Query 023608
Match_columns 280
No_of_seqs 333 out of 1923
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 09:44:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023608.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023608hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0q_A 3ANK, 3 ankyrin repeats 99.7 1.4E-16 4.7E-21 119.5 8.9 72 205-276 11-82 (93)
2 4gpm_A Engineered protein OR26 99.7 2.4E-16 8.1E-21 132.7 11.0 98 174-276 53-150 (169)
3 4gpm_A Engineered protein OR26 99.7 5.5E-16 1.9E-20 130.5 11.0 100 172-276 18-117 (169)
4 2jab_A H10-2-G3; HER2, darpin, 99.6 4.3E-15 1.5E-19 118.6 10.6 99 173-276 29-127 (136)
5 2zgd_A 3 repeat synthetic anky 99.6 3.1E-15 1.1E-19 115.9 8.7 72 205-276 33-104 (110)
6 3aaa_C Myotrophin, protein V-1 99.6 4.8E-15 1.6E-19 116.1 9.1 95 172-271 21-115 (123)
7 1d9s_A Cyclin-dependent kinase 99.6 2.8E-15 9.7E-20 119.7 7.9 97 174-276 28-125 (136)
8 1awc_B Protein (GA binding pro 99.6 1.4E-14 4.7E-19 117.5 10.8 99 173-276 49-147 (153)
9 1ihb_A P18-INK4C(INK6), cyclin 99.6 1.4E-14 4.9E-19 117.6 10.0 103 169-276 48-151 (162)
10 2jab_A H10-2-G3; HER2, darpin, 99.5 1E-14 3.5E-19 116.4 8.2 72 205-276 23-94 (136)
11 1bd8_A P19INK4D CDK4/6 inhibit 99.5 2.3E-14 7.9E-19 115.9 10.3 70 205-275 77-146 (156)
12 3aaa_C Myotrophin, protein V-1 99.5 2.8E-14 9.4E-19 111.8 10.3 72 205-276 16-87 (123)
13 2y1l_E Darpin-8.4; hydrolase-i 99.5 3.1E-14 1.1E-18 117.4 11.0 72 205-276 89-160 (169)
14 3c5r_A BARD-1, BRCA1-associate 99.5 1.3E-14 4.3E-19 115.6 8.2 66 205-270 52-117 (137)
15 1ihb_A P18-INK4C(INK6), cyclin 99.5 2.7E-14 9.3E-19 116.0 10.3 97 174-276 21-117 (162)
16 3f6q_A Integrin-linked protein 99.5 3.7E-14 1.3E-18 117.8 11.3 82 190-276 38-119 (179)
17 3twr_A Tankyrase-2; ankyrin re 99.5 3.7E-14 1.3E-18 115.9 11.0 72 205-276 51-122 (165)
18 1bi7_B P16INK4A, MTS1, multipl 99.5 1.5E-14 5.1E-19 118.1 8.5 71 206-276 54-125 (156)
19 1bd8_A P19INK4D CDK4/6 inhibit 99.5 3.6E-14 1.2E-18 114.7 10.6 81 190-276 35-115 (156)
20 3v30_A DNA-binding protein rfx 99.5 2.7E-14 9.3E-19 117.5 9.9 83 189-276 67-149 (172)
21 1awc_B Protein (GA binding pro 99.5 2.5E-14 8.5E-19 116.0 9.5 83 189-276 32-114 (153)
22 1d9s_A Cyclin-dependent kinase 99.5 6.4E-15 2.2E-19 117.6 5.3 82 189-276 10-92 (136)
23 3v30_A DNA-binding protein rfx 99.5 4.7E-14 1.6E-18 116.1 10.6 98 174-276 18-116 (172)
24 4b93_B Ankyrin repeat domain-c 99.5 7.8E-15 2.7E-19 131.6 6.4 95 175-274 136-230 (269)
25 1n0r_A 4ANK, 4 ankyrin repeats 99.5 4.7E-14 1.6E-18 109.0 10.0 82 190-276 34-115 (126)
26 4b93_B Ankyrin repeat domain-c 99.5 2.2E-14 7.5E-19 128.6 8.9 97 175-276 103-199 (269)
27 1ycs_B 53BP2, P53BP2; ankyrin 99.5 2.1E-14 7E-19 125.5 8.3 71 205-275 46-116 (239)
28 3v31_A Ankyrin repeat family A 99.5 5.4E-14 1.8E-18 115.2 9.9 72 205-276 78-149 (167)
29 2rfm_A Putative ankyrin repeat 99.5 5.1E-14 1.7E-18 118.1 9.9 83 189-276 99-181 (192)
30 2y1l_E Darpin-8.4; hydrolase-i 99.5 8.5E-14 2.9E-18 114.8 11.0 99 173-276 29-127 (169)
31 3v31_A Ankyrin repeat family A 99.5 6.3E-14 2.2E-18 114.8 9.6 83 189-276 34-116 (167)
32 1dcq_A PYK2-associated protein 99.5 3E-14 1E-18 128.6 8.4 84 191-276 169-252 (278)
33 2l6b_A NR1C; ankyrin, consensu 99.5 1.6E-14 5.6E-19 111.6 5.6 81 191-276 9-89 (115)
34 3deo_A Signal recognition part 99.5 6.8E-14 2.3E-18 117.2 9.8 84 189-277 74-158 (183)
35 2rfm_A Putative ankyrin repeat 99.5 3.9E-14 1.3E-18 118.8 7.9 82 190-276 67-148 (192)
36 3c5r_A BARD-1, BRCA1-associate 99.5 1.5E-14 5E-19 115.2 4.6 82 190-276 9-90 (137)
37 4hbd_A KN motif and ankyrin re 99.5 6.7E-14 2.3E-18 125.3 9.5 81 191-276 183-264 (276)
38 1yyh_A HN1;, notch 1, ankyrin 99.5 1.2E-13 4.2E-18 121.0 10.3 98 174-276 140-237 (253)
39 2rfa_A Transient receptor pote 99.5 1.6E-13 5.5E-18 117.7 10.4 82 190-276 74-168 (232)
40 2dzn_A Probable 26S proteasome 99.5 2.3E-13 7.8E-18 116.1 10.9 82 190-276 106-188 (228)
41 3lvq_E ARF-GAP with SH3 domain 99.5 9.6E-14 3.3E-18 134.7 9.4 85 190-276 170-254 (497)
42 3deo_A Signal recognition part 99.5 1.4E-13 4.6E-18 115.4 8.8 72 204-276 52-124 (183)
43 3twr_A Tankyrase-2; ankyrin re 99.5 9.4E-14 3.2E-18 113.5 7.4 98 172-275 56-153 (165)
44 3ehr_A Osteoclast-stimulating 99.5 5.9E-14 2E-18 120.5 6.4 98 173-275 88-186 (222)
45 2f8y_A Notch homolog 1, transl 99.5 3.5E-13 1.2E-17 114.7 11.1 100 172-276 106-205 (223)
46 2vge_A RELA-associated inhibit 99.5 1.2E-13 4.2E-18 120.8 8.4 69 206-274 31-99 (229)
47 3ui2_A Signal recognition part 99.5 2.6E-13 8.8E-18 119.4 10.5 82 189-275 75-157 (244)
48 3ehr_A Osteoclast-stimulating 99.5 1E-13 3.5E-18 119.0 7.6 79 193-276 75-154 (222)
49 3jue_A Arfgap with coiled-coil 99.5 2.6E-13 8.8E-18 128.1 11.0 103 169-276 211-315 (368)
50 2b0o_E UPLC1; arfgap, structur 99.4 1.8E-13 6.3E-18 124.9 9.6 70 207-276 204-273 (301)
51 1n0r_A 4ANK, 4 ankyrin repeats 99.4 1.9E-13 6.5E-18 105.5 8.3 72 205-276 11-82 (126)
52 1s70_B 130 kDa myosin-binding 99.4 1.4E-13 4.8E-18 122.3 8.1 71 205-275 49-119 (299)
53 3ljn_A Hypothetical protein; a 99.4 1.5E-13 5E-18 126.3 8.2 100 172-276 154-258 (364)
54 1ycs_B 53BP2, P53BP2; ankyrin 99.4 2.1E-13 7.1E-18 119.1 8.7 99 173-276 52-153 (239)
55 1yyh_A HN1;, notch 1, ankyrin 99.4 2.7E-13 9.2E-18 118.8 9.4 83 189-276 122-204 (253)
56 2xai_A ASB-9, ankyrin repeat a 99.4 1.9E-13 6.6E-18 120.5 8.5 99 172-276 17-115 (261)
57 3ui2_A Signal recognition part 99.4 2E-13 7E-18 120.0 8.6 72 204-276 53-125 (244)
58 3jxi_A Vanilloid receptor-rela 99.4 1.6E-13 5.5E-18 119.9 7.8 82 190-276 139-239 (260)
59 3aji_A 26S proteasome non-ATPa 99.4 5.4E-13 1.8E-17 114.2 10.9 66 206-271 149-214 (231)
60 3t8k_A Uncharacterized protein 99.4 1.2E-13 4E-18 117.7 6.7 62 211-272 57-125 (186)
61 2f8y_A Notch homolog 1, transl 99.4 4.5E-13 1.5E-17 114.0 10.3 83 189-276 90-172 (223)
62 3t8k_A Uncharacterized protein 99.4 6.4E-14 2.2E-18 119.4 4.9 105 172-276 56-168 (186)
63 2etb_A Transient receptor pote 99.4 2E-13 6.7E-18 119.3 7.9 81 191-276 136-235 (256)
64 3f6q_A Integrin-linked protein 99.4 1.1E-13 3.8E-18 114.9 6.1 98 172-274 53-150 (179)
65 3jxi_A Vanilloid receptor-rela 99.4 3.9E-13 1.3E-17 117.5 9.8 80 190-274 92-188 (260)
66 1oy3_D Transcription factor in 99.4 3.9E-13 1.3E-17 117.8 9.7 72 205-276 167-239 (282)
67 3b7b_A Euchromatic histone-lys 99.4 2.6E-13 8.8E-18 116.6 8.0 99 173-276 126-224 (237)
68 3hra_A Ankyrin repeat family p 99.4 4.8E-13 1.7E-17 112.1 9.5 82 190-276 105-192 (201)
69 1bi7_B P16INK4A, MTS1, multipl 99.4 1E-13 3.6E-18 113.0 5.2 79 192-276 13-92 (156)
70 3utm_A Tankyrase-1; tankyrase, 99.4 7.2E-13 2.5E-17 119.2 11.2 81 191-276 58-138 (351)
71 1k1a_A B-cell lymphoma 3-encod 99.4 1E-13 3.5E-18 119.0 5.1 80 191-275 150-229 (241)
72 2rfa_A Transient receptor pote 99.4 6.6E-13 2.3E-17 113.9 10.1 82 190-276 120-211 (232)
73 2etb_A Transient receptor pote 99.4 6.3E-13 2.1E-17 116.1 9.8 80 191-275 90-187 (256)
74 2vge_A RELA-associated inhibit 99.4 1.7E-13 5.7E-18 119.9 5.9 96 176-276 39-137 (229)
75 2dzn_A Probable 26S proteasome 99.4 1.2E-12 4.1E-17 111.5 11.0 83 189-276 70-154 (228)
76 2pnn_A Transient receptor pote 99.4 3.9E-13 1.3E-17 118.7 8.0 82 190-276 147-247 (273)
77 1k1a_A B-cell lymphoma 3-encod 99.4 8.1E-13 2.8E-17 113.3 9.6 81 191-276 116-197 (241)
78 3b7b_A Euchromatic histone-lys 99.4 1.3E-12 4.3E-17 112.3 10.8 100 172-276 91-191 (237)
79 3aji_A 26S proteasome non-ATPa 99.4 1.3E-12 4.5E-17 111.7 10.9 72 205-276 82-153 (231)
80 2pnn_A Transient receptor pote 99.4 8.5E-13 2.9E-17 116.5 9.9 79 191-274 101-196 (273)
81 1ikn_D Protein (I-kappa-B-alph 99.4 3.5E-13 1.2E-17 116.3 7.3 82 190-276 116-198 (236)
82 4hbd_A KN motif and ankyrin re 99.4 4.7E-13 1.6E-17 119.8 8.2 86 191-276 145-230 (276)
83 1wdy_A 2-5A-dependent ribonucl 99.4 1.4E-12 4.7E-17 113.7 11.0 99 173-276 20-119 (285)
84 1n11_A Ankyrin; clathrin, BAND 99.4 7.1E-13 2.4E-17 124.5 9.5 71 205-275 320-390 (437)
85 3kea_A K1L; tropism, ANK repea 99.4 7.8E-13 2.7E-17 118.7 8.8 97 173-276 46-143 (285)
86 3d9h_A CDNA FLJ77766, highly s 99.4 8.6E-13 2.9E-17 118.3 8.9 83 189-276 57-139 (285)
87 3hra_A Ankyrin repeat family p 99.4 2.7E-12 9.1E-17 107.5 10.8 70 205-274 81-152 (201)
88 1s70_B 130 kDa myosin-binding 99.4 4.8E-13 1.7E-17 118.8 6.5 81 189-274 71-151 (299)
89 1n11_A Ankyrin; clathrin, BAND 99.4 1.4E-12 4.8E-17 122.5 10.0 103 169-276 256-358 (437)
90 1wdy_A 2-5A-dependent ribonucl 99.4 2.7E-12 9.3E-17 111.8 11.1 68 209-276 199-267 (285)
91 1oy3_D Transcription factor in 99.4 1.5E-12 5.1E-17 114.0 8.8 81 191-276 192-272 (282)
92 3kea_A K1L; tropism, ANK repea 99.4 1.4E-12 4.7E-17 117.1 8.7 81 189-276 29-109 (285)
93 2fo1_E LIN-12 protein; beta-ba 99.4 2.1E-12 7E-17 120.2 10.1 81 191-276 279-360 (373)
94 1ikn_D Protein (I-kappa-B-alph 99.3 1.5E-12 5E-17 112.4 8.1 98 174-276 61-165 (236)
95 1sw6_A Regulatory protein SWI6 99.3 1.2E-12 4.1E-17 119.9 7.5 65 210-274 111-176 (327)
96 3utm_A Tankyrase-1; tankyrase, 99.3 4.6E-12 1.6E-16 113.9 11.1 65 205-269 256-320 (351)
97 4g8k_A 2-5A-dependent ribonucl 99.3 2.9E-12 9.9E-17 116.5 9.8 68 209-276 219-287 (337)
98 3ljn_A Hypothetical protein; a 99.3 1.4E-12 4.7E-17 119.9 7.7 81 191-276 138-225 (364)
99 2xai_A ASB-9, ankyrin repeat a 99.3 4.3E-12 1.5E-16 111.8 10.4 97 174-276 52-148 (261)
100 3jue_A Arfgap with coiled-coil 99.3 2.8E-12 9.6E-17 121.0 9.1 72 205-276 208-282 (368)
101 3lvq_E ARF-GAP with SH3 domain 99.3 3.9E-12 1.3E-16 123.4 8.1 72 205-276 141-221 (497)
102 3d9h_A CDNA FLJ77766, highly s 99.3 1.1E-11 3.7E-16 111.1 10.2 71 205-276 134-204 (285)
103 1sw6_A Regulatory protein SWI6 99.3 1.7E-12 5.8E-17 118.9 4.7 97 175-276 114-219 (327)
104 4g8k_A 2-5A-dependent ribonucl 99.3 1.6E-11 5.4E-16 111.6 11.0 94 173-276 221-315 (337)
105 3eu9_A Huntingtin-interacting 99.3 2.5E-11 8.5E-16 103.3 10.8 71 205-275 85-155 (240)
106 1dcq_A PYK2-associated protein 99.3 1.6E-11 5.3E-16 110.7 9.7 73 204-276 138-219 (278)
107 3eu9_A Huntingtin-interacting 99.2 3.7E-11 1.3E-15 102.2 11.0 72 205-276 118-191 (240)
108 2fo1_E LIN-12 protein; beta-ba 99.2 6.1E-12 2.1E-16 117.0 6.4 62 215-276 152-213 (373)
109 2b0o_E UPLC1; arfgap, structur 99.2 1.4E-11 4.6E-16 112.5 8.4 72 205-276 160-240 (301)
110 2l6b_A NR1C; ankyrin, consensu 99.2 2.4E-11 8.2E-16 93.5 5.5 88 174-266 25-112 (115)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.0 8.5E-10 2.9E-14 82.0 9.1 78 172-254 16-93 (93)
112 2zgd_A 3 repeat synthetic anky 99.0 1.5E-10 5.2E-15 89.2 4.3 55 222-276 17-71 (110)
113 2aja_A Ankyrin repeat family p 99.0 4E-11 1.4E-15 113.3 -0.2 75 201-276 133-213 (376)
114 2aja_A Ankyrin repeat family p 98.8 1.1E-09 3.9E-14 103.3 1.1 78 193-276 94-177 (376)
115 2llw_A Heat shock protein STI1 98.0 2.8E-06 9.5E-11 62.0 3.4 54 58-133 10-63 (71)
116 2lnm_A Protein TIC 40, chlorop 97.9 9.3E-06 3.2E-10 57.5 4.4 52 61-134 5-56 (62)
117 2lnm_A Protein TIC 40, chlorop 97.3 0.0002 6.7E-09 50.6 3.5 46 48-96 14-59 (62)
118 2llw_A Heat shock protein STI1 97.2 4.1E-05 1.4E-09 55.7 -0.3 45 46-93 20-64 (71)
119 2llv_A Heat shock protein STI1 96.7 0.0007 2.4E-08 49.0 2.2 51 60-132 15-66 (71)
120 2llv_A Heat shock protein STI1 93.0 0.03 1E-06 40.3 1.2 17 64-83 9-25 (71)
121 2qsf_X RAD23, UV excision repa 91.8 0.15 5E-06 42.9 4.2 30 63-92 27-58 (171)
122 2qsf_X RAD23, UV excision repa 86.8 0.68 2.3E-05 38.8 4.5 42 48-89 25-69 (171)
123 1pve_A HHR23B, UV excision rep 84.3 0.89 3E-05 32.8 3.5 30 63-92 8-38 (72)
124 2f4m_B UV excision repair prot 77.1 5.1 0.00018 27.8 5.3 31 62-92 5-36 (61)
125 2k7r_A Primosomal protein DNAI 73.4 2.1 7.1E-05 32.7 2.7 50 115-164 8-57 (106)
126 3pk1_B Apoptosis regulator BAX 47.6 7.2 0.00025 23.7 1.2 15 64-78 3-17 (34)
127 2gyq_A YCFI, putative structur 38.0 93 0.0032 25.5 7.1 96 138-249 44-143 (173)
128 3hiu_A Uncharacterized protein 37.1 88 0.003 25.6 6.7 49 124-172 21-71 (166)
129 1oqy_A HHR23A, UV excision rep 31.9 61 0.0021 30.0 5.5 44 117-169 239-283 (368)
130 1oqy_A HHR23A, UV excision rep 28.7 19 0.00066 33.4 1.4 19 64-82 240-258 (368)
131 2gs4_A Protein YCIF; stress pr 28.2 1.3E+02 0.0045 24.4 6.3 97 138-250 37-138 (166)
132 3ogh_B Protein YCIE; iron-bind 28.2 1E+02 0.0036 25.3 5.7 49 124-172 24-74 (171)
133 1s69_A Cyanoglobin, hemoglobin 27.4 57 0.002 24.6 3.8 27 121-147 11-37 (124)
134 1dlw_A Hemoglobin; oxygen stor 22.8 68 0.0023 23.8 3.4 26 122-147 10-35 (116)
135 3aq9_A Group 1 truncated hemog 22.6 75 0.0026 23.8 3.6 27 121-147 14-40 (121)
136 4g3o_A E3 ubiquitin-protein li 21.3 91 0.0031 21.2 3.3 33 75-116 9-41 (58)
No 1
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.67 E-value=1.4e-16 Score=119.48 Aligned_cols=72 Identities=26% Similarity=0.314 Sum_probs=69.0
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 11 ~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~ 82 (93)
T 1n0q_A 11 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82 (93)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 567889999999999999999999999999999999999999999999999999999999999999999865
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.67 E-value=2.4e-16 Score=132.70 Aligned_cols=98 Identities=22% Similarity=0.280 Sum_probs=81.6
Q ss_pred HHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Q 023608 174 LDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA 253 (280)
Q Consensus 174 ~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GA 253 (280)
+..+.+.+.....+.....+.++..+ ..++.+++++|++.|+++|.+|.+|+||||+||..|+.++|++|+++|+
T Consensus 53 ~~~ll~~gad~~~~d~~g~TpLh~A~-----~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 127 (169)
T 4gpm_A 53 VKLLISKGADVNAKDSDGRTPLHHAA-----ENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHhcccchhhhccCCCCHHHHHH-----HcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 33444444444444444455666555 6788899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCCC
Q 023608 254 DKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 254 dvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+++.+|.+|+||||+|+.+|+.+
T Consensus 128 d~~~~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 128 DVNTSDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CccccCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999864
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.65 E-value=5.5e-16 Score=130.46 Aligned_cols=100 Identities=21% Similarity=0.296 Sum_probs=83.1
Q ss_pred HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 172 PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 172 ~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
++++.+.+.|.+.-.......+.++..+ ..+..++++.|++.|++++.+|.+|+||||+||..|+.++|++||++
T Consensus 18 ~~v~~Ll~~Gadvn~~d~~g~t~l~~a~-----~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 92 (169)
T 4gpm_A 18 DRVKDLIENGADVNASDSDGRTPLHHAA-----ENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK 92 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 3344445555544444444555665555 66788999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 252 GADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 252 GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
|+++|.+|.+|+||||+||.+|+++
T Consensus 93 gadvn~~d~~G~TpLh~A~~~g~~~ 117 (169)
T 4gpm_A 93 GADVNAKDSDGRTPLHHAAENGHKE 117 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999865
No 4
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.60 E-value=4.3e-15 Score=118.57 Aligned_cols=99 Identities=20% Similarity=0.141 Sum_probs=81.8
Q ss_pred HHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 023608 173 ILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG 252 (280)
Q Consensus 173 i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~G 252 (280)
+++.+.+.+...-.......+.+|.++ ..++.+++++|++.|++++.+|..|.||||+||..|+.+++++|+++|
T Consensus 29 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 103 (136)
T 2jab_A 29 EVRILMANGADVNAKDEYGLTPLYLAT-----AHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG 103 (136)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 344444444443333344556666655 567889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 253 ADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 253 Advn~~D~~G~TPLH~Aa~~G~~e 276 (280)
++++.+|..|+||||+|+.+|+.+
T Consensus 104 ~~~~~~~~~g~tpl~~A~~~~~~~ 127 (136)
T 2jab_A 104 ADVNAQDKFGKTAFDISIGNGNED 127 (136)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCcCcCCCCCCHHHHHHHCCCHH
Confidence 999999999999999999998865
No 5
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.59 E-value=3.1e-15 Score=115.89 Aligned_cols=72 Identities=25% Similarity=0.284 Sum_probs=69.0
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++.++++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 33 ~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 104 (110)
T 2zgd_A 33 RAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNED 104 (110)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHH
Confidence 667889999999999999999999999999999999999999999999999999999999999999998865
No 6
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.58 E-value=4.8e-15 Score=116.13 Aligned_cols=95 Identities=14% Similarity=0.083 Sum_probs=71.6
Q ss_pred HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 172 PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 172 ~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
++++.+.+.+...-.......+.+|..+ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 21 ~~v~~ll~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 95 (123)
T 3aaa_C 21 DEVKDYVAKGEDVNRTLEGGRKPLHYAA-----DCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 95 (123)
T ss_dssp HHHHHHHHTTCCTTSCCTTSSCHHHHHH-----HTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcCccCCCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4455555555444333344455565555 56777888888888888888888888888888888888888888888
Q ss_pred CCCCCCCCCCCCcHHHHHHH
Q 023608 252 GADKDEEDSEGRTALHFACG 271 (280)
Q Consensus 252 GAdvn~~D~~G~TPLH~Aa~ 271 (280)
|++++.+|..|+||||+|+.
