Citrus Sinensis ID: 023613

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHcccccEEEEcccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHcccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccEEEEEccHHHccEcccEHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccEccHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHHccccccEEEEcccEEEEccccEEcc
Coil and Loop (DISEMBL)
msnsnstdsspaVQRLVGRVALItggatgigESTVRLFHKHGAKVCIADVqdnlgqqvcqslggepdtffchcdvtkeedvcSAVDLTVEKFGTLDIMvnnagisgapcpdireadLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVagaigglgphaytgskhavLGLNKNVAAELGKygirvncvSPYAVATGLalahlpeeertedAMVGFRNFVARnanmqgteltANDVANAVLFLASDEaryisgtnlmvdggftsVNHSLRVFR
Flexible Loop (DISEMBL)
msnsnstdsspaVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Low Complexity Region (SEG)
MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Disordered region (IsUnstruct)
*************QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNH******
Disordered Region (DISOPRED)
******************RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP*************NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVF*
Disordered Region (DISEMBL)
************VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Disordered Region (DISPRO)
***********AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
Q9C826	285	Xanthoxin dehydrogenase O	yes	no	0.953	0.936	0.722	1e-109
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.95	0.996	0.650	1e-101
Q7FAE1	274	Momilactone A synthase OS	no	no	0.960	0.981	0.501	2e-64
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.946	0.874	0.496	2e-63
O80713	257	Short-chain dehydrogenase	no	no	0.892	0.972	0.480	6e-60
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.9	0.845	0.475	1e-58
P50160	336	Sex determination protein	N/A	no	0.939	0.782	0.449	2e-58
F4J300	259	Short-chain dehydrogenase	no	no	0.896	0.969	0.471	5e-58
Q94K41	257	Short-chain dehydrogenase	no	no	0.885	0.964	0.467	2e-57
O80714	258	Short-chain dehydrogenase	no	no	0.896	0.972	0.454	6e-54

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  395 bits (1016), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/270 (72%), Positives = 229/270 (84%), Gaps = 3/270 (1%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDT-FF 70
           QRL+G+VALITGGATGIGES VRLFHKHGAKVCI D+QD+LG +VC+SL  G   +T FF
Sbjct: 16  QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFF 75

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
            H DV  E+D+ +AVD  V+ FGTLDI++NNAG+ GAPCPDIR   LSEFE  FD+NVKG
Sbjct: 76  IHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKG 135

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F  MKHAAR+MIP+ KG+I+S+CSV G +GG+GPH+Y GSKHAVLGL ++VAAELG++G
Sbjct: 136 AFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHG 195

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVNCVSPYAVAT LALAHLPEEERTEDA VGFRNF A NAN++G ELT +DVANAVLFL
Sbjct: 196 IRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFL 255

Query: 251 ASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           ASD++RYISG NLM+DGGFT  NHS +VFR
Sbjct: 256 ASDDSRYISGDNLMIDGGFTCTNHSFKVFR 285

Involved in the biosynthesis of abscisic acid.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 8EC: 8

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  368 bits (945), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 173/266 (65%), Positives = 215/266 (80%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL+TGGA+GIGES  RLF +HGAK+CI DVQD LGQQV Q LGG+P   + HCD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E+DV  AVD T EK+GT+DIMVNNAGI+G    DIR+AD +EF+KVFDINV GVF G
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLG 121

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           MKHAARIMIP+ KG+I+S+ SV+  I G GPH YTG+KHAV+GL K+VAAELG++GIRVN
Sbjct: 122 MKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVN 181

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           CVSPYAV T L++ +LPE E  EDA+ GF  FV  NAN++G +L  NDVA AVL+LA++E
Sbjct: 182 CVSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYLATEE 241

Query: 255 ARYISGTNLMVDGGFTSVNHSLRVFR 280
           ++Y+SG NL++DGGF+  NH+L+VF 
Sbjct: 242 SKYVSGLNLVIDGGFSIANHTLQVFE 267

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  245 bits (626), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/279 (50%), Positives = 188/279 (67%), Gaps = 10/279 (3%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           + S+  S   ++LVG+VA+ITGGA+GIG  T RLF KHGA+V +AD+QD LG  +   LG
Sbjct: 3   AGSSHVSADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELG 62

Query: 64  GEPD-TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
             PD + + HCDVT E DV +AVD  V +FG LD+M NNAG+SG PC  + E    +FE+
Sbjct: 63  --PDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFER 120

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           V  +N+ G F G KHAAR+M P  +G+IIS  S++ ++ G   HAYT SKHA++G  +N 
Sbjct: 121 VLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENA 180

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT-ELTAN 241
           A ELG++GIRVNCVSP  VAT LA A +  ++   +A+      +A +AN++G   L A+
Sbjct: 181 AGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAI------MANSANLKGAGALKAD 234

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           D+A A LFLASD+ RY+SG NL VDGG + VN S   FR
Sbjct: 235 DIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFR 273

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  243 bits (619), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/274 (49%), Positives = 181/274 (66%), Gaps = 9/274 (3%)

Query: 7   TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE- 65
           T+++   +RL G+VA+ITGGA GIG++TV LF +HGA V IADV +  G  + +SL    
Sbjct: 23  TNTTLYPKRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHK 82

Query: 66  --PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG--APCPDIREADLSEFE 121
             P   F  CDV+ E DV + V++TV ++G LDI+ NNAG+ G       I + D  EF+
Sbjct: 83  TSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFD 142

Query: 122 KVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            V  +NV+GV  GMKH AR MI +  KG IIS  SVAG +GG+GPHAYT SKHA++GL K
Sbjct: 143 HVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTK 202

Query: 181 NVAAELGKYGIRVNCVSPYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
           N A ELGKYGIRVNC+SP+ VAT +   A       +  +D +     FV   AN++G  
Sbjct: 203 NAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGET 262

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
           L AND+A A L+LASDE++Y++G NL+VDGG T+
Sbjct: 263 LRANDIAEAALYLASDESKYVNGHNLVVDGGVTT 296

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  231 bits (588), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 125/260 (48%), Positives = 170/260 (65%), Gaps = 10/260 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G++A+ITGGA+GIG   VRLF  HGAKV I D Q+ LGQ V  S+G +  +F+  CD
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY-RCD 63

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E++V +AV  TVEK+G LD++ +NAG+   P   + + +L +F++   +NV+G    
Sbjct: 64  VTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFL-DLNLEQFDRTMAVNVRGAAAF 122

Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +KHAAR M+ + T+G+I+   SVA  IGG GPHAYT SKHA+LGL K+    LGKYGIRV
Sbjct: 123 IKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRV 182

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+PYAVAT +         R E+ +     + A    ++G  L A  VA A LFLASD
Sbjct: 183 NGVAPYAVATAI-------NSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASD 235

Query: 254 EARYISGTNLMVDGGFTSVN 273
           ++ Y+SG NL VDGG++ V 
Sbjct: 236 DSAYVSGQNLAVDGGYSVVK 255

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  226 bits (577), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/261 (47%), Positives = 171/261 (65%), Gaps = 9/261 (3%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           Q L G++A+ITGGA+GIG   VRLF  HGAKV I D+Q+ LGQ +  S+G +  +F+  C
Sbjct: 42  QVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFY-RC 100

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +VT E DV +AV  TVEK G LD++ +NAG+  A    + + DL  F++   +NV+G   
Sbjct: 101 NVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEA-FGSVLDLDLEAFDRTMAVNVRGAAA 159

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            +KHAAR M+   T+G+I+   S+A  IGG GPH+YT SKHA+LGL ++  A LG+YGIR
Sbjct: 160 FIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIR 219

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+PY VATG+  A+       E+A+     +     N++G  L A  +A A LFLAS
Sbjct: 220 VNGVAPYGVATGMTSAY------NEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLAS 273

Query: 253 DEARYISGTNLMVDGGFTSVN 273
           D++ YISG NL+VDGGF+ V 
Sbjct: 274 DDSVYISGQNLVVDGGFSVVK 294

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  226 bits (575), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/296 (44%), Positives = 175/296 (59%), Gaps = 33/296 (11%)

Query: 3   NSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL 62
           N  +   +P  +RL G+VA++TGGA GIGE+ VRLF KHGA+V IAD+ D  G+ +  +L
Sbjct: 40  NGATAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASAL 99

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREA---DLS 118
           G  P   F  CDV+ E+DV  AVD  + + G  LD+  NNAG+ G      R     D +
Sbjct: 100 G--PQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAA 157

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           EF++V  +N  G   GMKHAAR M P+  G+I+S+ SVA  +GGLGPHAYT SKHA++GL
Sbjct: 158 EFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGL 217

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLAL-----------------------AHLPEEER 215
            KN A EL  +G+RVNCVSP+ VAT + +                         +P ++ 
Sbjct: 218 TKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQE 277

Query: 216 TEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
            E      R      A ++G  L   D+A AVLFLASDEARYISG NL+VDGG T+
Sbjct: 278 VEKMEEVVRGL----ATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTT 329

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  224 bits (571), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 123/261 (47%), Positives = 167/261 (63%), Gaps = 10/261 (3%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           QRL G++ +ITGGA+GIG    RLF  HGAKV I D+Q+ LGQ V  S+G +  +F+  C
Sbjct: 4   QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY-RC 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+T E +V +AV  TVEK G LD++ +NAG+   P   I + DL  F++   +NV+G   
Sbjct: 63  DITDETEVENAVKFTVEKHGKLDVLFSNAGVM-EPHGSILDLDLEAFDRTMAVNVRGAAA 121

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            +KHAAR M+   T+G+I+   SV   IGG GPH+YT SKHA+LGL ++    LGKYGIR
Sbjct: 122 FIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIR 181

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+PY VATGL           E+ +    ++ +  A ++G  L A  VA+A LFLAS
Sbjct: 182 VNGVAPYGVATGLT-------SYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLAS 234

Query: 253 DEARYISGTNLMVDGGFTSVN 273
           D++ YISG NL VDGG++ V 
Sbjct: 235 DDSVYISGQNLGVDGGYSVVK 255

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  223 bits (567), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/265 (46%), Positives = 169/265 (63%), Gaps = 17/265 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G++ +ITGGA+GIG  +VRLF +HGA+V I DVQD LGQ V  S+G +  +++ HC
Sbjct: 4   KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY-HC 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT E +V +AV  TVEK+G LD++ +NAG+   P   I + +L+E ++   IN++G   
Sbjct: 63  DVTNETEVENAVKFTVEKYGKLDVLFSNAGVI-EPFVSILDLNLNELDRTIAINLRGTAA 121

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            +KHAAR M+ +  +G+I+   SVA  I G  PH YT SKH +LGL K+ +  LGKYGIR
Sbjct: 122 FIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIR 181

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN----ANMQGTELTANDVANAVL 248
           VN V+P+ VAT L       E           N V +N    AN++G  L A  VA A L
Sbjct: 182 VNGVAPFGVATPLVCNGFKMEP----------NVVEQNTSASANLKGIVLKARHVAEAAL 231

Query: 249 FLASDEARYISGTNLMVDGGFTSVN 273
           FLASDE+ Y+SG NL VDGG++ V 
Sbjct: 232 FLASDESAYVSGQNLAVDGGYSVVK 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  211 bits (536), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 119/262 (45%), Positives = 160/262 (61%), Gaps = 11/262 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G++ +ITGGA+GIG    RLF  HGAKV I DVQ+ LGQ V   +G +  +F+  CD
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY-RCD 63

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E +V  AV  TVEK G LD++ +NAG+   P     + DL  F+++  +NV+G    
Sbjct: 64  VTNETEVEDAVKFTVEKHGKLDVLFSNAGVL-EPLESFLDFDLERFDRIMAVNVRGAAAF 122

Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +KHAAR M+ + T+G+I+   SV+  IGG G H YT SKH ++GL ++   +LGKYGIRV
Sbjct: 123 IKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRV 181

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+PYAVAT       P     E       ++      ++G  L A+ VA   LFLASD
Sbjct: 182 NGVAPYAVAT-------PMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASD 234

Query: 254 EARYISGTNLMVDGGFTSVNHS 275
           ++ YISG NL VDGG+T V  S
Sbjct: 235 DSAYISGQNLAVDGGYTVVKPS 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
296875330	280	short chain alcohol dehydrogenase [Citru	1.0	1.0	0.989	1e-160
224053312	280	predicted protein [Populus trichocarpa]	1.0	1.0	0.767	1e-125
356541534	313	PREDICTED: xanthoxin dehydrogenase-like	1.0	0.894	0.764	1e-124
356539484	280	PREDICTED: xanthoxin dehydrogenase-like	1.0	1.0	0.746	1e-121
255637887	280	unknown [Glycine max]	1.0	1.0	0.742	1e-121
255572807	280	short chain alcohol dehydrogenase, putat	1.0	1.0	0.735	1e-120
255544059	280	short chain alcohol dehydrogenase, putat	1.0	1.0	0.735	1e-120
50346893	275	short-chain dehydrogenase/reductase [Sol	0.975	0.992	0.743	1e-118
225449868	280	PREDICTED: xanthoxin dehydrogenase-like	0.989	0.989	0.733	1e-117
297852988	285	hypothetical protein ARALYDRAFT_474354 [	1.0	0.982	0.705	1e-113

>gi|296875330|gb|ADH82118.1| short chain alcohol dehydrogenase [Citrus sinensis]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/280 (98%), Positives = 277/280 (98%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ
Sbjct: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF
Sbjct: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           EKVFDIN KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA LGLNK
Sbjct: 121 EKVFDINXKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAXLGLNK 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA
Sbjct: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           NDVANAVLFLASDEARYI GTNLMVDGGFTSVNHSLRVFR
Sbjct: 241 NDVANAVLFLASDEARYIXGTNLMVDGGFTSVNHSLRVFR 280

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053312|ref|XP_002297758.1| predicted protein [Populus trichocarpa] gi|222845016|gb|EEE82563.1| predicted protein [Populus trichocarpa]

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/280 (76%), Positives = 248/280 (88%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+ ++STDSS +  RL+G+VAL+TGGATGIGES  RLF +HGAKVCIAD+QDNLGQ VC+
Sbjct: 1   MATASSTDSSLSPLRLLGKVALVTGGATGIGESIARLFCRHGAKVCIADLQDNLGQNVCE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEP T + HCDVT E+DV  AVD TV+KFGTLDIMVNNAG+ G PCPDIR+  LS+F
Sbjct: 61  SLGGEPKTCYIHCDVTIEDDVRQAVDFTVDKFGTLDIMVNNAGLGGPPCPDIRKVALSDF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           EKVFD+NVKGVF GMKHAARIMIP  KG+I+S+CSVA AIGG+GPHAYTGSKHAVLGL +
Sbjct: 121 EKVFDVNVKGVFLGMKHAARIMIPLNKGSIVSLCSVASAIGGIGPHAYTGSKHAVLGLTR 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           +VAAELGK+GIRVNCVSPY VAT LA+AHLPE+ERTEDA++GFR+F+ RNAN+QG ELT 
Sbjct: 181 SVAAELGKHGIRVNCVSPYGVATSLAVAHLPEDERTEDALIGFRSFIGRNANLQGVELTV 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVANAVLFLASDEARYISG NLM+DGGFT  NHSLRVFR
Sbjct: 241 DDVANAVLFLASDEARYISGDNLMLDGGFTCTNHSLRVFR 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541534|ref|XP_003539230.1| PREDICTED: xanthoxin dehydrogenase-like [Glycine max]

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/280 (76%), Positives = 243/280 (86%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           MS + +  +S   QRL+G+VAL+TGGA+GIGES VRLFH HGAK+CIADVQDNLG+QVCQ
Sbjct: 34  MSTTGTVLASTPTQRLLGKVALVTGGASGIGESIVRLFHIHGAKICIADVQDNLGKQVCQ 93

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLG E +  F HCDVT E+DV  AVD TV KFGTL I+VNNAGISG+PC DIR ADLSEF
Sbjct: 94  SLGDEANVVFVHCDVTVEDDVSHAVDFTVGKFGTLHIIVNNAGISGSPCSDIRNADLSEF 153

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVF +N KGVFHGMKHAARIMIP+ KG+IIS+CSVA AIGGLGPHAYTGSK+AVLGL K
Sbjct: 154 DKVFSVNTKGVFHGMKHAARIMIPKKKGSIISLCSVASAIGGLGPHAYTGSKYAVLGLTK 213

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           NVAAELGK+ IRVNCVSPY VATGLALAHLPE+ERT+DA+V FR+F  R AN+QG ELT 
Sbjct: 214 NVAAELGKHAIRVNCVSPYGVATGLALAHLPEDERTDDALVSFRDFTGRMANLQGVELTT 273

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVANAVLFLASD+A+YISG NLMVDGGFTS NHSL+VFR
Sbjct: 274 HDVANAVLFLASDDAKYISGENLMVDGGFTSANHSLQVFR 313

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539484|ref|XP_003538228.1| PREDICTED: xanthoxin dehydrogenase-like [Glycine max]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/280 (74%), Positives = 244/280 (87%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           MS + +  +S    RL+G+VAL+TGGA+GIGES VRLFH HGAK+CIADVQDNLG+Q+C+
Sbjct: 1   MSTTGNVLASTPTPRLLGKVALVTGGASGIGESIVRLFHIHGAKICIADVQDNLGKQICE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLG E +  F HCDVT E+DV  AV+ TV KFGTLDI+VNNAGISG+PCPDIR+ADLSEF
Sbjct: 61  SLGDEANVVFVHCDVTVEDDVSHAVNFTVGKFGTLDIIVNNAGISGSPCPDIRDADLSEF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVF IN KGVFHGMKH+AR+MIP  KG+IIS+ SVA A+GG+G HAYTGSKHAVLGL K
Sbjct: 121 DKVFSINAKGVFHGMKHSARVMIPNKKGSIISLSSVASALGGIGIHAYTGSKHAVLGLTK 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           +VAAELGK+ IRVNCVSPYAVATGLALAHLPE++RTEDA+ GFR+F  R AN+QG ELT 
Sbjct: 181 SVAAELGKHSIRVNCVSPYAVATGLALAHLPEDQRTEDALAGFRDFTGRMANLQGVELTT 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +D+ANAVLFLASDEARYISG NLMVDGGFTSVNHSL+VF+
Sbjct: 241 HDIANAVLFLASDEARYISGENLMVDGGFTSVNHSLQVFK 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637887|gb|ACU19262.1| unknown [Glycine max]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/280 (74%), Positives = 243/280 (86%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           MS + +  +S    RL+G+VAL+TGGA+GIGES VRLFH HGAK+CIADVQDNLG+Q+C+
Sbjct: 1   MSTTGNVLASTPTPRLLGKVALVTGGASGIGESIVRLFHIHGAKICIADVQDNLGKQICE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLG E +  F HCDVT E+DV  AV+ TV KFGTLDI+VNNAGISG+PCPDIR+ADLSEF
Sbjct: 61  SLGDEANVVFVHCDVTVEDDVSHAVNFTVGKFGTLDIIVNNAGISGSPCPDIRDADLSEF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVF IN KGVFHGMKH+AR+MIP  KG+IIS+ SVA A+GG+G HAYTGSKHAVLGL K
Sbjct: 121 DKVFSINAKGVFHGMKHSARVMIPNKKGSIISLSSVASALGGIGIHAYTGSKHAVLGLTK 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           +VAAELGK+ IRVNCVSPYAVATGLALAHLPE++RTEDA+ GFR+F  R AN+QG ELT 
Sbjct: 181 SVAAELGKHSIRVNCVSPYAVATGLALAHLPEDQRTEDALAGFRDFTGRMANLQGVELTT 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +D+ANAVLFLASDEARYISG N MVDGGFTSVNHSL+VF+
Sbjct: 241 HDIANAVLFLASDEARYISGENFMVDGGFTSVNHSLQVFK 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572807|ref|XP_002527336.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223533336|gb|EEF35088.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/280 (73%), Positives = 244/280 (87%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+ ++S  S+ + QRL+G+VAL+TGG+TGIGES VRLFHKHGAKVC+ D++DNLGQ VC+
Sbjct: 1   MATTSSVASTLSCQRLLGKVALVTGGSTGIGESIVRLFHKHGAKVCLVDLEDNLGQNVCE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEP+  + HCDVT E++V  AV+ TV+KFGTLDIMVNNAG+SG PCPDIR  +LS+F
Sbjct: 61  SLGGEPNICYFHCDVTVEDEVQRAVEFTVDKFGTLDIMVNNAGLSGPPCPDIRYTELSDF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVFD+NVKG F GMKHAARIMIP  KG+IIS+CSVA  IGGLGPH YTGSKHAVLGL +
Sbjct: 121 QKVFDVNVKGTFIGMKHAARIMIPLNKGSIISLCSVASTIGGLGPHGYTGSKHAVLGLTR 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           NVAAELGK+GIRVNCVSPYAV T LALAHL E+ERTEDAM GF+ F  +NAN+QG ELTA
Sbjct: 181 NVAAELGKHGIRVNCVSPYAVPTNLALAHLHEDERTEDAMAGFKAFARKNANLQGVELTA 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVAN+VLFLAS+E+RYISG NLM+DGGFT+ NHSLRVFR
Sbjct: 241 DDVANSVLFLASEESRYISGENLMIDGGFTNSNHSLRVFR 280

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544059|ref|XP_002513092.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223548103|gb|EEF49595.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/280 (73%), Positives = 242/280 (86%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+ ++S  S+   QRL+G+VAL+TGG+TGIGES VRLFHKHGAKVC+ D+ DNLGQ VC+
Sbjct: 1   MATTSSVGSTLYCQRLLGKVALVTGGSTGIGESIVRLFHKHGAKVCLVDLDDNLGQNVCK 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEP+  + HCDVT E++V  AVD TV+KFGTLDIMVNNAG+SG PC DIR  +LS+F
Sbjct: 61  SLGGEPNICYFHCDVTVEDEVQRAVDFTVDKFGTLDIMVNNAGLSGPPCSDIRCTELSDF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           +KVFD+N KG F GMKHAAR+MIP  +G+IIS+CSVA  IGGLGPHAYTGSKHAVLGL +
Sbjct: 121 QKVFDVNTKGTFIGMKHAARVMIPLNRGSIISLCSVASTIGGLGPHAYTGSKHAVLGLTR 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           NVAAELGK+GIRVNCVSPYAV T LALAHLPE+ERTEDAM GF+ F  +NANMQG ELTA
Sbjct: 181 NVAAELGKHGIRVNCVSPYAVPTNLALAHLPEDERTEDAMAGFKAFARKNANMQGIELTA 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVAN+VLFLAS+E+RYISG NLM+DGGFT+ NHSLRVFR
Sbjct: 241 DDVANSVLFLASEESRYISGANLMIDGGFTTSNHSLRVFR 280

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|50346893|gb|AAT75153.1| short-chain dehydrogenase/reductase [Solanum tuberosum]

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/273 (74%), Positives = 237/273 (86%)

Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD 67
           D+S  +QRL+G+VAL+TGGATGIGES VRLFHKHGAKVCIAD++D +GQ VC++LG + +
Sbjct: 3   DTSLPIQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIADIRDEVGQHVCETLGNDQN 62

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
             F HCDVT E DV +AVD TV+KFGTLDIMVNNAG+SG P  DIR+ +LS FE V D+N
Sbjct: 63  VCFIHCDVTVEADVSNAVDFTVQKFGTLDIMVNNAGLSGPPIRDIRDYELSVFENVLDVN 122

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           +KG F GMKHAARIMIP  KG I+S+CSVA AIGG+GPH Y  SK+AVLGL +NVAAE+G
Sbjct: 123 LKGAFLGMKHAARIMIPLKKGAIVSLCSVASAIGGIGPHGYAASKYAVLGLTQNVAAEMG 182

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           K+G+RVNCVSPYAVATGLALAHLPE+E+T+DAM GFR+FVARNAN+QG EL ANDVANAV
Sbjct: 183 KHGVRVNCVSPYAVATGLALAHLPEDEKTDDAMEGFRDFVARNANLQGVELMANDVANAV 242

Query: 248 LFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           LFLASDE+RYISG NLMVDGGF+ VNHSLRVFR
Sbjct: 243 LFLASDESRYISGHNLMVDGGFSCVNHSLRVFR 275

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449868|ref|XP_002265724.1| PREDICTED: xanthoxin dehydrogenase-like [Vitis vinifera]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/278 (73%), Positives = 238/278 (85%), Gaps = 1/278 (0%)

Query: 4   SNSTDSSP-AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL 62
           + S D+SP   QRL+G+VAL+TGGATGIGES VRLF K GAKVCI DVQD+LGQ++C +L
Sbjct: 3   ATSIDNSPLPSQRLLGKVALVTGGATGIGESIVRLFLKQGAKVCIVDVQDDLGQKLCDTL 62

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
           GG+P+  F HCDVT E+DVC AVD TV KFGTLDIMVNNAG++G PC DIR  ++S FEK
Sbjct: 63  GGDPNVSFFHCDVTIEDDVCHAVDFTVTKFGTLDIMVNNAGMAGPPCSDIRNVEVSMFEK 122

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           VFD+NVKGVF GMKHAARIMIP  KGTIIS+CSV+ AI G+GPHAYTGSK AV GL ++V
Sbjct: 123 VFDVNVKGVFLGMKHAARIMIPLKKGTIISLCSVSSAIAGVGPHAYTGSKCAVAGLTQSV 182

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           AAE+G +GIRVNC+SPYA+ATGLALAHLPE+ERTEDAM GFR FV +NAN+QG ELT +D
Sbjct: 183 AAEMGGHGIRVNCISPYAIATGLALAHLPEDERTEDAMAGFRAFVGKNANLQGVELTVDD 242

Query: 243 VANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           VA+A +FLASDEARYISG NLM+DGGF+  NHSLRVFR
Sbjct: 243 VAHAAVFLASDEARYISGLNLMLDGGFSCTNHSLRVFR 280

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852988|ref|XP_002894375.1| hypothetical protein ARALYDRAFT_474354 [Arabidopsis lyrata subsp. lyrata] gi|297340217|gb|EFH70634.1| hypothetical protein ARALYDRAFT_474354 [Arabidopsis lyrata subsp. lyrata]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/285 (70%), Positives = 235/285 (82%), Gaps = 5/285 (1%)

Query: 1   MSNSNSTDSS--PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV 58
           MS +  + SS  P   RL+G+VALITGGATGIGES VRLFHKHGA VCI D+QD+LG +V
Sbjct: 1   MSTNTPSSSSALPPCDRLLGKVALITGGATGIGESIVRLFHKHGANVCIVDLQDDLGNEV 60

Query: 59  CQSL-GGEPDTFFC--HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA 115
           C+SL  GE     C  H DV  E+D+ +AVD  V+KFGTLDI++NNAG+ GAPCPDIR  
Sbjct: 61  CKSLLSGETKETACFIHGDVRVEDDISNAVDFAVKKFGTLDILINNAGLCGAPCPDIRNN 120

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
            LSEFEK+FD+NVKG F  MKHAAR+MIP+ KG+I+S+CSV G +GG+GPHAY GSKHAV
Sbjct: 121 SLSEFEKIFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVMGGIGPHAYVGSKHAV 180

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           LGL ++VAAELG++GIRVNCVSPYAVAT LALAHLPEEERTEDA VGFRNF A NAN++G
Sbjct: 181 LGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKG 240

Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
            ELT +DVANAVLFLASDE+RYISG NLM+DGGFT  NHS +VFR
Sbjct: 241 VELTVDDVANAVLFLASDESRYISGDNLMIDGGFTCTNHSFKVFR 285

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.992	0.975	0.705	1.4e-105
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.957	0.884	0.490	4.8e-62
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.946	0.772	0.459	1.1e-57
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.889	0.968	0.482	3.6e-57
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.903	0.826	0.463	5.9e-57
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.896	0.842	0.476	2e-56
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.892	0.965	0.484	1.4e-55
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.896	0.976	0.473	3.7e-55
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.896	0.972	0.465	3.8e-53
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.914	0.853	0.424	1.7e-52

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
 Identities = 199/282 (70%), Positives = 236/282 (83%)

Query:     2 SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS 61
             + S+S  S P+ QRL+G+VALITGGATGIGES VRLFHKHGAKVCI D+QD+LG +VC+S
Sbjct:     5 TESSSYSSLPS-QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKS 63

Query:    62 L--GGEPDT-FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
             L  G   +T FF H DV  E+D+ +AVD  V+ FGTLDI++NNAG+ GAPCPDIR   LS
Sbjct:    64 LLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLS 123

Query:   119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
             EFE  FD+NVKG F  MKHAAR+MIP+ KG+I+S+CSV G +GG+GPH+Y GSKHAVLGL
Sbjct:   124 EFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGL 183

Query:   179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
              ++VAAELG++GIRVNCVSPYAVAT LALAHLPEEERTEDA VGFRNF A NAN++G EL
Sbjct:   184 TRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVEL 243

Query:   239 TANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
             T +DVANAVLFLASD++RYISG NLM+DGGFT  NHS +VFR
Sbjct:   244 TVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTNHSFKVFR 285

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 136/277 (49%), Positives = 182/277 (65%)

Query:     7 TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE- 65
             T+++   +RL G+VA+ITGGA GIG++TV LF +HGA V IADV +  G  + +SL    
Sbjct:    23 TNTTLYPKRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHK 82

Query:    66 --PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG--APCPDIREADLSEFE 121
               P   F  CDV+ E DV + V++TV ++G LDI+ NNAG+ G       I + D  EF+
Sbjct:    83 TSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFD 142

Query:   122 KVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
              V  +NV+GV  GMKH AR MI +  KG IIS  SVAG +GG+GPHAYT SKHA++GL K
Sbjct:   143 HVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTK 202

Query:   181 NVAAELGKYGIRVNCVSPYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
             N A ELGKYGIRVNC+SP+ VAT +   A       +  +D +     FV   AN++G  
Sbjct:   203 NAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGET 262

Query:   238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNH 274
             L AND+A A L+LASDE++Y++G NL+VDGG T+  +
Sbjct:   263 LRANDIAEAALYLASDESKYVNGHNLVVDGGVTTARN 299

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 124/270 (45%), Positives = 175/270 (64%)

Query:     4 SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
             S+S+ S    ++L G+VALITGGA+GIG++T   F  HGAKV IAD+Q  +G++  Q LG
Sbjct:    66 SSSSSSHSTSRKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELG 125

Query:    64 GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
               P   +  CDVTKE D+ +AVD  V     LDIM NNAGI     P I + DL+ F+KV
Sbjct:   126 --PSCAYFPCDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKV 183

Query:   124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
              + NV+GV  G+KHAAR+MIP+  G+II   SV G +GGL  H Y+ SK AV+G+ ++ A
Sbjct:   184 INTNVRGVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTA 243

Query:   184 AELGKYGIRVNCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTELTAND 242
             +EL K+ IRVNC+SP+A+ T   +  + +     +D+ +     V     + G      D
Sbjct:   244 SELCKHRIRVNCISPFAITTSFVMDEMRQIYPGVDDSRL--IQIVQSTGVLNGEVCEPTD 301

Query:   243 VANAVLFLASDEARYISGTNLMVDGGFTSV 272
             VANA ++LASD+++Y++G NL+VDGGFT+V
Sbjct:   302 VANAAVYLASDDSKYVNGHNLVVDGGFTTV 331

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 125/259 (48%), Positives = 169/259 (65%)

Query:    15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             RL G++A+ITGGA+GIG   VRLF  HGAKV I D Q+ LGQ V  S+G +  +F+  CD
Sbjct:     5 RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFY-RCD 63

Query:    75 VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
             VT E++V +AV  TVEK+G LD++ +NAG+   P     + +L +F++   +NV+G    
Sbjct:    64 VTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQP-GSFLDLNLEQFDRTMAVNVRGAAAF 122

Query:   135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +KHAAR M+ + T+G+I+   SVA  IGG GPHAYT SKHA+LGL K+    LGKYGIRV
Sbjct:   123 IKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRV 182

Query:   194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             N V+PYAVAT +         R E+ +     + A    ++G  L A  VA A LFLASD
Sbjct:   183 NGVAPYAVATAI-------NSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASD 235

Query:   254 EARYISGTNLMVDGGFTSV 272
             ++ Y+SG NL VDGG++ V
Sbjct:   236 DSAYVSGQNLAVDGGYSVV 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 121/261 (46%), Positives = 173/261 (66%)

Query:    14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             ++L G+VALITGGA+G+G++T   F +HGA+V IAD+    G +  + LG E +  F  C
Sbjct:    39 KKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAE--FVRC 96

Query:    74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKGVF 132
             DVT E D+  AV++TVE++G LD+M NNAGI G   P  I + D++EFE+V  INV GV 
Sbjct:    97 DVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVV 156

Query:   133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              G+KHAA+ MIP   G I+   SVAG  GGL PH+YT SK    G+ K+ A+EL ++G+R
Sbjct:   157 SGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVR 216

Query:   193 VNCVSPYAVATGLALAHLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
             +NC+SP  VAT L L++L +   + +E+ +   R  V     ++G E    DVA A L+L
Sbjct:   217 INCISPGTVATPLTLSYLQKVFPKVSEEKL---RETVKGMGELKGAECEEADVAKAALYL 273

Query:   251 ASDEARYISGTNLMVDGGFTS 271
             AS++ +Y++G NL+VDGG T+
Sbjct:   274 ASNDGKYVTGHNLVVDGGMTA 294

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 124/260 (47%), Positives = 171/260 (65%)

Query:    14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             Q L G++A+ITGGA+GIG   VRLF  HGAKV I D+Q+ LGQ +  S+G +  +F+  C
Sbjct:    42 QVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFY-RC 100

Query:    74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             +VT E DV +AV  TVEK G LD++ +NAG+  A    + + DL  F++   +NV+G   
Sbjct:   101 NVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEA-FGSVLDLDLEAFDRTMAVNVRGAAA 159

Query:   134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +KHAAR M+   T+G+I+   S+A  IGG GPH+YT SKHA+LGL ++  A LG+YGIR
Sbjct:   160 FIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIR 219

Query:   193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
             VN V+PY VATG+  A+       E+A+     +     N++G  L A  +A A LFLAS
Sbjct:   220 VNGVAPYGVATGMTSAY------NEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLAS 273

Query:   253 DEARYISGTNLMVDGGFTSV 272
             D++ YISG NL+VDGGF+ V
Sbjct:   274 DDSVYISGQNLVVDGGFSVV 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 126/260 (48%), Positives = 170/260 (65%)

Query:    14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             QRL G++ +ITGGA+GIG    RLF  HGAKV I D+Q+ LGQ V  S+G +  +F+  C
Sbjct:     4 QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFY-RC 62

Query:    74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             D+T E +V +AV  TVEK G LD++ +NAG+   P   I + DL  F++   +NV+G   
Sbjct:    63 DITDETEVENAVKFTVEKHGKLDVLFSNAGVM-EPHGSILDLDLEAFDRTMAVNVRGAAA 121

Query:   134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +KHAAR M+   T+G+I+   SV   IGG GPH+YT SKHA+LGL ++    LGKYGIR
Sbjct:   122 FIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIR 181

Query:   193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
             VN V+PY VATGL   +   EE  +  MV   ++ +  A ++G  L A  VA+A LFLAS
Sbjct:   182 VNGVAPYGVATGLTSYN---EETVK--MV--EDYCSATAILKGVVLKARHVADAALFLAS 234

Query:   253 DEARYISGTNLMVDGGFTSV 272
             D++ YISG NL VDGG++ V
Sbjct:   235 DDSVYISGQNLGVDGGYSVV 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 123/260 (47%), Positives = 170/260 (65%)

Query:    14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             +RL G++ +ITGGA+GIG  +VRLF +HGA+V I DVQD LGQ V  S+G +  +++ HC
Sbjct:     4 KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYY-HC 62

Query:    74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             DVT E +V +AV  TVEK+G LD++ +NAG+   P   I + +L+E ++   IN++G   
Sbjct:    63 DVTNETEVENAVKFTVEKYGKLDVLFSNAGVI-EPFVSILDLNLNELDRTIAINLRGTAA 121

Query:   134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +KHAAR M+ +  +G+I+   SVA  I G  PH YT SKH +LGL K+ +  LGKYGIR
Sbjct:   122 FIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIR 181

Query:   193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
             VN V+P+ VAT L       E    +     +N  A +AN++G  L A  VA A LFLAS
Sbjct:   182 VNGVAPFGVATPLVCNGFKMEPNVVE-----QNTSA-SANLKGIVLKARHVAEAALFLAS 235

Query:   253 DEARYISGTNLMVDGGFTSV 272
             DE+ Y+SG NL VDGG++ V
Sbjct:   236 DESAYVSGQNLAVDGGYSVV 255

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 122/262 (46%), Positives = 167/262 (63%)

Query:    15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             RL G++ +ITGGA+GIG    RLF  HGAKV I DVQ+ LGQ V   +G +  +F+  CD
Sbjct:     5 RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFY-RCD 63

Query:    75 VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
             VT E +V  AV  TVEK G LD++ +NAG+   P     + DL  F+++  +NV+G    
Sbjct:    64 VTNETEVEDAVKFTVEKHGKLDVLFSNAGVL-EPLESFLDFDLERFDRIMAVNVRGAAAF 122

Query:   135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +KHAAR M+ + T+G+I+   SV+  IGG G H YT SKH ++GL ++   +LGKYGIRV
Sbjct:   123 IKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRV 181

Query:   194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             N V+PYAVAT +  +H   +E T   +  +  F A+   ++G  L A+ VA   LFLASD
Sbjct:   182 NGVAPYAVATPMT-SH---DEVTGKQLEDY--FDAKGI-LKGMVLKASHVAQVALFLASD 234

Query:   254 EARYISGTNLMVDGGFTSVNHS 275
             ++ YISG NL VDGG+T V  S
Sbjct:   235 DSAYISGQNLAVDGGYTVVKPS 256

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 113/266 (42%), Positives = 166/266 (62%)

Query:    10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
             S + ++L G+VA+ITGGA+GIG++T   F   GA+V I D+ +  G  V   LG      
Sbjct:    30 STSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSA--AH 87

Query:    70 FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINV 128
             F  CDVT+EE +  AV+  V + G LD+M+N+AGIS     P I + D+  ++KV  +NV
Sbjct:    88 FLRCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNV 147

Query:   129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
             +G   G+KHAAR MIP   G+I+ + S++G +GGLGPHAY+ SK  + G+ K VA+EL K
Sbjct:   148 RGTVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCK 207

Query:   189 YGIRVNCVSPYAVATGLALAHLPE----EERTEDAMVGFRNFVARNANMQGTELTANDVA 244
             +G+R+NC+SP  + T L L    E        E+ ++   N       ++G +    DVA
Sbjct:   208 HGLRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVN---ATGELKGEKCEEIDVA 264

Query:   245 NAVLFLASDEARYISGTNLMVDGGFT 270
              A L+LASD+A++++G NL+VDGGFT
Sbjct:   265 KAALYLASDDAKFVTGHNLVVDGGFT 290

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3667	0.8535	0.9715	yes	no
Q8KWS9	BACC_BACAM	1, ., -, ., -, ., -	0.3513	0.8857	0.9763	yes	no
F1SWA0	ZERSY_ZINZE	1, ., 1, ., 1, ., 3, 2, 6	0.6503	0.95	0.9962	N/A	no
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
Q8KWT4	BACC2_BACIU	1, ., -, ., -, ., -	0.3643	0.8857	0.9802	yes	no
P69166	HSD_MYCBO	1, ., 1, ., 1, ., 5, 3	0.3818	0.8357	0.9	yes	no
P69167	HSD_MYCTU	1, ., 1, ., 1, ., 5, 3	0.3818	0.8357	0.9	yes	no
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
Q9C826	ABA2_ARATH	1, ., 1, ., 1, ., 2, 8, 8	0.7222	0.9535	0.9368	yes	no
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.3281	0.8392	0.9552	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3153	0.8464	0.9556	yes	no
P50941	FABG_RICPR	1, ., 1, ., 1, ., 1, 0, 0	0.3590	0.8428	0.9792	yes	no
Q9MYP6	DHB14_BOVIN	1, ., 1, ., 1, ., -	0.3696	0.8571	0.8888	yes	no
P39640	BACC_BACSU	1, ., -, ., -, ., -	0.3643	0.8857	0.9802	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3381	0.8321	0.8859	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3169	0.8285	0.9354	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.288	0.991
3rd Layer	1.3.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.47	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.28	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	0.0
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-127
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-77
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-69
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-67
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-66
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	5e-61
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-60
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-60
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-60
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-58
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-58
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-58
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	7e-56
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	6e-55
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-54
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-53
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	5e-53
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	7e-53
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-52
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	6e-52
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-51
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-50
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-50
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	7e-50
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	9e-50
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	7e-49
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-48
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-48
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-47
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-47
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-47
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-47
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-47
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-46
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-46
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	8e-46
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-45
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-44
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	5e-44
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	9e-44
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-43
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-43
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-43
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	6e-43
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-43
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	9e-43
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-42
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-42
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-42
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-42
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-41
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-41
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	3e-41
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-41
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	8e-41
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	3e-40
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	3e-40
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	6e-40
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	6e-40
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-40
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-39
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	3e-39
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-39
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-39
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-39
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	6e-39
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-38
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-38
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-38
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-38
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-38
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	6e-38
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-38
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	9e-38
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-37
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-37
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-37
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-37
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-36
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-36
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-36
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-36
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-36
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-36
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-35
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-35
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-35
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-35
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-35
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	4e-35
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-34
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-34
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-34
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-34
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	3e-33
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	4e-33
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-33
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	8e-33
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	9e-33
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-32
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-32
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-32
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-32
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	6e-32
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-31
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-31
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	5e-31
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	6e-31
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	6e-31
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	6e-31
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	7e-31
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	8e-31
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	9e-31
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	9e-31
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-30
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-30
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-30
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-29
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-29
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-29
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-29
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	4e-29
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	4e-29
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-28
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-28
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	6e-28
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	9e-28
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	9e-28
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-27
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-27
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	4e-27
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-26
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-26
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-26
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-26
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-26
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	6e-26
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	7e-26
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	9e-26
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-25
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-25
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-25
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-25
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	9e-25
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-24
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-24
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-24
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	3e-24
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-24
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	4e-24
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	5e-24
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	7e-24
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-23
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-23
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-23
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-23
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-23
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	3e-23
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-23
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	8e-23
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	8e-23
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	8e-23
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-22
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-22
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-22
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	9e-22
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-21
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-21
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	7e-21
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	1e-20
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-20
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	3e-20
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	4e-20
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	7e-20
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	9e-20
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-19
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-19
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-19
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	8e-19
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	9e-19
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-18
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-18
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-18
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-18
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	4e-18
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-17
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	3e-17
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	6e-17
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	1e-16
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-16
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-16
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	5e-16
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-15
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-15
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-15
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	5e-15
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	7e-15
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	9e-15
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-14
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-14
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	4e-14
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	5e-14
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-14
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-13
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-13
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	4e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	4e-13
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-13
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	8e-13
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	3e-12
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-12
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	3e-12
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	6e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-11
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-10
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	1e-10
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	2e-10
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	2e-10
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-10
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-10
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	5e-10
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	9e-10
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-09
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	1e-09
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	6e-09
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	9e-09
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-08
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	5e-08
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	7e-08
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	7e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-07
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	2e-07
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	5e-07
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	8e-07
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	1e-06
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	2e-06
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-06
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	4e-06
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	7e-06
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	7e-06
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	7e-06
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	7e-06
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	7e-06
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-05
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	1e-05
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-05
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	2e-05
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	3e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	4e-05
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	8e-05
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	1e-04
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	1e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-04
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-04
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	2e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	4e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	5e-04
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	0.003
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	0.004

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  508 bits (1310), Expect = 0.0
 Identities = 216/280 (77%), Positives = 245/280 (87%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+ ++S+ SS   QRL+G+VAL+TGGATGIGES VRLFHKHGAKVCI D+QD+LGQ VC 
Sbjct: 1   MATASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           SLGGEP+  F HCDVT E+DV  AVD TV+KFGTLDIMVNNAG++G PCPDIR  +LSEF
Sbjct: 61  SLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEF 120

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           EKVFD+NVKGVF GMKHAARIMIP  KG+I+S+CSVA AIGGLGPHAYTGSKHAVLGL +
Sbjct: 121 EKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTR 180

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           +VAAELGK+GIRVNCVSPYAV T LALAHLPE+ERTEDA+ GFR F  +NAN++G ELT 
Sbjct: 181 SVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTV 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           +DVANAVLFLASDEARYISG NLM+DGGFT  NHSLRVFR
Sbjct: 241 DDVANAVLFLASDEARYISGLNLMIDGGFTCTNHSLRVFR 280

Length = 280

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  361 bits (927), Expect = e-127
 Identities = 156/257 (60%), Positives = 189/257 (73%), Gaps = 9/257 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VA+ITGGA+GIGE+T RLF KHGA+V IAD+ D+ GQ V   LG +PD  F HCD
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELG-DPDISFVHCD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E DV +AVD  V +FG LDIM NNAG+ GAPC  I E  L EFE+V D+NV G F G
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLG 119

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            KHAAR+MIP  KG+I+S+ SVAG +GGLGPHAYT SKHAVLGL ++ A ELG++GIRVN
Sbjct: 120 TKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVN 179

Query: 195 CVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           CVSPY VAT L  A    E+E  E+A+ G        AN++GT L   D+A AVL+LASD
Sbjct: 180 CVSPYGVATPLLTAGFGVEDEAIEEAVRG-------AANLKGTALRPEDIAAAVLYLASD 232

Query: 254 EARYISGTNLMVDGGFT 270
           ++RY+SG NL+VDGG T
Sbjct: 233 DSRYVSGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  233 bits (597), Expect = 9e-77
 Identities = 99/263 (37%), Positives = 139/263 (52%), Gaps = 20/263 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VA++TG ++GIGE   R F   GA+V + D  +   ++V   +           
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAA 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+ E DV +AV   +E+FG++DI+VNNAG +    P + + D +EF+++F +NVK  + 
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGP-LLDVDEAEFDRIFAVNVKSPYL 119

Query: 134 GMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             + A   M  +  G I+++ S AG     GLG   Y  SK AV+ L K +AAELG   I
Sbjct: 120 WTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLG--WYNASKGAVITLTKALAAELGPDKI 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
           RVN V+P  V TGL       E   E           R   +    L    T  D+ANA 
Sbjct: 178 RVNAVAPVVVETGLL-EAFMGEPTPE----------NRAKFLATIPLGRLGTPEDIANAA 226

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
           LFLASDEA +I+G  L+VDGG  
Sbjct: 227 LFLASDEASWITGVTLVVDGGRC 249

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  212 bits (542), Expect = 7e-69
 Identities = 94/246 (38%), Positives = 131/246 (53%), Gaps = 12/246 (4%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           AL+TG ++GIG +  R   + GAKV +AD  +    ++        +      DV+ EED
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
           V + V+  +E+FG LDI+VNNAGI+      + E    ++++V D+N+ GVF   + A  
Sbjct: 61  VEALVEEALEEFGRLDILVNNAGIARPG--PLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
            M  Q  G I++I SVAG     G  AY  SK A+ GL +++A EL  YGIRVN V+P  
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 201 VATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 260
           V T +     PEE   E             A   G   T  +VA AV+FLASDEA YI+G
Sbjct: 179 VDTPMLAKLGPEEAEKE----------LAAAIPLGRLGTPEEVAEAVVFLASDEASYITG 228

Query: 261 TNLMVD 266
             + VD
Sbjct: 229 QVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  209 bits (535), Expect = 2e-67
 Identities = 90/258 (34%), Positives = 128/258 (49%), Gaps = 18/258 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH 72
             L G+ AL+TG + GIG +        GAKV I D  +   + +   L     +     
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
            DV+ E  V + ++  VE FG LDI+VNNAGI+  A  P + E D   +++V D+N+ G 
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEED---WDRVIDVNLTGT 117

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F+ ++ A   MI    G I++I SV+G  G  G   Y+ +K  V+G  K +A EL   GI
Sbjct: 118 FNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGI 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
            VN V+P  + T      LPEE + E    +                    +VANAV FL
Sbjct: 178 TVNAVAPGFIDTD-MTEGLPEEVKAEILKEIPLGRLG-----------QPEEVANAVAFL 225

Query: 251 ASDEARYISGTNLMVDGG 268
           ASD A YI+G  + V+GG
Sbjct: 226 ASDAASYITGQVIPVNGG 243

Length = 246

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  207 bits (528), Expect = 2e-66
 Identities = 96/261 (36%), Positives = 143/261 (54%), Gaps = 17/261 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGGEP-DTFFC 71
            +L+G+VA++TG + GIG +   L  K GAKV IA D+ +   Q++ + +  E  D    
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             DV+ EEDV + V+  VEKFG +DI+VNNAGIS       + +    E+++V D+N+ G
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGL---VTDMTDEEWDRVIDVNLTG 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V    ++A   MI +  G I++I S+ G IG      Y+ SK AV    K +A EL   G
Sbjct: 118 VMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSG 177

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN V+P A+ T +  +   EE++   A       + +            ++A  VLFL
Sbjct: 178 IRVNAVAPGAIDTEM-WSSFSEEDKEGLAEEIPLGRLGK----------PEEIAKVVLFL 226

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD+A YI+G  + VDGG+T 
Sbjct: 227 ASDDASYITGQIITVDGGWTC 247

Length = 247

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  193 bits (492), Expect = 5e-61
 Identities = 99/261 (37%), Positives = 137/261 (52%), Gaps = 14/261 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---QVCQSLGGEPDTFFC 71
              G+VAL+TGGA GIG +T   F + GAKV +AD     G+    + +  GGE    F 
Sbjct: 4   TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE--ALFV 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CDVT++ +V + V+ T+  +G LD   NNAGI       + E   +EF+ +  +NVKGV
Sbjct: 62  ACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGV 120

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           +  MK+   +M+ Q  G I++  SVAG         Y  SKHAV+GL K+ A E  K GI
Sbjct: 121 WLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGI 180

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V P  + T +         R  +A      F A   +  G      +VA+AVL+L 
Sbjct: 181 RVNAVCPAVIDTDMF-------RRAYEADPRKAEFAA-AMHPVGRIGKVEEVASAVLYLC 232

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SD A + +G  LMVDGG T+ 
Sbjct: 233 SDGASFTTGHALMVDGGATAQ 253

Length = 253

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  192 bits (490), Expect = 1e-60
 Identities = 88/258 (34%), Positives = 132/258 (51%), Gaps = 17/258 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTF-FC 71
             L+GRVAL+TG A G+G +      + GA V +     +   +++ +++          
Sbjct: 2   GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAV 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKG 130
             DVT +  + +AV   VE+FG +DI+VNNAGI    P  D+ +    E+++V D+N+ G
Sbjct: 62  QADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDD---EWDEVIDVNLSG 118

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           VFH ++     M  Q  G I++I SVAG  G  G   Y  +K  ++GL K +A EL +YG
Sbjct: 119 VFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYG 178

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V+P  + T +  A + E    +DA               G   T  D+A AV FL
Sbjct: 179 ITVNMVAPGDIDTDMKEATIEEAREAKDAETPL-----------GRSGTPEDIARAVAFL 227

Query: 251 ASDEARYISGTNLMVDGG 268
            SD + YI+G  + V GG
Sbjct: 228 CSDASDYITGQVIEVTGG 245

Length = 249

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  192 bits (489), Expect = 1e-60
 Identities = 95/261 (36%), Positives = 136/261 (52%), Gaps = 16/261 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VA++TGGA G+G +  RL    GAKV ++D+ D  GQ     LG      F H 
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDA--ARFFHL 58

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT E+   + VD   E FG LD++VNNAGI       +    L E+ ++ DIN+ GVF 
Sbjct: 59  DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGG--TVETTTLEEWRRLLDINLTGVFL 116

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGI 191
           G +     M     G+II++ S+ G +G     AY  SK AV GL K+ A E     YGI
Sbjct: 117 GTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGI 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V P  + T +    L  +    +                G     +++A AV++LA
Sbjct: 177 RVNSVHPGYIYTPMTDELLIAQGEMGN----------YPNTPMGRAGEPDEIAYAVVYLA 226

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SDE+ +++G+ L+VDGG+T+ 
Sbjct: 227 SDESSFVTGSELVVDGGYTAG 247

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  191 bits (487), Expect = 3e-60
 Identities = 91/260 (35%), Positives = 130/260 (50%), Gaps = 17/260 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFFC- 71
             L G+VAL+TG + GIG +        GA V I     +   + +   +G         
Sbjct: 1   MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAV 60

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             DV+  E V  AVD    +FG +DI+VNNAGI+       +      ++++V D N+ G
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNL---LMRMKEEDWDRVIDTNLTG 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           VF+  K  AR M+ Q  G II+I SV G +G  G   Y  SK  V+G  K++A EL   G
Sbjct: 118 VFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRG 177

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V+P  + T +  A LPE+ +  +A++             G      ++A+AV FL
Sbjct: 178 ITVNAVAPGFIETDMTDA-LPEDVK--EAILA-----QIPLGRLG---QPEEIASAVAFL 226

Query: 251 ASDEARYISGTNLMVDGGFT 270
           ASDEA YI+G  L V+GG  
Sbjct: 227 ASDEAAYITGQTLHVNGGMV 246

Length = 248

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  186 bits (474), Expect = 2e-58
 Identities = 100/254 (39%), Positives = 136/254 (53%), Gaps = 10/254 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VA++TG  +G GE   R F + GA+V IAD+  +  ++V   +G          D
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIG--EAAIAIQAD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VTK  DV + V+  + KFG LDI+VNNAGI+    P + E D  EF++VF +NVK ++  
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKP-MLEVDEEEFDRVFAVNVKSIYLS 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +     M  Q  G II+I S AG     G   Y  SK  V+   K +A EL    IRVN
Sbjct: 119 AQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVN 178

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           C+ P A  T L    + E+  T +    FR  +       G   T +D+ANA L+LASDE
Sbjct: 179 CLCPVAGETPLLSMFMGED--TPENRAKFRATIP-----LGRLSTPDDIANAALYLASDE 231

