEEEE--eCC
Confidence 3567899887642122232 233444444444441 1111111 112234445555554332110 11245666 999
Q ss_pred chhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHHHHH-cCCe------------eeEEEeecCCCC----C---
Q 023599 120 GSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNFFAA-AGLA------------MKTYHYYDPKTN----G--- 173 (280)
Q Consensus 120 ~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~~~~-~G~~------------~~~v~~~~~~~~----~--- 173 (280)
|++|.+.+..+.... .+| .+|+..+-+|.+....... .|.. +..++..+...+ .
T Consensus 160 GsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 239 (504)
T PLN02760 160 GSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEE 239 (504)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHH
Confidence 999999994443211 133 5788888888766332211 2211 112221000000 0
Q ss_pred ----cCHHHHHHHHhc-CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHH
Q 023599 174 ----LDFQGMLQDLGA-APSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRM 247 (280)
Q Consensus 174 ----~d~~~l~~~~~~-~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 247 (280)
...+.+++.+.+ .+++.++|++..-..--|.+ .+.+-+++|.++|++||+++|.||++..|.--. .... ..
T Consensus 240 ~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG--~~~a-~e 316 (504)
T PLN02760 240 EFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLG--TMFG-CD 316 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccc--hhhH-HH
Confidence 012456666643 22334556655444444654 467889999999999999999999997773311 1111 11
Q ss_pred hhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 248 FVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 248 ~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
..+..++ |.+|+|.++ .| +-+|.+++.
T Consensus 317 ~~gv~PD---ivtlgK~lg-gG~~PigAv~~~ 344 (504)
T PLN02760 317 KYNIKPD---LVSLAKALS-SAYMPIGAVLVS 344 (504)
T ss_pred hcCCCCc---EEEeccccc-CCccccceEeec
Confidence 1122234 567799997 56 478877654
No 352
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.23 E-value=0.00017 Score=66.68 Aligned_cols=160 Identities=13% Similarity=0.036 Sum_probs=91.3
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh----c-CC-CEEEEeCCCCCChHHHHHHc-C------------CeeeEEEeec-C
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH----Y-YQ-HTVYLSQPTYGNHPNFFAAA-G------------LAMKTYHYYD-P 169 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~----~-~G-d~Vli~~P~y~~~~~~~~~~-G------------~~~~~v~~~~-~ 169 (280)
+.+.+ +++|++|.+.+..+.... . ++ .+|+...-+|.+........ | ..+..+|... .
T Consensus 110 ~~v~f--~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (445)
T PRK09221 110 DHVFF--TNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDL 187 (445)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccc
Confidence 57777 999999999985443322 1 22 57888888887653221111 1 1122233210 0
Q ss_pred C--CCCc--------CHHHHHHHHhcC-CCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 170 K--TNGL--------DFQGMLQDLGAA-PSGAIVLLQASGHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 170 ~--~~~~--------d~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
. .+.. ..+.+++.+... .++..+|++..-..-.|... +.+-+++|.++|++||+++|.||+...|.--
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt 267 (445)
T PRK09221 188 PENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRL 267 (445)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcC
Confidence 0 0110 135677777543 23445666655555556644 5667899999999999999999999766321
Q ss_pred cCCChhHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 238 MDADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
. ....... .+..++ +-+++|.++ .| +-+|.+++.
T Consensus 268 G--~~~~~~~-~gv~PD---i~~~gK~l~-gG~~Pi~av~~~ 302 (445)
T PRK09221 268 G--AAFAAER-FGVTPD---IITFAKGLT-NGAIPMGAVIAS 302 (445)
T ss_pred c--hhhHHHh-cCCCCC---EEEeccccc-cCcccceeeEEc
Confidence 1 1111111 122223 447899997 45 567776553
No 353
>PRK07483 hypothetical protein; Provisional
Probab=98.22 E-value=0.00026 Score=65.39 Aligned_cols=223 Identities=13% Similarity=0.062 Sum_probs=113.5
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...+|+..|.....-|+ -.+..+++..+++. ........ ... .+....+++.+...-. ...+.+.+ +++
T Consensus 28 dG~~ylD~~~g~~~~~lGh-~~p~v~~av~~ql~--~~~~~~~~-~~~-~~~~~~lae~L~~~~p--~~~~~v~f--~~s 98 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGH-SHPRVIAAIHAQID--RLAYAHTS-FFT-TEPAEALADRLVAAAP--AGLEHVYF--VSG 98 (443)
T ss_pred CCCEEEEcCccHhhhccCC-CCHHHHHHHHHHHH--hccCcccc-ccC-CHHHHHHHHHHHHhCC--CCCCEEEE--cCC
Confidence 4567899987743122222 12333344444443 11100100 011 2233445555433211 01257777 999
Q ss_pred chhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHHHHH-cCC------------eeeEEEeecCCCC---Cc---
Q 023599 120 GSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNFFAA-AGL------------AMKTYHYYDPKTN---GL--- 174 (280)
Q Consensus 120 ~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~~~~-~G~------------~~~~v~~~~~~~~---~~--- 174 (280)
|++|.+.+..+.... .+| .+|+...-+|.+....... .|- .+..++....... ..
T Consensus 99 GsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK07483 99 GSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDE 178 (443)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHH
Confidence 999999995544333 134 4688878888665322211 110 1122221000000 00
Q ss_pred -----CHHHHHHHHhc-CCCCcEEEEecCCCC-CCC-CCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHH
Q 023599 175 -----DFQGMLQDLGA-APSGAIVLLQASGHN-PTG-IDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVR 246 (280)
Q Consensus 175 -----d~~~l~~~~~~-~~~~~~~v~~~~p~N-PTG-~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 246 (280)
..+.+++.+.. ...+...|++..-+- --| ...+.+-++++.++|++||+++|.||+...|.--. ..+...
T Consensus 179 ~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG--~~~a~~ 256 (443)
T PRK07483 179 AYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG--TLFACE 256 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc--HHHHHh
Confidence 02566665543 223344555543321 124 35678889999999999999999999998774321 111111
Q ss_pred HhhhcCCeEEEEeccccccccccc-ccceEEEE
Q 023599 247 MFVADGGECLVAQSYSKTMGLYGE-RVGALSVV 278 (280)
Q Consensus 247 ~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~~ 278 (280)
..+..+++++ ++|.++ .|+ -+|.+++.
T Consensus 257 -~~gv~PDiv~---~gK~l~-gG~~Pi~av~~~ 284 (443)
T PRK07483 257 -EDGVAPDLVT---IAKGLG-AGYQPIGAVLAS 284 (443)
T ss_pred -hcCCCCCeee---ehhhhc-cCccccEEEEEc
Confidence 1233345554 499997 685 78877764
No 354
>PRK07481 hypothetical protein; Provisional
Probab=98.22 E-value=0.00028 Score=65.37 Aligned_cols=160 Identities=15% Similarity=0.094 Sum_probs=90.6
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh-----cCC-CEEEEeCCCCCChHHHHHHc-C------------CeeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH-----YYQ-HTVYLSQPTYGNHPNFFAAA-G------------LAMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~-----~~G-d~Vli~~P~y~~~~~~~~~~-G------------~~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+.++.... .+| .+|+...-+|.+........ | ..+..++..+..
T Consensus 105 ~~v~f--~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~ 182 (449)
T PRK07481 105 RRVFF--SSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLY 182 (449)
T ss_pred CEEEE--cCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCccc
Confidence 56777 999999999995543322 134 57888888887753322111 1 012222220000
Q ss_pred --CCC-cCHHHH--------HHHHh-cCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 171 --TNG-LDFQGM--------LQDLG-AAPSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 171 --~~~-~d~~~l--------~~~~~-~~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
.+. .|.+.+ ++.+. ..+++..+|++..-+.-.|.. .+.+-++++.++|++||+++|.||+...|.--
T Consensus 183 ~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRt 262 (449)
T PRK07481 183 RNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRT 262 (449)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcC
Confidence 011 133333 34343 223344566655444444654 56777999999999999999999999877432
Q ss_pred cCCChhHHHHhhhcCCeEEEEecccccccccc-cccceEEEE
Q 023599 238 MDADALPVRMFVADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
. .... ....+..+++++ ++|.++ .| +-+|.+++.
T Consensus 263 G--~~~a-~~~~gv~PDiv~---~gKgl~-gG~~Pi~av~~~ 297 (449)
T PRK07481 263 G--SWFG-SRGWGVKPDIMC---LAKGIT-SGYVPLGATMVN 297 (449)
T ss_pred c--hhhH-hhhcCCCCCEEE---Eeeccc-CCCcCceEEEEc
Confidence 1 1111 112233345554 499987 57 478877664
No 355
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.21 E-value=0.00047 Score=64.01 Aligned_cols=225 Identities=12% Similarity=0.093 Sum_probs=112.8
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
.+...||+..|.....-|+ -.++.+++..+++. ........ .-..+.+..+++.+...-........+.+ .+++
T Consensus 56 dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~q~~--~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f-~~~S 129 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGH-NHPDVLQSIQDVLT--SGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQF-TGPS 129 (459)
T ss_pred CCCEEEEcccchhhccCCC-CCHHHHHHHHHHHh--hhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEE-eCCC
Confidence 4567899987753121232 12334444444443 21111110 01123444555554332110000012322 2689
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHc-C------------CeeeEEEeecCCC--CC----cCHHHH-
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAA-G------------LAMKTYHYYDPKT--NG----LDFQGM- 179 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~-G------------~~~~~v~~~~~~~--~~----~d~~~l- 179 (280)
|++|.+.+.++.......++|+...-+|.+........ | ..+..+|..+... +. -+.+.+
T Consensus 130 GsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK06931 130 GADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALT 209 (459)
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHH
Confidence 99999999554433333467888888887765443321 1 1122333211000 00 122322
Q ss_pred ---HHHHhc---CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcC
Q 023599 180 ---LQDLGA---APSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADG 252 (280)
Q Consensus 180 ---~~~~~~---~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 252 (280)
++.+.+ ...+...+++..-.--.|.. .+.+-++++.++|++||+++|.||+...|.--. ..+... ..+..
T Consensus 210 ~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG--~~~a~~-~~gv~ 286 (459)
T PRK06931 210 YYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG--KMFAFE-HAGIE 286 (459)
T ss_pred HHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc--hHHHhh-hcCCC
Confidence 333321 12234455554333333543 578889999999999999999999998874321 111111 12333
Q ss_pred CeEEEEecccccccccccccceEEE
Q 023599 253 GECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 253 ~~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
++++ .++|.++ .|+-+|.++.
T Consensus 287 PDiv---t~gK~l~-gG~Pi~av~~ 307 (459)
T PRK06931 287 PDII---VMSKAVG-GGLPLAVLGI 307 (459)
T ss_pred CCEE---Eeccccc-CCcceeeeee
Confidence 4555 4499998 6888886543
No 356
>PRK07480 putative aminotransferase; Validated
Probab=98.14 E-value=0.00026 Score=65.70 Aligned_cols=158 Identities=16% Similarity=0.146 Sum_probs=89.5
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh----c-CC-CEEEEeCCCCCChHHHHHHc-CC------------eeeEEEeecCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH----Y-YQ-HTVYLSQPTYGNHPNFFAAA-GL------------AMKTYHYYDPK 170 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~----~-~G-d~Vli~~P~y~~~~~~~~~~-G~------------~~~~v~~~~~~ 170 (280)
+.+.+ +++|++|.+.+..+.... . +| .+|+...-+|.+........ |. .+..++. +.
T Consensus 112 ~~v~f--~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~--p~ 187 (456)
T PRK07480 112 NHVFF--TNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQ--PY 187 (456)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCC--Cc
Confidence 57777 999999999995443322 1 33 46887777886643211111 11 0111221 00
Q ss_pred CC----CcC--------HHHHHHHHhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 171 TN----GLD--------FQGMLQDLGAA-PSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 171 ~~----~~d--------~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
.+ ..+ .+.+++.+.+. ..+...|++...+.--|.. .+.+-+++|.++|++||+++|.||++..|.-
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGR 267 (456)
T PRK07480 188 WFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGR 267 (456)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence 00 001 25565555432 3344566665544445664 4566699999999999999999999987733
Q ss_pred CcCCChhHHHHhhhcCCeEEEEeccccccccccc-ccceEEEE
Q 023599 237 NMDADALPVRMFVADGGECLVAQSYSKTMGLYGE-RVGALSVV 278 (280)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~v~~ 278 (280)
-. ...... ..+..++++ .|+|.++ .|+ -+|.+++.
T Consensus 268 tG--~~~a~~-~~gv~PDiv---~~gK~l~-gG~~Pi~av~~~ 303 (456)
T PRK07480 268 TG--EWFGSQ-HFGIKPDLM---TIAKGLT-SGYIPMGAVGVG 303 (456)
T ss_pred Cc--chhhhh-hcCCCCCee---eeehhhc-cCCccceEEEEc
Confidence 11 111111 123233444 5699987 574 78877764
No 357
>PRK06148 hypothetical protein; Provisional
Probab=98.09 E-value=0.00045 Score=70.13 Aligned_cols=161 Identities=14% Similarity=0.096 Sum_probs=90.5
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHH-c--------C----CeeeEEEeecC--CCCCc
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAA-A--------G----LAMKTYHYYDP--KTNGL 174 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~-~--------G----~~~~~v~~~~~--~~~~~ 174 (280)
+.+.+ +++|++|.+++.++........+|+...-+|.+....... . + ..+..++..+. ..+..
T Consensus 681 ~~v~f--~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 758 (1013)
T PRK06148 681 TVAFF--VNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERW 758 (1013)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCC
Confidence 55666 9999999999955543333346788888888665322111 1 1 01111111000 00110
Q ss_pred -C-------HHHHHHHHh---cCCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCCh
Q 023599 175 -D-------FQGMLQDLG---AAPSGAIVLLQASGHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADA 242 (280)
Q Consensus 175 -d-------~~~l~~~~~---~~~~~~~~v~~~~p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~ 242 (280)
+ .+.+++.+. ....+.+.|++..-.---|. ..+++-++++.++|+++|+++|.||+...|.--.. ..
T Consensus 759 ~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~-~~ 837 (1013)
T PRK06148 759 PDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGS-HW 837 (1013)
T ss_pred ChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCC-cc
Confidence 1 134555443 22233445555433322343 55788899999999999999999999987743110 01
Q ss_pred hHHHHhhhcCCeEEEEecccccccccccccceEEEE
Q 023599 243 LPVRMFVADGGECLVAQSYSKTMGLYGERVGALSVV 278 (280)
Q Consensus 243 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v~~ 278 (280)
+.... .+..+.+ -+++|.+| .|+-+|.+++.
T Consensus 838 ~a~e~-~gv~PDi---vt~gK~lg-gG~Plgav~~~ 868 (1013)
T PRK06148 838 WAFET-QGVVPDI---VTMGKPIG-NGHPMGAVVTT 868 (1013)
T ss_pred hhhhh-cCCCcce---eeeccccc-CCcceEEEEEc
Confidence 11111 1223344 45699998 78989988764
No 358
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=98.08 E-value=5.4e-05 Score=64.28 Aligned_cols=203 Identities=14% Similarity=0.014 Sum_probs=118.3
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhcc-CCCCCCCCCCCCC----HHHHHHHHHHHhCCCCccccCCCeEEee
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVND-LSADKEYLPITGL----PEFNKLSAKLIFGADSPAIKENRVSTVQ 116 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~G~----~~lr~~ia~~l~~~~~~~~~~~~i~~v~ 116 (280)
..+++|...+| -|+..-++.+.+..+.+..- .+ ..+-.-..|. ..|...||++..+ |+.++
T Consensus 67 k~ilnFcaNnY---LGLsshPeii~a~~~aleeyGaG-lssvrfIcGtq~iHk~LE~kiAqfh~r--------ED~il-- 132 (417)
T KOG1359|consen 67 KKILNFCANNY---LGLSSHPEIINAGQKALEEYGAG-LSSVRFICGTQDIHKLLESKIAQFHGR--------EDTIL-- 132 (417)
T ss_pred cceeeeccccc---ccccCChHHHHHHHHHHHHhCCC-ccceeEEecchHHHHHHHHHHHHHhCC--------CceEE--
Confidence 56889988777 55555555555544444310 11 0110012333 4566777777422 44455
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCC-CcEEEEe
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPS-GAIVLLQ 195 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~-~~~~v~~ 195 (280)
.+.+-.|...+ +-+++.|-|.|+--...+-...+-.+.. . .-..+|+-.++..+.++.+ +.++|+.
T Consensus 133 ypscfdANag~--feail~pedAvfSDeLNhASIIdGirLc-----k------ry~h~dv~~l~~~l~~a~k~r~klv~T 199 (417)
T KOG1359|consen 133 YPSCFDANAGA--FEAILTPEDAVFSDELNHASIIDGIRLC-----K------RYRHVDVFDLEHCLISACKMRLKLVVT 199 (417)
T ss_pred eccccccchHH--HHHhcChhhhhhccccccchhhhhhHHH-----h------hhccchhHHHHHHHHHhhhheEEEEEe
Confidence 77777777777 6777778777776554443332222211 1 1113567777776665432 2235554
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhh-cCCeEEEEecccccccccccccce
Q 023599 196 ASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVA-DGGECLVAQSYSKTMGLYGERVGA 274 (280)
Q Consensus 196 ~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RvG~ 274 (280)
..--.=-|.+.+ +++|++++++||.++++||++..+.+.... .- ...... +++-.|..++++|.+| |---||
T Consensus 200 Dg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tG-rG-t~E~~~vm~~vdiinsTLgKAlG--ga~GGy 272 (417)
T KOG1359|consen 200 DGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETG-RG-TAEEFGVMGDVDIINSTLGKALG--GASGGY 272 (417)
T ss_pred cceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCC-CC-hHHHhCCCCcceehhhhhhhhhc--CCCCCC
Confidence 444455666665 566789999999999999999999884211 10 112212 3455677899999987 666777
Q ss_pred EEEE
Q 023599 275 LSVV 278 (280)
Q Consensus 275 ~v~~ 278 (280)
..++
T Consensus 273 ttgp 276 (417)
T KOG1359|consen 273 TTGP 276 (417)
T ss_pred ccCC
Confidence 7665
No 359
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.00 E-value=0.00079 Score=59.78 Aligned_cols=221 Identities=13% Similarity=0.085 Sum_probs=124.1
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCC--CHHHHHHHHHHHhCCCCccccCCCeEEeec
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITG--LPEFNKLSAKLIFGADSPAIKENRVSTVQC 117 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G--~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t 117 (280)
.+.+.||+..+......++. .++..+++.+... . ..+...+..- .-++.+.+.+.+. +. ..+.|.+ +
T Consensus 54 ~g~EyiD~~ssw~~~~~Gha-npev~ral~~q~~--k-~~hs~~~~~t~eav~l~~~l~~~~~-~~----~~~rvff--~ 122 (433)
T KOG1401|consen 54 DGKEYIDFTSSWAVTILGHA-NPEVARALAEQAK--K-LGHSSNGYFTLEAVELEEVLSAVLG-KG----SAERVFF--C 122 (433)
T ss_pred CcceeeeeccceeccccCCC-CHHHHHHHHHHHh--h-heeccCccccHHHHHHHHHHHhccc-CC----CccEEEE--e
Confidence 45678999888643333433 3344444444433 1 1122222222 2234444444431 11 3588888 9
Q ss_pred ccchhHHHHHHHHHHhhc-CC---C--EEEEeCCCCCCh-HHHHHHcCCeeeEEEee--cCC--C-CCcCHHHHHHHHhc
Q 023599 118 LSGSGSLRIGADFLAKHY-YQ---H--TVYLSQPTYGNH-PNFFAAAGLAMKTYHYY--DPK--T-NGLDFQGMLQDLGA 185 (280)
Q Consensus 118 ~g~~~al~~~~~~~~~~~-~G---d--~Vli~~P~y~~~-~~~~~~~G~~~~~v~~~--~~~--~-~~~d~~~l~~~~~~ 185 (280)
++|++|.+.+..+..... .+ + +|+...-+|.+- ...+...+......|.. -++ + ..-|..++++.++.
T Consensus 123 nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~ 202 (433)
T KOG1401|consen 123 NSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFES 202 (433)
T ss_pred cCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHh
Confidence 999999999943332211 11 1 366666777543 33333222222222110 011 0 12368999999998
Q ss_pred CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 186 APSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 186 ~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
+.....+|++.--+=--|.. ..++.+..|.+.|+++++++|.||+...|.--. .-+. ..+....++ |.++.|.
T Consensus 203 h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g--~~~a-~e~~~~~PD---I~t~aK~ 276 (433)
T KOG1401|consen 203 HKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG--YGWA-QEYFGVTPD---ITTVAKP 276 (433)
T ss_pred CCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc--hHHH-HHHhCcCCc---ceeehhh
Confidence 86555667765544333433 457788999999999999999999998875421 1111 222223233 4567899
Q ss_pred ccccccccceEEEE
Q 023599 265 MGLYGERVGALSVV 278 (280)
Q Consensus 265 ~~~~G~RvG~~v~~ 278 (280)
++ -|+-+|..++.
T Consensus 277 L~-gGlPigA~~v~ 289 (433)
T KOG1401|consen 277 LG-GGLPIGATGVR 289 (433)
T ss_pred cc-CCceeEEEeeh
Confidence 98 78999977664
No 360
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.99 E-value=0.00081 Score=61.99 Aligned_cols=125 Identities=9% Similarity=0.062 Sum_probs=76.8
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhc------C------CCEEEEeCCCCCChHHHHHH-cCCe-e--eEEEe-------
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHY------Y------QHTVYLSQPTYGNHPNFFAA-AGLA-M--KTYHY------- 166 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~------~------Gd~Vli~~P~y~~~~~~~~~-~G~~-~--~~v~~------- 166 (280)
+.+.+ +++|++|++.+..+..... . +.+|+...-+|.+....... .|.. . ...+.
T Consensus 104 ~~v~f--~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~ 181 (431)
T TIGR03251 104 PHLFF--IEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRID 181 (431)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCC
Confidence 56777 9999999999955443221 1 36788888888765433322 2211 0 00010
Q ss_pred ---e----cCCCCC-------cCHHHHHHHHhcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccC
Q 023599 167 ---Y----DPKTNG-------LDFQGMLQDLGAAPSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAY 231 (280)
Q Consensus 167 ---~----~~~~~~-------~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y 231 (280)
. +.+... -+++.+++.+.....+...+++.....-.|.. .+++-+++|.++|++||+++|.||++
T Consensus 182 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 182 NPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred CCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 0 000000 12455566665444455666666555555654 57889999999999999999999999
Q ss_pred CCccc
Q 023599 232 QGFVM 236 (280)
Q Consensus 232 ~~~~~ 236 (280)
..|..
T Consensus 262 tG~Gr 266 (431)
T TIGR03251 262 TGVGL 266 (431)
T ss_pred hccCc
Confidence 87754
No 361
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.93 E-value=0.0013 Score=60.89 Aligned_cols=149 Identities=8% Similarity=0.035 Sum_probs=85.5
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh--------c---CC-CEEEEeCCCCCChHHHHHH-cCCee-----------eEEE
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH--------Y---YQ-HTVYLSQPTYGNHPNFFAA-AGLAM-----------KTYH 165 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~--------~---~G-d~Vli~~P~y~~~~~~~~~-~G~~~-----------~~v~ 165 (280)
+.+.+ +++|++|.+.+..+.... . +| .+|+...-+|.+....... .|... ..++
T Consensus 111 ~~v~f--~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~ 188 (443)
T PRK08297 111 PHLFF--VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRID 188 (443)
T ss_pred CEEEE--eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccC
Confidence 67777 999999999995544221 1 12 5788888888776433332 22110 0011
Q ss_pred eec------CCC-C------CcCHHHHHHHHhcCCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccC
Q 023599 166 YYD------PKT-N------GLDFQGMLQDLGAAPSGAIVLLQASGHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAY 231 (280)
Q Consensus 166 ~~~------~~~-~------~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y 231 (280)
... ..+ . .-+++.+++.+.+.+.+...+++..-.---|. ..+++-+++|.++|++||+++|.||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~ 268 (443)
T PRK08297 189 NPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQ 268 (443)
T ss_pred CCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 000 000 0 01245566777655445556665543333344 377899999999999999999999999
Q ss_pred CCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 232 QGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
..|.... ..+. ....+..+.++ .|+|.++
T Consensus 269 tGfGRtG--~~~a-~~~~gv~PDiv---~~gK~l~ 297 (443)
T PRK08297 269 TGVGLTG--TAWA-YQQLGVRPDIV---AFGKKTQ 297 (443)
T ss_pred hccCccc--hHHH-HHhcCCCCCEE---Eeccccc
Confidence 8874421 1111 11123234555 3688775
No 362
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.93 E-value=0.00041 Score=69.51 Aligned_cols=150 Identities=11% Similarity=0.059 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh-hcC--CCEEEEeCCCCCChHHHH----HHcCCee
Q 023599 89 PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK-HYY--QHTVYLSQPTYGNHPNFF----AAAGLAM 161 (280)
Q Consensus 89 ~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~--Gd~Vli~~P~y~~~~~~~----~~~G~~~ 161 (280)
.++++.++++. +. ...|+.+ ..+++.+.+.+ +.++ ..+ +++|++++-.|+.+..++ +..|+++
T Consensus 124 ~~~Qt~la~Lt-G~-----~~anaSl--~d~aTAa~ea~--~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev 193 (954)
T PRK05367 124 LNFQTMVADLT-GL-----EIANASL--LDEATAAAEAM--ALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEV 193 (954)
T ss_pred HHHHHHHHHHH-CC-----Chhhccc--cccHHHHHHHH--HHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEE
Confidence 34667777764 33 2477787 99999999988 4443 344 489999999998877665 4579999
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCC
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDAD 241 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 241 (280)
+.++. +. |.+ . .+...+++.+| |-+|.+.+ +++|+++|+++|+++++|.....+..-
T Consensus 194 ~~~~~-~~-----d~~-------~--~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~l---- 250 (954)
T PRK05367 194 VVGDA-AK-----ALD-------H--DDVFGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTLL---- 250 (954)
T ss_pred EEecC-cc-----CCC-------c--ccEEEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccCC----
Confidence 99987 22 111 1 12234444444 78998874 778899999999999998643222221
Q ss_pred hhHHHHhhhcCCeEEEEeccccc-----ccccccccceEEEE
Q 023599 242 ALPVRMFVADGGECLVAQSYSKT-----MGLYGERVGALSVV 278 (280)
Q Consensus 242 ~~~~~~~~~~~~~~i~~~S~SK~-----~~~~G~RvG~~v~~ 278 (280)
....+.+..++ ++|.-|. ||-|| .|++.+.