T Consensus 96 ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 96 GADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp TCCTTCCCTTSCCHHHHCCC
T ss_pred CCCCCCcCCCCCCHHHHhCC
Confidence 88888888888888888853
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.58 E-value=2.8e-15 Score=119.67 Aligned_cols=97 Identities=19% Similarity=0.097 Sum_probs=78.2
Q ss_pred HHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCC-CCcHHHHHHhcCCHHHHHHHHHcC
Q 023608 174 LDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNE-DESIVHHTASVGDAEGLKNALAAG 252 (280)
Q Consensus 174 ~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~-g~TpLh~Aa~~G~~eivk~LL~~G 252 (280)
++.+.+.+...-.......+.+|..+ . ++.+++++|++.|++++.+|.. |+||||+||..|+.+++++|+++|
T Consensus 28 v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 101 (136)
T 1d9s_A 28 VRQLLEAGADPNALNRFGRRPIQVMM-----M-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG 101 (136)
T ss_dssp HHHHHHTTCCTTCCCTTCCTTTTTST-----T-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC
T ss_pred HHHHHHcCCCcCCcCCCCCCHHHHHH-----c-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 33444444333222233334444443 6 8889999999999999999999 999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 253 ADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 253 Advn~~D~~G~TPLH~Aa~~G~~e 276 (280)
++++.+|..|+||||+|+.+|+.+
T Consensus 102 a~~~~~d~~g~tpl~~A~~~~~~~ 125 (136)
T 1d9s_A 102 ARLDVCDAWGRLPVDLAEEQGHRD 125 (136)
T ss_dssp CCCCCCSSSSSCHHHHHHHHTCHH
T ss_pred CCCCccCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999998764
No 8
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.57 E-value=1.4e-14 Score=117.52 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=81.7
Q ss_pred HHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 023608 173 ILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG 252 (280)
Q Consensus 173 i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~G 252 (280)
+++.+.+.+...-.......+.+|..+ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 49 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 123 (153)
T 1awc_B 49 TTEVLLRAGVSRDARTKVDRTPLHMAA-----SEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTCCCHHHHHH-----HHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHH-----HcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 344445454443333344556666655 567889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 253 ADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 253 Advn~~D~~G~TPLH~Aa~~G~~e 276 (280)
++++.+|..|+||||+|+.+|+.+
T Consensus 124 a~~~~~~~~g~t~l~~A~~~~~~~ 147 (153)
T 1awc_B 124 ADVHTQSKFCKTAFDISIDNGNED 147 (153)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCccccCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999865
No 9
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.55 E-value=1.4e-14 Score=117.64 Aligned_cols=103 Identities=17% Similarity=0.089 Sum_probs=73.8
Q ss_pred ChHHHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHH
Q 023608 169 SLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNA 248 (280)
Q Consensus 169 ~~~~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~L 248 (280)
+-.++++.+.+.+...-.......+.+|..+ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|
T Consensus 48 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 122 (162)
T 1ihb_A 48 GNPEIARRLLLRGANPDLKDRTGFAVIHDAA-----RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122 (162)
T ss_dssp SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3344555555555443333334445555554 55677888888888888888888888888888888888888888
Q ss_pred HHcCCC-CCCCCCCCCcHHHHHHHcCCCC
Q 023608 249 LAAGAD-KDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 249 L~~GAd-vn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+++|++ ++.+|..|+||||+|+.+|+.+
T Consensus 123 l~~g~~~~~~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 123 VKHTASNVGHRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp HHHSCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHccCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 888877 5888888888888888887754
No 10
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.55 E-value=1e-14 Score=116.41 Aligned_cols=72 Identities=22% Similarity=0.205 Sum_probs=69.2
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..|+.++++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+||.+|+.+
T Consensus 23 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 94 (136)
T 2jab_A 23 RAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLE 94 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 778899999999999999999999999999999999999999999999999999999999999999998764
No 11
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.54 E-value=2.3e-14 Score=115.92 Aligned_cols=70 Identities=17% Similarity=0.114 Sum_probs=45.7
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEV 275 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~ 275 (280)
..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|+||||+|+.+|+.
T Consensus 77 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQ 146 (156)
T ss_dssp HTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCH
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcH
Confidence 44556666666666666666666666666666666666666666666 66666666666666666666654
No 12
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.54 E-value=2.8e-14 Score=111.77 Aligned_cols=72 Identities=24% Similarity=0.176 Sum_probs=69.0
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++.++++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 16 ~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~ 87 (123)
T 3aaa_C 16 KNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS 87 (123)
T ss_dssp HTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 678889999999999999999999999999999999999999999999999999999999999999998764
No 13
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.54 E-value=3.1e-14 Score=117.43 Aligned_cols=72 Identities=21% Similarity=0.216 Sum_probs=60.4
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNED 160 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence 557778888888888888888888888888888888888888888888888888888888888888887754
No 14
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.54 E-value=1.3e-14 Score=115.59 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=36.1
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFAC 270 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa 270 (280)
..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 52 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 117 (137)
T 3c5r_A 52 NHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTD 117 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCC
T ss_pred HcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 334445555555555555555555555555555555555555555555555555555555555554
No 15
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.54 E-value=2.7e-14 Score=115.98 Aligned_cols=97 Identities=20% Similarity=0.212 Sum_probs=79.6
Q ss_pred HHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Q 023608 174 LDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA 253 (280)
Q Consensus 174 ~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GA 253 (280)
++.+.+.+...-.......+.++... . ++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 21 v~~Ll~~~~~~~~~~~~g~t~L~~A~-----~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 94 (162)
T 1ihb_A 21 LTSLLQNNVNVNAQNGFGRTALQVMK-----L-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQA 94 (162)
T ss_dssp HHHHTTSCCCTTCCCTTSCCHHHHCC-----S-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHhCCCCccccCccCccHHHHHH-----c-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34444444443333344445555433 5 88899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCCC
Q 023608 254 DKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 254 dvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+++.+|..|+||||+|+.+|+.+
T Consensus 95 ~~~~~~~~g~t~L~~A~~~~~~~ 117 (162)
T 1ihb_A 95 DVNIEDNEGNLPLHLAAKEGHLR 117 (162)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999998864
No 16
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.54 E-value=3.7e-14 Score=117.83 Aligned_cols=82 Identities=21% Similarity=0.254 Sum_probs=66.7
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~A 269 (280)
...+.++..+ ..++.+++++|++.|++++.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 38 ~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 112 (179)
T 3f6q_A 38 HGFSPLHWAC-----REGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYA 112 (179)
T ss_dssp TSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHH-----HcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 3345555554 56777888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHcCCCC
Q 023608 270 CGYGEVC 276 (280)
Q Consensus 270 a~~G~~e 276 (280)
+.+|+.+
T Consensus 113 ~~~~~~~ 119 (179)
T 3f6q_A 113 CFWGQDQ 119 (179)
T ss_dssp HHTTCHH
T ss_pred HHcCCHH
Confidence 8887754
No 17
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.54 E-value=3.7e-14 Score=115.92 Aligned_cols=72 Identities=17% Similarity=0.036 Sum_probs=56.7
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++.+++++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 51 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 122 (165)
T 3twr_A 51 GYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYE 122 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 556777788888888888888888888888888888888888888888888888888888888888777654
No 18
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.53 E-value=1.5e-14 Score=118.06 Aligned_cols=71 Identities=23% Similarity=0.158 Sum_probs=68.1
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCc-HHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 206 VGGDATTSADNAGADEAEEVGNEDES-IVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 206 ~g~~~~v~~Ll~~gadvn~~D~~g~T-pLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
.++.+++++|++.|++++.+|..|+| |||+||..|+.++|++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 54 ~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (156)
T 1bi7_B 54 MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD 125 (156)
T ss_dssp TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHH
Confidence 57889999999999999999999999 999999999999999999999999999999999999999998864
No 19
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.53 E-value=3.6e-14 Score=114.73 Aligned_cols=81 Identities=25% Similarity=0.238 Sum_probs=73.8
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~A 269 (280)
...+.++. + ..++.++++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 35 ~g~t~L~~-~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (156)
T 1bd8_A 35 FGKTALQV-M-----MFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLA 108 (156)
T ss_dssp TSCCHHHH-S-----CTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred CCCcHHHH-H-----HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 34455655 5 66888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCC
Q 023608 270 CGYGEVC 276 (280)
Q Consensus 270 a~~G~~e 276 (280)
+.+|+.+
T Consensus 109 ~~~~~~~ 115 (156)
T 1bd8_A 109 VQEGHTA 115 (156)
T ss_dssp HHHTCHH
T ss_pred HHhChHH
Confidence 9998764
No 20
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.53 E-value=2.7e-14 Score=117.52 Aligned_cols=83 Identities=14% Similarity=0.060 Sum_probs=74.0
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
....+.+|..+ ..++.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 67 ~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 141 (172)
T 3v30_A 67 KERESALSLAS-----TGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDL 141 (172)
T ss_dssp TTCCCHHHHHH-----HTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCHHHHHH-----HCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 34445566555 6688899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
|+.+|+.+
T Consensus 142 A~~~~~~~ 149 (172)
T 3v30_A 142 AVALGYRK 149 (172)
T ss_dssp HHHHTCHH
T ss_pred HHHhCcHH
Confidence 99998764
No 21
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.53 E-value=2.5e-14 Score=115.96 Aligned_cols=83 Identities=25% Similarity=0.226 Sum_probs=75.2
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
+...+.++..+ ..++.+++++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+
T Consensus 32 ~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 106 (153)
T 1awc_B 32 WLGTSPLHLAA-----QYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHW 106 (153)
T ss_dssp TTCCCHHHHHH-----HHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 44456666655 5678899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
|+.+|+.+
T Consensus 107 A~~~~~~~ 114 (153)
T 1awc_B 107 ATEHNHQE 114 (153)
T ss_dssp HHHTTCHH
T ss_pred HHHcCCHH
Confidence 99998864
No 22
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.52 E-value=6.4e-15 Score=117.57 Aligned_cols=82 Identities=16% Similarity=0.070 Sum_probs=73.7
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCC-CCcHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE-GRTALH 267 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~-G~TPLH 267 (280)
....+.++..+ ..++.++++.|++.|++++.+|..|+||||+||. |+.+++++|+++|++++.+|.. |+||||
T Consensus 10 ~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 83 (136)
T 1d9s_A 10 GSSDAGLATAA-----ARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVH 83 (136)
T ss_dssp CCCSCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHH
T ss_pred CCCccHHHHHH-----HcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHH
Confidence 33445565555 6788899999999999999999999999999999 9999999999999999999999 999999
Q ss_pred HHHHcCCCC
Q 023608 268 FACGYGEVC 276 (280)
Q Consensus 268 ~Aa~~G~~e 276 (280)
+|+.+|+++
T Consensus 84 ~A~~~~~~~ 92 (136)
T 1d9s_A 84 DAAREGFLD 92 (136)
T ss_dssp HHHHHTCHH
T ss_pred HHHHcCCHH
Confidence 999998864
No 23
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.52 E-value=4.7e-14 Score=116.10 Aligned_cols=98 Identities=19% Similarity=0.058 Sum_probs=80.5
Q ss_pred HHHHHcCChhhhh-hhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 023608 174 LDEIESGGPSAMM-KYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG 252 (280)
Q Consensus 174 ~e~i~~~g~~al~-~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~G 252 (280)
+..+...+...+. ......+.++..+ ..++.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|
T Consensus 18 v~~ll~~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 92 (172)
T 3v30_A 18 LKEHLRKGDNLVNKPDERGFTPLIWAS-----AFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD 92 (172)
T ss_dssp HHHHHTTCSGGGGCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHHHHHcCcccccCCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 3444444443222 2234445566555 668889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 253 ADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 253 Advn~~D~~G~TPLH~Aa~~G~~e 276 (280)
++++.+|..|+||||+|+.+|+++
T Consensus 93 ~~~~~~~~~g~t~L~~A~~~~~~~ 116 (172)
T 3v30_A 93 VDINIYDWNGGTPLLYAVRGNHVK 116 (172)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999998865
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.52 E-value=7.8e-15 Score=131.57 Aligned_cols=95 Identities=13% Similarity=0.023 Sum_probs=73.4
Q ss_pred HHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 023608 175 DEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGAD 254 (280)
Q Consensus 175 e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAd 254 (280)
+.+...+...-.+.....+.++..+ ..|+.+++++|++.|+++|.+|..|+||||+||..|+.++|++||++|++
T Consensus 136 ~~Ll~~g~~~n~~d~~g~TpL~~A~-----~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad 210 (269)
T 4b93_B 136 KCLLDSNAKPNKKDLSGNTPLIYAC-----SGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS 210 (269)
T ss_dssp HHHHHTTCCSCCCCTTCCCHHHHHH-----HTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHH-----HCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC
Confidence 3333334333333333445555544 66788899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCC
Q 023608 255 KDEEDSEGRTALHFACGYGE 274 (280)
Q Consensus 255 vn~~D~~G~TPLH~Aa~~G~ 274 (280)
++.+|.+|+||||+|+.+++
T Consensus 211 ~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 211 VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp SCCCCTTSCCSGGGSCTTCH
T ss_pred CCCcCCCCCCHHHHHHhCCc
Confidence 99999999999999987765
No 25
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.52 E-value=4.7e-14 Score=108.99 Aligned_cols=82 Identities=26% Similarity=0.305 Sum_probs=73.7
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~A 269 (280)
.....++... ..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 34 ~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A 108 (126)
T 1n0r_A 34 NGRTPLHLAA-----RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 108 (126)
T ss_dssp TSCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHH-----HcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 3445555554 56788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCC
Q 023608 270 CGYGEVC 276 (280)
Q Consensus 270 a~~G~~e 276 (280)
+.+|+.+
T Consensus 109 ~~~~~~~ 115 (126)
T 1n0r_A 109 ARNGHLE 115 (126)
T ss_dssp HHTTCHH
T ss_pred HHcCcHH
Confidence 9998864
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.52 E-value=2.2e-14 Score=128.63 Aligned_cols=97 Identities=18% Similarity=0.071 Sum_probs=79.7
Q ss_pred HHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Q 023608 175 DEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGAD 254 (280)
Q Consensus 175 e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAd 254 (280)
+.+...+.............++... ..+..++++.|++.|+++|.+|..|+||||+||..|+.++|++||++|++
T Consensus 103 ~~Ll~~~a~~~~~~~~g~t~l~~a~-----~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad 177 (269)