Query: 255 ARYISGTNLMVDGG 268
           A +I+G  L VDGG
Sbjct: 232 ASFITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  186 bits (474), Expect = 3e-58
 Identities = 91/259 (35%), Positives = 120/259 (46%), Gaps = 14/259 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH- 72
           + L GRVAL+TG A GIG +        GA+V + D+  +      + +           
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV     + +AV   VE FG LDI+V NAGI     P   E D  ++E+V D+N+ G F
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFP-LTP-FAEMDDEQWERVIDVNLTGTF 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              + A   +I    G I+   SVAG   G  G   Y  SK  ++G  + +A EL    I
Sbjct: 120 LLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNI 179

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN V P  V T     +L + +  E             A   G      D+A AVLFLA
Sbjct: 180 TVNSVHPGGVDTP-MAGNLGDAQWAEAIA---------AAIPLGRLGEPEDIAAAVLFLA 229

Query: 252 SDEARYISGTNLMVDGGFT 270
           SDEARYI+G  L VDGG T
Sbjct: 230 SDEARYITGQTLPVDGGAT 248

Length = 251

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  186 bits (473), Expect = 3e-58
 Identities = 96/263 (36%), Positives = 133/263 (50%), Gaps = 20/263 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDTF 69
            L G+VAL+TG ++GIG +  R   + GA+V +A  +             +  GG     
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGG-RAA 60

Query: 70  FCHCDVT-KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
               DV+  EE V + V    E+FG +DI+VNNAGI+G   P + E    ++++V D+N+
Sbjct: 61  AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAP-LEELTEEDWDRVIDVNL 119

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G F   + A  +M    K  I++I SVAG  G  G  AY  SK A++GL K +A EL  
Sbjct: 120 LGAFLLTRAALPLMK---KQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAP 176

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIRVN V+P  + T +  A L   E      +  R  + R         T  +VA AV 
Sbjct: 177 RGIRVNAVAPGYIDTPM-TAALESAELEALKRLAARIPLGRLG-------TPEEVAAAVA 228

Query: 249 FLASD-EARYISGTNLMVDGGFT 270
           FLASD  A YI+G  L VDGG  
Sbjct: 229 FLASDEAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  180 bits (459), Expect = 7e-56
 Identities = 98/267 (36%), Positives = 135/267 (50%), Gaps = 22/267 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-C 73
            L G+VAL+TG A+GIG        K GAKV IAD+ D       ++L            
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DVT EE + + +D  VE FG +DI+VNNAGI   AP   I +    +++K+  I + G F
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAP---IEDFPTEKWKKMIAIMLDGAF 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K A  IM  Q  G II++ SV G +G  G  AY  +KH ++GL K VA E   +G+ 
Sbjct: 118 LTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVT 177

Query: 193 VNCVSPYAVATGL------ALAH---LPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
           VN + P  V T L       LA    + EEE  ED ++            Q    T  ++
Sbjct: 178 VNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLV--------PQKRFTTVEEI 229

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
           A+  LFLAS  A+ ++G   +VDGG+T
Sbjct: 230 ADYALFLASFAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  177 bits (451), Expect = 6e-55
 Identities = 92/252 (36%), Positives = 131/252 (51%), Gaps = 19/252 (7%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSL---GGEPDTFFCHCDVT 76
           AL+TG + GIG +      K GAKV I     +   ++V + L   G +       CDV+
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGV--VCDVS 58

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             EDV + V+   E+ G +DI+VNNAGI+      +R  +  +++ V D N+ GVF+  +
Sbjct: 59  DREDVKAVVEEIEEELGPIDILVNNAGIT-RDNLLMRMKE-EDWDAVIDTNLTGVFNLTQ 116

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
              RIMI Q  G II+I SV G +G  G   Y  SK  V+G  K++A EL    I VN V
Sbjct: 117 AVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAV 176

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           +P  + T +    L E+   +  ++           + G   T  +VANAV FLASDEA 
Sbjct: 177 APGFIDTDMT-DKLSEK--VKKKILS-------QIPL-GRFGTPEEVANAVAFLASDEAS 225

Query: 257 YISGTNLMVDGG 268
           YI+G  + VDGG
Sbjct: 226 YITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  176 bits (447), Expect = 2e-54
 Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 12/257 (4%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF-FCHCD 74
           L G+VAL+TG + GIG        + GA + I    +   ++  Q +  E        CD
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+ EE + +AV+   E FG +DI+VNNAGI         E   +E+  V D+N+ GVF  
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRH--PAEEFPEAEWRDVIDVNLNGVFFV 120

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +  AR MI Q  G II+ICS+   +GG    AY  SK  V GL K +A E  ++GI+VN
Sbjct: 121 SQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVN 180

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            ++P   AT +  A + + E  +D  +  R    R    +       D+  A +FLASD 
Sbjct: 181 AIAPGYFATEMTEAVVADPEFNDD--ILKRIPAGRWGQPE-------DLVGAAVFLASDA 231

Query: 255 ARYISGTNLMVDGGFTS 271
           + Y++G  + VDGG+ +
Sbjct: 232 SDYVNGQIIFVDGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  173 bits (441), Expect = 2e-53
 Identities = 88/257 (34%), Positives = 129/257 (50%), Gaps = 26/257 (10%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-HCDVTK 77
           +VAL+TG + GIG +        GAKV + D  +    +  + +            DV+ 
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVKGVF 132
            E V + V+    +FG +DI+VNNAGI+       R+  L      +++ V ++N+ GVF
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGIT-------RDNLLMRMSEEDWDAVINVNLTGVF 113

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +  +   R MI +  G II+I SV G IG  G   Y  SK  V+G  K++A EL   GI 
Sbjct: 114 NVTQAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGIT 173

Query: 193 VNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           VN V+P  + T +  A LPE+ + +    +             G   T  +VANAV FLA
Sbjct: 174 VNAVAPGFIDTDMTDA-LPEKVKEKILKQIPLGRL--------G---TPEEVANAVAFLA 221

Query: 252 SDEARYISGTNLMVDGG 268
           SD+A YI+G  L V+GG
Sbjct: 222 SDDASYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  172 bits (439), Expect = 5e-53
 Identities = 92/266 (34%), Positives = 129/266 (48%), Gaps = 29/266 (10%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQ---SLGGEPDTFFCHC 73
            +VA+ITG A GIG +        G  + +AD+  +   +   Q     G   +      
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGY--NAVAVGA 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVF 132
           DVT ++DV + +D  VEKFG+ D+MVNNAGI+   P   I E D    +KV+ +NV GV 
Sbjct: 60  DVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEED---LKKVYAVNVFGVL 116

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            G++ AAR        G II+  S+AG  G     AY+ SK AV GL +  A EL   GI
Sbjct: 117 FGIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGI 176

Query: 192 RVNCVSPYAVATGL---------ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
            VN  +P  V T +          +A  PE E             + +  + G      D
Sbjct: 177 TVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFA--------EFSSSIPL-GRLSEPED 227

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           VA  V FLAS+++ YI+G  ++VDGG
Sbjct: 228 VAGLVSFLASEDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  172 bits (438), Expect = 7e-53
 Identities = 92/262 (35%), Positives = 133/262 (50%), Gaps = 17/262 (6%)

Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
            QRL GRVA+ITGG +GIG +T R     GA V + D+    G+     +GG     F  
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGL----FVP 57

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT E+ V +  D   E +G++DI  NNAGIS      I    L  +++V D+N+  V+
Sbjct: 58  TDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVY 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGI 191
              K A   M+ Q KG+II+  S    +G      +YT SK  VL +++ +  +  + GI
Sbjct: 118 LCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGI 177

Query: 192 RVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           RVN + P  V T L L  L   + ER    +V     + R A          ++A AV F
Sbjct: 178 RVNALCPGPVNTPL-LQELFAKDPERAARRLVHVP--MGRFAE-------PEEIAAAVAF 227

Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LASD+A +I+ +  +VDGG + 
Sbjct: 228 LASDDASFITASTFLVDGGISG 249

Length = 255

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  181 bits (461), Expect = 2e-52
 Identities = 97/266 (36%), Positives = 128/266 (48%), Gaps = 24/266 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG A GIG++T +     GA V +AD+ +   +     LGG        CDV
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDV 479

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T E  V +A +     FG +DI+V+NAGI  A    I E    ++ + FD+N  G F   
Sbjct: 480 TDEAAVQAAFEEAALAFGGVDIVVSNAGI--AISGPIEETSDEDWRRSFDVNATGHFLVA 537

Query: 136 KHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           + A RIM  Q   G+I+ I S      G    AY  +K A L L + +A ELG  GIRVN
Sbjct: 538 REAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVN 597

Query: 195 CVSPYAVATGLAL----------AH--LPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
            V+P AV  G  +          A   L EEE  E              N+   E+T  D
Sbjct: 598 GVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRAR---------NLLKREVTPED 648

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           VA AV+FLAS      +G  + VDGG
Sbjct: 649 VAEAVVFLASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  169 bits (431), Expect = 6e-52
 Identities = 97/271 (35%), Positives = 142/271 (52%), Gaps = 19/271 (7%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+++   D +     L G+VA++TGGA+GIG +   LF   GA+V + D  ++   +V  
Sbjct: 1   MTDTKQFDLA---FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED-VAEVAA 56

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSE 119
            L G  +     CDV+  + V +AV   +  FG +DI+VN+AG++  AP  D+ E D   
Sbjct: 57  QLLGG-NAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEED--- 112

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           ++K  DIN+KG F   +   R MI    G I+++ S AG +      AY  SK  V+G+ 
Sbjct: 113 WDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMT 172

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           K +A E G YGI VN +SP  V T L             A  G +   A+     G    
Sbjct: 173 KVLALEWGPYGITVNAISPTVVLTELGKK----------AWAGEKGERAKKLIPAGRFAY 222

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             ++A A LFLASD A  I+G NL++DGG+T
Sbjct: 223 PEEIAAAALFLASDAAAMITGENLVIDGGYT 253

Length = 255

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  168 bits (428), Expect = 2e-51
 Identities = 87/263 (33%), Positives = 135/263 (51%), Gaps = 24/263 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFF 70
           L G+VAL+TG ++GIG++        GA V +      D  + + +++ +++GG+     
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEI-KAVGGK--AIA 57

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV+KEEDV +     +++FGTLDI+VNNAG+ G       E  L ++ KV D+N+ G
Sbjct: 58  VQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQG-DAS-SHEMTLEDWNKVIDVNLTG 115

Query: 131 VFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            F   + A +     + KG II++ SV   I   G   Y  SK  V  + K +A E    
Sbjct: 116 QFLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPK 175

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTED--AMVGFRNFVARNANMQGTELTANDVANAV 247
           GIRVN ++P A+ T +      + E+  D  +++             G      ++A A 
Sbjct: 176 GIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRI--------G---EPEEIAAAA 224

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            +LASDEA Y++GT L VDGG T
Sbjct: 225 AWLASDEASYVTGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  165 bits (420), Expect = 3e-50
 Identities = 96/259 (37%), Positives = 133/259 (51%), Gaps = 11/259 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL GRVA++TG  +GIG +T +LF + GA+V +AD      ++V  ++      F    
Sbjct: 1   MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQG 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVF 132
           DV   E V + VD    ++G LD++VNNAG   G       EAD   ++ V  +NV GVF
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEAD---WDAVMRVNVGGVF 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K+A  IM  Q  G+I++  S     GG G  AY  SK A+  L + +A +    GIR
Sbjct: 118 LWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIR 177

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-NMQGTELTANDVANAVLFLA 251
           VN V+P  + T             E      R   AR+  N  G   TA +VA A LFLA
Sbjct: 178 VNAVAPGTIDTPYFRRIFARHADPEALREALR---ARHPMNRFG---TAEEVAQAALFLA 231

Query: 252 SDEARYISGTNLMVDGGFT 270
           SDE+ + +GT L+VDGG+ 
Sbjct: 232 SDESSFATGTTLVVDGGWL 250

Length = 252

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  164 bits (418), Expect = 7e-50
 Identities = 98/263 (37%), Positives = 136/263 (51%), Gaps = 26/263 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDV 75
           +VAL+TGGA GIG+       K G  V +AD+ +   ++  + +   GG+        DV
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGK--AVAYKLDV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + ++ V SA+D   EKFG  D+MVNNAG+  AP   I E    E +KV+++NVKGV  G+
Sbjct: 59  SDKDQVFSAIDQAAEKFGGFDVMVNNAGV--APITPILEITEEELKKVYNVNVKGVLFGI 116

Query: 136 KHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           + AAR    Q   G II+  S+AG  G     AY+ +K AV GL +  A EL   GI VN
Sbjct: 117 QAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVN 176

Query: 195 CVSPYAVATGL---------ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
              P  V T +          +A  P  E       GF  F +  A   G      DVA 
Sbjct: 177 AYCPGIVKTPMWEEIDEETSEIAGKPIGE-------GFEEFSSEIA--LGRPSEPEDVAG 227

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
            V FLAS+++ YI+G +++VDGG
Sbjct: 228 LVSFLASEDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  165 bits (419), Expect = 7e-50
 Identities = 92/276 (33%), Positives = 134/276 (48%), Gaps = 39/276 (14%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G++ ++TGG++GIG + V+    +GA V  AD+    GQ          +  F   DV
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISG--------APCPDIREADLSEFEKVFDIN 127
           +  E+V   V   +EKFG +D +VNNAGI+          P     E + + F+K+F+IN
Sbjct: 59  SSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGK-YELNEAAFDKMFNIN 117

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            KGVF   +  AR M+ Q  G I+++ S AG  G  G   Y  +K A+    ++ A ELG
Sbjct: 118 QKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELG 177

Query: 188 KYGIRVNCVSPYAV-ATGLALAHLPEEERT---EDAMVGFRNFVAR--NANMQGTELTA- 240
           K+ IRV  V+P  + ATGL         RT   E+A+   R        A    T     
Sbjct: 178 KHNIRVVGVAPGILEATGL---------RTPEYEEALAYTRGITVEQLRAGYTKTSTIPL 228

Query: 241 ------NDVANAVLFLASDEARYISGTNLMVDGGFT 270
                 ++VA+ V +L SD A YI+G    + GG T
Sbjct: 229 GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  164 bits (417), Expect = 9e-50
 Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 15/240 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L G+VALITG ++GIGE+T R   + GAKV +A  ++   + +   +G          
Sbjct: 2   TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIG--AGAALALA 59

Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT    V +A++   E+FG +DI+VNNAG+  A    + EADL +++++ D NVKG+ 
Sbjct: 60  LDVTDRAAVEAAIEALPEEFGRIDILVNNAGL--ALGDPLDEADLDDWDRMIDTNVKGLL 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +G +     M+ +  G II++ S+AG     G   Y  +K AV   +  +  EL   GIR
Sbjct: 118 NGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIR 177

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           V  +SP  V T    + +  E   E          A      GT LT  D+A AVLF A+
Sbjct: 178 VTVISPGLVETTE-FSTVRFEGDDER---------ADKVYKGGTALTPEDIAEAVLFAAT 227

Length = 246

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  162 bits (412), Expect = 7e-49
 Identities = 88/267 (32%), Positives = 124/267 (46%), Gaps = 27/267 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFFCHCD 74
           L G   L+TGGA+GIG +    F + GA+V + DV +  L      +            D
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAA--TAARLPGAKVTATVAD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS--EFEKVFDINVKGVF 132
           V     V    D  VE+FG LD++VNNAGI+G   P     +++  ++E+   +N+ G F
Sbjct: 67  VADPAQVERVFDTAVERFGGLDVLVNNAGIAG---PTGGIDEITPEQWEQTLAVNLNGQF 123

Query: 133 HGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           +  + A  ++     G  II++ SVAG +G  G   Y  SK AV+GL K++A ELG  GI
Sbjct: 124 YFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGI 183

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL---------TAND 242
           RVN + P  V         P   R  +A             M+   L            D
Sbjct: 184 RVNAILPGIVRG-------PRMRRVIEARAQQLGIGL--DEMEQEYLEKISLGRMVEPED 234

Query: 243 VANAVLFLASDEARYISGTNLMVDGGF 269
           +A   LFLAS  ARYI+G  + VDG  
Sbjct: 235 IAATALFLASPAARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  160 bits (407), Expect = 2e-48
 Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 7/253 (2%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDN---LGQQVCQSLGGEPDTFFCHCDV 75
           +V LITGG +G+G +T     K GAK+ + D+ +      +     +  + +      DV
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADV 63

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + E  V + VD TVE+FG +D   NNAGI G       +    EF+KV  IN++GVF+G+
Sbjct: 64  SDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNL-TEDFGADEFDKVVSINLRGVFYGL 122

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +   ++M  Q  G I++  SV G  G      Y  +KH V+GL +N A E G+YGIR+N 
Sbjct: 123 EKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINA 182

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P A+ T +    L ++   E+       FV+ N   +  E    +VA  V FL SD+A
Sbjct: 183 IAPGAILTPMVEGSL-KQLGPENPEEAGEEFVSVNPMKRFGE--PEEVAAVVAFLLSDDA 239

Query: 256 RYISGTNLMVDGG 268
            Y++   + +DGG
Sbjct: 240 GYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  159 bits (405), Expect = 5e-48
 Identities = 95/253 (37%), Positives = 137/253 (54%), Gaps = 7/253 (2%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VA++TG   GIG +      + GA+V +AD+     Q V   + G         DV
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALA--LRVDV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T E+ V +  +  VE+FG LD++VNNAG      P I + DL+ +++   IN++G F   
Sbjct: 59  TDEQQVAALFERAVEEFGGLDLLVNNAGAMHL-TPAIIDTDLAVWDQTMAINLRGTFLCC 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +HAA  MI +  G+I+++ S+AG  G  G  AY  SK A+  L + +AAEL   GIR N 
Sbjct: 118 RHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNA 177

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  + T L LA L   E       GF   + +   +QG      DVA AV+FL SD+A
Sbjct: 178 LAPGLIDTPLLLAKLAGFEGALGPG-GFHLLIHQ---LQGRLGRPEDVAAAVVFLLSDDA 233

Query: 256 RYISGTNLMVDGG 268
            +I+G  L VDGG
Sbjct: 234 SFITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  158 bits (403), Expect = 1e-47
 Identities = 82/259 (31%), Positives = 122/259 (47%), Gaps = 21/259 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L G+ AL+TG A G+G +      + GA V   D      +++  +L   GG        
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG--RAHAIA 62

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+     V    D      G LD +VNNAGI         E D+  ++ V ++NV+G F
Sbjct: 63  ADLADPASVQRFFDAAAAALGGLDGLVNNAGI--TNSKSATELDIDTWDAVMNVNVRGTF 120

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++ A   +    +G I+++ S     G     AY  SK AV+G+ +++A ELG  GI 
Sbjct: 121 LMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGIT 180

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLFL 250
           VN ++P   AT  A A++P +ER            A     +        +DVA AVLFL
Sbjct: 181 VNAIAPGLTATE-ATAYVPADER-----------HAYYLKGRALERLQVPDDVAGAVLFL 228

Query: 251 ASDEARYISGTNLMVDGGF 269
            SD AR+++G  L V+GGF
Sbjct: 229 LSDAARFVTGQLLPVNGGF 247

Length = 250

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  158 bits (402), Expect = 1e-47
 Identities = 91/259 (35%), Positives = 129/259 (49%), Gaps = 18/259 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+VAL+TGGA+GIG +  +     GA V +AD+   + ++V ++  G P      CDVT 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E  V SA +  V +FG LDI+V+NAGI  A    I E  L ++ +  DIN+ G F   + 
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGI--ATSSPIAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 138 AARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           A RIM  Q   G I+   S      G    AY+ +K A   L + +A E G+ GIRVN V
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

Query: 197 SPYAVATGLAL-------AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           +P AV  G  +       A        E        +  R  N+   E+   DVA AV+ 
Sbjct: 179 NPDAVFRGSKIWEGVWRAARAKAYGLLE------EEYRTR--NLLKREVLPEDVAEAVVA 230

Query: 250 LASDEARYISGTNLMVDGG 268
           +AS++    +G  + VDGG
Sbjct: 231 MASEDFGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  157 bits (400), Expect = 3e-47
 Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 16/259 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFC 71
           L G+VA+ITG ++GIG  T  LF + GA++ +    A+  +   Q   Q+   E      
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-DLSEFEKVFDINVKG 130
             D+T+EE     +  T+ KFG LDI+VNNAGI         E  D+ E++KV ++N++ 
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGI---LAKGGGEDQDIEEYDKVMNLNLRA 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V + +   A   + +TKG I+++ SVAG     G   Y  SK A+    +  A EL   G
Sbjct: 118 VIY-LTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKG 176

Query: 191 IRVNCVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           +RVN VSP  + TG      +PEE+  +     F +  A+  +  G   T ++VA A+ F
Sbjct: 177 VRVNSVSPGVIVTGFHRRMGMPEEQYIK-----FLSR-AKETHPLGRPGTVDEVAEAIAF 230

Query: 250 LASDEARYISGTNLMVDGG 268
           LASD + +I+G  L VDGG
Sbjct: 231 LASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  157 bits (399), Expect = 4e-47
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 17/261 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCH 72
            L G+VA++TGG+ GIG +  R   + GA V I        ++  + L  +    T    
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV+ +E V        + FG +DI++ NAGI+          +  ++ KV D+N+ GVF
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYE--QWNKVIDVNLNGVF 122

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYG 190
           +  + AA+I   Q KG++I   S++G I        AY  SK AV+ L K++A E  KY 
Sbjct: 123 NCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYF 182

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN +SP  + T L      E  +  ++ +       R A          ++  A L+L
Sbjct: 183 IRVNSISPGYIDTDLTDFVDKELRKKWESYIPL----KRIA-------LPEELVGAYLYL 231

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD + Y +G++L++DGG+T 
Sbjct: 232 ASDASSYTTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  157 bits (399), Expect = 5e-47
 Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 30/274 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFFC 71
           RL G+VAL+TG A GIG +  R F + GA V +AD+   L ++   ++  +         
Sbjct: 4   RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAV 63

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKG 130
             DVT    V +AV    E FG LD++VNNAGI+    P  + + D   + + F +++ G
Sbjct: 64  PADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDED---WRRCFAVDLDG 120

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            ++G +     M+ + +G+I++I S      I G  P  Y  +KH +LGL + +  E   
Sbjct: 121 AWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFP--YPVAKHGLLGLTRALGIEYAA 178

Query: 189 YGIRVNCVSPYAVATGLALAHL-----PEEERTEDAMVGFRNFVARNANMQ--GTELTAN 241
             +RVN ++P  + T L          P   R            A    +Q         
Sbjct: 179 RNVRVNAIAPGYIETQLTEDWWNAQPDPAAAR------------AETLALQPMKRIGRPE 226

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSVNHS 275
           +VA   +FLASDEA +I+ T + +DGG + + H 
Sbjct: 227 EVAMTAVFLASDEAPFINATCITIDGGRSVLYHD 260

Length = 260

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  155 bits (395), Expect = 2e-46
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 16/261 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---NLGQQVCQSLGGEPDTFFCHCD 74
           G+ AL+TG A+GIG +  R     GA V + D  +       +V    GG         D
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYL--PAD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           VTKE+++   +     +FG LDI+VNNAGI   AP   I E    +++++  + +   FH
Sbjct: 59  VTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAP---IEEFPPEDWDRIIAVMLTSAFH 115

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            ++ A   M  Q  G II+I S  G +      AY  +KH ++GL K +A E+ ++GI V
Sbjct: 116 TIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITV 175

Query: 194 NCVSPYAVATGLALAHLPEEERT----EDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           N + P  V T L    + ++ +T    E+ ++     V          +T ++VA   L+
Sbjct: 176 NAICPGYVRTPLVEKQIADQAKTRGIPEEQVI---REVMLKGQPTKRFVTVDEVAETALY 232

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD A  I+G  +++DGG+T
Sbjct: 233 LASDAAAQITGQAIVLDGGWT 253

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  155 bits (394), Expect = 3e-46
 Identities = 91/264 (34%), Positives = 138/264 (52%), Gaps = 29/264 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFC 71
           L G+VA ITGG TGIG++  + F + GA V IA    +V +   +++  + GG       
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGR-----A 55

Query: 72  H---CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDI 126
           H   CDV   E V +AVD T+++FG +DI++NNA       P      LS   F+ V DI
Sbjct: 56  HPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAA-GNFLAP---AESLSPNGFKTVIDI 111

Query: 127 NVKGVFHGMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGS-KHAVLGLNKNVAA 184
           ++ G F+  K    R++  +  G+I++I S   A  G     ++ + K  V  L +++A 
Sbjct: 112 DLNGTFNTTKAVGKRLIEAKHGGSILNI-SATYAYTGSPFQVHSAAAKAGVDALTRSLAV 170

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E G YGIRVN ++P  + T   +  L    ++E  M+  R  + R    +       ++A
Sbjct: 171 EWGPYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIE-RVPLGRLGTPE-------EIA 222

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           N  LFL SD A YI+GT L+VDGG
Sbjct: 223 NLALFLLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  154 bits (391), Expect = 8e-46
 Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 33/271 (12%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVC--QSLGGEPDTFFC 71
            L G+ AL+TGG+ G+G        + GA+V + A   + L +     ++LG +      
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWI-- 66

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             DV  E D+    + T+E+FG +DI+VNNAG + GAP  D     +  ++KV ++NV+G
Sbjct: 67  AADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDH---PVEAWDKVMNLNVRG 123

Query: 131 VFHGMKHAARI-MIPQTKGTIISICSVAGAIGG----LGPHAYTGSKHAVLGLNKNVAAE 185
           +F   +  A+  MIP+  G II++ SVAG  G     +   AY  SK AV+   + +AAE
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAE 183

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAN 241
            G +GIRVN ++P    T +    L   ER  + +            +  T L       
Sbjct: 184 WGPHGIRVNAIAPGFFPTKMTRGTL---ERLGEDL------------LAHTPLGRLGDDE 228

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           D+  A L LASD +++I+G  L VDGG ++V
Sbjct: 229 DLKGAALLLASDASKHITGQILAVDGGVSAV 259

Length = 259

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  153 bits (389), Expect = 2e-45
 Identities = 86/271 (31%), Positives = 128/271 (47%), Gaps = 35/271 (12%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VAL+TG A+GIGE+    +   GA+V IAD++    +     +G  P       
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG--PAAIAVSL 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVF 132
           DVT+++ +   V   VE+FG +DI+ NNA +   AP  DI       ++++F +NVKG+F
Sbjct: 60  DVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDS---YDRLFAVNVKGLF 116

Query: 133 HGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             M+  AR M+ Q +G  II++ S AG  G      Y  +K AV+   ++ A  L ++GI
Sbjct: 117 FLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGI 176

Query: 192 RVNCVSPYAVAT--------------GLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
            VN ++P  V T                      E++R     V             G  
Sbjct: 177 NVNAIAPGVVDTPMWDQVDALFARYENRPPG---EKKRLVGEAVPL-----------GRM 222

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGG 268
              +D+    LFLAS +A YI      VDGG
Sbjct: 223 GVPDDLTGMALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  150 bits (380), Expect = 3e-44
 Identities = 85/261 (32%), Positives = 128/261 (49%), Gaps = 20/261 (7%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLG---GEPDTFFCHCDVT 76
           A ITG A G+G +  R   + GAKV + D+ D  G       +    GE   F    DVT
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E    + +    +  G L ++VNNAG+       I + +L E+ +V  INV+ +F G K
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSFG--AIEQIELDEWRRVMAINVESIFLGCK 119

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGIRVN 194
           HA   +      +I++I SVA         AY  SK AV  L K++A +  +    +R N
Sbjct: 120 HALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCN 179

Query: 195 CVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            + P  + TG+       L EEE T          +AR   + G     +DVA+AVL+LA
Sbjct: 180 SIHPTFIRTGIVDPIFQRLGEEEATRK--------LARGVPL-GRLGEPDDVAHAVLYLA 230

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SDE+R+++G  L++DGG  ++
Sbjct: 231 SDESRFVTGAELVIDGGICAM 251

Length = 251

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  149 bits (377), Expect = 5e-44
 Identities = 84/255 (32%), Positives = 123/255 (48%), Gaps = 19/255 (7%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           AL+TGG+ GIG++      + GA V I      D    +  +  + LGG         DV
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAE-IEELGG--KAVVVRADV 57

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           ++ +DV        E+FG LD++V+NA         + E   + ++   + N+K + H  
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAAG--AFRPLSELTPAHWDAKMNTNLKALVHCA 115

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + AA++M  +  G I++I S+          A   +K A+  L + +A ELG  GIRVN 
Sbjct: 116 QQAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNA 175

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           VSP  + T  ALAH P  E   +A        A      G   T  DVA+AV FL SD A
Sbjct: 176 VSPGVIDTD-ALAHFPNREDLLEA--------AAANTPAGRVGTPQDVADAVGFLCSDAA 226

Query: 256 RYISGTNLMVDGGFT 270
           R I+G  L+VDGG +
Sbjct: 227 RMITGQTLVVDGGLS 241

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  149 bits (377), Expect = 9e-44
 Identities = 89/270 (32%), Positives = 123/270 (45%), Gaps = 24/270 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD-------- 67
           L G+VA ITG A G G +        GA +   D+   L       L    D        
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 68  ------TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
                       DV    +V + V+  VE+FG LD++V NAG+         E    +++
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYG--RSWELSEEQWD 118

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            V DIN+ GV+   K     MI +  G +II   SVAG     G   Y  +KH ++GL K
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTK 178

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTEL 238
            +A EL +YGIRVN + PY+V T +        E   +A + +         A      +
Sbjct: 179 TLANELAEYGIRVNSIHPYSVDTPMI-----APEAMREAFLKYPEAARAFMPALPVSGFV 233

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
              DVA+AVL+LASDE+RYI+G  L VD G
Sbjct: 234 PPEDVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  148 bits (375), Expect = 2e-43
 Identities = 86/259 (33%), Positives = 124/259 (47%), Gaps = 16/259 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVT 76
            +VAL+TG   GIG +  +   + G KV I D  +   Q     L  +         DV+
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             + V +AV   V+ FG L+++VNNAG+  AP   I      +F+KV++INV GV  G++
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGV--APTTPIETITEEQFDKVYNINVGGVIWGIQ 119

Query: 137 HAARIMIPQTK-----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            A        K     G II+  S AG +G      Y+ +K AV GL +  A +L   GI
Sbjct: 120 AA----QEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGI 175

Query: 192 RVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            VN  +P  V T +   +AH   E   +    G   F       + +E    DVAN V F
Sbjct: 176 TVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSE--PEDVANCVSF 233

Query: 250 LASDEARYISGTNLMVDGG 268
           LA  ++ YI+G  ++VDGG
Sbjct: 234 LAGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  147 bits (374), Expect = 2e-43
 Identities = 77/210 (36%), Positives = 113/210 (53%), Gaps = 16/210 (7%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G VA++TGGA+G+G +TV      GAKV I D+ ++ G+ V        +  F   DVT 
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETV---AKLGDNCRFVPVDVTS 58

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI-----READLSEFEKVFDINVKGVF 132
           E+DV +A+ L   KFG LDI+VN AGI+ A          +   L  F++V ++N+ G F
Sbjct: 59  EKDVKAALALAKAKFGRLDIVVNCAGIAVA-AKTYNKKGQQPHSLELFQRVINVNLIGTF 117

Query: 133 HGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           + ++ AA  M          +G II+  SVA   G +G  AY+ SK  ++G+   +A +L
Sbjct: 118 NVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDL 177

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERT 216
              GIRV  ++P    T L LA LPE+ R 
Sbjct: 178 APQGIRVVTIAPGLFDTPL-LAGLPEKVRD 206

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  147 bits (373), Expect = 4e-43
 Identities = 92/269 (34%), Positives = 125/269 (46%), Gaps = 28/269 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD--------VQDNLGQQVCQSLGGEP 66
            L G+VALITGG +GIG + V  F   GA+V + +        ++   G  V    G   
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEG--- 59

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSE-FEKV 123
                  DVT   D   AVD TV+ FG LD  V NAGI        DI    L   F+++
Sbjct: 60  -------DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEI 112

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNV 182
           F++NVKG   G K A   +   + G++I   S +    GG GP  YT SKHAV+GL + +
Sbjct: 113 FNVNVKGYLLGAKAALPALK-ASGGSMIFTLSNSSFYPGGGGP-LYTASKHAVVGLVRQL 170

Query: 183 AAELGKYGIRVNCVSPYAVATGLA-LAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           A EL    IRVN V+P    T L   A L + E +     G  + +A    +Q       
Sbjct: 171 AYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFA-PQPE 228

Query: 242 DVANAVLFLASDE-ARYISGTNLMVDGGF 269
           D     + LAS   +R ++G  +  DGG 
Sbjct: 229 DHTGPYVLLASRRNSRALTGVVINADGGL 257

Length = 263

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  146 bits (371), Expect = 6e-43
 Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 20/262 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ----QVCQSLGGEPDTFF 70
            L G+VA +TG  +GIG+       + GA V + D++ + G     +  ++ G       
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRR--AIQ 62

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT + D+ +AV  T  + G L + VN AGI+ A   +  E +  +++ V DIN+ G
Sbjct: 63  IAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAE--EMEEEQWQTVMDINLTG 120

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAI--GGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           VF   +  AR M+    G+I++I S++G I   GL    Y  SK  V+ L+K++A E   
Sbjct: 121 VFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVG 180

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIRVN +SP   AT       P   R E  MV           MQ      +++    +
Sbjct: 181 RGIRVNSISPGYTAT-------PMNTRPE--MVHQTKLFEEQTPMQRMA-KVDEMVGPAV 230

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FL SD A + +G +L+VDGGF 
Sbjct: 231 FLLSDAASFCTGVDLLVDGGFV 252

Length = 254

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  145 bits (369), Expect = 9e-43
 Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 24/257 (9%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           Q  + +  LITG A+GIG +  R F   GA+V   D QD                F    
Sbjct: 1   QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS---------GNF---- 47

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
               + D+   ++   +   ++DI+ N AGI     P + +  L E++ +FD N+   F 
Sbjct: 48  -HFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYKP-LLDTSLEEWQHIFDTNLTSTFL 105

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +     M+ +  G II++CS+A  + G G  AYT SKHA+ G  K +A +  K GI+V
Sbjct: 106 LTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQV 165

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             ++P AV T +  A        E    G  ++VAR   +        +VA   LFLAS 
Sbjct: 166 FGIAPGAVKTPMTAADF------EPG--GLADWVARETPI-KRWAEPEEVAELTLFLASG 216

Query: 254 EARYISGTNLMVDGGFT 270
           +A Y+ GT + +DGG+T
Sbjct: 217 KADYMQGTIVPIDGGWT 233

Length = 235

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  146 bits (370), Expect = 9e-43
 Identities = 73/274 (26%), Positives = 119/274 (43%), Gaps = 43/274 (15%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCD 74
            +VA++ GG   +G        + G +V +AD+       V Q +    GE   +    D
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            T E+ V +      E FG +D++V NAGI+ A    I +  L +F++   +N+ G F  
Sbjct: 62  ATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLC 119

Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  +R+MI    +G II I S +G +G      Y+ +K   +GL +++A +L +YGI V
Sbjct: 120 AREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITV 179

Query: 194 NCV-------SP--------YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
           + +       SP        YA   G     +  +E                  +    L
Sbjct: 180 HSLMLGNLLKSPMFQSLLPQYAKKLG-----IKPDE-------------VEQYYIDKVPL 221

Query: 239 ----TANDVANAVLFLASDEARYISGTNLMVDGG 268
                  DV N +LF AS +A Y +G ++ V GG
Sbjct: 222 KRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  146 bits (370), Expect = 1e-42
 Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 20/261 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCH 72
           R   +V ++TGG+ GIG   VR F ++GAKV      +  GQ +   L   G     F  
Sbjct: 6   RYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVP 65

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDVTKEED+ + + +TVE+FG +D +VNNAG          E    EF  + ++N+   F
Sbjct: 66  CDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQT-TDETSAQEFRDLLNLNLISYF 124

Query: 133 HGMKHAARIMIP---QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
              K+A    +P   +++G II++ S+ G+IG      Y  +K A+  + K +A +  +Y
Sbjct: 125 LASKYA----LPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRY 180

Query: 190 GIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           G+RVNC+SP  + T L   LA       T D +   +      A + G   T  +   A 
Sbjct: 181 GVRVNCISPGNIWTPLWEELAAQ-----TPDTLATIKE--GELAQLLGRMGTEAESGLAA 233

Query: 248 LFLASDEARYISGTNLMVDGG 268
           LFLA+ EA + +G +L++ GG
Sbjct: 234 LFLAA-EATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  145 bits (369), Expect = 1e-42
 Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 22/260 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFF 70
           L G+VAL+TG + GIG +  +   + GA V +         + +  ++ ++ GG      
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEI-EAAGG--KAIA 57

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV+    V    D   + FG +DI+VNNAG+     P I E    EF+++F +N KG
Sbjct: 58  VQADVSDPSQVARLFDAAEKAFGGVDILVNNAGV-MLKKP-IAETSEEEFDRMFTVNTKG 115

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F  ++ AA+ +     G II+I S   A       AY GSK AV    + +A ELG  G
Sbjct: 116 AFFVLQEAAKRLRD--GGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRG 173

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V+P  V T +  A   EE       V    +   +   +  E    D+A  V FL
Sbjct: 174 ITVNAVAPGPVDTDMFYAGKTEE------AVEG--YAKMSPLGRLGE--PEDIAPVVAFL 223

Query: 251 ASDEARYISGTNLMVDGGFT 270
           AS + R+++G  +  +GG+ 
Sbjct: 224 ASPDGRWVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  145 bits (368), Expect = 2e-42
 Identities = 89/263 (33%), Positives = 128/263 (48%), Gaps = 27/263 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--QQVCQSLGGEPDTFFCH 72
            L G+VA++TGG TG+G+       K GA + I     N    +++ +  G +    F  
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRK--VTFVQ 69

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGV 131
            D+TK E     V   +E+FG +DI+VNNAG I  AP  + ++ D   +  V DIN+  V
Sbjct: 70  VDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDED---WNAVMDINLNSV 126

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           +H  +  A++M  Q  G II+I S+    GG    AYT SKH V GL K  A EL  Y I
Sbjct: 127 YHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNI 186

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ-----GTELTANDVANA 246
           +VN ++P  + T            T       R    RN  +      G     +D+  A
Sbjct: 187 QVNAIAPGYIKT----------ANTAP----IRADKNRNDEILKRIPAGRWGEPDDLMGA 232

Query: 247 VLFLASDEARYISGTNLMVDGGF 269
            +FLAS  + Y++G  L VDGG+
Sbjct: 233 AVFLASRASDYVNGHILAVDGGW 255

Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  144 bits (366), Expect = 3e-42
 Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 27/263 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L  +VA++TGG+ GIG++ V    + G+ V   D+++              D  +   DV
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP----------SYNDVDYFKVDV 53

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           + +E V   +D  + K+G +DI+VNNAGI S      I   +  E++++ ++NV G+F  
Sbjct: 54  SNKEQVIKGIDYVISKYGRIDILVNNAGIESYGA---IHAVEEDEWDRIINVNVNGIFLM 110

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K+    M+ Q KG II+I SV          AY  SKHAVLGL +++A +     IR  
Sbjct: 111 SKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCV 169

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL------TANDVANAVL 248
            V P ++ T L L    E E  +D        V R     G            +VA  V 
Sbjct: 170 AVCPGSIRTPL-LEWAAELEVGKDPEH-----VERKIREWGEMHPMKRVGKPEEVAYVVA 223

Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FLASD A +I+G  + VDGG  +
Sbjct: 224 FLASDLASFITGECVTVDGGLRA 246

Length = 258

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  143 bits (362), Expect = 1e-41
 Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 30/259 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTK 77
           +VA+ITGGA+GIG +T +L  K GAKV I D  +N G     Q++  +    F  CDVT 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            E + +A    +EKFG +DI++NNAGI               +EK  D+N+ GV +    
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 138 AARIM---IPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKNVAAEL-GKY 189
           A   M        G I++I SVA    GL P      Y+ SKH V+G  +++A  L  K 
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVA----GLYPAPQFPVYSASKHGVVGFTRSLADLLEYKT 176

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+RVN + P    T L    LP+    E  M+        +A  Q  E     VA A+++
Sbjct: 177 GVRVNAICPGFTNTPL----LPDLVAKEAEML-------PSAPTQSPE----VVAKAIVY 221

Query: 250 LASDEARYISGTNLMVDGG 268
           L  D+ +  +G   +VDGG
Sbjct: 222 LIEDDEK--NGAIWIVDGG 238

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  148 bits (376), Expect = 2e-41
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 15/272 (5%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           S +   SP  +    RV  ITGGA GIG +    F   G ++ I D      +++ ++LG
Sbjct: 257 STAQAPSPLAES--PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG 314

Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
            E  +     D+T E  V SA      ++G LD++VNNAGI+    P + ++   +F +V
Sbjct: 315 DEHLSV--QADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQS-AEDFTRV 371

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
           +D+N+ G F   + AAR+M     G I+++ S+A  +     +AY  SK AV  L++++A
Sbjct: 372 YDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLA 429

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E    GIRVN V+P  + T   LA         D++   R  + R  +         +V
Sbjct: 430 CEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRR-RIPLGRLGD-------PEEV 481

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFTSVNHS 275
           A A+ FLAS  A Y++G  L VDGG+T+   +
Sbjct: 482 AEAIAFLASPAASYVNGATLTVDGGWTAFGDA 513

Length = 520

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  142 bits (359), Expect = 3e-41
 Identities = 91/253 (35%), Positives = 124/253 (49%), Gaps = 18/253 (7%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFCHCDVT 76
           VA++TGGA GIG++      K GA V IAD++    + V    Q  GG+       C+VT
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQ--AIGLECNVT 58

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E+D+ + V  TV +FG + I+VNNAG  G P P        +FE  F +N+   F   +
Sbjct: 59  SEQDLEAVVKATVSQFGGITILVNNAG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQ 117

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
             A  M     G I++I S++     +   AY  SK AV  + +N+A +LG  GIRVN V
Sbjct: 118 LCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAV 177

Query: 197 SPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           +P AV T  LA    PE ER                   G      D+ANA LFL S  +
Sbjct: 178 APGAVKTDALASVLTPEIERAMLK-----------HTPLGRLGEPEDIANAALFLCSPAS 226

Query: 256 RYISGTNLMVDGG 268
            ++SG  L V GG
Sbjct: 227 AWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  142 bits (360), Expect = 3e-41
 Identities = 95/261 (36%), Positives = 130/261 (49%), Gaps = 20/261 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQ--SLGGEPDTFF 70
            RL G+VA+ITG ++GIG +  +LF + GAKV + A  Q  L Q V +  + GGE     
Sbjct: 2   MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAV--A 59

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV  E    + V L VE+FG LDI  NNAG  G   P + E  L  + +    N+  
Sbjct: 60  LAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGP-VAEMSLEGWRETLATNLTS 118

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKY 189
            F G KH    M+ +  G++I   +  G   G  G  AY  SK  ++GL + +AAE G  
Sbjct: 119 AFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQ 178

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA--NDVANAV 247
           GIRVN + P    T +  A     E           FV   A +   +  A   ++A A 
Sbjct: 179 GIRVNALLPGGTDTPMGRAMGDTPE--------ALAFV---AGLHALKRMAQPEEIAQAA 227

Query: 248 LFLASDEARYISGTNLMVDGG 268
           LFLASD A +++GT L+VDGG
Sbjct: 228 LFLASDAASFVTGTALLVDGG 248

Length = 254

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  141 bits (357), Expect = 8e-41
 Identities = 90/254 (35%), Positives = 124/254 (48%), Gaps = 20/254 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GRV L+TGG  GIG    R F   GA V +       G++  +++ G P  F    DV
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVV------CGRRAPETVDGRPAEFHA-ADV 56

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              + V + VD  VE+ G LD++VNNAG  G+P     EA     EK+ ++N+       
Sbjct: 57  RDPDQVAALVDAIVERHGRLDVLVNNAG--GSPYALAAEASPRFHEKIVELNLLAPLLVA 114

Query: 136 KHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           + A  +M  Q   G+I++I SV+G     G  AY  +K  +L L +++A E     +RVN
Sbjct: 115 QAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP-KVRVN 173

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V    V T  +  H  + E       G    VA    + G   T  D+A A LFLASD 
Sbjct: 174 AVVVGLVRTEQSELHYGDAE-------GIAA-VAATVPL-GRLATPADIAWACLFLASDL 224

Query: 255 ARYISGTNLMVDGG 268
           A Y+SG NL V GG
Sbjct: 225 ASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  139 bits (353), Expect = 3e-40
 Identities = 82/261 (31%), Positives = 119/261 (45%), Gaps = 24/261 (9%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC-DVTKEE 79
            L+TG A GIG +  R   + GA+V   D       ++   L      F  +  DV    
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            V   V     ++G +D++VN AGI   GA    I      +++  F +N  GVF+  + 
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGILRLGA----IDSLSDEDWQATFAVNTFGVFNVSQA 116

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
            +  M  +  G I+++ S A  +  +G  AY  SK A+  L K +  EL  YGIR N VS
Sbjct: 117 VSPRMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVS 176

Query: 198 PYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLF 249
           P +  T     L      E++    +   FR          G  L      +D+ANAVLF
Sbjct: 177 PGSTDTEMQRQLWNDEYGEQQVIAGSPEQFRL---------GIPLGKIAEPSDIANAVLF 227

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD A +I+  +L+VDGG T
Sbjct: 228 LASDLASHITMHDLVVDGGAT 248

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  140 bits (355), Expect = 3e-40
 Identities = 66/193 (34%), Positives = 95/193 (49%), Gaps = 5/193 (2%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L G+V  ITGGA GIG +T R     GA+V I D+ + L ++    LG          
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLV---VGGPL 57

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT      + +D      G +D++VNNAG+   P     +   +   ++ D+NV GV  
Sbjct: 58  DVTDPASFAAFLDAVEADLGPIDVLVNNAGV--MPVGPFLDEPDAVTRRILDVNVYGVIL 115

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G K AA  M+P+ +G ++++ S+AG I   G   Y  SKHAV+G       EL   G+ V
Sbjct: 116 GSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHV 175

Query: 194 NCVSPYAVATGLA 206
           + V P  V T L 
Sbjct: 176 SVVLPSFVNTELI 188

Length = 273

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  138 bits (351), Expect = 6e-40
 Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 17/261 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFF-CHCDV 75
           G+VAL+T  ++GIG +  R   + GA+V I    ++NL ++    L            D+
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENL-ERAASELRAGGAGVLAVVADL 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  ED+   V+   + FG +DI+VNNAG  G P     E    ++ + FD+ +  V   +
Sbjct: 60  TDPEDIDRLVEKAGDAFGRVDILVNNAG--GPPPGPFAELTDEDWLEAFDLKLLSVIRIV 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M  +  G I++I S+              ++  ++GL K ++ EL   G+ VN 
Sbjct: 118 RAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNS 177

Query: 196 VSPYAVATG----LALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLF 249
           V P  + T     L  A   +E  + +        VA    +   G      ++A  + F
Sbjct: 178 VLPGYIDTERVRRLLEARAEKEGISVEE---AEKEVASQIPLGRVGK---PEELAALIAF 231

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS++A YI+G  ++VDGG T
Sbjct: 232 LASEKASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  138 bits (350), Expect = 6e-40
 Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 16/254 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+VALIT  A GIG +    F + GA V   D+ +       + L   P       DVT 
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVIATDINEEK----LKELERGPGITTRVLDVTD 57

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           +E     V    ++ G +D++ N AG        I + +  +++   ++NV+ ++  +K 
Sbjct: 58  KE----QVAALAKEEGRIDVLFNCAGF--VHHGSILDCEDDDWDFAMNLNVRSMYLMIKA 111

Query: 138 AARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               M+ +  G+II++ SVA +I G+     Y+ +K AV+GL K+VAA+  + GIR N +
Sbjct: 112 VLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAI 171

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
            P  V T      +  +   E+A    + F AR     G   T  +VA   ++LASDE+ 
Sbjct: 172 CPGTVDTPSLEERIQAQPDPEEA---LKAFAAR--QPLGRLATPEEVAALAVYLASDESA 226

Query: 257 YISGTNLMVDGGFT 270
           Y++GT +++DGG++
Sbjct: 227 YVTGTAVVIDGGWS 240

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  139 bits (351), Expect = 7e-40
 Identities = 95/266 (35%), Positives = 135/266 (50%), Gaps = 18/266 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           R  G+VALITGG  GIG +    F + GAKV +         +  +  G    T    CD
Sbjct: 4   RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVF--TI--KCD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFH 133
           V   + V  + ++  ++FG +D++VNNAGI    P     E D  ++ K+  IN+ G  +
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMP---FEEFDEEKYNKMIKINLNGAIY 116

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
                  ++     G I++I S AG IG    G   Y  +K  ++ L + +A ELGKYGI
Sbjct: 117 TTYEFLPLLKLSKNGAIVNIASNAG-IGTAAEGTTFYAITKAGIIILTRRLAFELGKYGI 175

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V+P  V T + L+   +EE  E     FRN         G      D+AN VLFLA
Sbjct: 176 RVNAVAPGWVETDMTLSGKSQEE-AEKLRELFRNKTV--LKTTGK---PEDIANIVLFLA 229

Query: 252 SDEARYISGTNLMVDGG-FTSVNHSL 276
           SD+ARYI+G  ++ DGG   ++ HSL
Sbjct: 230 SDDARYITGQVIVADGGRIDNLTHSL 255

Length = 255

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  137 bits (347), Expect = 3e-39
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 19/261 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L G++AL+TG + GIGE+  +L  + GA V ++  + +  Q V  ++   GG+ +   CH
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
             + + E + +      E+ G LDI+VNNA  +      I + DL  F+K  D+N++G F
Sbjct: 66  --IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGH-ILDTDLGAFQKTVDVNIRGYF 122

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                A ++M  Q  G+I+++ SV G   G     Y+ +K AV+ + K  A E   +GIR
Sbjct: 123 FMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIR 182

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAM--VGFRNFVARNANMQGTELTANDVANAVLFL 250
           VN + P    T  A A    +   + A+  +  R   A  + M G           VL+L
Sbjct: 183 VNALLPGLTDTKFASALFKNDAILKQALAHIPLRR-HAEPSEMAGA----------VLYL 231

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD + Y +G  L VDGG+ S
Sbjct: 232 ASDASSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  137 bits (346), Expect = 3e-39
 Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 28/262 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFC 71
           RL G+ A+ITG   GIG+     F   GA V ++D+  +    V    Q LGG+   F C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFAC 65

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CD+T E+++ +  D  + K G +DI+VNNAG  G P P   +  +++F + +++NV   
Sbjct: 66  RCDITSEQELSALADFALSKLGKVDILVNNAG-GGGPKP--FDMPMADFRRAYELNVFSF 122

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FH  +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  I
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 192 RVNCVSPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           RVN ++P A+ T  L     PE E+                 +Q T +       D+ANA
Sbjct: 183 RVNGIAPGAILTDALKSVITPEIEQ---------------KMLQHTPIRRLGQPQDIANA 227

Query: 247 VLFLASDEARYISGTNLMVDGG 268
            LFL S  A ++SG  L V GG
Sbjct: 228 ALFLCSPAASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  136 bits (345), Expect = 3e-39
 Identities = 76/258 (29%), Positives = 113/258 (43%), Gaps = 28/258 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L G+V  ITGG  G+G +T       GA+V +          + Q+L G P       
Sbjct: 3   HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRG---AAPLSQTLPGVPADA-LRI 58

Query: 74  ---DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+   +    AVD    +FG LD +VN AG        I + D   +++++ +NVK 
Sbjct: 59  GGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGA--FVWGTIADGDADTWDRMYGVNVKT 116

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
             +  K A   +     G I++I + A    G G  AY  +K  V  L + +AAEL   G
Sbjct: 117 TLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRG 176

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V P  + T    A +P+ +        F  +V           T   +A  + FL
Sbjct: 177 ITVNAVLPSIIDTPPNRADMPDAD--------FSRWV-----------TPEQIAAVIAFL 217

Query: 251 ASDEARYISGTNLMVDGG 268
            SDEA+ I+G ++ VDGG
Sbjct: 218 LSDEAQAITGASIPVDGG 235

Length = 239

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  143 bits (361), Expect = 4e-39
 Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 11/259 (4%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            RV L+TG A GIG +  + F + G +V +AD      ++   SLG  PD      DV+ 
Sbjct: 5   SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG--PDHHALAMDVSD 62

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E  +    +    +FG +D++VNNAG++        +  L EF ++  IN+ G +   + 
Sbjct: 63  EAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVARE 122

Query: 138 AARIMIPQTKGT-IISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           A R+MI Q  G  I+++ S AG +      AY+ SK AV+ L +++A E    GIRVN V
Sbjct: 123 ALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAV 182

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
            P  V T + +A L    + + + V  R  + R            ++A AV FLASD+A 
Sbjct: 183 LPGYVRTQM-VAELERAGKLDPSAVRSRIPLGRLGR-------PEEIAEAVFFLASDQAS 234

Query: 257 YISGTNLMVDGGFTSVNHS 275
           YI+G+ L+VDGG+T    S
Sbjct: 235 YITGSTLVVDGGWTVYGGS 253

Length = 520

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  136 bits (345), Expect = 4e-39
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 22/257 (8%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+  L+TG ++GIG +      + GA+V  A        ++    G EP       DV  
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL----DVGD 64

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
           +     A+   +   G  D +VN AGI S     D+       F++V  +N +G     +
Sbjct: 65  DA----AIRAALAAAGAFDGLVNCAGIASLESALDMTAEG---FDRVMAVNARGAALVAR 117

Query: 137 HAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           H AR MI   + G+I+++ S A  +G     AY  SK A+  + + +  ELG +GIRVN 
Sbjct: 118 HVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNS 177

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P    T +A     + +++   +      + R A         +DVA  +LFL SD A
Sbjct: 178 VNPTVTLTPMAAEAWSDPQKSGPMLA--AIPLGRFA-------EVDDVAAPILFLLSDAA 228