T Consensus 251 ----~~pge~GaDi~-vgs~qkfg~P~g~GGP~--aGflavr 285 (954)
T PRK05367 251 ----TPPGEMGADIA-VGSAQRFGVPMGFGGPH--AAYFAVR 285 (954)
T ss_pred ----CChhhcCCCEE-EeeCcccCCCCCCCCCC--EEEEEEC
Confidence 01122333444 4555565 65554 7777764
No 363
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=97.91 E-value=9.5e-05 Score=66.53 Aligned_cols=145 Identities=10% Similarity=-0.044 Sum_probs=89.8
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeec-ccchhHHHHHHHHHHhhcCCCEEEEeCCCCC-ChHHHHHH--cCCeeeE
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQC-LSGSGSLRIGADFLAKHYYQHTVYLSQPTYG-NHPNFFAA--AGLAMKT 163 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t-~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~-~~~~~~~~--~G~~~~~ 163 (280)
..+.|+.+++++.... +++|++ + .+||.+++++ +.+++.+ +.+.+..-.|. .+...+.. .+.++..
T Consensus 43 ~~~~r~~l~~l~~~~~-----~~~v~f--~~gs~T~a~~~~--~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~ 112 (361)
T TIGR01366 43 VGRVREGLAELFSLPD-----GYEVIL--GNGGATAFWDAA--TFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPII 112 (361)
T ss_pred HHHHHHHHHHHhCCCC-----CceEEE--ECCchhHHHHHH--HHhcccc-cccEEecCHHHHHHHHHHHhhhccCCceE
Confidence 4567888888864321 246665 5 5599999999 7776543 33344333342 23334443 2336677
Q ss_pred EEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChh
Q 023599 164 YHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADAL 243 (280)
Q Consensus 164 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~ 243 (280)
++. +++..++. .+.++++ +|++++..|.||...+.+++ ++++|+++|+|.+-.-....- +.
T Consensus 113 ~~~--~~~~~~~~-----~~~~~~~---lV~~~h~et~tG~~~pi~~I------~~~~g~~~iVDavqs~g~~~i--dv- 173 (361)
T TIGR01366 113 VTA--DPGSAPEP-----QADPGVD---VIAWAHNETSTGVAVPVRRP------EGSDDALVVIDATSGAGGLPV--DI- 173 (361)
T ss_pred Eec--CCCCCCCC-----ccCCCCC---EEEEcccCCccceecccccc------cccCCCeEEEEcCccccCCCC--CH-
Confidence 765 22223332 2333334 88889999999999986654 478999999999876554432 11
Q ss_pred HHHHhhhcCCeEEEEecccccccccc
Q 023599 244 PVRMFVADGGECLVAQSYSKTMGLYG 269 (280)
Q Consensus 244 ~~~~~~~~~~~~i~~~S~SK~~~~~G 269 (280)
.. .+ +++.|--|.+|.+|
T Consensus 174 --~~-----~D-~~~~s~~K~lg~~~ 191 (361)
T TIGR01366 174 --AE-----TD-VYYFAPQKNFASDG 191 (361)
T ss_pred --HH-----CC-EEEEEchhhcCCCC
Confidence 11 13 36789999998774
No 364
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.89 E-value=0.00017 Score=64.86 Aligned_cols=141 Identities=11% Similarity=0.109 Sum_probs=99.0
Q ss_pred CCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHH-HHHhhc--CC---CEEEEeCCCCCChHHHHHHcCC
Q 023599 86 TGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGAD-FLAKHY--YQ---HTVYLSQPTYGNHPNFFAAAGL 159 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~-~~~~~~--~G---d~Vli~~P~y~~~~~~~~~~G~ 159 (280)
++...+..+...++......+ ++.+- ..|.|+++++.++-. ...... .| ..++++.-....+....+..+.
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~--~~~~g-~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v 192 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP--SDSCG-CGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEV 192 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC--ccccC-ccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEE
Confidence 455566666655533222221 23332 349999999554411 111111 23 3455555555666777777889
Q ss_pred eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh-CCceeEEcccCCCccc
Q 023599 160 AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRL-KRLLPFFDCAYQGFVM 236 (280)
Q Consensus 160 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~-~~~~ii~De~y~~~~~ 236 (280)
++..+++ ++.++.+|+..+.+.+.+++. .++..-|+-|+|. .+++++|.+++.+ +++.+-+|.+-+.|+-
T Consensus 193 ~l~~V~~-~~~~~~~D~~k~~~~i~eNti---~lv~~~~~~p~G~---~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~ 263 (491)
T KOG1383|consen 193 ELREVPL-DEGDYRVDPGKVVRMIDENTI---MLVGSLPNFPTGE---IEDVEKLADLLLEIWDIPIHVDACLGGFIN 263 (491)
T ss_pred EEEeeec-cccceEecHHHHHHHhccceE---EEEEEcCCCCccc---hhhHHHHHHHHHHHhCCceeecccCccccc
Confidence 9999999 678899999999999998765 7888889999995 5778889999988 9999999999988875
No 365
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.66 E-value=0.003 Score=58.67 Aligned_cols=125 Identities=8% Similarity=-0.012 Sum_probs=77.8
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh-c-----------------------CC---CEEEEeCCCCCChHHHHHH-cCC--
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH-Y-----------------------YQ---HTVYLSQPTYGNHPNFFAA-AGL-- 159 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~-~-----------------------~G---d~Vli~~P~y~~~~~~~~~-~G~-- 159 (280)
+.+.+ +++|++|.+.+..+.... . +| .+|+...-+|.+....... .|-
T Consensus 123 ~~v~f--~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~ 200 (464)
T TIGR00699 123 DQVWT--GMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKP 200 (464)
T ss_pred CEEEE--eCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcc
Confidence 56777 999999999995544221 0 12 2688888889765433222 121
Q ss_pred ---------eeeEEEeecCC-CC-----------CcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHH
Q 023599 160 ---------AMKTYHYYDPK-TN-----------GLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDP-TAQQWEQIRQL 217 (280)
Q Consensus 160 ---------~~~~v~~~~~~-~~-----------~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~-~~~~l~~i~~~ 217 (280)
.+..+|..+.. .+ .-+++.+++.+.+...+...|++..-..-.|... +.+-+++|.++
T Consensus 201 ~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~l 280 (464)
T TIGR00699 201 IHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI 280 (464)
T ss_pred ccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence 11112210000 00 0135667777765434455666665555567666 68889999999
Q ss_pred HHhCCceeEEcccCCCccc
Q 023599 218 MRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 218 ~~~~~~~ii~De~y~~~~~ 236 (280)
|++||+++|.||+...|..
T Consensus 281 c~~~g~lLI~DEV~tGfGr 299 (464)
T TIGR00699 281 TKKHNVAFIVDEVQTGVGA 299 (464)
T ss_pred HHHcCCEEEEeeeeeCCCC
Confidence 9999999999999977743
No 366
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.64 E-value=2.9e-05 Score=68.45 Aligned_cols=152 Identities=16% Similarity=0.157 Sum_probs=33.0
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCC---C---CChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHH
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPT---Y---GNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDL 183 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~---y---~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~ 183 (280)
+..++ +++...|+.++ +- .+.+|.+|+++.-. + +...++++..|+++++|-.. .....+++++++
T Consensus 63 eaA~V--vNnnaAAv~L~--l~-~la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI 133 (367)
T PF03841_consen 63 EAALV--VNNNAAAVLLA--LN-TLAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAI 133 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccc--ccccccccccc--cc-ccccccccccccccccccccccccccccccccccccccccc----cccccccccccc
Confidence 55555 77777777776 33 34577788877532 2 23567778889999999863 245688889999
Q ss_pred hcCCCCcEEEEecCCCCCC--CCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC---cCCChhHHHHhhhcCCeEEEE
Q 023599 184 GAAPSGAIVLLQASGHNPT--GIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN---MDADALPVRMFVADGGECLVA 258 (280)
Q Consensus 184 ~~~~~~~~~v~~~~p~NPT--G~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~---~~~~~~~~~~~~~~~~~~i~~ 258 (280)
.+++. +++--+++|-. |..-.. .++++++++++|++++++|-.-+.+..- .-...+.++.+...+..+ ++
T Consensus 134 ~e~Ta---~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDl-V~ 208 (367)
T PF03841_consen 134 TENTA---ALLKVHTSNFRIQGFTGEV-SLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADL-VT 208 (367)
T ss_dssp -------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SE-EE
T ss_pred ccccc---ccccccccccccccccccc-cHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCE-EE
Confidence 88865 55555566663 322222 4788899999999999999976443320 001122334444444444 47
Q ss_pred ecccccccccccccceEEE
Q 023599 259 QSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 259 ~S~SK~~~~~G~RvG~~v~ 277 (280)
.|=-|.+| |=..|.++.
T Consensus 209 fSGdKlLG--GPQaGiI~G 225 (367)
T PF03841_consen 209 FSGDKLLG--GPQAGIIVG 225 (367)
T ss_dssp EETTSSSS--S-S-EEEEE
T ss_pred EECCCcCC--CCCeEEEEe
Confidence 88899997 456787764
No 367
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.60 E-value=0.0019 Score=56.56 Aligned_cols=141 Identities=9% Similarity=0.097 Sum_probs=99.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhc-----CCCEEEEeC-CCCCChHH
Q 023599 79 DKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHY-----YQHTVYLSQ-PTYGNHPN 152 (280)
Q Consensus 79 ~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~-----~Gd~Vli~~-P~y~~~~~ 152 (280)
...|..+++...|++++.+.+ +. +.++. |+-|.+|-+++ +-.+++ ||.+..+++ ..|.....
T Consensus 72 DEAYagsrs~~~L~~avkdif-Gf-------q~~iP--thQGRgAE~Il--~~i~ik~~~~~pg~~~~~~sN~~FdTTr~ 139 (471)
T COG3033 72 DEAYAGSRSYYALADAVKDIF-GF-------QYTIP--THQGRGAENIL--IPILIKKGEQEPGSKMVAFSNYHFDTTRG 139 (471)
T ss_pred chhhcccccHHHHHHHHHHhc-Cc-------eeeee--ccCCccHHHHH--HHHHhhhccccCCccccccccceecchhH
Confidence 346999999999999999986 22 44455 88888887777 443343 454444444 44455666
Q ss_pred HHHHcCCeeeEEEeecC---C-----CCCcCHHHHHHHHhcCC--CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCC
Q 023599 153 FFAAAGLAMKTYHYYDP---K-----TNGLDFQGMLQDLGAAP--SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKR 222 (280)
Q Consensus 153 ~~~~~G~~~~~v~~~~~---~-----~~~~d~~~l~~~~~~~~--~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~ 222 (280)
..+..|+.++-++.... + .+.+|++.|++.+.+-. +.+.+++....|.--|+-.|.+.++++.++|++|+
T Consensus 140 h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ 219 (471)
T COG3033 140 HIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYD 219 (471)
T ss_pred HHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcC
Confidence 77788988877765211 1 24678999999998752 22334444445667889999999999999999999
Q ss_pred ceeEEcccC
Q 023599 223 LLPFFDCAY 231 (280)
Q Consensus 223 ~~ii~De~y 231 (280)
+.++.|.+-
T Consensus 220 ipvv~Da~R 228 (471)
T COG3033 220 IPVVMDAAR 228 (471)
T ss_pred CcEEeehhh
Confidence 999999864
No 368
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=97.58 E-value=0.0019 Score=57.31 Aligned_cols=161 Identities=12% Similarity=0.008 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY 167 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~ 167 (280)
..+|.+.+|+.... +..++ .++.--|.+.....++..-||.+|+--.-..-....-.+..++. +.+--
T Consensus 218 hv~LE~eLA~LHqK--------~aALl--FsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~-K~IFr- 285 (570)
T KOG1360|consen 218 HVRLEAELADLHQK--------EAALL--FSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVP-KHIFR- 285 (570)
T ss_pred hhhHHHHHHHHhcC--------cceee--eeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCc-ceeec-
Confidence 45688888887432 22233 44444455555223344558877765443222222222333322 22221
Q ss_pred cCCCCCcCHHHHHHHHhcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHH
Q 023599 168 DPKTNGLDFQGMLQDLGAA-PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVR 246 (280)
Q Consensus 168 ~~~~~~~d~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 246 (280)
. -|++.|++++++. +..+++|-..+-+.=+|.+-+. ++|++++++||.+.+.||++.--.|.+...
T Consensus 286 -H----ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcpl---eelcDvah~yGAiTFlDEVHAVGlYG~rGa----- 352 (570)
T KOG1360|consen 286 -H----NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPL---EELCDVAHKYGAITFLDEVHAVGLYGPRGA----- 352 (570)
T ss_pred -c----CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCH---HHHHHHHHHhCceeeeehhhhhccccCCCC-----
Confidence 1 3899999999865 3345688888889999988775 566999999999999999997766643210
Q ss_pred Hhhhc----CCeEEEEecccccccccccccceEE
Q 023599 247 MFVAD----GGECLVAQSYSKTMGLYGERVGALS 276 (280)
Q Consensus 247 ~~~~~----~~~~i~~~S~SK~~~~~G~RvG~~v 276 (280)
...+. ..-=|..+++.|.||+-| ||+.
T Consensus 353 GvgerdGvm~kvDiIsGTLgKafGcVG---GYIA 383 (570)
T KOG1360|consen 353 GVGERDGVMHKVDIISGTLGKAFGCVG---GYIA 383 (570)
T ss_pred CccccCCcchhhhhcccchhhhccccc---ceeh
Confidence 01111 111255899999998643 5553
No 369
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.49 E-value=0.0092 Score=59.06 Aligned_cols=95 Identities=15% Similarity=0.110 Sum_probs=60.5
Q ss_pred HHHHHHHhc-----CCCCcEEEEecC-CCCCCCCCC-CHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhh
Q 023599 177 QGMLQDLGA-----APSGAIVLLQAS-GHNPTGIDP-TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFV 249 (280)
Q Consensus 177 ~~l~~~~~~-----~~~~~~~v~~~~-p~NPTG~~~-~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 249 (280)
+.+++.+.+ ...+...+++.. .+.--|..+ ++.-++++.++|++||+++|.||++..|.--.. ... ....
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~--~fa-~e~~ 643 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGV--ESA-WELL 643 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccc--hhh-HHhc
Confidence 456666653 223445555543 245557665 677889999999999999999999998854211 111 2222
Q ss_pred hcCCeEEEEecccccccccc-cccceEEEE
Q 023599 250 ADGGECLVAQSYSKTMGLYG-ERVGALSVV 278 (280)
Q Consensus 250 ~~~~~~i~~~S~SK~~~~~G-~RvG~~v~~ 278 (280)
+..++++ .++|.++ .| +-+|.+++.
T Consensus 644 gv~PDIi---~~gKgLt-gG~~Plaa~l~~ 669 (817)
T PLN02974 644 GCKPDIA---CYAKLLT-GGLVPLAATLAT 669 (817)
T ss_pred CCCCCEE---eeccccc-CCCCccEEEEEc
Confidence 3333544 5689887 67 478877764
No 370
>PLN02452 phosphoserine transaminase
Probab=97.45 E-value=0.0029 Score=56.99 Aligned_cols=139 Identities=9% Similarity=-0.094 Sum_probs=84.8
Q ss_pred CeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC--hHHHHHHcCCeeeEEEeec-CCCCCcCHHHHHHHHhcCC
Q 023599 111 RVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN--HPNFFAAAGLAMKTYHYYD-PKTNGLDFQGMLQDLGAAP 187 (280)
Q Consensus 111 ~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~--~~~~~~~~G~~~~~v~~~~-~~~~~~d~~~l~~~~~~~~ 187 (280)
++++ ...||+.+++++ ..+++.+|+++++..-++.. +...++.+|...+.....+ .....++++.+ +..
T Consensus 72 ~v~~-l~Gsgt~~~ea~--~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~- 143 (365)
T PLN02452 72 EVLF-LQGGASTQFAAI--PLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELT- 143 (365)
T ss_pred eEEE-EeCccHHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCC-
Confidence 4443 378889999999 88989999998888766533 4556667886433332211 11124566654 222
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccc
Q 023599 188 SGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGL 267 (280)
Q Consensus 188 ~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 267 (280)
++...|.+++....||+.+. ++.++. ++++|+|.+-.-....- .+.+. .+++ .|.-|.+|.
T Consensus 144 ~~~~~v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~Ss~g~~pi--------dv~~~--~v~~-~saqK~lGP 204 (365)
T PLN02452 144 PDAKFVHICANETIHGVEFK--DYPDVG------NVPLVADMSSNFLSKPV--------DVSKY--GVIY-AGAQKNVGP 204 (365)
T ss_pred CCCcEEEECCCCCCCcEecC--cccccC------CCeEEEECCccccCccc--------CHHHc--CEEE-EecccccCC
Confidence 23347777666778887543 233332 37999999875554321 11121 3444 699999998
Q ss_pred cccccceEEEE
Q 023599 268 YGERVGALSVV 278 (280)
Q Consensus 268 ~G~RvG~~v~~ 278 (280)
+| +|.+++.
T Consensus 205 ~G--l~~v~vr 213 (365)
T PLN02452 205 SG--VTIVIIR 213 (365)
T ss_pred CC--eEEEEEc
Confidence 88 5666654
No 371
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=97.40 E-value=0.0065 Score=61.12 Aligned_cols=154 Identities=10% Similarity=0.045 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh-hcCC--CEEEEeCCCCCChHHHHH----HcCCe
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK-HYYQ--HTVYLSQPTYGNHPNFFA----AAGLA 160 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~-~~~G--d~Vli~~P~y~~~~~~~~----~~G~~ 160 (280)
+.++++.+++++ +. ..+|+.+ +.+++.+.+++ +.+. +.+| |+|++++-.|+.+..+++ ..|++
T Consensus 150 l~~~Qt~ia~Lt-G~-----~~anaSL--~d~aTAaaea~--~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~Gie 219 (993)
T PLN02414 150 LLNYQTMITDLT-GL-----PMSNASL--LDEGTAAAEAM--AMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLE 219 (993)
T ss_pred HHHHHHHHHHHh-CC-----ChhhEee--cCChHHHHHHH--HHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCE
Confidence 456777788774 32 3488888 99999999988 4443 3444 789999999998876664 46889
Q ss_pred eeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 161 MKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 161 ~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
++.++. +.. + .. ......+++. -.|-+|.+.+ +++|+++|+++|+++++ .+. .+..-.
T Consensus 220 V~~v~~-~~~----~------~~---~~~v~~vlvq-~P~~~G~v~d---v~~I~~~ah~~GaL~iV-aad-~lal~~-- 277 (993)
T PLN02414 220 VVVADE-KDF----D------YS---SGDVCGVLVQ-YPATDGEVLD---YAEFVKNAHANGVKVVM-ATD-LLALTM-- 277 (993)
T ss_pred EEEecc-hhh----c------cc---cCceEEEEEe-cCCCCeEEcC---HHHHHHHHHHcCCEEEE-EEC-HHHhcC--
Confidence 998887 221 1 01 1112233332 2346998864 67889999999999998 322 111110
Q ss_pred ChhHHHHhhhcCCeEEEEecccccc---cccccccceEEEE
Q 023599 241 DALPVRMFVADGGECLVAQSYSKTM---GLYGERVGALSVV 278 (280)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~S~SK~~---~~~G~RvG~~v~~ 278 (280)
. ....+.+..++ +++--|.. |..|=+.|++.+.
T Consensus 278 -l---~~pge~GADi~-vgsgqKwg~P~G~GGP~aGflavr 313 (993)
T PLN02414 278 -L---KPPGEWGADIV-VGSAQRFGVPMGYGGPHAAFLATS 313 (993)
T ss_pred -C---CCHhhccCcEE-EECCCccccCCCCCCCCeeEEEEC
Confidence 0 11122333444 56655554 1124447887765
No 372
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=97.36 E-value=0.0017 Score=58.56 Aligned_cols=125 Identities=13% Similarity=0.149 Sum_probs=83.7
Q ss_pred ecccchhHHHHHHHHHHhh-cCCCEEEEeCCCCCCh-H-HHHHHcCC-eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcE
Q 023599 116 QCLSGSGSLRIGADFLAKH-YYQHTVYLSQPTYGNH-P-NFFAAAGL-AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAI 191 (280)
Q Consensus 116 ~t~g~~~al~~~~~~~~~~-~~Gd~Vli~~P~y~~~-~-~~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 191 (280)
.+.||+++++++ +.+++ .+|++|++.. .|+.- . .+++.+|+ ++..+.. +.+..+|++.++. . + .
T Consensus 63 l~GsGT~a~Eaa--~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~----~-~-~- 130 (374)
T TIGR01365 63 VPASDTGAVEMA--LWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF----K-N-D- 130 (374)
T ss_pred ECCchHHHHHHH--HHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC----C-C-C-
Confidence 399999999999 88888 4899999875 55432 4 77888999 4777765 5666789888873 1 1 2
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecccccccccc
Q 023599 192 VLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMGLYG 269 (280)
Q Consensus 192 ~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 269 (280)
|++++.-..||+..+.+ +++..+ ++.++|+|.+-.-...+.+ + + .-=+++.|.-|.+++|+
T Consensus 131 -v~~vhnETSTGv~npv~---~i~~~~--~~~lliVDavSs~g~~~l~--------~-d--~iDv~~tgsQK~L~~pp 191 (374)
T TIGR01365 131 -VVFTWNGTTSGVRVPNG---DFIPAD--REGLTICDATSAAFAQDLD--------Y-H--KLDVVTFSWQKVLGGEG 191 (374)
T ss_pred -EEEecCCCchheecccc---cccccc--CCCcEEEEccchhcCCCCC--------h-h--HCcEEEEechhccCCCC
Confidence 33444556788877753 333211 5899999998655543311 1 1 12255888899997753
No 373
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.35 E-value=0.0006 Score=61.22 Aligned_cols=158 Identities=13% Similarity=0.107 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee
Q 023599 88 LPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY 167 (280)
Q Consensus 88 ~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~ 167 (280)
..++.+.+|+|+... +.+++ .. |-+...+. +-.++.+|.-|+--+-.+.....-++..|+.++-+..
T Consensus 184 hkelE~l~A~f~g~e-------~a~vF--~m-Gf~TNs~~--~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkH- 250 (519)
T KOG1357|consen 184 HKELEELVARFLGVE-------DAIVF--SM-GFATNSMN--IPSLLGKGSLIISDELNHASLITGARLSGATTRVFRH- 250 (519)
T ss_pred HHHHHHHHHHhcCCc-------ceEEE--ec-cccccccC--cceeecCCcceeeccccchheeccccccCceEEEEec-
Confidence 356777777775322 44443 33 34444444 5567888877766655555555556667777766654
Q ss_pred cCCCCCcCHHHHHHHHhcC----------CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 168 DPKTNGLDFQGMLQDLGAA----------PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 168 ~~~~~~~d~~~l~~~~~~~----------~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
-|.+.||+.+.+. +-++++++...-..=-|.+. ++.+++++++++..+++.||++.--...
T Consensus 251 ------Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv---~Lp~vvalkkkykayl~lDEAHSiGA~g 321 (519)
T KOG1357|consen 251 ------NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIV---DLPEVVALKKKYKAYLYLDEAHSIGAMG 321 (519)
T ss_pred ------CCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeec---ccHHHHHhhccccEEEEeeccccccccC
Confidence 1466666666431 22445666554443444433 4678899999999999999999665442
Q ss_pred cCCChhHHHHhh--hcCCeEEEEecccccccccc
Q 023599 238 MDADALPVRMFV--ADGGECLVAQSYSKTMGLYG 269 (280)
Q Consensus 238 ~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~~~G 269 (280)
.. --....+. +..+--|-+++|+|+||.+|
T Consensus 322 ~t--Grgvce~~g~d~~dvDImMGtftKSfga~G 353 (519)
T KOG1357|consen 322 AT--GRGVCEYFGVDPEDVDIMMGTFTKSFGAAG 353 (519)
T ss_pred CC--CcceeeccCCCchhheeecceehhhccccc
Confidence 10 00011111 12235577999999998765
No 374
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=97.29 E-value=0.021 Score=49.65 Aligned_cols=111 Identities=15% Similarity=0.032 Sum_probs=76.8
Q ss_pred CCCeEEeecccchhHHHHHHHHHHhhc--CCCEEEEeCCCCCC-----hHHHHHHcCCeeeEEEeecCCCCCcCHHHHHH
Q 023599 109 ENRVSTVQCLSGSGSLRIGADFLAKHY--YQHTVYLSQPTYGN-----HPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQ 181 (280)
Q Consensus 109 ~~~i~~v~t~g~~~al~~~~~~~~~~~--~Gd~Vli~~P~y~~-----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 181 (280)
++++++ +.+.+--++-+ +.+.++ +|++|++++-.-.+ ...++...|+. +.+ .....++++++
T Consensus 93 ~~Evvv--~dtts~nl~k~--L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~----~~~~~P~~~~~ 161 (407)
T COG3844 93 AGEVVV--TDTTSINLFKV--LAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL----EGVIAPRALEE 161 (407)
T ss_pred CCceEE--eCCcchHHHHH--HHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc----eeeeChHHHHH
Confidence 577776 77776666655 555554 68999998754332 23344444432 111 11345678888
Q ss_pred HHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 182 DLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 182 ~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
+++... .++++++-|.-||+.+. +.+|-+++++++++++.|-++.--..
