BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023601
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGQ6|EB1C_ARATH Microtubule-associated protein RP/EB family member 1C
OS=Arabidopsis thaliana GN=EB1C PE=1 SV=1
Length = 329
Score = 362 bits (929), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/294 (66%), Positives = 225/294 (76%), Gaps = 27/294 (9%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD+ HPG VPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEV+KL+KGRPLDNLEF
Sbjct: 47 MDSVHPGTVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEF 106
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQ--STNKGVTAAPKAQSSH 118
MQWMK+YCDSVNGG H+Y+ LERRE+ KGGKEA+K++A++Q + +A P+ SS+
Sbjct: 107 MQWMKKYCDSVNGGQ-HNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSN 165
Query: 119 NARRHDVTSVNPTTQASKT------SKPSAV----VPAYDEQITELKLSVDSLEKERDFY 168
R+H+ S N T S T SKPSA VPAYDE+ITELKL +DSLEKERDFY
Sbjct: 166 GTRKHEPQSNNTGTHHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFY 225
Query: 169 FAKLRDIEILCQSPGIEHLPIVGAIKRILYATDDDASVVAEAQAMVFHQQKEAEPLSPIA 228
F+KLRD+EILCQ+P EHLP+VG+IKRILYA D + AE Q LSPIA
Sbjct: 226 FSKLRDVEILCQNPDTEHLPLVGSIKRILYAADGEDVGAAETQT-----------LSPIA 274
Query: 229 EVSEERTSS--ETQKRKNIVNVDVDTAGITTLSPRQRLSDVSDVHCSG-SPLMT 279
E SEER +S E+QKRK IVN+DVD A ITTLSPRQRLSD SDV CSG SPL+T
Sbjct: 275 EGSEERRNSVTESQKRKLIVNLDVDVAAITTLSPRQRLSDASDVKCSGSSPLLT 328
>sp|Q7XJ60|EB1A_ARATH Microtubule-associated protein RP/EB family member 1A
OS=Arabidopsis thaliana GN=EB1A PE=1 SV=1
Length = 276
Score = 244 bits (622), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 161/213 (75%), Gaps = 13/213 (6%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
+D T PG+VPMHKVNFDAK+EY+MIQNYKVLQDVFNKLKITK +E+N+L+KGRPLDNLEF
Sbjct: 47 LDMTFPGVVPMHKVNFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEF 106
Query: 61 MQWMKRYCDSVNGGLIH-SYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKA-QSSH 118
+QW+KR+CDS+NGG+++ +YNP+ERR + GKE S KG PK+ Q+++
Sbjct: 107 LQWLKRFCDSINGGIMNENYNPVERR--SRNGKERSV---------KGSNKIPKSLQTNN 155
Query: 119 NARRHDVTSVNPTTQASKTSKPSAVVPAYDEQITELKLSVDSLEKERDFYFAKLRDIEIL 178
N + +SV + + S +A V A +++ +LK+S D LEKERDFYF+KLRD+EIL
Sbjct: 156 NHPPPNSSSVGLSKASGPKSAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEIL 215
Query: 179 CQSPGIEHLPIVGAIKRILYATDDDASVVAEAQ 211
CQ+P ++ LPIV A+K+ILYATD + S + +AQ
Sbjct: 216 CQTPELDDLPIVVAVKKILYATDANESALEDAQ 248
>sp|Q9FJJ5|EB1B_ARATH Microtubule-associated protein RP/EB family member 1B
OS=Arabidopsis thaliana GN=EB1B PE=1 SV=1
Length = 293
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 161/220 (73%), Gaps = 20/220 (9%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
+D T PG+VPMHKVNF+AK+EYEMIQNYKV+Q+VF KLKITK +EVN+L+KGRPLDNLEF
Sbjct: 47 LDMTFPGVVPMHKVNFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEF 106
Query: 61 MQWMKRYCDSVNGGLIH-SYNPLERRESCKGGKE-----ASKKSASSQSTNKG---VTAA 111
+QW+KR+CDS+NGG+++ +YNP+ERR +GG+E +SK S S Q+ N V +
Sbjct: 107 LQWLKRFCDSINGGIMNENYNPVERRS--RGGREKSVKGSSKISKSLQTNNMHHPPVATS 164
Query: 112 PKAQSSHNARRHDVTSVNPTTQASKTSKPSAVVPAYDEQITELKLSVDSLEKERDFYFAK 171
K A+ H + S SA V A +++ +LK+SVD LEKERDFYF+K