Query: 256 RYISGTNLMVDGGFTSV 272
             +SG +L VDGG+T+ 
Sbjct: 229 SMVSGVSLPVDGGYTAR 245

Length = 245

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  136 bits (344), Expect = 6e-39
 Identities = 89/262 (33%), Positives = 122/262 (46%), Gaps = 25/262 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-------GGEPDT 68
           L  R  LITGG+ G+G +        GA V + D+    G+    ++       GG    
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGG--KA 61

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                DV       +A+D  VE+FG LDI+VNNAGI  A      E  + E++ V D+N+
Sbjct: 62  LGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGI--ATDAAFAELSIEEWDDVIDVNL 119

Query: 129 KGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            G F+  + A   MI  +  G I++I SVAG  G  G   Y  SK  ++GL K +A EL 
Sbjct: 120 DGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELA 179

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
             GI VN V+P A+ T +A    P E       V                   ++VA  V
Sbjct: 180 PRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLG-------------EPDEVAALV 226

Query: 248 LFLASDEARYISGTNLMVDGGF 269
            FL SD A Y++G  + VDGGF
Sbjct: 227 AFLVSDAASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  136 bits (343), Expect = 1e-38
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 26/264 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ----VCQSLGGEPDTFFC 71
           L G+V +ITGG+TG+G +    F K  AKV I    D           +  GGE      
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAV-- 62

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVT E DV + +   V++FGTLD+M+NNAGI     P   E  L ++ KV + N+ G 
Sbjct: 63  KGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIEN-AVPS-HEMSLEDWNKVINTNLTGA 120

Query: 132 FHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGK 188
           F G + A +  +    KG II++ SV   I    P    Y  SK  V  + + +A E   
Sbjct: 121 FLGSREAIKYFVEHDIKGNIINMSSVHEQIP--WPLFVHYAASKGGVKLMTETLAMEYAP 178

Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       P++    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP-----------MGYIGKPEEIAAV 227

Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

Length = 261

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  135 bits (343), Expect = 1e-38
 Identities = 94/259 (36%), Positives = 124/259 (47%), Gaps = 11/259 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L G VALITGG +G+G + V  F   GAKV + D       ++    G          D
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGD--AVVGVEGD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSE-FEKVFDINVKGV 131
           V    D   AV   VE+FG LD  + NAGI        DI E  L E F+++F INVKG 
Sbjct: 59  VRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGY 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
             G K A   +   T+G++I   S AG   GG GP  YT SKHAV+GL K +A EL  + 
Sbjct: 119 ILGAKAALPALY-ATEGSVIFTVSNAGFYPGGGGP-LYTASKHAVVGLVKQLAYELAPH- 175

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN V+P  + T L       +  T  +     + + ++    G      D   A +FL
Sbjct: 176 IRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDML-KSILPLGFAPEPEDYTGAYVFL 234

Query: 251 AS-DEARYISGTNLMVDGG 268
           AS  + R  +GT +  DGG
Sbjct: 235 ASRGDNRPATGTVINYDGG 253

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  136 bits (343), Expect = 1e-38
 Identities = 88/273 (32%), Positives = 132/273 (48%), Gaps = 38/273 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L G+ ALITG   GIGE   R+F +HGA + + D+   + +   +  G          D
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVAD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           V     V +A+    EK G +DI+VNNAG+       D+ + D  +F    DIN+KGV++
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDR-DFH--IDINIKGVWN 119

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             K     MI +  G I+ + SV G +    G  AY  +K A++GL K++A E  + GIR
Sbjct: 120 VTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIR 179

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV----- 247
           VN + P  V T +A       E            +AR +N +  E    ++A A+     
Sbjct: 180 VNAICPGYVRTPMA-------ES-----------IARQSNPEDPESVLTEMAKAIPLRRL 221

Query: 248 ----------LFLASDEARYISGTNLMVDGGFT 270
                      FLASDE+ Y++GT  ++DGG T
Sbjct: 222 ADPLEVGELAAFLASDESSYLTGTQNVIDGGST 254

Length = 263

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  135 bits (343), Expect = 1e-38
 Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 17/261 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L G+VA++TGGAT IG +  R     GA+V I D+  + G  V  SLG      F   
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG--ERARFIAT 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN-VKGVF 132
           D+T +  +  AV   V +FG +DI+VN A        D   +  +++    D+N V    
Sbjct: 60  DITDDAAIERAVATVVARFGRVDILVNLACTYL---DDGLASSRADWLAALDVNLVSAAM 116

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +  AA   + +  G I++  S++      G   Y  SK A+  L +++A +L   GIR
Sbjct: 117 --LAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIR 174

Query: 193 VNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           VN VSP        +  L   +R + D        VA   ++ G      +VA  V FL 
Sbjct: 175 VNSVSP-GWTWSRVMDELSGGDRAKADR-------VAAPFHLLGRVGDPEEVAQVVAFLC 226

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SD A +++G +  VDGG++++
Sbjct: 227 SDAASFVTGADYAVDGGYSAL 247

Length = 261

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  141 bits (357), Expect = 4e-38
 Identities = 90/268 (33%), Positives = 121/268 (45%), Gaps = 15/268 (5%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPD 67
           P  + L  RVA +TGGA GIG  T R     GA V +AD+     + V   +    G   
Sbjct: 407 PKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGR 466

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
                 DVT E+ V +A       +G +DI+VNNAGI+ +      E  L E++   DI 
Sbjct: 467 AVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSS--PFEETTLQEWQLNLDIL 524

Query: 128 VKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
             G F   + A R M  Q   G I+ I S      G    AY+ +K A   L + +AAE 
Sbjct: 525 ATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEG 584

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV------GFRNFVARNANMQGTELTA 240
           G YGIRVN V+P AV  G  +     E R E A              A+   +    +  
Sbjct: 585 GTYGIRVNTVNPDAVLQGSGI--WDGEWREERAAAYGIPADELEEHYAKRT-LLKRHIFP 641

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            D+A AV FLAS ++   +G  + VDGG
Sbjct: 642 ADIAEAVFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  133 bits (336), Expect = 6e-38
 Identities = 80/253 (31%), Positives = 118/253 (46%), Gaps = 16/253 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+VA++TGG  GIG+     F + G KV  AD+ +  G    ++ G  P+ FF H DV  
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEG--PNLFFVHGDVAD 58

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E  V   V   +EK G +D++VNNA         +    L E++++  +N+ G +   ++
Sbjct: 59  ETLVKFVVYAMLEKLGRIDVLVNNAAR--GSKGILSSLLLEEWDRILSVNLTGPYELSRY 116

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
               +I + KG II+I S           AY  SK  ++ L   +A  LG   IRVNC+S
Sbjct: 117 CRDELI-KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCIS 174

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  + T             ED             +  G   T  D+AN VLFL   +A +
Sbjct: 175 PGWINTTEQQEFTAAPLTQED----------HAQHPAGRVGTPKDIANLVLFLCQQDAGF 224

Query: 258 ISGTNLMVDGGFT 270
           I+G   +VDGG T
Sbjct: 225 ITGETFIVDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  134 bits (339), Expect = 6e-38
 Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 20/231 (8%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEED 80
           +ITG A+G+G +    + + G ++ +ADV +  G++  + L     D F+  CDV     
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
           + +      EK+G +D++VNNAG++        E  L +++    IN+ GV  G K    
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGVASGG--FFEELSLEDWDWQIAINLMGVVKGCKAFLP 121

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
           +   Q  G I++I S+AG + G    +Y  +K  V+ L++ +  EL    I V+ V P  
Sbjct: 122 LFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSF 181

Query: 201 VATGLALAHLPEEERTED----AMVGFRNFVARNANMQGTELTANDVANAV 247
             T L      +  R  +    A VG          ++ + +TA D+A+ +
Sbjct: 182 FQTNLL-----DSFRGPNPAMKAQVG--------KLLEKSPITAADIADYI 219

Length = 270

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  133 bits (336), Expect = 9e-38
 Identities = 92/264 (34%), Positives = 135/264 (51%), Gaps = 27/264 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L G+VAL+TG  TG+G+       + GA  V     + +  QQ  ++LG    +     D
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSL--TAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF-----EKVFDINVK 129
           ++  E + + VD  VE+FG +DI+VNNAGI       IR AD  EF     + V ++N+K
Sbjct: 61  LSDIEAIKALVDSAVEEFGHIDILVNNAGI-------IRRADAEEFSEKDWDDVMNVNLK 113

Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            VF   + AA+  + Q   G II+I S+    GG+   +YT SKHAV GL K +A E   
Sbjct: 114 SVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAA 173

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-NANMQGTELTANDVANAV 247
            GI VN ++P  +AT    A   +E+R           + R  A   G   T +D+    
Sbjct: 174 KGINVNAIAPGYMATNNTQALRADEDRNAA-------ILERIPAGRWG---TPDDIGGPA 223

Query: 248 LFLASDEARYISGTNLMVDGGFTS 271
           +FLAS  + Y++G  L VDGG+ +
Sbjct: 224 VFLASSASDYVNGYTLAVDGGWLA 247

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  132 bits (335), Expect = 1e-37
 Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 8/259 (3%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEP--DTFFCHCD 74
           G+VAL+TG  +GIG    R     GA + +    D    + V   L  +      +   D
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           ++K   +   V     +FG +DI+VNNAGI   AP   I +    +++ +  +N+  VFH
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAP---IEDFPTEKWDAIIALNLSAVFH 118

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A   M  Q  G II+I SV G +      AY  +KH V+GL K VA E    G+  
Sbjct: 119 TTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTC 178

Query: 194 NCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           N + P  V T L    +    +            +          +T   + +  +FLAS
Sbjct: 179 NAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLAS 238

Query: 253 DEARYISGTNLMVDGGFTS 271
           D A  I+GT + VDGG+T+
Sbjct: 239 DAASQITGTAVSVDGGWTA 257

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  132 bits (334), Expect = 1e-37
 Identities = 72/202 (35%), Positives = 103/202 (50%), Gaps = 6/202 (2%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCH 72
             L G+VALITGG+ GIG +        G KV I A  Q  L ++    L  + +     
Sbjct: 2   MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKEL-EEAAAELNNKGNVLGLA 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV  E DV  AVD  V  FG LD+++ NAG+ G   P + E    E+  V D N+ G F
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGV-GHFAP-VEELTPEEWRLVIDTNLTGAF 118

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           + +K A   +  +  G II+I S+AG     G  AY  SK  ++G ++    +L +YGI+
Sbjct: 119 YTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIK 177

Query: 193 VNCVSPYAVATGLALAHLPEEE 214
           V+ + P +VAT     H P E+
Sbjct: 178 VSTIMPGSVATHFN-GHTPSEK 198

Length = 237

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  132 bits (333), Expect = 2e-37
 Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 15/256 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +V L+TG + G+G +  R F + GA+V +   +     +   +  GE        DV   
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGE-RAIAIQADVRDR 59

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA----DLSEFEKVFDINVKGVFHG 134
           + V + ++     FG +D +VNNA I     PD R+     D  ++++  +  VKG  + 
Sbjct: 60  DQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNL 119

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++        +  G +I+I +       +  H YT +K A+LG  +N+A ELG YGI VN
Sbjct: 120 LQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITVN 179

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            VS   +    A A  P+E           + +A+   + G   T  D+A+AVLF AS  
Sbjct: 180 MVSGGLLKVTDASAATPKE---------VFDAIAQTTPL-GKVTTPQDIADAVLFFASPW 229

Query: 255 ARYISGTNLMVDGGFT 270
           AR ++G NL+VDGG  
Sbjct: 230 ARAVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  132 bits (334), Expect = 2e-37
 Identities = 80/270 (29%), Positives = 116/270 (42%), Gaps = 31/270 (11%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
                  G+   +TG A GIG +    F + GAKV   D            L  E   F 
Sbjct: 1   MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFD---------QAFLTQEDYPFA 51

Query: 71  CH-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDIN 127
               DV+    V       + + G LD++VN AGI   GA           ++++ F +N
Sbjct: 52  TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGA----TDSLSDEDWQQTFAVN 107

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
             G F+  +        Q  G I+++ S A  +  +G  AY  SK A+  L K V  EL 
Sbjct: 108 AGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELA 167

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ---GTEL----TA 240
            YG+R N VSP +  T +      +E+  +  + GF          Q   G  L      
Sbjct: 168 PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPE--------QFKLGIPLGKIARP 219

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFT 270
            ++ANAVLFLASD A +I+  +++VDGG T
Sbjct: 220 QEIANAVLFLASDLASHITLQDIVVDGGAT 249

Length = 252

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  130 bits (328), Expect = 1e-36
 Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 6/190 (3%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT-FFCHCDVTKE 78
           + LITGG +GIG      F K GAKV I D+ +   ++   ++        +  CDV+K 
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           E+V  A     ++ G + I++NNAG+       + E    E EK F++N    F   K  
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGV--VSGKKLLELPDEEIEKTFEVNTLAHFWTTKAF 118

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL---GKYGIRVNC 195
              M+ +  G I++I SVAG I   G   Y  SK A +G ++++  EL   GK GI+   
Sbjct: 119 LPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 196 VSPYAVATGL 205
           V PY + TG+
Sbjct: 179 VCPYFINTGM 188

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  130 bits (329), Expect = 1e-36
 Identities = 83/262 (31%), Positives = 134/262 (51%), Gaps = 21/262 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV--CQSLGGEPDTFFCH 72
           RL  +VA+ITG +TGIG+++     + GA V   D+ + + + V   +S GG+   +  H
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAY--H 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++ E+ V        E+FG +D++ NNAG+  A    I E  +  F+K+  ++++G F
Sbjct: 61  VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNA-AGRIHEYPVDVFDKIMAVDMRGTF 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K    +M+ Q  G+II+  S +G    L    Y  +K AV+   K++A E G+ GIR
Sbjct: 120 LMTKMLLPLMMEQ-GGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIR 178

Query: 193 VNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
            N ++P  + T L   L    E+E    A   F     R      T L       +VA  
Sbjct: 179 ANAIAPGTIETPLVDKLTGTSEDE----AGKTF-----RENQKWMTPLGRLGKPEEVAKL 229

Query: 247 VLFLASDEARYISGTNLMVDGG 268
           V+FLASD++ +I+G  + +DGG
Sbjct: 230 VVFLASDDSSFITGETIRIDGG 251

Length = 272

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  130 bits (327), Expect = 2e-36
 Identities = 85/256 (33%), Positives = 127/256 (49%), Gaps = 9/256 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+ ALITG A GIG +  + + + GA+V IAD+     +     +G  P       DV
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIG--PAACAISLDV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDI-READLSEFEKVFDINVKGVFH 133
           T +  +   V   V+++G++DI+VNNA +   AP  DI RE+    ++++F INV G   
Sbjct: 59  TDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRES----YDRLFAINVSGTLF 114

Query: 134 GMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            M+  AR MI Q + G II++ S AG  G      Y  +K AV+ L ++    L ++GI 
Sbjct: 115 MMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGIN 174

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P  V          +  R E+   G +  +   A   G    A D+    +FLAS
Sbjct: 175 VNAIAPGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLAS 234

Query: 253 DEARYISGTNLMVDGG 268
            +A YI      VDGG
Sbjct: 235 TDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  129 bits (327), Expect = 2e-36
 Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 32/266 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDTFFCHC 73
           +VA++T   +GIG++   L  + G  + I    D  G     ++V +S G   +      
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV-RSHGVRAEIR--QL 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVF 132
           D++   +   A+D  +++ G +D++VNNAG  + AP  D+   D  E+ K+F ++V G F
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDM---DFDEWRKIFTVDVDGAF 116

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              + AAR M+ Q   G II+I SV       G  AYT +KHA+ GL K +A EL ++GI
Sbjct: 117 LCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGI 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
            VN V+P A+AT                M G  +   +  +  G  L      +++A+ V
Sbjct: 177 LVNAVAPGAIAT---------------PMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLV 221

Query: 248 LFLASDEARYISGTNLMVDGGFTSVN 273
            +L S+ A Y +G +L+VDGGF   N
Sbjct: 222 AWLCSEGASYTTGQSLIVDGGFMLAN 247

Length = 256

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  130 bits (327), Expect = 2e-36
 Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 5/258 (1%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-CD 74
           L G+ A++TG A+GIG+       + GA V IAD+  +    V   +            D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E+ V + +D   E+FG++DI+V+NAGI       I     ++++K+  I+V G F  
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVN--PIENYSFADWKKMQAIHVDGAFLT 122

Query: 135 MKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            K A + M    + G +I + SV          AY  +KH +LGL + +A E  K+ +R 
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182

Query: 194 NCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           + V P  V T L    +PE+ +    +       V     + G   T  DVA  VLFL+S
Sbjct: 183 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS 242

Query: 253 DEARYISGTNLMVDGGFT 270
             +  ++G + +V  G+ 
Sbjct: 243 FPSAALTGQSFVVSHGWF 260

Length = 262

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  128 bits (324), Expect = 5e-36
 Identities = 85/264 (32%), Positives = 125/264 (47%), Gaps = 21/264 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTF 69
              G+VAL+TG + GIG++      + G  + +         +   +++ ++LG +    
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI-EALGRK--AL 57

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               +V   E +        E+FG LD+ VNNA  SG   P   E + S ++   +IN K
Sbjct: 58  AVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAA-SGVLRP-AMELEESHWDWTMNINAK 115

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGK 188
            +    + AA++M     G IIS+ S+ G+I  L  +   G SK A+  L + +A EL  
Sbjct: 116 ALLFCAQEAAKLMEKVGGGKIISLSSL-GSIRYLENYTTVGVSKAALEALTRYLAVELAP 174

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GI VN VS  AV T  AL H P  E   +         AR     G  +   DVANAVL
Sbjct: 175 KGIAVNAVSGGAVDTD-ALKHFPNREELLED--------ARAKTPAGRMVEPEDVANAVL 225

Query: 249 FLASDEARYISGTNLMVDGGFTSV 272
           FL S EA  I G  ++VDGG + +
Sbjct: 226 FLCSPEADMIRGQTIIVDGGRSLL 249

Length = 250

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 1e-35
 Identities = 87/263 (33%), Positives = 129/263 (49%), Gaps = 24/263 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFFCH 72
           L G++ALITG + GIG +  + + K GA +   D+   L   G    + LG E   + C 
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVC- 66

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR-----EADLSEFEKVFDIN 127
            DVT E+ V + V    ++ G +DI+VNNAGI       I+     E    +F +V DI+
Sbjct: 67  -DVTDEDGVQAMVSQIEKEVGVIDILVNNAGI-------IKRIPMLEMSAEDFRQVIDID 118

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           +   F   K     MI +  G II+ICS+   +G     AY  +K  +  L KN+A+E G
Sbjct: 119 LNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYG 178

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV-ARN-ANMQGTELTANDVAN 245
           +  I+ N + P  +AT    A L E +        F  F+ A+  A   G      D+A 
Sbjct: 179 EANIQCNGIGPGYIATP-QTAPLRELQADGSRH-PFDQFIIAKTPAARWG---DPEDLAG 233

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
             +FLASD + +++G  L VDGG
Sbjct: 234 PAVFLASDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 2e-35
 Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 28/263 (10%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TG A GIG++  R F   G +V   D+          +LG         CD+T  
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVA-CDLTDA 61

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGA-----PCPDIREADLSEFEKVFDINVKGVFH 133
             + +A+     + G +D++V NAG + A       P    AD         +N++  + 
Sbjct: 62  ASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADN-------ALNLEAAYL 114

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            ++     M+ +++G +++I SV G +  LG  AY+ +K  ++   K +A E G++GIR 
Sbjct: 115 CVEAVLEGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRA 173

Query: 194 NCVSPYAVATGLALAHLPEEERT-EDAMVGF--RNFVARNANMQGTELTANDVANAVLFL 250
           N V+P  V T    A +    +  E+    +  ++F            T +DVANAVLFL
Sbjct: 174 NAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFA-----------TPDDVANAVLFL 222

Query: 251 ASDEARYISGTNLMVDGGFTSVN 273
           AS  AR I+G  L VDGG T+ N
Sbjct: 223 ASPAARAITGVCLPVDGGLTAGN 245

Length = 257

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  126 bits (319), Expect = 3e-35
 Identities = 83/262 (31%), Positives = 124/262 (47%), Gaps = 22/262 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQ--SLGGEPDTFFC 71
           RL G+ ALITG + GIG +  R F   GA V I A   D L Q   +      E +    
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL----SEFEKVFDIN 127
             DV+ +ED  + +D   + +  L I+VNNAG       +IR+A +     E+  +F+ N
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGG------NIRKAAIDYTEDEWRGIFETN 119

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           +   F   ++A  ++       I++I SV+G         Y  +K A+L + +N+A E  
Sbjct: 120 LFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWA 179

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           + GIRVN V+P+ + T L    L + +  E   V  R  + R            +VA AV
Sbjct: 180 EDGIRVNAVAPWYIRTPLTSGPLSDPDYYE--QVIERTPMRRVGE-------PEEVAAAV 230

Query: 248 LFLASDEARYISGTNLMVDGGF 269
            FL    A YI+G  + VDGGF
Sbjct: 231 AFLCMPAASYITGQCIAVDGGF 252

Length = 257

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  126 bits (319), Expect = 3e-35
 Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 15/245 (6%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF--CHCDVT 76
           +V LITG ++GIG +        G +V IA  ++       +SLG   +        DVT
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRV-IATARN---PDKLESLGELLNDNLEVLELDVT 56

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            EE + +AV   +E+FG +D++VNNAG  G   P + E  + E  ++F++NV G     +
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGY-GLFGP-LEETSIEEVRELFEVNVFGPLRVTR 114

Query: 137 HAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
               +M  Q  G I+++ SVAG +    LGP  Y  SK A+  L++++  EL  +GI+V 
Sbjct: 115 AFLPLMRKQGSGRIVNVSSVAGLVPTPFLGP--YCASKAALEALSESLRLELAPFGIKVT 172

Query: 195 CVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTE-LTANDVANAVLFLA 251
            + P  V TG A        E+         R  +  NA   G+       VA+ ++   
Sbjct: 173 IIEPGPVRTGFADNAAGSALEDPEISPYAPERKEIKENAAGVGSNPGDPEKVADVIVKAL 232

Query: 252 SDEAR 256
           + E+ 
Sbjct: 233 TSESP 237

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 3e-35
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 17/259 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT-FFCHC 73
           R   +VA++TG A GIG++      + GA V +AD+     ++V + +  +  T      
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD-IREADLSEFEKVFDINVKGVF 132
           DV+  +   +  D TV  FG +D +VNNA I G    D +       ++K   +N+ G  
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +   + M  +  G I++  S A  +       Y  +K  + GL + +A ELG   IR
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAWLYS-NF--YGLAKVGLNGLTQQLARELGGMNIR 179

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLA 251
           VN ++P  + T       P+E      MV           +  + + T  D+    LFL 
Sbjct: 180 VNAIAPGPIDTEATRTVTPKEFV--ADMV---------KGIPLSRMGTPEDLVGMCLFLL 228

Query: 252 SDEARYISGTNLMVDGGFT 270
           SDEA +I+G    VDGG  
Sbjct: 229 SDEASWITGQIFNVDGGQI 247

Length = 250

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 4e-35
 Identities = 90/263 (34%), Positives = 124/263 (47%), Gaps = 27/263 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+ ALITGG +GIG  T R F   GA+V I        +     LG          
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADA 61

Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
            DV  ++ +  A+    E FG LD +  NAG++  AP  D  EA    F++ F+ NVKG 
Sbjct: 62  GDVAAQKALAQALA---EAFGRLDAVFINAGVAKFAPLEDWDEAM---FDRSFNTNVKGP 115

Query: 132 FHGMKHAARIMIPQTKGTIISIC-SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           +  ++    ++        I +  S+   IG      Y  SK A+L L K ++ EL   G
Sbjct: 116 YFLIQALLPLL---ANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRG 172

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-----TANDVAN 245
           IRVN VSP  V T L    L   E T DA+          A +Q         T  ++A 
Sbjct: 173 IRVNAVSPGPVQTPL-YGKLGLPEATLDAV---------AAQIQALVPLGRFGTPEEIAK 222

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
           AVL+LASDE+ +I G+ ++VDGG
Sbjct: 223 AVLYLASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  124 bits (314), Expect = 2e-34
 Identities = 73/269 (27%), Positives = 123/269 (45%), Gaps = 38/269 (14%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT--FFCHCDV 75
            ++ LITG A  IG++  +     GA++ +AD+     +Q+ + L             D+
Sbjct: 2   DKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDI 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGIS----GAPCPDIREADLSEFEKVFDINVKGV 131
           T +E +   ++  +EKFG +DI++NNA  S    G+      E    ++ +V ++N+ G 
Sbjct: 62  TSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSR---FEEFPYEQWNEVLNVNLGGA 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGG----------LGPHAYTGSKHAVLGLNKN 181
           F   +   ++   Q KG+II+I S+ G I              P  Y+  K  ++ L K 
Sbjct: 119 FLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKY 178

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM--QGTELT 239
           +A      GIRVN +SP     G  L + P E            F+ +          L 
Sbjct: 179 LAKYYADTGIRVNAISP-----GGILNNQPSE------------FLEKYTKKCPLKRMLN 221

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             D+  A++FL SD + Y++G NL++DGG
Sbjct: 222 PEDLRGAIIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  125 bits (315), Expect = 2e-34
 Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 20/259 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA--DVQDNLGQQVCQSLGGEPDTFFCH 72
           +L G+ ALITGG +GIG +    F + GA V I     +++  ++  + +  E       
Sbjct: 23  KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLI 82

Query: 73  CDVTKEEDVC-SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
                +E  C   V   V++FG LDI+VNNA     P   I +    + EK F  N+  +
Sbjct: 83  PGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQ-HPQESIEDITTEQLEKTFRTNIFSM 141

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELGKY 189
           F+  K A   +      +II+  SV    G   PH   Y  +K A++   + ++ +L + 
Sbjct: 142 FYLTKAALPHLKK--GSSIINTTSVTAYKG--SPHLLDYAATKGAIVAFTRGLSLQLAEK 197

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  + T L  +  PEE+ +E    G +  + R    Q  E     VA A +F
Sbjct: 198 GIRVNAVAPGPIWTPLIPSSFPEEKVSE---FGSQVPMGRAG--QPAE-----VAPAYVF 247

Query: 250 LASDEARYISGTNLMVDGG 268
           LAS ++ Y++G  L V+GG
Sbjct: 248 LASQDSSYVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  125 bits (315), Expect = 2e-34
 Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 24/254 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFCHC 73
           G+ ALITG ++GIG    +   + G  + +     D  + L +++    G E +      
Sbjct: 6   GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVI--PA 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++  E +    D   E+ G +D++VNNAG          E  L E E++  +N+  +  
Sbjct: 64  DLSDPEALERLEDELKERGGPIDVLVNNAGFGTFG--PFLELSLDEEEEMIQLNILALTR 121

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K     M+ +  G II+I S AG I       Y+ +K  VL  ++ +  EL   G++V
Sbjct: 122 LTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKV 181

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF-LAS 252
             V P    T        + + ++  ++     V          L+  DVA A L  L  
Sbjct: 182 TAVCPGPTRTEFF-----DAKGSDVYLLSPGELV----------LSPEDVAEAALKALEK 226

Query: 253 DEARYISGTNLMVD 266
            +   I G      
Sbjct: 227 GKREIIPGLPNKAL 240

Length = 265

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  123 bits (311), Expect = 5e-34
 Identities = 91/274 (33%), Positives = 135/274 (49%), Gaps = 45/274 (16%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQV--CQSLGGEPDTFFC 71
            L  +V +ITGGA G+G +      + GAK+ + D+ Q+ L + V  C +LG E   +  
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAA 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA--------------DL 117
             +VT EEDV +      E FG L+ ++NNAGI       +R+                L
Sbjct: 62  --NVTDEEDVEATFAQIAEDFGQLNGLINNAGI-------LRDGLLVKAKDGKVTSKMSL 112

Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
            +F+ V D+N+ GVF   + AA  MI   +KG II+I S+A A G +G   Y+ SK  V 
Sbjct: 113 EQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-GNMGQTNYSASKAGVA 171

Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE-ERTEDAMVGFRNFVARNANMQG 235
            +    A EL +YGIRV  ++P  + T +  A  PE  ER E  M+     V R      
Sbjct: 172 AMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLE-KMIP----VGRLG---- 222

Query: 236 TELTANDVANAVLF-LASDEARYISGTNLMVDGG 268
                 ++A+ V F + +D   Y++G  L +DGG
Sbjct: 223 ---EPEEIAHTVRFIIEND---YVTGRVLEIDGG 250

Length = 253

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  121 bits (305), Expect = 3e-33
 Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 20/237 (8%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGE-PDTFFCHC-DVTK 77
            LITG ++GIGE+T R F K GAK+ +     + L Q++   LG + P        DV+ 
Sbjct: 3   VLITGASSGIGEATARRFAKAGAKLILTGRRAERL-QELADELGAKFPVKVLPLQLDVSD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            E + +A++   E+F  +DI+VNNAG++    P  +EADL ++E + D NVKG+ +  + 
Sbjct: 62  RESIEAALENLPEEFRDIDILVNNAGLALGLDP-AQEADLEDWETMIDTNVKGLLNVTRL 120

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
              IMI + +G II++ S+AG     G + Y  +K AV   + N+  +L   GIRV  + 
Sbjct: 121 ILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNIE 180

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-QGTE-LTANDVANAVLFLAS 252
           P     GL          TE ++V F     +   + +G E LT  D+A  +L++AS
Sbjct: 181 P-----GLV--------ETEFSLVRFHGDKEKADKVYEGVEPLTPEDIAETILWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  121 bits (304), Expect = 4e-33
 Identities = 80/259 (30%), Positives = 119/259 (45%), Gaps = 22/259 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFF 70
           L  +VA++TG + GIG +  R     G  V +     A   D L  ++ ++ GG      
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI-EAAGGRAIAV- 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV     V    D     FG +D++VNNAG+   P   I + DL +F++    N++G
Sbjct: 61  -QADVADAAAVTRLFDAAETAFGRIDVLVNNAGV--MPLGTIADFDLEDFDRTIATNLRG 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F  ++ AAR +     G II++ +   A+   G   Y  SK AV GL   +A EL   G
Sbjct: 118 AFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRG 175

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VN V+P  VAT L      +     D + G    + R         T  ++A AV FL
Sbjct: 176 ITVNAVAPGPVATELFFN--GKSAEQIDQLAGL-APLERLG-------TPEEIAAAVAFL 225

Query: 251 ASDEARYISGTNLMVDGGF 269
           A  +  +++G  L V+GGF
Sbjct: 226 AGPDGAWVNGQVLRVNGGF 244

Length = 245

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  120 bits (304), Expect = 6e-33
 Identities = 86/262 (32%), Positives = 129/262 (49%), Gaps = 26/262 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDTFFCHCDVTK 77
           +  L+TGG+ G+G +  R F + GA+V +   Q ++  + +   LG          DVT 
Sbjct: 6   QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDR--AIALQADVTD 63

Query: 78  EEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREA--DLS--EFEKVFDINVKGVF 132
            E V +      E FG  +  +VNNA    +   D R+   D++  +F++  + +VKG  
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           + ++ A   M  Q  G II+I +       +  H YT +K A+LGL +N+AAELG YGI 
Sbjct: 124 NTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGIT 183

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VN VS   + T  A A  P+E           + +A       T L    T  + A+AVL
Sbjct: 184 VNMVSGGLLRTTDASAATPDE---------VFDLIA-----ATTPLRKVTTPQEFADAVL 229

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           F AS  AR ++G NL+VDGG  
Sbjct: 230 FFASPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  120 bits (301), Expect = 8e-33
 Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 16/257 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGGEP-DTFFCH 72
           +L G+VA++TGGA GIG++      + GAKV I  +      + +   LG E  D +   
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+K ED    V+  V  FG +DI+VNNAGI+       ++ +  ++E+V D+N+  VF
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDR--TFKKLNREDWERVIDVNLSSVF 120

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +        +    +G IISI S+ G  GG G   Y+ +K  +LG  K++A EL K  + 
Sbjct: 121 NTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVT 180

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN + P  + T + +A +PEE R +         VA+    +  +  A+++A  V++L  
Sbjct: 181 VNAICPGFIDTEM-VAEVPEEVRQK--------IVAKIPKKRFGQ--ADEIAKGVVYLCR 229

Query: 253 DEARYISGTNLMVDGGF 269
           D A YI+G  L ++GG 
Sbjct: 230 DGA-YITGQQLNINGGL 245

Length = 247

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  120 bits (303), Expect = 9e-33
 Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 23/238 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----DNLGQQVCQSLGGEPDTFFCHC 73
           G+V +ITG + GIG +      + GA++ +A        +L Q+     GGE        
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQE-LADHGGEALVV--PT 57

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DV+  E     ++  V +FG +DI+VNNAGI+  +   ++   DLS FE+V  +N  G  
Sbjct: 58  DVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELT--DLSVFERVMRVNYLGAV 115

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +   HAA   +  ++G I+ + S+AG  G      Y  SKHA+ G   ++  EL   G+ 
Sbjct: 116 Y-CTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVA 174

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-LTANDVANAVLF 249
           V  V P  VAT                 +         + MQ ++ ++A + A A+L 
Sbjct: 175 VTVVCPGFVAT-----------DIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILP 221

Length = 263

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  119 bits (299), Expect = 1e-32
 Identities = 85/237 (35%), Positives = 111/237 (46%), Gaps = 28/237 (11%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE 79
           AL+TG + GIGE+T RL H  G +V I A  +  L     Q L G         DV  E 
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG---VLGLAGDVRDEA 59

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA 139
           DV  AVD   E FG LD +VNNAG+ G   P + E    E+  V D N+ G F+ +  AA
Sbjct: 60  DVRRAVDAMEEAFGGLDALVNNAGV-GVMKP-VEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 140 RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY 199
             ++ +  GTI+++ S+AG     G  AY  SK  +LGL++    +L +  IRV  V P 
Sbjct: 118 PALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPG 177

Query: 200 AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           +V TG A          E                Q  +L   DVA AVLF     AR
Sbjct: 178 SVDTGFA-------GSPEG---------------QAWKLAPEDVAQAVLFALEMPAR 212

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 1e-32
 Identities = 77/262 (29%), Positives = 117/262 (44%), Gaps = 24/262 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFF 70
           L G+VAL+TG A G+G    R     GA V +     A ++  +          E   F 
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF- 67

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+  EE V +A      + G LDI+VNN G        + E D +    + + ++  
Sbjct: 68  ---DIADEEAVAAAFARIDAEHGRLDILVNNVGARDRR--PLAELDDAAIRALLETDLVA 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
                + AA+ M  Q  G II+I S+AG +   G   Y  +K  + GL + +AAE G +G
Sbjct: 123 PILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHG 182

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVL 248
           I  N ++P   AT              D  VG   ++A+   +   G      ++A A +
Sbjct: 183 ITSNAIAPGYFATE------TNAAMAADPAVG--PWLAQRTPLGRWG---RPEEIAGAAV 231

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FLAS  A Y++G  L VDGG++
Sbjct: 232 FLASPAASYVNGHVLAVDGGYS 253

Length = 256

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  119 bits (299), Expect = 2e-32
 Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 31/261 (11%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
            ++TG A GIG +  R   + GA V   D+   L  +    L   P       DV     
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTP------LDVADAAA 54

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           V       + + G +D +VN AG+   GA  P   E    ++E+ F +NV GVF+ ++  
Sbjct: 55  VREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTE----DWEQTFAVNVTGVFNLLQAV 110

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
           A  M  +  G I+++ S A  +  +   AY  SK A+  L+K +  EL  YG+R N VSP
Sbjct: 111 APHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSP 170

Query: 199 YAVATGLALAHLPEEERTEDAMVG----FR-----NFVARNANMQGTELTANDVANAVLF 249
            +  T +      +E+     + G    FR       +A+ A          D+ANAVLF
Sbjct: 171 GSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPA----------DIANAVLF 220

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD+A +I+  +L+VDGG T
Sbjct: 221 LASDQAGHITMHDLVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  118 bits (296), Expect = 6e-32
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 14/259 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L  + A++TGG  GIG +T R F + GAKV + D+     ++V   +   GG    F   
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAF--A 58

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CD+T  + V +AV    +  G +D++VNNAG          + +   +E++  IN+ G  
Sbjct: 59  CDITDRDSVDTAVAAAEQALGPVDVLVNNAGWD--KFGPFTKTEPPLWERLIAINLTGAL 116

Query: 133 HGMKHA-ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           H M HA    M+ +  G I++I S A  +G  G   Y   K  ++  +K +A E  ++GI
Sbjct: 117 H-MHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGI 175

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN V P    T L        E  E     F   +       G     +D+  A+LF +
Sbjct: 176 TVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL-----GRLGQPDDLPGAILFFS 230

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD+A +I+G  L V GG T
Sbjct: 231 SDDASFITGQVLSVSGGLT 249

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  118 bits (297), Expect = 6e-32
 Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 16/234 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCHCD 74
           G+V +ITG ++GIGE       + GA++ ++  ++   ++V   C  LG  P       D
Sbjct: 3   GKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGA-PSPHVVPLD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           ++  ED    V+  ++ FG LDI++NNAGIS        +  +    K+ ++N  G    
Sbjct: 62  MSDLEDAEQVVEEALKLFGGLDILINNAGISMR--SLFHDTSIDVDRKIMEVNYFGPVAL 119

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A   +I +++G+I+ + S+AG IG     AY  SKHA+ G   ++ AEL +  I V 
Sbjct: 120 TKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVT 179

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            V P  + T +A+  L  +              A+  +     ++  + A  +L
Sbjct: 180 VVCPGLIDTNIAMNALSGDGSMS----------AKMDDTTANGMSPEECALEIL 223

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  116 bits (293), Expect = 1e-31
 Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 5/197 (2%)

Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEP-DTFF 70
            Q L G+ ALITG   GIG +      K G  V  +A  ++NL + V + +         
Sbjct: 2   AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-KAVAEEVEAYGVKVVI 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV+  E+V +A++    + G++DI++NNAGIS        E D +E+EK+  +N+ G
Sbjct: 61  ATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFG--KFLELDPAEWEKIIQVNLMG 118

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V++  +     MI +  G II+I S AG  G     AY+ SK  VLGL +++  E+ K+ 
Sbjct: 119 VYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHN 178

Query: 191 IRVNCVSPYAVATGLAL 207
           IRV  ++P  VAT +A+
Sbjct: 179 IRVTALTPSTVATDMAV 195

Length = 239

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 2e-31
 Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 25/261 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCD 74
           L G+VA+ITG  TG+G+       K GA +    V +    Q   ++LG +    F   D
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRK--FHFITAD 63

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF-----EKVFDINVK 129
           + +++D+ S V   VE  G +DI++NNAGI       IR  DL EF     + V +IN K
Sbjct: 64  LIQQKDIDSIVSQAVEVMGHIDILINNAGI-------IRRQDLLEFGNKDWDDVININQK 116

Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            VF   +  A+  + Q   G II+I S+    GG+   +YT SK AV+GL + +A EL +
Sbjct: 117 TVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQ 176

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           Y I VN ++P  +AT    A   +  R E  +          A+  G   T +D+A   +
Sbjct: 177 YNINVNAIAPGYMATDNTAALRADTARNEAILERI------PASRWG---TPDDLAGPAI 227

Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL+S  + Y++G  L VDGG+
Sbjct: 228 FLSSSASDYVTGYTLAVDGGW 248

Length = 251

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  115 bits (291), Expect = 5e-31
 Identities = 73/231 (31%), Positives = 101/231 (43%), Gaps = 23/231 (9%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
            ITG A+GIG +T  LF   G +V   D+ +     +   LG   + +    DVT     
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAG-NAWTGALDVTDRAAW 63

Query: 82  CSAV-DLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
            +A+ D      G LD++ NNAGI   G       +  L   ++V DINVKGV +G  HA
Sbjct: 64  DAALADFAAATGGRLDVLFNNAGILRGG----PFEDIPLEAHDRVIDINVKGVLNGA-HA 118

Query: 139 ARIMIPQTKGT-IISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           A   +  T G  +I+  S +   G  G   Y+ +K AV GL + +  E  ++GIRV  V 
Sbjct: 119 ALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVM 178

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           P  V T + L     E               +     G  LT  DVA AV 
Sbjct: 179 PLFVDTAM-LDGTSNEVDAG---------STKRL---GVRLTPEDVAEAVW 216

Length = 260

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 6e-31
 Identities = 85/265 (32%), Positives = 123/265 (46%), Gaps = 28/265 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L GR AL+TG + GIG +      + GA+V +       L        G          D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           VT  + V +A+D    + G +DI+VNNAG+    P  D   AD   FE++   N+  VF+
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDF-PAD--AFERLLRTNISSVFY 124

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +  AR MI +  G II+I SV  A+   G   YT +K AV  L K +A +  K+G++ 
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQC 184

Query: 194 NCVSPYAVATGL--ALAHLPE-----EERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
           N ++P    T L  AL   PE     E+RT     G                   ++  A
Sbjct: 185 NAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWG----------------KVEELVGA 228

Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
            +FLASD + +++G  L VDGG T+
Sbjct: 229 CVFLASDASSFVNGHVLYVDGGITA 253

Length = 255

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  115 bits (289), Expect = 6e-31
 Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 23/240 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFC 71
           L G+VAL+TG ++GIGE+T R     GA V IA    D  + L  ++ ++ GG+      
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADEL-EAEGGK--ALVL 57

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVK 129
             DVT E+ V +AV+ TVE  G LDI+VNNAGI   G     + +AD +++ ++ D N+ 
Sbjct: 58  ELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGP----VEDADTTDWTRMIDTNLL 113

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G+ +    A    + + KGTI++I SVAG +       Y  +K  V   ++ +  E+ + 
Sbjct: 114 GLMYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTER 173

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+RV  + P  V T L   H+      E           R + +   +L A D+A AV +
Sbjct: 174 GVRVVVIEPGTVDTELR-DHITHTITKEAYE-------ERISTI--RKLQAEDIAAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  115 bits (290), Expect = 6e-31
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 34/269 (12%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC--HCDV 75
            +VA++ GG   +GE       + G  V +AD+     ++V   +  E          D 
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADA 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T E+ V +      E F  +D++V +AGI  A    I + +L +F++   +N+ G F   
Sbjct: 62  TNEQSVIALSKGVDEIFKRVDLLVYSAGI--AKSAKITDFELGDFDRSLQVNLVGYFLCA 119

Query: 136 KHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +  +++MI    +G II I S +G +G      Y+ +K   +GL +++A +L ++GI VN
Sbjct: 120 REFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVN 179

Query: 195 CV-------SP--------YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
            +       SP        YA   G     + E E         + ++ +    +G +  
Sbjct: 180 SLMLGNLLKSPMFQSLLPQYAKKLG-----IKESEVE-------QYYIDKVPLKRGCDY- 226

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             DV N +LF AS +A Y +G ++ + GG
Sbjct: 227 -QDVLNMLLFYASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 7e-31
 Identities = 80/259 (30%), Positives = 132/259 (50%), Gaps = 18/259 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-GGEPDTFFCHCD 74
           L G+ ALITG +TGIG+     + + GA+V IA    +  +++   +           CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V++ + V S +D    + G +DI V NAGI       + +  L EF+++ + NV GVF  
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTP--MLDMPLEEFQRLQNTNVTGVFLT 124

Query: 135 MKHAARIMIPQTK-GTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELGKYGI 191
            + AA+ M+ Q + G II+  S++G I  +      Y  SK AV+ L K +A EL  + I
Sbjct: 125 AQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKI 184

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN VSP  + T L +    E +   +  +             G      ++A   L+LA
Sbjct: 185 RVNSVSPGYILTEL-VEPYTEYQPLWEPKIPL-----------GRLGRPEELAGLYLYLA 232

Query: 252 SDEARYISGTNLMVDGGFT 270
           S+ + Y++G+++++DGG+T
Sbjct: 233 SEASSYMTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  114 bits (288), Expect = 8e-31
 Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 7/186 (3%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD----TFFCH- 72
           G+  LITGG++GIG++  +   K GA V I    ++  ++  + +  E +          
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++  E+V  A    VEK G  D++VN AGIS        +    EFE+  D+N  G  
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS--IPGLFEDLTAEEFERGMDVNYFGSL 118

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +       +M  Q  G I+ + S A  +G  G  AY  SK A+ GL +++  EL  Y IR
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 193 VNCVSP 198
           V+ V P
Sbjct: 179 VSVVYP 184

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  114 bits (288), Expect = 9e-31
 Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 31/267 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKV--CIADVQDNLGQQVCQSLGGEPDTFFCH 72
            L G+ AL+TGG  GIG + V      GA+V  C  +      +++ + L    +  F  
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARN-----QKELDECLTEWREKGFKV 57

Query: 73  ----CDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADL----SEFEKV 123
               CDV+   +    +D     F G L+I+VNNAG +      IR+        ++  +
Sbjct: 58  EGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTN------IRKEAKDYTEEDYSLI 111

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
              N +  +H  + A  ++     G I+ I SVAG I       Y  +K A+  L +++A
Sbjct: 112 MSTNFEAAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLA 171

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E  K  IRVN V+P+ +AT L    + ++E  +         + R    +  E    +V
Sbjct: 172 CEWAKDNIRVNAVAPWVIATPLVEPVIQQKENLD-------KVIERTPLKRFGE--PEEV 222

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
           A  V FL    A YI+G  + VDGG T
Sbjct: 223 AALVAFLCMPAASYITGQIIAVDGGLT 249

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  114 bits (288), Expect = 9e-31
 Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD---TFFCHCDV 75
           ++AL+TG   GIG +  R     G +V       N   +      G  +         DV
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKE-LDV 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E+   A+    E+ G +DI+VNNAGI+       +     E+  V + N+  VF+  
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGITRDSV--FKRMSHQEWNDVINTNLNSVFNVT 119

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M  Q  G II+I SV G  G  G   Y+ +K  ++G  K +A+E  +YGI VNC
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  +AT +     PE  ++    +  +              T  ++A AV FL S+ A
Sbjct: 180 IAPGYIATPMVEQMGPEVLQSIVNQIPMKRLG-----------TPEEIAAAVAFLVSEAA 228

Query: 256 RYISGTNLMVDGGF 269
            +I+G  + ++GG 
Sbjct: 229 GFITGETISINGGL 242

Length = 245

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  114 bits (287), Expect = 1e-30
 Identities = 85/259 (32%), Positives = 126/259 (48%), Gaps = 27/259 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             G+ AL+TG   GIG +TV+   K GA+V  ++  Q +L   V +  G EP    C  D
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEP---VC-VD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           ++  +    A +  +   G +D++VNNA +  A      E     F++ FD+NV+ V H 
Sbjct: 61  LSDWD----ATEEALGSVGPVDLLVNNAAV--AILQPFLEVTKEAFDRSFDVNVRAVIHV 114

Query: 135 MKHAARIMI-PQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIR 192
            +  AR MI     G+I+++ S A +   L  H  Y  +K A+  L K +A ELG + IR
Sbjct: 115 SQIVARGMIARGVPGSIVNVSSQA-SQRALTNHTVYCSTKAALDMLTKVMALELGPHKIR 173

Query: 193 VNCVSPYAVAT--GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           VN V+P  V T  G      PE+ +     +    F               DV NA+LFL
Sbjct: 174 VNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFA-----------EVEDVVNAILFL 222

Query: 251 ASDEARYISGTNLMVDGGF 269
            SD++   +G+ L VDGGF
Sbjct: 223 LSDKSSMTTGSTLPVDGGF 241

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 2e-30
 Identities = 85/256 (33%), Positives = 130/256 (50%), Gaps = 19/256 (7%)

Query: 11  PAVQRLVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQ--SLGGEP 66
           P    L G+V L+T  A TGIG +T R   + GA+V I+D+ +  LG+   +  +  G  
Sbjct: 10  PGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLG 69

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFD 125
                 CDVT E  V + +D  VE+ G LD++VNNAG+ G  P  D+ +    E+ +V D
Sbjct: 70  RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDD---EWSRVLD 126

Query: 126 INVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           + + G F   + A R M  +   G I++  SV G     G   Y  +K  V+ L +  A 
Sbjct: 127 VTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSAL 186

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E  +YG+R+N V+P ++A    LA +   E  ++         AR A  +  E    +VA
Sbjct: 187 EAAEYGVRINAVAP-SIAMHPFLAKVTSAELLDE-------LAAREAFGRAAEPW--EVA 236

Query: 245 NAVLFLASDEARYISG 260
           N + FLASD + Y++G
Sbjct: 237 NVIAFLASDYSSYLTG 252

Length = 262

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 3e-30
 Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 20/268 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD--VQDNLGQQVCQSLGGEPDTFFCH 72
            L  +V ++TGGA+GIG +      + GA   I      D+   +  ++L   P   F  
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQ--PRAEFVQ 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGV 131
            D+T +     AV+ TV KFG +D +VNNAG++ G       EA    F    + N+   
Sbjct: 62  VDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGL----EAGREAFVASLERNLIH- 116

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           ++ M H     +  ++G I++I S     G  G   Y  +K A L L +  A  L K G+
Sbjct: 117 YYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGV 176

Query: 192 RVNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           RVN V P  V T L    +A   + E    A+        R   M     TA ++A+  +
Sbjct: 177 RVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHR---MT----TAEEIADTAV 229

Query: 249 FLASDEARYISGTNLMVDGGFTSVNHSL 276
           FL S+ + + +G  L VDGG+  ++ +L
Sbjct: 230 FLLSERSSHTTGQWLFVDGGYVHLDRAL 257

Length = 258

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 1e-29
 Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 41/270 (15%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA------DVQDNL------GQQVCQS 61
            +L G+VALITGG +GIG +   LF K GA + I       D  +        G + C  
Sbjct: 42  GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVK-CLL 100

Query: 62  LGGEPDTFFCHCDVTKEEDVC-SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           + G         DV  +E  C  AV+ TV + G LDI+VNNA     P   + +    + 
Sbjct: 101 IPG---------DV-SDEAFCKDAVEETVRELGRLDILVNNAAFQ-YPQQSLEDITAEQL 149

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           +K F  N+   FH M  AA   +P  K    II+  S+ G  G      Y+ +K A+   
Sbjct: 150 DKTFKTNIYSYFH-MTKAA---LPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAF 205

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +++A  L + GIRVN V+P  + T L  +   EE+ ++    G    + R    Q  EL
Sbjct: 206 TRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQ---FGSNTPMQRPG--QPEEL 260

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
                A A +FLAS ++ YI+G  L V+GG
Sbjct: 261 -----APAYVFLASPDSSYITGQMLHVNGG 285

Length = 290

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  112 bits (281), Expect = 1e-29
 Identities = 84/263 (31%), Positives = 122/263 (46%), Gaps = 19/263 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVC--QSLGGEPDTFF 70
             L  +VAL+T    GIG +  R   + GA V ++   Q N+ + V   Q  G       
Sbjct: 6   DPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTV 65

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
           CH  V K ED    V   V   G +DI+V+NA +      +I ++    ++K+ D+NVK 
Sbjct: 66  CH--VGKAEDRERLVATAVNLHGGVDILVSNAAV-NPFFGNILDSTEEVWDKILDVNVKA 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
                K     M  +  G+++ + SVA      GLGP  Y  SK A+LGL KN+A EL  
Sbjct: 123 TALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGP--YNVSKTALLGLTKNLAPELAP 180

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
             IRVNC++P  + T  + A   ++   E      R  + R            D A  V 
Sbjct: 181 RNIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLR--IRRLGQ-------PEDCAGIVS 231

Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FL S++A YI+G  ++V GG  S
Sbjct: 232 FLCSEDASYITGETVVVGGGTPS 254

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  111 bits (279), Expect = 2e-29
 Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 27/264 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFF-CHC 73
           L G+VA++TG  TG+G+       + G   V I  V+     +   +LG     F     
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALG---RRFLSLTA 64

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF-----EKVFDINV 128
           D+ K + + + ++  V +FG +DI+VNNAG+       IR  D  EF     + V ++N+
Sbjct: 65  DLRKIDGIPALLERAVAEFGHIDILVNNAGL-------IRREDAIEFSEKDWDDVMNLNI 117

Query: 129 KGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           K VF   + AA+  I Q  G  II+I S+    GG+   +YT SK  V+G+ + +A E  
Sbjct: 118 KSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWA 177

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           K+ I VN ++P  +AT        +E+R+ + +          A   G     +D+   V
Sbjct: 178 KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRI------PAGRWG---LPSDLMGPV 228

Query: 248 LFLASDEARYISGTNLMVDGGFTS 271
           +FLAS  + YI+G  + VDGG+ +
Sbjct: 229 VFLASSASDYINGYTIAVDGGWLA 252

Length = 253

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 2e-29
 Identities = 80/254 (31%), Positives = 123/254 (48%), Gaps = 19/254 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSL-GGEPDTFFCH 72
           RL G+VAL+TGG  G+G +  R F + GA  + I       G+     L        F  
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKG 130
            D++  ED    V    E FG LD +VN AG++  G     I +     F++ F +NV+ 
Sbjct: 63  ADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGT----ILDTSPELFDRHFAVNVRA 118

Query: 131 VFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            F  M+ A ++M   + +GTI++I S++   G     AY  SK A+  L +N A  L + 
Sbjct: 119 PFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRN 178

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR-NFVARNANMQ--GTELTANDVANA 246
            IRVN ++   +AT         E+R +    G   +++ + A  Q  G  L  ++VA A
Sbjct: 179 RIRVNGLNIGWMAT-------EGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARA 231

Query: 247 VLFLASDEARYISG 260
           V FL SDE+  ++G
Sbjct: 232 VAFLLSDESGLMTG 245

Length = 260

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  110 bits (277), Expect = 4e-29
 Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 23/261 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR AL+TG + GIGE   RL H  GA V +   +    + +   LG     F    ++
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIF--PANL 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  ++V +           +DI+VNNAGI+      +R +D  +++ V ++N+   F   
Sbjct: 62  SDRDEVKALGQKAEADLEGVDILVNNAGITKDGL-FVRMSD-EDWDSVLEVNLTATFRLT 119

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M+ +  G II+I SV G  G  G   Y  SK  ++G +K++A E+    + VNC
Sbjct: 120 RELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNC 179

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLA 251
           V+P  +               E AM G  N   + A M    +    T  +VA+AV +LA
Sbjct: 180 VAPGFI---------------ESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLA 224