T 4b93_B 103 PLLLKHGANAGARNADQAVPLHLAC-----QQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGAS 177 (269)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHH-----HHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC
T ss_pred HHHHhcCCCcCccCCCCCCcccccc-----ccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Confidence 3444444444333344444554444 56778999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHcCCCC
Q 023608 255 KDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 255 vn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+|.+|..|+||||+||.+|+++
T Consensus 178 vn~~~~~g~t~Lh~A~~~g~~~ 199 (269)
T 4b93_B 178 INASNNKGNTALHEAVIEKHVF 199 (269)
T ss_dssp TTCBCTTSCBHHHHHHHTTCHH
T ss_pred CCccccCCCcHHHHHHHcCCHH
Confidence 9999999999999999999865
No 27
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.52 E-value=2.1e-14 Score=125.53 Aligned_cols=71 Identities=23% Similarity=0.257 Sum_probs=40.5
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEV 275 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~ 275 (280)
..|+.++++.|++.|++++.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+||.+|++
T Consensus 46 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~ 116 (239)
T 1ycs_B 46 LEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV 116 (239)
T ss_dssp HHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 34455555555555555555555555555555555555555555555555555555555555555555543
No 28
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.51 E-value=5.4e-14 Score=115.19 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=59.6
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 149 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS 149 (167)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 556778888888888888888888888888888888888888888888888888888888888888877754
No 29
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.51 E-value=5.1e-14 Score=118.11 Aligned_cols=83 Identities=22% Similarity=0.120 Sum_probs=74.1
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
....+.+|.++ ..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 99 ~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 173 (192)
T 2rfm_A 99 FSGKTPLMWSI-----IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEAS 173 (192)
T ss_dssp TTSCCHHHHHH-----HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHH
T ss_pred CCCCcHHHHHH-----HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 34455666555 5678899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
|+.+|+.+
T Consensus 174 A~~~~~~~ 181 (192)
T 2rfm_A 174 ARIFGRQE 181 (192)
T ss_dssp HHHTTCHH
T ss_pred HHHhCcHH
Confidence 99999865
No 30
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.51 E-value=8.5e-14 Score=114.81 Aligned_cols=99 Identities=19% Similarity=0.186 Sum_probs=82.3
Q ss_pred HHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 023608 173 ILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG 252 (280)
Q Consensus 173 i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~G 252 (280)
+++.+.+.+...-.......+.++.++ ..++.+++++|++.|++++..|..|+||||+||..|+.+++++|+++|
T Consensus 29 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 103 (169)
T 2y1l_E 29 EVRILMANGADVNAEDASGWTPLHLAA-----FNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNG 103 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 344444445443333344556666655 668889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 253 ADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 253 Advn~~D~~G~TPLH~Aa~~G~~e 276 (280)
++++.+|..|+||||+|+.+|+++
T Consensus 104 ~~~~~~~~~g~t~L~~A~~~~~~~ 127 (169)
T 2y1l_E 104 ADVNANDMEGHTPLHLAAMFGHLE 127 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999998864
No 31
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.50 E-value=6.3e-14 Score=114.76 Aligned_cols=83 Identities=24% Similarity=0.163 Sum_probs=74.8
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
....+.++..+ ..++.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 34 ~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 108 (167)
T 3v31_A 34 EEGFTPLMWAA-----AHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLY 108 (167)
T ss_dssp TTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHH-----HCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHH
Confidence 33445666555 6688899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
|+.+|+.+
T Consensus 109 A~~~~~~~ 116 (167)
T 3v31_A 109 AVHGNHVK 116 (167)
T ss_dssp HHHTTCHH
T ss_pred HHHcCCHH
Confidence 99998764
No 32
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.50 E-value=3e-14 Score=128.62 Aligned_cols=84 Identities=15% Similarity=0.083 Sum_probs=73.1
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFAC 270 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa 270 (280)
..+.+|.++.. + ..+..+++++|++.|+++|.+|..|+||||+||..|+.++|++||++|++++.+|..|+||||+|+
T Consensus 169 g~t~Lh~A~~~-~-~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 246 (278)
T 1dcq_A 169 DETALHLAVRS-V-DRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 246 (278)
T ss_dssp TCBHHHHHHHH-C-CTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcchHHHHh-c-ccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHH
Confidence 34555555511 1 126789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCC
Q 023608 271 GYGEVC 276 (280)
Q Consensus 271 ~~G~~e 276 (280)
.+|+.+
T Consensus 247 ~~~~~~ 252 (278)
T 1dcq_A 247 RLKHEH 252 (278)
T ss_dssp HTTCHH
T ss_pred HcCCHH
Confidence 999864
No 33
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.50 E-value=1.6e-14 Score=111.59 Aligned_cols=81 Identities=22% Similarity=0.245 Sum_probs=73.1
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFAC 270 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa 270 (280)
....++.++ ..++.++++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 9 g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 9 GNTPLHNAA-----KNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp SCCHHHHHH-----HHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred CCCHHHHHH-----HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 345555555 567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCC
Q 023608 271 GYGEVC 276 (280)
Q Consensus 271 ~~G~~e 276 (280)
.+|+.+
T Consensus 84 ~~~~~~ 89 (115)
T 2l6b_A 84 KNGHHE 89 (115)
T ss_dssp TTTCHH
T ss_pred HCCCHH
Confidence 988754
No 34
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.50 E-value=6.8e-14 Score=117.23 Aligned_cols=84 Identities=20% Similarity=0.210 Sum_probs=74.1
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccC-CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVG-NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALH 267 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D-~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH 267 (280)
....+.+|..+ ..++.+++++|++.|++++.+| ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 74 ~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 148 (183)
T 3deo_A 74 ENGRTALLFVA-----GLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALE 148 (183)
T ss_dssp TTSCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHH
Confidence 44455666655 5678899999999999999998 89999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCC
Q 023608 268 FACGYGEVCS 277 (280)
Q Consensus 268 ~Aa~~G~~e~ 277 (280)
+|+..++.+.
T Consensus 149 ~A~~~~~~~~ 158 (183)
T 3deo_A 149 LAREILKTTP 158 (183)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHhccCcc
Confidence 9998766543
No 35
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.49 E-value=3.9e-14 Score=118.81 Aligned_cols=82 Identities=16% Similarity=0.087 Sum_probs=74.0
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~A 269 (280)
...+.++.++ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 67 ~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 141 (192)
T 2rfm_A 67 EGSTALIWAV-----KNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVA 141 (192)
T ss_dssp TSCCHHHHHH-----HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHH
T ss_pred cCccHHHHHH-----HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 3445565555 66888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCC
Q 023608 270 CGYGEVC 276 (280)
Q Consensus 270 a~~G~~e 276 (280)
+.+|+.+
T Consensus 142 ~~~~~~~ 148 (192)
T 2rfm_A 142 SKYGRSE 148 (192)
T ss_dssp HHHTCHH
T ss_pred HHcCCHH
Confidence 9998764
No 36
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.49 E-value=1.5e-14 Score=115.24 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=74.2
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~A 269 (280)
...+.+|..+ ..++.+++++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 9 ~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 9 RGETLLHIAS-----IKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDA 83 (137)
T ss_dssp TCCCHHHHHH-----HHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred CCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHH
Confidence 3445566555 56788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCC
Q 023608 270 CGYGEVC 276 (280)
Q Consensus 270 a~~G~~e 276 (280)
+.+|+.+
T Consensus 84 ~~~~~~~ 90 (137)
T 3c5r_A 84 AKNGHVD 90 (137)
T ss_dssp HHTTCHH
T ss_pred HHcCCHH
Confidence 9999865
No 37
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.49 E-value=6.7e-14 Score=125.31 Aligned_cols=81 Identities=20% Similarity=0.131 Sum_probs=73.5
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHH
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALA-AGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~-~GAdvn~~D~~G~TPLH~A 269 (280)
..+.+|..+ ..++.+++++|++.|+++|.+|..|+||||+||..|+.++|++|++ .|++++.+|..|+||||+|
T Consensus 183 g~tpLh~A~-----~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A 257 (276)
T 4hbd_A 183 GQTALMLAV-----SHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVA 257 (276)
T ss_dssp CCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred CCCHHHHHH-----HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHH
Confidence 445555554 6688899999999999999999999999999999999999999999 8999999999999999999
Q ss_pred HHcCCCC
Q 023608 270 CGYGEVC 276 (280)
Q Consensus 270 a~~G~~e 276 (280)
+.+|+.+
T Consensus 258 ~~~g~~~ 264 (276)
T 4hbd_A 258 LDAGQSE 264 (276)
T ss_dssp HHHTCHH
T ss_pred HHcCCHH
Confidence 9999865
No 38
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.48 E-value=1.2e-13 Score=121.00 Aligned_cols=98 Identities=17% Similarity=0.051 Sum_probs=80.8
Q ss_pred HHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Q 023608 174 LDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA 253 (280)
Q Consensus 174 ~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GA 253 (280)
++.+.+.+...-.......+.+|.++ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 140 v~~Ll~~g~~~~~~d~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 140 LEDLINSHADVNAVDDLGKSALHWAA-----AVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214 (253)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 33444444443333344456666555 5678899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCCC
Q 023608 254 DKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 254 dvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+++.+|..|+||||+|+.+||.+
T Consensus 215 ~~~~~d~~g~tpl~~A~~~g~~~ 237 (253)
T 1yyh_A 215 NRDITDHMDRLPRDIAQERMHHD 237 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CccccccCCCCHHHHHHHcCCHH
Confidence 99999999999999999999865
No 39
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.47 E-value=1.6e-13 Score=117.75 Aligned_cols=82 Identities=21% Similarity=0.126 Sum_probs=73.1
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCC-------------CCCcHHHHHHhcCCHHHHHHHHHcCCCCC
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGN-------------EDESIVHHTASVGDAEGLKNALAAGADKD 256 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~-------------~g~TpLh~Aa~~G~~eivk~LL~~GAdvn 256 (280)
...+.++..+ ..++.+++++|++.|++++.++. .|+||||+|+..|+.++|++|+++|++++
T Consensus 74 ~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 148 (232)
T 2rfa_A 74 EGQTALHIAV-----INQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR 148 (232)
T ss_dssp TTCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCcCHHHHHH-----HcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 3445555555 67888999999999999999876 79999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHcCCCC
Q 023608 257 EEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 257 ~~D~~G~TPLH~Aa~~G~~e 276 (280)
.+|..|+||||+|+.+|+.+
T Consensus 149 ~~d~~g~t~L~~A~~~~~~~ 168 (232)
T 2rfa_A 149 AQDSLGNTVLHILILQPNKT 168 (232)
T ss_dssp CCCTTSCCHHHHHHTCSCHH
T ss_pred CCCCCCCCHHHHHHHcCChH
Confidence 99999999999999998764
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.47 E-value=2.3e-13 Score=116.07 Aligned_cols=82 Identities=16% Similarity=0.054 Sum_probs=68.3
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHH
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDSEGRTALHF 268 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~G-Advn~~D~~G~TPLH~ 268 (280)
...+.++..+ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+
T Consensus 106 ~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~ 180 (228)
T 2dzn_A 106 QGVTCLHLAV-----GKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH 180 (228)
T ss_dssp TCCCHHHHHH-----HTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHH
T ss_pred CCCCHHHHHH-----HcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHH
Confidence 3445555444 567788899999999999999999999999999999999999999988 8899999999999999
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
|+.+|+.+
T Consensus 181 A~~~~~~~ 188 (228)
T 2dzn_A 181 ALAEGHGD 188 (228)
T ss_dssp HHHTTCHH
T ss_pred HHHcCCHH
Confidence 99888754
No 41
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.46 E-value=9.6e-14 Score=134.74 Aligned_cols=85 Identities=15% Similarity=0.050 Sum_probs=74.8
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~A 269 (280)
...+.+|.+... +..++.+++++|++.|+++|.+|..|+||||+||.+|+.++|++||++|++++.+|..|+||||+|
T Consensus 170 ~g~t~Lh~A~~~--a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 247 (497)
T 3lvq_E 170 PEELVLHLAVKV--ANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 247 (497)
T ss_dssp SCBCHHHHHHHT--CCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHH
T ss_pred ccchHHHHHHHh--cccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 344556655320 246888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCC
Q 023608 270 CGYGEVC 276 (280)
Q Consensus 270 a~~G~~e 276 (280)
+.+||.+
T Consensus 248 ~~~~~~~ 254 (497)
T 3lvq_E 248 RKKHHKE 254 (497)
T ss_dssp HHTTCHH
T ss_pred HHcCCHH
Confidence 9999865
No 42
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.46 E-value=1.4e-13 Score=115.39 Aligned_cols=72 Identities=25% Similarity=0.319 Sum_probs=68.1
Q ss_pred hccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCCC
Q 023608 204 LAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED-SEGRTALHFACGYGEVC 276 (280)
Q Consensus 204 ~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D-~~G~TPLH~Aa~~G~~e 276 (280)
+..|+.++++.|++ |++++.+|..|+||||+||..|+.++|++|+++|++++.+| ..|+||||+|+.+|+.+
T Consensus 52 ~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~ 124 (183)
T 3deo_A 52 ARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE 124 (183)
T ss_dssp HHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHH
Confidence 37788899999999 99999999999999999999999999999999999999998 89999999999999865
No 43
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.46 E-value=9.4e-14 Score=113.51 Aligned_cols=98 Identities=17% Similarity=0.141 Sum_probs=79.6
Q ss_pred HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 172 PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 172 ~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
++++.+.+.+...-.......+.+|..+ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 56 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 130 (165)
T 3twr_A 56 SVVEYLLQHGADVHAKDKGGLVPLHNAC-----SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH 130 (165)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCCccCCCCCCHHHHHH-----HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3444444444443333344456666655 66888999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCC
Q 023608 252 GADKDEEDSEGRTALHFACGYGEV 275 (280)
Q Consensus 252 GAdvn~~D~~G~TPLH~Aa~~G~~ 275 (280)
|++++.+|..|+||||+|+. |+.
T Consensus 131 ga~~~~~~~~g~t~l~~a~~-~~~ 153 (165)
T 3twr_A 131 GADPTKKNRDGNTPLDLVKD-GDT 153 (165)
T ss_dssp TCCTTCCCTTSCCTGGGSCT-TCH
T ss_pred CCCCcccCCCCCChhHhHhc-CCh
Confidence 99999999999999999765 553
No 44
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.45 E-value=5.9e-14 Score=120.52 Aligned_cols=98 Identities=17% Similarity=0.036 Sum_probs=76.9
Q ss_pred HHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhC-CCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 173 ILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAG-ADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 173 i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~-gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
+++.+...+...........+.+|.++ ..++.+++++|++. |++++.+|..|+||||+||..|+.++|++|+++
T Consensus 88 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 162 (222)
T 3ehr_A 88 WLRECLDNRVGVNGLDKAGSTALYWAC-----HGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK 162 (222)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHhCCCCccccCCCCCCHHHHHH-----HcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 344444444443333344455666555 66788999999998 999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCC
Q 023608 252 GADKDEEDSEGRTALHFACGYGEV 275 (280)
Q Consensus 252 GAdvn~~D~~G~TPLH~Aa~~G~~ 275 (280)
|++++.+|..|+||||+|+..|+.