Sbjct: 165 NKPAGPKQAKSHGIGG---------GSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSK 215
Query: 172 LRDIEILCQSPGIEHLPIVGAIKRILYATDDDASVVAEAQ 211
LRDIEILCQ+P ++ LPIV A+K+ILYATD + SV+ EAQ
Sbjct: 216 LRDIEILCQTPELDDLPIVVAVKKILYATDANESVLEEAQ 255
>sp|Q9UPY8|MARE3_HUMAN Microtubule-associated protein RP/EB family member 3 OS=Homo
sapiens GN=MAPRE3 PE=1 SV=1
Length = 281
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 117/218 (53%), Gaps = 21/218 (9%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG V + KV F AK E+E I N+KVLQ F K+ + K I V KL+KG+ DN EF
Sbjct: 48 MDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKG----VTAAPKAQS 116
+QW K++ D+ G YNPL R+ G A + Q NK TA P+ S
Sbjct: 108 IQWFKKFFDANYDG--KDYNPLLARQ---GQDVAPPPNPGDQIFNKSKKLIGTAVPQRTS 162
Query: 117 SHNARRHD------------VTSVNPTTQASKTSKPSAVVPAYDEQITELKLSVDSLEKE 164
+ + NP + + + A + ++Q+ +LKL+VD LEKE
Sbjct: 163 PTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDGLEKE 222
Query: 165 RDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDD 202
RDFYF+KLRDIE++CQ E+ P++ I ILYAT++
Sbjct: 223 RDFYFSKLRDIELICQEHESENSPVISGIIGILYATEE 260
>sp|Q5XIT1|MARE3_RAT Microtubule-associated protein RP/EB family member 3 OS=Rattus
norvegicus GN=Mapre3 PE=1 SV=1
Length = 281
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 117/218 (53%), Gaps = 21/218 (9%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG V + KV F AK E+E I N+KVLQ F K+ + K I V KL+KG+ DN EF
Sbjct: 48 MDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKG----VTAAPKAQS 116
+QW K++ D+ G YNPL R+ G A + Q NK TA P+ S
Sbjct: 108 IQWFKKFFDANYDG--KDYNPLLARQ---GQDVAPPPNPGDQIFNKSKKLIGTAVPQRTS 162
Query: 117 SHNARRHD------------VTSVNPTTQASKTSKPSAVVPAYDEQITELKLSVDSLEKE 164
+ + NP + + + A + ++Q+ +LKL+VD LEKE
Sbjct: 163 PTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHEADAQILELNQQLLDLKLTVDGLEKE 222
Query: 165 RDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDD 202
RDFYF+KLRDIE++CQ E+ P++ I ILYAT++
Sbjct: 223 RDFYFSKLRDIELICQEHESENSPVISGIIGILYATEE 260
>sp|Q6PER3|MARE3_MOUSE Microtubule-associated protein RP/EB family member 3 OS=Mus
musculus GN=Mapre3 PE=1 SV=1
Length = 281
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 117/218 (53%), Gaps = 21/218 (9%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG V + KV F AK E+E I N+KVLQ F K+ + K I V KL+KG+ DN EF
Sbjct: 48 MDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKG----VTAAPKAQS 116
+QW K++ D+ G YNPL R+ G A + Q NK TA P+ S
Sbjct: 108 IQWFKKFFDANYDG--KDYNPLLARQ---GQDVAPPPNPGDQIFNKSKKLIGTAVPQRTS 162
Query: 117 SHNARRHD------------VTSVNPTTQASKTSKPSAVVPAYDEQITELKLSVDSLEKE 164
+ + NP + + + A + ++Q+ +LKL+VD LEKE
Sbjct: 163 PTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHEADAQILELNQQLLDLKLTVDGLEKE 222
Query: 165 RDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDD 202
RDFYF+KLRDIE++CQ E+ P++ I ILYAT++
Sbjct: 223 RDFYFSKLRDIELICQEHESENSPVISGIIGILYATEE 260
>sp|Q66T82|MARE1_COTJA Microtubule-associated protein RP/EB family member 1 OS=Coturnix
coturnix japonica GN=MAPRE1 PE=2 SV=1
Length = 263
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG V + KV F AK E+E IQN+KVLQ F ++ + K I V+KL+KG+ DN EF