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           S EA Y++G  + V+GG   +
Sbjct: 225 SSEAAYVTGQTIHVNGGMAMI 245

Length = 245

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  110 bits (277), Expect = 4e-29
 Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 28/215 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS------------L 62
           R  GRV L+TG   G+G +    F + GAKV + D+  +       S             
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 63  GGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE- 119
           GG+   +       V   ED    V   ++ FG +DI+VNNAGI      D   A +SE 
Sbjct: 62  GGKAVANYD----SV---EDGEKIVKTAIDAFGRVDILVNNAGI----LRDRSFAKMSEE 110

Query: 120 -FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
            ++ V  +++KG F   + A   M  Q  G II+  S AG  G  G   Y+ +K  +LGL
Sbjct: 111 DWDLVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGL 170

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
           +  +A E  KY I  N ++P A  + +    +PE+
Sbjct: 171 SNTLAIEGAKYNITCNTIAPAA-GSRMTETVMPED 204

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  109 bits (274), Expect = 1e-28
 Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 19/254 (7%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL--GQQVCQSLGGEPDTF-FCHCDV 75
           R+AL+TGG  GIG +  +   K G +V  A+   N    +   Q  G     F     DV
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRV-AANCGPNEERAEAWLQEQGALGFDFRVVEGDV 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  E   +AV     + G +D++VNNAGI+       ++    ++  V D N+  VF+  
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGITRDAT--FKKMTYEQWSAVIDTNLNSVFNVT 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M  +  G II+I SV G  G  G   Y+ +K  ++G  K +A E    G+ VN 
Sbjct: 118 QPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNT 177

Query: 196 VSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           +SP  +AT + +A + E+      A +                    ++A AV FLAS+E
Sbjct: 178 ISPGYIATDMVMA-MREDVLNSIVAQIPVGRLGR-----------PEEIAAAVAFLASEE 225

Query: 255 ARYISGTNLMVDGG 268
           A YI+G  L ++GG
Sbjct: 226 AGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  109 bits (274), Expect = 1e-28
 Identities = 74/269 (27%), Positives = 114/269 (42%), Gaps = 34/269 (12%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L G+ AL+TGG  GIG +TV    + GA+V              +         F   D
Sbjct: 6   ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS--------RPDDLPEGVEFVAAD 57

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +T  E   +     +E+ G +DI+V+  G S AP          E++   ++N+      
Sbjct: 58  LTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLA---- 113

Query: 135 MKHAARI-------MIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAEL 186
              A R+       MI +  G II + S+   +       AY  +K A+   +K+++ E+
Sbjct: 114 ---AVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEV 170

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ-------GTELT 239
              G+RVN VSP  + T  A+A     ER  +A        A+   M        G    
Sbjct: 171 APKGVRVNTVSPGWIETEAAVALA---ERLAEAAGTDYE-GAKQIIMDSLGGIPLGRPAE 226

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             +VA  + FLASD A  I+GT  ++DGG
Sbjct: 227 PEEVAELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score =  107 bits (270), Expect = 6e-28
 Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 7/194 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G V L+TGGA+G+G + V  F   GA+V + D +   G Q  ++  G+        D
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD-KSAAGLQELEAAHGD-AVVGVEGD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSE-FEKVFDINVKGV 131
           V   +D   AV   V  FG +D ++ NAGI        DI +  + E F++VF INVKG 
Sbjct: 60  VRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGY 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              +K AA   +  ++G++I   S AG     G   YT +KHAV+GL K +A EL  Y +
Sbjct: 120 LLAVK-AALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-V 177

Query: 192 RVNCVSPYAVATGL 205
           RVN V+P  +++ L
Sbjct: 178 RVNGVAPGGMSSDL 191

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 9e-28
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 25/260 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFC-HCDVT 76
           +V +ITG + GIG +T  L  + G  VC+  +++ +  + V Q++  +         DV 
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E DV    +    + G LD +VNNAGI  A    + + D +   ++F  NV G F   +
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQM-RLEQMDAARLTRIFATNVVGSFLCAR 121

Query: 137 HAARIMIPQ---TKGTIISICSVAGAIGGLGPHA-YTGSKHAV----LGLNKNVAAELGK 188
            A + M  +     G I+++ S+A  +G  G +  Y  SK A+    +GL K VAAE   
Sbjct: 122 EAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAE--- 178

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIRVN V P  + T +  A   E  R +         V     M     TA +VA A+L
Sbjct: 179 -GIRVNAVRPGVIYTEIH-ASGGEPGRVDR--------VKAGIPMGRGG-TAEEVARAIL 227

Query: 249 FLASDEARYISGTNLMVDGG 268
           +L SDEA Y +GT + V GG
Sbjct: 228 WLLSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  106 bits (268), Expect = 9e-28
 Identities = 74/272 (27%), Positives = 119/272 (43%), Gaps = 35/272 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT---FFCH 72
           L G+  LITG    IG + V+   + G  V  AD+      ++ +SLG E  +       
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNA----GISGAPCPDIREADLSEFEKVFDINV 128
            D+T +E +   +  + EK+G +D  VN A       G    D+   D +E      +++
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNEN---LSLHL 118

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG----------LGPHAYTGSKHAVLGL 178
              F   +  A+    Q  G +++I S+ G +              P  Y   K  ++ L
Sbjct: 119 GSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHL 178

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            K +A       IRVNCVSP     G  L + PE          F N   +  N +G  L
Sbjct: 179 TKYLAKYFKDSNIRVNCVSP-----GGILDNQPEA---------FLNAYKKCCNGKGM-L 223

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             +D+   ++FL SD+++YI+G N++VD GF+
Sbjct: 224 DPDDICGTLVFLLSDQSKYITGQNIIVDDGFS 255

Length = 256

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 1e-27
 Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 14/204 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L G+V ++TG A GIG    R  H  GAK+ + D+++     +   LGG+        D
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFH 133
           VT    + +A +  VE+FG +D++V NAGI SG     + + D   F +V D+N+ GVF 
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGS---VAQVDPDAFRRVIDVNLLGVF- 121

Query: 134 GMKHAARIMIPQ---TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
              H  R  +P     +G ++ + S+A      G  AY  SK  V      +  E+  +G
Sbjct: 122 ---HTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHG 178

Query: 191 IRVNCVSPYAVATGL---ALAHLP 211
           + V       + T L   A A LP
Sbjct: 179 VTVGSAYLSWIDTDLVRDADADLP 202

Length = 296

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score =  106 bits (265), Expect = 2e-27
 Identities = 76/250 (30%), Positives = 112/250 (44%), Gaps = 25/250 (10%)

Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQ--QVCQSLGGEPDTF 69
           ++R  GRVAL+TG + GIG +  R   +HG KV   A   D +      CQS G  P  F
Sbjct: 1   MERWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGY-PTLF 59

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
              CD++ EE + S       +   +D+ +NNAG+   P P +       ++++FD+NV 
Sbjct: 60  PYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGL-ARPEP-LLSGKTEGWKEMFDVNVL 117

Query: 130 GVFHGMKHAARIMIPQ--TKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAE 185
            +    + A + M  +    G II+I S++G         H Y  +KHAV  L + +  E
Sbjct: 118 ALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQE 177

Query: 186 L--GKYGIRVNCVSPYAVATGLALA-HLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           L   K  IR   +SP  V T  A   H  + E+                      L   D
Sbjct: 178 LREAKTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESIP------------CLKPED 225

Query: 243 VANAVLFLAS 252
           VANAVL++ S
Sbjct: 226 VANAVLYVLS 235

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  106 bits (265), Expect = 4e-27
 Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 32/280 (11%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ---SLGGEPDTFF 70
             L  +VA+ITGG   +G +  R   + GAKV         G +V +   +LGG      
Sbjct: 1   FSLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGG--RAIA 58

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG------------ISGAPCPDIREADLS 118
              DV     +  A +  V +FGT+DI++N AG                   +  + D  
Sbjct: 59  LAADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEE 118

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
            +E VFD+N+ G F   +   + M+ Q  G+II+I S+          AY+ +K AV   
Sbjct: 119 GWEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNF 178

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-NANMQGTE 237
            + +A E    G+RVN ++P    T      L   + +         +  R N  +  T 
Sbjct: 179 TQWLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGS---------YTDRSNKILGRTP 229

Query: 238 LT----ANDVANAVLFLASDEA-RYISGTNLMVDGGFTSV 272
           +       ++  A+LFLAS++A  +++G  + VDGGF++ 
Sbjct: 230 MGRFGKPEELLGALLFLASEKASSFVTGVVIPVDGGFSAY 269

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  104 bits (262), Expect = 1e-26
 Identities = 81/287 (28%), Positives = 125/287 (43%), Gaps = 41/287 (14%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPD 67
           P +  L G+VA+ITGG   +G +  +   + GAKV I D      + V   +   GGE  
Sbjct: 3   PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE-- 60

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-------------ISGAPCPDIRE 114
                 DV  +E +  A    +E FG  DI++N AG                 P     +
Sbjct: 61  ALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFD 120

Query: 115 ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA 174
            D   FE VFD+N+ G     +  A+ M+ +  G II+I S+          AY+ +K A
Sbjct: 121 LDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAA 180

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER----TEDAMVGFRNFVAR- 229
           +    + +A    K GIRVN     A+A G  L    E+ R     ED      +   R 
Sbjct: 181 ISNFTQWLAVHFAKVGIRVN-----AIAPGFFLT---EQNRALLFNEDG-----SLTERA 227

Query: 230 NANMQGTEL----TANDVANAVLFLASDEA-RYISGTNLMVDGGFTS 271
           N  +  T +       ++   +L+LA ++A  +++G  L VDGGF++
Sbjct: 228 NKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSA 274

Length = 278

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 2e-26
 Identities = 83/256 (32%), Positives = 118/256 (46%), Gaps = 17/256 (6%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC--HCDVT 76
           +V LITG + GIG +T  L    G  V I   +D    +             C    DV 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E DV +  D     FG LD +VNNAGI  AP   + + D +   ++FD NV G +   +
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIV-APSMPLADMDAARLRRMFDTNVLGAYLCAR 121

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLG-PHAY---TGSKHAVLGLNKNVAAELGKYGIR 192
            AAR +     G   +I +V+     LG P+ Y    GSK AV  L   +A ELG +G+R
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVR 181

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V P  + T +   H    +    A +G +  + R          A++VA  +++L S
Sbjct: 182 VNAVRPGLIETEI---HASGGQPGRAARLGAQTPLGRAG-------EADEVAETIVWLLS 231

Query: 253 DEARYISGTNLMVDGG 268
           D A Y++G  L V GG
Sbjct: 232 DAASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  102 bits (257), Expect = 2e-26
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 5/191 (2%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +VAL+TG + GIG    R   + G +V +        + +        D      D    
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRN---PEDLAALSASGGDVEAVPYDARDP 57

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           ED  + VD   ++FG +D++V+NAGI       +RE   +E E  F INV       +  
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAGIGRPT--TLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
              +     G ++ + S++G     G   Y+ SK A+  L   +  E   +G+RV+ V P
Sbjct: 116 LPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCP 175

Query: 199 YAVATGLALAH 209
             V T +A   
Sbjct: 176 GFVDTPMAQGL 186

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score =  103 bits (260), Expect = 3e-26
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 23/211 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVC--QSLGGEPDTFF 70
           +   G+VA+ITG A+G G +  R+    G K+ +ADVQ D L + V   ++ G E     
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGV- 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVK 129
              DV+    V +  D  +E+FG + ++ NNAG+ +G     + E  L+++E V  +N+ 
Sbjct: 61  -RTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGL---VWENSLADWEWVLGVNLW 116

Query: 130 GVFHGMKHAARIMI------PQTKGTIISICSVAGAIGGLGPHA---YTGSKHAVLGLNK 180
           GV HG++    +M+      P  +G I++  S+A   G L P A   Y  SKHAV+ L +
Sbjct: 117 GVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA---GLLAPPAMGIYNVSKHAVVSLTE 173

Query: 181 NVAAELGKYGIRVNC--VSPYAVATGLALAH 209
            +  +L     +V    + PY V TG+  + 
Sbjct: 174 TLYQDLSLVTDQVGASVLCPYFVPTGIWQSE 204

Length = 287

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  102 bits (255), Expect = 5e-26
 Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 34/267 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF-FCH-- 72
           + G++ L+TGG+ GIG    + F + GA+V I+  +     + C     E   +  C   
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARK----AEACADAAEELSAYGECIAI 59

Query: 73  -CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             D++ EE + + V    E+   LD++VNNAG + GAP     E+    ++KV DINVK 
Sbjct: 60  PADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESG---WDKVMDINVKS 116

Query: 131 VFHGMKHAARIMIPQTK--------GTIISICSVAGAIG-GLGPHAYTGSKHAVLGLNKN 181
           VF       + ++P  +          +I+I S+AG +  GL  ++Y  SK AV  L + 
Sbjct: 117 VF----FLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRK 172

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +A EL    I VN ++P    + +  A L  +    +A         ++  + G      
Sbjct: 173 LAKELAGEHITVNAIAPGRFPSKM-TAFLLNDPAALEA-------EEKSIPL-GRWGRPE 223

Query: 242 DVANAVLFLASDEARYISGTNLMVDGG 268
           D+A   + LAS    Y++G  + VDGG
Sbjct: 224 DMAGLAIMLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score =  101 bits (254), Expect = 6e-26
 Identities = 77/255 (30%), Positives = 111/255 (43%), Gaps = 28/255 (10%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+  L+ GG+ GIG + VR F   GA V          +   + L  E        D   
Sbjct: 6   GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS---KDAAERLAQETGATAVQTDSAD 62

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            + V   V     K G LDI+V NAGI  A   D  E D  + +++F IN+   +H    
Sbjct: 63  RDAVIDVVR----KSGALDILVVNAGI--AVFGDALELDADDIDRLFKINIHAPYHASVE 116

Query: 138 AARIMIPQTKGTIISICSVAG---AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           AAR M     G II I SV G    + G+   AY  SK A+ G+ + +A + G  GI +N
Sbjct: 117 AARQMPE--GGRIIIIGSVNGDRMPVAGMA--AYAASKSALQGMARGLARDFGPRGITIN 172

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V P  + T    A+ P ++     M      + R+           +VA  V +LA  E
Sbjct: 173 VVQPGPIDTDANPANGPMKDMMHSFMA-----IKRHG-------RPEEVAGMVAWLAGPE 220

Query: 255 ARYISGTNLMVDGGF 269
           A +++G    +DG F
Sbjct: 221 ASFVTGAMHTIDGAF 235

Length = 237

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 7e-26
 Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 27/266 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDTFFCHCD 74
           L G+VAL+TG ++G+G    ++  + GAKV +A  + + L +   +             D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAP-CPDIREADLSEFEKVFDINVKGVFH 133
           VT  + + +AV     + GT+DI+VNN+G+S      D+  AD   F+ VFD N +G F 
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPAD---FDFVFDTNTRGAFF 123

Query: 134 GMKHAARIMI--------PQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVA 183
             +  A+ MI         +  G II+I SVAG   +  +G   Y  SK AV+ + + +A
Sbjct: 124 VAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG--LYCMSKAAVVHMTRAMA 181

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E G++GI VN + P  + T +   H   E+  +   +  R  V +            D+
Sbjct: 182 LEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGK----------PEDL 231

Query: 244 ANAVLFLASDEARYISGTNLMVDGGF 269
              +L LA+DE+++I+G  +  D GF
Sbjct: 232 DGLLLLLAADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  101 bits (254), Expect = 9e-26
 Identities = 80/253 (31%), Positives = 114/253 (45%), Gaps = 14/253 (5%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           GRVAL+TG A GIG          G +V +AD+    G +V ++LG   + +F   DV  
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG--ENAWFIAMDVAD 67

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E  V + V   + +FG LD +V NA I+      +    L+ + +V  +N+ G     KH
Sbjct: 68  EAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKH 127

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
            A  +     G I+++ S           AY  SK  +L L   +A  LG   IRVN VS
Sbjct: 128 CAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVS 185

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P     G   A  P + R E       +     A   G   T  DVA  V +L S +A +
Sbjct: 186 P-----GWIDARDPSQRRAEPLSE--ADHAQHPAGRVG---TVEDVAAMVAWLLSRQAGF 235

Query: 258 ISGTNLMVDGGFT 270
           ++G   +VDGG T
Sbjct: 236 VTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 1e-25
 Identities = 66/207 (31%), Positives = 96/207 (46%), Gaps = 14/207 (6%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQQVC--QSLGGEPDTFFCHCD 74
            +V +ITG + G+G +T R F + GAKV  +A  ++ L       ++ GGE        D
Sbjct: 8   RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEA--LAVVAD 65

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           V   E V +A D   E+ G +D  VNNA ++   P  D+      EF +V ++   GV H
Sbjct: 66  VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPE---EFRRVTEVTYLGVVH 122

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL--GKYGI 191
           G   A R M P+ +G II + S           AY  +KHA+ G   ++  EL      +
Sbjct: 123 GTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPV 182

Query: 192 RVNCVSPYAVAT---GLALAHLPEEER 215
            V  V P AV T     A + LP E +
Sbjct: 183 SVTMVQPPAVNTPQFDWARSRLPVEPQ 209

Length = 334

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  101 bits (252), Expect = 2e-25
 Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 7/257 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-C 73
           R  G+V ++TG A GIG          GA+V + D +  L  +V   +    D    H  
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVD-RSELVHEVLAEILAAGDAAHVHTA 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+         V   VE+FG +D+++NN G            +  + E     ++     
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVG-GTIWAKPYEHYEEEQIEAEIRRSLFPTLW 118

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +     M+ + +G I+++ S+A    G+    Y+ +K  V  L  ++A E  + GIRV
Sbjct: 119 CCRAVLPHMLERQQGVIVNVSSIA--TRGIYRIPYSAAKGGVNALTASLAFEHARDGIRV 176

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV--ARNANMQGTELTANDVANAVLFLA 251
           N V+P                 +E   V ++  V    ++++ G   T ++   A+LFLA
Sbjct: 177 NAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAILFLA 236

Query: 252 SDEARYISGTNLMVDGG 268
           SDEA YI+GT L V GG
Sbjct: 237 SDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 2e-25
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 15/260 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLG--QQVCQSLGGEPDTFFCH 72
           L G+V +++G   G+G +      + GA V + A   + L         LG         
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGR--RALAVP 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+T E+   + V L +E+FG +D +VNNA         + +AD + +  V ++NV G  
Sbjct: 61  TDITDEDQCANLVALALERFGRVDALVNNAFRVP-SMKPLADADFAHWRAVIELNVLGTL 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +  A    + ++ G+I+ I S+          AY  +K A+L  ++++A ELG  GIR
Sbjct: 120 R-LTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIR 178

Query: 193 VNCVSP---YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVL 248
           VN V+P   +         H   +       +    +    AN     L T ++VA+AVL
Sbjct: 179 VNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQI----YAETAANSDLKRLPTDDEVASAVL 234

Query: 249 FLASDEARYISGTNLMVDGG 268
           FLASD AR I+G  L V+ G
Sbjct: 235 FLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score =  100 bits (250), Expect = 3e-25
 Identities = 68/280 (24%), Positives = 108/280 (38%), Gaps = 63/280 (22%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           +ITG A+GIG +T  L    G  V   D+++                     D++  E  
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLREA----------------DVIADLSTPEGR 46

Query: 82  CSAV-DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
            +A+ D+     G LD +VN AG+ G     +          V  +N  G+   M+    
Sbjct: 47  AAAIADVLARCSGVLDGLVNCAGVGGTTVAGL----------VLKVNYFGLRALMEALLP 96

Query: 141 IMIPQTKGTIISICSVAGAIGG-----------------------LGPH----AYTGSKH 173
            +        + + S+AGA                                  AY GSK 
Sbjct: 97  RLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKE 156

Query: 174 AV-LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
           A+ +   +  A  L   G+RVN V+P  V T + L    ++ R  +++  F   + R A 
Sbjct: 157 ALTVWTRRRAATWLYGAGVRVNTVAPGPVETPI-LQAFLQDPRGGESVDAFVTPMGRRA- 214

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
                   +++A  + FLASD A +I+G NL VDGG  + 
Sbjct: 215 ------EPDEIAPVIAFLASDAASWINGANLFVDGGLDAS 248

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 99.1 bits (247), Expect = 9e-25
 Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 18/257 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC-- 73
           L G+  LITG A GIG        ++GA++ I D+     +     L  E      H   
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAP 64

Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGV 131
            +VT +++V +A++   +  G +D+++NNAGI    P  +  E +   +  V  +N   V
Sbjct: 65  FNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQE---WNDVIAVNQTAV 121

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   +  AR M+ +  G II+ICS+   +G      Y  SK AV  L + +  EL ++ I
Sbjct: 122 FLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNI 181

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           +VN ++P    T +  A + +E  T  A +  R   AR  + Q  EL       A +FL+
Sbjct: 182 QVNGIAPGYFKTEMTKALVEDEAFT--AWLCKRTPAARWGDPQ--ELIG-----AAVFLS 232

Query: 252 SDEARYISGTNLMVDGG 268
           S  + +++G  L VDGG
Sbjct: 233 SKASDFVNGHLLFVDGG 249

Length = 254

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 98.7 bits (246), Expect = 2e-24
 Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 24/262 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGGEPDTFFCHCD 74
            VA++TG + GIG +        G  + I D+ D            + G     F    D
Sbjct: 2   PVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYF--QAD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           + +  D  + +D   E FG LD +VNNAGI+  P  D+ +     F+++  IN++G F  
Sbjct: 60  IGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFL 119

Query: 135 MKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +  AR M+ Q         +II + S+   +       Y  SK  +    + +A  L  
Sbjct: 120 TQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLAD 179

Query: 189 YGIRVNCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            GI V+ + P  + T +      + +E     +V  R    R            D+A AV
Sbjct: 180 EGIAVHEIRPGLIHTDMTAPVKEKYDELIAAGLVPIR----RWGQ-------PEDIAKAV 228

Query: 248 LFLASDEARYISGTNLMVDGGF 269
             LAS    Y +G  + +DGG 
Sbjct: 229 RTLASGLLPYSTGQPINIDGGL 250

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.3 bits (245), Expect = 2e-24
 Identities = 72/264 (27%), Positives = 115/264 (43%), Gaps = 34/264 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTF 69
           L  +V ++TG   GIG +      K G+ V +       ++ + L  ++ +  GGE    
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETL--KMVKENGGE--GI 59

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DV+  E   +    T++++G  DI+VNNAG+ G   P +   D    +K    + K
Sbjct: 60  GVLADVSTREGCETLAKATIDRYGVADILVNNAGL-GLFSPFL-NVDDKLIDKHISTDFK 117

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            V +  +  A+ M  +  G I++I SVAG     G   Y   K AV+ L K +A EL   
Sbjct: 118 SVIYCSQELAKEM--REGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPK 175

Query: 190 GIRVNCVSPYAVATGLA-----LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
            IRVN ++P  V T L      +  + E+E             A    + G  L   +VA
Sbjct: 176 -IRVNAIAPGFVKTKLGESLFKVLGMSEKE------------FAEKFTLMGKILDPEEVA 222

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
             V  +   E+  I+G   ++D G
Sbjct: 223 EFVAAILKIES--ITGQVFVLDSG 244

Length = 252

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 98.0 bits (245), Expect = 2e-24
 Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 31/209 (14%)

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR------EADLSEFEKVFDI 126
            DVT +ED+    +   E  G +D +V++  +S    P+IR      +     F K  DI
Sbjct: 51  LDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMS----PEIRKGKPYLDTSREGFLKALDI 106

Query: 127 NVKGVFHGM-KHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVA 183
           +    F  + K A  +M     G+I+++  +A      G G      +K A+  L + +A
Sbjct: 107 SAYS-FISLAKAAKPLMNE--GGSIVALSYIAAERVFPGYG--GMGVAKAALESLARYLA 161

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTAN 241
            ELG+ GIRVN +S     T                + GF   V     M   G   +A 
Sbjct: 162 YELGRKGIRVNTISAGPTKT-----------TAGSGIGGFDKMVEYAEEMAPLGRNASAE 210

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFT 270
           +VANA  FL SD AR I+G  L VDGGF+
Sbjct: 211 EVANAAAFLLSDLARGITGQILYVDGGFS 239

Length = 239

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 97.7 bits (244), Expect = 3e-24
 Identities = 83/272 (30%), Positives = 116/272 (42%), Gaps = 54/272 (19%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCH 72
            +VALITGGA  IG +  R  H  G +V I     A   D L  ++       P +    
Sbjct: 6   AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNA---LRPGSAAAL 62

Query: 73  CDVTKEEDVCSA-VDLTVEKFGTLDIMVNNAGISGAPCP--DIREADLSEFEKVFDINVK 129
                + D     V   V  FG LD +VNNA  S  P P   I EA   +   +F  N+K
Sbjct: 63  QADLLDPDALPELVAACVAAFGRLDALVNNAS-SFYPTPLGSITEAQWDD---LFASNLK 118

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA---------YTGSKHAVLGLNK 180
             F  +  AA   + + +G I++I  +         HA         Y  +K A+  L +
Sbjct: 119 APFF-LSQAAAPQLRKQRGAIVNITDI---------HAERPLKGYPVYCAAKAALEMLTR 168

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-- 238
           ++A EL    +RVN V+P A+         PE+  + D         AR A +  T L  
Sbjct: 169 SLALELAP-EVRVNAVAPGAIL-------WPEDGNSFDE-------EARQAILARTPLKR 213

Query: 239 --TANDVANAVLFLASDEARYISGTNLMVDGG 268
             T  D+A AV FL   +A +I+G  L VDGG
Sbjct: 214 IGTPEDIAEAVRFLL-ADASFITGQILAVDGG 244

Length = 249

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 98.2 bits (245), Expect = 3e-24
 Identities = 86/281 (30%), Positives = 127/281 (45%), Gaps = 52/281 (18%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---------GQQVCQ---SLGGE 65
           GRV ++TG   GIG +    F   GA+V + D+   L          Q V     + GGE
Sbjct: 6   GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE 65

Query: 66  P--DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FE 121
              +      D+   +   + VD  VE FG LD++VNNAGI      D   A++SE  ++
Sbjct: 66  AVANG----DDIADWDGAANLVDAAVETFGGLDVLVNNAGI----LRDRMIANMSEEEWD 117

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAV 175
            V  +++KG F  ++HAA     ++K        II+  S AG  G +G   Y+ +K  +
Sbjct: 118 AVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGI 177

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYA----VATGLALAHLPEEERTEDAMVGFRNFVARNA 231
             L    AAELG+YG+ VN ++P A      T  A      EE   DAM           
Sbjct: 178 AALTLVAAAELGRYGVTVNAIAPAARTRMTETVFAEMMAKPEEGEFDAM----------- 226

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
                     +V+  V++L S E+R ++G    V+GG  SV
Sbjct: 227 -------APENVSPLVVWLGSAESRDVTGKVFEVEGGKISV 260

Length = 286

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 97.7 bits (244), Expect = 4e-24
 Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 21/193 (10%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +VAL+TG ++GIG +T     + G +V     ++             P       DVT +
Sbjct: 5   KVALVTGASSGIGRATAEKLARAGYRV-FGTSRNPARAA------PIPGVELLELDVTDD 57

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             V +AVD  + + G +D++VNNAG+   GA      E+ +++ + +FD NV G+    +
Sbjct: 58  ASVQAAVDEVIARAGRIDVLVNNAGVGLAGA----AEESSIAQAQALFDTNVFGILRMTR 113

Query: 137 HAARIMIPQTKGTIISICSVAGAI----GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                M  Q  G II+I SV G +      L    Y  SKHAV G ++++  E+ ++GIR
Sbjct: 114 AVLPHMRAQGSGRIINISSVLGFLPAPYMAL----YAASKHAVEGYSESLDHEVRQFGIR 169

Query: 193 VNCVSPYAVATGL 205
           V+ V P    T  
Sbjct: 170 VSLVEPAYTKTNF 182

Length = 270

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 97.3 bits (243), Expect = 5e-24
 Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 28/263 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGGEPDTFFCHC 73
              G+  ++ GG +GI     + F + GA V +A   Q+ +   V Q     P+      
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA----PCPDIREADLSE--FEKVFDIN 127
           DV     V +A     ++FG +D++V     SGA    P P    A +S   F+ V DI+
Sbjct: 66  DVRDYAAVEAAFAQIADEFGPIDVLV-----SGAAGNFPAP---AAGMSANGFKTVVDID 117

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           + G F+ +K A  ++  +   +II I +    +          +K  V  L + +A E G
Sbjct: 118 LLGTFNVLKAAYPLL-RRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWG 176

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVAN 245
             GIRVN + P  +A    +A L      + A       VA++  ++  GT     D+AN
Sbjct: 177 PEGIRVNSIVPGPIAGTEGMARLAPSPELQAA-------VAQSVPLKRNGT---KQDIAN 226

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
           A LFLASD A YI+G  L VDGG
Sbjct: 227 AALFLASDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 96.8 bits (241), Expect = 7e-24
 Identities = 82/258 (31%), Positives = 116/258 (44%), Gaps = 15/258 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDV 75
            VAL+TG  +GIG +  R   K G +V + A  ++ L   V   +  G E D     CDV
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADG--RTCDV 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
               ++ + V   V ++G +D++VNNAG SG       E     +  V + N+ GVF   
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNNAGRSGGG--ATAELADELWLDVVETNLTGVFRVT 119

Query: 136 KH--AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           K    A  M+ +  G II+I S  G  G +    Y+ SKH V+G  K +  EL + GI V
Sbjct: 120 KEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 179

Query: 194 NCVSPYAVATGLAL---AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           N V P  V T +A     H  +          F    AR     G  +T  +VA  V +L
Sbjct: 180 NAVCPGFVETPMAASVREHYADIWEVSTEEA-FDRITARVP--LGRYVTPEEVAGMVAYL 236

Query: 251 ASDEARYISGTNLMVDGG 268
             D A  ++   L V GG
Sbjct: 237 IGDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 96.0 bits (239), Expect = 1e-23
 Identities = 76/266 (28%), Positives = 112/266 (42%), Gaps = 24/266 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGGEPDTFFCHC 73
           RL  +VA++TG   G+G +    F + GA V IA   +  L +   Q             
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA 66

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVF 132
           D+   E         VE FG LDI+VNN G +   P       DL++    F  NV    
Sbjct: 67  DLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLAD---AFTFNVATAH 123

Query: 133 HGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
                A  +M+  +  G++I+I S  G + G G  AY  +K A+    +  A +L    I
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPR-I 182

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
           RVN ++P ++ T  AL  +   +     M             + T L       D+A A 
Sbjct: 183 RVNAIAPGSILTS-ALEVVAANDELRAPME------------KATPLRRLGDPEDIAAAA 229

Query: 248 LFLASDEARYISGTNLMVDGGFTSVN 273
           ++LAS    Y++G  L VDGG T  N
Sbjct: 230 VYLASPAGSYLTGKTLEVDGGLTFPN 255

Length = 263

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 11/192 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLG--QQVCQSLGGEPDTFFCHCDV 75
             ALITG ++GIG++T   F K G  +  +A  QD L       +S G +   +    D+
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAY--SIDL 64

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  E +   +   +E+FG  D+++NNAG+  A    + E  LS+++ V  +N+  VF   
Sbjct: 65  SNPEAIAPGIAELLEQFGCPDVLINNAGM--AYTGPLLEMPLSDWQWVIQLNLTSVFQCC 122

Query: 136 KHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
                 M  +  G II++ S+A   A    G  AY  SK A+    K +A E   +GIRV
Sbjct: 123 SAVLPGMRARGGGLIINVSSIAARNAFPQWG--AYCVSKAALAAFTKCLAEEERSHGIRV 180

Query: 194 NCVSPYAVATGL 205
             ++  AV T L
Sbjct: 181 CTITLGAVNTPL 192

Length = 241

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 95.2 bits (237), Expect = 2e-23
 Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 14/190 (7%)

Query: 23  ITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC---DVTKEE 79
           ITG A+GIG  T  LF ++G  V + D+ ++    +   LG E           DVT   
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAEN----VVAGALDVTDRA 60

Query: 80  DVCSAV-DLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              +A+ D      G LD + NNAG+  G P  D+  A     +++ DINVKGV +G  +
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAH---DRMVDINVKGVLNGA-Y 116

Query: 138 AARIMIPQTKGT-IISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           AA   +  T G  +I+  S +   G      Y+ +K AV GL + +  E  ++GIRV  V
Sbjct: 117 AALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADV 176

Query: 197 SPYAVATGLA 206
            P+ V T + 
Sbjct: 177 WPWFVDTPIL 186

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 96.0 bits (239), Expect = 2e-23
 Identities = 85/265 (32%), Positives = 118/265 (44%), Gaps = 18/265 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQ--SLGGEPDTFFCH 72
              R  L+TGG +GIG+         GA V I     D L     +  +L G     +  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT E+ V  AVD      G L  +V+ AG S    P I + D   + +  D+NV G  
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGP-ITQIDSDAWRRTVDLNVNGTM 123

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           + +KHAAR ++    G+ + I S+A +       AY  +K AV  L K  A ELG   +R
Sbjct: 124 YVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVR 183

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN + P  + T L        E + D       + A     +  E+   DVAN  +FL S
Sbjct: 184 VNSIRPGLIRTDLVAPITESPELSAD-------YRACTPLPRVGEVE--DVANLAMFLLS 234

Query: 253 DEARYISGTNLMVDGGFTSVNHSLR 277
           D A +I+G  + VDGG     H LR
Sbjct: 235 DAASWITGQVINVDGG-----HMLR 254

Length = 276

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 95.1 bits (237), Expect = 2e-23
 Identities = 66/192 (34%), Positives = 94/192 (48%), Gaps = 13/192 (6%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQV--CQSLGGEPDTFFCHCDV 75
           +V +ITG ++GIG +T   F + GAK V  A   + L +     + LGGE        DV
Sbjct: 1   QVVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGE--AIAVVADV 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVFH 133
                V  A D  VE+FG +D  VNNAG++  G       +    EF +VFD+N  G  +
Sbjct: 59  ADAAQVERAADTAVERFGRIDTWVNNAGVAVFGR----FEDVTPEEFRRVFDVNYLGHVY 114

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG--I 191
           G   A   +  +  G +I++ S+ G        AY+ SKHAV G  +++ AEL   G  I
Sbjct: 115 GTLAALPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPI 174

Query: 192 RVNCVSPYAVAT 203
            V  V P A+ T
Sbjct: 175 SVTLVQPTAMNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 94.7 bits (236), Expect = 3e-23
 Identities = 68/259 (26%), Positives = 105/259 (40%), Gaps = 34/259 (13%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTFFCH 72
            VAL+TG A  IG +        G +V +      A+ Q    +    +L          
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQR--LKDELNALRNS--AVLVQ 56

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++        V      FG  D++VNNA         + +     + ++F IN+K  +
Sbjct: 57  ADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYP--TPLGQGSEDAWAELFGINLKAPY 114

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGI 191
             ++  AR +     G+II+I   A     L  + AY  SK A+ GL ++ A EL    I
Sbjct: 115 LLIQAFARRLAGSRNGSIINII-DAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-I 172

Query: 192 RVNCVSPYAVATGLAL--AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           RVN ++P     GL L    +  E R            A          +A ++A+AV+F
Sbjct: 173 RVNGIAP-----GLILLPEDMDAEYREN----------ALRKVPLKRRPSAEEIADAVIF 217

Query: 250 LASDEARYISGTNLMVDGG 268
           L      YI+G  + VDGG
Sbjct: 218 LLDS--NYITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 94.4 bits (235), Expect = 3e-23
 Identities = 79/255 (30%), Positives = 117/255 (45%), Gaps = 32/255 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVC-IA-DVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           R  L+TG   GIG +        G +V  IA    D+            P   F  CD+ 
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF-----------PGELFA-CDLA 51

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             E   + +    E    +D +VNN GI+  P P + + DL+  + V+D+NV+      +
Sbjct: 52  DIEQTAATLAQINEIHP-VDAIVNNVGIA-LPQP-LGKIDLAALQDVYDLNVRAAVQVTQ 108

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
                M  + +G I++ICS A   G L   +Y+ +K A++G  +  A EL +YGI VN V
Sbjct: 109 AFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAV 167

Query: 197 SPYAVATGLALAHLP---EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           +P  + T L     P   EEE+   A +  R              T  +VA A+ FL SD
Sbjct: 168 APGPIETELFRQTRPVGSEEEKRVLASIPMRRLG-----------TPEEVAAAIAFLLSD 216

Query: 254 EARYISGTNLMVDGG 268
           +A +I+G  L VDGG
Sbjct: 217 DAGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 94.0 bits (234), Expect = 8e-23
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 29/262 (11%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQ--QVCQSLGGEPDTFFCHCD 74
            +V +ITGG++G+G++  + F + GA V I    ++ L +     +   G+  T     D
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTV--QMD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVF 132
           V   EDV   V+   EKFG +D ++NNA      CP     DLS   +  V DI + G F
Sbjct: 59  VRNPEDVQKMVEQIDEKFGRIDALINNAA-GNFICP---AEDLSVNGWNSVIDIVLNGTF 114

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYG 190
           +  +   +  I +  KG II++ +      G G      +K  VL + + +A E G KYG
Sbjct: 115 YCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYG 174

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           IRVN ++P  +            ERT  A   + +  A    +Q   L    T  ++A  
Sbjct: 175 IRVNAIAPGPI------------ERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGL 222

Query: 247 VLFLASDEARYISGTNLMVDGG 268
             FL SDEA YI+GT + +DGG
Sbjct: 223 AYFLLSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 93.9 bits (234), Expect = 8e-23
 Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 27/268 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           QR  G+V ++TG A GIG          GA+V + D  + + +   +      +      
Sbjct: 4   QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTA 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK---VFDINVKG 130
           D+       +A+   VE FG +D+++NN G  G     I      E+E+     +I  + 
Sbjct: 64  DLETYAGAQAAMAAAVEAFGRIDVLINNVG--GT----IWAKPFEEYEEEQIEAEIR-RS 116

Query: 131 VFHG--MKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           +F       A    M+ Q  G I+++ S+A    G+    Y+ +K  V  L  ++A E  
Sbjct: 117 LFPTLWCCRAVLPHMLAQGGGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAFEYA 174

Query: 188 KYGIRVNCVSPYAVATGLALA---HLP--EEERTEDAMVGFRNFVAR--NANMQGTELTA 240
           ++GIRVN     AVA G   A    +P     ++E     ++  V +  ++++     T 
Sbjct: 175 EHGIRVN-----AVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTI 229

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
           ++   A+LFLASDEA YI+GT L V GG
Sbjct: 230 DEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.9 bits (234), Expect = 8e-23
 Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 24/263 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLGGEPDTFFCHCD 74
            VAL+TGG  GIG    R     G  + I D  D+      QQ  ++LG E    F   D
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE--VIFFPAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V       + +D     +G +D +VNNAG+      D+ +     F++V  IN++G F  
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFL 120

Query: 135 MKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +  A+ M+ Q +       +I+ + SV   +       Y  SK  +    +  AA L +
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAE 180

Query: 189 YGIRVNCVSPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            GI V  V P  + T + A      +      +V    +        G      DVA AV
Sbjct: 181 EGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRW--------G---EPEDVARAV 229

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
             LAS +  Y +G  + VDGG +
Sbjct: 230 AALASGDLPYSTGQAIHVDGGLS 252

Length = 256

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 90.3 bits (225), Expect = 2e-22
 Identities = 39/172 (22%), Positives = 63/172 (36%), Gaps = 10/172 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKV---CIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
              LITGG  G+G +  R     GA+               ++   L     +     CD
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V   + + + +       G LD +V+NAG+       + E     FE+V    V G ++ 
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDG--PLEELTPERFERVLAPKVTGAWNL 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
            +           G  +   SVAG +G  G   Y  +  A+  L ++  AE 
Sbjct: 119 HELTR----DLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 92.4 bits (230), Expect = 3e-22
 Identities = 80/273 (29%), Positives = 123/273 (45%), Gaps = 36/273 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDT--FFCH 72
           L GRVA++TGG++GIG +TV L  + GA V I    ++ L     +     P        
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG----APCPDIREADLSEFE-KVFDIN 127
           CDV  E DV +       +FG +D++VNNAG       A   D  +A   E E K F   
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTD--DAWRDELELKYF--- 120

Query: 128 VKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLG----PH--AYTGSKHAVLGLNK 180
              V +    A   ++  +   +I+ + S+      L     PH  A + ++  +L L K
Sbjct: 121 --SVIN-PTRAFLPLLRASAAASIVCVNSL------LALQPEPHMVATSAARAGLLNLVK 171

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-- 238
           ++A EL   G+RVN +    V +G        E R  D    +  + A  A  +G  L  
Sbjct: 172 SLATELAPKGVRVNSILLGLVESGQWRRRY--EAR-ADPGQSWEAWTAALARKKGIPLGR 228

Query: 239 --TANDVANAVLFLASDEARYISGTNLMVDGGF 269
               ++ A A+ FLAS  + Y +G+++ V GGF
Sbjct: 229 LGRPDEAARALFFLASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 92.1 bits (229), Expect = 3e-22
 Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 19/198 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA---------DVQDNLGQQV------CQ 60
           L G+VA +TG + GIG +      K GA V +A             +L   +       +
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           + GG+        DV  E+ V + V+ TV++FG LDI+VNNAG        + +     F
Sbjct: 61  AAGGQ--ALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGA--IWLSLVEDTPAKRF 116

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           + +  +N++G +   + A   M+   +G I++I          G  AY   K  +  L  
Sbjct: 117 DLMQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTL 176

Query: 181 NVAAELGKYGIRVNCVSP 198
            +AAEL ++GI VN + P
Sbjct: 177 GLAAELRRHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 90.7 bits (226), Expect = 9e-22
 Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 56/280 (20%)

Query: 18  GRVALITGGAT--GIGESTVRLFHKHGAKVCI---ADVQDNLGQQVCQSLGGEPDTFFCH 72
           G+  LITG A    I     +  H+ GA++      +      +++ + LG         
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVL--P 58

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR------EADLSEFEKVFDI 126
           CDV+ +E++        + +G LD +V+    S A  P ++      +     F K  DI
Sbjct: 59  CDVSNDEEIKELFAEVKKDWGKLDGLVH----SIAFAPKVQLKGPFLDTSRKGFLKALDI 114

Query: 127 NVKGVFHGM-KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN------ 179
           +       + K A  IM P   G+I+++             +Y GS+  V G N      
Sbjct: 115 SAYS-LVSLAKAALPIMNPG--GSIVTL-------------SYLGSERVVPGYNVMGVAK 158

Query: 180 -------KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
                  + +A ELG+ GIRVN +S   + T LA + +   ++  +       +  + A 
Sbjct: 159 AALESSVRYLAYELGRKGIRVNAISAGPIKT-LAASGITGFDKMLE-------YSEQRAP 210

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           + G  +TA +V N   FL SD +  I+G  + VDGG+  +
Sbjct: 211 L-GRNVTAEEVGNTAAFLLSDLSSGITGEIIYVDGGYHIM 249

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 93.5 bits (233), Expect = 1e-21
 Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 27/247 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFC 71
              G++ ++TG  +GIG  T   F + GA+V  +D+ +   ++     ++ G     +  
Sbjct: 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAY-- 369

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKG 130
             DV+  + + +  +    + G  DI+VNNAGI  A    D    D   +++V D+N+ G
Sbjct: 370 RVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAED---WDRVLDVNLWG 426

Query: 131 VFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           V HG +   R M+ + T G I+++ S A         AY  SK AVL L++ + AEL   
Sbjct: 427 VIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAA 486

Query: 190 GIRVNCVSPYAVATGL-ALAHLP-----EEERTE---DAMVGFRNFVARNANMQGTELTA 240
           GI V  + P  V T + A          +E R     D +   R +        G E  A
Sbjct: 487 GIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGY--------GPEKVA 538

Query: 241 NDVANAV 247
             + +AV
Sbjct: 539 KAIVDAV 545

Length = 582

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 88.9 bits (221), Expect = 4e-21
 Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 11/196 (5%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
            LITG ++GIG +  R F K G  V +A    D  D L  ++               DVT
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSV--EVEI-LDVT 57

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            EE     +     + G LD+++ NAG+  G    D+       F +  D N+ G    +
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLS---FKAFRETIDTNLLGAAAIL 114

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + A      + +G ++ I SVA   G  G  AY+ SK A+  L +++  ++ K GIRV  
Sbjct: 115 EAALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTV 174

Query: 196 VSPYAVATGLALAHLP 211
           ++P  + T L      
Sbjct: 175 INPGFIDTPLTANMFT 190

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 89.0 bits (221), Expect = 7e-21
 Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 19/217 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA--DVQDNLGQQV--CQSLGGEPDTFFC 71
           L G++AL+TG + GIG        + GA V I    +   L       ++ GG+     C
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGK-----C 55

Query: 72  H---CDVTKEEDVCSAVD-LTVEKFGTLDIMVNNA-----GISGAPCPDIREADLSEFEK 122
               CD + +++V +  + +  E+ G LDI+VNNA      I         E   + ++ 
Sbjct: 56  IPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDD 115

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           + ++ ++  +    +AA +M+   KG I+ I S  G +  L   AY   K A+  +  ++
Sbjct: 116 INNVGLRAHYACSVYAAPLMVKAGKGLIVIISST-GGLEYLFNVAYGVGKAAIDRMAADM 174

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA 219
           A EL  +G+ V  + P  V T L L    ++E +  A
Sbjct: 175 AHELKPHGVAVVSLWPGFVRTELVLEMPEDDEGSWHA 211

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 88.4 bits (219), Expect = 1e-20
 Identities = 78/279 (27%), Positives = 126/279 (45%), Gaps = 46/279 (16%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-----PDT-FFCHC 73
            A++TG A  IG S     H+ G +V +     +       +L  E     P++   C  
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVL---HYHRSAAAASTLAAELNARRPNSAVTCQA 59

Query: 74  DVTKEE---DVCSA-VDLTVEKFGTLDIMVNNAGISGAPCPDIR--EADLSEFEKVFDIN 127
           D++        C A +D     FG  D++VNNA  +  P P +R    +    +K  ++ 
Sbjct: 60  DLSNSATLFSRCEAIIDACFRAFGRCDVLVNNAS-AFYPTPLLRGDAGEGVGDKKSLEVQ 118

Query: 128 VKGVFHGMKHAARIMI-----------PQTKGTIISICSVAGAIGG---LGPHAYTGSKH 173
           V  +F     A   +I            + + T +SI ++  A+     LG   YT +KH
Sbjct: 119 VAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKH 178

Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL--AHLPEEERTEDAMVGFRNFVARNA 231
           A+ GL ++ A EL    IRVN V+P     GL+L    +P E + +     +R    R  
Sbjct: 179 ALEGLTRSAALELAPLQIRVNGVAP-----GLSLLPDAMPFEVQED-----YR----RKV 224

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
            +   E +A  +A+ V+FL S +A+YI+GT + VDGG +
Sbjct: 225 PLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS 263

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 87.8 bits (218), Expect = 2e-20
 Identities = 47/135 (34%), Positives = 63/135 (46%), Gaps = 6/135 (4%)

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGV 131
           DVT    V +AV+  VE FG LDI+VNNAG    G     I E   SE     D N  G 
Sbjct: 57  DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGM----IEEVTESEARAQIDTNFFGA 112

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
               +     +  Q  G II I S+ G         Y  SK A+ G+++ +A E+ ++GI
Sbjct: 113 LWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGI 172

Query: 192 RVNCVSPYAVATGLA 206
           +V  V P   +T  A
Sbjct: 173 KVTLVEPGGYSTDWA 187

Length = 275

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 86.7 bits (215), Expect = 3e-20
 Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 8/178 (4%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQ---QVCQSLGGEPDTFFCHCDV 75
           VA + G   G+G +  R F   G  V   A  +  L      + +  GG         D 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGG--SAKAVPTDA 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
             E++V +  DL  E+ G L+++V NAG +    P I E     FEKV+++   G F   
Sbjct: 59  RDEDEVIALFDLIEEEIGPLEVLVYNAG-ANVWFP-ILETTPRVFEKVWEMAAFGGFLAA 116

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           + AA+ M+ + +GTII   + A   G  G  A+ G+K A+  L +++A ELG  GI V
Sbjct: 117 REAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 86.4 bits (214), Expect = 4e-20
 Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 21/257 (8%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQ---SLGGEPDTFFCHCDV 75
           +AL+TGG+ GIG +T  L  + G  V +   Q+ +  Q+V       GG+   F    D+
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGK--AFVLQADI 60

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + E  V +      +    L  +VNNAGI    C  +         +V   NV G F   
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNAGILFTQC-TVENLTAERINRVLSTNVTGYFLCC 119

Query: 136 KHAARIMIPQ---TKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGI 191
           + A + M  +   + G I+++ S A  +G  G +  Y  SK A+  L   ++ E+   GI
Sbjct: 120 REAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGI 179

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVNCV P  + T         E        G  + V  N  MQ       +VA A+++L 
Sbjct: 180 RVNCVRPGFIYT---------EMHASGGEPGRVDRVKSNIPMQRGG-QPEEVAQAIVWLL 229

Query: 252 SDEARYISGTNLMVDGG 268
           SD+A Y++G+ + + GG
Sbjct: 230 SDKASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 86.2 bits (214), Expect = 7e-20
 Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 19/196 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +VAL+TG ++GIG++T R     G  V  A    D  ++L      SLG  P +     D
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-----ASLGVHPLSL----D 54

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVF 132
           VT E  + +AVD  + + G +D++VNNAG    GA    I +  + E  + F++N+ G  
Sbjct: 55  VTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGA----IEDVPIDEARRQFEVNLFGAA 110

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +     M  Q  G II+I S+ G I       Y  +K A+ G +  +  E+  +GI 
Sbjct: 111 RLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGID 170

Query: 193 VNCVSPYAVATGLALA 208
           V  + P  + T     
Sbjct: 171 VVVIEPGGIKTEWGDI 186

Length = 273

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 86.1 bits (214), Expect = 9e-20
 Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 8/183 (4%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            +  LITG ++G G +  +     G +V +  V+    +   ++L  +        DVT 
Sbjct: 4   MKTWLITGVSSGFGRALAQAALAAGHRV-VGTVRSEAARADFEALHPD-RALARLLDVTD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            + + + V      FG +D++VNNAG    GA    I E+ L+E  + F++NV G     
Sbjct: 62  FDAIDAVVADAEATFGPIDVLVNNAGYGHEGA----IEESPLAEMRRQFEVNVFGAVAMT 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K     M  + +G I++I S+ G I   G   Y GSK A+ G+++++A E+  +GI V  
Sbjct: 118 KAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTA 177

Query: 196 VSP 198
           V P
Sbjct: 178 VEP 180

Length = 277

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 85.7 bits (213), Expect = 1e-19
 Identities = 67/276 (24%), Positives = 110/276 (39%), Gaps = 51/276 (18%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  LI G A    I     +   + GA++      + L ++V +            C
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPC 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR----EADLSEFEKVFDINVK 129
           DVT +E + +      +K+G LD +V+   I+ AP  +++    +     F    DI+  
Sbjct: 64  DVTNDESIDALFATIKKKWGKLDGLVH--SIAFAPKEELKGDYLDTSREGFLIAMDISAY 121

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN---------- 179
                 K A  +M     G+I+++              Y GS+  V   N          
Sbjct: 122 SFTALAKAARPLMNN--GGSILTL-------------TYLGSERVVPNYNVMGVAKAALE 166

Query: 180 ---KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNANM 233
              + +AA+LGK GIRVN +S   + T LA +           +  FR        NA +
Sbjct: 167 ASVRYLAADLGKEGIRVNAISAGPIRT-LAAS----------GIGDFRKMLKENEANAPL 215

Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           +   +T  +V N   FL SD +  I+G  + VD G+
Sbjct: 216 RRN-VTIEEVGNTAAFLLSDLSSGITGEIIYVDSGY 250

Length = 259

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 85.5 bits (212), Expect = 1e-19
 Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 24/249 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFFCH 72
            ++A++TG ++G G  T     K G  V IA     + Q+NL  Q  Q    +       
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLV-IATMRNPEKQENLLSQATQLNLQQNIKVQ-Q 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT +  +     L +++ G +D++VNNAG +      + E  + E+ K F+ NV G  
Sbjct: 61  LDVTDQNSI-HNFQLVLKEIGRIDLLVNNAGYANGGF--VEEIPVEEYRKQFETNVFGAI 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
              +     M  Q  G II+I S++G +G  GL P  Y  SK+A+ G ++++  EL  +G
Sbjct: 118 SVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSP--YVSSKYALEGFSESLRLELKPFG 175

Query: 191 IRVNCVSP-------YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
           I V  + P       + V   LA          ++ M   +  +   ++  G      DV
Sbjct: 176 IDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFG---NPIDV 232

Query: 244 ANAVLFLAS 252
           AN ++ +A 
Sbjct: 233 ANLIVEIAE 241

Length = 280

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 83.9 bits (208), Expect = 3e-19
 Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 9/192 (4%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEE 79
            LITG + GIG   VR     G    IA  +D        +LG           DVT E 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 80  DVCSAVDLTVEKFGT--LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
               + +   E+ G   LD+++NNAGI  +  P   E D  +  +VF +NV G     + 
Sbjct: 61  A--ESAEAVAERLGDAGLDVLINNAGILHSYGP-ASEVDSEDLLEVFQVNVLGPLLLTQA 117

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGP---HAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              +++   +  II+I S  G+IG       ++Y  SK A+  L K++A EL + GI V 
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITVV 177

Query: 195 CVSPYAVATGLA 206
            + P  V T + 
Sbjct: 178 SLHPGWVRTDMG 189

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 83.2 bits (205), Expect = 8e-19
 Identities = 81/268 (30%), Positives = 130/268 (48%), Gaps = 27/268 (10%)

Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPD 67
           ++ L G+VAL+TG + GIG +        GA V I         D   +++ +S GG+  
Sbjct: 1   MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI-ESNGGK-- 57

Query: 68  TFFCHCDVTKEEDVCSAVD-LTVE---KFGT--LDIMVNNAGISGAPCPDIREADLSEFE 121
            F    D+   + V   V+ L  E   + GT  +DI+VNNAGI       I       F+
Sbjct: 58  AFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGT--IENTTEEIFD 115