T Consensus 162 ~~~dd~---AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav 210 (407)
T COG3844 162 AITDDV---AVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV 210 (407)
T ss_pred hhccce---EEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc
Confidence 887653 49999999999999885 66778899999999999999876655
No 375
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=97.24 E-value=0.0078 Score=55.00 Aligned_cols=188 Identities=10% Similarity=-0.047 Sum_probs=100.9
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCC-CCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSA-DKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCL 118 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~ 118 (280)
.+...+|-..|..-..-|+ -.++..+++.+++.+-... ...+.... ..+|-+.+++..-.. .-+++.+ +.
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh-~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~~-----~l~~vFf--~~ 112 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGH-GRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPEG-----GLDHVFF--TD 112 (449)
T ss_pred CCCEEEecccHHHHhhcCc-CCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCCC-----CccEEEE--eC
Confidence 3456777666643222222 2233444444555421111 11111111 445666666664211 1378888 99
Q ss_pred cchhHHHHHHHHHHh-----hcCCC-EEEEeCCCCCChHHHHHHc--------------CCeeeEEEeecC------CCC
Q 023599 119 SGSGSLRIGADFLAK-----HYYQH-TVYLSQPTYGNHPNFFAAA--------------GLAMKTYHYYDP------KTN 172 (280)
Q Consensus 119 g~~~al~~~~~~~~~-----~~~Gd-~Vli~~P~y~~~~~~~~~~--------------G~~~~~v~~~~~------~~~ 172 (280)
||++|.+.+..+... -+|.. +++.-..+|.+-.-..... -..+..++..+. ..+
T Consensus 113 sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~ 192 (449)
T COG0161 113 SGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEG 192 (449)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCC
Confidence 999999988443321 12333 4777778885531111111 111222222110 001
Q ss_pred C----cCHHHHHHHHhcCC-CCcEEEEecCCCCC-CCCCCCH-HHHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 173 G----LDFQGMLQDLGAAP-SGAIVLLQASGHNP-TGIDPTA-QQWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 173 ~----~d~~~l~~~~~~~~-~~~~~v~~~~p~NP-TG~~~~~-~~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
. -..++|++.+.++. ...+.++...-.-- +|..+++ .=++++.++|++||+++|.||+-..|.-
T Consensus 193 ~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGR 263 (449)
T COG0161 193 DEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGR 263 (449)
T ss_pred hHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCc
Confidence 1 23677888887764 55556665443434 6665544 4579999999999999999999988865
No 376
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.18 E-value=0.0081 Score=53.27 Aligned_cols=172 Identities=12% Similarity=0.022 Sum_probs=104.4
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhcc-CCC--CCC-CCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEe
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVND-LSA--DKE-YLPITGLPEFNKLSAKLIFGADSPAIKENRVSTV 115 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~-y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v 115 (280)
.+.+++||...++. ++....+..+.+...+..- -+. ..+ |+...=...|.+.||+|+... +.|+
T Consensus 92 ~G~~~~N~aS~NfL---~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E-------~aiv-- 159 (467)
T KOG1358|consen 92 DGKDVLNFASANFL---GLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTE-------DAIV-- 159 (467)
T ss_pred cCceeecccchhhh---hhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCc-------ceee--
Confidence 45688898877663 3334444444444444310 000 001 333333457889999997433 4444
Q ss_pred ecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCC-------C
Q 023599 116 QCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAP-------S 188 (280)
Q Consensus 116 ~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~-------~ 188 (280)
-+-|-.++..+ +-+++..||.|.+-.-.....+.-++...-.+.++.- .|.+.++..+.+.+ +
T Consensus 160 -Ys~gF~ti~S~--ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k 229 (467)
T KOG1358|consen 160 -YSYGFSTIESA--IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPK 229 (467)
T ss_pred -eccccchhhhc--chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccc
Confidence 34445556655 6778899999888765555555555544444555542 36677766665432 2
Q ss_pred C---cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 189 G---AIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 189 ~---~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
+ .++++..----+||...+ +.+|+++..|+...||.||.|+--..
T Consensus 230 ~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~l 277 (467)
T KOG1358|consen 230 KALTRRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVL 277 (467)
T ss_pred cccceEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccc
Confidence 1 346666555678888776 55668889999999999999966554
No 377
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=97.09 E-value=0.0092 Score=53.54 Aligned_cols=134 Identities=11% Similarity=-0.092 Sum_probs=78.1
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEE-EeCCCCCC--hHHHHHHcCCeeeEEEeecC--CCCCcCHHHHHHHHh
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVY-LSQPTYGN--HPNFFAAAGLAMKTYHYYDP--KTNGLDFQGMLQDLG 184 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vl-i~~P~y~~--~~~~~~~~G~~~~~v~~~~~--~~~~~d~~~l~~~~~ 184 (280)
.+|++ ...||+++++++ ..+++.+||+++ +..-++.. +...++.+| ++..+..... .+..++.+.+ .
T Consensus 68 y~Vlf-l~GggT~~~ea~--~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~ 139 (364)
T PRK12462 68 YGVVF-LQGGSSLQFSMI--PMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----D 139 (364)
T ss_pred CeEEE-EeccHHHHHHHH--HHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----c
Confidence 34554 377799999999 899999999665 44444422 345555666 5444431011 1233445543 2
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 185 AAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
..+ +...|.++.-...||+.++ ++.+.++.++|+|-+-.-+..+. ...+. =+++.|.=|.
T Consensus 140 ~~~-d~~~v~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~~~s~pi--------d~~~~---dvi~agsQKn 199 (364)
T PRK12462 140 WDA-RAPFRHYVSNETVEGLQFP--------DAAGLPDSPLIADMSSDFMSRPF--------DVEAY---GMVYAHAQKN 199 (364)
T ss_pred cCC-CCcEEEEccCCCCceEecC--------cccccCCCeEEEEcCchhhCCCC--------ChHHc---cEEEeecccc
Confidence 221 2336666655667787775 22334689999999865544321 11111 3567888999
Q ss_pred ccccccc
Q 023599 265 MGLYGER 271 (280)
Q Consensus 265 ~~~~G~R 271 (280)
+|.||+=
T Consensus 200 lgP~Glt 206 (364)
T PRK12462 200 LGPAGVT 206 (364)
T ss_pred CCCCceE
Confidence 9977653
No 378
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.04 E-value=0.05 Score=49.72 Aligned_cols=154 Identities=12% Similarity=0.156 Sum_probs=82.4
Q ss_pred HHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhc-CCCEEEEeCCCCCChHHHHH----HcCCeeeEE
Q 023599 90 EFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHY-YQHTVYLSQPTYGNHPNFFA----AAGLAMKTY 164 (280)
Q Consensus 90 ~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~-~Gd~Vli~~P~y~~~~~~~~----~~G~~~~~v 164 (280)
++...+++. .+.+. .|.-+ -.|++++-+.+.......+ .+++|+++.-.++.+..+++ ..|++++.+
T Consensus 114 e~Qs~i~eL-TGmdv-----aNaSl--yd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~ 185 (429)
T PF02347_consen 114 EYQSMICEL-TGMDV-----ANASL--YDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEV 185 (429)
T ss_dssp HHHHHHHHH-HTSSE-----E-SEB--SSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE
T ss_pred HHHHHHHHh-hCCCc-----cCCCC--CChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEe
Confidence 455555554 34432 23333 5577766666622222222 34699999999999988766 468899999
Q ss_pred EeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhH
Q 023599 165 HYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALP 244 (280)
Q Consensus 165 ~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 244 (280)
+. ++. ...| .++...|++.+|| -.|.+ +++++|.++++++|.+++. -+ ..+....
T Consensus 186 ~~-~~~-~~~d-----------~~~~a~v~vq~Pn-~~G~~---ed~~~i~~~~h~~gal~~~-~a-d~~aL~~------ 240 (429)
T PF02347_consen 186 PL-DED-GTTD-----------DDDTAAVMVQNPN-TFGVF---EDIKEIADIAHAAGALVIV-GA-DPNALGG------ 240 (429)
T ss_dssp -B-BTT-CSB------------STTEEEEEEESS--TTSB-----THHHHHHHHHHTT-EEEE-CG-GCCGCCT------
T ss_pred cc-ccc-CCcc-----------ccCeEEEEeecCC-CCceE---eeHHHHHHHHHHcCCEEEE-ec-CHHHHhC------
Confidence 87 332 2333 2345678887775 55654 3488999999999988876 22 1222111
Q ss_pred HHHhhhcCCeEEEEeccccccccc----ccccceEEEE
Q 023599 245 VRMFVADGGECLVAQSYSKTMGLY----GERVGALSVV 278 (280)
Q Consensus 245 ~~~~~~~~~~~i~~~S~SK~~~~~----G~RvG~~v~~ 278 (280)
+.+..+.+..++ +++ .|.||.| |=-.|++.+.
T Consensus 241 l~~Pge~GADI~-vg~-~Q~fg~p~~~GGP~~G~~a~~ 276 (429)
T PF02347_consen 241 LKSPGEYGADIV-VGE-HQTFGIPMGFGGPGAGFFAVR 276 (429)
T ss_dssp C--GGGGT-SEE-EEC-CTTTT---CCC-S--EEEEE-
T ss_pred cCChhhcCccEE-eeC-CCCCcccCCCCCCCeeeEEEh
Confidence 123334556777 777 8888764 3345665554
No 379
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=96.77 E-value=0.08 Score=53.02 Aligned_cols=111 Identities=10% Similarity=0.098 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHh--h-cCCCEEEEeCCCCCChHHHHH----HcCCeee
Q 023599 90 EFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAK--H-YYQHTVYLSQPTYGNHPNFFA----AAGLAMK 162 (280)
Q Consensus 90 ~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~--~-~~Gd~Vli~~P~y~~~~~~~~----~~G~~~~ 162 (280)
++++.+++. .+.+ ..|..+ ..+++.+.+++ +++. . +++++|++++-.++.+..+++ ..|++++
T Consensus 113 e~Qt~i~eL-tGm~-----~aNaSl--~d~atA~aEa~--~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~ 182 (939)
T TIGR00461 113 NFQTVVSDL-TGLP-----VANASL--LDEGTAAAEAM--ALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVI 182 (939)
T ss_pred HHHHHHHHH-HCCC-----hhhhhc--cchhhHHHHHH--HHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEE
Confidence 455556655 3332 245555 77888877766 4442 2 234899999999998887766 6788887
Q ss_pred EEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcc
Q 023599 163 TYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDC 229 (280)
Q Consensus 163 ~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De 229 (280)
.+++ +.|+..+ + ...+++.+| |-+|.+. ++++|+++++++|.+++++.
T Consensus 183 ~~~~----------~~l~~~~--~---~~~v~~q~P-n~~G~ie---d~~~i~~~~h~~gal~~~~a 230 (939)
T TIGR00461 183 VVDC----------SDIKKAV--D---VFGCLLQYP-ATDGSIL---DYKQLIDALHSHKSLVSVAA 230 (939)
T ss_pred EEcH----------HHHhhcC--C---EEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEe
Confidence 7754 3344443 1 235666565 5778764 68899999999999999854
No 380
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.66 E-value=0.0045 Score=55.31 Aligned_cols=150 Identities=11% Similarity=-0.002 Sum_probs=79.5
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh--cCCCEEEEeCCCCCChHHHHHHcCCeeeEEEee-cCCCCCcCHHHHHHHHhcC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH--YYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYY-DPKTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~--~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~~~~~ 186 (280)
...++ ++.+|+--..+. ++++- ..++.|+.+.-........+..+|.+++.|+.. +++....|.+.+++.+++.
T Consensus 75 ~~~~~--vP~atgm~l~l~-l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~ 151 (389)
T PF05889_consen 75 KSCFV--VPMATGMSLTLC-LLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEEL 151 (389)
T ss_dssp CEEEE--ESS-HHHHHHHH-HHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHH
T ss_pred cceEE--EecccccHHHHH-HHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHh
Confidence 44444 666554332221 33332 356888888654433344455689999888753 2333455788999988765
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
....++.+++..+---|. -.+++++|.++|+++|+..|+..+|.--.... -..+......+--=+++.|+-|.|=
T Consensus 152 G~~~iLcvltttscfapr--~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~---~~~i~~a~~~GRvda~vqS~dkNF~ 226 (389)
T PF05889_consen 152 GADNILCVLTTTSCFAPR--LPDDIEEIAKICKEYDIPHLVNNAYGVQSSKC---MHLIQQAWRVGRVDAFVQSTDKNFM 226 (389)
T ss_dssp CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HHH---HHHHHHHHHHSTCSEEEEEHHHHHC
T ss_pred CCCCeEEEEEecCccCCC--CCccHHHHHHHHHHcCCceEEccchhhhHHHH---HHHHHHHHhcCCcceeeeecCCCEE
Confidence 444455555443332222 23459999999999999999999997643311 0011111122221256888888884
Q ss_pred c
Q 023599 267 L 267 (280)
Q Consensus 267 ~ 267 (280)
.
T Consensus 227 V 227 (389)
T PF05889_consen 227 V 227 (389)
T ss_dssp E
T ss_pred e
Confidence 3
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=96.60 E-value=0.0036 Score=56.48 Aligned_cols=93 Identities=15% Similarity=0.151 Sum_probs=69.1
Q ss_pred EEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHH
Q 023599 139 TVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA---PSGAIVLLQASGHNPTGIDPTAQQWEQIR 215 (280)
Q Consensus 139 ~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~v~~~~p~NPTG~~~~~~~l~~i~ 215 (280)
.+..++-.....+..+...|.+++.++. ++ +++++.+.|++++.+. .-.+.+++. +-=|..+-+-+++.+|.
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~t-d~-n~~mr~~~L~~AIe~D~arGlIPf~v~a---t~GTT~~ca~D~l~elg 258 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPT-DE-NFGMRGDTLRKAIEEDIARGLIPFFVCA---TLGTTSSCAFDELEELG 258 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeec-cc-CcCCCHHHHHHHHHHHHhCCCccEEEEE---eecCccccccccHHHhc
Confidence 3455566666677777778889999998 34 8999999999999864 222334443 22333344678899999
Q ss_pred HHHHhCCceeEEcccCCCccc
Q 023599 216 QLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 216 ~~~~~~~~~ii~De~y~~~~~ 236 (280)
.+|+++++|+-+|.+|+.-.+
T Consensus 259 ~Vc~~~glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 259 PVCREEGLWLHVDAAYAGSAF 279 (511)
T ss_pred chhhhcCEEEEeehhhccccc
Confidence 999999999999999986655
No 382
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=96.49 E-value=0.1 Score=46.50 Aligned_cols=221 Identities=15% Similarity=0.096 Sum_probs=116.9
Q ss_pred CCCCeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeeccc
Q 023599 40 PSPMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLS 119 (280)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g 119 (280)
++..++|+..|.....-|+ --++.+..+.+++..--.....|... -..+|.+++++.+-+.- ..+++ +++
T Consensus 48 ~G~ryLD~f~Gi~tvslGH-chP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~P~~l------~~vfF--~ns 117 (442)
T KOG1404|consen 48 EGRRYLDAFGGIVTVSLGH-CHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKLPGDL------KVVFF--VNS 117 (442)
T ss_pred CCceeehhhCCeEEEEcCC-CChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhCCCCc------eEEEE--ecC
Confidence 4567788887765333232 23344455555543111112334332 35678888887753321 34556 999
Q ss_pred chhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH-HHcCCeeeEEEe------------ecCCC--CCcC-----H---
Q 023599 120 GSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF-AAAGLAMKTYHY------------YDPKT--NGLD-----F--- 176 (280)
Q Consensus 120 ~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~-~~~G~~~~~v~~------------~~~~~--~~~d-----~--- 176 (280)
|++|.+++..+..+-...-.++--.-+|.+..... ...|......+. .++.. ++=+ .
T Consensus 118 GsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~ 197 (442)
T KOG1404|consen 118 GSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRY 197 (442)
T ss_pred CchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHH
Confidence 99999999433322222235555556775543332 222222111111 00000 1101 2
Q ss_pred -HHHHHHHhcC-CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCC
Q 023599 177 -QGMLQDLGAA-PSGAIVLLQASGHNPTGID-PTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGG 253 (280)
Q Consensus 177 -~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~-~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 253 (280)
++++..+... +...+.++...-+---|.+ +++-=+++..++|+++|.++|.||+...|.--. .. ..+. ..+
T Consensus 198 a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG--~~---wgfe-~h~ 271 (442)
T KOG1404|consen 198 AKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG--HM---WGFE-SHG 271 (442)
T ss_pred HHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc--cc---cccc-ccC
Confidence 3444444433 2333444444433333433 445568999999999999999999998886532 12 2221 111
Q ss_pred eEEEEecccccccccccccceEEE
Q 023599 254 ECLVAQSYSKTMGLYGERVGALSV 277 (280)
Q Consensus 254 ~~i~~~S~SK~~~~~G~RvG~~v~ 277 (280)
-+==|-+++|.+| .|.-+|.++.
T Consensus 272 v~PDIvTmAKgiG-nG~Pl~AVvt 294 (442)
T KOG1404|consen 272 VVPDIVTMAKGIG-NGFPLGAVVT 294 (442)
T ss_pred CCccHHHHHhhcc-CCCcceeeec
Confidence 1222568899998 7899998765
No 383
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=96.26 E-value=0.2 Score=45.27 Aligned_cols=153 Identities=12% Similarity=0.133 Sum_probs=90.0
Q ss_pred EeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCC-----CCC----HHHHHHHHHHHhCCCCccccCCCeEEee
Q 023599 46 NLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPI-----TGL----PEFNKLSAKLIFGADSPAIKENRVSTVQ 116 (280)
Q Consensus 46 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-----~G~----~~lr~~ia~~l~~~~~~~~~~~~i~~v~ 116 (280)
-++.|.+ + . ..++.+. +.+..++.....|+|- +|. -+++..+++. .+.+. .|--.
T Consensus 79 fiG~GyY---~-~-~~P~vI~---rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL-TGm~V-----ANASm-- 142 (450)
T COG0403 79 FIGAGYY---D-T-YTPPVIL---RNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADL-TGLDV-----ANASM-- 142 (450)
T ss_pred hccCccc---C-C-cCcHHHH---HHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHH-hCCCc-----ccchh--
Confidence 4567776 2 1 3334443 2344335555667663 332 2334444443 44443 33333
Q ss_pred cccchhHHHHHHHHHHhhc-CCCEEEEeCCCCCChHHHHHH----cCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcE
Q 023599 117 CLSGSGSLRIGADFLAKHY-YQHTVYLSQPTYGNHPNFFAA----AGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAI 191 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~-~Gd~Vli~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 191 (280)
-.++|.+-+++.......+ +..+|+++.-.|+.+..+++- .|.+++.++. + |.+.+++. ... ...
T Consensus 143 ~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~-~------d~~~l~~~-~~~--~~~ 212 (450)
T COG0403 143 LDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA-D------DLDDLESA-DDG--DVF 212 (450)
T ss_pred hhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEecc-c------hhhhhhhc-ccc--CeE
Confidence 5667776666632223333 358999999999999999873 4567776665 1 67777776 322 223
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 192 VLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 192 ~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
.+++.+| ...-....+++++.+.+++++.++++
T Consensus 213 gv~vQyP---~~~G~~~~d~~~l~~~~h~~~al~~v 245 (450)
T COG0403 213 GVLVQYP---NTFGIVEEDLRALIEAAHSAGALVIV 245 (450)
T ss_pred EEEEecC---CCCCccchhHHHHHHHHhhcCCEEEE
Confidence 5555444 43335667899999999999876664
No 384
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.22 E-value=0.07 Score=50.54 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=95.8
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh---HHHHHHHHHHhhcCC--CEEEEeCCCCCCh
Q 023599 79 DKEYLP---ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG---SLRIGADFLAKHYYQ--HTVYLSQPTYGNH 150 (280)
Q Consensus 79 ~~~y~~---~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~---al~~~~~~~~~~~~G--d~Vli~~P~y~~~ 150 (280)
.+.|.| .+|+.++-+.+-++|..-.+. +++.+-.-+|+++ ++..+..++.....| ...+||....+..
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~----D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 568 IHPFAPVEQAQGYQQLFTELEKDLCEITGF----DSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTN 643 (1001)
T ss_pred CCCCCchHHHhhHHHHHHHHHHHhheeecc----cceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCC
Confidence 455666 356666666666665443332 5555432333332 333332222222233 3577787788878
Q ss_pred HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEccc
Q 023599 151 PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCA 230 (280)
Q Consensus 151 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~ 230 (280)
...+.+.|.+++.|.+ ..++.+|...|++...++.++-..++++.|+ ..-+-.+.+++++++..+||--|-.|-+
T Consensus 644 PASA~MagmkvvpV~~--~~~G~id~~dLk~kaekh~~~Laa~MvTYPS---T~GvfE~~i~d~cd~iHehGGQVYlDGA 718 (1001)
T KOG2040|consen 644 PASAAMAGMKVVPVGC--DANGNIDMVDLKAKAEKHKDNLAALMVTYPS---THGVFEEGIDDICDIIHEHGGQVYLDGA 718 (1001)
T ss_pred hhhHHhcCCEEEEeec--cCCCCccHHHHHHHHHHhhhhhheeEEeccc---ccccccccHHHHHHHHHhcCCEEEecCC
Confidence 8888899999999998 3456799999999998876666677775554 3335567799999999999999988887
Q ss_pred C
Q 023599 231 Y 231 (280)
Q Consensus 231 y 231 (280)
.
T Consensus 719 N 719 (1001)
T KOG2040|consen 719 N 719 (1001)
T ss_pred C
Confidence 6
No 385
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=95.75 E-value=0.076 Score=47.83 Aligned_cols=91 Identities=11% Similarity=0.096 Sum_probs=61.8
Q ss_pred CEEEEe-CCCCCChHHHHHHcC---CeeeEEEeecCCCCCcCHHHHHHHHhcCCCC---cEEEEecCCCCCCCCCCCHHH
Q 023599 138 HTVYLS-QPTYGNHPNFFAAAG---LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSG---AIVLLQASGHNPTGIDPTAQQ 210 (280)
Q Consensus 138 d~Vli~-~P~y~~~~~~~~~~G---~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~---~~~v~~~~p~NPTG~~~~~~~ 210 (280)
+-|+.. +-++......+..+| -.++.|+. .+.+.+++++||+.+.+...+ +.++..+..+..-| .-++
T Consensus 197 ~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~G---AFDd 271 (510)
T KOG0629|consen 197 PLILFTSEESHYSIKKAAAFLGLGTDHCIKVKT--DERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLG---AFDD 271 (510)
T ss_pred cEEEEecccchhhHHHHHHHhccCCceeEEecc--cccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeee---ccCc
Confidence 334443 334444666666677 36777777 345689999999999765333 44444333333444 4567
Q ss_pred HHHHHHHHHhCCceeEEcccCCC
Q 023599 211 WEQIRQLMRLKRLLPFFDCAYQG 233 (280)
Q Consensus 211 l~~i~~~~~~~~~~ii~De~y~~ 233 (280)
+..|+++|++|++|+.+|.+|+.
T Consensus 272 L~~iadiC~k~~lWmHvDAAwGG 294 (510)
T KOG0629|consen 272 LNGIADICEKHKLWMHVDAAWGG 294 (510)
T ss_pred HHHHHHHHHhcCEEEEeeccccc
Confidence 88889999999999999999987
No 386
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=95.58 E-value=0.084 Score=46.70 Aligned_cols=145 Identities=15% Similarity=0.136 Sum_probs=89.1
Q ss_pred EeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH-HHHcCC---------eeeEEEeecCCCCCcCHHHHHHHH
Q 023599 114 TVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF-FAAAGL---------AMKTYHYYDPKTNGLDFQGMLQDL 183 (280)
Q Consensus 114 ~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~-~~~~G~---------~~~~v~~~~~~~~~~d~~~l~~~~ 183 (280)
-|+..+|+.|.+.+ +.+++.|+++|+--+.--+++... ...-+- +--++.+ ++.++-+|.|.|++..
T Consensus 109 NVQp~SGSPANfav--Ytall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv-~~~TG~IDYD~Le~~A 185 (477)
T KOG2467|consen 109 NVQPYSGSPANFAV--YTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKV-DPSTGYIDYDKLEKTA 185 (477)
T ss_pred eeccCCCCchhhHH--HhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceee-CCCCCceehHHHHHHH
Confidence 36789999999999 999999999998776544443211 111111 1122334 5677889999999987
Q ss_pred hcCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhCCceeEEcccC-CCcccCcCCChhHHHHhhhcCCeEEEEecc
Q 023599 184 GAAPSGAIVLLQASGHNPTGIDPT-AQQWEQIRQLMRLKRLLPFFDCAY-QGFVMNMDADALPVRMFVADGGECLVAQSY 261 (280)
Q Consensus 184 ~~~~~~~~~v~~~~p~NPTG~~~~-~~~l~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 261 (280)
..-.+ + +++--. ..++ .-+..++.++|.+.|.+++.|-++ +.++... ..++..... =|+..+.
T Consensus 186 ~~frP-k-~iiaG~------SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~--vipsPFey~-----DiVTTTT 250 (477)
T KOG2467|consen 186 TLFRP-K-LIIAGT------SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAG--VIPSPFEYC-----DIVTTTT 250 (477)
T ss_pred HhcCC-c-EEEecc------ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcc--cCCCccccc-----ceeeccc
Confidence 65422 2 444211 1122 234577788889999999999988 3333321 111112221 2667888
Q ss_pred cccccccccccceEEEE
Q 023599 262 SKTMGLYGERVGALSVV 278 (280)
Q Consensus 262 SK~~~~~G~RvG~~v~~ 278 (280)
-|++ -|=|-|.+...