Sbjct: 48 MDMLFPGSVALKKVKFQAKLEHEYIQNFKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKAQSSHNA 120
+QW K++ D+ G Y+P+ R+ G+E + + NK P S
Sbjct: 108 VQWFKKFFDANYDG--KEYDPVAARQ----GQETVAPNLVAPVMNK--PKKPLGTGSAGP 159
Query: 121 RRHDVTSVNPTTQASKTSKPSAVV-----PAYDEQITELKLSVDSLEKERDFYFAKLRDI 175
+R V P T T EQI LKL+V+ LEKERDFYF KLR+I
Sbjct: 160 QRPIVAQRTPATPKGGTGMVKKAAGDDESAGLIEQINVLKLTVEDLEKERDFYFGKLRNI 219
Query: 176 EILCQSPGIEHLPIVGAIKRILYATDD 202
E++CQ E+ P++ I ILYATD+
Sbjct: 220 ELICQENEGENDPVLQRIVEILYATDE 246
>sp|Q6V291|MARE1_COTCO Microtubule-associated protein RP/EB family member 1 OS=Coturnix
coturnix GN=MAPRE1 PE=2 SV=1
Length = 263
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG V + KV F AK E+E IQN+KVLQ F ++ + K I V+KL+KG+ DN EF
Sbjct: 48 MDMLFPGSVALKKVKFQAKLEHEYIQNFKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKAQSSHNA 120
+QW K++ D+ G Y+P+ R+ G+E + + NK P S
Sbjct: 108 VQWFKKFFDANYDG--KEYDPVAARQ----GQETVAPNLVAPVMNK--PKKPLGTGSAAP 159
Query: 121 RRHDVTSVNPTTQASKTSKPSAVV-----PAYDEQITELKLSVDSLEKERDFYFAKLRDI 175
+R V P T T EQI LKL+V+ LEKERDFYF KLR+I
Sbjct: 160 QRPIVAQRTPATPKGGTGMVKKAAGDDESAGLIEQINVLKLTVEDLEKERDFYFGKLRNI 219
Query: 176 EILCQSPGIEHLPIVGAIKRILYATDD 202
E++CQ E+ P++ I ILYATD+
Sbjct: 220 ELICQENEGENDPVLQRIVEILYATDE 246
>sp|Q6P848|MARE1_XENTR Microtubule-associated protein RP/EB family member 1 OS=Xenopus
tropicalis GN=mapre1 PE=2 SV=1
Length = 269
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 120/215 (55%), Gaps = 23/215 (10%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG V + KV F AK E+E IQN+KVLQ F K+ + K I V+KL+KG+ DN EF
Sbjct: 48 MDMLFPGSVVLKKVKFQAKLEHEYIQNFKVLQAGFKKMGVDKIIPVDKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNK-------GVTAAPK 113
+QW K++ D+ G Y+P+ R+ G + A ++ NK G TA
Sbjct: 108 VQWFKKFFDANYDG--KDYDPVAARQ---GQESAPVPVLAAPVLNKPKKPLGSGNTA--- 159
Query: 114 AQSSHNARRHDVTSVNPTTQASKTSKPSAVVPAYDE------QITELKLSVDSLEKERDF 167
Q + +R V++ P SK KP+ V DE QI LK++V+ LEKERDF
Sbjct: 160 PQRTVPVQRTAVSNKPPAQGISK--KPATVGNGDDESAELIQQINVLKITVEDLEKERDF 217
Query: 168 YFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDD 202
YF KLR+IE++CQ E P++ I ILYATD+
Sbjct: 218 YFGKLRNIELICQENEGESDPVLQRIIEILYATDE 252
>sp|Q5ZLC7|MARE1_CHICK Microtubule-associated protein RP/EB family member 1 OS=Gallus
gallus GN=MAPRE1 PE=2 SV=1
Length = 258
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 113/203 (55%), Gaps = 10/203 (4%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG V + KV F AK E+E IQN+KVLQ F ++ + K I V+KL+KG+ DN EF
Sbjct: 48 MDMLFPGSVALKKVKFQAKLEHEYIQNFKVLQAGFKRMGVDKIIPVDKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKA-QSSHN 119
+QW K++ D+ G Y+P+ R+ G+E + + NK P A Q
Sbjct: 108 VQWFKKFFDANYDG--KEYDPVAARQ----GQETVAPNLVAPVVNK--PKKPLAPQRPIV 159
Query: 120 ARRHDVTSVNPTTQASKTSKPSAVVPAYDEQITELKLSVDSLEKERDFYFAKLRDIEILC 179
A+R T T K + EQI LKL+V+ LEKERDFYF KLR+IE++C
Sbjct: 160 AQRTPATPKGSTGMVKKAAGDDESA-GLIEQINVLKLTVEDLEKERDFYFGKLRNIELIC 218
Query: 180 QSPGIEHLPIVGAIKRILYATDD 202
Q E+ P++ I ILYATD+
Sbjct: 219 QENEGENDPVLQRIVEILYATDE 241
>sp|Q3ZBD9|MARE1_BOVIN Microtubule-associated protein RP/EB family member 1 OS=Bos taurus
GN=MAPRE1 PE=2 SV=3
Length = 268