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           ++  +N+K  F  ++    ++  + +G +I+I S    +G  G  AY  SK A+  +   
Sbjct: 116 EIMAVNIKAPFFLIQQTLPLL--RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLP 173

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +A  LG+ GI VN + P    T +    L + E         RNF A N+++ G      
Sbjct: 174 LAKHLGERGITVNTIMPGYTKTDINAKLLDDPE--------IRNF-ATNSSVFGRIGQVE 224

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGF 269
           D+A+AV FLAS ++R+++G  + V GGF
Sbjct: 225 DIADAVAFLASSDSRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 9e-19
 Identities = 78/272 (28%), Positives = 119/272 (43%), Gaps = 29/272 (10%)

Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCI--------ADVQDNLGQQVCQSL 62
           A   L G+V LI GGA  +G    R     GAK V I        AD ++ +     ++ 
Sbjct: 2   ADHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVA--AVKAA 59

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFE 121
           G +   F    D+T    V    D     FG  DI +N  G +   P  +I EA   E++
Sbjct: 60  GAKAVAF--QADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEA---EYD 114

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISIC-SVAGAIGGLGPHAYTGSKHAVLGLNK 180
           ++F +N K  F  +K A R +     G I+++  S+ GA       AY GSK  V    +
Sbjct: 115 EMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAFTP-FYSAYAGSKAPVEHFTR 171

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT- 239
             + E G  GI V  V P  + T       P+E    +A V +    A  +    T LT 
Sbjct: 172 AASKEFGARGISVTAVGPGPMDTPF---FYPQE--GAEA-VAYHKTAAALSPFSKTGLTD 225

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
             D+   + FL +D   +I+G  ++++GG+T+
Sbjct: 226 IEDIVPFIRFLVTD-GWWITGQTILINGGYTT 256

Length = 257

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.5 bits (210), Expect = 1e-18
 Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 51/270 (18%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---QDNLGQQVCQSLGGEPDTFFCH 72
           L G+VAL+TG A GIG +   +  + GA V   DV    + L   V   +GG        
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEAL-AAVANRVGGTA----LA 262

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVK- 129
            D+T  +      +   E+ G LDI+V+NAGI+     D   A++ E  ++ V  +N+  
Sbjct: 263 LDITAPDAPARIAEHLAERHGGLDIVVHNAGIT----RDKTLANMDEARWDSVLAVNLLA 318

Query: 130 -----------GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
                      G                 G I+ + S++G  G  G   Y  SK  V+GL
Sbjct: 319 PLRITEALLAAGALGDG------------GRIVGVSSISGIAGNRGQTNYAASKAGVIGL 366

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-MQGTE 237
            + +A  L + GI +N V+P  + T +  A +P   R             R  N +Q   
Sbjct: 367 VQALAPLLAERGITINAVAPGFIETQMT-AAIPFATRE----------AGRRMNSLQQGG 415

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDG 267
           L   DVA  + +LAS  +  ++G  + V G
Sbjct: 416 LPV-DVAETIAWLASPASGGVTGNVVRVCG 444

Length = 450

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 82.7 bits (204), Expect = 1e-18
 Identities = 63/191 (32%), Positives = 96/191 (50%), Gaps = 6/191 (3%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVT 76
           GR A+ITGGA+GIG +T   F + GA+V + DV     +Q    L  E  D     CDV 
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
             E+V    D      G +D++ +NAGI  G P  ++   D   +  V D+++ G  H +
Sbjct: 66  HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDD---WRWVIDVDLWGSIHTV 122

Query: 136 K-HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +    R++   T G ++   S AG +   G  AY  +K+ V+GL + +A E+   GI V+
Sbjct: 123 EAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVS 182

Query: 195 CVSPYAVATGL 205
            + P  V T L
Sbjct: 183 VLCPMVVETNL 193

Length = 275

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 13/187 (6%)

Query: 23  ITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC---DVTKEE 79
           ITG ++GIG++  R + + GA + +   + +  Q     L              DV   +
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAAR---VSVYAADVRDAD 63

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREA-DLSEFEKVFDINVKGVFHGMKH 137
            + +A    +   G  D+++ NAGIS G       E  DL+ F +V D N  G+    + 
Sbjct: 64  ALAAAAADFIAAHGLPDVVIANAGISVGT---LTEEREDLAVFREVMDTNYFGMVATFQP 120

Query: 138 AARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               M    +GT++ I SVAG + GL G  AY+ SK A +   +++  EL   G+RV  +
Sbjct: 121 FIAPMRAARRGTLVGIASVAG-VRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTI 179

Query: 197 SPYAVAT 203
           +P  + T
Sbjct: 180 APGYIRT 186

Length = 257

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 80.7 bits (200), Expect = 3e-18
 Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 11/192 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSL---GGEPDTFFCHCD 74
           +VAL+TG   GIG   VR   K G    I   +D   GQ   + L   G      F   D
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVR--FHQLD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT +  + +A D   EK+G LDI+VNNAGI+     D       +  +    N  G    
Sbjct: 59  VTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTP-TREQARETMKTNFFGTVDV 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +    ++     G I+++ S  G++      AY  SK A+  L + +A EL + GI+VN
Sbjct: 118 TQALLPLLKKSPAGRIVNVSSGLGSLTS----AYGVSKAALNALTRILAKELKETGIKVN 173

Query: 195 CVSPYAVATGLA 206
              P  V T + 
Sbjct: 174 ACCPGWVKTDMG 185

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 81.2 bits (201), Expect = 4e-18
 Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 13/192 (6%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQ--SLGGEPDTFFCH--CDV 75
             +TG A+GIG +T       GA++ + D   D L Q V    +LGG   T   H   D+
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG---TVPEHRALDI 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  + V +         G++D+++N AGIS     D    +  ++ ++ D+N+ G  H +
Sbjct: 60  SDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHE--QWRRMVDVNLMGPIHVI 117

Query: 136 KHAARIMIPQTKG-TIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +     M+   +G  ++++ S AG +  L  H AY+ SK  + GL++ +  +L ++GI V
Sbjct: 118 ETFVPPMVAAGRGGHLVNVSSAAGLVA-LPWHAAYSASKFGLRGLSEVLRFDLARHGIGV 176

Query: 194 NCVSPYAVATGL 205
           + V P AV T L
Sbjct: 177 SVVVPGAVKTPL 188

Length = 272

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 79.7 bits (197), Expect = 1e-17
 Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 42/274 (15%)

Query: 16  LVGRVALITGGA--TGIGESTVRLFHKHGAKVCI-----------ADVQDNLGQQVCQSL 62
           L+ ++AL+TG +   GIG +  R     G  +               + D     + + +
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 63  GGEPDTFFCH---CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
                   C     D+++            E+ G   I++NNA  S      + E    +
Sbjct: 63  ESYGVR--CEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHT--RLEELTAEQ 118

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAV 175
            +K + +NV+         A+    +  G II++ S  G    LGP     AY  +K A+
Sbjct: 119 LDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTS--GQS--LGPMPDELAYAATKGAI 174

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
               K++A EL + GI VN V+P    TG        EE     +  F          QG
Sbjct: 175 EAFTKSLAPELAEKGITVNAVNPGPTDTGWI-----TEELKHHLVPKF---------PQG 220

Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
                 D A  + FL S+EA++I+G  +  +GGF
Sbjct: 221 RVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF 254

Length = 256

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 78.9 bits (194), Expect = 3e-17
 Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 25/258 (9%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-------LGQQVCQSLGGEPDTFFC 71
           R+A +TGG  GIG S  +  HK G KV +A    N       L  Q  ++LG   D    
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKV-VAGCGPNSPRRVKWLEDQ--KALGF--DFIAS 58

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             +V   +   +A D    + G +D++VNNAGI+       R+    ++  V D N+  +
Sbjct: 59  EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVV--FRKMTREDWTAVIDTNLTSL 116

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F+  K     M+ +  G II+I SV G  G  G   Y+ +K  + G   ++A E+   G+
Sbjct: 117 FNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGV 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN VSP  + T +  A  P+      A +  R              + +++ + V +LA
Sbjct: 177 TVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLG-----------SPDEIGSIVAWLA 225

Query: 252 SDEARYISGTNLMVDGGF 269
           S+E+ + +G +  ++GG 
Sbjct: 226 SEESGFSTGADFSLNGGL 243

Length = 246

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 78.7 bits (194), Expect = 6e-17
 Identities = 79/259 (30%), Positives = 116/259 (44%), Gaps = 19/259 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFF 70
           RL GR ALITG  +GIG +T   F + GA + +     + QD    +V Q +  E     
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQD--AAEVVQLIQAEGRKAV 109

Query: 71  CHCDVTKEEDVCSA-VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
                 K+E  C   V+  V++ G LDI+VN AG   A   DI +    +F+  F  NV 
Sbjct: 110 ALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTA-VKDIADITTEQFDATFKTNVY 168

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            +F   K A   + P    +II+  S+           Y  +K A++   K +A ++ + 
Sbjct: 169 AMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEK 226

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  V T L  +     E+  D   G    + R    Q  E+     A   + 
Sbjct: 227 GIRVNAVAPGPVWTPLQPSGGQPPEKIPD--FGSETPMKRPG--QPVEM-----APLYVL 277

Query: 250 LASDEARYISGTNLMVDGG 268
           LAS E+ Y++G    V GG
Sbjct: 278 LASQESSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.1 bits (190), Expect = 1e-16
 Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 34/271 (12%)

Query: 15  RLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIA-----------DVQDNLGQQVCQS 61
           +L  +VA++TG     GIG +  +   + GA +               V  +   Q+ + 
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 62  LGGEPDTFFCHC---DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
           L    +         D+T+ +     ++   E+ G   I+VNNA  S     D       
Sbjct: 63  L--LKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNN--DFSNLTAE 118

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           E +K + +NV+         AR    ++ G II++ S       +G  AY  +K A+  L
Sbjct: 119 ELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDAL 178

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
             ++AAE+   GI VN ++P    TG        EE  +  +  F           G   
Sbjct: 179 TSSLAAEVAHLGITVNAINPGPTDTGWM-----TEEIKQGLLPMFP---------FGRIG 224

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGF 269
              D A  + FLAS+EA +I+G  +  +GGF
Sbjct: 225 EPKDAARLIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 76.5 bits (188), Expect = 1e-16
 Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 5/203 (2%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ---SLGG-EPDTFFC 71
           L  R+ L+TG + GIG      + ++GA V +    +   +QV       GG +P  F  
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
                  E+           +  LD +++NAG+ G  CP + E +   ++ V  +NV   
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-LSEQNPQVWQDVXQVNVNAT 120

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   +    +++    G+++   S  G  G     AY  SK A  GL + +A E  +  +
Sbjct: 121 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNL 180

Query: 192 RVNCVSPYAVATGLALAHLPEEE 214
           RVNC++P    T +  +  P E+
Sbjct: 181 RVNCINPGGTRTAMRASAFPTED 203

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 77.0 bits (190), Expect = 2e-16
 Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 33/271 (12%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHC 73
            L G+  LITG + GIG +    F   G  + + A   D L                 H 
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++  E      +    + G +DI+VNNAG    P   + + D + +   +++ V    
Sbjct: 64  LDLSSPEAR----EQLAAEAGDIDILVNNAG--AIPGGGLDDVDDAAWRAGWELKV---- 113

Query: 133 HGMKHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G     R+  P+ K    G I+++   AG          +    A++   + +  +   
Sbjct: 114 FGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLD 173

Query: 189 YGIRVNCVSPYAVAT--------GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
            G+RV  V+P  VAT        G A A L +E R ++ + G    + R A       T 
Sbjct: 174 DGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLP--LGRPA-------TP 224

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTS 271
            +VA+ V FLAS  + Y SGT + VDGG ++
Sbjct: 225 EEVADLVAFLASPRSGYTSGTVVTVDGGISA 255

Length = 259

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 75.7 bits (187), Expect = 5e-16
 Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 44/222 (19%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQV------CQSLGGE 65
           L G+   ITG + GIG +      + GA + I    A+    L   +       ++ GG+
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 66  --PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEK 122
             P       DV  E+ V +AV   VE+FG +DI VNNA  I+        +  +  F+ 
Sbjct: 64  ALP----LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTG---TEDTPMKRFDL 116

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGT----IISIC---SVAGAIGGLGPH-AYTGSKH- 173
           +  INV+G F  +  A    +P  K +    I+++    ++        PH AYT +K+ 
Sbjct: 117 MQQINVRGTF-LVSQAC---LPHLKKSENPHILTLSPPLNLDPK--WFAPHTAYTMAKYG 170

Query: 174 ---AVLGLNKNVAAELGKYGIRVNCVSP-YAVATGLALAHLP 211
                LGL    A E    GI VN + P   +AT  A+ +L 
Sbjct: 171 MSLCTLGL----AEEFRDDGIAVNALWPRTTIATA-AVRNLL 207

Length = 273

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 1e-15
 Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 56/280 (20%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLG--------- 63
           G+  +I+GG  GIG++ V  F + G  +        +  + + + + Q  G         
Sbjct: 8   GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLN 67

Query: 64  -GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-------APCPDIREA 115
             EP+T+    ++ K+ D         E F  +D  ++NA ISG            ++  
Sbjct: 68  ILEPETY---KELFKKID---------EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPK 115

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
            L+    ++   V     G + AA+ M     G+IIS+ S    +       +  SK AV
Sbjct: 116 GLN---NIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAV 172

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV-ARNANMQ 234
             + K  A ELG+  IRVN VS   + T              DA+  F N+   +    +
Sbjct: 173 ETMVKYAATELGEKNIRVNAVSGGPIDT--------------DALKAFTNYEEVKAKTEE 218

Query: 235 GTEL----TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
            + L       D+A A LFL S++A +++G  ++VDGG T
Sbjct: 219 LSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 15/194 (7%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQQVCQSL----GGEPDTFFCH 72
           G  A++TG   GIG++      K G  V  I+  Q+ L   V + +    G E  T    
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKL-DAVAKEIEEKYGVETKTI--A 57

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDI--MVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
            D +  +D+   ++  +E    LDI  +VNN GIS   P   + E    E + + ++NV 
Sbjct: 58  ADFSAGDDIYERIEKELE---GLDIGILVNNVGISHSIPEYFL-ETPEDELQDIINVNVM 113

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
                 +     M+ + KG I++I S AG I       Y+ SK  +   ++ +  E    
Sbjct: 114 ATLKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQ 173

Query: 190 GIRVNCVSPYAVAT 203
           GI V  + PY VAT
Sbjct: 174 GIDVQSLLPYLVAT 187

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 73.0 bits (179), Expect = 2e-15
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 27/255 (10%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L+TG + GIG +        G ++C+      +D +  +     Q        F    DV
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQF----DV 57

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHG 134
                  + ++  + + G    +V NAGI+  A  P + E D   ++ V   N+ G ++ 
Sbjct: 58  ADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEED---WDIVIHTNLDGFYNV 114

Query: 135 MKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +      MI   +G  II++ SV+G +G  G   Y+ +K  ++G  K +A EL K  I V
Sbjct: 115 IHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITV 174

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NC++P  + T +           E  +      V  N   Q       +VA+   FL SD
Sbjct: 175 NCIAPGLIDTEML-------AEVEHDLDEALKTVPMNRMGQ-----PAEVASLAGFLMSD 222

Query: 254 EARYISGTNLMVDGG 268
            A Y++   + V+GG
Sbjct: 223 GASYVTRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 73.1 bits (180), Expect = 5e-15
 Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 35/216 (16%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLG------QQVC----QSLGGEPDTFFC 71
           LITG  +G G    +     G  V +A      G      ++VC    ++L         
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTV-LAGCLTKNGPGAKELRRVCSDRLRTL--------- 53

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDI--MVNNAGISG--APCPDIREADLSEFEKVFDIN 127
             DVTK E +  A     E  G   +  +VNNAGI G       +   D   + K  ++N
Sbjct: 54  QLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDD---YRKCMEVN 110

Query: 128 VKGVFHGMKHAARIMIP---QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
                 G     +  +P   + KG ++++ S+ G +      AY  SK AV   + ++  
Sbjct: 111 ----LFGTVEVTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRR 166

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM 220
           EL  +G++V+ + P    TG+        E+    +
Sbjct: 167 ELQPWGVKVSIIEPGNFKTGITGNS-ELWEKQAKKL 201

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 71.7 bits (176), Expect = 7e-15
 Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 7/213 (3%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            +  L+TG   GIG++ V     HGAK   A V+D        +  G         DVT 
Sbjct: 3   DKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYG-DKVVPLRLDVTD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            E + +A      +   +D+++NNAG+   P   + E  L   ++  D+NV G+    + 
Sbjct: 62  PESIKAAA----AQAKDVDVVINNAGVL-KPATLLEEGALEALKQEMDVNVFGLLRLAQA 116

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
            A ++     G I+++ SVA          Y+ SK A   L + + AEL   G  V  V 
Sbjct: 117 FAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLSVH 176

Query: 198 PYAVATGLAL-AHLPEEERTEDAMVGFRNFVAR 229
           P  + T +A  A  P+E     A    +   A 
Sbjct: 177 PGPIDTRMAAGAGGPKESPETVAEAVLKALKAG 209

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 72.3 bits (177), Expect = 9e-15
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 25/262 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSL--GGEPDT 68
           RL  R AL+TGG +GIG +    + + GA V I     + +D   Q V + +   G    
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEED--AQDVKKIIEECGRKAV 103

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                D++ E+   S V    +  G LDIM   AG   A  PDI +    +F+K F INV
Sbjct: 104 LL-PGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVA-IPDIADLTSEQFQKTFAINV 161

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAEL 186
             +F  +   A  ++P+   +II+  S+        PH   Y  +K A+L  ++ +A ++
Sbjct: 162 FALFW-LTQEAIPLLPK-GASIITTSSIQAY--QPSPHLLDYAATKAAILNYSRGLAKQV 217

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            + GIRVN V+P  + T L ++      +T+D +  F          Q  EL     A  
Sbjct: 218 AEKGIRVNIVAPGPIWTALQISG----GQTQDKIPQFGQQTPMKRAGQPAEL-----APV 268

Query: 247 VLFLASDEARYISGTNLMVDGG 268
            ++LAS E+ Y++     V GG
Sbjct: 269 YVYLASQESSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 13/195 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G   LITGG +GIG +  R F + G  V I   ++    +  + L           DV
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHTI---VLDV 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-----GAPCPDIREADLSEFEKVFDINVKG 130
              E V +  +  + ++  LDI++NNAGI        P      +DL + +   D N+ G
Sbjct: 60  GDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDP-----ASDLDKADTEIDTNLIG 114

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
               +K     +  Q + TI+++ S    +       Y  +K A+      +  +L   G
Sbjct: 115 PIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTG 174

Query: 191 IRVNCVSPYAVATGL 205
           + V  + P AV T L
Sbjct: 175 VEVVEIVPPAVDTEL 189

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 41/198 (20%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQ---SLGGEPDTFF 70
            LVG+V LITG ++GIG +T     + GA V + A   + L  ++     + GG    + 
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEAL-DELVAEIRAKGGTAHAY- 425

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-DLS-----EFEKVF 124
             CD+T    V   V   + + G +D +VNNAG S      IR + + S     ++E+  
Sbjct: 426 -TCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRS------IRRSVENSTDRFHDYERTM 478

Query: 125 DINVKGVFHGMKHAARI-------MIPQTKGTIISICSVAGAIGGL--GPH--AYTGSKH 173
            +N  G       A R+       M  +  G ++++ S    IG     P   AY  SK 
Sbjct: 479 AVNYFG-------AVRLILGLLPHMRERRFGHVVNVSS----IGVQTNAPRFSAYVASKA 527

Query: 174 AVLGLNKNVAAELGKYGI 191
           A+   +   A+E    GI
Sbjct: 528 ALDAFSDVAASETLSDGI 545

Length = 657

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 19/189 (10%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVCQSLGGEPDTFFCHCDVT 76
           LITG  +G G        + G  V IA VQ       L  +     G          D+T
Sbjct: 6   LITGAGSGFGREVALRLARKGHNV-IAGVQIAPQVTALRAEA-ARRGLALRVE--KLDLT 61

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              D   A +  V      D+++NNAGI       DI    +    ++F+ NV G     
Sbjct: 62  DAIDRAQAAEWDV------DVLLNNAGIGEAGAVVDI---PVELVRELFETNVFGPLELT 112

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +   R M+ + KG ++   S+AG I G    AY  SKHA+  + + + AEL  +GI+V  
Sbjct: 113 QGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVAT 172

Query: 196 VSPYAVATG 204
           V+P    TG
Sbjct: 173 VNPGPYLTG 181

Length = 257

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 5e-14
 Identities = 71/266 (26%), Positives = 106/266 (39%), Gaps = 68/266 (25%)

Query: 34  TVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF- 92
           T RL    GA+V   D ++          G   D F    D+        ++D  V    
Sbjct: 1   TARLLRFLGARVIGVDRREP---------GMTLDGFI-QADLGDPA----SIDAAVAALP 46

Query: 93  GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK--GTI 150
           G +D + N AG+ G         +L     V  +N    F G++H    ++P+    G I
Sbjct: 47  GRIDALFNIAGVPG-----TAPVEL-----VARVN----FLGLRHLTEALLPRMAPGGAI 92

Query: 151 ISICSVAGA--------IGGLG-------------------PHAYTGSKHAVLGLN-KNV 182
           +++ S+AGA           L                       Y  SK A++    +  
Sbjct: 93  VNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQA 152

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
               G  GIRVNCV+P  V T + L           +M+G +  V  +A   G   TA++
Sbjct: 153 QPWFGARGIRVNCVAPGPVFTPI-LGDFR-------SMLG-QERVDSDAKRMGRPATADE 203

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
            A  ++FL SD AR+I+G NL VDGG
Sbjct: 204 QAAVLVFLCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 69.4 bits (170), Expect = 5e-14
 Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 35/248 (14%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVC--------IADVQDNLGQQVCQSLGGEPDTFFC 71
           + L+TG   G GE   R F + G KV         + +++D LG  +          +  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNL----------YIA 51

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV     +   +     ++  +D++VNNAG++    P   +A + ++E + D N KG+
Sbjct: 52  QLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEP-AHKASVEDWETMIDTNNKGL 110

Query: 132 FHGMKHAARI-MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            + M  A    M+ +  G II+I S AG+    G + Y  +K  V   + N+  +L    
Sbjct: 111 VY-MTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTA 169

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-NANMQGTE-LTANDVANAVL 248
           +RV  + P  V              TE + V F+    +     Q T  LT  DV+ AV 
Sbjct: 170 VRVTDIEPGLVGG------------TEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVW 217

Query: 249 FLASDEAR 256
           ++A+  A 
Sbjct: 218 WVATLPAH 225

Length = 248

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 68.6 bits (167), Expect = 1e-13
 Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 21/261 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQV--CQSLGGEPDTFFC 71
           L G+VAL+TG + GIG +  +     GA V I   + ++   + V   QS GG   +   
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 72  HCD-VTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
           + + +   E + S++D  ++        DI++NNAGI   P   I E     F+++  +N
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI--GPGAFIEETTEQFFDRMVSVN 119

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            K  F  ++ A   +   ++  II+I S A  I      AY+ +K A+  +   +A +LG
Sbjct: 120 AKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLG 177

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
             GI VN + P  + T +        E   D M+          N  G      D+A+  
Sbjct: 178 ARGITVNAILPGFIKTDM------NAELLSDPMMKQYATTISAFNRLG---EVEDIADTA 228

Query: 248 LFLASDEARYISGTNLMVDGG 268
            FLAS ++R+++G  + V GG
Sbjct: 229 AFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 33/209 (15%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNL------GQQVCQSLGGE 65
           L G+   ITG + GIG++      + GA V I    A+    L        +  ++ GG+
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                C  D+  E+ V +AV+  VEKFG +DI+VNNA  S        +  +  ++ +  
Sbjct: 61  --ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNA--SAISLTGTLDTPMKRYDLMMG 116

Query: 126 INVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIG----GLGPH-AYTGSKHA----V 175
           +N +G +      ++  +P   K     I +++  +         H AYT +K+     V
Sbjct: 117 VNTRGTY----LCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCV 172

Query: 176 LGLNKNVAAELGKYGIRVNCVSP-YAVAT 203
           LG+    A E    GI VN + P  A+AT
Sbjct: 173 LGM----AEEFKPGGIAVNALWPRTAIAT 197

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 71/267 (26%), Positives = 109/267 (40%), Gaps = 37/267 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGGEPDTFFCHC- 73
           L G+VA++TG A G+G +      + GA V + DV   L    V   +            
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINV 128
           D+++       V   V   G LDI+VNNAGI        R+  L      E++ V  +++
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGI-------TRDRMLFNMSDEEWDAVIAVHL 121

Query: 129 KGVFHGMKHAARIMIPQTK-------GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           +G F   ++AA     + K       G I++  S AG +G +G   Y  +K  +  L  +
Sbjct: 122 RGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLS 181

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
            A  LG+YG+R N + P A               T D      +  A   +     L+  
Sbjct: 182 AARALGRYGVRANAICPRA-----------RTAMTADVFGDAPDVEAGGID----PLSPE 226

Query: 242 DVANAVLFLASDEARYISGTNLMVDGG 268
            V   V FLAS  A  ++G   +V G 
Sbjct: 227 HVVPLVQFLASPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 23/255 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+   I G + G+G +      K GA+VCI    +N  +++ ++L    +  +   D
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+  E   + ++   +    +D +V   G       +    + S  E++   ++K   + 
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVE----EFSGLEEMLTNHIKIPLYA 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +  + R +   +  +I+ + S++G         +Y  +K  +    + +A+EL   GIRV
Sbjct: 118 VNASLRFLKEGS--SIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRV 175

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P    T ++    PE    +   +G         +M   E    D A  +++L +D
Sbjct: 176 NGIAP----TTISGDFEPERNWKKLRKLG--------DDMAPPE----DFAKVIIWLLTD 219

Query: 254 EARYISGTNLMVDGG 268
           EA ++ G  + VDGG
Sbjct: 220 EADWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 16/198 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            L G+  L+TG ++GIGE+    F + GA V  +A  +D L     +      D     C
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPC 96

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS------EFEKVFDIN 127
           D++  + V + V    ++ G +DI++NNAG S      IR           + E+   +N
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAGRS------IRRPLAESLDRWHDVERTMVLN 150

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAE 185
                  ++  A  M+ +  G II++ +  G +    P    Y  SK A+  +++ +  E
Sbjct: 151 YYAPLRLIRGLAPGMLERGDGHIINV-ATWGVLSEASPLFSVYNASKAALSAVSRVIETE 209

Query: 186 LGKYGIRVNCVSPYAVAT 203
            G  G+    +    VAT
Sbjct: 210 WGDRGVHSTTLYYPLVAT 227

Length = 293

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 66.8 bits (164), Expect = 4e-13
 Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 30/211 (14%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC---- 73
           G+V L+TG   GIG + V      GA    A  +D             P++         
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD-------------PESVTDLGPRVV 52

Query: 74  ----DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDIN 127
               DVT    V +A +        + I+VNNAGI  +G+    + E D        + N
Sbjct: 53  PLQLDVTDPASVAAAAEAA----SDVTILVNNAGIFRTGSL---LLEGDEDALRAEMETN 105

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
             G     +  A ++     G I+++ SV   +       Y+ SK A   L + + AEL 
Sbjct: 106 YFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELA 165

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTED 218
             G RV  V P  + T +A      +    D
Sbjct: 166 PQGTRVLGVHPGPIDTDMAAGLDAPKASPAD 196

Length = 238

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 66.9 bits (164), Expect = 7e-13
 Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 33/211 (15%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT---FFCHCD 74
           G+V +ITG  +GIG+ T R   K GA V IA   +  G++    +  E           D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVF 132
           ++    V    +  + +F  LDI++NNAGI            L++  FE  F +N  G F
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIM------APPRRLTKDGFELQFAVNYLGHF 114

Query: 133 HGMKHAARIMIPQTKGT----IISICSVAGAIG-------------GLGPH-AYTGSKHA 174
                   +++P  K +    I+++ S+A   G                P+ AY  SK A
Sbjct: 115 L----LTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLA 170

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGL 205
            +   + +A  L   G+ VN + P  V T L
Sbjct: 171 NILFTRELARRLEGTGVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 64.6 bits (157), Expect = 8e-13
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ---SLGGEPDTFFC 71
           +L G+VA++TGG  GIG +T  L  K GAKV + D+    GQ   +   +LGGE    F 
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE--ALFV 70

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI 104
             D+ K+ D    + +T+  F  +D++  NAG+
Sbjct: 71  SYDMEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 3e-12
 Identities = 69/250 (27%), Positives = 102/250 (40%), Gaps = 27/250 (10%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           L+ GG++GIG +  R F   GA+V IA    +      ++LGG         D+T E   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEA-- 58

Query: 82  CSAVDLTVEKFGTLD-IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
             AVD    + G  D +++  A   G P   +R   L+  +   D      F G    AR
Sbjct: 59  --AVDAFFAEAGPFDHVVITAADTPGGP---VRALPLAAAQAAMDSK----FWGAYRVAR 109

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
                  G++  +   A                A+  L + +A EL    +RVN VSP  
Sbjct: 110 AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGL 167

Query: 201 VATGLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI 258
           V T L  + L  + R     A        AR            DVANA+LFLA++   + 
Sbjct: 168 VDTPL-WSKLAGDAREAMFAAAA--ERLPARRVG------QPEDVANAILFLAAN--GFT 216

Query: 259 SGTNLMVDGG 268
           +G+ ++VDGG
Sbjct: 217 TGSTVLVDGG 226

Length = 230

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 64.9 bits (159), Expect = 3e-12
 Identities = 62/270 (22%), Positives = 100/270 (37%), Gaps = 50/270 (18%)

Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVC--------IADVQDNLGQQVC 59
              P    L  R+ L+TG   GIG      + +HGA V         +  V D    ++ 
Sbjct: 2   HYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYD----EIE 57

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
            + G +P            ++     D   E+FG LD +++NAG+ G   P + + D   
Sbjct: 58  AAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGP-MEQQDPEV 116

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQT---------KGTIISICSVAGAIGGLGPHAYTG 170
           ++ V  +NV   F         M+ Q            +++   S  G  G     AY  
Sbjct: 117 WQDVMQVNVNATF---------MLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV 167

Query: 171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN 230
           SK A  G+ + +A E     +RVNC++P    T +  +  P     ED            
Sbjct: 168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP----GEDPQ---------- 213

Query: 231 ANMQGTELTANDVANAVLFLASDEARYISG 260
                   T  D+    L+L  D++R  +G
Sbjct: 214 -----KLKTPEDIMPLYLYLMGDDSRRKNG 238

Length = 247

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 64.6 bits (158), Expect = 3e-12
 Identities = 72/276 (26%), Positives = 115/276 (41%), Gaps = 41/276 (14%)

Query: 11  PAVQRLVGRVALITGGATG--IGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGE 65
             +  L G+  L+ G A    I     R F   GA++ +  + D     V    + L   
Sbjct: 3   QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAP 62

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READLSE--FE 121
               F   DV +   + +      E++G LD ++++  I+ AP  D+  R  D S   F 
Sbjct: 63  ---IFLPLDVREPGQLEAVFARIAEEWGRLDFLLHS--IAFAPKEDLHGRVVDCSREGFA 117

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA------IGGLGPHAYTGSKHAV 175
              D++    F  M   A  ++    G+++++ S  GA         +GP      K A+
Sbjct: 118 LAMDVSCHS-FIRMARLAEPLMTN-GGSLLTM-SYYGAEKVVENYNLMGP-----VKAAL 169

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANM 233
               + +AAELG  GIRV+ +SP  + T  A  +     +   EDA        A  A  
Sbjct: 170 ESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDF--DALLEDA--------AERAP- 218

Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
               +  +DV     FLASD AR ++G  L +DGG+
Sbjct: 219 LRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 6e-12
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 18/192 (9%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVC-----IADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           V LITG ++GIG +    F   G +V        DV+  L      ++           D
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAAAGFTAV---------QLD 52

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V     +    +    + G LD+++NNAG  GA  P + +  +    + F+ NV  V  G
Sbjct: 53  VNDGAALARLAEELEAEHGGLDVLINNAGY-GAMGP-LLDGGVEAMRRQFETNVFAVV-G 109

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +  A   ++ +++G +++I SV+G +      AY  SK AV  L+  +  EL  +G++V 
Sbjct: 110 VTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVM 169

Query: 195 CVSPYAVATGLA 206
            V P A+A+  A
Sbjct: 170 EVQPGAIASQFA 181

Length = 274

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 23/249 (9%)

Query: 20  VALITGGATGIGESTVRLFHKHGAK---VCIADVQDNLGQQVCQSLGGEPDTFFCH-CDV 75
           V ++TG + GIG +      K G+    V +A  ++ L +   +   G          D+
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPG--LRVTTVKADL 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF--- 132
           +    V   ++   +  G  D+++NNAG  G P   I   DL E +K FD+N+       
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLG-PVSKIEFIDLDELQKYFDLNLTSPVCLT 117

Query: 133 -HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              ++   +      K T++++ S A      G   Y  SK A     + +AAE     +
Sbjct: 118 STLLRAFKK---RGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDV 172

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RV   +P  V T      +  E R   A    R+   R+   +G  L     A  +  L 
Sbjct: 173 RVLSYAPGVVDT-----DMQREIRETSADPETRSRF-RSLKEKGELLDPEQSAEKLANLL 226

Query: 252 SDEARYISG 260
            ++ ++ SG
Sbjct: 227 -EKDKFESG 234

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 68/244 (27%), Positives = 100/244 (40%), Gaps = 28/244 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
            L G V +ITG ++GIG++T   F + GA++ +A   +   Q V   C++LG E      
Sbjct: 4   PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE--VLVV 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVT  + V +         G +D+ VNN G+ GA      E  +   E+V   N+ G 
Sbjct: 62  PTDVTDADQVKALATQAASFGGRIDVWVNNVGV-GA-VGRFEETPIEAHEQVIQTNLIGY 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY-G 190
                 A  I   Q  G  I++ S+ G        AY+ SK  + G ++ +  EL  +  
Sbjct: 120 MRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPD 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNANMQGTELTANDVANAV 247
           I V  V P  + T       P          GFR   N+  R             VA AV
Sbjct: 180 IHVCDVYPAFMDT-------P----------GFRHGANYTGRRLTPPPPVYDPRRVAKAV 222

Query: 248 LFLA 251
           + LA
Sbjct: 223 VRLA 226

Length = 330

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 5/192 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L  +  L+TG + GIG++        GA++ +        + +   L       +   D
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           +T E     AV     + G +++++NNAG++  A   D     +     +  +N+     
Sbjct: 62  LTSEAGR-EAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIER---LLALNLTAPMQ 117

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +    ++  Q    ++++ S  G+IG  G  +Y  SK A+ G ++ +  EL   G+RV
Sbjct: 118 LTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRV 177

Query: 194 NCVSPYAVATGL 205
             ++P A  T +
Sbjct: 178 LYLAPRATRTAM 189

Length = 263

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 1e-10
 Identities = 71/286 (24%), Positives = 112/286 (39%), Gaps = 71/286 (24%)

Query: 26  GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCS-- 83
           GA GIG++  R     G KV +AD  +   +   ++L             T+E DV S  
Sbjct: 9   GAGGIGQAIARRV-GAGKKVLLADYNEENLEAAAKTLREAG-----FDVSTQEVDVSSRE 62

Query: 84  ---AVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
              A+  T +  G +  +V+ AG+S   A    I + DL     V +             
Sbjct: 63  SVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLE-----------EF 111

Query: 139 ARIMIPQTKGTIISICSVAG-----------------------AIGGLGP-------HAY 168
            +++ P   G +I+  S +G                       ++  L P       HAY
Sbjct: 112 GKVIAPGGAGVVIA--SQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAY 169

Query: 169 TGSKHAVLGLN-KNVAAE---LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR 224
             +K A    N   V AE    G+ G R+N +SP  ++T LA   L           G+R
Sbjct: 170 QIAKRA----NALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGD-----GYR 220

Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           N  A++    G   T +++A    FL      +I+G++ +VDGG T
Sbjct: 221 NMFAKSPA--GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT 264

Length = 275

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 50/278 (17%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLG------QQVCQSLGGEPD 67
           L G+ AL+TG A    I     +  H  GA++ I  + D  G      +++ + L   P 
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NP- 60

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV------NNAGISGAPCPDIREADLSEFE 121
           + F  CDV  +  +    +   +K+G LDI+V          + G    D        F 
Sbjct: 61  SLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIG----DFSATSREGFA 116

Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-K 180
           +  +I+   +    K A  +M   ++G  I   +  G +  +  +   G   A L  + +
Sbjct: 117 RALEISAYSLAPLCKAAKPLM---SEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVR 173

Query: 181 NVAAELGKYGIRVNCVS--------PYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
            +AAELG   IRVN +S          AV   L + H  EE+                A 
Sbjct: 174 YLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEK----------------AP 217

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           ++ T +T  +V N   FL SD A  I+G  + VD G+ 
Sbjct: 218 LRRT-VTQTEVGNTAAFLLSDLASGITGQTIYVDAGYC 254

Length = 258

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 25/266 (9%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-H 72
           + G+  LI G A    I     +     GA++      D L ++V + L  E   F   H
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRV-EPLAAELGAFVAGH 66

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
           CDVT E  + +  +   +K+G LD +V+  G S       R  D S   F    DI+V  
Sbjct: 67  CDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYS 126

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
                + A ++M     G+I+++ +  GA   +  +   G   A L  + K +A +LG  
Sbjct: 127 FTAVAQRAEKLM--TDGGSILTL-TYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPK 183

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA---RNANMQGTELTANDVANA 246
            IRVN +S   + T LA + + +          FR  +     NA ++ T +T  +V ++
Sbjct: 184 NIRVNAISAGPIKT-LAASGIGD----------FRYILKWNEYNAPLRRT-VTIEEVGDS 231

Query: 247 VLFLASDEARYISGTNLMVDGGFTSV 272
            L+L SD +R ++G    VD G+  V
Sbjct: 232 ALYLLSDLSRGVTGEVHHVDSGYHVV 257

Length = 272

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 11/191 (5%)

Query: 19  RVALITGGATGIG-ESTVRLFH--KHGAKVCIADVQD-NLGQQVCQSLGGE-PDTF-FCH 72
            V LITG ++GIG    VRL        KV  A ++D     ++ ++ G     T     
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKV-YATMRDLKKKGRLWEAAGALAGGTLETLQ 59

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV   + V +AV+   E    +D++V NAG+ G   P +          VFD+NV G  
Sbjct: 60  LDVCDSKSVAAAVERVTE--RHVDVLVCNAGV-GLLGP-LEALSEDAMASVFDVNVFGTV 115

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++     M  +  G I+   SV G  G      Y  SK A+ GL +++A +L  + + 
Sbjct: 116 RMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNVH 175

Query: 193 VNCVSPYAVAT 203
           ++ +    V T
Sbjct: 176 LSLIECGPVHT 186

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 32/247 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDV 75
           R AL+ G ++GIG +T       G  V +   +    +++   +   GGE   F    DV
Sbjct: 11  RPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAF--PLDV 68

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR-----EADLSEFEKVFDINVKG 130
           T  + V S V    E  G ++++V+ AG       D       E    +FE    I++ G
Sbjct: 69  TDPDSVKSFVAQAEEALGEIEVLVSGAG-------DTYFGKLHEISTEQFESQVQIHLVG 121

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGK 188
                      MI + +G +I + S         PH  AY  +K  +  +  N+  EL  
Sbjct: 122 ANRLATAVLPGMIERRRGDLIFVGSDVALRQ--RPHMGAYGAAKAGLEAMVTNLQMELEG 179

Query: 189 YGIRVNCVSPYAVATGLALAHLPE--EERTED-AMVGFRNFVARNANMQGTELTANDVAN 245
            G+R + V P    TG+  +   E      ED A  G     AR+       L A+D+A 
Sbjct: 180 TGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQ----ARHDYF----LRASDLAR 231

Query: 246 AVLFLAS 252
           A+ F+A 
Sbjct: 232 AITFVAE 238

Length = 274

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 58.9 bits (143), Expect = 5e-10
 Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 30/219 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+ A++TGG +G+G  T R   + GA V +   + ++ ++    L G         D+
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREA---LAGIDGVEVVMLDL 80

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              E V +  +  ++    +DI++NNAG+    CP+ R  D   +E  F  N  G F  +
Sbjct: 81  ADLESVRAFAERFLDSGRRIDILINNAGVMA--CPETRVGD--GWEAQFATNHLGHFALV 136

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGL---GPH---------AYTGSKHA----VLGLN 179
                 +       ++++ S       +    PH         AY  SK A     + L+
Sbjct: 137 NLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLD 196

Query: 180 KNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEERTE 217
           K     LGK  G+R   V P  + T L   HLP EE+  
Sbjct: 197 K-----LGKDQGVRAFSVHPGGILTPLQ-RHLPREEQVA 229

Length = 315

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 57.6 bits (140), Expect = 9e-10
 Identities = 62/266 (23%), Positives = 109/266 (40%), Gaps = 30/266 (11%)

Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGG 64
           SP +     R AL+TG A  IG +       HG  V +      D  + L  ++ ++LG 
Sbjct: 1   SPPMSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI-RALGR 59

Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF 124
                    D+  E +V + V       G + ++VNNA  S            + +++  
Sbjct: 60  RAVAL--QADLADEAEVRALVARASAALGPITLLVNNA--SLFEYDSAASFTRASWDRHM 115

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNV 182
             N++  F   +  AR +    +G ++++  +   +  L P   +YT SK A+    + +
Sbjct: 116 ATNLRAPFVLAQAFARALPADARGLVVNM--IDQRVWNLNPDFLSYTLSKAALWTATRTL 173

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           A  L    IRVN     A+  G     LP   ++ +    F    A     +G+     +
Sbjct: 174 AQALAPR-IRVN-----AIGPGPT---LPSGRQSPE---DFARQHAATPLGRGSTP--EE 219

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           +A AV +L   +A  ++G  + VDGG
Sbjct: 220 IAAAVRYLL--DAPSVTGQMIAVDGG 243

Length = 258

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 29/203 (14%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +  G   LITGGA+GIG +  + F + G  V I    +    +        P+     CD
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---PEIHTEVCD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD-------IN 127
           V   +     V+   +++  L++++NNAGI        R  DL+  E + D        N
Sbjct: 59  VADRDSRRELVEWLKKEYPNLNVLINNAGI-------QRNEDLTGAEDLLDDAEQEIATN 111

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--PHA----YTGSKHAVLGLNKN 181
           +             ++ Q + TII++ S      GL   P A    Y  +K A+      
Sbjct: 112 LLAPIRLTALLLPHLLRQPEATIINVSS------GLAFVPMASTPVYCATKAAIHSYTLA 165

Query: 182 VAAELGKYGIRVNCVSPYAVATG 204
           +  +L    + V  ++P  V T 
Sbjct: 166 LREQLKDTSVEVIELAPPLVDTT 188

Length = 245

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 50/257 (19%), Positives = 90/257 (35%), Gaps = 43/257 (16%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            RV L+ GG   +G + V+ F   G  V   D+ +N        +             + 
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAENEEADASIIVLD---------SDSF 51

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E     V       G +D ++  AG  +G       ++ +  ++ ++  N+   F    
Sbjct: 52  TEQAKQVVASVARLSGKVDALICVAGGWAGGSAKS--KSFVKNWDLMWKQNLWTSFIASH 109

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKNVAAELG--KYG 190
            A + +   + G ++      GA   L P      Y  +K AV  L +++AAE      G
Sbjct: 110 LATKHL--LSGGLLVLT----GAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAG 163

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
              N + P  + T      +P+ + +                   +      +A  +LF 
Sbjct: 164 STANAILPVTLDTPANRKAMPDADFS-------------------SWTPLEFIAELILFW 204

Query: 251 ASDEARYISGTNLMVDG 267
           AS  AR  SG+ + V  
Sbjct: 205 ASGAARPKSGSLIPVVT 221

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 54.5 bits (131), Expect = 6e-09
 Identities = 49/202 (24%), Positives = 77/202 (38%), Gaps = 18/202 (8%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           ALI G   GIG +  R     G ++ ++             L  E        DV  E  
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRD----AGALAGLAAEVGALARPADVAAE-- 54

Query: 81  VCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA 139
               V    ++ G LD++V  AG I G P    + A      ++ D N+ G    +KHA 
Sbjct: 55  --LEVWALAQELGPLDLLVYAAGAILGKPLARTKPAAW---RRILDANLTGAALVLKHAL 109

Query: 140 RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY 199
            ++    +   +        + GL   AY  +K A+    +    E+   G+R+  V P 
Sbjct: 110 ALLAAGARLVFLGAYPELVMLPGLS--AYAAAKAALEAYVEVARKEV--RGLRLTLVRPP 165

Query: 200 AVATGL--ALAHLPEEERTEDA 219
           AV TGL      LP+   + + 
Sbjct: 166 AVDTGLWAPPGRLPKGALSPED 187

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 54.5 bits (131), Expect = 9e-09
 Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 19/262 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEP-DTFFCHC 73
           L G++A  T  + GIG    R+  + GA V + +  ++NL +   +       D  +   
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD-IREADLSEFEKVFDINVKGVF 132
           D+TK ED+   V   ++  G  DI   +   +G P P    E  + ++E      VK + 
Sbjct: 66  DLTKREDLERTVK-ELKNIGEPDIFFFS---TGGPKPGYFMEMSMEDWEGA----VKLLL 117

Query: 133 HGMKHAARIMIP--QTKGTIISICSVAGAIGGLGPHAYTGS--KHAVLGLNKNVAAELGK 188
           +   +  R ++P  + KG    I S + AI    P+    +  + ++ GL + +A ELG 
Sbjct: 118 YPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGP 177

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMV--GFRNFVARNANMQGTELTANDVANA 246
            GI VN + P  + T   +    +  + E   V    + + A+   + G      ++   
Sbjct: 178 KGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEY-AKPIPL-GRLGEPEEIGYL 235

Query: 247 VLFLASDEARYISGTNLMVDGG 268
           V FLASD   YI+G  + VDGG
Sbjct: 236 VAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 62/209 (29%), Positives = 85/209 (40%), Gaps = 39/209 (18%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R  LITG ++GIG    R     G +V  A  +        ++ G E   F    D  + 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRV-FATCRKEEDVAALEAEGLE--AF--QLDYAEP 59

Query: 79  EDVCSAVDLTVEKF-GTLDIMVNNA--GISGA----PCPDIREADLSEFEKVFDINVKGV 131
           E + + V   +E   G LD + NN   G  GA    P   +R          F+ N    
Sbjct: 60  ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQ--------FEAN---- 107

Query: 132 FHGMKHAARIMIP----QTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKNVA 183
           F G     R +IP    Q +G I+  CS   +I GL P     AY  SK A+ GL+  + 
Sbjct: 108 FFGWHDLTRRVIPVMRKQGQGRIVQ-CS---SILGLVPMKYRGAYNASKFAIEGLSLTLR 163

Query: 184 AELGKYGIRVNCVSPYAVATGL---ALAH 209
            EL   GI V+ + P  + T     ALA 
Sbjct: 164 MELQGSGIHVSLIEPGPIETRFRANALAA 192

Length = 277

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 72/272 (26%), Positives = 117/272 (43%), Gaps = 47/272 (17%)

Query: 18  GRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCH 72
           G+  LI G A    I     +     GA++      + LG++V    +SLG +   F   
Sbjct: 7   GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSD---FVLP 63

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
           CDV     V +  +   +K+G LD +V+  G S       R AD +   F +   I+   
Sbjct: 64  CDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFS 123

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLNKN---- 181
                K AA++M     G+++++              Y GS        V+G+ K     
Sbjct: 124 FTEIAKRAAKLM--PDGGSMLTL-------------TYGGSTRVMPNYNVMGVAKAALEA 168

Query: 182 ----VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
               +AA+ G  GIRVN +S   V T LA A +       DA   F ++  RN+ ++ T 
Sbjct: 169 SVRYLAADYGPQGIRVNAISAGPVRT-LAGAGI------GDARAIF-SYQQRNSPLRRT- 219

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           +T ++V  + L+L SD +  ++G    VD G+
Sbjct: 220 VTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251

Length = 271

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.0 bits (125), Expect = 7e-08
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 61/282 (21%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           L G+  ++ G A    I     R  H  GAK+      + L ++V     +L G+ ++  
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQ-ESLL 63

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR----EADLSEFEKVFDI 126
             CDVT +E++ +  +   E+ G +  + +   I+ A   D+R    E     F    +I
Sbjct: 64  LPCDVTSDEEITACFETIKEEVGVIHGVAHC--IAFANKEDLRGEFLETSRDGFLLAQNI 121

Query: 127 NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN------- 179
           +       +   A+ ++ +  G+I+++              Y G +  V   N       
Sbjct: 122 SAYS-LTAVAREAKKLMTE-GGSIVTL-------------TYLGGERVVQNYNVMGVAKA 166

Query: 180 ------KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF------V 227
                 K +A +LGK GIRVN +S   +             RT  A  G   F      +
Sbjct: 167 SLEASVKYLANDLGKDGIRVNAISAGPI-------------RTLSAK-GVGGFNSILKEI 212

Query: 228 ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
              A ++ T  T  +V +   FL SD +R ++G N+ VD G+
Sbjct: 213 EERAPLRRT-TTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY 253

Length = 257

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.1 bits (125), Expect = 7e-08
 Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 30/199 (15%)

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG----M 135
           +V   V    + FG +DI+V+    S A  P+I +  L    K +   +    +     +
Sbjct: 108 EVAEQV---KKDFGHIDILVH----SLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL 160

Query: 136 KHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIR 192
            H   IM P   G+ IS+  +A   A+ G G    + +K A+    K +A E G ++GIR
Sbjct: 161 SHFGPIMNPG--GSTISLTYLASMRAVPGYG-GGMSSAKAALESDTKVLAWEAGRRWGIR 217

Query: 193 VNCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           VN +S  P A   G A+  +       + MV   ++    A +    + A  V  A  FL
Sbjct: 218 VNTISAGPLASRAGKAIGFI-------ERMV---DYYQDWAPLP-EPMEAEQVGAAAAFL 266

Query: 251 ASDEARYISGTNLMVDGGF 269
            S  A  I+G  L VD G 
Sbjct: 267 VSPLASAITGETLYVDHGA 285

Length = 299

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 24/193 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
             ALITG + GIG +  R        +      + L  ++   L G    F    D+T  
Sbjct: 4   PTALITGASRGIGAAIARELAPTHTLLLGGRPAERL-DELAAELPGAT-PF--PVDLTDP 59

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           E + +A    VE+ G LD++V+NAG++    P + E+ + E+    ++NV         A
Sbjct: 60  EAIAAA----VEQLGRLDVLVHNAGVA-DLGP-VAESTVDEWRATLEVNVVAP------A 107

Query: 139 A--RIMIPQ---TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV-AAELGKYGIR 192
              R+++P      G ++ I S AG     G  +Y  SK A+  L   +   E G   +R
Sbjct: 108 ELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGN--VR 165

Query: 193 VNCVSPYAVATGL 205
           V  V P    T +
Sbjct: 166 VTSVHPGRTDTDM 178

Length = 227

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 44/277 (15%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
           L G+  LITG       A GI ++      + GA++    V D L ++V +         
Sbjct: 4   LQGKKILITGMISERSIAYGIAKAC----REQGAELAFTYVVDKLEERVRKMAAELDSEL 59

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-------DLSE--F 120
              CDV  ++++        + +  LD +V++ G   AP    +EA        +S   F
Sbjct: 60  VFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGF--AP----KEALSGDFLDSISREAF 113

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN- 179
               +I+       +  AAR M+      I+++ S  GA+  +  +   G   A L    
Sbjct: 114 NTAHEISAYS-LPALAKAARPMMRGRNSAIVAL-SYLGAVRAIPNYNVMGMAKASLEAGI 171

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNANMQGT 236
           +  AA LGK GIR N +S   + T  A             +  F      VA +  ++  
Sbjct: 172 RFTAACLGKEGIRCNGISAGPIKTLAA-----------SGIADFGKLLGHVAAHNPLR-R 219

Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            +T  +V N   FL SD +  I+G    VDGG+ S+N
Sbjct: 220 NVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY-SIN 255

Length = 261

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 49.4 bits (118), Expect = 5e-07
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 19/203 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFFCHCD 74
           G+  +ITG  TGIG+ T R   + GA+V +A       ++    +  +    +    H D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   + + +     + +   LD+++NNAG+    CP  +  D   FE  F +N  G F  
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGV--MRCPYSKTED--GFEMQFGVNHLGHFLL 116

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPH------------AYTGSKHAVLGLNKNV 182
                 ++       I+++ S+A   G +               AY  SK A +   + +
Sbjct: 117 TNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLANVLFTREL 176

Query: 183 AAELGKYGIRVNCVSPYAVATGL 205
           A  L   G+ VN + P  V T L
Sbjct: 177 ARRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 8e-07
 Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 25/266 (9%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           L+T  + GIG +  R   K GA+V I+   +   ++  + L    + +    D++ ++D+
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDL 63

Query: 82  CSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
            + V    E  G +D +V NAG +   PC  + EA  S++ +   +++  V  G  +   
Sbjct: 64  KNLVKEAWELLGGIDALVWNAGNVRCEPCM-LHEAGYSDWLEAALLHL--VAPG--YLTT 118

Query: 141 IMIP-----QTKGTIISICSVAGAIGGLGPHAYTGSKHAVL-GLNKNVAAELGKYGIRVN 194
           ++I      + KG ++ + SV+     + P        A L  L K V+   G  GIR  
Sbjct: 119 LLIQAWLEKKMKGVLVYLSSVS-VKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAY 177

Query: 195 CV------SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            V      +P A      +A    EER       +   V     ++ T     ++ + + 
Sbjct: 178 TVLLGSFDTPGARENLARIA----EERGVSFEETWEREVLERTPLKRTG-RWEELGSLIA 232

Query: 249 FLASDEARYISGTNLMVDGGFT-SVN 273
           FL S+ A Y+ G+ ++ DG  T  VN
Sbjct: 233 FLLSENAEYMLGSTIVFDGAMTRGVN 258