T Consensus 163 ga~~~~~~~~g~t~l~~A~~~~~~ 186 (222)
T 3ehr_A 163 GARTDLRNIEKKLAFDMATNAACA 186 (222)
T ss_dssp TCCSCCCCTTSCCHHHHCCSHHHH
T ss_pred CCCCccccCCCCCHHHHhcchhHH
Confidence 999999999999999999866543
No 45
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.45 E-value=3.5e-13 Score=114.73 Aligned_cols=100 Identities=17% Similarity=0.053 Sum_probs=82.0
Q ss_pred HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 172 PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 172 ~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
++++.+.+.+...-.......+.+|.++ ..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 106 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 180 (223)
T 2f8y_A 106 GMLEDLINSHADVNAVDDLGKSALHWAA-----AVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 180 (223)
T ss_dssp HHHHHHHHTTCCTTCBCTTSCBHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCcCcCCCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 3444444454443333344556666655 66788999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 252 GADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 252 GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
|++++.+|..|+||||+|+.+|+.+
T Consensus 181 ga~~~~~~~~g~t~l~~A~~~~~~~ 205 (223)
T 2f8y_A 181 FANRDITDHMDRLPRDIAQERMHHD 205 (223)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CCCCccccccCCCHHHHHHHhcchH
Confidence 9999999999999999999998864
No 46
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.45 E-value=1.2e-13 Score=120.80 Aligned_cols=69 Identities=19% Similarity=0.257 Sum_probs=36.7
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 023608 206 VGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE 274 (280)
Q Consensus 206 ~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~ 274 (280)
.|+.++++.|++.|++++.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+||.+|+
T Consensus 31 ~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 31 TGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp HTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 344455555555555555555555555555555555555555555555555555555555555555544
No 47
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.45 E-value=2.6e-13 Score=119.39 Aligned_cols=82 Identities=21% Similarity=0.215 Sum_probs=72.5
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccC-CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVG-NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALH 267 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D-~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH 267 (280)
....+.+|..+ ..|+.+++++|++.|++++.+| ..|+||||+||.+|+.++|++|+++|++++.+|..|+||||
T Consensus 75 ~~g~t~L~~A~-----~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~ 149 (244)
T 3ui2_A 75 ENGRTALLFVA-----GLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALE 149 (244)
T ss_dssp TTSCBHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCCCCHHHHHH-----HCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 34456666655 6688899999999999999998 88999999999999999999999999999999999999999
Q ss_pred HHHHcCCC
Q 023608 268 FACGYGEV 275 (280)
Q Consensus 268 ~Aa~~G~~ 275 (280)
+|+..++.
T Consensus 150 ~A~~~~~~ 157 (244)
T 3ui2_A 150 LAREILKT 157 (244)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 99975543
No 48
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.45 E-value=1e-13 Score=119.00 Aligned_cols=79 Identities=13% Similarity=0.092 Sum_probs=72.4
Q ss_pred hHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHH
Q 023608 193 DVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA-GADKDEEDSEGRTALHFACG 271 (280)
Q Consensus 193 ~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~-GAdvn~~D~~G~TPLH~Aa~ 271 (280)
+.++.++ ..|+.++++.|++.|++++.+|..|+||||+||..|+.++|++|++. |++++.+|..|+||||+||.
T Consensus 75 t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 75 NPLHEAA-----KRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp CHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccc-----ccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 4455444 66888999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred cCCCC
Q 023608 272 YGEVC 276 (280)
Q Consensus 272 ~G~~e 276 (280)
+|+.+
T Consensus 150 ~~~~~ 154 (222)
T 3ehr_A 150 KGYAD 154 (222)
T ss_dssp HTCHH
T ss_pred cCCHH
Confidence 99865
No 49
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.45 E-value=2.6e-13 Score=128.08 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=84.4
Q ss_pred ChHHHHHHHHcCChhhhhhh--cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHH
Q 023608 169 SLKPILDEIESGGPSAMMKY--WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLK 246 (280)
Q Consensus 169 ~~~~i~e~i~~~g~~al~~~--~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk 246 (280)
+-..++..+...+....... ....+.+|.++ ..++.+++++|++.|+++|.+|..|+||||+|+..|+.++|+
T Consensus 211 g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa-----~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~ 285 (368)
T 3jue_A 211 PSLPTMADALAHGADVNWVNGGQDNATPLIQAT-----AANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLAC 285 (368)
T ss_dssp CCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccccccCCCCHHHHHH-----HCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHH
Confidence 43445555555555443332 34445666555 668889999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 247 NALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 247 ~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+||++|++++.+|..|+||||+|+..|+.+
T Consensus 286 ~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~ 315 (368)
T 3jue_A 286 LFLKRGADLGARDSEGRDPLTIAMETANAD 315 (368)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHCcCCCCCcCCCCCCHHHHHHHCCCHH
Confidence 999999999999999999999999998864
No 50
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.45 E-value=1.8e-13 Score=124.91 Aligned_cols=70 Identities=16% Similarity=0.063 Sum_probs=67.5
Q ss_pred CCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 207 GGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 207 g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+..+++++|++.|+++|.+|..|+||||+|+.+|+.++|++||++|++++.+|..|+||||+|+.+|+.+
T Consensus 204 ~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~ 273 (301)
T 2b0o_E 204 ASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 273 (301)
T ss_dssp TTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHH
T ss_pred CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 6789999999999999999999999999999999999999999999999999999999999999998864
No 51
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.45 E-value=1.9e-13 Score=105.54 Aligned_cols=72 Identities=26% Similarity=0.314 Sum_probs=68.6
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++.+++++|++.|.+++..|..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 11 ~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 82 (126)
T 1n0r_A 11 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82 (126)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHH
Confidence 567889999999999999999999999999999999999999999999999999999999999999998764
No 52
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.44 E-value=1.4e-13 Score=122.31 Aligned_cols=71 Identities=17% Similarity=0.223 Sum_probs=43.6
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEV 275 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~ 275 (280)
..|+.++++.|++.|+++|..|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+.+|++
T Consensus 49 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~ 119 (299)
T 1s70_B 49 SSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119 (299)
T ss_dssp HHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence 44555666666666666666666666666666666666666666666666666666666666666665554
No 53
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.44 E-value=1.5e-13 Score=126.35 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=81.0
Q ss_pred HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCC-----ccccCCCCCcHHHHHHhcCCHHHHH
Q 023608 172 PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADE-----AEEVGNEDESIVHHTASVGDAEGLK 246 (280)
Q Consensus 172 ~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gad-----vn~~D~~g~TpLh~Aa~~G~~eivk 246 (280)
++++.+...+...-.......+.++.++ ..++.+++++|++.|++ +|..|..|+||||+||..|+.++|+
T Consensus 154 ~~v~~Ll~~ga~~~~~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 228 (364)
T 3ljn_A 154 EMIKILVQLGASPTAKDKADETPLMRAM-----EFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAM 228 (364)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHH
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHH-----HcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHH
Confidence 3334444334333333334455565555 67888999999999999 9999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 247 NALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 247 ~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+||++|++++.+|..|+||||+|+.+|+.+
T Consensus 229 ~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~ 258 (364)
T 3ljn_A 229 RFVEMGIDVNMEDNEHTVPLYLSVRAAMVL 258 (364)
T ss_dssp HHHTTTCCTTCCCTTSCCHHHHHHHTCCHH
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhChHH
Confidence 999999999999999999999999999865
No 54
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.44 E-value=2.1e-13 Score=119.13 Aligned_cols=99 Identities=12% Similarity=-0.017 Sum_probs=80.4
Q ss_pred HHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 023608 173 ILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG 252 (280)
Q Consensus 173 i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~G 252 (280)
+++.+.+.+...-.......+.+|..+ ..++.+++++|++.|+++|.+|..|+||||+||..|+.++|++|+++|
T Consensus 52 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~-----~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 126 (239)
T 1ycs_B 52 LVQRIIYEVDDPSLPNDEGITALHNAV-----CAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG 126 (239)
T ss_dssp HHHHHTSTTSSCCCCCTTSCCHHHHHH-----HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 344444444433333344456666655 668889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCC-cHHHHH--HHcCCCC
Q 023608 253 ADKDEEDSEGR-TALHFA--CGYGEVC 276 (280)
Q Consensus 253 Advn~~D~~G~-TPLH~A--a~~G~~e 276 (280)
++++.+|..|. ||||+| +..|+.+
T Consensus 127 a~~~~~~~~~~~t~l~~a~~~~~g~~~ 153 (239)
T 1ycs_B 127 AAVFAMTYSDMQTAADKCEEMEEGYTQ 153 (239)
T ss_dssp CCTTCCCSSSCCCHHHHCCSSSTTCCC
T ss_pred CCcceecCCCCcchHHHHHHhhhccHH
Confidence 99999998887 999999 6677765
No 55
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.44 E-value=2.7e-13 Score=118.84 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=73.9
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
....+.++.++ ..+..+++++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+
T Consensus 122 ~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~ 196 (253)
T 1yyh_A 122 HDGTTPLILAA-----RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFL 196 (253)
T ss_dssp TTCCCHHHHHH-----HHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCcHHHHHH-----HcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 33445555555 5577789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
|+.+|+.+
T Consensus 197 A~~~~~~~ 204 (253)
T 1yyh_A 197 AAREGSYE 204 (253)
T ss_dssp HHHHTCHH
T ss_pred HHHCCCHH
Confidence 99998864
No 56
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.44 E-value=1.9e-13 Score=120.48 Aligned_cols=99 Identities=15% Similarity=0.074 Sum_probs=65.4
Q ss_pred HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 172 PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 172 ~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
++++.+.+.+...-.......+.+|..+ ..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 17 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 91 (261)
T 2xai_A 17 LSLRNLISQGWAVNIITADHVSPLHEAC-----LGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH 91 (261)
T ss_dssp HHHHHHHHTTCCSSCCCTTCCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 3444444444443333334445555444 45667777777777777777777777888888777778888877777
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 252 GADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 252 GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
|++++. +..|+||||+|+.+|+.+
T Consensus 92 g~~~~~-~~~g~t~L~~A~~~~~~~ 115 (261)
T 2xai_A 92 GASVQP-ESDLASPIHEAARRGHVE 115 (261)
T ss_dssp TCCSSC-SCTTCCHHHHHHHTTCHH
T ss_pred CCCCCC-CCCCCCHHHHHHHcCcHH
Confidence 777764 344777888877777654
No 57
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.43 E-value=2e-13 Score=120.02 Aligned_cols=72 Identities=25% Similarity=0.319 Sum_probs=68.3
Q ss_pred hccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCCC
Q 023608 204 LAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED-SEGRTALHFACGYGEVC 276 (280)
Q Consensus 204 ~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D-~~G~TPLH~Aa~~G~~e 276 (280)
+..|+.++++.|++ |+++|.+|..|+||||+||..|+.++|++|+++|++++.+| ..|+||||+||.+|+++
T Consensus 53 ~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~ 125 (244)
T 3ui2_A 53 ARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE 125 (244)
T ss_dssp HTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 47788999999999 99999999999999999999999999999999999999998 88999999999999865
No 58
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.43 E-value=1.6e-13 Score=119.93 Aligned_cols=82 Identities=11% Similarity=0.094 Sum_probs=73.3
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHh---CCCCccccCCCCCcHHHHHHhcCC---------HHHHHHHHHcCCCC--
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNA---GADEAEEVGNEDESIVHHTASVGD---------AEGLKNALAAGADK-- 255 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~---~gadvn~~D~~g~TpLh~Aa~~G~---------~eivk~LL~~GAdv-- 255 (280)
...+.+|..+ ..++.+++++|++ .|++++.+|..|+||||+||..++ .+++++|+++|+++
T Consensus 139 ~g~tpL~~A~-----~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~ 213 (260)
T 3jxi_A 139 FGELPLSLAA-----CTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFP 213 (260)
T ss_dssp SCSSHHHHHH-----HTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHH-----HcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccccc
Confidence 3455666555 6788899999999 999999999999999999999888 79999999999998
Q ss_pred -----CCCCCCCCcHHHHHHHcCCCC
Q 023608 256 -----DEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 256 -----n~~D~~G~TPLH~Aa~~G~~e 276 (280)
+.+|..|+||||+|+.+|+++
T Consensus 214 ~~~~~~~~d~~g~tpL~~A~~~g~~~ 239 (260)
T 3jxi_A 214 DTNLEALLNNDGLSPLMMAAKTGKIG 239 (260)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred ccchhhcccCCCCCHHHHHHHcCCHH
Confidence 779999999999999999875
No 59
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.43 E-value=5.4e-13 Score=114.16 Aligned_cols=66 Identities=20% Similarity=0.112 Sum_probs=35.4
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 023608 206 VGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACG 271 (280)
Q Consensus 206 ~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~ 271 (280)
.++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 149 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 149 KGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred cCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 344455555555555555555555555555555555555555555555555555555555555543
No 60
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.43 E-value=1.2e-13 Score=117.73 Aligned_cols=62 Identities=15% Similarity=0.043 Sum_probs=33.1
Q ss_pred HHHHHHhCCCCccccCCCCCcHHHHHHhcCC------HHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHc
Q 023608 211 TTSADNAGADEAEEVGNEDESIVHHTASVGD------AEGLKNALAAGADKDEEDSEGR-TALHFACGY 272 (280)
Q Consensus 211 ~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~------~eivk~LL~~GAdvn~~D~~G~-TPLH~Aa~~ 272 (280)
++++|++.|+++|.+|..|+||||+|+.+++ .++|++||++|++||.+|..|+ ||||+|+.+
T Consensus 57 iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~ 125 (186)
T 3t8k_A 57 ISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNY 125 (186)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGC
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHc
Confidence 4555555555555555555555555555544 3445555555555555555555 555555543
No 61
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.43 E-value=4.5e-13 Score=114.03 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=74.3
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
....+.++.++ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 90 ~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 164 (223)
T 2f8y_A 90 HDGTTPLILAA-----RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFL 164 (223)
T ss_dssp TTCCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CCCCcHHHHHH-----HhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHH
Confidence 33445565555 5678899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
|+.+|+.+
T Consensus 165 A~~~~~~~ 172 (223)
T 2f8y_A 165 AAREGSYE 172 (223)
T ss_dssp HHHHTCHH
T ss_pred HHHcCCHH
Confidence 99998764
No 62
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.43 E-value=6.4e-14 Score=119.37 Aligned_cols=105 Identities=12% Similarity=-0.017 Sum_probs=80.1
Q ss_pred HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhh-ccCCHHHHHHHHhCCCCccccCCCCC-cHHHHHHhcC-----CHHH
Q 023608 172 PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGL-AVGGDATTSADNAGADEAEEVGNEDE-SIVHHTASVG-----DAEG 244 (280)
Q Consensus 172 ~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~-~~g~~~~v~~Ll~~gadvn~~D~~g~-TpLh~Aa~~G-----~~ei 244 (280)
.+++.+.+.|...-.+.....+.+|.++..-.. .....+++++|+++|+++|.+|..|+ ||||+|+..+ +.++
T Consensus 56 ~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~i 135 (186)
T 3t8k_A 56 KISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPL 135 (186)
T ss_dssp HHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHH
Confidence 345556666666555555555666665522100 00124789999999999999999999 9999999954 4579
Q ss_pred HHHHHH-cCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 245 LKNALA-AGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 245 vk~LL~-~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+++|++ +|++++.+|..|+||||+|+.+|+.+
T Consensus 136 v~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~ 168 (186)
T 3t8k_A 136 YKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPI 168 (186)
T ss_dssp HHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHH
T ss_pred HHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence 999999 99999999999999999999998754
No 63
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.43 E-value=2e-13 Score=119.34 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=73.3
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHh---CCCCccccCCCCCcHHHHHHh--cCCHH-------HHHHHHHcCCCC---
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNA---GADEAEEVGNEDESIVHHTAS--VGDAE-------GLKNALAAGADK--- 255 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~---~gadvn~~D~~g~TpLh~Aa~--~G~~e-------ivk~LL~~GAdv--- 255 (280)
..+.+|..+ ..++.+++++|++ .|++++.+|..|+||||+||. .++.+ ++++|+++|+++
T Consensus 136 g~tpL~~A~-----~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~ 210 (256)
T 2etb_A 136 GELPLSLAA-----CTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPT 210 (256)
T ss_dssp CSSHHHHHH-----HTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred CCCHHHHHH-----HcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccc
Confidence 455666555 6688899999999 999999999999999999998 88888 999999999999
Q ss_pred ----CCCCCCCCcHHHHHHHcCCCC
Q 023608 256 ----DEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 256 ----n~~D~~G~TPLH~Aa~~G~~e 276 (280)
+.+|..|+||||+|+.+|+.+
T Consensus 211 ~~~~~~~d~~g~tpL~~A~~~g~~~ 235 (256)
T 2etb_A 211 VQLEEISNHQGLTPLKLAAKEGKIE 235 (256)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred cccccccCCCCCCHHHHHHHhCCHH
Confidence 999999999999999999865
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.43 E-value=1.1e-13 Score=114.91 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=79.9
Q ss_pred HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 172 PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 172 ~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
++++.+.+.+...-.......+.+|..+ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 53 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 127 (179)
T 3f6q_A 53 AVVEMLIMRGARINVMNRGDDTPLHLAA-----SHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN 127 (179)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 3344444444443333344456666655 66888999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCC
Q 023608 252 GADKDEEDSEGRTALHFACGYGE 274 (280)
Q Consensus 252 GAdvn~~D~~G~TPLH~Aa~~G~ 274 (280)
|++++.+|..|+||||+|+..++
T Consensus 128 ga~~~~~~~~g~tpl~~A~~~~~ 150 (179)
T 3f6q_A 128 GALVSICNKYGEMPVDKAKAPLR 150 (179)
T ss_dssp TCCSSBCCTTSCCGGGGSCHHHH
T ss_pred CCCcchhccCCCCcHHHHHHHHH
Confidence 99999999999999999986544
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.43 E-value=3.9e-13 Score=117.45 Aligned_cols=80 Identities=14% Similarity=0.046 Sum_probs=72.2
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccC--------------CCCCcHHHHHHhcCCHHHHHHHHH---cC