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 116/211 (54%), Gaps = 16/211 (7%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E IQN+K+LQ F ++ + K I V+KL+KG+ DN EF
Sbjct: 48 MDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKAQSSHNA 120
+QW K++ D+ G Y+P+ R+ G + A S + + NK P + SS
Sbjct: 108 VQWFKKFFDANYDG--KEYDPVAARQ---GQETAMAPSLVAPALNK--PKKPLSSSSAAP 160
Query: 121 RRHDV---TSVNPTTQASKTSKPSAVVPAYDE------QITELKLSVDSLEKERDFYFAK 171
+R T+ P K V DE Q+ LKL+V+ LEKERDFYF K
Sbjct: 161 QRPITTHRTTATPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGK 220
Query: 172 LRDIEILCQSPGIEHLPIVGAIKRILYATDD 202
LR+IE++CQ E+ P++ I ILYATD+
Sbjct: 221 LRNIELICQENEGENNPVLQRIVDILYATDE 251
>sp|Q5R7Z5|MARE1_PONAB Microtubule-associated protein RP/EB family member 1 OS=Pongo
abelii GN=MAPRE1 PE=2 SV=3
Length = 268
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 116/211 (54%), Gaps = 16/211 (7%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E IQN+K+LQ F ++ + K I V+KL+KG+ DN EF
Sbjct: 48 MDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKAQSSHNA 120
+QW K++ D+ G Y+P+ R+ G + A S + + NK P + SS
Sbjct: 108 VQWFKKFFDANYDG--KDYDPVAARQ---GQETAVAPSLVAPALNK--PKKPLSSSSAAP 160
Query: 121 RR---HDVTSVNPTTQASKTSKPSAVVPAYDE------QITELKLSVDSLEKERDFYFAK 171
+R T+ P K V DE Q+ LKL+V+ LEKERDFYF K
Sbjct: 161 QRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGK 220
Query: 172 LRDIEILCQSPGIEHLPIVGAIKRILYATDD 202
LR+IE++CQ E+ P++ I ILYATD+
Sbjct: 221 LRNIELICQENEGENDPVLQRIVDILYATDE 251
>sp|Q15691|MARE1_HUMAN Microtubule-associated protein RP/EB family member 1 OS=Homo
sapiens GN=MAPRE1 PE=1 SV=3
Length = 268
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 115/211 (54%), Gaps = 16/211 (7%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E IQN+K+LQ F ++ + K I V+KL+KG+ DN EF
Sbjct: 48 MDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKAQSSHNA 120
+QW K++ D+ G Y+P+ R+ G + A S + + NK P SS
Sbjct: 108 VQWFKKFFDANYDG--KDYDPVAARQ---GQETAVAPSLVAPALNK--PKKPLTSSSAAP 160
Query: 121 RR---HDVTSVNPTTQASKTSKPSAVVPAYDE------QITELKLSVDSLEKERDFYFAK 171
+R T+ P K V DE Q+ LKL+V+ LEKERDFYF K
Sbjct: 161 QRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGK 220
Query: 172 LRDIEILCQSPGIEHLPIVGAIKRILYATDD 202
LR+IE++CQ E+ P++ I ILYATD+
Sbjct: 221 LRNIELICQENEGENDPVLQRIVDILYATDE 251
>sp|Q61166|MARE1_MOUSE Microtubule-associated protein RP/EB family member 1 OS=Mus
musculus GN=Mapre1 PE=1 SV=3
Length = 268
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 115/211 (54%), Gaps = 16/211 (7%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E IQN+K+LQ F ++ + K I V+KL+KG+ DN EF
Sbjct: 48 MDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGV---TAAPKAQSS 117
+QW K++ D+ G Y+P+ R+ + S + + K + TAAP Q
Sbjct: 108 VQWFKKFFDANYDG--KEYDPVAARQGQETAVAPSLVAPALSKPKKPLGSSTAAP--QRP 163
Query: 118 HNARRHDVTSVNPTTQASKTSKPSAVVPAYDE------QITELKLSVDSLEKERDFYFAK 171
+R T+ P K V DE Q+ LKL+V+ LEKERDFYF K
Sbjct: 164 IATQR---TTAAPKAGPGMVRKNPGVGNGDDEAAELMQQVKVLKLTVEDLEKERDFYFGK 220
Query: 172 LRDIEILCQSPGIEHLPIVGAIKRILYATDD 202
LR+IE++CQ E+ P++ I ILYATD+
Sbjct: 221 LRNIELICQENEGENDPVLQRIVDILYATDE 251