Length = 259

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 46/198 (23%), Positives = 76/198 (38%), Gaps = 19/198 (9%)

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E+     VD  ++  G +D++V+N  I   P   I     ++  + F+      F  ++ 
Sbjct: 56  EQKPEELVDAVLQAGGAIDVLVSNDYIP-RPMNPIDGTSEADIRQAFEALSIFPFALLQA 114

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHA----YTGSKHAVLGLNKNVAAELGKYGIRV 193
           A   M     G+II I S         P A    Y  ++ A + L +++A EL +  I V
Sbjct: 115 AIAQMKKAGGGSIIFITSAVP----KKPLAYNSLYGPARAAAVALAESLAKELSRDNILV 170

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLFLA 251
             + P    +         E   E      R  V R+  +   G     +++   V FLA
Sbjct: 171 YAIGPNFFNSPTYFPTSDWENNPE-----LRERVKRDVPLGRLGRP---DEMGALVAFLA 222

Query: 252 SDEARYISGTNLMVDGGF 269
           S  A  I+G      GG+
Sbjct: 223 SRRADPITGQFFAFAGGY 240

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 5/91 (5%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG---EPDTFFCHC 73
           GRVA++TG  TG+G  T       GA V +A V++ + G+     +       D      
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLA-VRNLDKGKAAAARITAATPGADVTLQEL 74

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI 104
           D+T    V +A D     +  +D+++NNAG+
Sbjct: 75  DLTSLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 46/169 (27%), Positives = 64/169 (37%), Gaps = 20/169 (11%)

Query: 95  LDIMVNNAGISGAPCPDIREADL--SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIIS 152
            D++V+NA I      D R  DL  S  E+    NV G    ++ A  +M  +  G  I 
Sbjct: 32  RDVVVHNAAIL----DDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFIL 87

Query: 153 ICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE 212
           I SVAG  G  G   Y  SK A+ GL +  A+E    G+    V+    A G  +A  P 
Sbjct: 88  ISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWA-GSGMAKGPV 146

Query: 213 EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA---SDEARYI 258
                         +  N       +   +VA A+L           YI
Sbjct: 147 APE----------EILGNRRHGVRTMPPEEVARALLNALDRPKAGVCYI 185

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 21/162 (12%)

Query: 18  GRVALITGGATGIGESTVR-LFHKHGAKV--------CIADVQDNLGQQVCQSLGGEPDT 68
           G V L+TGGA GIG +  R L  ++GA++           +          ++LG     
Sbjct: 205 GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVL- 263

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD--IREADLSEFEKVFDI 126
            +   DVT    V   ++   E++G +D +++ AG+      D  + +    +FE V   
Sbjct: 264 -YISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL----RDALLAQKTAEDFEAVLAP 318

Query: 127 NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY 168
            V G+ + +  A      +     +   SV+   GG G   Y
Sbjct: 319 KVDGLLN-LAQALA---DEPLDFFVLFSSVSAFFGGAGQADY 356

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 19/139 (13%)

Query: 135 MKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGI 191
           ++H   IM P   G  IS+  +A    I G G    + +K A+    + +A E G KY I
Sbjct: 161 LQHFGPIMNP--GGASISLTYIASERIIPGYG-GGMSSAKAALESDTRVLAFEAGRKYKI 217

Query: 192 RVNCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           RVN +S  P       A+  +       D M+    +   NA +Q  ELTA++V NA  F
Sbjct: 218 RVNTISAGPLGSRAAKAIGFI-------DDMI---EYSYANAPLQ-KELTADEVGNAAAF 266

Query: 250 LASDEARYISGTNLMVDGG 268
           LAS  A  I+G  + VD G
Sbjct: 267 LASPLASAITGATIYVDNG 285

Length = 303

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDT 68
             L G+ AL+TG + GIG  T ++    GA V +     A   + +  ++ ++ GG    
Sbjct: 2   GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI-EAAGGRASA 60

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA 102
                D+T EE V + +D   E+FG LD +V NA
Sbjct: 61  V--GADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.0 bits (109), Expect = 7e-06
 Identities = 64/266 (24%), Positives = 105/266 (39%), Gaps = 28/266 (10%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPC 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKG 130
           DV ++  + +      + +   D  V++ G +     D   +       F+   DI+   
Sbjct: 64  DVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 123

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
            F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G  
Sbjct: 124 -FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 180

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-----LTANDVA 244
           G+RVN +S   + T               A  G ++F    A+ +        +T  DV 
Sbjct: 181 GVRVNAISAGPIRT--------------LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVG 226

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
           N+  FL SD +  ISG  + VDGGF+
Sbjct: 227 NSAAFLCSDLSAGISGEVVHVDGGFS 252

Length = 262

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 23/201 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH--CDVT 76
           R  +ITG + G+GE+      + G  V      +N   +    L  + ++       D+ 
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN---KELTKLAEQYNSNLTFHSLDLQ 58

Query: 77  KEEDVCS---AVDLTVEKFGTLDI-MVNNAGISGAPCPDIREADLSEFEKVFDIN----- 127
              ++ +    +  ++++     I ++NNAG+  AP   I +A+  E      +N     
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSIHLINNAGMV-APIKPIEKAESEELITNVHLNLLAPM 117

Query: 128 -VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE- 185
            +   F  MKH       +    +I+I S A      G  AY  SK  +    + VA E 
Sbjct: 118 ILTSTF--MKHTKDW---KVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQ 172

Query: 186 -LGKYGIRVNCVSPYAVATGL 205
              +Y +++   SP  + T +
Sbjct: 173 EEEEYPVKIVAFSPGVMDTNM 193

Length = 251

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 16/191 (8%)

Query: 22  LITGGATGIG-ESTVRLF---HKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            ITG ++G G   T RL     +  A V   D  D+L  +    L      +    DVT 
Sbjct: 6   FITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRL------WVLQLDVTD 59

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAG--ISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              V + VD      G +D++V+NAG  + GA      E   ++  +  D N+ G    +
Sbjct: 60  SAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAA----EELSDAQIRRQIDTNLIGSIQVI 115

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + A   +  Q  G I+ + S  G I   G   Y  +K  + G  + VA E+  +GI    
Sbjct: 116 RAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTI 175

Query: 196 VSPYAVATGLA 206
           V P    T   
Sbjct: 176 VEPGPARTNFG 186

Length = 276

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 53/190 (27%), Positives = 74/190 (38%), Gaps = 22/190 (11%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           LITG ++GIG        + G +V  A     DV          SLG          D+ 
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR------MNSLGFTGILL----DLD 55

Query: 77  KEEDVCSAVDLTVE-KFGTLDIMVNNAG--ISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             E V  A D  +      L  + NNAG  + G P   I      + E+ F  N  G   
Sbjct: 56  DPESVERAADEVIALTDNRLYGLFNNAGFGVYG-PLSTISRQ---QMEQQFSTNFFGTHQ 111

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
                   M+P  +G I+   SV G I   G  AY  SK+A+   +  +  EL   GI+V
Sbjct: 112 LTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKV 171

Query: 194 NCVSPYAVAT 203
           + + P  + T
Sbjct: 172 SLIEPGPIRT 181

Length = 256

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 62/258 (24%), Positives = 90/258 (34%), Gaps = 72/258 (27%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
            ++ G    IG +  +L   HG +V  A      G+       G+        D+T E  
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITA------GRS-----SGDY-----QVDITDEA- 43

Query: 81  VCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKG------VFH 133
              ++    EK G  D +V+ AG    AP  ++ +AD         +N K       V H
Sbjct: 44  ---SIKALFEKVGHFDAIVSTAGDAEFAPLAELTDADFQ-----RGLNSKLLGQINLVRH 95

Query: 134 GMKHAA-RIMIPQTKGTI----ISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G+ +      I  T G +    I   + A  + G           A+ G  +  A EL +
Sbjct: 96  GLPYLNDGGSITLTSGILAQRPIPGGAAAATVNG-----------ALEGFVRAAAIELPR 144

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIR+N VSP  V   L        E   D   GF              + A DVA A +
Sbjct: 145 -GIRINAVSPGVVEESL--------EAYGDFFPGF------------EPVPAEDVAKAYV 183

Query: 249 FLASDEARYISGTNLMVD 266
                     +G  L VD
Sbjct: 184 RSVEGA---FTGQVLHVD 198

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 59/221 (26%)

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD----IREADLSEFEKVFDINV 128
           CDV  +E +  A     E+ G +D +V+   I+ A   +    + +     +    DI+ 
Sbjct: 62  CDVASDESIERAFATIKERVGKIDGIVH--AIAYAKKEELGGNVTDTSRDGYALAQDISA 119

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLNK--- 180
             +    K+A  ++ P    +I+++              Y GS+ A     V+G+ K   
Sbjct: 120 YSLIAVAKYARPLLNP--GASIVTL-------------TYFGSERAIPNYNVMGIAKAAL 164

Query: 181 --NV---AAELGKYGIRVNCVSPYAVATGLALAHLPE--------EERTEDAMVGFRNFV 227
             +V   A +LGK GIRVN +S  AV T LA+  +          + RT D         
Sbjct: 165 ESSVRYLARDLGKKGIRVNAISAGAVKT-LAVTGIKGHKDLLKESDSRTVD--------- 214

Query: 228 ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                  G  +T  +V N   FL SD +  ++G  + VD G
Sbjct: 215 -------GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 15/217 (6%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDTFFCHC 73
           L  +  L+TG + G+GE   + +   GA V +        ++V  ++   G P+ F    
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRF 63

Query: 74  DV-TKEEDVCSAVDLTVEK--FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
           D+ + EE        T+ +   G LD +V+ AG   A  P +    ++E+   + IN   
Sbjct: 64  DLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSP-LDFQTVAEWVNQYRINTVA 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG----SKHAVLGLNKNVAAEL 186
                    R + P  K +  +     G   G  P AY G    SK A+  L K  A E 
Sbjct: 123 PM----GLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEW 178

Query: 187 GKYG-IRVNCVSPYAVATGLALAHLPEEERTEDAMVG 222
            ++G +R N + P  + +   +   P E ++E    G
Sbjct: 179 ERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYG 215

Length = 239

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 23/262 (8%)

Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD-TFFCH 72
           L G+  LITG A    I  +  +L  KHGA++      + L ++V + L  E    F   
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRV-KPLAEEIGCNFVSE 64

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD--LSEFEKVFDINVKG 130
            DVT  + + +  D   EK+G+ D +++    +       R  D  L  F     I+   
Sbjct: 65  LDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYS 124

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKY 189
           +    + A  +M     G+I+++ +  GA   +  +   G +K A+    K +A ++G+ 
Sbjct: 125 LLELSRSAEALM--HDGGSIVTL-TYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGEN 181

Query: 190 GIRVNCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            IRVN +S  P       A+       ++  A    +    RN        T  DV  A 
Sbjct: 182 NIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLK----RNT-------TQEDVGGAA 230

Query: 248 LFLASDEARYISGTNLMVDGGF 269
           ++L S+ ++ ++G    VD G+
Sbjct: 231 VYLFSELSKGVTGEIHYVDCGY 252

Length = 260

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 2/112 (1%)

Query: 97  IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV 156
           +++NN G+S        E D    + +  +NV+G     +     M+ + KG II+I S 
Sbjct: 135 VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSG 194

Query: 157 AGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA 206
           A  +    P    Y  +K  +   ++ +  E  K GI V C  P  VAT +A
Sbjct: 195 AAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMA 246

Length = 320

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 58/197 (29%), Positives = 79/197 (40%), Gaps = 32/197 (16%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFFCHCD 74
             LITG  +GIG+     + K G +V IA      V D L  Q   S       F    D
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQV-IACGRNQSVLDELHTQ---SANIFTLAF----D 54

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA--DLSEFEKVFDINVKGVF 132
           VT      +A  L+   F   ++ + NAG     C  + +   D +   +VF++NV GV 
Sbjct: 55  VTDHPGTKAA--LSQLPF-IPELWIFNAG----DCEYMDDGKVDATLMARVFNVNVLGV- 106

Query: 133 HGMKHAARIMIPQT---KGTIISIC-SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
                A  I   Q     G  + I  S+A  +      AY  SK AV    + +  +L  
Sbjct: 107 -----ANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRP 161

Query: 189 YGIRVNCVSPYAVATGL 205
            GI V  V P  VAT L
Sbjct: 162 KGIEVVTVFPGFVATPL 178

Length = 240

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 43.3 bits (102), Expect = 8e-05
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGGEPDTFFC-HCDVTKE 78
            +ITG ++G+G +  +   + G    +   +D L  +Q  Q +G   D++   HCD+   
Sbjct: 4   VVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLASL 63

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINVKGVF 132
           + V   VD        LD +V NA +    A  P    AD   FE    +N  G F
Sbjct: 64  DSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEP-RFTAD--GFELTVGVNHLGHF 116

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 43/161 (26%), Positives = 60/161 (37%), Gaps = 13/161 (8%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +  LI G + GIG   VR +   G +V IA  +D       Q+LG E        DV   
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRV-IATARDAAALAALQALGAEALAL----DVADP 56

Query: 79  EDVCS-AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
             V   A  L  E    LD  V  AG+ G     +      +F+ V   NV G    +  
Sbjct: 57  ASVAGLAWKLDGEA---LDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPI 113

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHA---YTGSKHAV 175
               ++    G +  + S  G+IG         Y  SK A+
Sbjct: 114 LLP-LVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAAL 153

Length = 222

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 46/199 (23%), Positives = 71/199 (35%), Gaps = 37/199 (18%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIA--------DVQDNL---GQQVCQSLGGEPDTFF 70
           LI G  + I  +  R +   GA++ +A         + D+L   G     +   +     
Sbjct: 5   LIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTA 64

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR--EADLSEFEKVFDINV 128
            H      + + +  D+ +   GTL               D    EAD +   + F  N 
Sbjct: 65  SHAAF--LDSLPALPDIVLIAVGTL--------------GDQAACEADPALALREFRTNF 108

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL----GLNKNVAA 184
           +G    +   A     +  GTI+ I SVAG  G    + Y  +K A+     GL      
Sbjct: 109 EGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLR----N 164

Query: 185 ELGKYGIRVNCVSPYAVAT 203
            L K G+ V  V P  V T
Sbjct: 165 RLFKSGVHVLTVKPGFVRT 183

Length = 243

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 10/183 (5%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPD--TFFCHCDVTKE 78
           LITG ++G+G    R F   G  + + A   D L +   + L   P         DV   
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIR-EADLSEFEKVFDINVKGVFHGMK 136
           + V        ++ G LD ++ NAGI  GA     +  A+ +  E     N        +
Sbjct: 66  DQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAE----TNFVAALAQCE 121

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
            A  I   Q  G ++ I SV+   G  G   AY  SK  V  L + + AEL K  I+V+ 
Sbjct: 122 AAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVST 181

Query: 196 VSP 198
           + P
Sbjct: 182 IEP 184

Length = 248

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 63/277 (22%), Positives = 121/277 (43%), Gaps = 57/277 (20%)

Query: 18  GRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCH 72
           G+  LI G A    I     +   + GA++    + + L ++V    Q LG +   +   
Sbjct: 5   GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD---YVYE 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF----EKVFDINV 128
            DV+K E   S  +   +  G +D +V++  ++ AP    +EA    F    ++ F+I  
Sbjct: 62  LDVSKPEHFKSLAESLKKDLGKIDFIVHS--VAFAP----KEALEGSFLETSKEAFNI-- 113

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS-----KHAVLGLNKN-- 181
                 M+ +   +I  T+  ++ + +   ++  L   +Y G       + V+G+ K   
Sbjct: 114 -----AMEISVYSLIELTR-ALLPLLNDGASVLTL---SYLGGVKYVPHYNVMGVAKAAL 164

Query: 182 ------VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNAN 232
                 +A +LGK GIRVN +S   + T LA + + +          FR    +   NA 
Sbjct: 165 ESSVRYLAVDLGKKGIRVNAISAGPIKT-LAASGIGD----------FRMILKWNEINAP 213

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           ++   ++  +V N+ ++L SD +  ++G    VD G+
Sbjct: 214 LK-KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY 249

Length = 274

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 18/104 (17%)

Query: 171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-----AMVGFRN 225
           +K A+   N+ +A +LG  GIRVN V+   + T LA   +P  E  E+     A +G+  
Sbjct: 161 AKAALESTNRYLARDLGPRGIRVNLVAAGPIRT-LAAKAIPGFELLEEGWDERAPLGW-- 217

Query: 226 FVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
                 +++        VA AV+ L SD     +G  + VDGG 
Sbjct: 218 ------DVKDPT----PVARAVVALLSDWFPATTGEIVHVDGGA 251

Length = 256

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 26/181 (14%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R ALI G + G+G   V    + G +V  A V+        Q+L G       H +   +
Sbjct: 2   RTALIIGASRGLGLGLVDRLLERGWQV-TATVRGPQQDTALQALPG------VHIE-KLD 53

Query: 79  EDVCSAVDLTVEKFG--TLDIMVNNAGISGAPCPDIREADLSEFEKVF------DINVKG 130
            +  +++D  +++      D++  NAGISG       +A  +E  ++F       I +  
Sbjct: 54  MNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLAR 113

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPHA--YTGSKHAVLGLNKNVAAELG 187
              G        +   +G +  + S  G++    G     Y  SK A+  + ++  AELG
Sbjct: 114 RLLG-------QVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELG 166

Query: 188 K 188
           +
Sbjct: 167 E 167

Length = 225

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC---D 74
           G+V +ITG  +GIG  T R F  HGA V +A    +        +  E           D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +     V    +    K   L ++V NA +   P     +      E  F +N  G F+
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDG----LETTFQVNHLGHFY 115

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +A  LG  GIR N +S   + T LA + + +  +  D       FV  NA ++   +T  
Sbjct: 173 LAVSLGPKGIRANGISAGPIKT-LAASGIKDFGKILD-------FVESNAPLR-RNVTIE 223

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           +V N   FL SD A  ++G    VD GF +V
Sbjct: 224 EVGNVAAFLLSDLASGVTGEITHVDSGFNAV 254

Length = 260

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKV---CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           GR  LITG  +GIG++      K G  V   C    +    ++  ++  G  + F    D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPC-PDIREADLSEFEKVFDINVKGVF 132
           ++  + V   V+   E+   L +++NNAG     C  + RE      EK F  N  G +
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAG-----CMVNKRELTEDGLEKNFATNTLGTY 114

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK08177	225	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.98
PRK08264	238	short chain dehydrogenase; Validated	99.98
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.96
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.9
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.88
PLN02572	442	UDP-sulfoquinovose synthase	99.87
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.87
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.86
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.86
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.85
PLN00198	338	anthocyanidin reductase; Provisional	99.85
PLN02214	342	cinnamoyl-CoA reductase	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.84
PRK06720	169	hypothetical protein; Provisional	99.84
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.83
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.83
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.82
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.82
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.82
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.81
PLN02240	352	UDP-glucose 4-epimerase	99.81
PLN02686	367	cinnamoyl-CoA reductase	99.8
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.8
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.79
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.78
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.77
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.77
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.77
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.76
PLN02427	386	UDP-apiose/xylose synthase	99.76
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.76
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.74
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.73
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.72
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.71
PLN02260	668	probable rhamnose biosynthetic enzyme	99.71
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.7
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.69
PLN02206	442	UDP-glucuronate decarboxylase	99.68
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.67
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.66
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.66
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.65
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.65
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.63
CHL00194	317	ycf39 Ycf39; Provisional	99.61
PLN02996	491	fatty acyl-CoA reductase	99.61
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.58
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.56
PRK07201	657	short chain dehydrogenase; Provisional	99.55
PRK05865	854	hypothetical protein; Provisional	99.52
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.5
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.5
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.49
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.47
PLN02778	298	3,5-epimerase/4-reductase	99.46
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.44
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.42
PRK08309	177	short chain dehydrogenase; Provisional	99.41
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.41
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.4
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.39
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.36
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.31
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.29
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.29
PLN02503	605	fatty acyl-CoA reductase 2	99.28
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.23
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.23
PLN02260	668	probable rhamnose biosynthetic enzyme	99.23
PLN00016	378	RNA-binding protein; Provisional	99.22
PRK12320	699	hypothetical protein; Provisional	99.22
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.13
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.04
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.9
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.89
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.83
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.79
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.76
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.74
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.63
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.62
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.62
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.59
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.58
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.5
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.31
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.26
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.18
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.18
PRK09620	229	hypothetical protein; Provisional	98.17
COG2910	211	Putative NADH-flavin reductase [General function p	98.14
PLN00106	323	malate dehydrogenase	98.13
PRK14982	340	acyl-ACP reductase; Provisional	98.1
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.03
PTZ00325	321	malate dehydrogenase; Provisional	97.98
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.88
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.84
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.8
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.78
KOG2774	366	consensus NAD dependent epimerase [General functio	97.77
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.73
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.71
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.7
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.67
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.66
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.63
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.58
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.49
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.47
PRK06849	389	hypothetical protein; Provisional	97.47
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.4
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.38
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.38
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.31
PRK05086	312	malate dehydrogenase; Provisional	97.31
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.23
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.19
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.17
COG3268	382	Uncharacterized conserved protein [Function unknow	97.17
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.15
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.15
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.14
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.14
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.12
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.11
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.11
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.11
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.11
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.11
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.1
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.08
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.08
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.04
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.03
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.02
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.01
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.0
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.99
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.96
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.95
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.89
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.88
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.87
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.87
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.82
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.82
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.81
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.79
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.78
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.75
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.73
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.69
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.63
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.63
PRK14968	188	putative methyltransferase; Provisional	96.62
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.6
PLN02928	347	oxidoreductase family protein	96.57
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.55
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.55
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.53
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.52
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.52
PRK04148	134	hypothetical protein; Provisional	96.5
PLN00203	519	glutamyl-tRNA reductase	96.5
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.48
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.46
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.45
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.45
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.44
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.43
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.42
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.41
PRK09496	453	trkA potassium transporter peripheral membrane com	96.36
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.34
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.31
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.25
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.24
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.21
PLN02494	477	adenosylhomocysteinase	96.16
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.15
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.15
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.14
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.14
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.13
PTZ00117	319	malate dehydrogenase; Provisional	96.11
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.08
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.07
PRK13243	333	glyoxylate reductase; Reviewed	96.04
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.03
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.01
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.01
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.99
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.99
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.93
PRK06932	314	glycerate dehydrogenase; Provisional	95.87
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.86
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.86
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.85
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.85
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.84
PRK08223	287	hypothetical protein; Validated	95.83
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.81
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.8
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.8
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.8
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.8
PRK09496	453	trkA potassium transporter peripheral membrane com	95.78
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.75
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.75
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.73
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.73
PRK08328	231	hypothetical protein; Provisional	95.73
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.72
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.7
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.69
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.68
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.66
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.63
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.63
PRK12480	330	D-lactate dehydrogenase; Provisional	95.63
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.62
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	95.61
PRK08655	437	prephenate dehydrogenase; Provisional	95.6
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.59
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.58
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.57
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.57
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.56
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.55
PRK06487	317	glycerate dehydrogenase; Provisional	95.55
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.55
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.55
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.54
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.54
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.5
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.49
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.49
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.47
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.46
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.45
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.45
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.39
PRK14967	223	putative methyltransferase; Provisional	95.37
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.36
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.35
PLN02740	381	Alcohol dehydrogenase-like	95.34
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.34
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.33
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.31
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	95.27
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.26
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.26
PLN03139	386	formate dehydrogenase; Provisional	95.26
PRK07877	722	hypothetical protein; Provisional	95.25
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.24
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.2
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.2
PLN02514	357	cinnamyl-alcohol dehydrogenase	95.2
PRK06223	307	malate dehydrogenase; Reviewed	95.19
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.16
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.15
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.14
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.12
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.12
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.1
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.07
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.07
PRK14851	679	hypothetical protein; Provisional	95.06
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	95.05
PTZ00354	334	alcohol dehydrogenase; Provisional	95.05
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.04
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.94
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.93
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.91
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.9
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	94.89
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.87
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.85

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=7.4e-50  Score=308.79  Aligned_cols=246  Identities=37%  Similarity=0.560  Sum_probs=222.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ...++.|+++||||++|||++++..|+++|++|++++++....++....+........+.||++++.+++.++++..+.+
T Consensus         9 ~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen    9 VQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HHHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence            44678999999999999999999999999999999999999888888888876677788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC--CCceEEEEccccccccCCCCccchh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +.++++|||||+..+  ..+-..+.++|++.+.+|+.+.|+.+|++.+.|...  ...+||+|||+-+..+..++..|++
T Consensus        89 g~psvlVncAGItrD--~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAA  166 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRD--GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAA  166 (256)
T ss_pred             CCCcEEEEcCccccc--cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhh
Confidence            999999999999987  788889999999999999999999999999984443  3459999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+++.+|+|..|+|++.+|||||+|+||++.|||.....|.          .........+ .+|+..+||||..++||
T Consensus       167 sK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~----------v~~ki~~~iP-mgr~G~~EevA~~V~fL  235 (256)
T KOG1200|consen  167 SKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK----------VLDKILGMIP-MGRLGEAEEVANLVLFL  235 (256)
T ss_pred             hcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH----------HHHHHHccCC-ccccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998775443          2222233334 49999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+.+.|+||+.+.++||+.+
T Consensus       236 AS~~ssYiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  236 ASDASSYITGTTLEVTGGLAM  256 (256)
T ss_pred             hccccccccceeEEEeccccC
Confidence            999999999999999999864

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-47  Score=326.32  Aligned_cols=255  Identities=23%  Similarity=0.256  Sum_probs=215.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+..  ..++.++.+|++++++++++++++. .
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            458899999999999999999999999999999999998887777666532  2467889999999999999999986 5


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+++..|+++
T Consensus        83 ~g~iD~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~as  160 (263)
T PRK08339         83 IGEPDIFFFSTGGPKP--GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVV  160 (263)
T ss_pred             hCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHH
Confidence            7999999999998654  67889999999999999999999999999999988878999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      |+|+++|+++++.|++++|||||+|+||+++|++............. ..........+. .+.+++.+|+|+|++++||
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~p~dva~~v~fL  239 (263)
T PRK08339        161 RISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP-IPLGRLGEPEEIGYLVAFL  239 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc-CCcccCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999986432110000000 000011112222 3458999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...+++|+++.+|||+..+
T Consensus       240 ~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        240 ASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             hcchhcCccCceEEECCCcccc
Confidence            9999999999999999998764

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=8.7e-47  Score=324.43  Aligned_cols=268  Identities=79%  Similarity=1.268  Sum_probs=228.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+....++.++.+|++|++++.++++.+.+.+
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999999999887777776666544578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||.......++.+.+.++|++.+++|+.+++.+++++++.|.++..|+|++++|..+..+.++...|+++|
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  172 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSK  172 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHH
Confidence            99999999999865432567889999999999999999999999999999877779999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|++++++.++.|++.+||+|++++||.++|++.....+...........+..+..+...+.++..+|+|+|+++++|++
T Consensus       173 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s  252 (280)
T PLN02253        173 HAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLAS  252 (280)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999865544332211111111222222223333567899999999999999


Q ss_pred             CCCCCeeecEEEeCCccccccccccccC
Q 023613          253 DEARYISGTNLMVDGGFTSVNHSLRVFR  280 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~~~~~~~~~  280 (280)
                      +...+++|+++.+|||+...+.++++||
T Consensus       253 ~~~~~i~G~~i~vdgG~~~~~~~~~~~~  280 (280)
T PLN02253        253 DEARYISGLNLMIDGGFTCTNHSLRVFR  280 (280)
T ss_pred             cccccccCcEEEECCchhhccchheecC
Confidence            9999999999999999999999999997

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-46  Score=320.43  Aligned_cols=247  Identities=23%  Similarity=0.291  Sum_probs=204.8

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++|++|||||++  |||+++|++|+++|++|++++|++...+...+.........++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            47899999999996  9999999999999999999999764333322221111223568999999999999999999999


Q ss_pred             CCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           93 GTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++|++|||||+....  ..++.+.+.++|++.+++|+.+++.++++++|+|.+  +|+||+++|..+..+.+++..|++
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  161 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGV  161 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhh
Confidence            9999999999986421  146778999999999999999999999999999963  489999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+.+|+++++.|++++|||||+|+||+++|++.... .....       ...+..+. .+.+++.+|+|+|++++||
T Consensus       162 sKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~-~~~~~-------~~~~~~~~-~p~~r~~~peeva~~~~fL  232 (271)
T PRK06505        162 AKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI-GDARA-------IFSYQQRN-SPLRRTVTIDEVGGSALYL  232 (271)
T ss_pred             hHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccC-cchHH-------HHHHHhhc-CCccccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999985432 11100       11112222 2348899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...++||+++.+|||+...
T Consensus       233 ~s~~~~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        233 LSDLSSGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             hCccccccCceEEeecCCcccC
Confidence            9999999999999999997643

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.3e-46  Score=316.15  Aligned_cols=246  Identities=22%  Similarity=0.271  Sum_probs=208.3

Q ss_pred             ccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +..+++|++|||||+  +|||+++|++|+++|++|++++|+++ .++..+++.. ..+.++.||++++++++++++++.+
T Consensus         2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR-MKKSLQKLVD-EEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             ccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH-HHHHHHhhcc-CceeEEeCCCCCHHHHHHHHHHHHH
Confidence            445789999999999  89999999999999999999999843 3333344432 3577889999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           91 KFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      +++++|++|||||+....  ..++.+.+.++|++.+++|+.+++.+++.++|.|.+  .|+||+++|..+..+.+++..|
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y  157 (252)
T PRK06079         80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVM  157 (252)
T ss_pred             HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhh
Confidence            999999999999986421  156788999999999999999999999999999954  5899999999999888999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|+|+++|+++++.|++++||+||+|+||+++|++.....+.+.        ......+. .+.+++.+|+|||++++
T Consensus       158 ~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~pedva~~~~  228 (252)
T PRK06079        158 GIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKD--------LLKESDSR-TVDGVGVTIEEVGNTAA  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHH--------HHHHHHhc-CcccCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998644322111        11111222 34489999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ||+++..++++|+++.+|||+..
T Consensus       229 ~l~s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        229 FLLSDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             HHhCcccccccccEEEeCCceec
Confidence            99999999999999999999753

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-46  Score=316.38  Aligned_cols=252  Identities=30%  Similarity=0.461  Sum_probs=217.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+..   ..++.++.||+++++++.++++++.
T Consensus         2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          2 MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999998888877776653   3567889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|++|||||....  .+..+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||..+..+.+++..|+
T Consensus        82 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (260)
T PRK07063         82 EAFGPLDVLVNNAGINVF--ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYP  159 (260)
T ss_pred             HHhCCCcEEEECCCcCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHH
Confidence            999999999999998654  556778899999999999999999999999999877779999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|+|+++|++.++.|++++||+||+|+||+++|++.............    ....... ..+.+++.+|+|+|++++|
T Consensus       160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~----~~~~~~~-~~~~~r~~~~~~va~~~~f  234 (260)
T PRK07063        160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAA----ARAETLA-LQPMKRIGRPEEVAMTAVF  234 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHH----HHHHHHh-cCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999986543221111100    1111112 2334899999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++.+.+++|+++.+|||+..
T Consensus       235 l~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        235 LASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             HcCccccccCCcEEEECCCeee
Confidence            9999999999999999999865

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=7e-46  Score=299.73  Aligned_cols=230  Identities=34%  Similarity=0.497  Sum_probs=205.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ..+++|+++|||||||||.++|+.|+++|++|++++|+.++++++++++.. ..+..+..|++|.++++++++.+.+.|+
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            346789999999999999999999999999999999999999999999886 6788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|+||||||....  .++.+.+.++|++++++|+.|.++.+++++|.|.+++.|.||++||+++.++.|+...||++|+
T Consensus        81 ~iDiLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~  158 (246)
T COG4221          81 RIDILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA  158 (246)
T ss_pred             cccEEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence            99999999999865  8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      ++.+|++.|+.|+..++|||..|.||.+.|+.........+..     .....++.     ....+|+|+|++++|..+.
T Consensus       159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~-----~~~~~y~~-----~~~l~p~dIA~~V~~~~~~  228 (246)
T COG4221         159 AVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDE-----RADKVYKG-----GTALTPEDIAEAVLFAATQ  228 (246)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhh-----hHHHHhcc-----CCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999776544433332111     12222222     5678999999999999986


Q ss_pred             CCC
Q 023613          254 EAR  256 (280)
Q Consensus       254 ~~~  256 (280)
                      ...
T Consensus       229 P~~  231 (246)
T COG4221         229 PQH  231 (246)
T ss_pred             CCc
Confidence            543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-45  Score=313.00  Aligned_cols=250  Identities=22%  Similarity=0.262  Sum_probs=205.6

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++||++|||||++  |||+++|++|+++|++|++++|++. .++..+++... ....++.||++|+++++++++.+.+.
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            46799999999997  9999999999999999999988742 22222333211 22345789999999999999999999


Q ss_pred             cCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           92 FGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++|++|||||+...  ...++.+.+.++|++.+++|+.+++.+++.++|.|.+  +|+||++||..+..+.+++..|+
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  161 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMG  161 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchh
Confidence            9999999999997532  1146778999999999999999999999999999953  58999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.... +....      .... .... .+.+++.+|+|+|++++|
T Consensus       162 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~~~------~~~~-~~~~-~p~~r~~~pedva~~~~~  232 (260)
T PRK06603        162 VAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-GDFST------MLKS-HAAT-APLKRNTTQEDVGGAAVY  232 (260)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-CCcHH------HHHH-HHhc-CCcCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999975432 11000      0111 1122 244889999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccccccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      |+++...+++|+.+.+|||+.. .+|++
T Consensus       233 L~s~~~~~itG~~i~vdgG~~~-~~~~~  259 (260)
T PRK06603        233 LFSELSKGVTGEIHYVDCGYNI-MGSNK  259 (260)
T ss_pred             HhCcccccCcceEEEeCCcccc-cCcCC
Confidence            9999999999999999999655 66654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-45  Score=312.34  Aligned_cols=244  Identities=33%  Similarity=0.483  Sum_probs=208.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.. ...+..+..  ..++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999988642 222222222  2467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++|
T Consensus        82 g~iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~as  159 (251)
T PRK12481         82 GHIDILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTAS  159 (251)
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHH
Confidence            999999999998755  6788899999999999999999999999999997654 5899999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|++.++.|++++||+||+|+||+++|++..........       .... .. ..+.+++.+|+|+|++++||+
T Consensus       160 K~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~-------~~~~-~~-~~p~~~~~~peeva~~~~~L~  230 (251)
T PRK12481        160 KSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTAR-------NEAI-LE-RIPASRWGTPDDLAGPAIFLS  230 (251)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHH-------HHHH-Hh-cCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986543211110       1111 12 234588999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccc
Q 023613          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++...+++|+.+.+|||+.
T Consensus       231 s~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        231 SSASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             CccccCcCCceEEECCCEe
Confidence            9999999999999999964

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-45  Score=314.58  Aligned_cols=258  Identities=24%  Similarity=0.344  Sum_probs=218.5

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+..   ..++.++.+|++++++++++++++
T Consensus         2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998877776665532   246778899999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+.++++|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..+.++...|
T Consensus        82 ~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  159 (265)
T PRK07062         82 EARFGGVDMLVNNAGQGRV--STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVAT  159 (265)
T ss_pred             HHhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHh
Confidence            9999999999999998754  67888999999999999999999999999999988778999999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhh-hhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT-EDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      +++|+|+.+|+++++.|++++||+||+|+||+++|++....+...... ................+.+++.+|+|+|+++
T Consensus       160 ~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~  239 (265)
T PRK07062        160 SAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARAL  239 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999865432211000 0000111111112233458999999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++|+++...+++|+++.+|||+..
T Consensus       240 ~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        240 FFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHhCchhcccccceEEEcCceEe
Confidence            999999889999999999999764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-45  Score=315.52  Aligned_cols=247  Identities=20%  Similarity=0.261  Sum_probs=205.4

Q ss_pred             cCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcc---hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           16 LVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDN---LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        16 l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++|++|||||+  +|||+++|++|+++|++|++++|+++   .++++.+++.  .. .++.||++|+++++++++++.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~--~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG--SD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence            579999999997  89999999999999999999999853   2333333332  23 5788999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           91 KFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .++++|++|||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+.+..|
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y  157 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVM  157 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhh
Confidence            99999999999998532  1256788999999999999999999999999999964  4899999999999888999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|++.... +....       ...+.... .+.+++.+|+|||++++
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~~~-------~~~~~~~~-~pl~r~~~pedva~~v~  228 (274)
T PRK08415        158 GVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI-GDFRM-------ILKWNEIN-APLKKNVSIEEVGNSGM  228 (274)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc-chhhH-------Hhhhhhhh-CchhccCCHHHHHHHHH
Confidence            99999999999999999999999999999999999875432 11000       11111122 23488999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccccccccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      ||+++...+++|+.+.+|||+.. .+.++
T Consensus       229 fL~s~~~~~itG~~i~vdGG~~~-~~~~~  256 (274)
T PRK08415        229 YLLSDLSSGVTGEIHYVDAGYNI-MGMGA  256 (274)
T ss_pred             HHhhhhhhcccccEEEEcCcccc-cCCCc
Confidence            99999899999999999999765 34443

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.5e-45  Score=311.05  Aligned_cols=258  Identities=42%  Similarity=0.597  Sum_probs=219.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ...|.||++||||+++|||+++|+.|+++|++|++++|+++.++...+.+..    ..++..+.||++++++++++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999988877766543    246889999999999999999999


Q ss_pred             HHH-cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhH-hHHHHHHHHHHhcccCCCceEEEEccccccccCCCC-
Q 023613           89 VEK-FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK-GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP-  165 (280)
Q Consensus        89 ~~~-~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-  165 (280)
                      .+. +|++|++|||||..... .++.+.+.++|++.+++|+. +.+++.+.+.+.+.+++.|.|+++||..+..+.++. 
T Consensus        83 ~~~~~GkidiLvnnag~~~~~-~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~  161 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLT-GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG  161 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCC-CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence            998 69999999999998753 47999999999999999999 577888888888877788999999999998886666 


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHH-HhhhccCCCCCCCHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF-VARNANMQGTELTANDVA  244 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva  244 (280)
                      ..|+++|+|+++|+|++|.||+++|||||+|+||.+.|++......... .    ..+... ..+...+.+++..|+|++
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~-~----~~~~~~~~~~~~~p~gr~g~~~eva  236 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGE-M----EEFKEATDSKGAVPLGRVGTPEEVA  236 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccch-h----hHHhhhhccccccccCCccCHHHHH
Confidence            7999999999999999999999999999999999999998221111110 0    011111 112334569999999999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCCccccccccc
Q 023613          245 NAVLFLASDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      +.+.||+++++.|++|+.+.+|||++...+..
T Consensus       237 ~~~~fla~~~asyitG~~i~vdgG~~~~~~~~  268 (270)
T KOG0725|consen  237 EAAAFLASDDASYITGQTIIVDGGFTVVGPSL  268 (270)
T ss_pred             HhHHhhcCcccccccCCEEEEeCCEEeecccc
Confidence            99999999988899999999999999877654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.2e-45  Score=310.43  Aligned_cols=245  Identities=22%  Similarity=0.320  Sum_probs=205.6

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchH---HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLG---QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        14 ~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|+.+..   +++.+++.   ...++.||++++++++++++.+
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD---APIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc---cceEEecCcCCHHHHHHHHHHH
Confidence            35789999999998  5999999999999999999999986432   33333332   3567899999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           89 VEKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      .+.++++|++|||||+....  ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+|+++||..+..+.+++.
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~  160 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYN  160 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccch
Confidence            99999999999999986421  146778999999999999999999999999999953  58999999999988888999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|+++|+|+.+|+++++.|++++||+||+|+||+++|++..........       ...+ ... .+.+++.+|+|+|++
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~-------~~~~-~~~-~p~~r~~~p~dva~~  231 (258)
T PRK07533        161 LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDAL-------LEDA-AER-APLRRLVDIDDVGAV  231 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHH-------HHHH-Hhc-CCcCCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999986542111100       1111 122 234889999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++||+++...+++|+.+.+|||+..+
T Consensus       232 ~~~L~s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        232 AAFLASDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             HHHHhChhhccccCcEEeeCCccccc
Confidence            99999998899999999999998653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.9e-45  Score=309.22  Aligned_cols=245  Identities=21%  Similarity=0.243  Sum_probs=202.4

Q ss_pred             cCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa--~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|++|||||  ++|||+++|++|+++|++|++++|++. .++..+++. .......+.||++|+++++++++++.+.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            78999999997  679999999999999999999887643 222233332 21334578999999999999999999999


Q ss_pred             CCccEEEECCCCCCCC---CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           93 GTLDIMVNNAGISGAP---CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +++|++|||||+....   ...+.+.+.++|++.+++|+.+++.++++++|.|+++ .|+||++||..+..+.+++..|+
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~  161 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMG  161 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccch
Confidence            9999999999986431   0124567889999999999999999999999998654 48999999999998999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|+|+.+|++.++.|++++||+||+|+||+++|++.........       ....+ .+. .+.+++.+|+|||++++|
T Consensus       162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~-------~~~~~-~~~-~p~~r~~~peevA~~v~~  232 (261)
T PRK08690        162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGK-------LLGHV-AAH-NPLRRNVTIEEVGNTAAF  232 (261)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHH-------HHHHH-hhc-CCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998643311110       01111 222 244899999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+.+.+|||+..
T Consensus       233 l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        233 LLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             HhCcccCCcceeEEEEcCCccc
Confidence            9999999999999999999865

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=5.8e-45  Score=309.54  Aligned_cols=248  Identities=25%  Similarity=0.323  Sum_probs=205.7

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcc--hHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDN--LGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        14 ~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .++++|+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++... ..+.++.+|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            35789999999986  89999999999999999998876543  223333333222 34667899999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           89 VEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      .+.++++|++|||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+++.
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~  159 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYN  159 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccc
Confidence            9999999999999998642  1256788999999999999999999999999999964  48999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|+++|+|+.+|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|++++
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~~~dva~~  230 (258)
T PRK07370        160 VMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILD--------MIHHVEEK-APLRRTVTQTEVGNT  230 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchh--------hhhhhhhc-CCcCcCCCHHHHHHH
Confidence            999999999999999999999999999999999999997643211001        00111122 234899999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++||+++...+++|+++.+|||+...
T Consensus       231 ~~fl~s~~~~~~tG~~i~vdgg~~~~  256 (258)
T PRK07370        231 AAFLLSDLASGITGQTIYVDAGYCIM  256 (258)
T ss_pred             HHHHhChhhccccCcEEEECCccccc
Confidence            99999999999999999999997653

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-45  Score=307.59  Aligned_cols=244  Identities=33%  Similarity=0.473  Sum_probs=210.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+... .++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999988888777766432 467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccC-C-CCccch
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGG-L-GPHAYT  169 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~-~-~~~~Y~  169 (280)
                      +++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++|+++||..+.... + .+..|+
T Consensus        85 g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~  162 (253)
T PRK05867         85 GGIDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYC  162 (253)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchH
Confidence            999999999998754  6788899999999999999999999999999997654 5799999998876543 3 457999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|+|+++|+++++.|++++||+||+|+||+++|++......   .       ...+ ... .+.+++.+|+|+|++++|
T Consensus       163 asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~---~-------~~~~-~~~-~~~~r~~~p~~va~~~~~  230 (253)
T PRK05867        163 ASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE---Y-------QPLW-EPK-IPLGRLGRPEELAGLYLY  230 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH---H-------HHHH-Hhc-CCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999998643211   0       1111 122 234899999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...++||+.+.+|||+..
T Consensus       231 L~s~~~~~~tG~~i~vdgG~~~  252 (253)
T PRK05867        231 LASEASSYMTGSDIVIDGGYTC  252 (253)
T ss_pred             HcCcccCCcCCCeEEECCCccC
Confidence            9999999999999999999753

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-44  Score=307.27  Aligned_cols=247  Identities=21%  Similarity=0.294  Sum_probs=207.8

Q ss_pred             ccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCc---chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQD---NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        13 ~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      +.++++|++|||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++. ..++.++.+|++|++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE-GQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHHH
Confidence            456889999999997  8999999999999999999998753   34455555443 24677889999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC
Q 023613           88 TVEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  165 (280)
                      +.+.++++|++|||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+++
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~  158 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNY  158 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCC
Confidence            99999999999999998642  1256778899999999999999999999999999954  5899999999999998999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+++|+|+++|+++++.|++++||+||+|+||+++|++.....+.. ..      ... .... .+.+++.+|+|+|+
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~-~~------~~~-~~~~-~p~~r~~~p~~va~  229 (257)
T PRK08594        159 NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFN-SI------LKE-IEER-APLRRTTTQEEVGD  229 (257)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcccc-HH------HHH-Hhhc-CCccccCCHHHHHH
Confidence            999999999999999999999999999999999999999754321100 00      111 1122 23488999999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++||+++..++++|+.+.+|||+..
T Consensus       230 ~~~~l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        230 TAAFLFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             HHHHHcCcccccccceEEEECCchhc
Confidence            99999999999999999999999753

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-44  Score=306.02  Aligned_cols=247  Identities=35%  Similarity=0.511  Sum_probs=214.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.++++.+.+.. ..++.++.||++++++++++++++.+.++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999998888777666643 24688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+.+.++||++||..+. .+.+++..|++||
T Consensus        83 ~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (254)
T PRK07478         83 GLDIAFNNAGTLGEM-GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASK  161 (254)
T ss_pred             CCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHH
Confidence            999999999986432 56788899999999999999999999999999988878999999998886 5678899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.|+.++||+|++|+||+++|++.+.......        ...+.... .+.+++.+|+|+|+.+++|++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~va~~~~~l~s  232 (254)
T PRK07478        162 AGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPE--------ALAFVAGL-HALKRMAQPEEIAQAALFLAS  232 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHH--------HHHHHHhc-CCCCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999998654321111        11222222 234788999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||+..
T Consensus       233 ~~~~~~~G~~~~~dgg~~~  251 (254)
T PRK07478        233 DAASFVTGTALLVDGGVSI  251 (254)
T ss_pred             chhcCCCCCeEEeCCchhc
Confidence            9889999999999999765

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.5e-44  Score=308.00  Aligned_cols=251  Identities=30%  Similarity=0.475  Sum_probs=212.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++|+ +.+++..+.+.. ..++.++.||+++++++.++++++.+.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999999 666666665543 34688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|+|.+++ |+||++||..+..+.++...|+++|+
T Consensus        82 ~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         82 RVDVLFNNAGVDNAA-GRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             CcCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHH
Confidence            999999999986432 5677889999999999999999999999999997654 89999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      |+++|++.++.|++++||+||+|+||+++|++.....+.......  ..+..... ...+.+++.+|+|+|+++++|+++
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~va~~~~~l~s~  236 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAG--KTFRENQK-WMTPLGRLGKPEEVAKLVVFLASD  236 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHH--HHHhhhhh-ccCCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999987654322111000  00111111 123458899999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||...
T Consensus       237 ~~~~~~G~~i~vdgg~~~  254 (272)
T PRK08589        237 DSSFITGETIRIDGGVMA  254 (272)
T ss_pred             hhcCcCCCEEEECCCccc
Confidence            889999999999999764

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-44  Score=304.54  Aligned_cols=252  Identities=29%  Similarity=0.416  Sum_probs=216.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  .++.++.||+++++++.++++.+.+.++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG--ERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999999999999999887777666653  4677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .. .+.+.++|++.+++|+.+++.++++++|.|. ++.|+||++||..+..+.+++..|+++|+
T Consensus        80 ~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKa  155 (261)
T PRK08265         80 RVDILVNLACTYLD--DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKA  155 (261)
T ss_pred             CCCEEEECCCCCCC--Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHH
Confidence            99999999998653  33 3578899999999999999999999999997 55799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++++++.++.|++++||++|+|+||+++|++...........      .... .....+.+++.+|+|+|+++++|+++
T Consensus       156 a~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~------~~~~-~~~~~p~~r~~~p~dva~~~~~l~s~  228 (261)
T PRK08265        156 AIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAK------ADRV-AAPFHLLGRVGDPEEVAQVVAFLCSD  228 (261)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhH------HHHh-hcccCCCCCccCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999865432211100      1111 11123458899999999999999999


Q ss_pred             CCCCeeecEEEeCCccccccccccc
Q 023613          254 EARYISGTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~~~~~~  278 (280)
                      ...+++|+.+.+|||+....+..++
T Consensus       229 ~~~~~tG~~i~vdgg~~~~~~~~~~  253 (261)
T PRK08265        229 AASFVTGADYAVDGGYSALGPEQGV  253 (261)
T ss_pred             cccCccCcEEEECCCeeccCCCCCC
Confidence            8999999999999999887766543

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-44  Score=304.34  Aligned_cols=248  Identities=31%  Similarity=0.462  Sum_probs=211.4

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+.++++|++|||||++|||+++|++|+++|++|++++|+.+ .+++..+.+.. ..++.++.+|++++++++++++++.
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999754 34555555432 2467788999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC--Ccc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--PHA  167 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~--~~~  167 (280)
                      +.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++  +..
T Consensus        82 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  159 (254)
T PRK06114         82 AELGALTLAVNAAGIANA--NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAH  159 (254)
T ss_pred             HHcCCCCEEEECCCCCCC--CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcch
Confidence            999999999999998764  6788899999999999999999999999999998877899999999988776553  689


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+++|+|++++++.++.|+.++||+||+|+||+++|++....  ....       ......+. .+.+++.+|+|+++++
T Consensus       160 Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~~~~-------~~~~~~~~-~p~~r~~~~~dva~~~  229 (254)
T PRK06114        160 YNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--EMVH-------QTKLFEEQ-TPMQRMAKVDEMVGPA  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--cchH-------HHHHHHhc-CCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999986431  1000       01111222 3458999999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +||+++..++++|+++.+|||+..
T Consensus       230 ~~l~s~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        230 VFLLSDAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             HHHcCccccCcCCceEEECcCEec
Confidence            999999999999999999999753

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.3e-44  Score=307.01  Aligned_cols=243  Identities=23%  Similarity=0.275  Sum_probs=203.2

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCc---chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQD---NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      -+++|++|||||+  +|||+++|+.|+++|++|++++|++   +.++++.+++   .....+.+|++++++++++++++.
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL---GAFVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc---CCceEEecCCCCHHHHHHHHHHHH
Confidence            4679999999997  8999999999999999999998874   2333333333   234568999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023613           90 EKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  167 (280)
                      +.++++|++|||||+....  ..++.+.+.++|++.+++|+.+++.++++++|.|.+  +|+||+++|..+..+.|++..
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~  161 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNV  161 (272)
T ss_pred             HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchh
Confidence            9999999999999986421  156778999999999999999999999999999854  489999999988888899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+++|+|+.+|+++++.|++++||+||+|+||+++|++.... +....       ...+... ..+.+++.+|+|+|+++
T Consensus       162 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~~~-------~~~~~~~-~~p~~r~~~peevA~~~  232 (272)
T PRK08159        162 MGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GDFRY-------ILKWNEY-NAPLRRTVTIEEVGDSA  232 (272)
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-CcchH-------HHHHHHh-CCcccccCCHHHHHHHH
Confidence            999999999999999999999999999999999999875432 11000       1111112 23448899999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +||+++...+++|+++.+|||+..
T Consensus       233 ~~L~s~~~~~itG~~i~vdgG~~~  256 (272)
T PRK08159        233 LYLLSDLSRGVTGEVHHVDSGYHV  256 (272)
T ss_pred             HHHhCccccCccceEEEECCCcee
Confidence            999999999999999999999764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.4e-44  Score=304.42  Aligned_cols=245  Identities=22%  Similarity=0.256  Sum_probs=201.4

Q ss_pred             cCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecC---cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           16 LVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        16 l~~k~vlItGa--~~giG~~la~~l~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++|++|||||  ++|||+++|++|+++|++|++++|.   .+.++++.+...   ...++.+|++|+++++++++.+.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC---CcceeeccCCCHHHHHHHHHHHHH
Confidence            67999999996  6899999999999999999998654   333333333322   234678999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCC---CCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023613           91 KFGTLDIMVNNAGISGAPC---PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  167 (280)
                      .++++|++|||||+.....   ..+.+.+.++|++.+++|+.+++.++++++|+|.  +.|+||++||..+..+.+++..
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~  158 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNT  158 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcch
Confidence            9999999999999864310   1245678999999999999999999999999994  3589999999999888899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+++|+|+.+|+++++.|++++||+||+|+||+++|++.........        ......... +.+++.+|+|+++++
T Consensus       159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~--------~~~~~~~~~-p~~r~~~pedva~~~  229 (260)
T PRK06997        159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGK--------ILDFVESNA-PLRRNVTIEEVGNVA  229 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhh--------HHHHHHhcC-cccccCCHHHHHHHH
Confidence            99999999999999999999999999999999999987543211000        111112222 448899999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCccccccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +||+++...+++|+.+.+|||+...-+
T Consensus       230 ~~l~s~~~~~itG~~i~vdgg~~~~~~  256 (260)
T PRK06997        230 AFLLSDLASGVTGEITHVDSGFNAVVG  256 (260)
T ss_pred             HHHhCccccCcceeEEEEcCChhhccc
Confidence            999999999999999999999876543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-44  Score=305.20  Aligned_cols=253  Identities=20%  Similarity=0.201  Sum_probs=211.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||++|||+++|++|+++|++|++++|+++.+++..+++....++.++.+|++++++++++++++.+.++++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            69999999999999999999999999999999888877777765445678899999999999999999999999999999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhccc-CCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      ||||........+.+.+.++|.+.+++|+.+++.+++.++|.|.+ +..|+||++||..+..+.++...|+++|+|+.+|
T Consensus        82 ~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~  161 (259)
T PRK08340         82 WNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQL  161 (259)
T ss_pred             ECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHH
Confidence            999986432256778899999999999999999999999998864 4568999999999998889999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhh--hhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  256 (280)
                      +++++.|++++||+||+|+||+++|++.+.........  .............. .+.+++.+|+|||++++||+++.++
T Consensus       162 ~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~p~dva~~~~fL~s~~~~  240 (259)
T PRK08340        162 AKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER-TPLKRTGRWEELGSLIAFLLSENAE  240 (259)
T ss_pred             HHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc-CCccCCCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999875422110000  00000011111222 2458999999999999999999999