T Consensus 251 HKsL--RGPRg~mIFyR 265 (477)
T KOG2467|consen 251 HKSL--RGPRGAMIFYR 265 (477)
T ss_pred cccc--cCCcceeEEEe
Confidence 8886 47788876643
No 387
>PLN02672 methionine S-methyltransferase
Probab=95.57 E-value=0.24 Score=50.48 Aligned_cols=213 Identities=11% Similarity=-0.011 Sum_probs=123.0
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
.-+||++.+- .....-.+-+......+. ......|.++.|...||+.||.|+...++.++++++|++ .++-..
T Consensus 388 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 460 (1082)
T PLN02672 388 GSLDLSFEDE---SVADEKIPFLAYLASALK--GLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVV--FPSRAV 460 (1082)
T ss_pred hhcccccccc---ccchhhccHHHHHHHHHc--cCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEE--eccHHH
Confidence 4567765431 111122223333334444 444678999999999999999999988999999999998 999999
Q ss_pred HHHHHHHHHH----hhcCCCEEEEeCCCCCChHHHHHHcCC-------eeeEEEeecCCCCCcCHHHHHHHHhcCCCCcE
Q 023599 123 SLRIGADFLA----KHYYQHTVYLSQPTYGNHPNFFAAAGL-------AMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAI 191 (280)
Q Consensus 123 al~~~~~~~~----~~~~Gd~Vli~~P~y~~~~~~~~~~G~-------~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 191 (280)
|++.+.++.+ +++.+.+-.++ ..+...+...|. ..++|-- .+. .-+.+.+++.+- ++.
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~--~~~ 529 (1082)
T PLN02672 461 AIENALRLFSPRLAIVDEHLTRWLP----KKWLTSLAIENATSDSKSDDVITVIE-APR----QSDLVIELIKKL--KPQ 529 (1082)
T ss_pred HHHHHHHhhChHHHhhhhhhhccCC----HHHHhHhhhhcccccCccCCeEEEEe-CCC----cchHHHHHHHhC--CCe
Confidence 9988844432 33344333332 122333333221 1111111 111 123445555433 122
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccC-CCcccCcCCChhHHHHhhh--cCCeEEEEeccccccccc
Q 023599 192 VLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAY-QGFVMNMDADALPVRMFVA--DGGECLVAQSYSKTMGLY 268 (280)
Q Consensus 192 ~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~~ 268 (280)
+|+..-.. +-..+...++.|++.+++.|..++.|.+- .++..-+. +..-++.+.. ...+..++.++-|+--.+
T Consensus 530 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1082)
T PLN02672 530 VVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPG-SNGVLKYLAGHPLPSHAAIICGLVKNQVYS 605 (1082)
T ss_pred EEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCC-cccHHHHhcCCCCCcchhHhhhhhhccccc
Confidence 55553333 33456677899999999999999999863 34443221 1112222222 233777788888877667
Q ss_pred ccccceEEE
Q 023599 269 GERVGALSV 277 (280)
Q Consensus 269 G~RvG~~v~ 277 (280)
.+-+.+++-
T Consensus 606 ~~~~~~~~~ 614 (1082)
T PLN02672 606 DLEVAFVIS 614 (1082)
T ss_pred cceEEEEec
Confidence 887777653
No 388
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=91.71 E-value=5.8 Score=33.92 Aligned_cols=148 Identities=14% Similarity=0.067 Sum_probs=80.4
Q ss_pred CCeEEeecccchhHHHHHHHHHHhh--cCC-CEEEEeCCCCCChHHHHHHcCCeeeEE-EeecCCCCCcCHHHHHHHHhc
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKH--YYQ-HTVYLSQPTYGNHPNFFAAAGLAMKTY-HYYDPKTNGLDFQGMLQDLGA 185 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~--~~G-d~Vli~~P~y~~~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~~~~~~ 185 (280)
.+.++|...-|+ ++.+. ++++- +|. ..|+-+.-.-.......-..|++++-+ +..+.+.-..|++.++..+++
T Consensus 76 ~nc~vvpl~tgm-slslc--~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee 152 (432)
T KOG3843|consen 76 ANCFVVPLATGM-SLSLC--FLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEE 152 (432)
T ss_pred hceeEEeccccc-cHHHH--HHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHH
Confidence 555553333333 34444 34332 344 334433322222233334678887666 443444455689999998887
Q ss_pred CCCCcEEEEe-c--CCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccc
Q 023599 186 APSGAIVLLQ-A--SGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYS 262 (280)
Q Consensus 186 ~~~~~~~v~~-~--~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 262 (280)
....- ++++ + ++--| -+++.+++|..+|..|++.-|+.++|+--..+. .-.+....+.+.-=.++.|+-
T Consensus 153 ~g~dc-ilci~sttscfap----r~pd~leaiaaica~~diphivnnayglqsee~---i~~iaa~~~~grida~vqsld 224 (432)
T KOG3843|consen 153 LGEDC-ILCIHSTTSCFAP----RSPDNLEAIAAICAAHDIPHIVNNAYGLQSEEC---IHKIAAAAECGRIDAFVQSLD 224 (432)
T ss_pred hCCce-EEEEeecccccCC----CCCchHHHHHHHHHccCchhhhccccccchHHH---HHHHHHHhhhccHHHHHHHhh
Confidence 74433 3443 1 11122 256789999999999999999999997654321 001111111121124567777
Q ss_pred cccccc
Q 023599 263 KTMGLY 268 (280)
Q Consensus 263 K~~~~~ 268 (280)
|.|-+|
T Consensus 225 knf~vp 230 (432)
T KOG3843|consen 225 KNFMVP 230 (432)
T ss_pred hcceee
Confidence 777544
No 389
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=91.32 E-value=0.34 Score=42.46 Aligned_cols=61 Identities=13% Similarity=0.175 Sum_probs=47.0
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHH-HHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 175 DFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQ-QWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 175 d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~-~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
|.+.|+..+.. ++.+.+++..-+--.|+++++. =+++..++|++||+++|.||+...+.-.
T Consensus 195 d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RT 256 (427)
T KOG1402|consen 195 DAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLART 256 (427)
T ss_pred CHHHHHHHhcC--CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhccccc
Confidence 68899998876 3445666665667777766554 4789999999999999999999877653
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=90.63 E-value=4.8 Score=40.70 Aligned_cols=147 Identities=10% Similarity=0.082 Sum_probs=78.8
Q ss_pred eeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCC-----CC----HHHHHHHHHHHhCCCCccccCCCeEE
Q 023599 44 KLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPIT-----GL----PEFNKLSAKLIFGADSPAIKENRVST 114 (280)
Q Consensus 44 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~-----G~----~~lr~~ia~~l~~~~~~~~~~~~i~~ 114 (280)
..-++.|.+ + ...+..+. +.+..+++....|.|-+ |. .+++..+++. .+.+. .|--+
T Consensus 81 ~~fiG~G~y---~--~~~P~vi~---~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~L-tGm~v-----aNASl 146 (954)
T PRK12566 81 TSLIGMGYH---G--TVTPTVIL---RNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDL-TGLDL-----ANASL 146 (954)
T ss_pred ccccccccc---C--CcCcHHHH---HHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHH-hCchh-----hhhhh
Confidence 345677776 2 13334442 22332244455666643 32 3455555554 34332 22223
Q ss_pred eecccchhHHHHHHHHHHhhc-CCCEEEEeCCCCCChHHHHH----HcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCC
Q 023599 115 VQCLSGSGSLRIGADFLAKHY-YQHTVYLSQPTYGNHPNFFA----AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSG 189 (280)
Q Consensus 115 v~t~g~~~al~~~~~~~~~~~-~Gd~Vli~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~ 189 (280)
-.+++.+-+++.......+ ...+|+|++-.++.+..+++ ..|++++. +.+++.+.+ +
T Consensus 147 --~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~---~ 208 (954)
T PRK12566 147 --LDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAH---A 208 (954)
T ss_pred --ccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCC---C
Confidence 4466655554411112222 24689999999988888776 34555543 222232322 2
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeE
Q 023599 190 AIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPF 226 (280)
Q Consensus 190 ~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii 226 (280)
...+++.+|| -.|.+ +++++|.++++++|.++|
T Consensus 209 ~~~v~vq~P~-~~G~i---~d~~~i~~~~h~~gal~~ 241 (954)
T PRK12566 209 VFGALLQYPD-THGEI---RDLRPLIDQLHGQQALAC 241 (954)
T ss_pred EEEEEEECCC-CceEE---ccHHHHHHHHHHcCCEEE
Confidence 3466666664 67766 568888999999998765
No 391
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=89.84 E-value=2.1 Score=37.16 Aligned_cols=154 Identities=16% Similarity=0.108 Sum_probs=85.7
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH-------HcCC---eeeEE---Eeec-----------CC-C
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA-------AAGL---AMKTY---HYYD-----------PK-T 171 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~-------~~G~---~~~~v---~~~~-----------~~-~ 171 (280)
+++|++|.+++.++..-...-.-|++.+-.|.++..... ..|. ++.++ |+.| +. +
T Consensus 108 ~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~ 187 (452)
T KOG1403|consen 108 VNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDAD 187 (452)
T ss_pred ecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCccc
Confidence 999999999996655544444455666667766543321 0121 22222 2211 00 0
Q ss_pred -CCcCHHHHHHHHh---cCCCCcEEEEecCCCCCCCCCCCHHH-HHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHH
Q 023599 172 -NGLDFQGMLQDLG---AAPSGAIVLLQASGHNPTGIDPTAQQ-WEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVR 246 (280)
Q Consensus 172 -~~~d~~~l~~~~~---~~~~~~~~v~~~~p~NPTG~~~~~~~-l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 246 (280)
...=.+.+++.++ .+..+...++-.+-+.=-|+++++.. .+++++..+.+|-+.|.||+.-.|.-- ...+|++.
T Consensus 188 ~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRv-G~hyWafq 266 (452)
T KOG1403|consen 188 MGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRV-GSHYWAFQ 266 (452)
T ss_pred chhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccccc-chhhhhhh
Confidence 0011233333332 22233334554455555677776655 588889999999999999999887653 23455544
Q ss_pred HhhhcCCeEEEEecccccccccccccceEE
Q 023599 247 MFVADGGECLVAQSYSKTMGLYGERVGALS 276 (280)
Q Consensus 247 ~~~~~~~~~i~~~S~SK~~~~~G~RvG~~v 276 (280)
.+ +.-+.+ -++.|-.| .|.-++.++
T Consensus 267 ~y-~fiPDI---VtmgKpmG-NGhPVa~Va 291 (452)
T KOG1403|consen 267 TY-NFIPDI---VTMGKPMG-NGHPVAAVA 291 (452)
T ss_pred hh-ccccch---heecccCC-CCCeeeEEe
Confidence 33 111233 35568887 788787765
No 392
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=87.36 E-value=1.6 Score=38.87 Aligned_cols=70 Identities=11% Similarity=0.042 Sum_probs=46.4
Q ss_pred HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 151 PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 151 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
...+..+.+++..+.+.|..+|.+..+.+.++-..... .....+.|..++.+|+++|++.|+++||-||-
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~-------~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS-------TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCcccccccccc-------cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 34455678888888886666666665554443211111 01234567789999999999999999987763
No 393
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=86.10 E-value=4.5 Score=35.30 Aligned_cols=89 Identities=10% Similarity=0.100 Sum_probs=47.0
Q ss_pred ccCCCeEEeecccchhHHHHHHHHHHhhcCC-C-EEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHh
Q 023599 107 IKENRVSTVQCLSGSGSLRIGADFLAKHYYQ-H-TVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLG 184 (280)
Q Consensus 107 ~~~~~i~~v~t~g~~~al~~~~~~~~~~~~G-d-~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~ 184 (280)
+.+...++-.|+ |+-++.++ +.+.. .| . .+.+|+-.-......++.+|++++.+|- .+....=-.+..++...
T Consensus 59 l~pG~tIVE~TS-GNTGI~LA--~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~-~~g~~~~a~~~a~el~~ 133 (300)
T COG0031 59 LKPGGTIVEATS-GNTGIALA--MVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG-APGNMKGAIERAKELAA 133 (300)
T ss_pred CCCCCEEEEcCC-ChHHHHHH--HHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC-CCCchHHHHHHHHHHHH
Confidence 556666665454 45566666 44322 34 2 3444443445567888999999999986 22111112333344444
Q ss_pred cCCCCcEEEEecCCCCCC
Q 023599 185 AAPSGAIVLLQASGHNPT 202 (280)
Q Consensus 185 ~~~~~~~~v~~~~p~NPT 202 (280)
+.+. .++..+.+.||.
T Consensus 134 ~~p~--~~~~~~Qf~Npa 149 (300)
T COG0031 134 EIPG--YAVWLNQFENPA 149 (300)
T ss_pred hCCC--ceEchhhcCCCc
Confidence 4432 245544455554
No 394
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=85.02 E-value=2.7 Score=36.81 Aligned_cols=69 Identities=10% Similarity=0.011 Sum_probs=46.0
Q ss_pred HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 151 PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 151 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
...+..++.++..+.+.|..+|.+....+.++-... .. .++ .+.|-.++++|+++|++.|+++|+-||-
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g-~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKG-GQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhc-cc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 344556788888888866666766655555543221 10 112 2445579999999999999999987663
No 395
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=84.34 E-value=2.6 Score=37.52 Aligned_cols=87 Identities=8% Similarity=0.051 Sum_probs=50.9
Q ss_pred HHHHHHHHhcCC---CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhCCceeEEcccCCCcccCc---CCChhHHHHh
Q 023599 176 FQGMLQDLGAAP---SGAIVLLQASGHNPTGI-DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNM---DADALPVRMF 248 (280)
Q Consensus 176 ~~~l~~~~~~~~---~~~~~v~~~~p~NPTG~-~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~ 248 (280)
++++++.+.+.. +..+.+++..-+.--|. --|++-++.|.+++++|++.+|+||+.-.-.... .++++-+.+.
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 456666665432 22334444333333332 3578899999999999999999999985544321 1223222222
Q ss_pred hhcCCeEEEEecccccccccc
Q 023599 249 VADGGECLVAQSYSKTMGLYG 269 (280)
Q Consensus 249 ~~~~~~~i~~~S~SK~~~~~G 269 (280)
.. +-+|||-|-..|
T Consensus 335 ----pD---~vTFSKK~q~gG 348 (484)
T KOG1405|consen 335 ----PD---VVTFSKKFQTGG 348 (484)
T ss_pred ----cc---ceehhhhhhcCc
Confidence 22 346888875444
No 396
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=82.21 E-value=3.2 Score=37.19 Aligned_cols=65 Identities=14% Similarity=0.078 Sum_probs=44.9
Q ss_pred HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 151 PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 151 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
...+..+.+++..+.+.|...|.+....+.++.... . ...|..++.+|+++|++.|+++||-||-
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g-a-----------~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 24 IDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG-A-----------YSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc-C-----------cCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 344456778888888866666777665555532211 0 1245679999999999999999987764
No 397
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=80.76 E-value=3.8 Score=36.11 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=40.4
Q ss_pred HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeE
Q 023599 151 PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPF 226 (280)
Q Consensus 151 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii 226 (280)
...+..+..++....+.|..+|.+....+.+.. +. . ..|..++.+|+++|++.|+++|+-||
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt-~~---------g----~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 24 LDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQ-QK---------A----SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHHHHHhCCeEEEEEEecCCCceeecCCCcccc-cc---------C----CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 344456777888888755555555443332211 11 0 13556999999999999999998766
No 398
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=76.44 E-value=22 Score=29.35 Aligned_cols=79 Identities=14% Similarity=0.138 Sum_probs=44.7
Q ss_pred hcCC-CEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHH
Q 023599 134 HYYQ-HTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWE 212 (280)
Q Consensus 134 ~~~G-d~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~ 212 (280)
+..| ...++..+.-......++..|++++..++ -|.+.|.++++.-. . +++...+.++ -..+.-+
T Consensus 19 ~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-------~~~~~l~~al~g~d--~-v~~~~~~~~~----~~~~~~~ 84 (233)
T PF05368_consen 19 LSAGFSVRALVRDPSSDRAQQLQALGAEVVEADY-------DDPESLVAALKGVD--A-VFSVTPPSHP----SELEQQK 84 (233)
T ss_dssp HHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-------T-HHHHHHHHTTCS--E-EEEESSCSCC----CHHHHHH
T ss_pred HhCCCCcEEEEeccchhhhhhhhcccceEeeccc-------CCHHHHHHHHcCCc--e-EEeecCcchh----hhhhhhh
Confidence 3455 33444444322233445678988876665 27899999997542 2 4444333333 2456678
Q ss_pred HHHHHHHhCCceeE
Q 023599 213 QIRQLMRLKRLLPF 226 (280)
Q Consensus 213 ~i~~~~~~~~~~ii 226 (280)
.+++.|++.|+-.+
T Consensus 85 ~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 85 NLIDAAKAAGVKHF 98 (233)
T ss_dssp HHHHHHHHHT-SEE
T ss_pred hHHHhhhccccceE
Confidence 89999999875433
No 399
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=76.43 E-value=35 Score=27.99 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=55.6
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSG 189 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~ 189 (280)
..+++ ..||..|..-+ ..++..|-.|.+.+|....-...+...| ++..+.- . .+.+. +..
T Consensus 10 k~vlV--vGgG~va~rk~---~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~d----l~~---- 69 (205)
T TIGR01470 10 RAVLV--VGGGDVALRKA---RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADI----LEG---- 69 (205)
T ss_pred CeEEE--ECcCHHHHHHH---HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHH----hCC----
Confidence 45666 78888777766 3456677788888887764433333344 4444432 1 12221 221
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCcee-EEcc-cCCCccc
Q 023599 190 AIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLP-FFDC-AYQGFVM 236 (280)
Q Consensus 190 ~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~i-i~De-~y~~~~~ 236 (280)
. .+++..+++| +--+++++.|++.++++ +.|+ -.++|.+
T Consensus 70 ~-~lVi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~ 110 (205)
T TIGR01470 70 A-FLVIAATDDE-------ELNRRVAHAARARGVPVNVVDDPELCSFIF 110 (205)
T ss_pred c-EEEEECCCCH-------HHHHHHHHHHHHcCCEEEECCCcccCeEEE
Confidence 2 3333445544 22367899999999877 2343 4456655
No 400
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=74.64 E-value=8.7 Score=34.53 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=44.8
Q ss_pred HHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCc-EEE-E--ecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 152 NFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGA-IVL-L--QASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 152 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~-~~v-~--~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
..+..++++...+.+.|...|.+....+.++-....... ..+ . ...-..|.|-.++.+|+++|++.|+++|+-||-
T Consensus 25 d~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VIP 104 (357)
T cd06563 25 DLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVIP 104 (357)
T ss_pred HHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEEE
Confidence 344456777888887666666666555544321110000 000 0 001123556789999999999999999987663
No 401
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=73.45 E-value=11 Score=35.10 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=45.7
Q ss_pred HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCc------EEEE---ecCC--CCCCCCCCCHHHHHHHHHHHH
Q 023599 151 PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGA------IVLL---QASG--HNPTGIDPTAQQWEQIRQLMR 219 (280)
Q Consensus 151 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~------~~v~---~~~p--~NPTG~~~~~~~l~~i~~~~~ 219 (280)
...+..+.+++..+.+.|..+|.+.++.+.++......+. ..+. -..+ ..+.+-.++.+|+++|++.|+
T Consensus 28 Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 28 LDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 3344456778888888666667776666554332110000 0010 0111 124456799999999999999
Q ss_pred hCCceeE
Q 023599 220 LKRLLPF 226 (280)
Q Consensus 220 ~~~~~ii 226 (280)
+++|-||
T Consensus 108 ~rgI~VI 114 (445)
T cd06569 108 ARHIEVI 114 (445)
T ss_pred HcCCEEE
Confidence 9998776
No 402
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=72.23 E-value=48 Score=26.37 Aligned_cols=83 Identities=7% Similarity=0.054 Sum_probs=54.1
Q ss_pred hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHH
Q 023599 134 HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQ 213 (280)
Q Consensus 134 ~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~ 213 (280)
...+..|+...|-+..+...+...|+....+=......-.-.+..+|++++......++..+ |+ -++.+++++
T Consensus 57 s~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WL--p~-----~l~~~~lRR 129 (168)
T TIGR00623 57 GQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWL--TD-----ELTEEEHAK 129 (168)
T ss_pred cccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecC--Cc-----cCCHHHHHH
Confidence 34677888888988899999999999765553222222223578889988876553333333 21 267788888
Q ss_pred HHHHHHhCCc
Q 023599 214 IRQLMRLKRL 223 (280)
Q Consensus 214 i~~~~~~~~~ 223 (280)
|--.|+.-+.
T Consensus 130 LqlAA~~G~a 139 (168)
T TIGR00623 130 LVRAAEEGNA 139 (168)
T ss_pred HHHHHHhCCC
Confidence 8766665553
No 403
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=71.74 E-value=3.2 Score=36.94 Aligned_cols=68 Identities=10% Similarity=-0.003 Sum_probs=42.5
Q ss_pred HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 151 PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 151 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
...+..++.+...+.+.|.+.|.+....+.++-..... .++.+ |..++.+|+++|++.|+++|+-||-
T Consensus 24 id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~--------~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 24 IDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAY--------RPSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTE--------STTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HHHHHHcCCcEEEEEEecCCCCccccCCCccccccCcc--------ccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 34445678888888887666666665555443332100 01113 4489999999999999999987663
No 404
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=71.17 E-value=73 Score=28.07 Aligned_cols=36 Identities=17% Similarity=0.367 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCc
Q 023599 197 SGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGF 234 (280)
Q Consensus 197 ~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~ 234 (280)
+-+=|-| ++.+...+|+++|++.+..++.|..-..+
T Consensus 136 sGSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 136 SGSLPPG--VPPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred eCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 3567887 78999999999999999999999877554
No 405
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=70.79 E-value=71 Score=28.52 Aligned_cols=75 Identities=11% Similarity=0.171 Sum_probs=49.7
Q ss_pred CCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCce
Q 023599 145 PTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLL 224 (280)
Q Consensus 145 P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ 224 (280)
-.|+.|+..++.--+++++++..++ ...+-...++. +.| . |+. --|. +++.+|.++|++.|+++++.
T Consensus 59 k~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~-~~K-~--VL~---EKPl--a~n~~e~~~iveaA~~rgv~ 125 (351)
T KOG2741|consen 59 KAYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALN-KGK-H--VLC---EKPL--AMNVAEAEEIVEAAEARGVF 125 (351)
T ss_pred ccccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHH-cCC-c--EEe---cccc--cCCHHHHHHHHHHHHHcCcE
Confidence 3688899999988889999987322 23444444443 323 2 333 3344 48899999999999999955
Q ss_pred eEEcccCCC
Q 023599 225 PFFDCAYQG 233 (280)
Q Consensus 225 ii~De~y~~ 233 (280)
+ .|-.+.-
T Consensus 126 ~-meg~~~R 133 (351)
T KOG2741|consen 126 F-MEGLWWR 133 (351)
T ss_pred E-Eeeeeee
Confidence 4 4444433
No 406
>PLN02565 cysteine synthase
Probab=68.72 E-value=48 Score=29.34 Aligned_cols=46 Identities=13% Similarity=0.119 Sum_probs=30.7
Q ss_pred cccchhHHHHHHHHHHhhcCC--CEEEEeCCCCCChHHHHHHcCCeeeEEE
Q 023599 117 CLSGSGSLRIGADFLAKHYYQ--HTVYLSQPTYGNHPNFFAAAGLAMKTYH 165 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~G--d~Vli~~P~y~~~~~~~~~~G~~~~~v~ 165 (280)
.++|+.++.++ +.+.. .| -.|++|.-.-..-...++.+|++++.++
T Consensus 73 aSsGN~g~alA--~~a~~-~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~ 120 (322)
T PLN02565 73 PTSGNTGIGLA--FMAAA-KGYKLIITMPASMSLERRIILLAFGAELVLTD 120 (322)
T ss_pred ECCChHHHHHH--HHHHH-cCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeC
Confidence 77888888888 44322 44 3455554444455777889999998775
No 407
>PLN03013 cysteine synthase
Probab=68.72 E-value=48 Score=30.68 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=43.7
Q ss_pred cccchhHHHHHHHHHHhhcCC--CEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEE
Q 023599 117 CLSGSGSLRIGADFLAKHYYQ--HTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLL 194 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~G--d~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~ 194 (280)
.++|+.++.++ +.+.. .| -.|++|+-.-..-...++.+|++++.++- ..++.-..+..++...+.+. .++
T Consensus 181 aSSGN~G~ALA--~~a~~-~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~--~~~~~~a~~~A~ela~~~~g---~~~ 252 (429)
T PLN03013 181 PTSGNTGIGLA--FIAAS-RGYRLILTMPASMSMERRVLLKAFGAELVLTDP--AKGMTGAVQKAEEILKNTPD---AYM 252 (429)
T ss_pred ECCcHHHHHHH--HHHHH-cCCCEEEEECCCCcHHHHHHHHHcCCEEEEECC--CCChHHHHHHHHHHHhhcCC---eEe
Confidence 77888888877 44322 33 35555654445557778899999998864 11111113333443333222 455
Q ss_pred ecCCCCCC
Q 023599 195 QASGHNPT 202 (280)
Q Consensus 195 ~~~p~NPT 202 (280)
++..+||-
T Consensus 253 ~~qy~Np~ 260 (429)
T PLN03013 253 LQQFDNPA 260 (429)
T ss_pred CCCCCCHH
Confidence 55556774
No 408
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=67.91 E-value=90 Score=27.86 Aligned_cols=121 Identities=12% Similarity=0.034 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEE--EEeCCCCC------ChHHHHHHcC
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTV--YLSQPTYG------NHPNFFAAAG 158 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~V--li~~P~y~------~~~~~~~~~G 158 (280)
+..+|++.+.++-. .... .-+++ |..+||..+..++. +..-.-|..+ +..++.|. ....+++.+|
T Consensus 41 ~~~~l~~l~~~~k~-~~~~---~yD~i-V~lSGGkDSs~la~--ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lg 113 (343)
T TIGR03573 41 REKELEELVDKIKK-KGGG---RYDCI-IGVSGGKDSTYQAH--VLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLG 113 (343)
T ss_pred HHHHHHHHHHHHHh-cCCC---CCCEE-EECCCCHHHHHHHH--HHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcC
Confidence 44456665555432 2111 02333 45899988887773 2212234333 35566664 2344455688
Q ss_pred CeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccC
Q 023599 159 LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAY 231 (280)
Q Consensus 159 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y 231 (280)
+....+.. +.+.+....... +- +..+|...+. ......+.++|+++|+.+|..-..