>sp|Q66HR2|MARE1_RAT Microtubule-associated protein RP/EB family member 1 OS=Rattus
norvegicus GN=Mapre1 PE=1 SV=3
Length = 268
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 38/222 (17%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E IQN+K+LQ F ++ + K I V+KL+KG+ DN EF
Sbjct: 48 MDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEF 107
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRES--------------------CKGGKEASKKSAS 100
+QW K++ D+ G Y+P+ R+ G A ++ +
Sbjct: 108 VQWFKKFFDANYDG--KEYDPVAARQGQETAVAPSLVAPALSKPKKPLGSGSAAPQRPIA 165
Query: 101 SQSTNKGVTAAPKAQSSHNARRHDVTSVNPTTQASKTSKPSAVVPAYDEQITELKLSVDS 160
+Q T TAAPKA R + N +A++ +Q+ LKL+V+
Sbjct: 166 TQRT----TAAPKA--GPGMVRKNPGMGNGDDEAAELM----------QQVKVLKLTVED 209
Query: 161 LEKERDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDD 202
LEKERDFYF KLR+IE++CQ E+ P++ I ILYATD+
Sbjct: 210 LEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDE 251
>sp|Q8R001|MARE2_MOUSE Microtubule-associated protein RP/EB family member 2 OS=Mus
musculus GN=Mapre2 PE=1 SV=1
Length = 326
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 121/232 (52%), Gaps = 30/232 (12%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E I N+K+LQ F ++ + K I V KL+KGR DNL+F
Sbjct: 90 MDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDF 149
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKAQSSHNA 120
+QW K++ D+ G Y+P+E R+ G++A + + PK N+
Sbjct: 150 IQWFKKFYDANYDG--KEYDPVEARQ----GQDAIPPPDPGEQ----IFNLPKKSHHANS 199
Query: 121 RRHDVTSVNPTTQASKT-SKPSAV-------------------VPAYDEQITELKLSVDS 160
+P ++ T S+PS+ V +EQ+ LKL+++
Sbjct: 200 PTAGAAKSSPASKPGSTPSRPSSAKRASSSGSASRSDKDLETQVIQLNEQVHSLKLALEG 259
Query: 161 LEKERDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDDDASVVAEAQA 212
+EKERDFYF KLR+IE+LCQ G E+ +V + +LYA+D+ E +A
Sbjct: 260 VEKERDFYFGKLREIELLCQEHGQENDDLVQRLMEVLYASDEQEGQTEEPEA 311
>sp|Q3B8Q0|MARE2_RAT Microtubule-associated protein RP/EB family member 2 OS=Rattus
norvegicus GN=Mapre2 PE=2 SV=1
Length = 326
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E I N+K+LQ F ++ + K I V KL+KGR DNL+F
Sbjct: 90 MDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDF 149
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEA-------------SKKSASSQSTNKG 107
+QW K++ D+ G Y+P+E R+ G++A KKS + S G
Sbjct: 150 IQWFKKFYDANYDG--KEYDPVEARQ----GQDAIPPPDPGEQIFNLPKKSHHANSPTAG 203
Query: 108 VT-AAPKAQSSHNARRHDVTSVNPTTQASKTSKP--SAVVPAYDEQITELKLSVDSLEKE 164
++P A+ R ++ ++ S V +EQ+ LKL+++ +EKE
Sbjct: 204 AAKSSPAAKPGSTPSRPSSAKRASSSGSASRSDKDLETQVIQLNEQVHSLKLALEGVEKE 263
Query: 165 RDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDDDASVVAEAQ 211
RDFYF KLR+IE+LCQ G E+ +V + +LYA+D+ E +
Sbjct: 264 RDFYFGKLREIELLCQEHGQENDDLVQRLMEVLYASDEQEGQTEEPE 310
>sp|Q15555|MARE2_HUMAN Microtubule-associated protein RP/EB family member 2 OS=Homo
sapiens GN=MAPRE2 PE=1 SV=1
Length = 327
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 122/228 (53%), Gaps = 22/228 (9%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E I N+K+LQ F ++ + K I V KL+KGR DNL+F
Sbjct: 91 MDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDF 150
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEA-------------SKKSASSQSTNKG 107