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVG--------------NEDESIVHHTASVGDAEGLKNALA---AG 252 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D--------------~~g~TpLh~Aa~~G~~eivk~LL~---~G 252 (280)
...+.+|..+ ..|+.+++++|++.|++++.+| ..|+||||+||..|+.++|++|++ +|
T Consensus 92 ~g~t~L~~A~-----~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 92 RGQTALHIAI-----ERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp ESBCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred CCCCHHHHHH-----HcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 4445666555 6788999999999999999999 689999999999999999999999 99
Q ss_pred CCCCCCCCCCCcHHHHHHHcCC
Q 023608 253 ADKDEEDSEGRTALHFACGYGE 274 (280)
Q Consensus 253 Advn~~D~~G~TPLH~Aa~~G~ 274 (280)
++++.+|..|+||||+||.+|+
T Consensus 167 a~~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 167 ADLRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCC
T ss_pred CCCcccCCCCCcHHHHHHHhcc
Confidence 9999999999999999998765
No 66
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.43 E-value=3.9e-13 Score=117.78 Aligned_cols=72 Identities=18% Similarity=0.070 Sum_probs=59.5
Q ss_pred ccCCHHHHHHHHhCCCCccccCCC-CCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNE-DESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~-g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++.+++++|++.|++++..+.. |+||||+||.+|+.++|++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 167 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 239 (282)
T 1oy3_D 167 IHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPI 239 (282)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHH
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcH
Confidence 567778888888888888888754 888888888888888888888888888888888888888888877754
No 67
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.42 E-value=2.6e-13 Score=116.62 Aligned_cols=99 Identities=17% Similarity=0.110 Sum_probs=76.8
Q ss_pred HHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 023608 173 ILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG 252 (280)
Q Consensus 173 i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~G 252 (280)
+++.+.+.+...-.........++..+ ..+..+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 126 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 200 (237)
T 3b7b_A 126 LVKLLLSKGSDINIRDNEENICLHWAA-----FSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD 200 (237)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHH-----HHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHHHHHHCCCCCCccCCCCCCHHHHHH-----HCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcC
Confidence 344444444433333334445555554 557788999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 253 ADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 253 Advn~~D~~G~TPLH~Aa~~G~~e 276 (280)
++++.+|..|+||||+|+.+|+++
T Consensus 201 ad~~~~d~~g~t~l~~A~~~~~~~ 224 (237)
T 3b7b_A 201 SDVTLKNKEGETPLQCASLNSQVW 224 (237)
T ss_dssp CCTTCCCTTSCCHHHHSCTTCHHH
T ss_pred CCCCccCCCCCCHHHHHHHHHHHH
Confidence 999999999999999998887653
No 68
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.42 E-value=4.8e-13 Score=112.06 Aligned_cols=82 Identities=16% Similarity=0.167 Sum_probs=73.1
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCC-CCccccCCCCCcHHHHHHhcCC-----HHHHHHHHHcCCCCCCCCCCCC
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGA-DEAEEVGNEDESIVHHTASVGD-----AEGLKNALAAGADKDEEDSEGR 263 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~g-advn~~D~~g~TpLh~Aa~~G~-----~eivk~LL~~GAdvn~~D~~G~ 263 (280)
...+.++..+ ..++.+++++|++.| ++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+
T Consensus 105 ~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 179 (201)
T 3hra_A 105 YGGNALIPAA-----EKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGR 179 (201)
T ss_dssp TSCCSHHHHH-----HTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCcHHHHHH-----HcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCC
Confidence 3445565555 668889999999998 9999999999999999999998 9999999999999999999999
Q ss_pred cHHHHHHHcCCCC
Q 023608 264 TALHFACGYGEVC 276 (280)
Q Consensus 264 TPLH~Aa~~G~~e 276 (280)
||||+|+.+|+.+
T Consensus 180 t~l~~A~~~~~~~ 192 (201)
T 3hra_A 180 TAMDYANQKGYTE 192 (201)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHh
Confidence 9999999998865
No 69
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.42 E-value=1e-13 Score=113.00 Aligned_cols=79 Identities=19% Similarity=0.112 Sum_probs=71.3
Q ss_pred hhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCc-HHHHHH
Q 023608 192 KDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRT-ALHFAC 270 (280)
Q Consensus 192 ~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~T-PLH~Aa 270 (280)
.+.++..+ ..++.+++++|++.|++++.+|..|+||||+|+ .|+.++|++|+++|++++.+|..|+| |||+|+
T Consensus 13 ~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 13 ADWLATAA-----ARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAA 86 (156)
T ss_dssp TTHHHHHH-----HHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHH
T ss_pred hHHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 34555555 668889999999999999999999999999986 99999999999999999999999999 999999
Q ss_pred HcCCCC
Q 023608 271 GYGEVC 276 (280)
Q Consensus 271 ~~G~~e 276 (280)
.+|+++
T Consensus 87 ~~~~~~ 92 (156)
T 1bi7_B 87 REGFLD 92 (156)
T ss_dssp HHTCHH
T ss_pred HCCCHH
Confidence 998864
No 70
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.42 E-value=7.2e-13 Score=119.18 Aligned_cols=81 Identities=17% Similarity=0.028 Sum_probs=73.9
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFAC 270 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa 270 (280)
..+.+|..+ ..|+.+++++|++.|++++.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+
T Consensus 58 g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~ 132 (351)
T 3utm_A 58 KSTPLHLAA-----GYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAA 132 (351)
T ss_dssp CCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCHHHHHH-----HcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 345566555 678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCC
Q 023608 271 GYGEVC 276 (280)
Q Consensus 271 ~~G~~e 276 (280)
.+|+++
T Consensus 133 ~~~~~~ 138 (351)
T 3utm_A 133 SKNRVE 138 (351)
T ss_dssp HTTCHH
T ss_pred HcCCHH
Confidence 998865
No 71
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.41 E-value=1e-13 Score=118.99 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=60.5
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFAC 270 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa 270 (280)
..+.++.++ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 150 g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 224 (241)
T 1k1a_A 150 GRSPLIHAV-----ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 224 (241)
T ss_dssp CCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCS
T ss_pred CCcHHHHHH-----HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHH
Confidence 334454444 556777888888888888888888888888888888888888888888888888888888888877
Q ss_pred HcCCC
Q 023608 271 GYGEV 275 (280)
Q Consensus 271 ~~G~~ 275 (280)
.+|+.
T Consensus 225 ~~~~~ 229 (241)
T 1k1a_A 225 SRRVI 229 (241)
T ss_dssp SHHHH
T ss_pred hcCcH
Confidence 66554
No 72
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.41 E-value=6.6e-13 Score=113.87 Aligned_cols=82 Identities=11% Similarity=0.069 Sum_probs=73.3
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHH----HHHHHcCCCC------CCCC
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGL----KNALAAGADK------DEED 259 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eiv----k~LL~~GAdv------n~~D 259 (280)
...+.+|..+ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++ ++|+++|+++ +.+|
T Consensus 120 ~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~ 194 (232)
T 2rfa_A 120 YGEHPLSFAA-----CVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPN 194 (232)
T ss_dssp CCSSHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCC
T ss_pred CCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCC
Confidence 3455566555 56788999999999999999999999999999999999988 9999999988 5899
Q ss_pred CCCCcHHHHHHHcCCCC
Q 023608 260 SEGRTALHFACGYGEVC 276 (280)
Q Consensus 260 ~~G~TPLH~Aa~~G~~e 276 (280)
..|+||||+|+.+|+.+
T Consensus 195 ~~g~tpl~~A~~~g~~~ 211 (232)
T 2rfa_A 195 NQGLTPFKLAGVEGNIV 211 (232)
T ss_dssp TTSCCHHHHHHHHTCHH
T ss_pred CCCCCHHHHHHHcCCHH
Confidence 99999999999999865
No 73
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.41 E-value=6.3e-13 Score=116.10 Aligned_cols=80 Identities=14% Similarity=-0.013 Sum_probs=71.4
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCC-------------CCcHHHHHHhcCCHHHHHHHHH---cCCC
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNE-------------DESIVHHTASVGDAEGLKNALA---AGAD 254 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~-------------g~TpLh~Aa~~G~~eivk~LL~---~GAd 254 (280)
..+.+|.++ ..++.+++++|++.|++++.+|.. |+||||+||..|+.++|++|++ +|++
T Consensus 90 g~t~L~~A~-----~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~ 164 (256)
T 2etb_A 90 GHSALHIAI-----EKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS 164 (256)
T ss_dssp TCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred CCCHHHHHH-----HcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 345555555 678899999999999999999986 9999999999999999999999 9999
Q ss_pred CCCCCCCCCcHHHHHHH--cCCC
Q 023608 255 KDEEDSEGRTALHFACG--YGEV 275 (280)
Q Consensus 255 vn~~D~~G~TPLH~Aa~--~G~~ 275 (280)
++.+|..|+||||+||. .++.
T Consensus 165 ~n~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 165 LEATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCH
T ss_pred cCccCCCCCCHHHHHHHcccCCc
Confidence 99999999999999998 5554
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.41 E-value=1.7e-13 Score=119.94 Aligned_cols=96 Identities=13% Similarity=-0.026 Sum_probs=77.7
Q ss_pred HHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 023608 176 EIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADK 255 (280)
Q Consensus 176 ~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdv 255 (280)
.+.+.+...-.......+.++.++ ..++.+++++|++.|++++.+|..|+||||+||..|+.++|++|+++|+++
T Consensus 39 ~Ll~~g~~~~~~d~~g~tpLh~A~-----~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 113 (229)
T 2vge_A 39 QAVKEMNDPSQPNEEGITALHNAI-----CGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAI 113 (229)
T ss_dssp HHHHHSSCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred HHHhcCCCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 333333333333344456666555 668899999999999999999999999999999999999999999999999
Q ss_pred CCCC-CCCCcHHHHH--HHcCCCC
Q 023608 256 DEED-SEGRTALHFA--CGYGEVC 276 (280)
Q Consensus 256 n~~D-~~G~TPLH~A--a~~G~~e 276 (280)
+.++ ..|+||||+| +..|+.+
T Consensus 114 ~~~~~~~g~tpL~~A~a~~~~~~~ 137 (229)
T 2vge_A 114 FATTLSDGATAFEKCDPYREGYAD 137 (229)
T ss_dssp TCCCSSTTCCTGGGCCTTSTTHHH
T ss_pred ccccCCCCCCHHHHHHHHhcChHH
Confidence 9987 6999999999 7766543
No 75
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.40 E-value=1.2e-12 Score=111.54 Aligned_cols=83 Identities=14% Similarity=0.073 Sum_probs=74.2
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCC--CCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGA--DEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTAL 266 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~g--advn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPL 266 (280)
....+.++.++ ..++.++++.|++.| ++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 70 ~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 144 (228)
T 2dzn_A 70 DSGWTPFHIAC-----SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPL 144 (228)
T ss_dssp TTSCCHHHHHH-----HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred CCCCCHHHHHH-----HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHH
Confidence 34445566555 567889999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCC
Q 023608 267 HFACGYGEVC 276 (280)
Q Consensus 267 H~Aa~~G~~e 276 (280)
|+|+.+|+++
T Consensus 145 ~~A~~~~~~~ 154 (228)
T 2dzn_A 145 HRAASVGSLK 154 (228)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHcCCHH
Confidence 9999998764
No 76
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.40 E-value=3.9e-13 Score=118.72 Aligned_cols=82 Identities=16% Similarity=0.131 Sum_probs=73.0
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHh---CCCCccccCCCCCcHHHHHHhcCC---------HHHHHHHHHcCCCCC-
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNA---GADEAEEVGNEDESIVHHTASVGD---------AEGLKNALAAGADKD- 256 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~---~gadvn~~D~~g~TpLh~Aa~~G~---------~eivk~LL~~GAdvn- 256 (280)
...+.+|..+ ..++.+++++|++ .|++++.+|..|+||||+||..|+ .+++++|+++|++++
T Consensus 147 ~g~tpL~~A~-----~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 147 FGELPLSLAA-----CTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHP 221 (273)
T ss_dssp SCBSHHHHHH-----HTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCHHHHHH-----HcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccc
Confidence 3455666555 6688899999999 999999999999999999999998 899999999999997
Q ss_pred ------CCCCCCCcHHHHHHHcCCCC
Q 023608 257 ------EEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 257 ------~~D~~G~TPLH~Aa~~G~~e 276 (280)
.+|..|+||||+|+.+|+.+
T Consensus 222 ~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 222 TLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred ccccccccCCCCCCHHHHHHHhChHH
Confidence 48999999999999999865
No 77
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.40 E-value=8.1e-13 Score=113.34 Aligned_cols=81 Identities=19% Similarity=0.153 Sum_probs=72.8
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccC-CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVG-NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D-~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~A 269 (280)
....++..+ ..++.+++++|++.|++++..+ ..|.||||+|+.+|+.+++++|+++|++++.+|..|+||||+|
T Consensus 116 g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 190 (241)
T 1k1a_A 116 GLTALHVAV-----NTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSA 190 (241)
T ss_dssp SCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred CCcHHHHHH-----HcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 345555544 5678899999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HHcCCCC
Q 023608 270 CGYGEVC 276 (280)
Q Consensus 270 a~~G~~e 276 (280)
+.+|+++
T Consensus 191 ~~~~~~~ 197 (241)
T 1k1a_A 191 SGRGLLP 197 (241)
T ss_dssp HHHTCHH
T ss_pred HHcCCHH
Confidence 9998864
No 78
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.40 E-value=1.3e-12 Score=112.25 Aligned_cols=100 Identities=15% Similarity=0.050 Sum_probs=80.3
Q ss_pred HHHHHHHcCChhhh-hhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 023608 172 PILDEIESGGPSAM-MKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALA 250 (280)
Q Consensus 172 ~i~e~i~~~g~~al-~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~ 250 (280)
++++.+.+.++... .........++.++ ..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++
T Consensus 91 ~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 165 (237)
T 3b7b_A 91 EVVQYLLSNGQMDVNCQDDGGWTPMIWAT-----EYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLA 165 (237)
T ss_dssp HHHHHHHTTTCCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHT
T ss_pred HHHHHHHhCCCCCcccCCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 34444554442222 22233445555554 6678899999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 251 AGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 251 ~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+|++++.+|..|+||||+|+.+|+.+
T Consensus 166 ~g~~~~~~~~~g~t~L~~A~~~~~~~ 191 (237)
T 3b7b_A 166 AKCDLHAVNIHGDSPLHIAARENRYD 191 (237)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred cCCCCCCcCCCCCCHHHHHHHhCCHh
Confidence 99999999999999999999998764
No 79
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.40 E-value=1.3e-12 Score=111.73 Aligned_cols=72 Identities=25% Similarity=0.235 Sum_probs=56.5
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+++
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 153 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK 153 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 456677788888888888888888888888888888888888888888888888888888888888777654
No 80
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.40 E-value=8.5e-13 Score=116.53 Aligned_cols=79 Identities=18% Similarity=0.090 Sum_probs=71.6
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCC--------------CCCcHHHHHHhcCCHHHHHHHHH---cCC
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGN--------------EDESIVHHTASVGDAEGLKNALA---AGA 253 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~--------------~g~TpLh~Aa~~G~~eivk~LL~---~GA 253 (280)
..+.++..+ ..++.+++++|++.|++++.++. .|+||||+||..|+.++|++|++ +|+
T Consensus 101 g~tpL~~A~-----~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga 175 (273)
T 2pnn_A 101 GQTALHIAI-----ERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA 175 (273)
T ss_dssp TCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred CCCHHHHHH-----HcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC
Confidence 345555554 67889999999999999999997 79999999999999999999999 999
Q ss_pred CCCCCCCCCCcHHHHHHHcCC
Q 023608 254 DKDEEDSEGRTALHFACGYGE 274 (280)
Q Consensus 254 dvn~~D~~G~TPLH~Aa~~G~ 274 (280)
+++.+|..|+||||+||.+|+
T Consensus 176 d~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 176 DISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp CTTCCCTTSCCHHHHHHHHCC
T ss_pred CceeeCCCCCcHHHHHHHccC
Confidence 999999999999999999876
No 81
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.40 E-value=3.5e-13 Score=116.31 Aligned_cols=82 Identities=12% Similarity=0.118 Sum_probs=73.6
Q ss_pred CchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCC-CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 190 NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGN-EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 190 ~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~-~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
...+.+|..+ ..++.+++++|++.|++++.++. .|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 116 ~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 190 (236)
T 1ikn_D 116 NGHTCLHLAS-----IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 190 (236)
T ss_dssp TCCCHHHHHH-----HTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGG
T ss_pred CCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHH
Confidence 3445565555 66888999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
|+.+|+.+
T Consensus 191 A~~~~~~~ 198 (236)
T 1ikn_D 191 TWGRPSTR 198 (236)
T ss_dssp CTTSSCHH
T ss_pred HHccCchH
Confidence 99988764
No 82
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.39 E-value=4.7e-13 Score=119.75 Aligned_cols=86 Identities=20% Similarity=0.130 Sum_probs=72.7
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFAC 270 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa 270 (280)
..+.++..+.......++.++++.|++.|++++..|..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+||
T Consensus 145 g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~ 224 (276)
T 4hbd_A 145 GYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCAC 224 (276)
T ss_dssp SCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Confidence 34445444422222445668999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCC
Q 023608 271 GYGEVC 276 (280)
Q Consensus 271 ~~G~~e 276 (280)
.+|+.+
T Consensus 225 ~~g~~~ 230 (276)
T 4hbd_A 225 EHGHKE 230 (276)
T ss_dssp HHTCHH
T ss_pred HCCCHH
Confidence 998864
No 83
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.39 E-value=1.4e-12 Score=113.71 Aligned_cols=99 Identities=20% Similarity=0.151 Sum_probs=81.0
Q ss_pred HHHHHHcCChhhhhh-hcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 173 ILDEIESGGPSAMMK-YWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 173 i~e~i~~~g~~al~~-~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
+++.+.+.+...... .....+.++..+ ..++.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++
T Consensus 20 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 94 (285)
T 1wdy_A 20 LVQQLLEGGANVNFQEEEGGWTPLHNAV-----QMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSK 94 (285)
T ss_dssp HHHHHHHTTCCTTCCCTTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHcCCCcccccCCCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 344444444443322 233345566555 66888999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 252 GADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 252 GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
|++++.+|..|+||||+|+.+|+.+
T Consensus 95 g~~~~~~~~~g~t~L~~A~~~~~~~ 119 (285)
T 1wdy_A 95 GADVNECDFYGFTAFMEAAVYGKVK 119 (285)
T ss_dssp TCCTTCBCTTCCBHHHHHHHTTCHH
T ss_pred CCCCCccCcccCCHHHHHHHhCCHH
Confidence 9999999999999999999998864
No 84
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.39 E-value=7.1e-13 Score=124.51 Aligned_cols=71 Identities=21% Similarity=0.185 Sum_probs=50.8
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEV 275 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~ 275 (280)
..++.++|++|++.|+++|.+|..|+||||+|+.+|+.++|++|+++|++++.+|.+|+||||+|+..|+.