Q ss_pred             CeeecEEEeCCcccccc
Q 023613          257 YISGTNLMVDGGFTSVN  273 (280)
Q Consensus       257 ~~~G~~i~~dgG~~~~~  273 (280)
                      ++||+++.+|||+.+.-
T Consensus       241 ~itG~~i~vdgg~~~~~  257 (259)
T PRK08340        241 YMLGSTIVFDGAMTRGV  257 (259)
T ss_pred             cccCceEeecCCcCCCC
Confidence            99999999999987643

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-44  Score=304.65  Aligned_cols=251  Identities=25%  Similarity=0.309  Sum_probs=212.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++.++++|++|||||++|||+++|+.|+++|++|++++| +.+.++...+.+..  ..++.++.+|++++++++++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            445789999999999999999999999999999998865 45555555555432  347889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCC----CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023613           89 VEKFGTLDIMVNNAGISGA----PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  164 (280)
                      .+.++++|++|||||+...    ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+.++
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence            9999999999999987532    114567788999999999999999999999999998877799999999999888899


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      +..|+++|+|+++|++.++.|++++||+|++|+||+++|++.......+.        ......+. .+.+++.+|+|+|
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~--------~~~~~~~~-~~~~r~~~p~~va  232 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEE--------VKAKTEEL-SPLNRMGQPEDLA  232 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHH--------HHHHHHhc-CCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999998654321111        11111222 2348899999999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          245 NAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++++|+++...+++|+.+.+|||+.+
T Consensus       233 ~~~~~l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        233 GACLFLCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             HHHHHHcChhhhcccCcEEEEcCCeec
Confidence            999999999889999999999999764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=5.7e-44  Score=307.78  Aligned_cols=251  Identities=24%  Similarity=0.270  Sum_probs=205.7

Q ss_pred             cccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----------CC----CeEEEecCC--
Q 023613           14 QRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----------EP----DTFFCHCDV--   75 (280)
Q Consensus        14 ~~l~~k~vlItGa--~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----------~~----~~~~~~~D~--   75 (280)
                      .+|+||++|||||  ++|||+++|+.|+++|++|++ +|+.+.++++...+..          ..    ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4589999999999  899999999999999999998 7877777666544421          01    145678898  


Q ss_pred             CC------------------HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHH
Q 023613           76 TK------------------EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH  137 (280)
Q Consensus        76 ~~------------------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  137 (280)
                      ++                  +++++++++++.+.+|++|++|||||.......++.+.+.++|++++++|+.+++.++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            33                  448999999999999999999999986432226788999999999999999999999999


Q ss_pred             HHHhcccCCCceEEEEccccccccCCCC-ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCeeeccccccCCCchhh
Q 023613          138 AARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEER  215 (280)
Q Consensus       138 ~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~T~~~~~~~~~~~~  215 (280)
                      ++|.|.+  .|+||++||..+..+.+++ ..|+++|+|+++|+++|+.|+++ +|||||+|+||+++|++... .+..+.
T Consensus       164 ~~p~m~~--~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~~~~~~  240 (303)
T PLN02730        164 FGPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-IGFIDD  240 (303)
T ss_pred             HHHHHhc--CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-ccccHH
Confidence            9999965  3999999999998888865 48999999999999999999986 79999999999999999765 221110


Q ss_pred             hhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccccccc
Q 023613          216 TEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                             ........ .+.+++.+|+|++++++||+++...+++|+.+.+|||+....--+
T Consensus       241 -------~~~~~~~~-~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g~~~  293 (303)
T PLN02730        241 -------MIEYSYAN-APLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMGLAL  293 (303)
T ss_pred             -------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccccCC
Confidence                   11111112 234788999999999999999999999999999999987655433

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-43  Score=302.19  Aligned_cols=243  Identities=19%  Similarity=0.240  Sum_probs=200.9

Q ss_pred             cCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|++|||||++  |||+++|+.|+++|++|++++|+. ..++..+++.. .....++.||++|+++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6799999999986  999999999999999999999873 33333344432 2345678999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCC---CCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           93 GTLDIMVNNAGISGAPC---PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +++|++|||||+.....   ..+.+.+.++|++.+++|+.+++.+.+.+.|.+.  .+|+||++||..+..+.+++..|+
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchhH
Confidence            99999999999853210   1256788999999999999999999999998664  348999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|+++|+++++.|++++|||||+|+||+++|++.... +...       ......... .+.+++.+|+||+++++|
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~~~-------~~~~~~~~~-~p~~r~~~pedva~~~~~  231 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFR-------KMLAHCEAV-TPIRRTVTIEDVGNSAAF  231 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-CchH-------HHHHHHHHc-CCCcCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999874322 1100       011111222 344899999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCccc
Q 023613          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++...+++|+.+.+|||+.
T Consensus       232 L~s~~~~~itG~~i~vdgg~~  252 (262)
T PRK07984        232 LCSDLSAGISGEVVHVDGGFS  252 (262)
T ss_pred             HcCcccccccCcEEEECCCcc
Confidence            999989999999999999965

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=7.5e-44  Score=302.74  Aligned_cols=246  Identities=33%  Similarity=0.485  Sum_probs=209.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++..          .++.++.||++++++++++++++.+.++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            368899999999999999999999999999999999986532          2577889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.+++..|+++|+
T Consensus        72 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  149 (258)
T PRK06398         72 RIDILVNNAGIESY--GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH  149 (258)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence            99999999998654  7788999999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCch--hhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++++.++.|+.+. |+||+|+||+++|++........  ............+ .. ..+.+++.+|+|+|++++||+
T Consensus       150 al~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~p~eva~~~~~l~  226 (258)
T PRK06398        150 AVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREW-GE-MHPMKRVGKPEEVAYVVAFLA  226 (258)
T ss_pred             HHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhh-hh-cCCcCCCcCHHHHHHHHHHHc
Confidence            9999999999999876 99999999999999875432111  0000000001111 12 234488999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ++...+++|+++.+|||+....|
T Consensus       227 s~~~~~~~G~~i~~dgg~~~~~~  249 (258)
T PRK06398        227 SDLASFITGECVTVDGGLRALIP  249 (258)
T ss_pred             CcccCCCCCcEEEECCccccCCC
Confidence            99999999999999999887643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-43  Score=304.14  Aligned_cols=258  Identities=28%  Similarity=0.381  Sum_probs=219.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..+.+.+.+.. ..++.++.+|+++++++.++++++.+.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999998777777666643 2467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCC-------------CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc
Q 023613           93 GTLDIMVNNAGISGAP-------------CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA  159 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~-------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  159 (280)
                      +++|++|||||...+.             ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+.
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            9999999999975431             134678889999999999999999999999999988778999999999999


Q ss_pred             ccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCC
Q 023613          160 IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       160 ~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                      .+.++...|+++|+|++.++++++.|++++||+||+|+||+++|++.+...........  . ....... ..+.+++.+
T Consensus       166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~--~-~~~~~~~-~~p~~r~~~  241 (278)
T PRK08277        166 TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLT--E-RANKILA-HTPMGRFGK  241 (278)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccch--h-HHHHHhc-cCCccCCCC
Confidence            99999999999999999999999999999999999999999999986543322111000  0 1111122 234589999


Q ss_pred             HHHHHHHHHHhcCC-CCCCeeecEEEeCCcccccccc
Q 023613          240 ANDVANAVLFLASD-EARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       240 ~~dva~~~~~L~s~-~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      |+|+|++++||+++ ...+++|+.+.+|||++..+|+
T Consensus       242 ~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~~~~  278 (278)
T PRK08277        242 PEELLGTLLWLADEKASSFVTGVVLPVDGGFSAYSGV  278 (278)
T ss_pred             HHHHHHHHHHHcCccccCCcCCCEEEECCCeecccCC
Confidence            99999999999999 8999999999999999887764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-43  Score=300.53  Aligned_cols=247  Identities=28%  Similarity=0.425  Sum_probs=217.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++++++++++++.+.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            457899999999999999999999999999999999998887777666643 2467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++++.+.|.+++.++||++||..+..+.+++..|+++|
T Consensus        85 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         85 GPIDVLINNAGIQRR--HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             CCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence            999999999998654  678889999999999999999999999999999777779999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.|++++||++|+|+||+++|++.......+.        +..+..... +.+++.+|+|+|+++++|++
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~--------~~~~~~~~~-p~~~~~~~~~va~~~~~l~~  233 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEA--------FTAWLCKRT-PAARWGDPQELIGAAVFLSS  233 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHH--------HHHHHHhcC-CCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998755322111        222333333 44899999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +.+++++|+++.+|||+..
T Consensus       234 ~~~~~i~G~~i~~dgg~~~  252 (254)
T PRK08085        234 KASDFVNGHLLFVDGGMLV  252 (254)
T ss_pred             ccccCCcCCEEEECCCeee
Confidence            9999999999999999764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-43  Score=300.54  Aligned_cols=246  Identities=24%  Similarity=0.237  Sum_probs=202.8

Q ss_pred             ccccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGa--~~giG~~la~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      |.++++|+++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+.+.  .++.++.+|++++++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP--EPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC--CCCcEEeCCCCCHHHHHHHHHHH
Confidence            45688999999999  89999999999999999999998764  34455544443  25668899999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           89 VEKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      .+.++++|++|||||+....  ..++.+.++++|++.+++|+.+++.++++++|.|.+  .|+||++++.. ..+.+.+.
T Consensus        80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~  156 (256)
T PRK07889         80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYD  156 (256)
T ss_pred             HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccc
Confidence            99999999999999986421  135678899999999999999999999999999963  48999998753 45567788


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCC-CCCCHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG-TELTANDVAN  245 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~  245 (280)
                      .|++||+|+.+|+++++.|++++||+||+|+||+++|++.........        ......... +.+ ++.+|+|+|+
T Consensus       157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~~-p~~~~~~~p~evA~  227 (256)
T PRK07889        157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFEL--------LEEGWDERA-PLGWDVKDPTPVAR  227 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHH--------HHHHHHhcC-ccccccCCHHHHHH
Confidence            899999999999999999999999999999999999998654321110        111111222 335 6899999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++|+++...+++|+++.+|||+...
T Consensus       228 ~v~~l~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        228 AVVALLSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             HHHHHhCcccccccceEEEEcCceecc
Confidence            999999998999999999999998643

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=8.3e-44  Score=295.72  Aligned_cols=227  Identities=25%  Similarity=0.307  Sum_probs=204.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+.+|++||||||+|||+++|+.|+++|++|++++|+++++.++.+++...  ..+.++.+|+++++++.++.+++.++.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            356999999999999999999999999999999999999999999998753  578899999999999999999999988


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ..+|++|||||+...  +++.+.++++.++++++|+.+...++++++|.|.+++.|.||+|+|.++..|.|..+.|++||
T Consensus        83 ~~IdvLVNNAG~g~~--g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          83 GPIDVLVNNAGFGTF--GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             CcccEEEECCCcCCc--cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence            899999999999987  899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++.+|+++|+.|+.++||+|.+|+||++.|+++.. -+....              ...+...+.+|++||+.++..+.
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-~~~~~~--------------~~~~~~~~~~~~~va~~~~~~l~  225 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-KGSDVY--------------LLSPGELVLSPEDVAEAALKALE  225 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-cccccc--------------cccchhhccCHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999862 111110              01112457899999999999997


Q ss_pred             CCCCCe
Q 023613          253 DEARYI  258 (280)
Q Consensus       253 ~~~~~~  258 (280)
                      ...+.+
T Consensus       226 ~~k~~i  231 (265)
T COG0300         226 KGKREI  231 (265)
T ss_pred             cCCceE
Confidence            655443

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-43  Score=297.14  Aligned_cols=249  Identities=38%  Similarity=0.574  Sum_probs=216.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.. ..++.++.+|+++.+++.++++.+.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            458899999999999999999999999999999999998877666655543 3468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||+|..... .++.+.+.++|++.+++|+.+++.++++++|+|.+++.+++|++||..+..+.+++..|+++|
T Consensus        83 g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             CCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence            9999999999986542 457788999999999999999999999999999877779999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++++|++.++.|+.++||+|++|+||+++|++.....+....       ....+.... +.+++.+|+|+++.+++|++
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~p~~ia~~~~~l~~  233 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPR-------KAEFAAAMH-PVGRIGKVEEVASAVLYLCS  233 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChH-------HHHHHhccC-CCCCccCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999997654331111       111222222 34789999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+++.+|||+++
T Consensus       234 ~~~~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        234 DGASFTTGHALMVDGGATA  252 (253)
T ss_pred             ccccCcCCcEEEECCCccC
Confidence            9889999999999999854

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-43  Score=304.82  Aligned_cols=242  Identities=31%  Similarity=0.504  Sum_probs=207.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---------chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---------NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~   84 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++.. ..++.++.+|+++++++.++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            47899999999999999999999999999999998875         556666666543 34677889999999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC------CceEEEEccccc
Q 023613           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAG  158 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~  158 (280)
                      ++.+.+.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.++.      .|+||++||..+
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRD--RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            99999999999999999998754  6788999999999999999999999999999986542      379999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCC--C
Q 023613          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG--T  236 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  236 (280)
                      ..+.+++..|+++|+|+++|+++++.|++++||+||+|+|| ++|++.....+             .+...  ...+  +
T Consensus       161 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~-------------~~~~~--~~~~~~~  224 (286)
T PRK07791        161 LQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA-------------EMMAK--PEEGEFD  224 (286)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH-------------HHHhc--CcccccC
Confidence            99999999999999999999999999999999999999999 78987532211             00000  1112  4


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccccc
Q 023613          237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       237 ~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ..+|+|+|++++||+++...+++|+++.+|||+...-.
T Consensus       225 ~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~  262 (286)
T PRK07791        225 AMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKISVAE  262 (286)
T ss_pred             CCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceEEec
Confidence            57999999999999999999999999999999876543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-43  Score=296.89  Aligned_cols=250  Identities=31%  Similarity=0.453  Sum_probs=219.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+.++++|++|||||+++||+++|++|+++|++|++++|+++..++..+.+.. ..++.++.+|++++++++++++.+.+
T Consensus         4 ~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          4 NLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             cccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34468899999999999999999999999999999999998877776666643 24678899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++++.+.|.+++.++||++||..+..+.+++..|++
T Consensus        84 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~  161 (255)
T PRK07523         84 EIGPIDILVNNAGMQFR--TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTA  161 (255)
T ss_pred             hcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHH
Confidence            99999999999998754  7788899999999999999999999999999998777899999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|++++.+++.++.|++++||+|++|+||+++|++.....+...        ...++.+.. +.+++..|+|+|+++++|
T Consensus       162 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~dva~~~~~l  232 (255)
T PRK07523        162 TKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPE--------FSAWLEKRT-PAGRWGKVEELVGACVFL  232 (255)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHH--------HHHHHHhcC-CCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998654432211        222333333 348899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...+++|+.+.+|||+..+
T Consensus       233 ~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        233 ASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             cCchhcCccCcEEEECCCeecc
Confidence            9998899999999999998654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=8.3e-43  Score=295.50  Aligned_cols=245  Identities=29%  Similarity=0.444  Sum_probs=207.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++||++|||||++|||+++|++|+++|++|++++++..  .+..+.+.. ..++.++.+|+++.+++.++++++.+.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4688999999999999999999999999999998877543  122222221 2467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.+....|+++
T Consensus        84 ~~~D~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (253)
T PRK08993         84 GHIDILVNNAGLIRR--EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS  161 (253)
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence            999999999998654  6688899999999999999999999999999997764 5899999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|++++++.++.|+.++||+||+|+||+++|++.....+....       ...+ ... .+.+++.+|+|+|+.+++|+
T Consensus       162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~-------~~~~-~~~-~p~~r~~~p~eva~~~~~l~  232 (253)
T PRK08993        162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQR-------SAEI-LDR-IPAGRWGLPSDLMGPVVFLA  232 (253)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHH-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986543221110       1111 122 23489999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++..++++|+++.+|||+..
T Consensus       233 s~~~~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        233 SSASDYINGYTIAVDGGWLA  252 (253)
T ss_pred             CccccCccCcEEEECCCEec
Confidence            99999999999999999753

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.6e-43  Score=303.58  Aligned_cols=257  Identities=22%  Similarity=0.262  Sum_probs=201.9

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-----------CCC-----CeEEEec
Q 023613           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-----------GEP-----DTFFCHC   73 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~-----------~~~-----~~~~~~~   73 (280)
                      |+.+++||++||||++  +|||+++|+.|+++|++|++.++.+ .+....+...           ...     ++..+.+
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            5668899999999996  9999999999999999999977541 1111100000           000     0111122


Q ss_pred             CCCCH------------------HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHH
Q 023613           74 DVTKE------------------EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM  135 (280)
Q Consensus        74 D~~~~------------------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  135 (280)
                      |+++.                  ++++++++++.+++|++|++|||||.......++.+.+.++|++.+++|+.+++.++
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            33222                  468999999999999999999999975422267889999999999999999999999


Q ss_pred             HHHHHhcccCCCceEEEEccccccccCCCCc-cchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCeeeccccccCCCch
Q 023613          136 KHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEE  213 (280)
Q Consensus       136 ~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~-~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~T~~~~~~~~~~  213 (280)
                      ++++|+|.+  .|+|++++|..+..+.+++. .|+++|+|+++|+++++.|+++ +|||||+|+||+++|++........
T Consensus       161 ~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~  238 (299)
T PRK06300        161 SHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIE  238 (299)
T ss_pred             HHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccH
Confidence            999999964  48999999999988888765 8999999999999999999987 5999999999999999864321111


Q ss_pred             hhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccccccccccC
Q 023613          214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRVFR  280 (280)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~  280 (280)
                      .        ...+.... .+.++..+|+|++++++||+++...+++|+++.+|||+...+-=.++|+
T Consensus       239 ~--------~~~~~~~~-~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~  296 (299)
T PRK06300        239 R--------MVDYYQDW-APLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMGIGPEMFP  296 (299)
T ss_pred             H--------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceecCCcCccc
Confidence            0        11112222 2347899999999999999999999999999999999998888888875

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-43  Score=296.15  Aligned_cols=248  Identities=33%  Similarity=0.471  Sum_probs=212.6

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ...++++|++|||||++|||+++|++|+++|++|++++|+ +..+++.+.+.. ..++.++.||+++.+++.++++++.+
T Consensus         9 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935          9 DFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999998 444444444322 24678899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||+|....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.+.+..|++
T Consensus        88 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (258)
T PRK06935         88 EFGKIDILVNNAGTIRR--APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTA  165 (258)
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHH
Confidence            99999999999998754  6778889999999999999999999999999998887899999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|++++++++++++|+.++||+||+|+||+++|++..........       .... .+. .+.+++.+|+|+|+.++||
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~-------~~~~-~~~-~~~~~~~~~~dva~~~~~l  236 (258)
T PRK06935        166 SKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNR-------NDEI-LKR-IPAGRWGEPDDLMGAAVFL  236 (258)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHH-------HHHH-Hhc-CCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986543221111       1111 122 2348999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|+++.+|||+..
T Consensus       237 ~s~~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        237 ASRASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             cChhhcCCCCCEEEECCCeec
Confidence            999999999999999999753

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.9e-44  Score=302.30  Aligned_cols=235  Identities=37%  Similarity=0.518  Sum_probs=202.2

Q ss_pred             cCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CCccEEEEC
Q 023613           25 GGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTLDIMVNN  101 (280)
Q Consensus        25 Ga~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d~li~~  101 (280)
                      |++  +|||+++|++|+++|++|++++|+.+.+++..+.+.......++.||++++++++++++++.+.+ +++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            666  99999999999999999999999998755444444322123369999999999999999999999 999999999


Q ss_pred             CCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023613          102 AGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       102 ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      +|....  ...++.+.+.++|++.+++|+.+++.+++++.|+|.+  +|+||++||..+..+.+++..|+++|+|+++|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~  158 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK--GGSIINISSIAAQRPMPGYSAYSASKAALEGLT  158 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence            998754  2367888999999999999999999999999998865  489999999999999999999999999999999


Q ss_pred             HHHHHHHCC-CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCe
Q 023613          180 KNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI  258 (280)
Q Consensus       180 ~~la~e~~~-~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  258 (280)
                      |.+|.||++ +|||||+|+||+++|++.......        ..+.+...+..+ .+++.+|+|||++++||+|+..+++
T Consensus       159 r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~--------~~~~~~~~~~~p-l~r~~~~~evA~~v~fL~s~~a~~i  229 (241)
T PF13561_consen  159 RSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN--------EEFLEELKKRIP-LGRLGTPEEVANAVLFLASDAASYI  229 (241)
T ss_dssp             HHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH--------HHHHHHHHHHST-TSSHBEHHHHHHHHHHHHSGGGTTG
T ss_pred             HHHHHHhccccCeeeeeecccceeccchhccccc--------cchhhhhhhhhc-cCCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999 999999999999999985443221        113334344444 4999999999999999999999999


Q ss_pred             eecEEEeCCccc
Q 023613          259 SGTNLMVDGGFT  270 (280)
Q Consensus       259 ~G~~i~~dgG~~  270 (280)
                      ||++|.+|||++
T Consensus       230 tG~~i~vDGG~s  241 (241)
T PF13561_consen  230 TGQVIPVDGGFS  241 (241)
T ss_dssp             TSEEEEESTTGG
T ss_pred             cCCeEEECCCcC
Confidence            999999999985

...

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-42  Score=292.43  Aligned_cols=247  Identities=31%  Similarity=0.452  Sum_probs=215.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+.+.. ..++.++.+|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999999999998877777666543 2457788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|+|.++..++|+++||..+..+.+++..|++||
T Consensus        84 ~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK07035         84 GRLDILVNNAAANPYF-GHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITK  162 (252)
T ss_pred             CCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHH
Confidence            9999999999975422 567788999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++++++++++.|+.++||+|++|+||+++|++.........        ......+. .+.+++.+|+|+|+++++|++
T Consensus       163 ~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~va~~~~~l~~  233 (252)
T PRK07035        163 AAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDA--------ILKQALAH-IPLRRHAEPSEMAGAVLYLAS  233 (252)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHH--------HHHHHHcc-CCCCCcCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998665433211        11111222 234889999999999999999


Q ss_pred             CCCCCeeecEEEeCCccc
Q 023613          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+++.+|||+.
T Consensus       234 ~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        234 DASSYTTGECLNVDGGYL  251 (252)
T ss_pred             ccccCccCCEEEeCCCcC
Confidence            999999999999999974

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.7e-42  Score=293.91  Aligned_cols=250  Identities=32%  Similarity=0.509  Sum_probs=212.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+..++....+.. ..++.++.+|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999999999998877776666543 24677899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||||+...  .++.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++...|+++|+++
T Consensus        82 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (256)
T PRK08643         82 VVVNNAGVAPT--TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAV  159 (256)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHH
Confidence            99999998654  6788889999999999999999999999999987654 47999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhh--hhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +.+++.++.|+.++||+|++|+||+++|++...........  .........+. +. .+.+++.+|+|+|+++++|+++
T Consensus       160 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~va~~~~~L~~~  237 (256)
T PRK08643        160 RGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFA-KD-ITLGRLSEPEDVANCVSFLAGP  237 (256)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHh-cc-CCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999875432110000  00000011122 22 3458899999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ..++++|+++.+|||+++
T Consensus       238 ~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        238 DSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             cccCccCcEEEeCCCeec
Confidence            999999999999999875

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-42  Score=292.48  Aligned_cols=245  Identities=35%  Similarity=0.529  Sum_probs=204.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++++|+++||||++|||+++|++|+++|++|+++.++.+...+..+.    ..+.++.+|+++++++.++++++.+.++
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999887655432222211    1467889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~~~Y~~sK  172 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+.. +.+++..|+++|
T Consensus        79 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  156 (255)
T PRK06463         79 RVDVLVNNAGIMYL--MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITK  156 (255)
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHH
Confidence            99999999998654  677888999999999999999999999999999877789999999988775 446778999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|+++|+++++.|++++||+|++|+||+++|++.....+.+..     ......... ..+.+++.+|+|+|+++++|++
T Consensus       157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~s  230 (255)
T PRK06463        157 AGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEA-----EKLRELFRN-KTVLKTTGKPEDIANIVLFLAS  230 (255)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccch-----HHHHHHHHh-CCCcCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999987543221110     001112222 2344888999999999999999


Q ss_pred             CCCCCeeecEEEeCCccc
Q 023613          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+++.+|||..
T Consensus       231 ~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        231 DDARYITGQVIVADGGRI  248 (255)
T ss_pred             hhhcCCCCCEEEECCCee
Confidence            988999999999999975

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-42  Score=295.01  Aligned_cols=251  Identities=33%  Similarity=0.440  Sum_probs=206.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.++.+.+.+.  .++.++.+|+++.+++.++++++.+.+++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG--DHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999999999999888777666553  35778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHH----HHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSE----FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|++|||||+.... .++.+.+.++    |++++++|+.+++.+++.++|.|.++ .|+||+++|..+..+.++...|++
T Consensus        81 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~  158 (263)
T PRK06200         81 LDCFVGNAGIWDYN-TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTA  158 (263)
T ss_pred             CCEEEECCCCcccC-CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHH
Confidence            99999999986421 4555666665    89999999999999999999998654 589999999999998888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc-hhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +|+|++.|++.++.|+++. |+||+|+||+++|++....... ..............+... .+.+++.+|+|+|++++|
T Consensus       159 sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~~~eva~~~~f  236 (263)
T PRK06200        159 SKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI-TPLQFAPQPEDHTGPYVL  236 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC-CCCCCCCCHHHHhhhhhh
Confidence            9999999999999999885 9999999999999985432110 000000000011122222 345899999999999999


Q ss_pred             hcCCC-CCCeeecEEEeCCcccc
Q 023613          250 LASDE-ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~-~~~~~G~~i~~dgG~~~  271 (280)
                      |+++. ..+++|+++.+|||+..
T Consensus       237 l~s~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        237 LASRRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             eecccccCcccceEEEEcCceee
Confidence            99988 89999999999999764

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-42  Score=291.77  Aligned_cols=242  Identities=26%  Similarity=0.366  Sum_probs=203.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH--
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK--   91 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~--   91 (280)
                      +++|++|||||++|||+++|++|+++|++|+++. |+.+..++..+++.. ...+..+.+|+++.+++.++++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999998875 555655555555432 245678899999999999999988753  


Q ss_pred             --cC--CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023613           92 --FG--TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        92 --~~--~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  167 (280)
                        ++  ++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|.+  .|+||++||..+..+.++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  157 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIA  157 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchh
Confidence              34  89999999998643  66888999999999999999999999999999964  489999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |++||+|+++++++++.|+.++||+||+|+||+++|++.....+...        ...+... ..+.+++.+|+|+|+++
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~dva~~~  228 (252)
T PRK12747        158 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPM--------MKQYATT-ISAFNRLGEVEDIADTA  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHH--------HHHHHHh-cCcccCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999998654332111        1112122 22347899999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+++...+++|+.+.+|||+.
T Consensus       229 ~~l~s~~~~~~~G~~i~vdgg~~  251 (252)
T PRK12747        229 AFLASPDSRWVTGQLIDVSGGSC  251 (252)
T ss_pred             HHHcCccccCcCCcEEEecCCcc
Confidence            99999988999999999999975

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-42  Score=290.61  Aligned_cols=244  Identities=31%  Similarity=0.478  Sum_probs=211.6

Q ss_pred             cccCCcEEEEEcCCC-hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGAT-GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGa~~-giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..+++|++|||||++ |||+++++.|+++|++|++++|+.+.++...+.+..   ..++.++.+|++++++++++++.+.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            456799999999985 999999999999999999999988777766665532   2367788999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      +.++++|++|||||....  ..+.+.+.++|++.+++|+.+++.+++.++|.|.+.. .++|++++|..+..+.+++..|
T Consensus        93 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  170 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQ--TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHY  170 (262)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcch
Confidence            999999999999998654  6788899999999999999999999999999998765 6899999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|+|++++++.++.|++++||+||+|+||+++|++.....+.+        ....+ .... +.+++.+|+|+|++++
T Consensus       171 ~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~--------~~~~~-~~~~-~~~r~~~p~~va~~~~  240 (262)
T PRK07831        171 AAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAE--------LLDEL-AARE-AFGRAAEPWEVANVIA  240 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHH--------HHHHH-HhcC-CCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999865432211        01112 2222 3488999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcc
Q 023613          249 FLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ||+++...+++|+++.+|+|+
T Consensus       241 ~l~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        241 FLASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             HHcCchhcCcCCceEEeCCCC
Confidence            999999999999999999975

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=6.8e-42  Score=295.89  Aligned_cols=245  Identities=27%  Similarity=0.367  Sum_probs=205.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc--chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.  +..+++.+.+.. ..++.++.+|+++++++.++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999988753  334444443322 246778899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|.|.+  .++||++||..+..+.+++..|+++
T Consensus       126 ~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~as  202 (294)
T PRK07985        126 LGGLDIMALVAGKQVAI-PDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_pred             hCCCCEEEECCCCCcCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHH
Confidence            99999999999975322 56888999999999999999999999999999854  4899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|++++++.++.|++++||+||+|+||+++|++.........       ....+ .. ..+.+++.+|+|+|++++||+
T Consensus       203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~-------~~~~~-~~-~~~~~r~~~pedva~~~~fL~  273 (294)
T PRK07985        203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQD-------KIPQF-GQ-QTPMKRAGQPAELAPVYVYLA  273 (294)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHH-------HHHHH-hc-cCCCCCCCCHHHHHHHHHhhh
Confidence            9999999999999999999999999999999998532111100       01111 12 234488999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||+..
T Consensus       274 s~~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        274 SQESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             ChhcCCccccEEeeCCCeeC
Confidence            99999999999999999753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-42  Score=290.11  Aligned_cols=251  Identities=33%  Similarity=0.469  Sum_probs=212.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+..++..+.+.  .++.++.+|+++++++.++++++.+.+++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG--PAAIAVSLDVTRQDSIDRIVAAAVERFGG   80 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999999988777766654  35778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++++++.|.++. .++||++||..+..+.++...|++||+
T Consensus        81 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  158 (257)
T PRK07067         81 IDILFNNAALFDM--APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKA  158 (257)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHH
Confidence            9999999998754  6788889999999999999999999999999987653 479999999998899999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhh--hhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      +++.+++.++.|+.++||++++|+||+++|+++..........  ..... ..... ....+.+++.+|+|+|+++++|+
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~dva~~~~~l~  236 (257)
T PRK07067        159 AVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGE-KKRLV-GEAVPLGRMGVPDDLTGMALFLA  236 (257)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHH-HHHHH-hhcCCCCCccCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999865321100000  00000 11111 12234589999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+++.+|||...
T Consensus       237 s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        237 SADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             CcccccccCcEEeecCCEeC
Confidence            99889999999999999754

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.2e-41  Score=287.23  Aligned_cols=243  Identities=34%  Similarity=0.489  Sum_probs=207.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+..  .+..+.+.. ..++.++.+|+++.+++.++++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999752  222222221 24678899999999999999999999889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.+....|+++|
T Consensus        80 ~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  157 (248)
T TIGR01832        80 HIDILVNNAGIIRR--ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASK  157 (248)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHH
Confidence            99999999998755  6677889999999999999999999999999997665 68999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++++++++++.|+.++||+|++|+||+++|++.....+....       ...+ .+. .+.+++.+|+|+|+++++|++
T Consensus       158 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~~-~~~-~~~~~~~~~~dva~~~~~l~s  228 (248)
T TIGR01832       158 HGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDR-------NAAI-LER-IPAGRWGTPDDIGGPAVFLAS  228 (248)
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHH-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999986543221111       1111 122 234889999999999999999


Q ss_pred             CCCCCeeecEEEeCCccc
Q 023613          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+++.+|||+.
T Consensus       229 ~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       229 SASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             ccccCcCCcEEEeCCCEe
Confidence            988999999999999975

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.1e-41  Score=289.14  Aligned_cols=248  Identities=30%  Similarity=0.404  Sum_probs=217.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+..   ..++.++.+|+++++++.++++++.+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998877776666532   35788899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||+|....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++
T Consensus        85 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         85 HWDGLHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence            99999999999998654  6678899999999999999999999999999998777799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|++++.+++.++.|+.++||++++|+||+++|++.....+....       ...+ ... .+.+++.+|+|+++++++|
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~-------~~~~-~~~-~~~~~~~~~~~va~~~~~l  233 (257)
T PRK09242        163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDY-------YEQV-IER-TPMRRVGEPEEVAAAVAFL  233 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHH-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999997654433211       1111 122 2347889999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...+++|+.+.+|||...+
T Consensus       234 ~~~~~~~~~g~~i~~~gg~~~~  255 (257)
T PRK09242        234 CMPAASYITGQCIAVDGGFLRY  255 (257)
T ss_pred             hCcccccccCCEEEECCCeEee
Confidence            9988889999999999998764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=290.27  Aligned_cols=256  Identities=30%  Similarity=0.441  Sum_probs=219.8

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++.+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+.+.. ..++.++.||++++++++++++++.
T Consensus         3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            455678999999999999999999999999999999999998877776666543 3478889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|+|.+.+.++||++||..+..+.+++..|+
T Consensus        83 ~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T PRK07097         83 KEVGVIDILVNNAGIIKR--IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYA  160 (265)
T ss_pred             HhCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHH
Confidence            999999999999998765  678889999999999999999999999999999887789999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|++++.+++++++++.++||+|++|+||+++|++............  ...+..+.....+ .+++.+|+|+|+.+++
T Consensus       161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~dva~~~~~  237 (265)
T PRK07097        161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGS--RHPFDQFIIAKTP-AARWGDPEDLAGPAVF  237 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccccc--chhHHHHHHhcCC-ccCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999998654322100000  0112223333333 4789999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++..++++|+.+.+|||+..
T Consensus       238 l~~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        238 LASDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             HhCcccCCCCCCEEEECCCcee
Confidence            9999889999999999999765

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=3.6e-42  Score=293.01  Aligned_cols=250  Identities=31%  Similarity=0.420  Sum_probs=202.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.++++.+..  ..++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH--GDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc--CCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            467999999999999999999999999999999999987766654432  246778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCH----HHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           95 LDIMVNNAGISGAPCPDIREADL----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|++|||||+.... .++.+.+.    ++|++.+++|+.+++.++++++|.|.+. .|++|+++|..+..+.++...|++
T Consensus        80 id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~  157 (262)
T TIGR03325        80 IDCLIPNAGIWDYS-TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTA  157 (262)
T ss_pred             CCEEEECCCCCccC-CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchhHH
Confidence            99999999975321 23333333    5799999999999999999999999765 489999999999998888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc-hhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +|+|+++|++.++.|++++ |+||+|+||+++|++....... ....... ........+. .+.+++.+|+|+|++++|
T Consensus       158 sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~p~~r~~~p~eva~~~~~  234 (262)
T TIGR03325       158 AKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSIST-VPLGDMLKSV-LPIGRMPDAEEYTGAYVF  234 (262)
T ss_pred             HHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccc-cchhhhhhhc-CCCCCCCChHHhhhheee
Confidence            9999999999999999987 9999999999999986432110 0000000 0011222222 345899999999999999


Q ss_pred             hcCCC-CCCeeecEEEeCCcccc
Q 023613          250 LASDE-ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~-~~~~~G~~i~~dgG~~~  271 (280)
                      |+++. ..+++|+++.+|||+..
T Consensus       235 l~s~~~~~~~tG~~i~vdgg~~~  257 (262)
T TIGR03325       235 FATRGDTVPATGAVLNYDGGMGV  257 (262)
T ss_pred             eecCCCcccccceEEEecCCeee
Confidence            99974 57899999999999764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-42  Score=297.61  Aligned_cols=247  Identities=21%  Similarity=0.228  Sum_probs=198.7

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc----------chHHHHHHHhCC-CCCeEEEecCCCCHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----------NLGQQVCQSLGG-EPDTFFCHCDVTKEE   79 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~----------~~~~~~~~~~~~-~~~~~~~~~D~~~~~   79 (280)
                      |++.++++|++|||||++|||+++|++|+++|++|++++|+.          +.++...+.+.. ..++.++.||+++++
T Consensus         1 ~~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          1 PMMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPE   80 (305)
T ss_pred             CCCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            355678999999999999999999999999999999999973          344444444433 245778899999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECC-CCCC--CCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccc
Q 023613           80 DVCSAVDLTVEKFGTLDIMVNNA-GISG--APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~d~li~~a-g~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  156 (280)
                      +++++++++.+.++++|++|||| |...  ....++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||.
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~  160 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence            99999999999999999999999 7531  11256778899999999999999999999999999987767999999997


Q ss_pred             cccc---cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccC
Q 023613          157 AGAI---GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM  233 (280)
Q Consensus       157 ~~~~---~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (280)
                      .+..   +.++...|+++|+|+.+|+++++.|++++|||||+|+||+++|++...........      +..... ..++
T Consensus       161 ~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~------~~~~~~-~~p~  233 (305)
T PRK08303        161 TAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEEN------WRDALA-KEPH  233 (305)
T ss_pred             cccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccc------hhhhhc-cccc
Confidence            6543   23456789999999999999999999999999999999999999854322100000      111111 1232


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCC-CCeeecEEE
Q 023613          234 QGTELTANDVANAVLFLASDEA-RYISGTNLM  264 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~~-~~~~G~~i~  264 (280)
                      .++..+|+|+|++++||+++.. .+++|+++.
T Consensus       234 ~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        234 FAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             cccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            3677899999999999999874 589999876

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-42  Score=290.54  Aligned_cols=250  Identities=24%  Similarity=0.338  Sum_probs=208.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++++|++||||+++|||+++|+.|+++|++|++++|+.+..+...+.+..  ..++.++.+|+++++++.++++.    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            357899999999999999999999999999999999998877776666543  24678889999999999887763    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||+|+...  .++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||+++|..+..+.+.+..|+++
T Consensus        79 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  156 (259)
T PRK06125         79 AGDIDILVNNAGAIPG--GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAG  156 (259)
T ss_pred             hCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHH
Confidence            4799999999998754  77889999999999999999999999999999987777899999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhh-hhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT-EDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      |+|++++++.++.|+.++||+||+|+||+++|++....+...... ......+..+. . ..+.+++.+|+|+|+++++|
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~va~~~~~l  234 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELL-A-GLPLGRPATPEEVADLVAFL  234 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHh-c-cCCcCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999754322111000 00001112221 1 22347889999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|+++.+|||+..
T Consensus       235 ~~~~~~~~~G~~i~vdgg~~~  255 (259)
T PRK06125        235 ASPRSGYTSGTVVTVDGGISA  255 (259)
T ss_pred             cCchhccccCceEEecCCeee
Confidence            999999999999999999764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.6e-42  Score=288.82  Aligned_cols=197  Identities=32%  Similarity=0.446  Sum_probs=180.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CC-CeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EP-DTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +..+.||+|+|||||+|||.++|..|++.|++++++.|..++++.+.+++..  .. ++.+++||++|.+++.++++++.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999988888887666532  13 59999999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ..+|++|+||||||+...  ....+.+.+++...|++|++|.+.++++++|.|++++.|+||+|||.+|+.+.|....|+
T Consensus        87 ~~fg~vDvLVNNAG~~~~--~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~  164 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLV--GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYS  164 (282)
T ss_pred             HhcCCCCEEEecCccccc--cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccc
Confidence            999999999999999874  788899999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCC--eEEEEEeCCeeeccccccCCCc
Q 023613          170 GSKHAVLGLNKNVAAELGKYG--IRVNCVSPYAVATGLALAHLPE  212 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~g--i~v~~v~pg~v~T~~~~~~~~~  212 (280)
                      +||+|+.+|+++|+.|+.+.+  |++ .|+||+|+|++....+..
T Consensus       165 ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~  208 (282)
T KOG1205|consen  165 ASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLG  208 (282)
T ss_pred             hHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhcc
Confidence            999999999999999999977  666 999999999987665543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.7e-41  Score=286.51  Aligned_cols=243  Identities=32%  Similarity=0.514  Sum_probs=210.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+.. ..++.++.+|+++.+++.++++.+.+.++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47799999999999999999999999999999999998877776665542 34678889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .++ +.+.++|++.+++|+.+++.++++++|+|.+.+.++||++||..+..+.+++..|+++|+
T Consensus        88 ~~d~li~~ag~~~~--~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  164 (255)
T PRK06113         88 KVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA  164 (255)
T ss_pred             CCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHH
Confidence            99999999998654  344 688999999999999999999999999997777789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      |++++++.++.++..+||+||+|+||+++|++.....+..         ......+. .+.+++.+|+|+++++++|+++
T Consensus       165 a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~d~a~~~~~l~~~  234 (255)
T PRK06113        165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE---------IEQKMLQH-TPIRRLGQPQDIANAALFLCSP  234 (255)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHH---------HHHHHHhc-CCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999876533211         11111222 2347889999999999999999


Q ss_pred             CCCCeeecEEEeCCccc
Q 023613          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+++.+|||..
T Consensus       235 ~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        235 AASWVSGQILTVSGGGV  251 (255)
T ss_pred             cccCccCCEEEECCCcc
Confidence            89999999999999954

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-41  Score=316.77  Aligned_cols=250  Identities=34%  Similarity=0.493  Sum_probs=215.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+.+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+.  .++..+.+|++|+++++++++++.+.+++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG--DEHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999999888877766654  35667899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||..... .++.+.+.++|++++++|+.+++.+++.++|+|  ++.|+||++||..+..+.+++..|+++|++
T Consensus       344 id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  420 (520)
T PRK06484        344 LDVLVNNAGIAEVF-KPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAA  420 (520)
T ss_pred             CCEEEECCCCcCCC-CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHH
Confidence            99999999986432 567889999999999999999999999999999  345899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++|++.++.|++++||+||+|+||+++|++..........      ....+ .+.. +.+++.+|+|+|+++++|+++.
T Consensus       421 l~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~------~~~~~-~~~~-~~~~~~~~~dia~~~~~l~s~~  492 (520)
T PRK06484        421 VTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRA------DFDSI-RRRI-PLGRLGDPEEVAEAIAFLASPA  492 (520)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHH------HHHHH-HhcC-CCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999986543221110      01111 2222 3478899999999999999998


Q ss_pred             CCCeeecEEEeCCcccccccccc
Q 023613          255 ARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      ..+++|+++.+|||+......-+
T Consensus       493 ~~~~~G~~i~vdgg~~~~~~~~~  515 (520)
T PRK06484        493 ASYVNGATLTVDGGWTAFGDAGD  515 (520)
T ss_pred             ccCccCcEEEECCCccCCCCCcc
Confidence            89999999999999876655443

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-41  Score=287.92  Aligned_cols=239  Identities=26%  Similarity=0.328  Sum_probs=204.6

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecC-----------cchHHHHHHHhCC-CCCeEEEecCCCCHHH
Q 023613           15 RLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQ-----------DNLGQQVCQSLGG-EPDTFFCHCDVTKEED   80 (280)
Q Consensus        15 ~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~-----------~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   80 (280)
                      .|+||++|||||+  +|||+++|++|+++|++|++++|+           .+...+..+.+.. ..++.++.+|+++.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            5889999999998  599999999999999999987542           1222233333332 3577888999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc
Q 023613           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI  160 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  160 (280)
                      +.++++++.+.++++|++|||||....  .++.+.+.++|++.+++|+.+++.+.++++|.|.++..|+||++||..+..
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  160 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTN--NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence            999999999999999999999998654  678899999999999999999999999999999877789999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.+++..|+++|++++.|+++++.++.++||+|++|+||+++|++....             ....+... .+.+++.+|
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~-------------~~~~~~~~-~~~~~~~~~  226 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE-------------IKQGLLPM-FPFGRIGEP  226 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH-------------HHHHHHhc-CCCCCCcCH
Confidence            9999999999999999999999999999999999999999999863211             11111111 234788899


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      +|+|+++++|+++..++++|+++.+|||+
T Consensus       227 ~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        227 KDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence            99999999999998899999999999995

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-41  Score=288.11  Aligned_cols=253  Identities=32%  Similarity=0.474  Sum_probs=209.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.. +..+.+. ...++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIE-KLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH-HHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999987533 3333332 23467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc-cccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++++|.+...++||++||..+ ..+.+++..|+++
T Consensus        81 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~s  158 (263)
T PRK08226         81 GRIDILVNNAGVCRL--GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALT  158 (263)
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHH
Confidence            999999999998654  6788889999999999999999999999999987777789999999887 4566788999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++++++.++.+++++||+|++|+||+++|++......... .... ........+.. +.+++.+|+|+|+.+++|+
T Consensus       159 K~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~-~~~~-~~~~~~~~~~~-p~~~~~~~~~va~~~~~l~  235 (263)
T PRK08226        159 KAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSN-PEDP-ESVLTEMAKAI-PLRRLADPLEVGELAAFLA  235 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhcc-CCCc-HHHHHHHhccC-CCCCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999998754321100 0000 00111122222 3478899999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++...+++|+++.+|||+.+.
T Consensus       236 ~~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        236 SDESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             CchhcCCcCceEeECCCcccC
Confidence            998999999999999998753

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-41  Score=285.66  Aligned_cols=243  Identities=36%  Similarity=0.544  Sum_probs=210.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++.+|++|||||+++||+++|++|+++|++|++++|+.+... ..+.+. ..++.++.+|+++++++.++++++.+.++
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAAQLL-GGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhh-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4688999999999999999999999999999999999876433 233332 24566889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+.+..|+++|+
T Consensus        89 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         89 RIDILVNSAGVALL--APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence            99999999998754  6778889999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++++++.++.|++++||++++|+||+++|++.........        ...+ .+. .+.+++.+|+|+|+++++|+++
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--------~~~~-~~~-~~~~~~~~~~~va~~~~~l~~~  236 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEK--------GERA-KKL-IPAGRFAYPEEIAAAALFLASD  236 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhH--------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999999999999999998654332110        0111 122 2348899999999999999999


Q ss_pred             CCCCeeecEEEeCCccc
Q 023613          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+++.+|||+.
T Consensus       237 ~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        237 AAAMITGENLVIDGGYT  253 (255)
T ss_pred             cccCccCCEEEECCCcc
Confidence            99999999999999975

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3e-41  Score=287.13  Aligned_cols=248  Identities=33%  Similarity=0.483  Sum_probs=212.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++|++|||||++|||+++|++|+++|++|+++.|+. +..+...+.+.. ..++.++.+|+++.+++.++++.+.+.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999988854 444444444432 346778999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++++|.+.+ .|+||++||..+..+.+++..|++
T Consensus        83 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  160 (261)
T PRK08936         83 FGTLDVMINNAGIENA--VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA  160 (261)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence            9999999999998755  6788899999999999999999999999999997764 589999999999889999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|++.+++.++.++.++||+|++|+||+++|++....++....       ... ... ..+.+++.+|+|+++.+++|
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~-~~~-~~~~~~~~~~~~va~~~~~l  231 (261)
T PRK08936        161 SKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQ-------RAD-VES-MIPMGYIGKPEEIAAVAAWL  231 (261)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHH-------HHH-HHh-cCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986654332111       111 112 22348899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++..++++|+++.+|||+...
T Consensus       232 ~s~~~~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        232 ASSEASYVTGITLFADGGMTLY  253 (261)
T ss_pred             cCcccCCccCcEEEECCCcccC
Confidence            9999999999999999997743

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.2e-41  Score=292.68  Aligned_cols=246  Identities=28%  Similarity=0.375  Sum_probs=207.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc--hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN--LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..+++|++|||||++|||+++|++|+++|++|++++++.+  ..++..+.+.. ..++.++.||+++.++++++++++.+
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999887543  33344444432 24677899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|.|.+  .++||++||..+..+.+++..|++
T Consensus       131 ~~g~iD~lV~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~a  207 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAV-KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAS  207 (300)
T ss_pred             HhCCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHH
Confidence            999999999999986432 56888999999999999999999999999999854  479999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|++.|++.++.++.++||+||+|+||+++|++.........       .... +... .+.+++..|+|+|.++++|
T Consensus       208 sK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~-------~~~~-~~~~-~p~~r~~~p~dva~~~~~l  278 (300)
T PRK06128        208 TKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPE-------KIPD-FGSE-TPMKRPGQPVEMAPLYVLL  278 (300)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHH-------HHHH-HhcC-CCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998643211110       0111 1122 3448899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|+.+.+|||+..
T Consensus       279 ~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        279 ASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             hCccccCccCcEEeeCCCEeC
Confidence            999889999999999999753

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-41  Score=285.90  Aligned_cols=252  Identities=27%  Similarity=0.373  Sum_probs=203.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+++|++|||||++|||+++|++|+++|++|++++|++. .....+.+.. ..++.++.+|+++.+++.++++++.+.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3478999999999999999999999999999999999853 3344444432 3467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||.... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+.  .++...|+++|
T Consensus        83 ~~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y~~sK  159 (260)
T PRK12823         83 GRIDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPYSAAK  159 (260)
T ss_pred             CCCeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCccHHHH
Confidence            999999999996532 267888999999999999999999999999999987777899999998764  23567899999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCC---CchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL---PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +|++.|++.++.|++++||+|++|+||+++|++.....   +...........+...... ..+.+++.+|+|+|+++++
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~  238 (260)
T PRK12823        160 GGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLD-SSLMKRYGTIDEQVAAILF  238 (260)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhc-cCCcccCCCHHHHHHHHHH
Confidence            99999999999999999999999999999998632110   0000000000011111112 2344888999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCccc
Q 023613          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++...+++|+.+.+|||..
T Consensus       239 l~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        239 LASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             HcCcccccccCcEEeecCCCC
Confidence            999988999999999999974

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-41  Score=284.96  Aligned_cols=248  Identities=29%  Similarity=0.404  Sum_probs=216.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++|+++||||+++||++++++|+++|++|++++|+++.++...+++.. ..++.++.||+++++++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3458899999999999999999999999999999999998877776666543 246888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+++++.|.+++.+++|++||..+..+.+++..|+++
T Consensus        86 ~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (256)
T PRK06124         86 HGRLDILVNNVGARDR--RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAA  163 (256)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHH
Confidence            9999999999998654  67888999999999999999999999999999987778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++++++.++.|+.++||++++|+||+++|++.......+.        ...++.+. .+.+++.+|+|+++++++|+
T Consensus       164 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~a~~~~~l~  234 (256)
T PRK06124        164 KQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPA--------VGPWLAQR-TPLGRWGRPEEIAGAAVFLA  234 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChH--------HHHHHHhc-CCCCCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999998544322111        11222222 23488999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||+..
T Consensus       235 ~~~~~~~~G~~i~~dgg~~~  254 (256)
T PRK06124        235 SPAASYVNGHVLAVDGGYSV  254 (256)
T ss_pred             CcccCCcCCCEEEECCCccc
Confidence            99999999999999999764

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-41  Score=284.56  Aligned_cols=239  Identities=36%  Similarity=0.443  Sum_probs=206.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.     ..  ....+.++.+|+++++++.++++.+.+.+++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TV--DGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hh--cCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999998754     11  1246778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.+.+.|.++ ..++||++||..+..+.+++..|+++|+
T Consensus        76 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  153 (252)
T PRK07856         76 LDVLVNNAGGSPY--ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKA  153 (252)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHH
Confidence            9999999998754  677888999999999999999999999999998764 4589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.|++.++.|+.++ |++++|+||+++|++.....+....       ... ..+. .+.+++.+|+|+|+++++|+++
T Consensus       154 a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~-------~~~-~~~~-~~~~~~~~p~~va~~~~~L~~~  223 (252)
T PRK07856        154 GLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEG-------IAA-VAAT-VPLGRLATPADIAWACLFLASD  223 (252)
T ss_pred             HHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHH-------HHH-Hhhc-CCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999988 9999999999999986543322110       111 1222 2348899999999999999999


Q ss_pred             CCCCeeecEEEeCCccccc
Q 023613          254 EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~  272 (280)
                      ...+++|+.+.+|||..+.
T Consensus       224 ~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        224 LASYVSGANLEVHGGGERP  242 (252)
T ss_pred             ccCCccCCEEEECCCcchH
Confidence            8899999999999998763

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-41  Score=285.07  Aligned_cols=250  Identities=28%  Similarity=0.363  Sum_probs=206.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+..      .  ..++.++.+|++++++++++++++.+.++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L--PEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c--CCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            468899999999999999999999999999999999986531      1  23577899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-~~~~Y~~sK  172 (280)
                      ++|++|||||........+.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.+ ++..|+++|
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK  156 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAK  156 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHH
Confidence            9999999999764333567788999999999999999999999999999887778999999999888755 788999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh--hhhhhhhHHHHHh-hhccCCCCCCCHHHHHHHHHH
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVA-RNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +++++|++.++.+++++||++++|+||+++|++.....+....  .....+....... ....+.+++.+|+|+|+++++
T Consensus       157 ~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~  236 (260)
T PRK06523        157 AALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAF  236 (260)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999986432211000  0000000111111 011244889999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+.+.+|||...
T Consensus       237 l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        237 LASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HhCcccccccCceEEecCCccC
Confidence            9999889999999999999754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-41  Score=288.50  Aligned_cols=250  Identities=34%  Similarity=0.472  Sum_probs=205.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+...        ..++.++.+|++++++++++++++.+.++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999999999876432        13577889999999999999999999999


Q ss_pred             CccEEEECCCCCCCC-------CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           94 TLDIMVNNAGISGAP-------CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        94 ~~d~li~~ag~~~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      ++|++|||||.....       ..++.+.+.++|++.+++|+.+++.+++++.++|.+++.++||++||..+..+.++..
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  156 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQS  156 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCc
Confidence            999999999975431       0124568899999999999999999999999999887789999999999999989999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeee-ccccccCCCchhh---hhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEER---TEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~-T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      .|+++|+++++|++.++.|++++||+||+|+||+++ |++.....+....   ..........+.+....+.+++.+|+|
T Consensus       157 ~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~e  236 (266)
T PRK06171        157 CYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSE  236 (266)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHH
Confidence            999999999999999999999999999999999997 6653321111000   000001111121111334589999999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ||++++||+++..++++|+++.+|||+.+
T Consensus       237 va~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        237 VADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             hhhheeeeeccccccceeeEEEecCcccC
Confidence            99999999999999999999999999875