+QW K++ D+ G Y+P+E R+ G++A KKS + S G
Sbjct: 151 IQWFKKFYDANYDG--KEYDPVEARQ----GQDAIPPPDPGEQIFNLPKKSHHANSPTAG 204
Query: 108 VT-AAPKAQSSHNARRHDVTSVNPTTQASKTSKP--SAVVPAYDEQITELKLSVDSLEKE 164
++P A+ R ++ ++ S V +EQ+ LKL+++ +EKE
Sbjct: 205 AAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDLETQVIQLNEQVHSLKLALEGVEKE 264
Query: 165 RDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDDDASVVAEAQA 212
RDFYF KLR+IE+LCQ G E+ +V + ILYA+++ E +A
Sbjct: 265 RDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEA 312
>sp|Q5R4I6|MARE2_PONAB Microtubule-associated protein RP/EB family member 2 OS=Pongo
abelii GN=MAPRE2 PE=2 SV=1
Length = 327
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 122/228 (53%), Gaps = 22/228 (9%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E I N+K+LQ F ++ + K I V KL+KGR DNL+F
Sbjct: 91 MDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDF 150
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEA-------------SKKSASSQSTNKG 107
+QW K++ D+ G Y+P+E R+ G++A KKS + S G
Sbjct: 151 IQWFKKFYDANYDG--KEYDPVEARQ----GQDAIPPPDPGEQIFNLPKKSHHANSPTAG 204
Query: 108 VT-AAPKAQSSHNARRHDVTSVNPTTQASKTSKP--SAVVPAYDEQITELKLSVDSLEKE 164
++P A+ R ++ ++ S V +EQ+ LKL+++ +EKE
Sbjct: 205 AAKSSPAAKPGSTPSRPSSAKRASSSGSASRSDKDLETQVIQLNEQVHSLKLALEGVEKE 264
Query: 165 RDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDDDASVVAEAQA 212
RDFYF KLR+IE+LCQ G E+ +V + +LYA+++ E +A
Sbjct: 265 RDFYFGKLREIELLCQEHGQENDDLVQRLMDVLYASEEHEGHTEEPEA 312
>sp|Q7ZXP1|MARE2_XENLA Microtubule-associated protein RP/EB family member 2 OS=Xenopus
laevis GN=mapre2 PE=2 SV=1
Length = 327
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 117/220 (53%), Gaps = 21/220 (9%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E I N+K+LQ F ++ + K I V KL+KGR DNL+F
Sbjct: 90 MDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDF 149
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEA-------------SKKSASSQSTNKG 107
+QW K++ D+ G Y+P+E R+ G++A KK + S G
Sbjct: 150 IQWFKKFFDANYDG--KEYDPMEARQ----GQDALPPPDPGEQIFNLPKKPHHANSPTAG 203
Query: 108 VT-AAPKAQ-SSHNARRHDVTSVNPTTQASKTSKPSAVVPAYDEQITELKLSVDSLEKER 165
++P A+ S ++R P V +EQ+ LK++++ +EKER
Sbjct: 204 AARSSPIAKPGSTSSRPSSAKKAVPCPSVKSDKDLETQVSHLNEQVHSLKIALEGVEKER 263
Query: 166 DFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDDDAS 205
DFYF KLR+IE+LCQ G E ++ + ILY++++ S
Sbjct: 264 DFYFGKLREIELLCQEHGQEGDDLLQRLMDILYSSEEQES 303
>sp|Q3SZP2|MARE2_BOVIN Microtubule-associated protein RP/EB family member 2 OS=Bos taurus
GN=MAPRE2 PE=2 SV=1
Length = 326
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 30/221 (13%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E I N+K+LQ F ++ + K I V KL+KGR DNL+F
Sbjct: 90 MDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDF 149
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKAQSSHNA 120
+QW K++ D+ G Y+P+E R+ G++A + + PK N+
Sbjct: 150 IQWFKKFYDANYDG--KEYDPVEARQ----GQDAIPPPDPGEQ----IFNLPKKSHHANS 199
Query: 121 RRHDVTSVNPTTQASKT-SKPSAV-------------------VPAYDEQITELKLSVDS 160
+P ++ T S+PS+ V +EQ+ LKL+++
Sbjct: 200 PTAGAAKSSPASKPGSTPSRPSSAKRASSSGSASRSDKDLETQVIQLNEQVHSLKLALEG 259
Query: 161 LEKERDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATD 201