T Consensus 320 ~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~ 390 (437)
T 1n11_A 320 HYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI 390 (437)
T ss_dssp HSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCH
T ss_pred HcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcH
Confidence 45566677777777777777777777777777777777777777777777777777777777777776664
No 85
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.38 E-value=7.8e-13 Score=118.72 Aligned_cols=97 Identities=8% Similarity=0.060 Sum_probs=77.4
Q ss_pred HHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 023608 173 ILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG 252 (280)
Q Consensus 173 i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~G 252 (280)
+++.+.+.+...-.. +..+.+|.++ ..++.+++++|++.|++++.+|..|+||||+||..|+.++|++|+++|
T Consensus 46 ~v~~Ll~~g~~~~~~--~g~t~L~~A~-----~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 118 (285)
T 3kea_A 46 LVCTLLNAGALKNLL--ENEFPLHQAA-----TLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN 118 (285)
T ss_dssp HHHHHHHTTGGGSCC--TTCCHHHHHT-----TSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCCCC--CCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 344444444433222 2344555444 678889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCC-CcHHHHHHHcCCCC
Q 023608 253 ADKDEEDSEG-RTALHFACGYGEVC 276 (280)
Q Consensus 253 Advn~~D~~G-~TPLH~Aa~~G~~e 276 (280)
++++.+|..| +||||+|+.+|+.+
T Consensus 119 a~~~~~~~~g~~t~L~~A~~~~~~~ 143 (285)
T 3kea_A 119 WRLMFYGKTGWKTSFYHAVMLNDVS 143 (285)
T ss_dssp GGGGGCSSSGGGSHHHHHHHTTCHH
T ss_pred CCCCccCCCCCCCHHHHHHHcCCHH
Confidence 9999999999 79999999988764
No 86
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.38 E-value=8.6e-13 Score=118.29 Aligned_cols=83 Identities=17% Similarity=0.111 Sum_probs=56.8
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
+.+.+.++..+ ..|+.++++.|++.|++++.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+
T Consensus 57 ~~g~t~L~~Aa-----~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~ 131 (285)
T 3d9h_A 57 VSDWSPMHEAA-----IHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFN 131 (285)
T ss_dssp CCSCCHHHHHH-----HTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHH
T ss_pred ccCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 34445555444 5566677777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
|+.+|+++
T Consensus 132 A~~~~~~~ 139 (285)
T 3d9h_A 132 ACVSGSWD 139 (285)
T ss_dssp HHHHTCHH
T ss_pred HHHcCHHH
Confidence 77766543
No 87
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.37 E-value=2.7e-12 Score=107.50 Aligned_cols=70 Identities=23% Similarity=0.191 Sum_probs=54.3
Q ss_pred ccCCHHHHHHHH-hCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCC
Q 023608 205 AVGGDATTSADN-AGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDSEGRTALHFACGYGE 274 (280)
Q Consensus 205 ~~g~~~~v~~Ll-~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~G-Advn~~D~~G~TPLH~Aa~~G~ 274 (280)
..++.+++++|+ ..+.+++..|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.++.
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLRE 152 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSC
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhcc
Confidence 556777777777 667777888888888888888888888888888877 7788888888888888877665
No 88
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.37 E-value=4.8e-13 Score=118.81 Aligned_cols=81 Identities=19% Similarity=0.097 Sum_probs=72.6
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
....+.+|.++ ..|+.+++++|++.|++++..|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 71 ~~g~t~L~~A~-----~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 145 (299)
T 1s70_B 71 VDGLTALHQAC-----IDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDI 145 (299)
T ss_dssp TTCCBHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHH
Confidence 34456666655 6788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCC
Q 023608 269 ACGYGE 274 (280)
Q Consensus 269 Aa~~G~ 274 (280)
|+..++
T Consensus 146 A~~~~~ 151 (299)
T 1s70_B 146 AEEEAM 151 (299)
T ss_dssp CCSHHH
T ss_pred HHhcch
Confidence 986654
No 89
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.37 E-value=1.4e-12 Score=122.46 Aligned_cols=103 Identities=14% Similarity=0.069 Sum_probs=87.0
Q ss_pred ChHHHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHH
Q 023608 169 SLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNA 248 (280)
Q Consensus 169 ~~~~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~L 248 (280)
+..++++.+.+.+...-.......+.++.++ ..++.+++++|++.|++++.+|..|+||||+|+.+|+.++|++|
T Consensus 256 g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 330 (437)
T 1n11_A 256 GHAEMVALLLSKQANGNLGNKSGLTPLHLVA-----QEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL 330 (437)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH-----HHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHH
T ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHH
Confidence 3455666666666554444445556676665 56788999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 249 LAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 249 L~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+++|+++|.+|..|+||||+|+.+|+.+
T Consensus 331 l~~gad~n~~~~~g~t~L~~A~~~g~~~ 358 (437)
T 1n11_A 331 LQHQADVNAKTKLGYSPLHQAAQQGHTD 358 (437)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HhcCCCCCCCCCCCCCHHHHHHHCChHH
Confidence 9999999999999999999999999864
No 90
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.37 E-value=2.7e-12 Score=111.83 Aligned_cols=68 Identities=16% Similarity=0.127 Sum_probs=65.3
Q ss_pred HHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 209 DATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALA-AGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 209 ~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~-~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
.+++++|++.|++++.+|..|+||||+|+..|+.++|++|++ .|++++.+|..|+||||+|+.+|+.+
T Consensus 199 ~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~ 267 (285)
T 1wdy_A 199 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK 267 (285)
T ss_dssp HHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHH
Confidence 689999999999999999999999999999999999999999 89999999999999999999998864
No 91
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.36 E-value=1.5e-12 Score=114.00 Aligned_cols=81 Identities=6% Similarity=-0.081 Sum_probs=58.7
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFAC 270 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa 270 (280)
..+.+|.++ ..++.+++++|++.|++++.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+|||++|.
T Consensus 192 g~tpL~~A~-----~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~ 266 (282)
T 1oy3_D 192 GRTPLHLAV-----EAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSG 266 (282)
T ss_dssp CCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-----------
T ss_pred CcCHHHHHH-----HcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccC
Confidence 445666555 668889999999999999999999999999999999999999999999999999999999999998
Q ss_pred HcCCCC
Q 023608 271 GYGEVC 276 (280)
Q Consensus 271 ~~G~~e 276 (280)
.....|
T Consensus 267 ~~~~~~ 272 (282)
T 1oy3_D 267 SDSDSD 272 (282)
T ss_dssp ------
T ss_pred Cccccc
Confidence 765443
No 92
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.36 E-value=1.4e-12 Score=117.09 Aligned_cols=81 Identities=20% Similarity=0.149 Sum_probs=72.6
Q ss_pred cCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 023608 189 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHF 268 (280)
Q Consensus 189 ~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~ 268 (280)
....+.+|.++ ..|+.++++.|++.|++++..| |+||||+||..|+.++|++|+++|++++.+|..|+||||+
T Consensus 29 ~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 29 VHGHSASYYAI-----ADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY 101 (285)
T ss_dssp TTSCCHHHHHH-----HTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHH-----HcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence 44445666655 6788999999999999999984 8999999999999999999999999999999999999999
Q ss_pred HHHcCCCC
Q 023608 269 ACGYGEVC 276 (280)
Q Consensus 269 Aa~~G~~e 276 (280)
||.+|+++
T Consensus 102 A~~~g~~~ 109 (285)
T 3kea_A 102 AVDSGNMQ 109 (285)
T ss_dssp HHHTTCHH
T ss_pred HHHcCCHH
Confidence 99999865
No 93
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.35 E-value=2.1e-12 Score=120.25 Aligned_cols=81 Identities=14% Similarity=0.120 Sum_probs=73.0
Q ss_pred chhHHHHhHHhhhhccCCHHHHHHHHhCC-CCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 023608 191 DKDVLQKLGEAMGLAVGGDATTSADNAGA-DEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g~~~~v~~Ll~~g-advn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~A 269 (280)
..+.+|.++ ..++.++|++|++.+ ++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 279 g~t~Lh~A~-----~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 279 GRTALHYAA-----QVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp CCCTHHHHH-----SSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred CCCHHHHHH-----HhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 344555555 778899999999765 99999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCC
Q 023608 270 CGYGEVC 276 (280)
Q Consensus 270 a~~G~~e 276 (280)
+.+||.+
T Consensus 354 ~~~g~~~ 360 (373)
T 2fo1_E 354 QANNHHN 360 (373)
T ss_dssp HHTTCHH
T ss_pred HHcCCHH
Confidence 9999865
No 94
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.35 E-value=1.5e-12 Score=112.39 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=77.9
Q ss_pred HHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCC------ccccCCCCCcHHHHHHhcCCHHHHHH
Q 023608 174 LDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADE------AEEVGNEDESIVHHTASVGDAEGLKN 247 (280)
Q Consensus 174 ~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gad------vn~~D~~g~TpLh~Aa~~G~~eivk~ 247 (280)
++.+.+.|...-.........++.++ ..++.+++++|++.+++ ++..|..|.||||+||..|+.++|++
T Consensus 61 v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 135 (236)
T 1ikn_D 61 AEALLGAGCDPELRDFRGNTPLHLAC-----EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVEL 135 (236)
T ss_dssp HHCCCSCCCCSCCCCTTCCCHHHHHH-----HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHH
Confidence 33333444333333344455566555 66788999999999876 67889999999999999999999999
Q ss_pred HHHcCCCCCCCCC-CCCcHHHHHHHcCCCC
Q 023608 248 ALAAGADKDEEDS-EGRTALHFACGYGEVC 276 (280)
Q Consensus 248 LL~~GAdvn~~D~-~G~TPLH~Aa~~G~~e 276 (280)
|+++|++++.+|. .|+||||+|+.+|+.+
T Consensus 136 Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 136 LVSLGADVNAQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp HHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred HHHcCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 9999999999998 9999999999998864
No 95
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.34 E-value=1.2e-12 Score=119.88 Aligned_cols=65 Identities=17% Similarity=0.137 Sum_probs=53.7
Q ss_pred HHHHHHHhCCCCccc-cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 023608 210 ATTSADNAGADEAEE-VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE 274 (280)
Q Consensus 210 ~~v~~Ll~~gadvn~-~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~ 274 (280)
+++++|++.|+++|. +|..|+||||+||.+|+.++|++||++|++++.+|..|+||||+||.+|+
T Consensus 111 ~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 111 EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp HHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred HHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 567777888888888 78888888888888888888888888888888888888888888888776
No 96
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.34 E-value=4.6e-12 Score=113.93 Aligned_cols=65 Identities=14% Similarity=0.163 Sum_probs=39.4
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFA 269 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~A 269 (280)
..++.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 256 ~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a 320 (351)
T 3utm_A 256 ERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG 320 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh
Confidence 44555566666666666666666666666666666666666666666666666666666666654
No 97
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.34 E-value=2.9e-12 Score=116.47 Aligned_cols=68 Identities=16% Similarity=0.126 Sum_probs=58.1
Q ss_pred HHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 209 DATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA-GADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 209 ~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~-GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..++++|++.|+++|.+|..|+||||+||..|+.++|++|+.. |++++.+|.+|+||||+||.+|+.+
T Consensus 219 ~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~ 287 (337)
T 4g8k_A 219 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK 287 (337)
T ss_dssp HHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHH
Confidence 3577888888998988888889999999999999999888874 7888888888999999998888764
No 98
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.34 E-value=1.4e-12 Score=119.85 Aligned_cols=81 Identities=14% Similarity=0.058 Sum_probs=73.3
Q ss_pred chhHHHHhHHhhhhccC--CHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC-----CCCCCCCCC
Q 023608 191 DKDVLQKLGEAMGLAVG--GDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGAD-----KDEEDSEGR 263 (280)
Q Consensus 191 d~~~l~~~~~~~g~~~g--~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAd-----vn~~D~~G~ 263 (280)
..+.++.++ ..| +.+++++|++.|++++.+|..|+||||+||..|+.++|++|+++|++ ++.+|..|+
T Consensus 138 g~t~L~~A~-----~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 138 GQTALHWCV-----GLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp CCCHHHHHH-----HSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCHHHHHH-----HcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 345555554 667 78999999999999999999999999999999999999999999999 999999999
Q ss_pred cHHHHHHHcCCCC
Q 023608 264 TALHFACGYGEVC 276 (280)
Q Consensus 264 TPLH~Aa~~G~~e 276 (280)
||||+||.+|+++
T Consensus 213 t~L~~A~~~g~~~ 225 (364)
T 3ljn_A 213 SHLHWAILINWED 225 (364)
T ss_dssp CTTHHHHTTTCHH
T ss_pred cHHHHHHHcCCHH
Confidence 9999999999865
No 99
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.33 E-value=4.3e-12 Score=111.80 Aligned_cols=97 Identities=16% Similarity=0.093 Sum_probs=75.8
Q ss_pred HHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Q 023608 174 LDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA 253 (280)
Q Consensus 174 ~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GA 253 (280)
++.+.+.+...-.......+.++..+ ..++.++++.|++.|++++.. .+|.||||+|+..|+.+++++|+++|+
T Consensus 52 v~~Ll~~g~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 125 (261)
T 2xai_A 52 VKILLKHGAQVNGVTADWHTPLFNAC-----VSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGG 125 (261)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 34444444333223333445555544 667889999999999999864 559999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCCC
Q 023608 254 DKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 254 dvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+++.+|..|+||||+|+.+|+.+
T Consensus 126 ~~~~~~~~g~t~L~~A~~~~~~~ 148 (261)
T 2xai_A 126 NIDHKISHLGTPLYLACENQQRA 148 (261)
T ss_dssp CTTCCBTTTBCHHHHHHHTTCHH
T ss_pred CCCcCCCCCCCHHHHHHHhCCHH
Confidence 99999999999999999998864
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.32 E-value=2.8e-12 Score=120.97 Aligned_cols=72 Identities=19% Similarity=0.208 Sum_probs=68.7
Q ss_pred cc-CCHHHHHHHHhCCCCccccC--CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AV-GGDATTSADNAGADEAEEVG--NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~-g~~~~v~~Ll~~gadvn~~D--~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
.. ++.++++.|++.|+++|..+ ..|+||||+||..|+.++|++||++|+++|.+|..|+||||+|+.+|+++
T Consensus 208 ~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~ 282 (368)
T 3jue_A 208 GHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTG 282 (368)
T ss_dssp SSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHH
Confidence 56 88899999999999999998 89999999999999999999999999999999999999999999999865
No 101
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.29 E-value=3.9e-12 Score=123.36 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=68.1
Q ss_pred ccCCHHHHHHHHhCCCCcccc------CCCCCcHHHHHHh---cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCC
Q 023608 205 AVGGDATTSADNAGADEAEEV------GNEDESIVHHTAS---VGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEV 275 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~------D~~g~TpLh~Aa~---~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~ 275 (280)
..|+.+.++.|++.|+++|.. |..|+||||+||. .|+.++|++||++|+++|.+|..|+||||+||.+||+
T Consensus 141 ~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~ 220 (497)
T 3lvq_E 141 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQP 220 (497)
T ss_dssp HHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCH
T ss_pred hccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCH
Confidence 678899999999999999988 8999999999976 9999999999999999999999999999999999986
Q ss_pred C
Q 023608 276 C 276 (280)
Q Consensus 276 e 276 (280)
+
T Consensus 221 ~ 221 (497)
T 3lvq_E 221 D 221 (497)
T ss_dssp H
T ss_pred H
Confidence 5
No 102
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.28 E-value=1.1e-11 Score=111.07 Aligned_cols=71 Identities=20% Similarity=0.182 Sum_probs=51.4
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
..+..+++++|++.|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 134 ~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 134 VSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 204 (285)
T ss_dssp HHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred HcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 4466677777777777776543 3777777777777777777777777777777777777777777777654
No 103
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.28 E-value=1.7e-12 Score=118.88 Aligned_cols=97 Identities=15% Similarity=-0.019 Sum_probs=78.2
Q ss_pred HHHHcCChhhhh-hhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCC---HHHHHHHHH
Q 023608 175 DEIESGGPSAMM-KYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGD---AEGLKNALA 250 (280)
Q Consensus 175 e~i~~~g~~al~-~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~---~eivk~LL~ 250 (280)
+.+...+...-. ......+.+|.++ ..|+.++|++|++.|++++.+|..|+||||+||.+|+ .++++.|++
T Consensus 114 ~~l~~~g~dvn~~~d~~g~TpLh~Aa-----~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~ 188 (327)
T 1sw6_A 114 DAFPNTQLNLNIPVDEHGNTPLHWLT-----SIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLD 188 (327)
T ss_dssp HHCTTSCCCSCSCCSTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHH
T ss_pred HHHHhcCCCcccccCCCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHH
Confidence 333444444333 3345556676666 6788999999999999999999999999999999998 788888888
Q ss_pred cC-CCCCCCCCCCCcHHHHHHH----cCCCC
Q 023608 251 AG-ADKDEEDSEGRTALHFACG----YGEVC 276 (280)
Q Consensus 251 ~G-Advn~~D~~G~TPLH~Aa~----~G~~e 276 (280)
.+ ++++.+|..|+||||+||. +|+.+
T Consensus 189 ~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~ 219 (327)
T 1sw6_A 189 YLYPCLILEDSMNRTILHHIIITSGMTGCSA 219 (327)
T ss_dssp HHGGGGGEECTTCCCHHHHHHHHHTSTTCHH
T ss_pred hhhccccCCCCCCCCHHHHHHHHccccccHH
Confidence 87 7899999999999999998 66643
No 104
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.28 E-value=1.6e-11 Score=111.59 Aligned_cols=94 Identities=10% Similarity=-0.083 Sum_probs=73.5
Q ss_pred HHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHh-CCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 173 ILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNA-GADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 173 i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~-~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
+++.+.+.|...-.+.....+.+|..+ ..+..+.++.|+. .|+++|.+|.+|+||||+||.+|+.++|++||++
T Consensus 221 i~~lLl~~gad~n~~d~~g~t~L~~a~-----~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 295 (337)
T 4g8k_A 221 ITHLLLDHGADVNVRGERGKTPLILAV-----EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 295 (337)
T ss_dssp HHHHHHHTTCCTTCCCGGGCCHHHHHH-----HTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHH-----HhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 344444444443333333445565555 6788899999987 5899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 252 GADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 252 GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
|+++|.+ ||||+|+..|+.+
T Consensus 296 GAd~n~~-----~~L~~A~~~~~~~ 315 (337)
T 4g8k_A 296 GASTDCG-----DLVMTARRNYDHS 315 (337)
T ss_dssp SCSSTTC-----CHHHHHHHTTCHH
T ss_pred CCCCCCC-----CHHHHHHHcCCHH
Confidence 9999864 6999999999864
No 105
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.26 E-value=2.5e-11 Score=103.26 Aligned_cols=71 Identities=21% Similarity=0.173 Sum_probs=65.7
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEV 275 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~ 275 (280)
..++.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+++.