T Consensus 114 vd~~~i~~--------d~~~~~~l~~~~-----~~---~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~ 169 (343)
T TIGR03573 114 FDLHTITI--------NPETFRKLQRAY-----FK---KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGEN 169 (343)
T ss_pred CCeEEEeC--------CHHHHHHHHHHH-----Hh---ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCC
Confidence 87777665 344444333221 00 1233433322 334677889999999987765443
No 409
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=67.79 E-value=27 Score=30.67 Aligned_cols=134 Identities=14% Similarity=0.043 Sum_probs=89.9
Q ss_pred CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCC---CEEEEeCCCCCC----hHHHHHHc
Q 023599 85 ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQ---HTVYLSQPTYGN----HPNFFAAA 157 (280)
Q Consensus 85 ~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~G---d~Vli~~P~y~~----~~~~~~~~ 157 (280)
..+.+.....++.... ..+++|.+ .++-+--+..+ +.++.+|. -+|+++.-.|+. +.+.++..
T Consensus 110 ~~~De~il~l~~~iVG------A~e~Evav--mNsLTvNlh~L--l~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lh 179 (465)
T KOG3846|consen 110 VSIDEPILPLLAPIVG------AQENEVAV--MNSLTVNLHSL--LISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLH 179 (465)
T ss_pred eecchhhhhhhhhhcc------CCchhhhh--HhhhhhHHHHH--HHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhc
Confidence 4455555555555532 23477777 77777777777 77777775 368888766643 46667778
Q ss_pred CCeeeE--EEeec-CCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccC
Q 023599 158 GLAMKT--YHYYD-PKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAY 231 (280)
Q Consensus 158 G~~~~~--v~~~~-~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y 231 (280)
|+.+.. +-+.. +....+..+++.+.+..+....++++.+--+.-||+.++. .+|...-+..|+++=.|-++
T Consensus 180 G~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi---~aIT~Agq~kgc~VGfDLAH 253 (465)
T KOG3846|consen 180 GISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDI---GAITFAGQFKGCLVGFDLAH 253 (465)
T ss_pred CCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccch---hhhhhcccCCCcEechhhhh
Confidence 876532 22211 2224577888999998887767788888899999999864 45554445567888777766
No 410
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=67.26 E-value=8.5 Score=37.18 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=32.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 198 GHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 198 p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
|++.-| ++++++++++-|.++||-||.|-+|..|..+
T Consensus 206 p~sryG---tPedfk~fVD~aH~~GIgViLD~V~~HF~~d 242 (628)
T COG0296 206 PTSRYG---TPEDFKALVDAAHQAGIGVILDWVPNHFPPD 242 (628)
T ss_pred ccccCC---CHHHHHHHHHHHHHcCCEEEEEecCCcCCCC
Confidence 444444 7999999999999999999999999998764
No 411
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=66.94 E-value=48 Score=29.98 Aligned_cols=79 Identities=16% Similarity=0.137 Sum_probs=44.5
Q ss_pred cccchhHHHHHHHHHHhhcCC--CEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEE
Q 023599 117 CLSGSGSLRIGADFLAKHYYQ--HTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLL 194 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~G--d~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~ 194 (280)
.++|+.++.++ +.+. ..| -.|+++.-.-..-...++.+|++++.++- ..+..-..+..++..++.+. .++
T Consensus 117 aSsGN~G~alA--~~a~-~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~--~~~~~~~~~~a~~l~~~~~~---~~~ 188 (368)
T PLN02556 117 PTSGNMGISLA--FMAA-MKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP--TKGMGGTVKKAYELLESTPD---AFM 188 (368)
T ss_pred eCCchHHHHHH--HHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CCCccHHHHHHHHHHHhcCC---CCc
Confidence 77888888887 4432 234 35555544344456777899999998763 11111234444444444333 455
Q ss_pred ecCCCCCCC
Q 023599 195 QASGHNPTG 203 (280)
Q Consensus 195 ~~~p~NPTG 203 (280)
++..+||-+
T Consensus 189 ~~q~~np~~ 197 (368)
T PLN02556 189 LQQFSNPAN 197 (368)
T ss_pred cCCCCCHHH
Confidence 554567753
No 412
>PLN02970 serine racemase
Probab=66.29 E-value=38 Score=29.96 Aligned_cols=53 Identities=11% Similarity=0.001 Sum_probs=35.1
Q ss_pred CCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
..|+. .++|+.++.++ +.+ ...-.-.|+++......-...++.+|++++.++-
T Consensus 76 ~~vv~--aSsGN~g~alA--~~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 76 KGVVT--HSSGNHAAALA--LAAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred CeEEE--ECCcHHHHHHH--HHHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 34554 78888888887 443 2223346777765555556677889999988764
No 413
>PRK08246 threonine dehydratase; Provisional
Probab=65.61 E-value=92 Score=27.29 Aligned_cols=73 Identities=15% Similarity=0.114 Sum_probs=44.4
Q ss_pred CCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEE
Q 023599 86 TGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTY 164 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v 164 (280)
.|.-..|-++........ ....|+. .++|+.++.++ +.+ .+.-.-.|+++...-..-...++.+|++++.+
T Consensus 49 tGS~K~R~a~~~~~~~~~----~~~~vv~--aSsGN~g~a~A--~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~ 120 (310)
T PRK08246 49 TGSFKARGAFNRLLAAPV----PAAGVVA--ASGGNAGLAVA--YAAAALGVPATVFVPETAPPAKVARLRALGAEVVVV 120 (310)
T ss_pred CCCCHHHHHHHHHHhhcc----cCCeEEE--eCCCHHHHHHH--HHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEe
Confidence 455556666654433222 1244554 78888888887 433 33333567777655455567788999999877
Q ss_pred Ee
Q 023599 165 HY 166 (280)
Q Consensus 165 ~~ 166 (280)
+-
T Consensus 121 ~~ 122 (310)
T PRK08246 121 GA 122 (310)
T ss_pred CC
Confidence 53
No 414
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=65.52 E-value=45 Score=23.53 Aligned_cols=69 Identities=4% Similarity=-0.011 Sum_probs=44.6
Q ss_pred CCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeE
Q 023599 147 YGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPF 226 (280)
Q Consensus 147 y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii 226 (280)
...|...++.+|++.... . ...+..-....|+..+.+. + .+|++++. .+..-...+-+.|+++++.++
T Consensus 12 ~~~~~~~~~~~G~~~~~h-g-~~~~~~~~~~~l~~~i~~a-D--~VIv~t~~-------vsH~~~~~vk~~akk~~ip~~ 79 (97)
T PF10087_consen 12 ERRYKRILEKYGGKLIHH-G-RDGGDEKKASRLPSKIKKA-D--LVIVFTDY-------VSHNAMWKVKKAAKKYGIPII 79 (97)
T ss_pred HHHHHHHHHHcCCEEEEE-e-cCCCCccchhHHHHhcCCC-C--EEEEEeCC-------cChHHHHHHHHHHHHcCCcEE
Confidence 356788888999998888 3 2222222333477766532 2 34444333 577788999999999998765
Q ss_pred E
Q 023599 227 F 227 (280)
Q Consensus 227 ~ 227 (280)
.
T Consensus 80 ~ 80 (97)
T PF10087_consen 80 Y 80 (97)
T ss_pred E
Confidence 4
No 415
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=65.43 E-value=28 Score=22.84 Aligned_cols=23 Identities=9% Similarity=0.069 Sum_probs=18.6
Q ss_pred CC-HHHHHHHHHHHHhCCceeEEc
Q 023599 206 PT-AQQWEQIRQLMRLKRLLPFFD 228 (280)
Q Consensus 206 ~~-~~~l~~i~~~~~~~~~~ii~D 228 (280)
++ .+++++|.+|+++=|.++|.|
T Consensus 47 ~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 47 LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CCchHHHHHHHHHHHcCCEEEEeC
Confidence 44 589999999999878777765
No 416
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=64.43 E-value=49 Score=28.73 Aligned_cols=25 Identities=16% Similarity=0.223 Sum_probs=16.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCceeEEcc
Q 023599 202 TGIDPTAQQWEQIRQLMRLKRLLPFFDC 229 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~~~~~ii~De 229 (280)
||..++.+.+++|++ ..++.-|=|.
T Consensus 140 tg~~l~~~~i~~L~~---~pnv~giK~s 164 (290)
T TIGR00683 140 TGVNMGIEQFGELYK---NPKVLGVKFT 164 (290)
T ss_pred cccCcCHHHHHHHhc---CCCEEEEEeC
Confidence 788888887766653 2456655564
No 417
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=63.36 E-value=78 Score=26.14 Aligned_cols=117 Identities=17% Similarity=0.206 Sum_probs=64.3
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC-hHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN-HPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPS 188 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~-~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~ 188 (280)
..+++ ..||..|..=+ ..++..|..|.+..|.... .....+..++.... . ..+.+.+..
T Consensus 13 k~Vlv--vGgG~va~rKa---~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~------~--~~~~~~~~~------- 72 (210)
T COG1648 13 KKVLV--VGGGSVALRKA---RLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE------R--EFDAEDLDD------- 72 (210)
T ss_pred CEEEE--ECCCHHHHHHH---HHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh------c--ccChhhhcC-------
Confidence 45666 88888877765 4567899999999999932 33333333322211 1 123332222
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCcee-EEc-ccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccc
Q 023599 189 GAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLP-FFD-CAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKT 264 (280)
Q Consensus 189 ~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~i-i~D-e~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 264 (280)
..+++.+.. +.+.=+++.+.|+++++++ ++| -.+++|.+. +..+.++-+|-+.|=.|.
T Consensus 73 -~~lviaAt~--------d~~ln~~i~~~a~~~~i~vNv~D~p~~~~f~~P---------a~~~r~~l~iaIsT~G~s 132 (210)
T COG1648 73 -AFLVIAATD--------DEELNERIAKAARERRILVNVVDDPELCDFIFP---------AIVDRGPLQIAISTGGKS 132 (210)
T ss_pred -ceEEEEeCC--------CHHHHHHHHHHHHHhCCceeccCCcccCceecc---------eeeccCCeEEEEECCCCC
Confidence 225555432 2345578999999988544 233 333455542 223444556666665543
No 418
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=63.24 E-value=61 Score=28.00 Aligned_cols=124 Identities=10% Similarity=0.135 Sum_probs=75.8
Q ss_pred ecccchhHHHHHHHHHHhhcCC--------CEEEEeCCC---CCChHHHHHH----cCCee-eEEEeecCCCCCcCHHHH
Q 023599 116 QCLSGSGSLRIGADFLAKHYYQ--------HTVYLSQPT---YGNHPNFFAA----AGLAM-KTYHYYDPKTNGLDFQGM 179 (280)
Q Consensus 116 ~t~g~~~al~~~~~~~~~~~~G--------d~Vli~~P~---y~~~~~~~~~----~G~~~-~~v~~~~~~~~~~d~~~l 179 (280)
.|-=.+.++..+....-....| |.|++-+-- .+.....++. .+... ++|.. -+++++
T Consensus 129 ~TRKT~PglR~leKyAV~~GGG~nHR~gLsDavliKDNHia~~g~i~~Av~~aR~~~~~~~kIEVEv-------esle~~ 201 (280)
T COG0157 129 DTRKTTPGLRLLEKYAVRAGGGDNHRFGLSDAVLIKDNHIAAAGSITEAVRRARAAAPFTKKIEVEV-------ESLEEA 201 (280)
T ss_pred eccCCCccHHHHHHHHHHhcCCccccCCCcceEEehhhHHHHhccHHHHHHHHHHhCCCCceEEEEc-------CCHHHH
Confidence 3777777777774333223232 778877631 1223333332 23222 45554 258999
Q ss_pred HHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEe
Q 023599 180 LQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQ 259 (280)
Q Consensus 180 ~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 259 (280)
++++....+ ++++-| |+++++++.++++..++-.+++ +-+.. ....+..+...+.++|.++
T Consensus 202 ~eAl~agaD---iImLDN--------m~~e~~~~av~~l~~~~~~~lE--aSGgI------t~~ni~~yA~tGVD~IS~g 262 (280)
T COG0157 202 EEALEAGAD---IIMLDN--------MSPEELKEAVKLLGLAGRALLE--ASGGI------TLENIREYAETGVDVISVG 262 (280)
T ss_pred HHHHHcCCC---EEEecC--------CCHHHHHHHHHHhccCCceEEE--EeCCC------CHHHHHHHhhcCCCEEEeC
Confidence 999987766 788866 6799999999997555533332 22222 3344577777778999999
Q ss_pred cccccc
Q 023599 260 SYSKTM 265 (280)
Q Consensus 260 S~SK~~ 265 (280)
.+++..
T Consensus 263 alths~ 268 (280)
T COG0157 263 ALTHSA 268 (280)
T ss_pred ccccCC
Confidence 998764
No 419
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=60.95 E-value=99 Score=25.92 Aligned_cols=85 Identities=15% Similarity=0.143 Sum_probs=56.9
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSG 189 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~ 189 (280)
.-|++ |.+++++|-.+. ..-+.+.|-.|+...-.-.+..+.....|+++...+..+++ .+..++..+..++..
T Consensus 8 k~VlI--tgcs~GGIG~al-a~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~----~V~~v~~evr~~~~G 80 (289)
T KOG1209|consen 8 KKVLI--TGCSSGGIGYAL-AKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPE----EVVTVSGEVRANPDG 80 (289)
T ss_pred CeEEE--eecCCcchhHHH-HHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChH----HHHHHHHHHhhCCCC
Confidence 44555 888888888772 23456689889888878887888887899888888873332 345555556655555
Q ss_pred cEEEEecCCCCC
Q 023599 190 AIVLLQASGHNP 201 (280)
Q Consensus 190 ~~~v~~~~p~NP 201 (280)
+.=++++|..-|
T Consensus 81 kld~L~NNAG~~ 92 (289)
T KOG1209|consen 81 KLDLLYNNAGQS 92 (289)
T ss_pred ceEEEEcCCCCC
Confidence 555555554433
No 420
>PRK08638 threonine dehydratase; Validated
Probab=60.82 E-value=48 Score=29.49 Aligned_cols=51 Identities=10% Similarity=0.054 Sum_probs=33.0
Q ss_pred CeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEE
Q 023599 111 RVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYH 165 (280)
Q Consensus 111 ~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~ 165 (280)
.|+. +++|+.++.++ +.+ ...-.-.|++|+-....-...++.+|++++.++
T Consensus 77 ~vv~--~SsGN~g~alA--~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 77 GVVA--CSAGNHAQGVA--LSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred eEEE--eCCcHHHHHHH--HHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 3444 77788888877 443 222224666665544455667889999998775
No 421
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=60.59 E-value=62 Score=28.05 Aligned_cols=52 Identities=15% Similarity=0.189 Sum_probs=31.5
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCC--CEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQ--HTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~G--d~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
..|+. +++|+.+..++ ..+. ..| -.|+++.-....-...++.+|++++.++.
T Consensus 66 ~~iv~--~ssGN~g~alA--~~a~-~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 66 KGVVA--ASAGNHAQGVA--YAAK-LLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred CcEEE--ECCCHHHHHHH--HHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34554 77778877777 3332 234 34555443333356667889999988875
No 422
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=60.44 E-value=1.4e+02 Score=27.96 Aligned_cols=105 Identities=10% Similarity=0.083 Sum_probs=66.5
Q ss_pred ccCCCeEEeecccchhHHHHHHHHHHhhcCC--CEEEEeC--CCCCCh--HHHHHHcCCeeeEEEeecCCCCCcCHHHHH
Q 023599 107 IKENRVSTVQCLSGSGSLRIGADFLAKHYYQ--HTVYLSQ--PTYGNH--PNFFAAAGLAMKTYHYYDPKTNGLDFQGML 180 (280)
Q Consensus 107 ~~~~~i~~v~t~g~~~al~~~~~~~~~~~~G--d~Vli~~--P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 180 (280)
+....+++ |-|.+..++.+ ++--...| -+|+|.+ |.+.+- ...+...|+...|+-+ +. ++. +
T Consensus 357 I~dgdvil--tyg~s~vV~~i--ll~A~~~~k~frVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I-~a----~sy--i- 424 (556)
T KOG1467|consen 357 IQDGDVLL--TYGSSSVVNMI--LLEAKELGKKFRVVVVDSRPNLEGRKLLRRLVDRGINCTYVLI-NA----ASY--I- 424 (556)
T ss_pred hhcCCEEE--EecchHHHHHH--HHHHHHhCcceEEEEEeCCCCcchHHHHHHHHHcCCCeEEEEe-hh----HHH--H-
Confidence 45677777 99999988888 55433333 3555554 666543 3345567988888877 21 222 1
Q ss_pred HHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEc
Q 023599 181 QDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFD 228 (280)
Q Consensus 181 ~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~D 228 (280)
+.+-++ +++-++.----|.++++.-=..++=.++.+|+.||+=
T Consensus 425 --m~evtk---vfLGahailsNG~vysR~GTa~valvAna~nVPVlVC 467 (556)
T KOG1467|consen 425 --MLEVTK---VFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVC 467 (556)
T ss_pred --HHhcce---eeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEE
Confidence 222333 5555555455688999887777777888899876653
No 423
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=60.38 E-value=45 Score=24.98 Aligned_cols=59 Identities=10% Similarity=0.171 Sum_probs=43.2
Q ss_pred CeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCC---CCCCCCCCCHHHHHHHHHHHHhCC
Q 023599 159 LAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASG---HNPTGIDPTAQQWEQIRQLMRLKR 222 (280)
Q Consensus 159 ~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p---~NPTG~~~~~~~l~~i~~~~~~~~ 222 (280)
.+++.+|+ ...+|++.+.+++.+.. +.++|.-|.| |...|......+++.+-++..+.|
T Consensus 29 vriIrvpC----~Grv~~~~il~Af~~GA-DGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 29 VRIIRVPC----SGRVDPEFILRAFEKGA-DGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred eEEEEccC----CCccCHHHHHHHHHcCC-CEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 45666666 45799999999998763 3445545544 558998888888888888888765
No 424
>PRK10595 SOS cell division inhibitor; Provisional
Probab=60.31 E-value=84 Score=24.89 Aligned_cols=84 Identities=8% Similarity=0.037 Sum_probs=53.2
Q ss_pred hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHH
Q 023599 133 KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWE 212 (280)
Q Consensus 133 ~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~ 212 (280)
+...+..|+...|-+..+...+...|+....+=.....+..-.+..+|++++......++..+ |+ -++.++++
T Consensus 52 l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wl--p~-----~l~~~~~R 124 (164)
T PRK10595 52 LGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWL--PD-----ELTEEEHA 124 (164)
T ss_pred HhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECC--cc-----cCCHHHHH
Confidence 334677899999999999999999998654443222222122467788888766443222222 21 25678888
Q ss_pred HHHHHHHhCCc
Q 023599 213 QIRQLMRLKRL 223 (280)
Q Consensus 213 ~i~~~~~~~~~ 223 (280)
+|--.|++-+.
T Consensus 125 RLQlAAe~g~~ 135 (164)
T PRK10595 125 RLVDAAQEGNA 135 (164)
T ss_pred HHHHHHHhCCC
Confidence 88766666554
No 425
>PRK04296 thymidine kinase; Provisional
Probab=58.73 E-value=94 Score=24.95 Aligned_cols=91 Identities=9% Similarity=-0.001 Sum_probs=50.4
Q ss_pred hhcCCCEEEEeCCCCCC---hHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHH
Q 023599 133 KHYYQHTVYLSQPTYGN---HPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQ 209 (280)
Q Consensus 133 ~~~~Gd~Vli~~P~y~~---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~ 209 (280)
....|.+|++..|.+.. ....+...|..+..+.. ...+.+.+.+.+...+..+|++-.- ..++.+
T Consensus 26 ~~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEa-----q~l~~~ 93 (190)
T PRK04296 26 YEERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEA-----QFLDKE 93 (190)
T ss_pred HHHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEcc-----ccCCHH
Confidence 34568888888775432 23344455644433322 1223333333221112226666555 346778
Q ss_pred HHHHHHHHHHhCCceeEEcccCCCcc
Q 023599 210 QWEQIRQLMRLKRLLPFFDCAYQGFV 235 (280)
Q Consensus 210 ~l~~i~~~~~~~~~~ii~De~y~~~~ 235 (280)
++.++++.++..++.+|.=.-..+|.
T Consensus 94 ~v~~l~~~l~~~g~~vi~tgl~~~~~ 119 (190)
T PRK04296 94 QVVQLAEVLDDLGIPVICYGLDTDFR 119 (190)
T ss_pred HHHHHHHHHHHcCCeEEEEecCcccc
Confidence 88899999888998777755554543
No 426
>PRK07476 eutB threonine dehydratase; Provisional
Probab=57.89 E-value=1.3e+02 Score=26.41 Aligned_cols=51 Identities=18% Similarity=0.181 Sum_probs=32.7
Q ss_pred eEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 112 VSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 112 i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
|+. .++|+.+..++ +.+ .+.---.|+++...-..-...++.+|++++.++-
T Consensus 70 vv~--aSsGN~g~alA--~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~ 121 (322)
T PRK07476 70 VVT--ASTGNHGRALA--YAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGR 121 (322)
T ss_pred EEE--ECCChHHHHHH--HHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 554 78888888877 433 2222235555554444456778899999988864
No 427
>PRK06815 hypothetical protein; Provisional
Probab=56.30 E-value=1e+02 Score=27.03 Aligned_cols=52 Identities=21% Similarity=0.169 Sum_probs=33.0
Q ss_pred CeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 111 RVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 111 ~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
.++. .++|+.+..++ +.+ .+.-.-.|+++...-..-...++.+|++++.++-
T Consensus 70 ~vv~--aSsGN~g~alA--~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (317)
T PRK06815 70 GVIT--ASSGNHGQGVA--LAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGG 122 (317)
T ss_pred eEEE--ECCChHHHHHH--HHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 3444 77777777776 333 2232346666655444456677889999998874
No 428
>PRK05638 threonine synthase; Validated
Probab=55.66 E-value=1.4e+02 Score=27.70 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=32.2
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
..|+. .++|+.+..+++ +.+...-.-.|++|.-.-..-...++.+|++++.++-
T Consensus 113 ~~vv~--aSsGN~g~alA~-~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~ 166 (442)
T PRK05638 113 NGFIV--ASDGNAAASVAA-YSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGE 166 (442)
T ss_pred CEEEE--eCCChHHHHHHH-HHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECC
Confidence 44554 777777777772 2222222245666553333446667789999998863
No 429
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=54.08 E-value=70 Score=28.04 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=48.9
Q ss_pred hhcCCCEEEEeC---CCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHH
Q 023599 133 KHYYQHTVYLSQ---PTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQ 209 (280)
Q Consensus 133 ~~~~Gd~Vli~~---P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~ 209 (280)
+.+-|..|++|- +.+..+..+...+| ++.+.+. +. .|.|.++++++.. + +++-+.--.-+|+. ++-+
T Consensus 81 lak~GSQviiPyR~d~~~~r~lkvmGdLG-Qvl~~~f-d~----~DedSIr~vvk~s-N--VVINLIGrd~eTkn-f~f~ 150 (391)
T KOG2865|consen 81 LAKMGSQVIIPYRGDEYDPRHLKVMGDLG-QVLFMKF-DL----RDEDSIRAVVKHS-N--VVINLIGRDYETKN-FSFE 150 (391)
T ss_pred HhhcCCeEEEeccCCccchhheeeccccc-ceeeecc-CC----CCHHHHHHHHHhC-c--EEEEeeccccccCC-cccc
Confidence 345789999994 44444444444444 6777766 33 4889999998754 2 12222223456654 2333
Q ss_pred H-----HHHHHHHHHhCCc
Q 023599 210 Q-----WEQIRQLMRLKRL 223 (280)
Q Consensus 210 ~-----l~~i~~~~~~~~~ 223 (280)
+ -++|+.+|++-|+
T Consensus 151 Dvn~~~aerlAricke~GV 169 (391)
T KOG2865|consen 151 DVNVHIAERLARICKEAGV 169 (391)
T ss_pred cccchHHHHHHHHHHhhCh
Confidence 3 3788999998775
No 430
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=53.94 E-value=68 Score=28.82 Aligned_cols=195 Identities=12% Similarity=0.048 Sum_probs=88.2
Q ss_pred CCeeEeecceeecCCCCccchHHHHHHHHHHhccCC-------CCCCCCCCCCCH---HHHHHHHHHHhCCCCccccCCC
Q 023599 42 PMKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLS-------ADKEYLPITGLP---EFNKLSAKLIFGADSPAIKENR 111 (280)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~y~~~~G~~---~lr~~ia~~l~~~~~~~~~~~~ 111 (280)
+.+.||+.|-. ..+++.++++.+++.+-.+ ..|+ ...+.. +.++.+.+.+.-.+ ..+
T Consensus 4 ~~~~nFsaGPa------~lp~~vL~~a~~e~~~~~g~g~svme~SHR--sk~~~~v~~~a~~~lreLl~iPd-----~Y~ 70 (365)
T COG1932 4 PRVYNFSAGPA------ALPPEVLQQAQKELLDWNGLGMSVMEISHR--SKEFKNVLEEAEKDLRELLNIPD-----DYK 70 (365)
T ss_pred CCCCCCCCCcc------cCCHHHHHHHHHHHhhhccCCcceeeeccc--cHHHHHHHHHHHHHHHHHhCCCC-----Cce
Confidence 45678887752 2566677777777653222 1111 111222 22333333332111 234
Q ss_pred eEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCCh-HHHHHHcCC--eeeEEEeecCCC--CCcCHHHHHHHHhcC
Q 023599 112 VSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNH-PNFFAAAGL--AMKTYHYYDPKT--NGLDFQGMLQDLGAA 186 (280)
Q Consensus 112 i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~-~~~~~~~G~--~~~~v~~~~~~~--~~~d~~~l~~~~~~~ 186 (280)
|++ .-.|+++...++ ..+++.....-.+-.-.|... ...++.++- ++..... ...+ .-++++... +.