+EKERDFYF KLR+IE+LCQ G E+ +V + +LYA+D
Sbjct: 260 VEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDVLYASD 300
>sp|Q5ZKK1|MARE2_CHICK Microtubule-associated protein RP/EB family member 2 OS=Gallus
gallus GN=MAPRE2 PE=2 SV=1
Length = 338
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 115/216 (53%), Gaps = 22/216 (10%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD PG + + KV F AK E+E I N+K+LQ F ++ + K I V KL+KGR DNL+F
Sbjct: 91 MDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDF 150
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEA-------------SKKSASSQSTNKG 107
+QW K++ D+ G Y+P+E R+ G++A KKS + S G
Sbjct: 151 IQWFKKFFDANYDG--KEYDPVEARQ----GQDALPPPDPGEQIFNLPKKSHHANSPTAG 204
Query: 108 V---TAAPKAQSSHNARRHDVTSVNPTTQASKTSKPSAVVPAYDEQITELKLSVDSLEKE 164
+ A K S+ + + ++ + V EQ+ LKL+++ +EKE
Sbjct: 205 AAKSSPASKPGSTPSRPSSAKKAAPSSSASKSDKDLETQVIQLSEQVHSLKLALEGVEKE 264
Query: 165 RDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYAT 200
RDFYF KLR+IE+LCQ G E+ +V + +LYA+
Sbjct: 265 RDFYFGKLREIELLCQEHGGENNDLVHRLMEVLYAS 300
>sp|P40013|BIM1_YEAST Protein BIM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=BIM1 PE=1 SV=1
Length = 344
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
MD+ + G +PM++V F+A +EYE NYK+LQ F++ I K + V+KLI+ + DNLEF
Sbjct: 40 MDSIY-GDLPMNRVKFNATAEYEFQTNYKILQSCFSRHGIEKTVYVDKLIRCKFQDNLEF 98
Query: 61 MQWMKRYC-----DSVNGGLIHSYNPLERRES--CKGGKEASK-KSASSQSTNK--GVTA 110
+QW+K++ +SV Y+P RR+ A+K ++ S+ +T K T
Sbjct: 99 LQWLKKHWIRHKDESV-------YDPDARRKYRPIITNNSATKPRTVSNPTTAKRSSSTG 151
Query: 111 APKAQSSHNARRHDVTSVNPTTQASKT-----------SKPSAVVPAYDEQITELKLSVD 159
A S A RH +N + + S T +K + + +E+I + K +V
Sbjct: 152 TGSAMSGGLATRHSSLGINGSRKTSVTQGQLVAIQAELTKSQETIGSLNEEIEQYKGTVS 211
Query: 160 SLEKERDFYFAKLRDIEILCQS 181
+LE ER+FYF KLRDIEIL +
Sbjct: 212 TLEIEREFYFNKLRDIEILVHT 233
>sp|Q10113|MAL3_SCHPO Microtubule integrity protein mal3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mal3 PE=1 SV=1
Length = 308
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 47/221 (21%)
Query: 9 VPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEFMQWMKRYC 68
+P+ KVNF+ +EY+ I N+KVLQ VF K I K ++ +L + + DNLEF+QW KR+
Sbjct: 43 IPLKKVNFECNNEYQYINNWKVLQQVFLKKGIDKVVDPERLSRCKMQDNLEFVQWAKRFW 102
Query: 69 DSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKAQSSHNARRHDVTSV 128
D G Y+ L RR ++ A+++ N A ++ +RR V+S
Sbjct: 103 DQYYPG--GDYDALARR--------GNRGPANTRVMNSS------AGATGPSRRRQVSSG 146
Query: 129 NPTTQASK----------TSKPSAVVPA---------YDEQITELKLSVDSLEKERDFYF 169
+ T +K T+ +AV+ A + Q+ E+ ++ LE+ERDFYF
Sbjct: 147 SSTPSMTKSSANNNNVSSTANTAAVLRAKQAQQQITSLETQLYEVNETMFGLERERDFYF 206
Query: 170 AKLRDIEILCQSPGIEHLP--------IVGAIKRILYATDD 202
KLR+IEIL Q+ HL ++ I+ ILY+T+D
Sbjct: 207 NKLREIEILVQT----HLTTSPMSMENMLERIQAILYSTED 243
>sp|Q8WQ86|EB1_DICDI Microtubule-associated protein RP/EB family member 1
OS=Dictyostelium discoideum GN=eb1 PE=1 SV=1
Length = 506
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 81/143 (56%), Gaps = 12/143 (8%)
Query: 1 MDATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEF 60
+D HPG + + VNF+AK +YE I+N+ LQ+ F KL + K++EV++L+K RP NLEF