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHS 155 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCh
Confidence 56788999999999999999999999999999999999999999999999999999999999999977763
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.25 E-value=1.6e-11 Score=110.72 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=66.6
Q ss_pred hccCCHHHHHHHHhCCCCc------cccCCCCCcHHHHHHhc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 023608 204 LAVGGDATTSADNAGADEA------EEVGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE 274 (280)
Q Consensus 204 ~~~g~~~~v~~Ll~~gadv------n~~D~~g~TpLh~Aa~~---G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~ 274 (280)
+..++.+.+..+++.|.++ +..|..|+||||+||.. |+.++|++|+++|+++|.+|..|+||||+|+.+|+
T Consensus 138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC
Confidence 3667888899999999994 45589999999999999 99999999999999999999999999999999998
Q ss_pred CC
Q 023608 275 VC 276 (280)
Q Consensus 275 ~e 276 (280)
.+
T Consensus 218 ~~ 219 (278)
T 1dcq_A 218 AE 219 (278)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 107
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.24 E-value=3.7e-11 Score=102.15 Aligned_cols=72 Identities=15% Similarity=0.125 Sum_probs=65.7
Q ss_pred ccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCC-HHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCCCC
Q 023608 205 AVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGD-AEGLKNALAAGADKDEEDS-EGRTALHFACGYGEVC 276 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~-~eivk~LL~~GAdvn~~D~-~G~TPLH~Aa~~G~~e 276 (280)
..++.+++++|++.|++++.+|..|.||||+|+..++ .+++++|++.|++++..+. .|+||||+|+.+|+++
T Consensus 118 ~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 191 (240)
T 3eu9_A 118 QFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTT 191 (240)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHH
T ss_pred HcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHH
Confidence 6678899999999999999999999999999997776 8999999999999999987 8999999999998865
No 108
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.24 E-value=6.1e-12 Score=117.04 Aligned_cols=62 Identities=16% Similarity=0.153 Sum_probs=44.5
Q ss_pred HHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 215 DNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 215 Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
|++.|+++|.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+.+|+++
T Consensus 152 ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~ 213 (373)
T 2fo1_E 152 CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 213 (373)
T ss_dssp HHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHH
T ss_pred HHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHH
Confidence 34677777777777777777777777777777777777777777777777777777766643
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.24 E-value=1.4e-11 Score=112.46 Aligned_cols=72 Identities=18% Similarity=0.234 Sum_probs=67.7
Q ss_pred ccCCHHHHHHHHhCCCCccc------cCCCCCcHHHHHHhc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCC
Q 023608 205 AVGGDATTSADNAGADEAEE------VGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEV 275 (280)
Q Consensus 205 ~~g~~~~v~~Ll~~gadvn~------~D~~g~TpLh~Aa~~---G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~ 275 (280)
..++.+.++.|++.|++++. .|..|+||||+||.. |++++|++||++|+++|.+|..|+||||+|+.+|+.
T Consensus 160 ~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~ 239 (301)
T 2b0o_E 160 CNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQP 239 (301)
T ss_dssp HTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 67888899999999999998 699999999999997 899999999999999999999999999999999986
Q ss_pred C
Q 023608 276 C 276 (280)
Q Consensus 276 e 276 (280)
+
T Consensus 240 ~ 240 (301)
T 2b0o_E 240 D 240 (301)
T ss_dssp H
T ss_pred H
Confidence 5
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.17 E-value=2.4e-11 Score=93.54 Aligned_cols=88 Identities=15% Similarity=0.091 Sum_probs=68.6
Q ss_pred HHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Q 023608 174 LDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA 253 (280)
Q Consensus 174 ~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GA 253 (280)
++.+.+.+...-.........+|.++ ..+..+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 25 ~~~Ll~~g~~~~~~d~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 99 (115)
T 2l6b_A 25 VKKLLSKGADVNARSKDGNTPLHLAA-----KNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGA 99 (115)
T ss_dssp HHHHTTTTCCSSCCCSSSCCTTHHHH-----TTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSS
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHH-----HcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 34444444433333334445555555 6788899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcHH
Q 023608 254 DKDEEDSEGRTAL 266 (280)
Q Consensus 254 dvn~~D~~G~TPL 266 (280)
++|.++..|+||-
T Consensus 100 ~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 100 DVNARSWGSSHHH 112 (115)
T ss_dssp SHHHHSCCCC---
T ss_pred CCCcCCccccccc
Confidence 9999999999984
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.05 E-value=8.5e-10 Score=81.98 Aligned_cols=78 Identities=18% Similarity=0.138 Sum_probs=61.8
Q ss_pred HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHHHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 023608 172 PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA 251 (280)
Q Consensus 172 ~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~~ 251 (280)
++++.+.+.+...-.......+.+|..+ ..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 16 ~~v~~Ll~~g~~~n~~d~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 16 EVVKLLLEAGADVNAKDKNGRTPLHLAA-----RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 90 (93)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3444455555444333344556666655 66888999999999999999999999999999999999999999999
Q ss_pred CCC
Q 023608 252 GAD 254 (280)
Q Consensus 252 GAd 254 (280)
|++
T Consensus 91 ga~ 93 (93)
T 1n0q_A 91 GAY 93 (93)
T ss_dssp TCC
T ss_pred CCC
Confidence 985
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.02 E-value=1.5e-10 Score=89.19 Aligned_cols=55 Identities=25% Similarity=0.425 Sum_probs=48.1
Q ss_pred ccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCCC
Q 023608 222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVC 276 (280)
Q Consensus 222 vn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~~D~~G~TPLH~Aa~~G~~e 276 (280)
+...|.+|.|+||+||..|+.+++++|+++|++++.+|..|+||||+||.+|+++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~ 71 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLE 71 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 4556788999999999999999999999999999999999999999999998764
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.99 E-value=4e-11 Score=113.27 Aligned_cols=75 Identities=15% Similarity=0.045 Sum_probs=63.9
Q ss_pred hhhhccCCHHHHHHHHhCCCC---ccccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC--CCCCCCcHHHHHH-HcCC
Q 023608 201 AMGLAVGGDATTSADNAGADE---AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDE--EDSEGRTALHFAC-GYGE 274 (280)
Q Consensus 201 ~~g~~~g~~~~v~~Ll~~gad---vn~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAdvn~--~D~~G~TPLH~Aa-~~G~ 274 (280)
.+.+..|+.++|++|++.|++ ++..+.+ .||||+||..|+.++|++|+++|++++. +|..|+||||+|| .+||
T Consensus 133 ~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~ 211 (376)
T 2aja_A 133 RLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 211 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCC
Confidence 333478999999999999976 2333333 9999999999999999999999999887 8899999999999 9998
Q ss_pred CC
Q 023608 275 VC 276 (280)
Q Consensus 275 ~e 276 (280)
++
T Consensus 212 ~e 213 (376)
T 2aja_A 212 HN 213 (376)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.77 E-value=1.1e-09 Score=103.33 Aligned_cols=78 Identities=10% Similarity=0.022 Sum_probs=59.7
Q ss_pred hHHHHhHHhhhhccCCHHHHHHHHhCCCCc---cccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC---CCCCCCCCCcHH
Q 023608 193 DVLQKLGEAMGLAVGGDATTSADNAGADEA---EEVGNEDESIVHHTASVGDAEGLKNALAAGAD---KDEEDSEGRTAL 266 (280)
Q Consensus 193 ~~l~~~~~~~g~~~g~~~~v~~Ll~~gadv---n~~D~~g~TpLh~Aa~~G~~eivk~LL~~GAd---vn~~D~~G~TPL 266 (280)
+.++..+ ..|+.++|++|++.|+.. +..+..+.||||+||.+|+.++|++|+++|++ ++..+.+ +|||
T Consensus 94 T~Lh~Aa-----~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 94 VICFVAA-----ITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp HHHHHHH-----HHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CHHHHHH-----HcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 4455554 778999999999999832 34455678999999999999999999999986 2333333 9999
Q ss_pred HHHHHcCCCC
Q 023608 267 HFACGYGEVC 276 (280)
Q Consensus 267 H~Aa~~G~~e 276 (280)
|+||.+||++
T Consensus 168 h~Aa~~G~~e 177 (376)
T 2aja_A 168 RLAAENGHLH 177 (376)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHCCCHH
Confidence 9999999975
No 115
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=98.03 E-value=2.8e-06 Score=61.96 Aligned_cols=54 Identities=24% Similarity=0.422 Sum_probs=38.4
Q ss_pred HHHHHHhhCChHHHHHHHHHhcCChHHHHHHHHHHhhccCCcCCCCCCCChhHHHHHHHHhccChHHHHHHHHHHh
Q 023608 58 FSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGN 133 (280)
Q Consensus 58 ~~~~~~~~~~p~~~~~~~~~~~~p~~~~ma~~~~~~~~~~~~~~~~p~~~~~~~~~~m~~~m~np~~~~ma~~~~~ 133 (280)
.+.+..+|+||.|.. +|+||.|+++.+++.+-- ..|+++|+||.++.++++|+.
T Consensus 10 ee~~~~~m~dPEi~~----im~DP~~~~~lq~~~~NP------------------~~~~k~~~nP~v~~~i~kl~~ 63 (71)
T 2llw_A 10 EETYQRAMKDPEVAA----IMQDPVMQSILQQAQQNP------------------AALQEHMKNPEVFKKIQTLIA 63 (71)
T ss_dssp HHHHHHHHHSHHHHH----HHTCTHHHHHHHHHHHCH------------------HHHHHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHH----HhCCHHHHHHHHHHHHCH------------------HHHHHHHhCHHHHHHHHHHHH
Confidence 444556777775544 667777777777766521 568889999999999999864
No 116
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=97.92 E-value=9.3e-06 Score=57.53 Aligned_cols=52 Identities=8% Similarity=0.261 Sum_probs=32.6
Q ss_pred HHHhhCChHHHHHHHHHhcCChHHHHHHHHHHhhccCCcCCCCCCCChhHHHHHHHHhccChHHHHHHHHHHhh
Q 023608 61 MSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNA 134 (280)
Q Consensus 61 ~~~~~~~p~~~~~~~~~~~~p~~~~ma~~~~~~~~~~~~~~~~p~~~~~~~~~~m~~~m~np~~~~ma~~~~~~ 134 (280)
++.|++||.+.. +++||.|+++.+++++.- ..+++.|+||.++++.+.|...
T Consensus 5 ~~kl~~dPe~~~----~m~dP~~~~~lq~i~~NP------------------~~~~~~~~dP~v~~~~~~L~~~ 56 (62)
T 2lnm_A 5 ISKIMENPDVAM----AFQNPRVQAALMECSENP------------------MNIMKYQNDKEVMDVFNKISQL 56 (62)
T ss_dssp HHHHTTSHHHHH----HTTSHHHHHHHHHHTTCG------------------GGHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcChHHHH----HcCCHHHHHHHHHHHHCH------------------HHHHHHHhChHHHHHHHHHHHH
Confidence 445666664433 556666655555554411 3577789999999988887643
No 117
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=97.25 E-value=0.0002 Score=50.58 Aligned_cols=46 Identities=17% Similarity=0.171 Sum_probs=38.0
Q ss_pred CCCCCCChhcHHHHHHhhCChHHHHHHHHHhcCChHHHHHHHHHHhhcc
Q 023608 48 VGGAAPNPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHG 96 (280)
Q Consensus 48 ~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~ma~~~~~~~~~ 96 (280)
+..++.||.++++++.+.+||+ .+++.++||.++++.+.|-+-++|
T Consensus 14 ~~~~m~dP~~~~~lq~i~~NP~---~~~~~~~dP~v~~~~~~L~~~~~g 59 (62)
T 2lnm_A 14 VAMAFQNPRVQAALMECSENPM---NIMKYQNDKEVMDVFNKISQLFPG 59 (62)
T ss_dssp HHHHTTSHHHHHHHHHHTTCGG---GHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHcCCHHHHHHHHHHHHCHH---HHHHHHhChHHHHHHHHHHHHhCC
Confidence 3456889999999999999995 445799999999999999877654
No 118
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=97.24 E-value=4.1e-05 Score=55.74 Aligned_cols=45 Identities=18% Similarity=0.260 Sum_probs=37.3
Q ss_pred CCCCCCCCChhcHHHHHHhhCChHHHHHHHHHhcCChHHHHHHHHHHh
Q 023608 46 PGVGGAAPNPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKT 93 (280)
Q Consensus 46 ~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~ma~~~~~~ 93 (280)
|.+..++.||.+++++++|++|| ..++..|+||.|+++.++|...
T Consensus 20 PEi~~im~DP~~~~~lq~~~~NP---~~~~k~~~nP~v~~~i~kl~~a 64 (71)
T 2llw_A 20 PEVAAIMQDPVMQSILQQAQQNP---AALQEHMKNPEVFKKIQTLIAA 64 (71)
T ss_dssp HHHHHHHTCTHHHHHHHHHHHCH---HHHHHHHHSHHHHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHHHHCH---HHHHHHHhCHHHHHHHHHHHHc
Confidence 34456788999999999999999 5566899999999999999763
No 119
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=96.68 E-value=0.0007 Score=49.04 Aligned_cols=51 Identities=22% Similarity=0.400 Sum_probs=35.2
Q ss_pred HHHHhhCChHHHHHHHHHhcCChHHHHHHHHHHhhccCCcCCCCCCCChhHHHHHHHH-hccChHHHHHHHHHH
Q 023608 60 AMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQ-VMQNPQFMTMAERLG 132 (280)
Q Consensus 60 ~~~~~~~~p~~~~~~~~~~~~p~~~~ma~~~~~~~~~~~~~~~~p~~~~~~~~~~m~~-~m~np~~~~ma~~~~ 132 (280)
..+.|++||.++. +++||.|+++-+++++.- ..+++ .++||.+++....|+
T Consensus 15 ~~~kl~~dP~t~~----~~~DP~~~~~lq~i~~NP------------------~~i~~~~~~dPrv~~~l~~L~ 66 (71)
T 2llv_A 15 LIENLKKNPKTSE----MMKDPQLVAKLIGYKQNP------------------QAIGQDLFTDPRLMTIMATLM 66 (71)
T ss_dssp CHHHHHHSSTTHH----HHHSCTHHHHHHHHHHSC------------------TTHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHcChHHHH----HhcCHHHHHHHHHHHHCH------------------HHHHHHHhhCcHHHHHHHHHH
Confidence 3346777886665 667887777777776632 34667 888999888777664
No 120
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=92.99 E-value=0.03 Score=40.26 Aligned_cols=17 Identities=41% Similarity=0.768 Sum_probs=11.1
Q ss_pred hhCChHHHHHHHHHhcCChH
Q 023608 64 LLNDPSIKELAEQIAKDPAF 83 (280)
Q Consensus 64 ~~~~p~~~~~~~~~~~~p~~ 83 (280)
+.++| ++.+.|++||..
T Consensus 9 ~f~~p---~~~~kl~~dP~t 25 (71)
T 2llv_A 9 LFADP---NLIENLKKNPKT 25 (71)
T ss_dssp HHHSS---SCHHHHHHSSTT
T ss_pred hccCh---HHHHHHHcChHH
Confidence 55577 555568888844
No 121
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=91.81 E-value=0.15 Score=42.93 Aligned_cols=30 Identities=10% Similarity=0.273 Sum_probs=14.6
Q ss_pred Hhh-CChHHHHHHHHHhcCCh-HHHHHHHHHH
Q 023608 63 GLL-NDPSIKELAEQIAKDPA-FNSMAEQLQK 92 (280)
Q Consensus 63 ~~~-~~p~~~~~~~~~~~~p~-~~~ma~~~~~ 92 (280)
.|+ ++|.|.+|-+.|.+||+ +..|-+||+.