T Consensus 71 Vlf-lqGGat~qf~~~--p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~-~~~~~~~iP~~~~~~--~~-- 142 (365)
T COG1932 71 VLF-LQGGATGQFAMA--PMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARI-EEAGYGSIPDLSKWD--FS-- 142 (365)
T ss_pred EEE-EcCccHHHHHHH--HHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccce-eccCccCCCChhhcc--cC--
Confidence 554 366678888888 777776543212333344333 222334443 2222222 1111 223333222 11
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEeccccccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSYSKTMG 266 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 266 (280)
++...|..|.-..-+|+-++ +... +. .+.++|.|-+-.-+..+- +-..-=++..|.=|.+|
T Consensus 143 -~~~ayv~~~~NeTi~Gv~v~--~~p~---~~--~~~~~v~D~SS~ilsr~i-----------Dvsk~dviyagaQKnlG 203 (365)
T COG1932 143 -DNDAYVHFCWNETISGVEVP--ELPD---IG--SDGLLVADASSAILSRPI-----------DVSKYDVIYAGAQKNLG 203 (365)
T ss_pred -CCccEEEEecCCcccceEcc--CCCC---CC--CCceEEEecccHHhcCCC-----------ChhHcceEEEehhhccC
Confidence 11223444322223344333 1111 11 126788887654443321 11112255788999999
Q ss_pred ccccccceEEEE
Q 023599 267 LYGERVGALSVV 278 (280)
Q Consensus 267 ~~G~RvG~~v~~ 278 (280)
..| ++.+|+.
T Consensus 204 paG--ltvvIvr 213 (365)
T COG1932 204 PAG--LTVVIVR 213 (365)
T ss_pred ccc--eEEEEEc
Confidence 888 7777664
No 431
>PRK08329 threonine synthase; Validated
Probab=53.40 E-value=1.4e+02 Score=26.58 Aligned_cols=53 Identities=15% Similarity=0.189 Sum_probs=32.4
Q ss_pred CCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
..|+. .++|+.+..++ ..+ ...-.-.|++|.-.-..-...++.+|++++.++-
T Consensus 105 ~~vv~--aSsGN~g~alA--~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~ 158 (347)
T PRK08329 105 NEVVI--DSSGNAALSLA--LYSLSEGIKVHVFVSYNASKEKISLLSRLGAELHFVEG 158 (347)
T ss_pred CEEEE--ECCCcHHHHHH--HHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 44554 66777777777 333 2222245666554334456667789999998874
No 432
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=52.02 E-value=16 Score=32.33 Aligned_cols=26 Identities=4% Similarity=-0.003 Sum_probs=22.8
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCceeE
Q 023599 201 PTGIDPTAQQWEQIRQLMRLKRLLPF 226 (280)
Q Consensus 201 PTG~~~~~~~l~~i~~~~~~~~~~ii 226 (280)
+.+-.++.+|+++|++.|+++|+-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45667999999999999999998776
No 433
>PRK07048 serine/threonine dehydratase; Validated
Probab=51.88 E-value=96 Score=27.27 Aligned_cols=53 Identities=21% Similarity=0.097 Sum_probs=33.1
Q ss_pred CCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
..|+. .++|+.+..++ +.+ .+.---.|+++......-...++.+|++++.++-
T Consensus 73 ~~vv~--aSsGN~g~alA--~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~ 126 (321)
T PRK07048 73 AGVVT--FSSGNHAQAIA--LSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDR 126 (321)
T ss_pred CcEEE--eCCCHHHHHHH--HHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 34544 67778887777 333 2222245666655444455667789999998874
No 434
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=51.51 E-value=1.7e+02 Score=25.67 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=69.0
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH---HHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF---FAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 186 (280)
.++++ .|.||++-=..+ .+.+.+.|-++++-+-.-.+..+. ++..| ++..+-+ |-. ..-++..+.+.+.+.
T Consensus 38 g~~vL-ITGgg~GlGr~i--alefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~c-dis-~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 38 GEIVL-ITGGGSGLGRLI--ALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTC-DIS-DREEIYRLAKKVKKE 111 (300)
T ss_pred CCEEE-EeCCCchHHHHH--HHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEe-cCC-CHHHHHHHHHHHHHh
Confidence 44554 155555544444 455667787776666544444333 33445 6666655 211 112455555555554
Q ss_pred CCCcEEEEecCCC---CCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhh-----cCCeEEEE
Q 023599 187 PSGAIVLLQASGH---NPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVA-----DGGECLVA 258 (280)
Q Consensus 187 ~~~~~~v~~~~p~---NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-----~~~~~i~~ 258 (280)
-. .+-+++||.. .-...-.+.+++++..++--- + ..+..+.+.+ ...+++.+
T Consensus 112 ~G-~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~-----------~--------~f~t~kaFLP~M~~~~~GHIV~I 171 (300)
T KOG1201|consen 112 VG-DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI-----------A--------HFWTTKAFLPKMLENNNGHIVTI 171 (300)
T ss_pred cC-CceEEEeccccccCCCccCCCHHHHHHHHHHhhH-----------H--------HHHHHHHHhHHHHhcCCceEEEe
Confidence 22 3345555532 222334677777776654221 0 1112222222 34589999
Q ss_pred eccccccccccc
Q 023599 259 QSYSKTMGLYGE 270 (280)
Q Consensus 259 ~S~SK~~~~~G~ 270 (280)
.|.--.+|.+|+
T Consensus 172 aS~aG~~g~~gl 183 (300)
T KOG1201|consen 172 ASVAGLFGPAGL 183 (300)
T ss_pred hhhhcccCCccc
Confidence 998877777764
No 435
>PLN00011 cysteine synthase
Probab=51.10 E-value=1.4e+02 Score=26.30 Aligned_cols=48 Identities=8% Similarity=0.137 Sum_probs=32.2
Q ss_pred cccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 117 CLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 117 t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
.++|+.++.++ ..+ .+.---.|++|...-..-...++.+|++++.++-
T Consensus 75 aSsGN~g~alA--~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 75 ATAGNTGIGLA--CIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred eCCChHHHHHH--HHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 88888888877 443 2222245666655545567778899999988763
No 436
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=50.95 E-value=79 Score=22.76 Aligned_cols=69 Identities=13% Similarity=0.084 Sum_probs=35.1
Q ss_pred CCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCcee
Q 023599 146 TYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLP 225 (280)
Q Consensus 146 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~i 225 (280)
.|..+..++.....+++.+... . ....+...++++.. + -+++.-| . ..+.++.++|.+.+++++..+
T Consensus 50 ~~~~~~~ll~~~~~D~V~I~tp-~---~~h~~~~~~~l~~g-~---~v~~EKP---~--~~~~~~~~~l~~~a~~~~~~~ 116 (120)
T PF01408_consen 50 VYTDLEELLADEDVDAVIIATP-P---SSHAEIAKKALEAG-K---HVLVEKP---L--ALTLEEAEELVEAAKEKGVKV 116 (120)
T ss_dssp EESSHHHHHHHTTESEEEEESS-G---GGHHHHHHHHHHTT-S---EEEEESS---S--SSSHHHHHHHHHHHHHHTSCE
T ss_pred chhHHHHHHHhhcCCEEEEecC-C---cchHHHHHHHHHcC-C---EEEEEcC---C--cCCHHHHHHHHHHHHHhCCEE
Confidence 3444555555445555555441 1 12345555555433 2 2333333 2 246777777777777777665
Q ss_pred EE
Q 023599 226 FF 227 (280)
Q Consensus 226 i~ 227 (280)
.+
T Consensus 117 ~V 118 (120)
T PF01408_consen 117 MV 118 (120)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 437
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=50.51 E-value=1.6e+02 Score=25.27 Aligned_cols=16 Identities=13% Similarity=0.218 Sum_probs=11.5
Q ss_pred hcCC-CEEEEeCCCCCC
Q 023599 134 HYYQ-HTVYLSQPTYGN 149 (280)
Q Consensus 134 ~~~G-d~Vli~~P~y~~ 149 (280)
-..| |.|++..|.|..
T Consensus 90 ~~~Gad~v~v~pP~y~~ 106 (285)
T TIGR00674 90 EDVGADGFLVVTPYYNK 106 (285)
T ss_pred HHcCCCEEEEcCCcCCC
Confidence 3455 888888888753
No 438
>smart00642 Aamy Alpha-amylase domain.
Probab=50.19 E-value=24 Score=27.94 Aligned_cols=28 Identities=7% Similarity=0.179 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHhCCceeEEcccCCCc
Q 023599 207 TAQQWEQIRQLMRLKRLLPFFDCAYQGF 234 (280)
Q Consensus 207 ~~~~l~~i~~~~~~~~~~ii~De~y~~~ 234 (280)
+.++++++++-|+++|+-||.|-+....
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 4689999999999999999999987554
No 439
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=49.54 E-value=96 Score=26.75 Aligned_cols=48 Identities=13% Similarity=0.196 Sum_probs=30.8
Q ss_pred cccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 117 CLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 117 t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
.++|+.+..++ ..+ .+.---.|+++.-.-..-...++.+|++++.++-
T Consensus 59 ~SsGN~g~alA--~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~ 107 (291)
T cd01561 59 PTSGNTGIGLA--MVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPE 107 (291)
T ss_pred eCCChHHHHHH--HHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 77788887777 333 2222245555554344456777889999998875
No 440
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=48.48 E-value=1.3e+02 Score=25.75 Aligned_cols=98 Identities=14% Similarity=0.121 Sum_probs=57.1
Q ss_pred eecccchhHHHHHHHHHHhhcCCCEEEE-e--CCCCCC-----hHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC
Q 023599 115 VQCLSGSGSLRIGADFLAKHYYQHTVYL-S--QPTYGN-----HPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA 186 (280)
Q Consensus 115 v~t~g~~~al~~~~~~~~~~~~Gd~Vli-~--~P~y~~-----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~ 186 (280)
|+.+||..+..++ .++.-..|+.|+. . .|..+. ....++..|++...+++ +. +++ .+..+
T Consensus 22 vAfSGGvDSslLa--~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~-~~----~~~-----~~~~n 89 (269)
T COG1606 22 VAFSGGVDSSLLA--KLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKM-NR----MDP-----EFKEN 89 (269)
T ss_pred EEecCCccHHHHH--HHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeeh-hh----cch-----hhccC
Confidence 4689998888777 5555556664432 2 333332 24456678888888877 22 221 11222
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 187 PSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 187 ~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
+.+...+| -..-...|.+.+.++|.-++.|-+...=.+
T Consensus 90 ~~~rCY~C------------K~~v~~~l~~~a~~~Gyd~V~dGtNasDl~ 127 (269)
T COG1606 90 PENRCYLC------------KRAVYSTLVEEAEKRGYDVVADGTNASDLF 127 (269)
T ss_pred CCCcchHH------------HHHHHHHHHHHHHHcCCCEEEeCCcHHHhc
Confidence 22222222 233456788899999999999988744333
No 441
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=47.23 E-value=2e+02 Score=25.42 Aligned_cols=147 Identities=12% Similarity=0.069 Sum_probs=74.9
Q ss_pred cchHHHHHHHHHHhccCCC---CCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcC
Q 023599 60 LLLNAVRQAEQLLVNDLSA---DKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYY 136 (280)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~---~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~ 136 (280)
...++.+...+.+.. .+. ...|....|.......+++.+.+.. ..+++ +.++..|--++ .+. .
T Consensus 43 aLd~~~~G~~~aLk~-~G~~n~~i~~~na~~~~~~a~~iarql~~~~------~dviv--~i~tp~Aq~~~---s~~--~ 108 (322)
T COG2984 43 ALDAAREGVKEALKD-AGYKNVKIDYQNAQGDLGTAAQIARQLVGDK------PDVIV--AIATPAAQALV---SAT--K 108 (322)
T ss_pred hHHHHHHHHHHHHHh-cCccCeEEEeecCCCChHHHHHHHHHhhcCC------CcEEE--ecCCHHHHHHH---Hhc--C
Confidence 444444444444442 333 4557788899988888998876553 34443 55544443333 111 1
Q ss_pred CCEEEEeC---CCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC-CCCcEEEEecCCCCCCCCCCCHHHHH
Q 023599 137 QHTVYLSQ---PTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA-PSGAIVLLQASGHNPTGIDPTAQQWE 212 (280)
Q Consensus 137 Gd~Vli~~---P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~~~~~~l~ 212 (280)
+--|++.. |--......++.-|..+..+. ...+.++-.++++.- +.-+.+-++.||+-+- +...++
T Consensus 109 ~iPVV~aavtd~v~a~Lv~~~~~pg~NvTGvs------D~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~n----s~~l~e 178 (322)
T COG2984 109 TIPVVFAAVTDPVGAKLVKSLEQPGGNVTGVS------DLLPVAQQIELIKALLPNAKSIGVLYNPGEAN----SVSLVE 178 (322)
T ss_pred CCCEEEEccCchhhccCCccccCCCCceeecC------CcchHHHHHHHHHHhCCCCeeEEEEeCCCCcc----cHHHHH
Confidence 22333332 211111111222233443332 123455544444432 1122343555565443 577899
Q ss_pred HHHHHHHhCCceeEEccc
Q 023599 213 QIRQLMRLKRLLPFFDCA 230 (280)
Q Consensus 213 ~i~~~~~~~~~~ii~De~ 230 (280)
++.+.|++.|+-+++=-+
T Consensus 179 elk~~A~~~Gl~vve~~v 196 (322)
T COG2984 179 ELKKEARKAGLEVVEAAV 196 (322)
T ss_pred HHHHHHHHCCCEEEEEec
Confidence 999999999998886443
No 442
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=46.96 E-value=2e+02 Score=25.19 Aligned_cols=53 Identities=15% Similarity=0.069 Sum_probs=32.4
Q ss_pred CCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
..|+. .++|+.++.++ +.+ ...-.-.|+++.-.-..-...++.+|++++.++-
T Consensus 71 ~~vv~--~SsGN~g~alA--~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 71 KAVAC--ASTGNTSASLA--AYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred CEEEE--eCCCHHHHHHH--HHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 34544 67888888877 333 2233345566554433345667789999988763
No 443
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=46.88 E-value=1.1e+02 Score=23.65 Aligned_cols=80 Identities=14% Similarity=0.105 Sum_probs=45.0
Q ss_pred hcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCC-----CCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCH
Q 023599 134 HYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPK-----TNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTA 208 (280)
Q Consensus 134 ~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~-----~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~ 208 (280)
..+|++|.+.-. +.++...++..+.++.-++. +++ ...+..+..++.+... + .+++.-++--|-|
T Consensus 8 ~~~~~~V~~VG~-f~P~~~~l~~~~~~v~v~d~-~~~~~~~~~~~~~~~~~~~~l~~a-D-~viiTGsTlvN~T------ 77 (147)
T PF04016_consen 8 IGPGDKVGMVGY-FQPLVEKLKERGAEVRVFDL-NPDNIGEEPGDVPDEDAEEILPWA-D-VVIITGSTLVNGT------ 77 (147)
T ss_dssp TTTTSEEEEES---HCCHHHHCCCCSEEEEEES-SGGG--SSCT-EEGGGHHHHGGG--S-EEEEECHHCCTTT------
T ss_pred hcCCCEEEEEcC-cHHHHHHHhcCCCCEEEEEC-CCCCCCCCCCcCCHHHHHHHHccC-C-EEEEEeeeeecCC------
Confidence 457899988832 33566666666778888887 441 1223445555555443 3 2233323333444
Q ss_pred HHHHHHHHHHHhCCcee
Q 023599 209 QQWEQIRQLMRLKRLLP 225 (280)
Q Consensus 209 ~~l~~i~~~~~~~~~~i 225 (280)
+.+|++.|++....+
T Consensus 78 --i~~iL~~~~~~~~vi 92 (147)
T PF04016_consen 78 --IDDILELARNAREVI 92 (147)
T ss_dssp --HHHHHHHTTTSSEEE
T ss_pred --HHHHHHhCccCCeEE
Confidence 899999999544443
No 444
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=46.72 E-value=1.9e+02 Score=24.84 Aligned_cols=112 Identities=9% Similarity=0.068 Sum_probs=65.4
Q ss_pred hcCC-CEEEEeCCCCCCh---HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCC-CH
Q 023599 134 HYYQ-HTVYLSQPTYGNH---PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDP-TA 208 (280)
Q Consensus 134 ~~~G-d~Vli~~P~y~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~-~~ 208 (280)
.+.| |.|++++-.+... ...++.+|+..+.+=. +. ...+.++........ .+++++ -.-.||.-- -.
T Consensus 116 ~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~--Pt---T~~eri~~i~~~a~g--FIY~vS-~~GvTG~~~~~~ 187 (263)
T CHL00200 116 SQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA--PT---SSKSRIQKIARAAPG--CIYLVS-TTGVTGLKTELD 187 (263)
T ss_pred HHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC--CC---CCHHHHHHHHHhCCC--cEEEEc-CCCCCCCCcccc
Confidence 3456 8999999777544 3455678877665533 32 245666665544322 244444 456788732 13
Q ss_pred HHHHHHHHHHHhC-CceeEEcccCCCcccCcCCChhHHHHhhhcCCeEEEEecc
Q 023599 209 QQWEQIRQLMRLK-RLLPFFDCAYQGFVMNMDADALPVRMFVADGGECLVAQSY 261 (280)
Q Consensus 209 ~~l~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 261 (280)
++++++++.++++ +..+.++- .- ........+.+.+.+-+++||.
T Consensus 188 ~~~~~~i~~ir~~t~~Pi~vGF-----GI---~~~e~~~~~~~~GADGvVVGSa 233 (263)
T CHL00200 188 KKLKKLIETIKKMTNKPIILGF-----GI---STSEQIKQIKGWNINGIVIGSA 233 (263)
T ss_pred HHHHHHHHHHHHhcCCCEEEEC-----Cc---CCHHHHHHHHhcCCCEEEECHH
Confidence 5678888888875 55555532 11 1233445555555667778873
No 445
>PRK06450 threonine synthase; Validated
Probab=46.64 E-value=2.1e+02 Score=25.52 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=33.5
Q ss_pred CCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
..|+. .++|+.+..+++ +.+...-.-.|++|.-.-..-...++.+|++++.++-
T Consensus 98 ~~vv~--aSsGN~g~slA~-~aa~~G~~~~i~vP~~~~~~k~~~i~~~GA~vi~v~~ 151 (338)
T PRK06450 98 KQISE--DSSGNAGASIAA-YGAAAGIEVKIFVPETASGGKLKQIESYGAEVVRVRG 151 (338)
T ss_pred CEEEE--ECCcHHHHHHHH-HHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Confidence 44554 777788877773 2222233345666654434455667789999998864
No 446
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=45.84 E-value=1.2e+02 Score=26.41 Aligned_cols=49 Identities=12% Similarity=0.184 Sum_probs=32.9
Q ss_pred ecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 116 QCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 116 ~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
.+++|+.+..++ +.+ ...-.-+|+++.-.-..-...++.+|++++.++-
T Consensus 63 ~aSsGN~g~alA--~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 112 (299)
T TIGR01136 63 EATSGNTGIALA--MVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPA 112 (299)
T ss_pred EeCCChHHHHHH--HHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 388888888888 443 2222246666654445556778899999998764
No 447
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=45.22 E-value=2.2e+02 Score=25.60 Aligned_cols=48 Identities=8% Similarity=0.076 Sum_probs=30.6
Q ss_pred ecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEE
Q 023599 116 QCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYH 165 (280)
Q Consensus 116 ~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~ 165 (280)
.+++|+.+..++ +.+ .+.-.-.|++|.-.-..-...++.+|++++.++
T Consensus 53 ~aSsGN~g~alA--~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 101 (380)
T TIGR01127 53 AASAGNHAQGVA--YAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHG 101 (380)
T ss_pred EECCCHHHHHHH--HHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEEC
Confidence 388888888877 443 222224566665444445667788999998764
No 448
>TIGR00608 radc DNA repair protein radc. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=44.66 E-value=78 Score=26.35 Aligned_cols=53 Identities=19% Similarity=0.251 Sum_probs=29.4
Q ss_pred HHHHHHHhcCCCCcEEEEecCCCCCCCCC-CCHHHH---HHHHHHHHhCC-----ceeEEcccCCC
Q 023599 177 QGMLQDLGAAPSGAIVLLQASGHNPTGID-PTAQQW---EQIRQLMRLKR-----LLPFFDCAYQG 233 (280)
Q Consensus 177 ~~l~~~~~~~~~~~~~v~~~~p~NPTG~~-~~~~~l---~~i~~~~~~~~-----~~ii~De~y~~ 233 (280)
+-++.++..+. ..+++++|+| .|.. .|.+|+ ++|.+.|+--| .+||.++-|.-
T Consensus 150 eI~~~Al~~~A-~~vIlaHNHP---SG~~~PS~~Di~~T~~l~~a~~~lgI~llDHiIvg~~~y~S 211 (218)
T TIGR00608 150 EIFKEALKLSA-SALILAHNHP---SGEPSPSQEDILITERLRKAAELLGIELLDHLIIGKGRYVS 211 (218)
T ss_pred HHHHHHHHhhC-CeEEEEeecC---CCCCCCCHHHHHHHHHHHHHHHhCCCEEeeEEEEcCCcEEE
Confidence 45666676553 3456666555 4443 455665 45555565544 45666665543
No 449
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=44.49 E-value=62 Score=29.63 Aligned_cols=68 Identities=13% Similarity=0.116 Sum_probs=40.6
Q ss_pred eeeEEEeecCCC-CCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCc
Q 023599 160 AMKTYHYYDPKT-NGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGF 234 (280)
Q Consensus 160 ~~~~v~~~~~~~-~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~ 234 (280)
++..++. ++. ...+.+.+.+.+...-+...+++++... -|..-+ .++++++|++.|+.+++|--=.+|
T Consensus 115 QllRvD~--Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~--KG~L~~---~q~~I~~ar~~~~pVLvDPKg~Df 183 (467)
T COG2870 115 QLLRLDF--EEKFPIEDENKLLEKIKNALKSFDALVLSDYA--KGVLTN---VQKMIDLAREAGIPVLVDPKGKDF 183 (467)
T ss_pred eEEEecc--cccCcchhHHHHHHHHHHHhhcCCEEEEeccc--cccchh---HHHHHHHHHHcCCcEEECCCCcch
Confidence 3555554 222 2244555555555432223377776544 344332 788999999999999999654444
No 450
>PRK08813 threonine dehydratase; Provisional
Probab=44.03 E-value=1.3e+02 Score=26.96 Aligned_cols=74 Identities=15% Similarity=0.091 Sum_probs=42.5
Q ss_pred CCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEE
Q 023599 86 TGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTY 164 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v 164 (280)
.|....|-+............ ...|+. .++|+.++.++ +.+ .+.---.|++|.-.-..-...++.+|++++.+
T Consensus 60 tGSfK~RgA~~~l~~a~~~~~--~~~VV~--aSsGN~G~alA--~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~ 133 (349)
T PRK08813 60 TGSYKVRGALNALLAGLERGD--ERPVIC--ASAGNHAQGVA--WSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQH 133 (349)
T ss_pred cCCCHHHHHHHHHHHHHHcCC--CCeEEE--ECCCHHHHHHH--HHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEE
Confidence 466566655554421111100 123444 88888888887 443 23333467776644445567778899999877
Q ss_pred E
Q 023599 165 H 165 (280)
Q Consensus 165 ~ 165 (280)
.
T Consensus 134 g 134 (349)
T PRK08813 134 G 134 (349)
T ss_pred C
Confidence 5
No 451
>COG4098 comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]
Probab=43.96 E-value=2.5e+02 Score=25.43 Aligned_cols=60 Identities=10% Similarity=0.055 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHHHHhCCCCccccCCCeEE--eecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHH
Q 023599 86 TGLPEFNKLSAKLIFGADSPAIKENRVST--VQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFF 154 (280)
Q Consensus 86 ~G~~~lr~~ia~~l~~~~~~~~~~~~i~~--v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~ 154 (280)
.|.+..-+++.+++... ++.++ |...|-|+-++-. +...+..|+.|.+.+|--.-...+.
T Consensus 100 ~~Q~~as~~l~q~i~~k-------~~~lv~AV~GaGKTEMif~~--i~~al~~G~~vciASPRvDVclEl~ 161 (441)
T COG4098 100 PGQKKASNQLVQYIKQK-------EDTLVWAVTGAGKTEMIFQG--IEQALNQGGRVCIASPRVDVCLELY 161 (441)
T ss_pred hhHHHHHHHHHHHHHhc-------CcEEEEEecCCCchhhhHHH--HHHHHhcCCeEEEecCcccchHHHH
Confidence 34445555555555433 33332 2244447777766 6667889999999999766554443
No 452
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=43.91 E-value=1.2e+02 Score=21.84 Aligned_cols=67 Identities=9% Similarity=0.166 Sum_probs=40.8
Q ss_pred HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhC--CceeEEc
Q 023599 151 PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLK--RLLPFFD 228 (280)
Q Consensus 151 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~--~~~ii~D 228 (280)
...++..|.++..++. ..+.+.+.+.+.+...+ ++.++.... .+.....++++..++. ++.++.=
T Consensus 21 a~~l~~~G~~v~~~d~------~~~~~~l~~~~~~~~pd--~V~iS~~~~-----~~~~~~~~l~~~~k~~~p~~~iv~G 87 (121)
T PF02310_consen 21 AAYLRKAGHEVDILDA------NVPPEELVEALRAERPD--VVGISVSMT-----PNLPEAKRLARAIKERNPNIPIVVG 87 (121)
T ss_dssp HHHHHHTTBEEEEEES------SB-HHHHHHHHHHTTCS--EEEEEESSS-----THHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHHCCCeEEEECC------CCCHHHHHHHHhcCCCc--EEEEEccCc-----CcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3445667888887766 13558888877655222 455533322 3466778888888775 5666654
Q ss_pred cc
Q 023599 229 CA 230 (280)
Q Consensus 229 e~ 230 (280)
-.