Sbjct: 37 VDIIHPGKINLKMVNFNAKYDYEYIKNFSYLQESFAKLGVEKYVEVSELVKSRPQANLEF 96
Query: 61 MQWMKRYCDSVNGGLIHSYNPLERRESCKGGKEASKKSASSQSTNKGVTAAPKAQSSHNA 120
QWMK+Y D G YN +ERR + K + + S KG TAA A +
Sbjct: 97 AQWMKKYFDQYYTG--EPYNAIERRIALKIPTDKDRSSL------KGKTAATGAPPTSKP 148
Query: 121 RRHDVTSVNPTTQASKTSKPSAV 143
+++ P T A+ SKP+ V
Sbjct: 149 SPS--STLKPATTAA--SKPAPV 167
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 142 AVVPAYDEQITELKLSVDSLEKERDFYFAKLRDIEILCQSPGIEH--LPIVGAIKRILYA 199
+V+ E+I ++++ +EK+RDFYF +LR+ EI CQ +H +P++G + +ILY
Sbjct: 309 SVIQEMTEKIANFEITIQDIEKDRDFYFERLREAEIFCQ----DHSDVPLLGEVLKILYN 364
Query: 200 TD 201
++
Sbjct: 365 SN 366
>sp|P43745|DPO3E_HAEIN DNA polymerase III subunit epsilon OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=dnaQ PE=3
SV=1
Length = 256
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 153 ELKLSVDSLEKERDFYFAKLRDIEILCQSPGIEHLPIVGAIKRILYATDDDASVVAEAQA 212
++ L D+L+ R Y K +++ LC GI++ KR L+ DA ++A+
Sbjct: 121 DICLVTDTLQMARQMYPGKRNNLDALCDRLGIDN------SKRTLHGALLDAEILADVYL 174
Query: 213 M-------VFHQQKEAEPLSPIAEVSEERTSSETQ 240
M +F +++ E S + V +E+T+ E +
Sbjct: 175 MMTGGQTNLFDEEESVE--SGVIRVMQEKTAEEIK 207
>sp|Q01029|PORTL_SHV21 Portal protein 43 OS=Saimiriine herpesvirus 2 (strain 11) GN=43
PE=3 SV=1
Length = 563
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 131 TTQASKTSKPSAVVPAYDEQITELKLSVDSLEKERDFYFAKLRDIE 176
TTQ K + V QI E +++ LEKER+ Y K+ IE
Sbjct: 347 TTQGLKKHVSNNVFKCLTSQINEQFDTINKLEKERELYLGKINQIE 392
>sp|P03213|PORTL_EBVB9 Portal protein BBRF1 OS=Epstein-Barr virus (strain B95-8) GN=BBRF1
PE=3 SV=1
Length = 613
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 133 QASKTSKPSAVVPAYDEQITELKLSVDSLEKERDFYFAKLRDIE 176
Q K + VV +QI E ++ LEKER+ Y K+R +E
Sbjct: 361 QGLKKKVSNTVVKCLTDQINEQFDQINGLEKERELYLKKIRSME 404
>sp|Q3KSR9|PORTL_EBVG Portal protein BBRF1 OS=Epstein-Barr virus (strain GD1) GN=BBRF1
PE=1 SV=1
Length = 613
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 133 QASKTSKPSAVVPAYDEQITELKLSVDSLEKERDFYFAKLRDIE 176
Q K + VV +QI E ++ LEKER+ Y K+R +E
Sbjct: 361 QGLKKKVSNTVVKCLTDQINEQFDQINGLEKERELYLKKIRSME 404
>sp|Q1HVF2|PORTL_EBVA8 Portal protein BBRF1 OS=Epstein-Barr virus (strain AG876) GN=BBRF1
PE=3 SV=1
Length = 613
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 133 QASKTSKPSAVVPAYDEQITELKLSVDSLEKERDFYFAKLRDIE 176
Q K + VV +QI E ++ LEKER+ Y K+R +E
Sbjct: 361 QGLKKKVSNTVVKCLTDQINEQFDQINGLEKERELYLKKIRSME 404
>sp|P16684|PHNF_ECOLI Probable transcriptional regulator PhnF OS=Escherichia coli
(strain K12) GN=phnF PE=1 SV=1
Length = 241
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 3 ATHPGMVPMHKVNFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVNKLIKGRPLDNLEFMQ 62
+THP P AK E E+ Q+Y+ + + ++ EVN+ R +D L
Sbjct: 4 STHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAARFEVNRHTLRRAIDQLVEKG 63
Query: 63 WMKR 66
W++R
Sbjct: 64 WVQR 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,586,211
Number of Sequences: 539616
Number of extensions: 3798051
Number of successful extensions: 11872
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 11792
Number of HSP's gapped (non-prelim): 99
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)