T Consensus 27 ~L~~~~Pqf~qlRq~vqqNPqlL~~lLqqig~ 58 (171)
T 2qsf_X 27 SIGLTVEDLLSLRQVVSGNPEALAPLLENISA 58 (171)
T ss_dssp -CCCCHHHHHHHHHHHHTCGGGHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHCHHHHHHHHHHHHh
Confidence 344 55555555555555554 3334444443
No 122
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=86.77 E-value=0.68 Score=38.82 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=28.7
Q ss_pred CCCCC-CChhcHHHHHHhhCChHHH-HHHHHHh-cCChHHHHHHH
Q 023608 48 VGGAA-PNPFDFSAMSGLLNDPSIK-ELAEQIA-KDPAFNSMAEQ 89 (280)
Q Consensus 48 ~~~~~-~~p~~~~~~~~~~~~p~~~-~~~~~~~-~~p~~~~ma~~ 89 (280)
+..|. ++|++.++-+-+.+||++. .+.+||- +||++.++-.+
T Consensus 25 l~~L~~~~Pqf~qlRq~vqqNPqlL~~lLqqig~~NPqL~qlI~q 69 (171)
T 2qsf_X 25 PGSIGLTVEDLLSLRQVVSGNPEALAPLLENISARYPQLREHIMA 69 (171)
T ss_dssp ---CCCCHHHHHHHHHHHHTCGGGHHHHHHHHHHHCTTHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHCHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 77788 9999888888899999744 3444444 59977766544
No 123
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=84.26 E-value=0.89 Score=32.76 Aligned_cols=30 Identities=20% Similarity=0.492 Sum_probs=20.1
Q ss_pred HhhCChHHHHHHHHHhcCChH-HHHHHHHHH
Q 023608 63 GLLNDPSIKELAEQIAKDPAF-NSMAEQLQK 92 (280)
Q Consensus 63 ~~~~~p~~~~~~~~~~~~p~~-~~ma~~~~~ 92 (280)
-|.++|.|.+|-+-+.+||++ ..+-++|+.
T Consensus 8 ~Lr~~Pqf~qlR~~vqqNP~lL~~lLqqL~~ 38 (72)
T 1pve_A 8 FLRNQPQFQQMRQIIQQNPSLLPALLQQIGR 38 (72)
T ss_dssp GGTTCTTTTTHHHHHTTCGGGHHHHHHHHHT
T ss_pred HHHcChHHHHHHHHHHHCHHHHHHHHHHHHh
Confidence 477788877777778888843 335555544
No 124
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=77.14 E-value=5.1 Score=27.75 Aligned_cols=31 Identities=19% Similarity=0.478 Sum_probs=23.8
Q ss_pred HHhhCChHHHHHHHHHhcCChH-HHHHHHHHH
Q 023608 62 SGLLNDPSIKELAEQIAKDPAF-NSMAEQLQK 92 (280)
Q Consensus 62 ~~~~~~p~~~~~~~~~~~~p~~-~~ma~~~~~ 92 (280)
.-|.++|.|.+|-+-+.+||+. ..+-++++.
T Consensus 5 ~~Lr~~Pqf~~lR~~vq~NP~~L~~lLqql~~ 36 (61)
T 2f4m_B 5 EFLRNQPQFQQMRQIIQQNPSLLPALLQQIGR 36 (61)
T ss_dssp GGGTTCHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHcChHHHHHHHHHHHCHHHHHHHHHHHHh
Confidence 3578899999999889999954 446667665
No 125
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=73.38 E-value=2.1 Score=32.68 Aligned_cols=50 Identities=20% Similarity=0.395 Sum_probs=39.0
Q ss_pred HHHhccChHHHHHHHHHHhhhcCCchhhHhHhhhcCcChHHHHHHHHHHh
Q 023608 115 MQQVMQNPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQIEERMAKI 164 (280)
Q Consensus 115 m~~~m~np~~~~ma~~~~~~lm~dP~l~~ml~~l~n~~~~~~~~~~l~~l 164 (280)
|.++|+++.|..-.+.+.+.++.||.++..++.-.+.-....++.-+.+|
T Consensus 8 l~~~~~~~~~~~~~~~~~~~vl~dP~V~~Fl~~h~~~l~~~~I~~s~~kL 57 (106)
T 2k7r_A 8 LQGVTGRPDFQKRLEQMKEKVMKDQDVQAFLKENEEVIDQKMIEKSLNKL 57 (106)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHTTCHHHHHHHHHSTTTCCHHHHHHTHHHH
T ss_pred HHHHHhcccHHHHHHHHHHHHHcCHHHHHHHHHChhhCCHHHHHhhHHHH
Confidence 44578999999998999999999999999888776555556666555444
No 126
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=47.64 E-value=7.2 Score=23.72 Aligned_cols=15 Identities=33% Similarity=0.443 Sum_probs=7.2
Q ss_pred hhCChHHHHHHHHHh
Q 023608 64 LLNDPSIKELAEQIA 78 (280)
Q Consensus 64 ~~~~p~~~~~~~~~~ 78 (280)
+++||++|+++++|.
T Consensus 3 ~~~Dp~~K~l~~cL~ 17 (34)
T 3pk1_B 3 VPQDASTKKLSECLK 17 (34)
T ss_dssp ----CTHHHHHHHHH
T ss_pred CCCCccHHHHHHHHH
Confidence 456677777666653
No 127
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=38.00 E-value=93 Score=25.52 Aligned_cols=96 Identities=16% Similarity=0.195 Sum_probs=48.5
Q ss_pred CchhhHhHhhhcCc--ChHHHHHHHHHHhhcCCCh-H-HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHHH
Q 023608 138 DPSMSHMMESLTNP--TKKDQIEERMAKIKEDPSL-K-PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTS 213 (280)
Q Consensus 138 dP~l~~ml~~l~n~--~~~~~~~~~l~~lk~dp~~-~-~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v~ 213 (280)
+|.++..+...... .+-..+++.+..+..+|.- + +..+-+...+...+.. ..+..++.......+..+-+.++..
T Consensus 44 ~p~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~~~~~~c~am~gli~e~~~~~~~-~~~~~v~da~li~aaq~~EhyEIA~ 122 (173)
T 2gyq_A 44 NRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNCPAIDGLIKEADETAGE-IADKTVLDAAIVANAQAVEHYEIAR 122 (173)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCCCHHHHHHHHHHHHHHHT-BCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777666544332 4556677888888877653 3 4444444444333333 3344443222111111111222222
Q ss_pred HHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 023608 214 ADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNAL 249 (280)
Q Consensus 214 ~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL 249 (280)
+ .|.+-||-..|+.+++.+|-
T Consensus 123 Y---------------gtL~a~A~~lG~~e~~~lL~ 143 (173)
T 2gyq_A 123 Y---------------GTLIAWAEELGHDDIVRFLT 143 (173)
T ss_dssp H---------------HHHHHHHHHTTCHHHHHHHH
T ss_pred H---------------HHHHHHHHHcCCHHHHHHHH
Confidence 2 45566777778777776654
No 128
>3hiu_A Uncharacterized protein; APC40011, XCC3681, xanthomonas campestris PV. campestris STR. ATCC 33913, structural genomics, PSI-2; HET: MSE; 1.85A {Xanthomonas campestris PV}
Probab=37.13 E-value=88 Score=25.58 Aligned_cols=49 Identities=8% Similarity=0.146 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhhcCCchhhHhHhhhc--CcChHHHHHHHHHHhhcCCChHH
Q 023608 124 FMTMAERLGNALMQDPSMSHMMESLT--NPTKKDQIEERMAKIKEDPSLKP 172 (280)
Q Consensus 124 ~~~ma~~~~~~lm~dP~l~~ml~~l~--n~~~~~~~~~~l~~lk~dp~~~~ 172 (280)
+..+...+...+-.+|.++..+..=- .-++...+++++..+...|.-..
T Consensus 21 ~~~aL~~ma~~~a~~peLk~a~e~Hl~eT~~qi~rLe~vf~~lg~~~~~~k 71 (166)
T 3hiu_A 21 AETMMAAMASRIEHYPELKRRIEQHVEETQQQSAGVQRCLELLNGSIPTAK 71 (166)
T ss_dssp HHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCc
Confidence 33444444555667788777664332 33555667788888888777443
No 129
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=31.90 E-value=61 Score=29.96 Aligned_cols=44 Identities=18% Similarity=0.431 Sum_probs=26.9
Q ss_pred HhccChHHHHHHHHHHhhhcCCchh-hHhHhhhcCcChHHHHHHHHHHhhcCCC
Q 023608 117 QVMQNPQFMTMAERLGNALMQDPSM-SHMMESLTNPTKKDQIEERMAKIKEDPS 169 (280)
Q Consensus 117 ~~m~np~~~~ma~~~~~~lm~dP~l-~~ml~~l~n~~~~~~~~~~l~~lk~dp~ 169 (280)
-|.++|+|.+| .+-+-+||++ ..++..+....+ +.+..|.++++
T Consensus 239 ~Lr~~pqf~~l----R~~vq~nP~~l~~~lq~l~~~nP-----~l~~~I~~n~~ 283 (368)
T 1oqy_A 239 FLRDQPQFQNM----RQVIQQNPALLPALLQQLGQENP-----QLLQQISRHQE 283 (368)
T ss_dssp HHHHSHHHHHH----HHSTTTCTTHHHHHHTTTTTTCH-----HHHHHHHHHHH
T ss_pred HHhcChHHHHH----HHHHHhChHHHHHHHHHHHhhCH-----HHHHHHHHCHH
Confidence 47788988755 5667778885 456666654442 44445555443
No 130
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=28.68 E-value=19 Score=33.41 Aligned_cols=19 Identities=26% Similarity=0.632 Sum_probs=13.6
Q ss_pred hhCChHHHHHHHHHhcCCh
Q 023608 64 LLNDPSIKELAEQIAKDPA 82 (280)
Q Consensus 64 ~~~~p~~~~~~~~~~~~p~ 82 (280)
|-++|.|.+|=+-+.+||+
T Consensus 240 Lr~~pqf~~lR~~vq~nP~ 258 (368)
T 1oqy_A 240 LRDQPQFQNMRQVIQQNPA 258 (368)
T ss_dssp HHHSHHHHHHHHSTTTCTT
T ss_pred HhcChHHHHHHHHHHhChH
Confidence 5567777777777777774
No 131
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=28.18 E-value=1.3e+02 Score=24.40 Aligned_cols=97 Identities=9% Similarity=0.049 Sum_probs=48.8
Q ss_pred CchhhHhHhhhcCc--ChHHHHHHHHHH-hhcCCCh-H-HHHHHHHcCChhhhhhhcCchhHHHHhHHhhhhccCCHHHH
Q 023608 138 DPSMSHMMESLTNP--TKKDQIEERMAK-IKEDPSL-K-PILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATT 212 (280)
Q Consensus 138 dP~l~~ml~~l~n~--~~~~~~~~~l~~-lk~dp~~-~-~i~e~i~~~g~~al~~~~~d~~~l~~~~~~~g~~~g~~~~v 212 (280)
+|.++..+...... ++-..+++.+.. +..+|.- + +..+-+...+...+.. ..+.+++.......+..+-+.++.
T Consensus 37 ~p~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg~~~~~~~c~am~gli~e~~~~~~~-~~~~~vlda~li~aaq~~EhyEIA 115 (166)
T 2gs4_A 37 NEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLIEEANEVIES-TEKNEVRDAALIAAAQKVEHYEIA 115 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCCCCHHHHHHHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHH
Confidence 47777666544332 455567788888 8877653 3 4444444444333333 344444322211111111122222
Q ss_pred HHHHhCCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 023608 213 SADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALA 250 (280)
Q Consensus 213 ~~Ll~~gadvn~~D~~g~TpLh~Aa~~G~~eivk~LL~ 250 (280)
.+ .|.+-||-..|+.+++.+|-.
T Consensus 116 ~Y---------------gtL~a~A~~lG~~~~~~lL~~ 138 (166)
T 2gs4_A 116 SY---------------GTLATLAEQLGYRKAAKLLKE 138 (166)
T ss_dssp HH---------------HHHHHHHHHTTCHHHHHHHHH
T ss_pred HH---------------HHHHHHHHHcCCHHHHHHHHH
Confidence 21 455667777788877776643
No 132
>3ogh_B Protein YCIE; iron-binding, MCSG, four-helix-bundle, structural genomics, protein structure initiative; HET: MSE; 1.65A {Escherichia coli O6}
Probab=28.17 E-value=1e+02 Score=25.29 Aligned_cols=49 Identities=14% Similarity=0.142 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhhcCCchhhHhHhhhc--CcChHHHHHHHHHHhhcCCChHH
Q 023608 124 FMTMAERLGNALMQDPSMSHMMESLT--NPTKKDQIEERMAKIKEDPSLKP 172 (280)
Q Consensus 124 ~~~ma~~~~~~lm~dP~l~~ml~~l~--n~~~~~~~~~~l~~lk~dp~~~~ 172 (280)
+..+...+...+-.+|.++..+..=- .-++...+++++..+...|.-..
T Consensus 24 ~~~aL~~ma~~~a~~peLk~a~e~Hl~eT~~qi~rLe~vf~~lg~~~~~~k 74 (171)
T 3ogh_B 24 AESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIK 74 (171)
T ss_dssp HHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccch
Confidence 34444455555667788877665332 33555667788888888888655
No 133
>1s69_A Cyanoglobin, hemoglobin, HB; on 2 helical fold, heme, iron, cyanoba oxygen binding, hexacoordinate, truncated, oxygen storage-T complex; HET: FLC HEM; 1.68A {Synechocystis SP} SCOP: a.1.1.1 PDB: 1s6a_A* 1mwb_A* 1rtx_A* 2hz1_A* 2hz3_A* 2hz2_A*
Probab=27.36 E-value=57 Score=24.57 Aligned_cols=27 Identities=11% Similarity=0.282 Sum_probs=23.6
Q ss_pred ChHHHHHHHHHHhhhcCCchhhHhHhh
Q 023608 121 NPQFMTMAERLGNALMQDPSMSHMMES 147 (280)
Q Consensus 121 np~~~~ma~~~~~~lm~dP~l~~ml~~ 147 (280)
.+.+..+.+.|++.+..||.+..++..
T Consensus 11 ~~~i~~lv~~FY~~v~~dp~l~~~F~~ 37 (124)
T 1s69_A 11 TTAVDLAVDKFYERVLQDDRIKHFFAD 37 (124)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTGGGGTT
T ss_pred hHHHHHHHHHHHHHHHcChHHHHHhCC
Confidence 467899999999999999999988764
No 134
>1dlw_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.54A {Paramecium caudatum} SCOP: a.1.1.1 PDB: 1uvy_A*
Probab=22.84 E-value=68 Score=23.83 Aligned_cols=26 Identities=4% Similarity=0.206 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHhhhcCCchhhHhHhh
Q 023608 122 PQFMTMAERLGNALMQDPSMSHMMES 147 (280)
Q Consensus 122 p~~~~ma~~~~~~lm~dP~l~~ml~~ 147 (280)
+.++.+.+.|++.+..||.+..++..
T Consensus 10 ~~i~~lv~~FY~~v~~dp~l~~~F~~ 35 (116)
T 1dlw_A 10 AAVQAVTAQFYANIQADATVATFFNG 35 (116)
T ss_dssp HHHHHHHHHHHHHHHTCTTTGGGGTT
T ss_pred HHHHHHHHHHHHHHHcCHHHHHhcCC
Confidence 57889999999999999999988763
No 135
>3aq9_A Group 1 truncated hemoglobin; 2/2 fold hemoglobin, nitric oxide detoxification, oxygen BIN; HET: HEM; 1.74A {Tetrahymena pyriformis} PDB: 3aq5_A* 3aq6_A* 3aq8_A* 3aq7_A*
Probab=22.55 E-value=75 Score=23.82 Aligned_cols=27 Identities=7% Similarity=0.213 Sum_probs=23.6
Q ss_pred ChHHHHHHHHHHhhhcCCchhhHhHhh
Q 023608 121 NPQFMTMAERLGNALMQDPSMSHMMES 147 (280)
Q Consensus 121 np~~~~ma~~~~~~lm~dP~l~~ml~~ 147 (280)
.+.++.+.+.|++.+..||.+..++..
T Consensus 14 ~~~i~~lv~~FY~~v~~dp~l~~~F~~ 40 (121)
T 3aq9_A 14 ENAMKAAVPLFYKKVLADERVKHFFKN 40 (121)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTGGGGTT
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHhhCC
Confidence 468999999999999999999988753
No 136
>4g3o_A E3 ubiquitin-protein ligase AMFR; all-helical structure, BAG6; 1.60A {Homo sapiens}
Probab=21.28 E-value=91 Score=21.19 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=23.9
Q ss_pred HHHhcCChHHHHHHHHHHhhccCCcCCCCCCCChhHHHHHHH
Q 023608 75 EQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQ 116 (280)
Q Consensus 75 ~~~~~~p~~~~ma~~~~~~~~~~~~~~~~p~~~~~~~~~~m~ 116 (280)
|.|+=++++..|+++++..+ |+++..+....++
T Consensus 9 ~~~~~~sql~~Mve~V~~mF---------Pqv~~~~I~~DL~ 41 (58)
T 4g3o_A 9 ENLYFQGQLNAMAHQIQEMF---------PQVPYHLVLQDLQ 41 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---------TTSCHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHc---------CCCCHHHHHHHHH
Confidence 45666788899999999875 6777655555443
Done!