T Consensus 88 G~ 89 (121)
T PF02310_consen 88 GP 89 (121)
T ss_dssp ES
T ss_pred CC
Confidence 43
No 453
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=43.52 E-value=2.3e+02 Score=24.84 Aligned_cols=132 Identities=14% Similarity=0.033 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHhCCCCccccCCCeE-EeecccchhHHHHHHHHHHhh-cCCCEEEEeC--CCCCChHHHHHHcCCeee
Q 023599 87 GLPEFNKLSAKLIFGADSPAIKENRVS-TVQCLSGSGSLRIGADFLAKH-YYQHTVYLSQ--PTYGNHPNFFAAAGLAMK 162 (280)
Q Consensus 87 G~~~lr~~ia~~l~~~~~~~~~~~~i~-~v~t~g~~~al~~~~~~~~~~-~~Gd~Vli~~--P~y~~~~~~~~~~G~~~~ 162 (280)
...+|.+++.+..... .....++ ++-.-||.+.-.++.++...+ ..|.+|++.+ |..+... ..+|.+..
T Consensus 74 ~~~~l~~~l~~~~~~~----~~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~~~~~~---~~lg~~~~ 146 (322)
T TIGR03815 74 AEGWLVELLADLDQSP----PARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPWGGGLD---LLLGAEDV 146 (322)
T ss_pred CHHHHHHHHHhhccCC----CCCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCCCCCee---eeecCCCC
Confidence 3567777777652111 1123444 333456655555444333322 3677777765 4433221 11232211
Q ss_pred E-E---EeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEccc
Q 023599 163 T-Y---HYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCA 230 (280)
Q Consensus 163 ~-v---~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~ 230 (280)
. . .. ......+|.+.+.+.+... . .+-+++.+..+ +.-++.+.++++++..+++-=+||+|..
T Consensus 147 ~~~~~~~~-~~~~~~~~~~~l~~~~~~~-~--~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p 213 (322)
T TIGR03815 147 PGLRWPDL-SQARGRLPAGALRDALPRR-G--GLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLP 213 (322)
T ss_pred CCcCHHHH-hhcCCCcCHHHHHHhCCCc-C--CeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCC
Confidence 0 0 11 0111245666777666542 2 25555555544 3447788888888888776568899986
No 454
>PLN03244 alpha-amylase; Provisional
Probab=43.30 E-value=42 Score=33.53 Aligned_cols=41 Identities=12% Similarity=0.044 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 197 SGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 197 ~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
++--|+...-++++++++++-|++.|+-||.|-+|..+..+
T Consensus 429 ~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 429 NFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 34455566667999999999999999999999999877653
No 455
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=42.89 E-value=76 Score=27.42 Aligned_cols=27 Identities=7% Similarity=0.121 Sum_probs=15.3
Q ss_pred CCHHHHHHHHHHHHhCCc-eeEEcccCC
Q 023599 206 PTAQQWEQIRQLMRLKRL-LPFFDCAYQ 232 (280)
Q Consensus 206 ~~~~~l~~i~~~~~~~~~-~ii~De~y~ 232 (280)
.+.+..++.+++|.++|+ .+++|+-|.
T Consensus 29 ~~t~~~k~yIDfAa~~G~eYvlvD~GW~ 56 (273)
T PF10566_consen 29 ATTETQKRYIDFAAEMGIEYVLVDAGWY 56 (273)
T ss_dssp SSHHHHHHHHHHHHHTT-SEEEEBTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeccccc
Confidence 355556666666666664 555566554
No 456
>COG1204 Superfamily II helicase [General function prediction only]
Probab=42.87 E-value=2.5e+02 Score=28.25 Aligned_cols=57 Identities=12% Similarity=-0.066 Sum_probs=33.9
Q ss_pred CCeEE-eecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCC----hHH--HHHHcCCeeeEEEe
Q 023599 110 NRVST-VQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGN----HPN--FFAAAGLAMKTYHY 166 (280)
Q Consensus 110 ~~i~~-v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~----~~~--~~~~~G~~~~~v~~ 166 (280)
+|+++ .+|.+|...+..++.+..+.+.|.+++...|.=.- +.. -+..+|+++....-
T Consensus 48 ~N~li~aPTgsGKTlIA~lai~~~l~~~~~k~vYivPlkALa~Ek~~~~~~~~~~GirV~~~Tg 111 (766)
T COG1204 48 ENVLISAPTGSGKTLIALLAILSTLLEGGGKVVYIVPLKALAEEKYEEFSRLEELGIRVGISTG 111 (766)
T ss_pred CcEEEEcCCCCchHHHHHHHHHHHHHhcCCcEEEEeChHHHHHHHHHHhhhHHhcCCEEEEecC
Confidence 66664 66777877777665333344445677777774322 221 23467888877654
No 457
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=42.17 E-value=2e+02 Score=23.96 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=50.3
Q ss_pred HHHHHHcCC-eeeEEEeecCCCCCcCHHHHHH---HHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeE
Q 023599 151 PNFFAAAGL-AMKTYHYYDPKTNGLDFQGMLQ---DLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPF 226 (280)
Q Consensus 151 ~~~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~---~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii 226 (280)
..+++..|. .++++|| ... -..|+++. ++.++ . +. --|||- ++.+.+++|+++|.+-|+--|
T Consensus 141 iaml~dmG~~SiKffPM-~Gl---~~leE~~avA~aca~~-g---~~-----lEPTGG-Idl~Nf~~I~~i~ldaGv~kv 206 (236)
T TIGR03581 141 IAMLKDMGGSSVKFFPM-GGL---KHLEEYAAVAKACAKH-G---FY-----LEPTGG-IDLDNFEEIVQIALDAGVEKV 206 (236)
T ss_pred HHHHHHcCCCeeeEeec-CCc---ccHHHHHHHHHHHHHc-C---Cc-----cCCCCC-ccHHhHHHHHHHHHHcCCCee
Confidence 344556676 5788999 222 13444444 44333 2 22 279997 489999999999999999999
Q ss_pred EcccCCCccc
Q 023599 227 FDCAYQGFVM 236 (280)
Q Consensus 227 ~De~y~~~~~ 236 (280)
.=-+|.....
T Consensus 207 iPHIYssiID 216 (236)
T TIGR03581 207 IPHVYSSIID 216 (236)
T ss_pred ccccceeccc
Confidence 9999988875
No 458
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=41.99 E-value=2.3e+02 Score=24.59 Aligned_cols=17 Identities=6% Similarity=-0.050 Sum_probs=13.4
Q ss_pred hHHHHHHcCCeeeEEEe
Q 023599 150 HPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 150 ~~~~~~~~G~~~~~v~~ 166 (280)
....++.+|++++.++-
T Consensus 100 ~~~~~~~~Ga~v~~~~~ 116 (307)
T cd06449 100 NILLSRIMGADVRLVSA 116 (307)
T ss_pred cHHHHHHCCCEEEEECC
Confidence 45667889999998874
No 459
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=41.46 E-value=47 Score=25.20 Aligned_cols=50 Identities=20% Similarity=0.195 Sum_probs=26.1
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCCCC-----CCCCCCHHHHH----HHHHHHHhCCceeEEcc
Q 023599 175 DFQGMLQDLGAAPSGAIVLLQASGHNP-----TGIDPTAQQWE----QIRQLMRLKRLLPFFDC 229 (280)
Q Consensus 175 d~~~l~~~~~~~~~~~~~v~~~~p~NP-----TG~~~~~~~l~----~i~~~~~~~~~~ii~De 229 (280)
|++-+...+.+...+ .+++.-|-|+ || ++.++++ +|.+.|+++|. =+.|-
T Consensus 37 Dl~l~L~~~k~~g~~--~lfVi~PvNg~wydytG--~~~~~r~~~y~kI~~~~~~~gf-~v~D~ 95 (130)
T PF04914_consen 37 DLQLLLDVCKELGID--VLFVIQPVNGKWYDYTG--LSKEMRQEYYKKIKYQLKSQGF-NVADF 95 (130)
T ss_dssp HHHHHHHHHHHTT-E--EEEEE----HHHHHHTT----HHHHHHHHHHHHHHHHTTT---EEE-
T ss_pred HHHHHHHHHHHcCCc--eEEEecCCcHHHHHHhC--CCHHHHHHHHHHHHHHHHHCCC-EEEec
Confidence 677777777766443 3444448887 77 6777774 56667788887 44443
No 460
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=41.37 E-value=22 Score=30.39 Aligned_cols=31 Identities=6% Similarity=0.108 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHHhCCceeEEcccCCCcccC
Q 023599 207 TAQQWEQIRQLMRLKRLLPFFDCAYQGFVMN 237 (280)
Q Consensus 207 ~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~ 237 (280)
+.++++++++.|+++|+-||.|-++.....+
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~ 80 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHTSDD 80 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEEETT
T ss_pred hhhhhhhhhhccccccceEEEeeeccccccc
Confidence 4799999999999999999999999766553
No 461
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=40.94 E-value=1.7e+02 Score=24.28 Aligned_cols=47 Identities=11% Similarity=0.073 Sum_probs=28.4
Q ss_pred cccchhHHHHHHHHHHhhcCC--CEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 117 CLSGSGSLRIGADFLAKHYYQ--HTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~G--d~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
.++|..+..++ ..+.. .| -.|+++.-.-......++.+|++++.++-
T Consensus 56 ~ssGN~g~alA--~~a~~-~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 56 STGGNTGIALA--AAAAR-LGLKCTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred eCCcHHHHHHH--HHHHH-cCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 56667777766 33322 44 34555544434455667789999988864
No 462
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=40.78 E-value=3e+02 Score=25.42 Aligned_cols=170 Identities=12% Similarity=0.098 Sum_probs=90.6
Q ss_pred CeeEeecceeecCCCCccchHHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchh
Q 023599 43 MKLNLGFGVYRTEEGKPLLLNAVRQAEQLLVNDLSADKEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSG 122 (280)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~ 122 (280)
-+||-.+|.- ....-+...++++...+.........-+....+.++|+.+.+. ..+ ..|...
T Consensus 61 tKVNaNIGtS---~~~~d~~~E~~K~~~A~~~GADtiMDLStggdl~~iR~~il~~-----------s~v----pvGTVP 122 (431)
T PRK13352 61 TKVNANIGTS---SDISDIEEELEKAKVAVKYGADTIMDLSTGGDLDEIRRAIIEA-----------SPV----PVGTVP 122 (431)
T ss_pred eEEeeeecCC---CCCCCHHHHHHHHHHHHHcCCCeEeeccCCCCHHHHHHHHHHc-----------CCC----CCcChh
Confidence 4566666653 2222445556655554432112223333344567788877664 222 335454
Q ss_pred HHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHH---HcCCeeeEEEeecCCCCCcCHHHHHHHHhcC--CC--------C
Q 023599 123 SLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFA---AAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA--PS--------G 189 (280)
Q Consensus 123 al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~--~~--------~ 189 (280)
..+++ ....-+.|+.+-+ +...+...++ ..|....++.+ ++..+.++.+-... .. -
T Consensus 123 iYqa~--~~~~~k~~~~~~m---t~d~~~~~ie~qa~~GVDfmTiHc------Gi~~~~~~~~~~~~R~~giVSRGGs~~ 191 (431)
T PRK13352 123 IYQAA--VEAARKYGSVVDM---TEDDLFDVIEKQAKDGVDFMTIHC------GVTRETLERLKKSGRIMGIVSRGGSFL 191 (431)
T ss_pred HHHHH--HHHHhcCCChhhC---CHHHHHHHHHHHHHhCCCEEEEcc------chhHHHHHHHHhcCCccCeecCCHHHH
Confidence 44554 2222223322222 2222333333 35777777776 56777777755322 11 0
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHH
Q 023599 190 AIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVR 246 (280)
Q Consensus 190 ~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 246 (280)
...+..++--||- -+...+|+++|++|++.+=.=|..++-.-.+..+...+.
T Consensus 192 ~~WM~~n~~ENPl-----ye~fD~lLeI~~~yDVtlSLGDglRPG~i~Da~D~aQi~ 243 (431)
T PRK13352 192 AAWMLHNNKENPL-----YEHFDYLLEILKEYDVTLSLGDGLRPGCIADATDRAQIQ 243 (431)
T ss_pred HHHHHHcCCcCch-----HHHHHHHHHHHHHhCeeeeccCCcCCCccccCCcHHHHH
Confidence 0123455667886 567899999999999999888888777653334444333
No 463
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=40.67 E-value=2.5e+02 Score=24.61 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=29.5
Q ss_pred cccchhHHHHHHHHHHhhcCC--CEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 117 CLSGSGSLRIGADFLAKHYYQ--HTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~G--d~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
.++|+.+..++ +.+. ..| -.|+++.-.-..-...++.+|++++.++-
T Consensus 57 aSsGN~g~alA--~~a~-~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~ 105 (316)
T cd06448 57 SSGGNAGLAAA--YAAR-KLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGK 105 (316)
T ss_pred eCCcHHHHHHH--HHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 66777777777 4332 234 35555554334446777889999988763
No 464
>PRK08198 threonine dehydratase; Provisional
Probab=40.49 E-value=2.3e+02 Score=25.74 Aligned_cols=52 Identities=10% Similarity=0.038 Sum_probs=31.3
Q ss_pred CCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEE
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYH 165 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~ 165 (280)
..|+. .++|+.+..++ +.+ .+.---.|++|...-..-...++.+|++++.++
T Consensus 71 ~~vv~--aSsGN~g~alA--~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~ 123 (404)
T PRK08198 71 RGVVA--ASAGNHAQGVA--YAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHG 123 (404)
T ss_pred CEEEE--ECCCHHHHHHH--HHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEEC
Confidence 34444 77888888877 433 222224555554433333456788999998775
No 465
>PRK06721 threonine synthase; Reviewed
Probab=40.38 E-value=2.7e+02 Score=24.86 Aligned_cols=47 Identities=11% Similarity=0.005 Sum_probs=29.0
Q ss_pred cccchhHHHHHHHHHHhhcCC--CEEEEeCCC-CCChHHHHHHcCCeeeEEEe
Q 023599 117 CLSGSGSLRIGADFLAKHYYQ--HTVYLSQPT-YGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~G--d~Vli~~P~-y~~~~~~~~~~G~~~~~v~~ 166 (280)
.++|+.+..++ ..+. ..| -.|+++... ...-...++.+|++++.++-
T Consensus 81 aSsGN~G~alA--~~aa-~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~ 130 (352)
T PRK06721 81 ASTGNTSASAA--AYAA-RLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEG 130 (352)
T ss_pred ECCcHHHHHHH--HHHH-HCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECC
Confidence 66777777766 3332 234 355555443 23456667889999998863
No 466
>PF12427 DUF3665: Branched-chain amino acid aminotransferase ; InterPro: IPR024614 This uncharacterised domain is found in the N-terminal region of branched-chain amino acid aminotransferase II proteins in Corynebacterium. It is typically between 23 and 35 amino acids in length and contains a conserved TRT sequence motif.
Probab=40.35 E-value=46 Score=16.69 Aligned_cols=17 Identities=24% Similarity=0.407 Sum_probs=12.0
Q ss_pred ecCCCCCCCCCCCHHHHHHHH
Q 023599 195 QASGHNPTGIDPTAQQWEQIR 215 (280)
Q Consensus 195 ~~~p~NPTG~~~~~~~l~~i~ 215 (280)
+..-+||| +.+++++|.
T Consensus 6 iTRT~nPT----s~~~L~eIL 22 (23)
T PF12427_consen 6 ITRTENPT----SPERLKEIL 22 (23)
T ss_pred EeccCCCC----CHHHHHHHh
Confidence 34457888 678888774
No 467
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=40.21 E-value=1.6e+02 Score=25.61 Aligned_cols=29 Identities=10% Similarity=0.111 Sum_probs=17.7
Q ss_pred CEEEEeCCC-CCChHHHHHHcCCeeeEEEe
Q 023599 138 HTVYLSQPT-YGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 138 d~Vli~~P~-y~~~~~~~~~~G~~~~~v~~ 166 (280)
-.|+++... -.....+++.+|++++.++-
T Consensus 84 ~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~~ 113 (311)
T TIGR01275 84 AVLVLREKEELNGNLLLDKLMGAETRVYSA 113 (311)
T ss_pred eEEEecCCccCCCCHHHHHHcCCEEEEECc
Confidence 345555422 22345566899999987763
No 468
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases. Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).
Probab=39.81 E-value=1e+02 Score=26.30 Aligned_cols=70 Identities=9% Similarity=0.024 Sum_probs=34.2
Q ss_pred CCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 158 GLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 158 G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
++++..++....+....+.+.+.+.+.......+=|+..+...++-.......+++.++.+.++|++++.
T Consensus 74 ~a~i~~~~v~~~~~~~~~~~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~l~~a~~~a~~~gvlvv~ 143 (267)
T cd07476 74 LCRGLNIPIFAEDRRGCSQLDLARAINLALEQGAHIINISGGRLTQTGEADPILANAVAMCQQNNVLIVA 143 (267)
T ss_pred CCeEEEEEEEeCCCCCCCHHHHHHHHHHHHHCCCCEEEecCCcCCCCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 3455555543333333344444444432111111234333333332223345678888888899988887
No 469
>PRK11579 putative oxidoreductase; Provisional
Probab=39.56 E-value=2.7e+02 Score=24.61 Aligned_cols=72 Identities=13% Similarity=0.098 Sum_probs=41.6
Q ss_pred CCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCcee
Q 023599 146 TYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLP 225 (280)
Q Consensus 146 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~i 225 (280)
.|..+..++..-.+.++.+.. +. ....+...++++.. + =|+.. -|.. .+.++.+++++.|+++|+.+
T Consensus 52 ~~~~~~ell~~~~vD~V~I~t--p~--~~H~~~~~~al~aG-k---hVl~E---KPla--~t~~ea~~l~~~a~~~g~~l 118 (346)
T PRK11579 52 VVSEPQHLFNDPNIDLIVIPT--PN--DTHFPLAKAALEAG-K---HVVVD---KPFT--VTLSQARELDALAKSAGRVL 118 (346)
T ss_pred eeCCHHHHhcCCCCCEEEEcC--Cc--HHHHHHHHHHHHCC-C---eEEEe---CCCC--CCHHHHHHHHHHHHHhCCEE
Confidence 455566666555566666655 21 23556666666543 2 23333 3433 46777888888888888776
Q ss_pred EEccc
Q 023599 226 FFDCA 230 (280)
Q Consensus 226 i~De~ 230 (280)
.+--.
T Consensus 119 ~v~~~ 123 (346)
T PRK11579 119 SVFHN 123 (346)
T ss_pred EEEee
Confidence 55443
No 470
>PRK07334 threonine dehydratase; Provisional
Probab=39.36 E-value=1e+02 Score=28.08 Aligned_cols=52 Identities=12% Similarity=0.017 Sum_probs=32.6
Q ss_pred CCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEE
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYH 165 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~ 165 (280)
..++. .++|+.+..++ +.+ ...---.|++|...-..-...++.+|++++.++
T Consensus 72 ~~vv~--aSsGN~g~alA--~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~ 124 (403)
T PRK07334 72 RGVIA--MSAGNHAQGVA--YHAQRLGIPATIVMPRFTPTVKVERTRGFGAEVVLHG 124 (403)
T ss_pred CcEEE--ECCcHHHHHHH--HHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEEC
Confidence 34544 77788888777 333 222224666665444455667788999998765
No 471
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=38.78 E-value=1.8e+02 Score=22.48 Aligned_cols=88 Identities=13% Similarity=0.132 Sum_probs=46.2
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEec
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQA 196 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~ 196 (280)
..|+++.+-... +..++..|-+|....-.-..... ..+++++..++ .|.+.+.+++... + .++.+
T Consensus 3 V~GatG~vG~~l-~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~~~-d---~vi~~ 67 (183)
T PF13460_consen 3 VFGATGFVGRAL-AKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALKGA-D---AVIHA 67 (183)
T ss_dssp EETTTSHHHHHH-HHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHTTS-S---EEEEC
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhhhc-c---hhhhh
Confidence 345544443331 23345566555544333222222 33444433333 4789999988743 2 34443
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCc
Q 023599 197 SGHNPTGIDPTAQQWEQIRQLMRLKRL 223 (280)
Q Consensus 197 ~p~NPTG~~~~~~~l~~i~~~~~~~~~ 223 (280)
-+.++. .....+.+++.|+++++
T Consensus 68 ~~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 68 AGPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp CHSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhhcc----ccccccccccccccccc
Confidence 333333 36667889999998875
No 472
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=38.66 E-value=36 Score=29.78 Aligned_cols=25 Identities=8% Similarity=-0.134 Sum_probs=21.3
Q ss_pred CCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 203 GIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 203 G~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
+..++.+|+++|++.|+++|+-||=
T Consensus 54 ~~~yT~~ei~ei~~yA~~~gI~vIP 78 (301)
T cd06565 54 RGAYTKEEIREIDDYAAELGIEVIP 78 (301)
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEe
Confidence 4459999999999999999987664
No 473
>TIGR03793 TOMM_pelo TOMM propeptide domain. This model represents a domain that is conserved among a large number of putative thiazole/oxazole-modified microcins (TOMM). Oddly, most of this seqence region appears homologous to nitrile hydratase subunits. This family is expanded especially in Pelotomaculum thermopropionicum SI.
Probab=38.58 E-value=57 Score=22.25 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=17.2
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHH
Q 023599 191 IVLLQASGHNPTGIDPTAQQWEQIR 215 (280)
Q Consensus 191 ~~v~~~~p~NPTG~~~~~~~l~~i~ 215 (280)
.-+++ |.+|.| -++.++|..++
T Consensus 54 ~~lVl--P~~P~~-~lse~~L~~va 75 (77)
T TIGR03793 54 LYLVL--PVNPDI-ELTDEQLDAVA 75 (77)
T ss_pred EEEEe--cCCCCC-CCCHHHHHHhh
Confidence 34555 999999 89999987764
No 474
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=38.37 E-value=39 Score=27.15 Aligned_cols=44 Identities=20% Similarity=0.255 Sum_probs=18.3
Q ss_pred hhHHHHHHHHHHhhcCCC-EEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 121 SGSLRIGADFLAKHYYQH-TVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 121 ~~al~~~~~~~~~~~~Gd-~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
+.++-++ +..+...|. .|+|..|...+...+++..........+
T Consensus 11 Sa~lGl~--~a~l~~~~~~~I~vtAP~~~~~~~lf~~~~~~l~~~~~ 55 (177)
T PF05127_consen 11 SAALGLA--AAALIQKGKIRILVTAPSPENVQTLFEFAEKGLKALGY 55 (177)
T ss_dssp HHHHHHC--CCCSSS-----EEEE-SS--S-HHHHHCC---------
T ss_pred HHHHHHH--HHHHHHhcCceEEEecCCHHHHHHHHHHHHhhcccccc
Confidence 4444444 333444554 7999999999999999876544444443
No 475
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=38.19 E-value=62 Score=28.84 Aligned_cols=47 Identities=9% Similarity=0.077 Sum_probs=32.7
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCC
Q 023599 192 VLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDA 240 (280)
Q Consensus 192 ~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~ 240 (280)
+=+..+|.+ |-..+.++..++++.+++.|.-|+.|--|+++--++.+
T Consensus 43 lRvwv~P~~--~g~~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~ 89 (332)
T PF07745_consen 43 LRVWVNPYD--GGYNDLEDVIALAKRAKAAGMKVLLDFHYSDFWADPGK 89 (332)
T ss_dssp EEE-SS-TT--TTTTSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB
T ss_pred EEeccCCcc--cccCCHHHHHHHHHHHHHCCCeEEEeecccCCCCCCCC
Confidence 334444444 37789999999999999999999999999998776543
No 476
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=37.94 E-value=53 Score=31.44 Aligned_cols=31 Identities=13% Similarity=0.069 Sum_probs=27.2
Q ss_pred CCCHHHHHHHHHHHHhCCceeEEcccCCCcc
Q 023599 205 DPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV 235 (280)
Q Consensus 205 ~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~ 235 (280)
.-+.++++++++-|+++|+-||.|-+|....
T Consensus 156 ~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 156 YGGPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 3358999999999999999999999997654
No 477
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=37.74 E-value=38 Score=32.84 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcc
Q 023599 197 SGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFV 235 (280)
Q Consensus 197 ~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~ 235 (280)
+|+.|++ ..++++++++-|+++|+-||.|-+|....
T Consensus 220 ~p~~~~~---~~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 220 NPYDPAT---RIRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred CCCccch---HHHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 3455543 36899999999999999999999997664
No 478
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=37.66 E-value=2.9e+02 Score=24.39 Aligned_cols=109 Identities=11% Similarity=0.055 Sum_probs=62.2
Q ss_pred cCCCeEEeecccchhHHHHHHHHHHhhcCCC--EEEEeC--CCCCChHHHHH--HcCCeeeEEEeecCCCCCcCHHHHHH
Q 023599 108 KENRVSTVQCLSGSGSLRIGADFLAKHYYQH--TVYLSQ--PTYGNHPNFFA--AAGLAMKTYHYYDPKTNGLDFQGMLQ 181 (280)
Q Consensus 108 ~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd--~Vli~~--P~y~~~~~~~~--~~G~~~~~v~~~~~~~~~~d~~~l~~ 181 (280)
..++|++ |.|.+...... +....+.|. +|++.+ |.+.++...-. ..|++..-++ |. .+.+
T Consensus 161 hsnEviL--T~g~SrTV~~F--L~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------da-aVfA 226 (353)
T KOG1465|consen 161 HSNEVIL--TLGSSRTVENF--LKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------DA-AVFA 226 (353)
T ss_pred ccCceEE--ecCccHHHHHH--HHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------cH-HHHH
Confidence 3477887 99877776666 444445554 455554 55555433322 3455544443 22 2223
Q ss_pred HHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCC
Q 023599 182 DLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQG 233 (280)
Q Consensus 182 ~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~ 233 (280)
.+.+-.+ +++-+..--+-|.+....-...++..|++|-+.+++=.-..-
T Consensus 227 ~MsrVnK---VIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~yK 275 (353)
T KOG1465|consen 227 MMSRVNK---VIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPMYK 275 (353)
T ss_pred Hhhhcce---EEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecchhh
Confidence 3333222 555444445666677777788888899999888777554433
No 479
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=37.58 E-value=2.4e+02 Score=23.53 Aligned_cols=95 Identities=18% Similarity=0.143 Sum_probs=60.4
Q ss_pred cccchhHHHHHHHHHHhhcCCCEE---EEeCC----CCCC----h---HHHHHHcCCeeeEEEeecCCCCCcCHHHHHHH
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTV---YLSQP----TYGN----H---PNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQD 182 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~V---li~~P----~y~~----~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 182 (280)
-+||..+..++ ..+ ...|..| +...| +|.. . .-.++..|+.++..... . ...-..+.|.++
T Consensus 7 ~SGGKDS~~Al--~~a-~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~-g-~~e~eve~L~~~ 81 (223)
T COG2102 7 YSGGKDSFYAL--YLA-LEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTS-G-EEEREVEELKEA 81 (223)
T ss_pred EecCcHHHHHH--HHH-HHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecC-c-cchhhHHHHHHH
Confidence 89999998777 554 4555322 22222 2221 1 22344678888777762 2 223457888888
Q ss_pred HhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCcee
Q 023599 183 LGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLP 225 (280)
Q Consensus 183 ~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~i 225 (280)
+..-. .-.++ +|.+.+..++.++-.+|++.|+-+
T Consensus 82 l~~l~--~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 82 LRRLK--VDGIV-------AGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred HHhCc--ccEEE-------EchhhhHHHHHHHHHHHHHhCCEE
Confidence 86542 22444 599999999999999999988764
No 480
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=37.36 E-value=2.9e+02 Score=24.34 Aligned_cols=78 Identities=17% Similarity=0.164 Sum_probs=39.5
Q ss_pred EEEeCCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHH
Q 023599 140 VYLSQPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMR 219 (280)
Q Consensus 140 Vli~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~ 219 (280)
|+...|+-+ +..+++.+|+..+ +.- ..+..+..++|.+++.+-..+ -+++++|-.|.+ ...++..++++
T Consensus 99 vVAv~~g~g-~~~lf~~~Gv~~v-i~g--gqt~nPS~~dl~~Ai~~~~a~-~VivLPNn~ni~------~aa~qa~~~~~ 167 (313)
T PF13684_consen 99 VVAVAPGEG-LAELFRSLGVDVV-ISG--GQTMNPSTEDLLNAIEKVGAD-EVIVLPNNKNII------LAAEQAARLSE 167 (313)
T ss_pred EEEEecCcc-HHHHHHhCCCeEE-EeC--CCCCCCCHHHHHHHHHhCCCC-eEEEEeCCchHH------HHHHHHHHHhc
Confidence 333334333 4666677775443 221 223456778888888763222 266663333333 23455556665
Q ss_pred hCCceeEEcc
Q 023599 220 LKRLLPFFDC 229 (280)
Q Consensus 220 ~~~~~ii~De 229 (280)
..+ +.+++-
T Consensus 168 ~~~-v~VipT 176 (313)
T PF13684_consen 168 DKN-VVVIPT 176 (313)
T ss_pred CCC-EEEEec
Confidence 445 445544
No 481
>PRK00024 hypothetical protein; Reviewed
Probab=37.24 E-value=1.1e+02 Score=25.51 Aligned_cols=53 Identities=17% Similarity=0.259 Sum_probs=28.5
Q ss_pred HHHHHHHhcCCCCcEEEEecCCCCCCCCC-CCHHHH---HHHHHHHHhCC-----ceeEEcccCCC
Q 023599 177 QGMLQDLGAAPSGAIVLLQASGHNPTGID-PTAQQW---EQIRQLMRLKR-----LLPFFDCAYQG 233 (280)
Q Consensus 177 ~~l~~~~~~~~~~~~~v~~~~p~NPTG~~-~~~~~l---~~i~~~~~~~~-----~~ii~De~y~~ 233 (280)
+-++.++..+. ..+++++|+ |+|.. .|.+|+ ++|.+.++--| .+||.++-|.-
T Consensus 156 ei~~~Al~~~A-~~iIl~HNH---PSG~~~PS~~D~~~T~~l~~a~~~l~I~llDHiIv~~~~~~S 217 (224)
T PRK00024 156 EIVKRALKLNA-AALILAHNH---PSGDPEPSQADILITKRLKEAGELLGIRLLDHIIIGDGEYVS 217 (224)
T ss_pred HHHHHHHHhhc-cceEEEecC---CCCCCCCCHHHHHHHHHHHHHHHhCCCEEeeEEEEcCCcEEE
Confidence 45666666553 245666644 45544 455665 34555555433 45666665533
No 482
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=36.93 E-value=2e+02 Score=25.72 Aligned_cols=69 Identities=10% Similarity=-0.039 Sum_probs=34.9
Q ss_pred CCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCcee
Q 023599 146 TYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLP 225 (280)
Q Consensus 146 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~i 225 (280)
.|..+..++....+.++.++..-+ .....+...++++.. + =|+..-|- ..+|.+++++.|+++|+.+
T Consensus 52 ~y~~~eell~d~Di~~V~ipt~~P--~~~H~e~a~~aL~aG-k---HVL~EKPl-------a~~Ea~el~~~A~~~g~~l 118 (343)
T TIGR01761 52 LYCEVEELPDDIDIACVVVRSAIV--GGQGSALARALLARG-I---HVLQEHPL-------HPRDIQDLLRLAERQGRRY 118 (343)
T ss_pred ccCCHHHHhcCCCEEEEEeCCCCC--CccHHHHHHHHHhCC-C---eEEEcCCC-------CHHHHHHHHHHHHHcCCEE
Confidence 566666666433344444432001 123345555555432 2 24444442 2467777777777777776
Q ss_pred EE
Q 023599 226 FF 227 (280)
Q Consensus 226 i~ 227 (280)
.+
T Consensus 119 ~v 120 (343)
T TIGR01761 119 LV 120 (343)
T ss_pred EE
Confidence 65
No 483
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=36.70 E-value=33 Score=22.14 Aligned_cols=33 Identities=15% Similarity=0.246 Sum_probs=21.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCceeEEcccC
Q 023599 199 HNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAY 231 (280)
Q Consensus 199 ~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y 231 (280)
..|.+.-.+.++++++.+-..+.+.+.+.+..|
T Consensus 26 ~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 26 KDPGGYDISLEELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp GGG--TT--HHHHHHHHHHHHHTTSEE--TTEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEE
Confidence 456677788999999998888777777777666
No 484
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=36.20 E-value=32 Score=23.79 Aligned_cols=27 Identities=11% Similarity=0.055 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhCCceeEEcccCCCccc
Q 023599 210 QWEQIRQLMRLKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 210 ~l~~i~~~~~~~~~~ii~De~y~~~~~ 236 (280)
.-++|.++|+++|+.++.|..-....+
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~LAr~L~ 54 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPDLVDVLL 54 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHHHHHHHH
Confidence 347889999999999999987644443
No 485
>PLN02417 dihydrodipicolinate synthase
Probab=36.15 E-value=2.8e+02 Score=23.83 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=21.4
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEccc
Q 023599 192 VLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCA 230 (280)
Q Consensus 192 ~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~ 230 (280)
+++.++|. -||..++.+.+++|+ +-.++.-|=|.+
T Consensus 128 i~lYn~P~-~tg~~l~~~~l~~l~---~~pni~giKdss 162 (280)
T PLN02417 128 TIIYNVPG-RTGQDIPPEVIFKIA---QHPNFAGVKECT 162 (280)
T ss_pred EEEEEChh-HhCcCCCHHHHHHHh---cCCCEEEEEeCC
Confidence 44544443 478889988777665 324566666653
No 486
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=36.14 E-value=50 Score=24.79 Aligned_cols=39 Identities=10% Similarity=0.163 Sum_probs=19.6
Q ss_pred HHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEE
Q 023599 177 QGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFF 227 (280)
Q Consensus 177 ~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~ 227 (280)
+.+++.+..++. +++++.-..| -++++++|+++++.|+.
T Consensus 72 ~~l~~l~~~~~P---~iIvt~~~~~---------p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 72 ERLEKLFSYNPP---CIIVTRGLEP---------PPELIELAEKYNIPLLR 110 (127)
T ss_dssp CHHHHHCTTT-S----EEEETTT------------HHHHHHHHHCT--EEE
T ss_pred HHHHHHhCCCCC---EEEEECcCCC---------CHHHHHHHHHhCCcEEE
Confidence 344444444433 5555544333 25678899999987764
No 487
>PRK06543 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=36.04 E-value=2.7e+02 Score=24.25 Aligned_cols=70 Identities=7% Similarity=0.097 Sum_probs=48.3
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCe
Q 023599 175 DFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGE 254 (280)
Q Consensus 175 d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 254 (280)
+++++++++..... ++.+-| ++++++++.+++.++... ++ ..+.-....+..+...+.+
T Consensus 202 slee~~ea~~~gaD---iImLDn--------~s~e~l~~av~~~~~~~~--le--------aSGgI~~~ni~~yA~tGVD 260 (281)
T PRK06543 202 RLDQIEPVLAAGVD---TIMLDN--------FSLDDLREGVELVDGRAI--VE--------ASGNVNLNTVGAIASTGVD 260 (281)
T ss_pred CHHHHHHHHhcCCC---EEEECC--------CCHHHHHHHHHHhCCCeE--EE--------EECCCCHHHHHHHHhcCCC
Confidence 68888888876555 777765 679999999998874431 11 1112234455777777889
Q ss_pred EEEEecccccc
Q 023599 255 CLVAQSYSKTM 265 (280)
Q Consensus 255 ~i~~~S~SK~~ 265 (280)
+|++++++.+.
T Consensus 261 ~Is~galths~ 271 (281)
T PRK06543 261 VISVGALTHSV 271 (281)
T ss_pred EEEeCccccCC
Confidence 99999998765
No 488
>PRK06483 dihydromonapterin reductase; Provisional
Probab=35.64 E-value=2.4e+02 Score=22.91 Aligned_cols=49 Identities=10% Similarity=-0.049 Sum_probs=24.6
Q ss_pred cccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 117 CLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
.+|++.++-... ...+...|.+|++..-.-......++..|......++
T Consensus 7 ItGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~ 55 (236)
T PRK06483 7 ITGAGQRIGLAL-AWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADF 55 (236)
T ss_pred EECCCChHHHHH-HHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCC
Confidence 556666555541 2334567877777654333333334445544433333
No 489
>PRK06381 threonine synthase; Validated
Probab=35.56 E-value=3e+02 Score=24.01 Aligned_cols=53 Identities=8% Similarity=0.096 Sum_probs=32.4
Q ss_pred CCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 110 NRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 110 ~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
..|+. .++|+.++.++ +.+ ...-.-.|+++...-..-...++.+|++++.++-
T Consensus 64 ~~lv~--aSsGN~g~alA--~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~ 117 (319)
T PRK06381 64 SGITV--GTCGNYGASIA--YFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDG 117 (319)
T ss_pred CEEEE--eCCcHHHHHHH--HHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCC
Confidence 34444 66778777777 333 2222245556554334456677889999998874
No 490
>COG0313 Predicted methyltransferases [General function prediction only]
Probab=35.05 E-value=2.4e+02 Score=24.42 Aligned_cols=22 Identities=18% Similarity=0.182 Sum_probs=13.7
Q ss_pred CCCCCChHHHHHHcCCeeeEEEe
Q 023599 144 QPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 144 ~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
||+|. ....+...|++++.+|-
T Consensus 93 DPG~~-LV~~a~~~gi~V~~lPG 114 (275)
T COG0313 93 DPGYE-LVRAAREAGIRVVPLPG 114 (275)
T ss_pred CccHH-HHHHHHHcCCcEEecCC
Confidence 45443 34455667888887775
No 491
>PHA02678 hypothetical protein; Provisional
Probab=34.73 E-value=89 Score=21.67 Aligned_cols=26 Identities=19% Similarity=0.129 Sum_probs=16.9
Q ss_pred HHHHHHHHHh----CCceeEEcccCCCccc
Q 023599 211 WEQIRQLMRL----KRLLPFFDCAYQGFVM 236 (280)
Q Consensus 211 l~~i~~~~~~----~~~~ii~De~y~~~~~ 236 (280)
..+|+..+.- -.+++++|..|++.-|
T Consensus 57 ~~qLl~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (89)
T PHA02678 57 AGQLAAVAAGAPAGVRVLVLVDVARCDMPF 86 (89)
T ss_pred HHHHHHhhcCCCCCcEEEEEEEeeeecCCc
Confidence 3444555442 3478999999987655
No 492
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=34.69 E-value=1.7e+02 Score=25.25 Aligned_cols=145 Identities=14% Similarity=0.080 Sum_probs=61.7
Q ss_pred cchHHHHHHHHHHhccCCCC----CCCCCCCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhc
Q 023599 60 LLLNAVRQAEQLLVNDLSAD----KEYLPITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHY 135 (280)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~----~~y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~ 135 (280)
...+..+...+.|....... ..|....|..+....+++.+...+ -++++ +.|...+..+. .. ..
T Consensus 12 ~~~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~~~------~DlIi--~~gt~aa~~~~---~~-~~ 79 (294)
T PF04392_consen 12 ALDDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKAQK------PDLII--AIGTPAAQALA---KH-LK 79 (294)
T ss_dssp HHHHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCCTS-------SEEE--EESHHHHHHHH---HH--S
T ss_pred HHHHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhcCC------CCEEE--EeCcHHHHHHH---Hh-cC
Confidence 34455555555555321111 224555677776666776654432 33444 77766654444 22 22
Q ss_pred CCCEEEEe---CCCCCChHHHHHHcCCeeeEEEeecCCCCCcCHHHHHHHHhcC-CCCcEEEEecCCCCCCCCCCCHHHH
Q 023599 136 YQHTVYLS---QPTYGNHPNFFAAAGLAMKTYHYYDPKTNGLDFQGMLQDLGAA-PSGAIVLLQASGHNPTGIDPTAQQW 211 (280)
Q Consensus 136 ~Gd~Vli~---~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~~v~~~~p~NPTG~~~~~~~l 211 (280)
..--|+.. +|.......-...-|..+..+-. . .+++...+.+.+- +..+.+.++-+++.++ +....
T Consensus 80 ~~iPVVf~~V~dp~~~~l~~~~~~~~~nvTGv~~--~----~~~~~~l~l~~~l~P~~k~igvl~~~~~~~----~~~~~ 149 (294)
T PF04392_consen 80 DDIPVVFCGVSDPVGAGLVDSLDRPGKNVTGVSE--R----PPIEKQLELIKKLFPDAKRIGVLYDPSEPN----SVAQI 149 (294)
T ss_dssp S-S-EEEECES-TTTTTS-S-SSS--SSEEEEEE---------HHHHHHHHHHHSTT--EEEEEEETT-HH----HHHHH
T ss_pred CCcEEEEEeccChhhhhccccccCCCCCEEEEEC--C----cCHHHHHHHHHHhCCCCCEEEEEecCCCcc----HHHHH
Confidence 21233332 35443333222222344555442 1 2344433333321 2222343444455443 35667
Q ss_pred HHHHHHHHhCCceeE
Q 023599 212 EQIRQLMRLKRLLPF 226 (280)
Q Consensus 212 ~~i~~~~~~~~~~ii 226 (280)
+.+.+.++++|+-++
T Consensus 150 ~~~~~~a~~~g~~l~ 164 (294)
T PF04392_consen 150 EQLRKAAKKLGIELV 164 (294)
T ss_dssp HHHHHHHHHTT-EEE
T ss_pred HHHHHHHHHcCCEEE
Confidence 888888888887655
No 493
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=34.64 E-value=30 Score=30.29 Aligned_cols=29 Identities=10% Similarity=-0.015 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHH-hCCceeEEcccCCCccc
Q 023599 208 AQQWEQIRQLMR-LKRLLPFFDCAYQGFVM 236 (280)
Q Consensus 208 ~~~l~~i~~~~~-~~~~~ii~De~y~~~~~ 236 (280)
..++++|++||. .++.+||.||++..=..
T Consensus 158 ~sRl~ql~~W~g~dfdgvivfDEcH~akn~ 187 (303)
T PF13872_consen 158 RSRLDQLVDWCGEDFDGVIVFDECHKAKNL 187 (303)
T ss_pred cchHHHHHHHHhcCCCceEEeccchhcCCC
Confidence 467899999995 47889999999955444
No 494
>KOG0384 consensus Chromodomain-helicase DNA-binding protein [Transcription]
Probab=34.37 E-value=2.2e+02 Score=30.10 Aligned_cols=117 Identities=10% Similarity=0.127 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHHhhcCCCEEEEeCCCCCChHHH---HHHcCC----ee
Q 023599 89 PEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLAKHYYQHTVYLSQPTYGNHPNF---FAAAGL----AM 161 (280)
Q Consensus 89 ~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~~~~~Gd~Vli~~P~y~~~~~~---~~~~G~----~~ 161 (280)
-++|++..++++..++ ++-++++-|-.|-=+|+++ .-|+|+|.+..|.+-..+ ++.+.+ .|
T Consensus 735 gelRq~AIDhFnap~S----ddFvFLLSTRAGGLGINLa--------tADTVIIFDSDWNPQNDLQAqARaHRIGQkk~V 802 (1373)
T KOG0384|consen 735 GELRQQAIDHFNAPDS----DDFVFLLSTRAGGLGINLA--------TADTVIIFDSDWNPQNDLQAQARAHRIGQKKHV 802 (1373)
T ss_pred hHHHHHHHHhccCCCC----CceEEEEecccCccccccc--------ccceEEEeCCCCCcchHHHHHHHHHhhcccceE
Confidence 4799999999877664 2555555565555556655 229999999999775443 333322 23
Q ss_pred eEEEeecCCCCCcCHHHHHHHHhcCCCCcEEE--EecCCCCCCCCCCCHHHHHHHHHHHH
Q 023599 162 KTYHYYDPKTNGLDFQGMLQDLGAAPSGAIVL--LQASGHNPTGIDPTAQQWEQIRQLMR 219 (280)
Q Consensus 162 ~~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~v--~~~~p~NPTG~~~~~~~l~~i~~~~~ 219 (280)
.-|.+.-.+ .+.-+-|+++=.+-.=..++| +..+-.+--+.-++.+++.+|+++-.
T Consensus 803 nVYRLVTk~--TvEeEilERAk~KmvLD~aVIQ~m~t~~~~s~~~~f~K~ELsaILKfGA 860 (1373)
T KOG0384|consen 803 NVYRLVTKN--TVEEEILERAKLKMVLDHAVIQRMDTKGKTSKSNPFSKEELSAILKFGA 860 (1373)
T ss_pred EEEEEecCC--chHHHHHHHHHHHhhhHHHHHHhhccccccCCCCCCCHHHHHHHHHhch
Confidence 333432111 233333333321110000000 11134455566689999999988765
No 495
>PRK11761 cysM cysteine synthase B; Provisional
Probab=34.03 E-value=3.1e+02 Score=23.75 Aligned_cols=47 Identities=11% Similarity=0.118 Sum_probs=31.5
Q ss_pred cccchhHHHHHHHHHHhhcCC--CEEEEeCCCCCChHHHHHHcCCeeeEEEe
Q 023599 117 CLSGSGSLRIGADFLAKHYYQ--HTVYLSQPTYGNHPNFFAAAGLAMKTYHY 166 (280)
Q Consensus 117 t~g~~~al~~~~~~~~~~~~G--d~Vli~~P~y~~~~~~~~~~G~~~~~v~~ 166 (280)
.++|+.+..++ +.+. ..| -.|++|.-.-..-...++.+|++++.++-
T Consensus 69 aSsGN~g~alA--~~a~-~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 69 ATSGNTGIALA--MIAA-IKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred eCCChHHHHHH--HHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 88888888888 4432 234 35555543334556777889999999874
No 496
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=33.74 E-value=1e+02 Score=26.98 Aligned_cols=51 Identities=18% Similarity=0.296 Sum_probs=0.0
Q ss_pred EeecCCCCCcCHHHHHHHHh---cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh
Q 023599 165 HYYDPKTNGLDFQGMLQDLG---AAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRL 220 (280)
Q Consensus 165 ~~~~~~~~~~d~~~l~~~~~---~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~ 220 (280)
|+ .+++.+|.+.+++.++ ++..+.++++-++--+|| ++.+|.+++++.+.+
T Consensus 15 PF--~~dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~---Ls~eEr~~v~~~~v~ 68 (299)
T COG0329 15 PF--DEDGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPT---LTLEERKEVLEAVVE 68 (299)
T ss_pred CC--CCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchh---cCHHHHHHHHHHHHH
No 497
>PRK06382 threonine dehydratase; Provisional
Probab=33.48 E-value=3.1e+02 Score=25.04 Aligned_cols=76 Identities=16% Similarity=0.048 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHHHHHhCCCCccccCCCeEEeecccchhHHHHHHHHHH-hhcCCCEEEEeCCCCCChHHHHHHcCCeeeE
Q 023599 85 ITGLPEFNKLSAKLIFGADSPAIKENRVSTVQCLSGSGSLRIGADFLA-KHYYQHTVYLSQPTYGNHPNFFAAAGLAMKT 163 (280)
Q Consensus 85 ~~G~~~lr~~ia~~l~~~~~~~~~~~~i~~v~t~g~~~al~~~~~~~~-~~~~Gd~Vli~~P~y~~~~~~~~~~G~~~~~ 163 (280)
+.|....|-+......-.... ....++. +++|+.+..++ +.+ .+.---.|++|.-.-..-...++.+|++++.
T Consensus 51 ptGSfK~Rga~~~i~~~~~~~--~~~gvv~--aSsGN~g~a~A--~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~ 124 (406)
T PRK06382 51 KTGSFKSRGAVFKFSKLSEDE--LRNGVIT--ASAGNHAQGVA--YAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVIL 124 (406)
T ss_pred CCCCCHHHHHHHHHHhcchhc--cCCeEEE--ECCCHHHHHHH--HHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEE
Confidence 356666676654442111100 0133554 88888888877 443 2232246666655444456677889999986
Q ss_pred EEe
Q 023599 164 YHY 166 (280)
Q Consensus 164 v~~ 166 (280)
++-
T Consensus 125 ~~~ 127 (406)
T PRK06382 125 TGR 127 (406)
T ss_pred ECC
Confidence 653
No 498
>PRK10206 putative oxidoreductase; Provisional
Probab=33.45 E-value=2.1e+02 Score=25.44 Aligned_cols=19 Identities=21% Similarity=0.151 Sum_probs=9.3
Q ss_pred CHHHHHHHHHHHHhCCcee
Q 023599 207 TAQQWEQIRQLMRLKRLLP 225 (280)
Q Consensus 207 ~~~~l~~i~~~~~~~~~~i 225 (280)
+.++.++|+++|+++++.+
T Consensus 100 ~~~ea~~l~~~a~~~~~~l 118 (344)
T PRK10206 100 TLAEAKELFALAKSKGLTV 118 (344)
T ss_pred CHHHHHHHHHHHHHhCCEE
Confidence 3444555555555554443
No 499
>PRK06106 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=33.45 E-value=2.4e+02 Score=24.54 Aligned_cols=70 Identities=9% Similarity=0.055 Sum_probs=47.8
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhCCceeEEcccCCCcccCcCCChhHHHHhhhcCCe
Q 023599 175 DFQGMLQDLGAAPSGAIVLLQASGHNPTGIDPTAQQWEQIRQLMRLKRLLPFFDCAYQGFVMNMDADALPVRMFVADGGE 254 (280)
Q Consensus 175 d~~~l~~~~~~~~~~~~~v~~~~p~NPTG~~~~~~~l~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 254 (280)
++++++++++.... ++.+-| ++++++++.+++.+.... + |+-+. -....+..+...+.+
T Consensus 203 tleea~ea~~~gaD---iI~LDn--------~s~e~l~~av~~~~~~~~--l--eaSGG------I~~~ni~~yA~tGVD 261 (281)
T PRK06106 203 TLDQLEEALELGVD---AVLLDN--------MTPDTLREAVAIVAGRAI--T--EASGR------ITPETAPAIAASGVD 261 (281)
T ss_pred CHHHHHHHHHcCCC---EEEeCC--------CCHHHHHHHHHHhCCCce--E--EEECC------CCHHHHHHHHhcCCC
Confidence 57888888876555 777755 568999999998764432 1 22222 233455777777889
Q ss_pred EEEEecccccc
Q 023599 255 CLVAQSYSKTM 265 (280)
Q Consensus 255 ~i~~~S~SK~~ 265 (280)
+|.+++++.+-
T Consensus 262 ~Is~Galthsa 272 (281)
T PRK06106 262 LISVGWLTHSA 272 (281)
T ss_pred EEEeChhhcCC
Confidence 99999998754
No 500
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=33.41 E-value=76 Score=27.50 Aligned_cols=19 Identities=11% Similarity=0.038 Sum_probs=9.5
Q ss_pred CCCCCCHHHHHHHHHHHHh
Q 023599 202 TGIDPTAQQWEQIRQLMRL 220 (280)
Q Consensus 202 TG~~~~~~~l~~i~~~~~~ 220 (280)
=+..++.+|++++++.+.+
T Consensus 46 E~~~Ls~eEr~~l~~~~~~ 64 (289)
T cd00951 46 EFFSLTPDEYAQVVRAAVE 64 (289)
T ss_pred CcccCCHHHHHHHHHHHHH
Confidence 3344555555555554443
Done!