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-40  Score=281.07  Aligned_cols=244  Identities=28%  Similarity=0.408  Sum_probs=206.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ||++|||||++|||+++++.|+++|++|++++|+.+.++...+.+.. ..++.++.+|++++++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            68999999999999999999999999999999998777776665542 24688899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||+|....  .++.+.+.++|++.+++|+.+++.++++++++|.+. ..|+||++||..+..+.+++..|+++|+|+
T Consensus        81 ~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~  158 (252)
T PRK07677         81 ALINNAAGNFI--CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV  158 (252)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHH
Confidence            99999997543  677889999999999999999999999999998654 358999999999988888899999999999


Q ss_pred             HHHHHHHHHHHCC-CCeEEEEEeCCeeecccc-ccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          176 LGLNKNVAAELGK-YGIRVNCVSPYAVATGLA-LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       176 ~~~~~~la~e~~~-~gi~v~~v~pg~v~T~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      ++|++.++.|+.+ +||++++|+||+++|+.. ......+.        ......+.. +.+++.+|+|+++++.+|+++
T Consensus       159 ~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~va~~~~~l~~~  229 (252)
T PRK07677        159 LAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEE--------AAKRTIQSV-PLGRLGTPEEIAGLAYFLLSD  229 (252)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHH--------HHHHHhccC-CCCCCCCHHHHHHHHHHHcCc
Confidence            9999999999975 799999999999996432 21111111        111112222 347899999999999999998


Q ss_pred             CCCCeeecEEEeCCccccc
Q 023613          254 EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~  272 (280)
                      ...+++|+++.+|||....
T Consensus       230 ~~~~~~g~~~~~~gg~~~~  248 (252)
T PRK07677        230 EAAYINGTCITMDGGQWLN  248 (252)
T ss_pred             cccccCCCEEEECCCeecC
Confidence            8889999999999997654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.6e-40  Score=281.05  Aligned_cols=249  Identities=29%  Similarity=0.379  Sum_probs=210.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..++++|++|||||+++||++++++|+++|++|++++|+.  .    ..  ...++.++.+|+++++++.++++++.+++
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--L----TQ--EDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--h----hh--cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3568899999999999999999999999999999999986  1    11  12467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||+|....  .++.+.+.+++++.+++|+.+++.+++++++.|.+++.++||++||..+..+.++...|+++|
T Consensus        75 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  152 (252)
T PRK08220         75 GPLDVLVNAAGILRM--GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASK  152 (252)
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHH
Confidence            999999999998765  678888999999999999999999999999999887789999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.|++++||+|+++.||+++|++........................ ..+.+++.+|+|+|+++++|++
T Consensus       153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~~  231 (252)
T PRK08220        153 AALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKL-GIPLGKIARPQEIANAVLFLAS  231 (252)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhh-cCCCcccCCHHHHHHHHHHHhc
Confidence            999999999999999999999999999999998654432221111111111111122 2334789999999999999999


Q ss_pred             CCCCCeeecEEEeCCccccc
Q 023613          253 DEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +...+++|+++.+|||..+.
T Consensus       232 ~~~~~~~g~~i~~~gg~~~~  251 (252)
T PRK08220        232 DLASHITLQDIVVDGGATLG  251 (252)
T ss_pred             chhcCccCcEEEECCCeecC
Confidence            98899999999999998763

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=2e-40  Score=281.35  Aligned_cols=246  Identities=30%  Similarity=0.441  Sum_probs=209.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+|++|||||++|||++++++|+++|++|+++.+ +.+..+...+.+.. ..++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3789999999999999999999999999988865 44555555555433 357888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||+|....  ..+.+.+.++|++.+++|+.+++.+++++.++|.+++ .|+||++||..+..+.++...|+++|+
T Consensus        81 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  158 (256)
T PRK12743         81 IDVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKH  158 (256)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHH
Confidence            9999999998754  6678889999999999999999999999999996653 589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.+++.++.++.++||++++|+||+++|++.....+.          ...... ...+.++..+|+|+++++++|+++
T Consensus       159 a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~----------~~~~~~-~~~~~~~~~~~~dva~~~~~l~~~  227 (256)
T PRK12743        159 ALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSD----------VKPDSR-PGIPLGRPGDTHEIASLVAWLCSE  227 (256)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChH----------HHHHHH-hcCCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999986432111          000111 122347888999999999999999


Q ss_pred             CCCCeeecEEEeCCcccccccc
Q 023613          254 EARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      ...+++|+++.+|||...++|-
T Consensus       228 ~~~~~~G~~~~~dgg~~~~~~~  249 (256)
T PRK12743        228 GASYTTGQSLIVDGGFMLANPQ  249 (256)
T ss_pred             cccCcCCcEEEECCCccccCCc
Confidence            8899999999999998876643

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-40  Score=279.54  Aligned_cols=245  Identities=33%  Similarity=0.453  Sum_probs=204.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++|++|||||++|||+++|+.|+++|++|+++.+ +.+..+.+...+.  .++.++.+|+++++++.++++++.+.++
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG--DRAIALQADVTDREQVQAMFATATEHFG   79 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            367899999999999999999999999999988655 4555554444443  4678899999999999999999998888


Q ss_pred             C-ccEEEECCCCCCC----CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           94 T-LDIMVNNAGISGA----PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        94 ~-~d~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      + +|++|||||....    ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++|++++|.....+..++..|
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  159 (253)
T PRK08642         80 KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDY  159 (253)
T ss_pred             CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccch
Confidence            7 9999999987421    1145778899999999999999999999999999977777999999998877777778899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|++++++++.+++++.++||+||+|+||+++|+......+..         ........ .+.+++.+|+|+|++++
T Consensus       160 ~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~va~~~~  229 (253)
T PRK08642        160 TTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDE---------VFDLIAAT-TPLRKVTTPQEFADAVL  229 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHH---------HHHHHHhc-CCcCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999998644322111         11111222 23488999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+++...+++|+.+.+|||+..
T Consensus       230 ~l~~~~~~~~~G~~~~vdgg~~~  252 (253)
T PRK08642        230 FFASPWARAVTGQNLVVDGGLVM  252 (253)
T ss_pred             HHcCchhcCccCCEEEeCCCeec
Confidence            99999889999999999999753

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-40  Score=277.52  Aligned_cols=248  Identities=30%  Similarity=0.456  Sum_probs=216.2

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |+.++++|+++||||+++||+++++.|+++|++|++++|+++..+...+.+.. ..++.++.+|++++++++++++++.+
T Consensus         1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998877776666543 24688899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||+|....  ..+.+.+.+++++.+++|+.+++.+++.+.++|.+++.|++|++||..+..+.+....|++
T Consensus        81 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  158 (250)
T PRK12939         81 ALGGLDGLVNNAGITNS--KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVA  158 (250)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHH
Confidence            99999999999998765  6778889999999999999999999999999998877899999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|++++.+++.++.++..++|++++|+||+++|++.....+..         +....... .+.+++.+|+|+|++++++
T Consensus       159 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l  228 (250)
T PRK12939        159 SKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADE---------RHAYYLKG-RALERLQVPDDVAGAVLFL  228 (250)
T ss_pred             HHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChH---------HHHHHHhc-CCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999875533211         11111122 2347889999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++..++++|+.|.+|||+++
T Consensus       229 ~~~~~~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        229 LSDAARFVTGQLLPVNGGFVM  249 (250)
T ss_pred             hCccccCccCcEEEECCCccc
Confidence            998888999999999999876

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.6e-42  Score=262.51  Aligned_cols=242  Identities=27%  Similarity=0.357  Sum_probs=209.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+|.|+.+++||+..|||++++++|++.|++|+.+.|+++.+..+.++.-  ..+..+..|+++.+.+.+++..+    
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p--~~I~Pi~~Dls~wea~~~~l~~v----   75 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP--SLIIPIVGDLSAWEALFKLLVPV----   75 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC--cceeeeEecccHHHHHHHhhccc----
Confidence            346889999999999999999999999999999999999998888776544  34778899999977766655543    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +.+|.++||||+...  .++.+.+.++++++|.+|+.+.+.+.|...+-+..+ ..|.||++||.++..+..+-..||++
T Consensus        76 ~pidgLVNNAgvA~~--~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcat  153 (245)
T KOG1207|consen   76 FPIDGLVNNAGVATN--HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCAT  153 (245)
T ss_pred             Cchhhhhccchhhhc--chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeec
Confidence            689999999999877  899999999999999999999999999966554444 35889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++++|+||.|+.+++||||+|.|-.+.|+|-+..-........       .  -...+++++..++||.++++||+
T Consensus       154 KaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~-------m--L~riPl~rFaEV~eVVnA~lfLL  224 (245)
T KOG1207|consen  154 KAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKK-------M--LDRIPLKRFAEVDEVVNAVLFLL  224 (245)
T ss_pred             HHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccc-------h--hhhCchhhhhHHHHHHhhheeee
Confidence            99999999999999999999999999999999998766544322211       1  12345699999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+.+...+|+.+-++||++.
T Consensus       225 Sd~ssmttGstlpveGGfs~  244 (245)
T KOG1207|consen  225 SDNSSMTTGSTLPVEGGFSN  244 (245)
T ss_pred             ecCcCcccCceeeecCCccC
Confidence            99999999999999999984

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=8.9e-40  Score=277.18  Aligned_cols=244  Identities=31%  Similarity=0.466  Sum_probs=207.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++||++|||||+++||+++|++|+++|++|++++|+.+...+..+.+.  .++.++.+|+++.+++.++++++.++++
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG--ENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC--CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999999999999998776666555443  4677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||.......++.+.+.++|++.+++|+.+++.+++++.|.|.+. .++||++||..+..+.+++..|+++|+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKa  162 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKG  162 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHH
Confidence            9999999999875433567788999999999999999999999999998654 489999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.+++.++.++.. +|+|++++||+++|++....... .        ...... ...+.+++.+|+|+|+++++|+++
T Consensus       163 a~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~-~--------~~~~~~-~~~~~~~~~~~~~va~~~~~l~~~  231 (255)
T PRK05717        163 GLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAE-P--------LSEADH-AQHPAGRVGTVEDVAAMVAWLLSR  231 (255)
T ss_pred             HHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccch-H--------HHHHHh-hcCCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999986 49999999999999974332111 0        111111 123448899999999999999998


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||..+
T Consensus       232 ~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        232 QAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             hhcCccCcEEEECCCceE
Confidence            888999999999999764

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-40  Score=278.92  Aligned_cols=253  Identities=27%  Similarity=0.414  Sum_probs=208.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++.. +..+.+.. ..++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999999999988766 44444432 3568889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||....  ..+...+ ++|++.+++|+.+++.+.+.++|.|.+. .++|+++||..+..+.+++..|+++|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (258)
T PRK08628         82 GRIDGLVNNAGVNDG--VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAK  157 (258)
T ss_pred             CCCCEEEECCcccCC--CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHH
Confidence            999999999997643  4455444 9999999999999999999999988654 58999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++++++.++.|+.++||++++|+||.++|++............   ..... ..+..+...++++|+|+|++++++++
T Consensus       158 ~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~~  233 (258)
T PRK08628        158 GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPE---AKLAA-ITAKIPLGHRMTTAEEIADTAVFLLS  233 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHH---HHHHH-HHhcCCccccCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998654221110000   00111 11222222478999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccccccc
Q 023613          253 DEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +...+++|+.+.+|||++..+-.
T Consensus       234 ~~~~~~~g~~~~~~gg~~~~~~~  256 (258)
T PRK08628        234 ERSSHTTGQWLFVDGGYVHLDRA  256 (258)
T ss_pred             hhhccccCceEEecCCccccccc
Confidence            98889999999999999876543

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-40  Score=278.65  Aligned_cols=246  Identities=30%  Similarity=0.436  Sum_probs=212.8

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +..++++|+++||||+++||++++++|+++|++|++++|+.+.++.+...+.. ..++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          3 RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            44568899999999999999999999999999999999998887776665532 34678899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--------CceEEEEccccccccC
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--------KGTIISICSVAGAIGG  162 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~~~iv~isS~~~~~~~  162 (280)
                      .++++|++|||+|....  .++.+.+.++|+.++++|+.+++.+++++++.|.++.        .+++|+++|..+..+.
T Consensus        83 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  160 (258)
T PRK06949         83 EAGTIDILVNNSGVSTT--QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL  160 (258)
T ss_pred             hcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC
Confidence            99999999999998654  6677888999999999999999999999999886553        4799999999998888


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      +....|+++|++++.+++.++.++.++||++++|+||+++|++.........         ...+.+.. +.+++..|+|
T Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---------~~~~~~~~-~~~~~~~p~~  230 (258)
T PRK06949        161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQ---------GQKLVSML-PRKRVGKPED  230 (258)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHH---------HHHHHhcC-CCCCCcCHHH
Confidence            8899999999999999999999999999999999999999998664332110         11122222 3378999999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      +++.+.||+++.+++++|+++.+|||+
T Consensus       231 ~~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        231 LDGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             HHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence            999999999999999999999999997

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.2e-40  Score=275.80  Aligned_cols=243  Identities=26%  Similarity=0.402  Sum_probs=207.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++|++|||||++|||+++|++|+++|++|++. .++.+...+..+.+.. ..++..+.+|+++.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999998874 4444444444444432 34677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++++.|.+++.++||++||..+..+.+++..|+++|+
T Consensus        81 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~  158 (246)
T PRK12938         81 EIDVLVNNAGITRD--VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHH
Confidence            99999999998754  6788899999999999999999999999999998777789999999999989899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.+++.++.++..+||++++|+||+++|++.....+.          ......+. .+..++.+++|+++++++|+++
T Consensus       159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~v~~~~~~l~~~  227 (246)
T PRK12938        159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD----------VLEKIVAT-IPVRRLGSPDEIGSIVAWLASE  227 (246)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChH----------HHHHHHhc-CCccCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999986543221          11111122 2336789999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||+.+
T Consensus       228 ~~~~~~g~~~~~~~g~~~  245 (246)
T PRK12938        228 ESGFSTGADFSLNGGLHM  245 (246)
T ss_pred             ccCCccCcEEEECCcccC
Confidence            889999999999999754

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-40  Score=281.22  Aligned_cols=233  Identities=26%  Similarity=0.366  Sum_probs=192.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +|++||||+ +|||+++|++|+ +|++|++++|+.+.+++..+++.. ..++.++.||++|++++.++++++ +.++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            789999998 699999999996 899999999998777766666543 246788999999999999999988 5678999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC--------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------------  162 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--------------  162 (280)
                      ++|||||+..         ..++|++.+++|+.+++.+++.++|.|.+  ++++|+++|..+..+.              
T Consensus        79 ~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         79 GLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             EEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccccccc
Confidence            9999999752         13579999999999999999999999954  4788999998876542              


Q ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHH
Q 023613          163 ----------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF  226 (280)
Q Consensus       163 ----------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~  226 (280)
                                      +++..|++||+|++.+++.++.|++++||+||+|+||+++|++....+.....     ......
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~-----~~~~~~  222 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRG-----DGYRNM  222 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCch-----HHHHHH
Confidence                            24678999999999999999999999999999999999999986543221110     001111


Q ss_pred             HhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       227 ~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                       ... .+.+++.+|+|+|++++||+++..++++|+.+.+|||...
T Consensus       223 -~~~-~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        223 -FAK-SPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             -hhh-CCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence             122 2448999999999999999999999999999999999764

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-40  Score=278.68  Aligned_cols=252  Identities=28%  Similarity=0.346  Sum_probs=210.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +++|++|||||++|||+++|++|+++|++|++++|+++..++..+.+.. ..++.++.+|++++++++++++++.+.+++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            6789999999999999999999999999999999998877777666643 246788999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||..... .++.+.+.++|++.+++|+.+++.+++++.+.|.+. .++||++||..+..+.+++..|+++|++
T Consensus        83 ~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  160 (258)
T PRK07890         83 VDALVNNAFRVPSM-KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAKGA  160 (258)
T ss_pred             ccEEEECCccCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHHHH
Confidence            99999999986432 567788999999999999999999999999998654 4799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhh--hhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++.+++.++.+++.+||++++++||++.|++............  ........+ .+. .+.+++.+|+|+++++++|++
T Consensus       161 ~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~dva~a~~~l~~  238 (258)
T PRK07890        161 LLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAET-AAN-SDLKRLPTDDEVASAVLFLAS  238 (258)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHH-hhc-CCccccCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999997543222110000  000001111 112 234788999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+++.+|||..+
T Consensus       239 ~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        239 DLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             HhhhCccCcEEEeCCcccc
Confidence            8778999999999999754

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=278.18  Aligned_cols=252  Identities=28%  Similarity=0.373  Sum_probs=212.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+.++...+.+.. ..++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999998776665554432 245678899999999999999999998


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.++ .|+|+++||..+..+.+++..|+++
T Consensus        84 ~~~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~as  160 (264)
T PRK07576         84 FGPIDVLVSGAAGNFP--APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAA  160 (264)
T ss_pred             cCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHH
Confidence            9999999999997654  677889999999999999999999999999998654 4899999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeee-ccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      |+++++|+++++.|+..+||++++|+||+++ |+......+...        ......+. .+.+++.+|+|+|+.+++|
T Consensus       161 K~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~~~~l  231 (264)
T PRK07576        161 KAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPE--------LQAAVAQS-VPLKRNGTKQDIANAALFL  231 (264)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHH--------HHHHHHhc-CCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999997 554333222211        11111222 3347889999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      +++...+++|+.+.+|||+.....+.
T Consensus       232 ~~~~~~~~~G~~~~~~gg~~~~~~~~  257 (264)
T PRK07576        232 ASDMASYITGVVLPVDGGWSLGGASI  257 (264)
T ss_pred             cChhhcCccCCEEEECCCcccCchHH
Confidence            99888899999999999987665544

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-40  Score=277.96  Aligned_cols=251  Identities=27%  Similarity=0.418  Sum_probs=209.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+...+.+..   ..++.++.||+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999998777766655432   246888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .+++|++||..+..+.+....|+++|+
T Consensus        82 id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKa  159 (259)
T PRK12384         82 VDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKF  159 (259)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHH
Confidence            9999999998765  7788899999999999999999999999999997765 689999999988888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCee-eccccccCCCchhhhhh-hhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAV-ATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v-~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+++++++++.|++++||+|++|+||.+ .|++.....+....... ..........+. .+.+++.+++|+++++++|+
T Consensus       160 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dv~~~~~~l~  238 (259)
T PRK12384        160 GGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDK-VPLKRGCDYQDVLNMLLFYA  238 (259)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHh-CcccCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999975 66665433221100000 000111111222 34589999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||..+
T Consensus       239 ~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        239 SPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             CcccccccCceEEEcCCEEe
Confidence            98888999999999999864

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-39  Score=274.23  Aligned_cols=245  Identities=32%  Similarity=0.439  Sum_probs=208.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+..++..+++.  .++.++.+|+++.+++.++++.+.+.+++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELG--ESALVIRADAGDVAAQKALAQALAEAFGR   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4679999999999999999999999999999999999877766665553  46778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+  .+++++++|..+..+.+....|+++|++
T Consensus        81 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a  156 (249)
T PRK06500         81 LDAVFINAGVAKF--APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAA  156 (249)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHH
Confidence            9999999998754  66778899999999999999999999999999853  4789999999988888999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++++++++.|++++||++++++||+++|++...........    ........+.. +.+++.+|+|+|+++++|+++.
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATL----DAVAAQIQALV-PLGRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccch----HHHHHHHHhcC-CCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999865321111100    01111122222 3477889999999999999988


Q ss_pred             CCCeeecEEEeCCccc
Q 023613          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+.+.+|||..
T Consensus       232 ~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        232 SAFIVGSEIIVDGGMS  247 (249)
T ss_pred             ccCccCCeEEECCCcc
Confidence            8899999999999965

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.8e-40  Score=284.27  Aligned_cols=245  Identities=27%  Similarity=0.409  Sum_probs=206.1

Q ss_pred             CccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHH
Q 023613           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      +.+..++++|++|||||++|||+++|++|+++|++|++++++. +..++..+++.. ..++.++.+|+++.+++.++++.
T Consensus         4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             ccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            3456779999999999999999999999999999999998753 445555555543 35788899999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-------CCceEEEEccccccc
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-------TKGTIISICSVAGAI  160 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~iv~isS~~~~~  160 (280)
                      +.+ ++++|++|||||+...  ..+.+.+.++|++.+++|+.+++.+++++.++|.++       ..|+||++||..+..
T Consensus        84 ~~~-~g~iD~li~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  160 (306)
T PRK07792         84 AVG-LGGLDIVVNNAGITRD--RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV  160 (306)
T ss_pred             HHH-hCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence            998 9999999999999765  678889999999999999999999999999988643       137999999999998


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.++...|+++|+++++|++.++.|+.++||+||+|+||. .|++....+......      ..   ..     ....+|
T Consensus       161 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~------~~---~~-----~~~~~p  225 (306)
T PRK07792        161 GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDV------EA---GG-----IDPLSP  225 (306)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchh------hh---hc-----cCCCCH
Confidence            8889999999999999999999999999999999999994 888754432211100      00   00     234589


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+++++++|+++...+++|+++.+|||....
T Consensus       226 e~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~  257 (306)
T PRK07792        226 EHVVPLVQFLASPAAAEVNGQVFIVYGPMVTL  257 (306)
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEEcCCeEEE
Confidence            99999999999998889999999999998653

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-40  Score=280.09  Aligned_cols=243  Identities=24%  Similarity=0.276  Sum_probs=208.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-------HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-------GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+.+.. ..++.++.+|+++++++.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999997642       3333333332 3468889999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC--CC
Q 023613           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--LG  164 (280)
Q Consensus        87 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--~~  164 (280)
                      ++.+.++++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.++|++++|..+..+.  ++
T Consensus        83 ~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  160 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINL--TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAP  160 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCC--CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCC
Confidence            999999999999999998654  67888999999999999999999999999999988777899999998887776  78


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCC-eeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY-AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      +..|+++|++++.+++.++.|+.++||+|++|+|| .++|++........                  .+.+++.+|+++
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~------------------~~~~~~~~p~~v  222 (273)
T PRK08278        161 HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGD------------------EAMRRSRTPEIM  222 (273)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccccc------------------ccccccCCHHHH
Confidence            89999999999999999999999999999999999 68998755432110                  012567899999


Q ss_pred             HHHHHHhcCCCCCCeeecEEEeCCccccccccccc
Q 023613          244 ANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       244 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~  278 (280)
                      |+++++|+++...+++|+++ +|++..+-.+.-+.
T Consensus       223 a~~~~~l~~~~~~~~~G~~~-~~~~~~~~~~~~~~  256 (273)
T PRK08278        223 ADAAYEILSRPAREFTGNFL-IDEEVLREAGVTDF  256 (273)
T ss_pred             HHHHHHHhcCccccceeEEE-eccchhhccCcchh
Confidence            99999999998889999988 79999887776543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.7e-39  Score=272.33  Aligned_cols=232  Identities=18%  Similarity=0.202  Sum_probs=194.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++|||||++|||++++++|+++|++|++++|+++...+..+..    .+.++.+|++++++++++++++.+.++++|+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            689999999999999999999999999999999876543333221    2567899999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--CceEEEEccccccccCCCCccchhhHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      +|||||....  ....+.+.++|++++++|+.+++.+++.++|.|.+.+  .++||++||..+..+.+++..|+++|+++
T Consensus        78 lv~~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal  155 (236)
T PRK06483         78 IIHNASDWLA--EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL  155 (236)
T ss_pred             EEECCccccC--CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence            9999998644  4456778999999999999999999999999998765  58999999999888888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      ++|++.++.|+++ +||||+|+||++.|+...    ...        ....... ..+.++...|+|+|+++.||++  .
T Consensus       156 ~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~~~--------~~~~~~~-~~~~~~~~~~~~va~~~~~l~~--~  219 (236)
T PRK06483        156 DNMTLSFAAKLAP-EVKVNSIAPALILFNEGD----DAA--------YRQKALA-KSLLKIEPGEEEIIDLVDYLLT--S  219 (236)
T ss_pred             HHHHHHHHHHHCC-CcEEEEEccCceecCCCC----CHH--------HHHHHhc-cCccccCCCHHHHHHHHHHHhc--C
Confidence            9999999999987 599999999999875321    110        0011111 2234788899999999999996  5


Q ss_pred             CCeeecEEEeCCcccc
Q 023613          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .+++|+++.+|||...
T Consensus       220 ~~~~G~~i~vdgg~~~  235 (236)
T PRK06483        220 CYVTGRSLPVDGGRHL  235 (236)
T ss_pred             CCcCCcEEEeCccccc
Confidence            7999999999999753

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-39  Score=279.01  Aligned_cols=247  Identities=31%  Similarity=0.448  Sum_probs=210.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+ ..+...+.+.. ..++.++.+|+++.++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999853 34444444433 24678899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||..... .++.+.+.++|++.+++|+.+++.+++++++.|.+  .++||++||..+..+.+++..|++
T Consensus       121 ~~~~iD~lI~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  197 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQ-QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSA  197 (290)
T ss_pred             HcCCCCEEEECCcccCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHH
Confidence            999999999999986432 56788999999999999999999999999999843  479999999999998899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|++.++++++.++.++||++++|+||+++|++.......+.        ...+ .+.. +.+++.+|+|+|+++++|
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~--------~~~~-~~~~-~~~~~~~~~dva~~~~~l  267 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEK--------VSQF-GSNT-PMQRPGQPEELAPAYVFL  267 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHH--------HHHH-HhcC-CcCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998655432110        1111 1222 347899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...+++|+.+.+|||+...
T Consensus       268 l~~~~~~~~G~~i~idgg~~~~  289 (290)
T PRK06701        268 ASPDSSYITGQMLHVNGGVIVN  289 (290)
T ss_pred             cCcccCCccCcEEEeCCCcccC
Confidence            9998899999999999997653

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-40  Score=282.95  Aligned_cols=239  Identities=27%  Similarity=0.416  Sum_probs=207.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.+....++..+.||++|+++++++++++.+.+
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            34688999999999999999999999999999999999998888887777644567777899999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+. .|+||++||..+..+.+++..|+++|
T Consensus        84 g~id~vI~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  160 (296)
T PRK05872         84 GGIDVVVANAGIASG--GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASK  160 (296)
T ss_pred             CCCCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHH
Confidence            999999999999764  788899999999999999999999999999998764 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++++|++.++.|++.+||+|++++||+++|++.........       ....+..+...+.++..+|+|+|++++++++
T Consensus       161 aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~-------~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~  233 (296)
T PRK05872        161 AGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLP-------AFRELRARLPWPLRRTTSVEKCAAAFVDGIE  233 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccch-------hHHHHHhhCCCcccCCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999999999998765432211       1112222222345788999999999999999


Q ss_pred             CCCCCeeec
Q 023613          253 DEARYISGT  261 (280)
Q Consensus       253 ~~~~~~~G~  261 (280)
                      ....+++|.
T Consensus       234 ~~~~~i~~~  242 (296)
T PRK05872        234 RRARRVYAP  242 (296)
T ss_pred             cCCCEEEch
Confidence            888777765

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.5e-39  Score=275.33  Aligned_cols=249  Identities=37%  Similarity=0.546  Sum_probs=210.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      |+++||||+++||++++++|+++|++|++++|+.+.++...+.+.. ..++.++.+|+++++++.++++.+.++++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999998777766666543 346788999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      +|||+|....  .++.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .+++|++||..+..+.+.+..|+++|++++
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  158 (254)
T TIGR02415        81 MVNNAGVAPI--TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVR  158 (254)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHH
Confidence            9999998654  6788999999999999999999999999999987765 479999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-h-hhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-A-MVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      .+++.++.++.+.||+|++|+||+++|++............. . ......+. . ..+.+++.+|+|+++++++|+++.
T Consensus       159 ~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~a~~~~~l~~~~  236 (254)
T TIGR02415       159 GLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFS-S-EIALGRPSEPEDVAGLVSFLASED  236 (254)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHH-h-hCCCCCCCCHHHHHHHHHhhcccc
Confidence            999999999999999999999999999986543221110000 0 00111221 1 233478999999999999999999


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++|+++.+|||+..
T Consensus       237 ~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       237 SDYITGQSILVDGGMVY  253 (254)
T ss_pred             cCCccCcEEEecCCccC
Confidence            99999999999999653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.1e-39  Score=272.80  Aligned_cols=249  Identities=39%  Similarity=0.554  Sum_probs=214.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+..+...+.+....++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999999998877776666543456888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||+|..... .++.+.+.++|++.+++|+.+++.+++.++++|.++..++||++||..+..+.++...|+.+|++
T Consensus        82 ~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~  160 (251)
T PRK07231         82 VDILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGA  160 (251)
T ss_pred             CCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHH
Confidence            99999999986432 56778899999999999999999999999999987778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++.+++.++.+++++||++++++||+++|++.........  .   .....+ .... +.+++.+|+|+|+++++|+++.
T Consensus       161 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~--~---~~~~~~-~~~~-~~~~~~~~~dva~~~~~l~~~~  233 (251)
T PRK07231        161 VITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPT--P---ENRAKF-LATI-PLGRLGTPEDIANAALFLASDE  233 (251)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccC--h---HHHHHH-hcCC-CCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999998665433210  0   001111 1222 3478899999999999999988


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++|+++.+|||...
T Consensus       234 ~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        234 ASWITGVTLVVDGGRCV  250 (251)
T ss_pred             ccCCCCCeEEECCCccC
Confidence            88999999999999753

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-39  Score=272.07  Aligned_cols=250  Identities=36%  Similarity=0.544  Sum_probs=214.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+..+...+.+....++.++.||++|+++++++++.+.+.+++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999998777766666543456888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||+|....  ..+.+.+.+++++.+++|+.+++.+.+.+++.|++++.++|+++||..+..+.++...|+++|++
T Consensus        82 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  159 (252)
T PRK06138         82 LDVLVNNAGFGCG--GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGA  159 (252)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHH
Confidence            9999999998755  67788899999999999999999999999999988778999999999999888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++.+++.++.+++.+|+++++++||.+.|++....+.......    ........ ..+.+++.+++|+++++++++++.
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~d~a~~~~~l~~~~  234 (252)
T PRK06138        160 IASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPE----ALREALRA-RHPMNRFGTAEEVAQAALFLASDE  234 (252)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChH----HHHHHHHh-cCCCCCCcCHHHHHHHHHHHcCch
Confidence            9999999999999999999999999999998665433211110    01111111 223356889999999999999998


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++|+.+.+|||+..
T Consensus       235 ~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        235 SSFATGTTLVVDGGWLA  251 (252)
T ss_pred             hcCccCCEEEECCCeec
Confidence            88999999999999753

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-39  Score=273.69  Aligned_cols=241  Identities=24%  Similarity=0.328  Sum_probs=204.3

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCc-----------chHHHHHHHhCC-CCCeEEEecCCCCHHH
Q 023613           15 RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQD-----------NLGQQVCQSLGG-EPDTFFCHCDVTKEED   80 (280)
Q Consensus        15 ~l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~-----------~~~~~~~~~~~~-~~~~~~~~~D~~~~~~   80 (280)
                      ++++|++|||||++  |||+++|++|+++|++|++++|++           .....+.+.+.. ..++.++.+|++++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            46899999999994  999999999999999999999871           111113333322 2468889999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc
Q 023613           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI  160 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  160 (280)
                      +.++++++.+.++++|++|||||+...  .++.+.+.+++++.+++|+.+++.+.+++++.|.++..++||++||..+..
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTH--TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            999999999999999999999998654  678889999999999999999999999999999777778999999999888


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.+++..|+++|++++++++.++.++..+||+|++++||+++|++.......            . ... ..+.+++.+|
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~------------~-~~~-~~~~~~~~~~  225 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKH------------H-LVP-KFPQGRVGEP  225 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHH------------h-hhc-cCCCCCCcCH
Confidence            8888999999999999999999999999999999999999999874321100            0 011 1122678899


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+|+++++|+++...+++|+++.+|||+++
T Consensus       226 ~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~~  256 (256)
T PRK12748        226 VDAARLIAFLVSEEAKWITGQVIHSEGGFSR  256 (256)
T ss_pred             HHHHHHHHHHhCcccccccCCEEEecCCccC
Confidence            9999999999999888999999999999864

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-39  Score=269.31  Aligned_cols=220  Identities=28%  Similarity=0.449  Sum_probs=198.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .-+.+|++||||||++||||++|.+|++.|+++++.+.+.+...+..+.+...++++.+.||+++.+++.++++++++..
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            34678999999999999999999999999999999999998888887777654588999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |.+|++|||||+...  .++.+.+.+++++++++|+.+++..+++++|.|.+.++|+||.|+|.+|+.+.++...||+||
T Consensus       113 G~V~ILVNNAGI~~~--~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK  190 (300)
T KOG1201|consen  113 GDVDILVNNAGIVTG--KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASK  190 (300)
T ss_pred             CCceEEEeccccccC--CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhH
Confidence            999999999999876  889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCC---CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          173 HAVLGLNKNVAAELGK---YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       173 ~al~~~~~~la~e~~~---~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +|+.+|+++|..|+..   +||+...|+|+.++|.|.....+..                   ..-...+|+.||+.++.
T Consensus       191 ~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~-------------------~l~P~L~p~~va~~Iv~  251 (300)
T KOG1201|consen  191 FAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP-------------------TLAPLLEPEYVAKRIVE  251 (300)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc-------------------cccCCCCHHHHHHHHHH
Confidence            9999999999999964   5799999999999999977622211                   11456789999999887


Q ss_pred             hcCC
Q 023613          250 LASD  253 (280)
Q Consensus       250 L~s~  253 (280)
                      .+..
T Consensus       252 ai~~  255 (300)
T KOG1201|consen  252 AILT  255 (300)
T ss_pred             HHHc
Confidence            6643

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=6.3e-39  Score=269.99  Aligned_cols=242  Identities=29%  Similarity=0.455  Sum_probs=210.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||+++||+++++.|+++|+.|++.+|+.+.++...+.+.  .++.++.+|+++.++++++++++.+.+++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG--ERVKIFPANLSDRDEVKALGQKAEADLEG   80 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6789999999999999999999999999999999998887777655543  35778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.+.+.+++.++||++||..+..+.+++..|+++|++
T Consensus        81 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a  158 (245)
T PRK12936         81 VDILVNNAGITKD--GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAG  158 (245)
T ss_pred             CCEEEECCCCCCC--CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHH
Confidence            9999999998755  66778899999999999999999999999998877777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +..+++.++.++..+|+++++++||+++|++.....+..          ...... ..+.+++.+|+|+++++++|+++.
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~----------~~~~~~-~~~~~~~~~~~~ia~~~~~l~~~~  227 (245)
T PRK12936        159 MIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQ----------KEAIMG-AIPMKRMGTGAEVASAVAYLASSE  227 (245)
T ss_pred             HHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHH----------HHHHhc-CCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999865432111          000111 123477889999999999999988


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++|+++.+|||+..
T Consensus       228 ~~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        228 AAYVTGQTIHVNGGMAM  244 (245)
T ss_pred             ccCcCCCEEEECCCccc
Confidence            88999999999999764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.8e-39  Score=271.69  Aligned_cols=245  Identities=29%  Similarity=0.377  Sum_probs=209.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++|++|||||++|||++++++|+++|++|++ ..|+.+..++..+.++. ..++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999876 57877766666555543 35678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++++|.+++.++||++||..+..+.+++..|+++|+
T Consensus        82 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  159 (250)
T PRK08063         82 RLDVFVNNAASGVL--RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKA  159 (250)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHH
Confidence            99999999998754  6788899999999999999999999999999998877899999999988888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      ++++|+++++.++.+.||++++|+||+++|++.... +.....      .... .. ..+.+++++++|+|+++++++++
T Consensus       160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~-~~~~~~------~~~~-~~-~~~~~~~~~~~dva~~~~~~~~~  230 (250)
T PRK08063        160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHF-PNREEL------LEDA-RA-KTPAGRMVEPEDVANAVLFLCSP  230 (250)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhc-cCchHH------HHHH-hc-CCCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999986542 211111      1111 11 12236789999999999999998


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||...
T Consensus       231 ~~~~~~g~~~~~~gg~~~  248 (250)
T PRK08063        231 EADMIRGQTIIVDGGRSL  248 (250)
T ss_pred             hhcCccCCEEEECCCeee
Confidence            888999999999999764

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-38  Score=267.51  Aligned_cols=232  Identities=31%  Similarity=0.484  Sum_probs=192.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++|++|||||++|||+++|++|+++|++|+++.+ +.+..+++.+..    .+.++.+|+++.+++.++++    .++
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~----~~~~~~~D~~~~~~~~~~~~----~~~   74 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET----GATAVQTDSADRDAVIDVVR----KSG   74 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh----CCeEEecCCCCHHHHHHHHH----HhC
Confidence            478999999999999999999999999999988766 444444443433    24567899999998877665    357


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||....  .+..+.+.++|++.+++|+.+++.+++.+.+.|.+  .+++|++||..+. .+.++...|+++|
T Consensus        75 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sK  150 (237)
T PRK12742         75 ALDILVVNAGIAVF--GDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASK  150 (237)
T ss_pred             CCcEEEECCCCCCC--CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhH
Confidence            89999999998754  56778899999999999999999999999999853  5899999998874 5778889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++.++||+|++|+||+++|++.....+           ......... +.+++.+|+|+++++++|++
T Consensus       151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-----------~~~~~~~~~-~~~~~~~p~~~a~~~~~l~s  218 (237)
T PRK12742        151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-----------MKDMMHSFM-AIKRHGRPEEVAGMVAWLAG  218 (237)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-----------HHHHHHhcC-CCCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999998543211           011111222 34788999999999999999


Q ss_pred             CCCCCeeecEEEeCCccc
Q 023613          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+.+.+|||+.
T Consensus       219 ~~~~~~~G~~~~~dgg~~  236 (237)
T PRK12742        219 PEASFVTGAMHTIDGAFG  236 (237)
T ss_pred             cccCcccCCEEEeCCCcC
Confidence            999999999999999964

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-39  Score=272.15  Aligned_cols=255  Identities=30%  Similarity=0.434  Sum_probs=213.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|++|||||+++||+++++.|+++|++|++++|+++..++..+.+.. ..++.++.+|+++.++++++++.+.+.
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999998877776666543 246788999999999999999999998


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhc-ccCCCceEEEEccccccccCCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIM-IPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++|||+|....  ..+.+.+.+++++.+++|+.+++.+++.+++.| .+.+.++||++||..+..+.+....|++
T Consensus        82 ~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~  159 (262)
T PRK13394         82 FGSVDILVSNAGIQIV--NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVT  159 (262)
T ss_pred             cCCCCEEEECCccCCC--CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHH
Confidence            9999999999998754  677788899999999999999999999999999 6666789999999998888888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhh--hhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +|++++++++.++.++++.||++++++||+++|++....++......  ........++.. ....+++++++|++++++
T Consensus       160 sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~a~~  238 (262)
T PRK13394        160 AKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG-KTVDGVFTTVEDVAQTVL  238 (262)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc-CCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999998654433211100  000111112222 222378999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCccc
Q 023613          249 FLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++++.....++|+++.+|||+.
T Consensus       239 ~l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        239 FLSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HHcCccccCCcCCEEeeCCcee
Confidence            9999877889999999999974

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=271.41  Aligned_cols=245  Identities=27%  Similarity=0.400  Sum_probs=211.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+.. ..++.++.+|+++++++.++++++.+.++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999998777766666543 24678889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhccc-CCCceEEEEccccccccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-QTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||....  ..+.+.+.+++++.+++|+.+++.+.+++.+.|.+ .+.+++|++||..+..+.++...|+++|
T Consensus        87 ~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  164 (263)
T PRK07814         87 RLDIVVNNVGGTMP--NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK  164 (263)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence            99999999998654  67788999999999999999999999999999977 4568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.|+.+ +|++++|+||++.|++........ .       +...+... .+..+..+|+|+|++++++++
T Consensus       165 ~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~-~-------~~~~~~~~-~~~~~~~~~~~va~~~~~l~~  234 (263)
T PRK07814        165 AALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAAND-E-------LRAPMEKA-TPLRRLGDPEDIAAAAVYLAS  234 (263)
T ss_pred             HHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCH-H-------HHHHHHhc-CCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999987 699999999999999764321111 1       11111222 233678899999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||+.+
T Consensus       235 ~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        235 PAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             ccccCcCCCEEEECCCccC
Confidence            8888999999999999888

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-38  Score=271.03  Aligned_cols=245  Identities=33%  Similarity=0.498  Sum_probs=209.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||+++||+++|++|+++|++|++++|+.+.++...+.+.. ..++.++.||++|+++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999998777666655543 2467789999999999999999999998


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHh-cccCCCceEEEEccccccccCCC----Ccc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI-MIPQTKGTIISICSVAGAIGGLG----PHA  167 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~iv~isS~~~~~~~~~----~~~  167 (280)
                      +++|++|||||....  .+..+.+.++|++.+++|+.+++.+++++.++ |.+++.+++|++||..+..+.++    +..
T Consensus        88 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~  165 (259)
T PRK08213         88 GHVDILVNNAGATWG--APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIA  165 (259)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcch
Confidence            999999999998654  56778899999999999999999999999998 76666789999999887766543    489


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+++|++++.+++.+++++.++||++++++||+++|++.....+..         .+. +... .+..++.+++|+++.+
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~---------~~~-~~~~-~~~~~~~~~~~va~~~  234 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERL---------GED-LLAH-TPLGRLGDDEDLKGAA  234 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHH---------HHH-HHhc-CCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999999865433211         111 1222 2347788999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++|+++...+++|+.+.+|||++.
T Consensus       235 ~~l~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        235 LLLASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             HHHhCccccCccCCEEEECCCeec
Confidence            999999999999999999999864

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-39  Score=271.78  Aligned_cols=244  Identities=35%  Similarity=0.568  Sum_probs=207.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .++||++|||||++|||++++++|+++|++|++++|+.+..+...+.+..    .++.+|++++++++++++++.+.+++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG----LFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----cEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999998776666555432    47889999999999999999998899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-CCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~~~~Y~~sK~  173 (280)
                      +|++|||||...+....+.+.+.+.|++.+++|+.+++.+++.++|+|.+++.++||++||..+..+. +++..|+++|+
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKa  159 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKG  159 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHH
Confidence            99999999986432245678899999999999999999999999999987777999999998877765 36788999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.+++.++.++.++||++++|+||+++|++....+......      ......  ..+.+++.+|+|+++++.+|+++
T Consensus       160 al~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~a~~~~~l~~~  231 (255)
T PRK06057        160 GVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPER------AARRLV--HVPMGRFAEPEEIAAAVAFLASD  231 (255)
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHH------HHHHHh--cCCCCCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999876543321110      111111  12347899999999999999999


Q ss_pred             CCCCeeecEEEeCCccc
Q 023613          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+.+.+|||+.
T Consensus       232 ~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        232 DASFITASTFLVDGGIS  248 (255)
T ss_pred             cccCccCcEEEECCCee
Confidence            99999999999999975

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=7.5e-39  Score=270.42  Aligned_cols=248  Identities=30%  Similarity=0.479  Sum_probs=212.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      |++|++|||||+++||++++++|+++|++|++++|+.+..+++.+.+.. ..++.++.+|+++.++++++++.+.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999999999999999998777766555533 246888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.+++.|.+.+.++++++||..+..+.++...|+++|+|
T Consensus        81 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a  158 (250)
T TIGR03206        81 VDVLVNNAGWDKF--GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGG  158 (250)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHH
Confidence            9999999998654  67788899999999999999999999999999987777899999999999998999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++.++++++.++.+.|++++.++||+++|++..............   ...+ ... .+.+++.+++|+|+++++|+++.
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~---~~~~-~~~-~~~~~~~~~~dva~~~~~l~~~~  233 (250)
T TIGR03206       159 LVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKL---REAF-TRA-IPLGRLGQPDDLPGAILFFSSDD  233 (250)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHH---HHHH-Hhc-CCccCCcCHHHHHHHHHHHcCcc
Confidence            999999999999988999999999999999865543211111110   1111 122 23478899999999999999999


Q ss_pred             CCCeeecEEEeCCccc
Q 023613          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+++.+|||..
T Consensus       234 ~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       234 ASFITGQVLSVSGGLT  249 (250)
T ss_pred             cCCCcCcEEEeCCCcc
Confidence            9999999999999965

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.7e-39  Score=298.45  Aligned_cols=249  Identities=33%  Similarity=0.502  Sum_probs=213.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.  .++.++.+|++++++++++++++.+.++++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG--PDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999999999888877766664  456788999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCc-eEEEEccccccccCCCCccchhhHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      |++|||||+..+...++.+.+.++|++.+++|+.+++.++++++|+|.+++.| +||++||..+..+.+++..|+++|++
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaa  160 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAA  160 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHH
Confidence            99999999853322567789999999999999999999999999999776555 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++|++.++.|+.++||+|++|+||+++|++.....+.....      .... .. ..+.+++.+|+|+|+.+++|+++.
T Consensus       161 l~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~------~~~~-~~-~~~~~~~~~~~~va~~v~~l~~~~  232 (520)
T PRK06484        161 VISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLD------PSAV-RS-RIPLGRLGRPEEIAEAVFFLASDQ  232 (520)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhh------hHHH-Hh-cCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999865432211100      0111 11 123367889999999999999998


Q ss_pred             CCCeeecEEEeCCccccccc
Q 023613          255 ARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ..+++|+++.+|||+.....
T Consensus       233 ~~~~~G~~~~~~gg~~~~~~  252 (520)
T PRK06484        233 ASYITGSTLVVDGGWTVYGG  252 (520)
T ss_pred             ccCccCceEEecCCeecccc
Confidence            99999999999999876544

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.4e-39  Score=267.84  Aligned_cols=232  Identities=33%  Similarity=0.518  Sum_probs=196.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++||||++|||++++++|+++|++|++++|+....      .  ..++.++.+|++++      ++++.+.+++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~--~~~~~~~~~D~~~~------~~~~~~~~~~   67 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L--SGNFHFLQLDLSDD------LEPLFDWVPS   67 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c--CCcEEEEECChHHH------HHHHHHhhCC
Confidence            47899999999999999999999999999999999975431      1  23577889999887      4445556689


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        68 id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  146 (235)
T PRK06550         68 VDILCNTAGILDDY-KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHA  146 (235)
T ss_pred             CCEEEECCCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHH
Confidence            99999999976432 56778899999999999999999999999999987778999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++++++.++.|+.++||++++|+||+++|++....++...        ......+. .+.+++.+|+|+|+++++|+++.
T Consensus       147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGG--------LADWVARE-TPIKRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchH--------HHHHHhcc-CCcCCCCCHHHHHHHHHHHcChh
Confidence            9999999999999999999999999999998654433211        11111222 23488999999999999999998


Q ss_pred             CCCeeecEEEeCCccc
Q 023613          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+++.+|||++
T Consensus       218 ~~~~~g~~~~~~gg~~  233 (235)
T PRK06550        218 ADYMQGTIVPIDGGWT  233 (235)
T ss_pred             hccCCCcEEEECCcee
Confidence            8999999999999974

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-38  Score=266.03  Aligned_cols=241  Identities=31%  Similarity=0.433  Sum_probs=204.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||++|||+++|+.|+++|++|+++.|+.+ ..+...+.+.. ..++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            477999999999999999999999999999988877543 33444444432 3568889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  .++.+.+.++|++++++|+.+++.+++++++.|.+  .++||++||..+..+.+++..|+++|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (245)
T PRK12937         82 GRIDVLVNNAGVMPL--GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASK  157 (245)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHH
Confidence            999999999998754  67788899999999999999999999999999854  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++...|+++++++||+++|++........         ....+.+.. +.+++.+|+|+++.+++|++
T Consensus       158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~d~a~~~~~l~~  227 (245)
T PRK12937        158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAE---------QIDQLAGLA-PLERLGTPEEIAAAVAFLAG  227 (245)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHH---------HHHHHHhcC-CCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999854322111         111112222 33788899999999999999


Q ss_pred             CCCCCeeecEEEeCCcc
Q 023613          253 DEARYISGTNLMVDGGF  269 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~  269 (280)
                      +...+++|+++.+|||+
T Consensus       228 ~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        228 PDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             ccccCccccEEEeCCCC
Confidence            88889999999999986

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-38  Score=268.29  Aligned_cols=253  Identities=36%  Similarity=0.511  Sum_probs=214.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +++|++|||||+++||+++|++|+++|++|++++|+.+..++..+.+.. ..++.++.||+++++++.++++.+.+.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999999999999999998887777666543 357888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  ..+.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|++
T Consensus        82 ~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a  159 (258)
T PRK12429         82 VDILVNNAGIQHV--APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHG  159 (258)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHH
Confidence            9999999998755  67788899999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhh--hhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++.+++.++.++.++||++++++||+++|++.....+.....  ............... +.+++++++|+|+++++|+.
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~~~~~l~~  238 (258)
T PRK12429        160 LIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLV-PQKRFTTVEEIADYALFLAS  238 (258)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccC-CccccCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999865433221100  000000111111111 23689999999999999998


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      .....++|+++.+|||++.
T Consensus       239 ~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        239 FAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             ccccCccCCeEEeCCCEec
Confidence            8778899999999999864

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1e-38  Score=269.41  Aligned_cols=225  Identities=21%  Similarity=0.247  Sum_probs=193.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      |+++||||++|||+++|++|+ +|++|++++|+.+.++++.+++...  ..+.++.||++|+++++++++++.+.++++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 5999999999998888877776532  2477889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||||....  ....+.+.+++.+.+++|+.+++.+++.++|.|.++. .|+||++||..+..+.+++..|+++|+|+
T Consensus        80 ~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  157 (246)
T PRK05599         80 LAVVAFGILGD--QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGL  157 (246)
T ss_pred             EEEEecCcCCC--chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHH
Confidence            99999998654  4456677788899999999999999999999997664 69999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      ++|+++++.|+.++||+||+++||+++|++.....+.                      ....+|+|+|+.++++++...
T Consensus       158 ~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~----------------------~~~~~pe~~a~~~~~~~~~~~  215 (246)
T PRK05599        158 DAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA----------------------PMSVYPRDVAAAVVSAITSSK  215 (246)
T ss_pred             HHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC----------------------CCCCCHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999999985432211                      113589999999999997643


Q ss_pred             CCeeecEEEeCCcccc
Q 023613          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .   ++.+.++++...
T Consensus       216 ~---~~~~~~~~~~~~  228 (246)
T PRK05599        216 R---STTLWIPGRLRV  228 (246)
T ss_pred             C---CceEEeCccHHH
Confidence            2   556777777644

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-38  Score=277.29  Aligned_cols=227  Identities=25%  Similarity=0.322  Sum_probs=196.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. ..++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            3468899999999999999999999999999999999999888877776643 357788899999999999999999998


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||+++|..+..+.|++..|+++
T Consensus        82 ~g~iD~lVnnAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~as  159 (330)
T PRK06139         82 GGRIDVWVNNVGVGAV--GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSAS  159 (330)
T ss_pred             cCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHH
Confidence            8999999999998765  77889999999999999999999999999999988878999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCC-CeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          172 KHAVLGLNKNVAAELGKY-GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~-gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      |+++.+|+++++.|+..+ ||+|++|+||+++|++.........              ....+...+.+|+++|++++++
T Consensus       160 Kaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~--------------~~~~~~~~~~~pe~vA~~il~~  225 (330)
T PRK06139        160 KFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG--------------RRLTPPPPVYDPRRVAKAVVRL  225 (330)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc--------------ccccCCCCCCCHHHHHHHHHHH
Confidence            999999999999999875 8999999999999998643211100              0001113467999999999999


Q ss_pred             cCCCC
Q 023613          251 ASDEA  255 (280)
Q Consensus       251 ~s~~~  255 (280)
                      +....
T Consensus       226 ~~~~~  230 (330)
T PRK06139        226 ADRPR  230 (330)
T ss_pred             HhCCC
Confidence            86543

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.3e-38  Score=270.31  Aligned_cols=239  Identities=18%  Similarity=0.205  Sum_probs=195.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----cCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           20 VALITGGATGIGESTVRLFHK----HGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++|||||++|||+++|++|++    +|++|++++|+.+.++++.+.+..   ..++.++.+|++++++++++++.+.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    799999999999888877776653   2467889999999999999999998876


Q ss_pred             CC----ccEEEECCCCCCCCCCCCCC-CCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--CceEEEEccccccccCCCC
Q 023613           93 GT----LDIMVNNAGISGAPCPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        93 ~~----~d~li~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~  165 (280)
                      +.    .|++|||||..........+ .+.++|++.+++|+.+++.+++.++|.|.++.  .++||++||..+..+.+++
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            64    36999999986432122333 35789999999999999999999999997653  4799999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+++|+|+++|+++++.|++++||+||+|+||+++|++.....+.....     .....+.... +.+++.+|+|+|+
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~p~eva~  235 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDP-----DMRKGLQELK-AKGKLVDPKVSAQ  235 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCCh-----hHHHHHHHHH-hcCCCCCHHHHHH
Confidence            999999999999999999999999999999999999999865432211000     0111122222 3388999999999


Q ss_pred             HHHHhcCCCCCCeeecEEEe
Q 023613          246 AVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~  265 (280)
                      .+++|++ ..++++|+.+.+
T Consensus       236 ~~~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       236 KLLSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHHHHHh-cCCcCCcceeec
Confidence            9999996 567999998875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-38  Score=263.91  Aligned_cols=221  Identities=19%  Similarity=0.255  Sum_probs=189.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++.+++..+.+.. ..++..+.+|++++++++++++++.++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999888877766643 24677889999999999999999999998


Q ss_pred             -CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023613           94 -TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        94 -~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       ++|++|||||....+ .++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .|+||++||..+.   +++..|+++
T Consensus        82 ~~iD~li~nag~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~as  157 (227)
T PRK08862         82 RAPDVLVNNWTSSPLP-SLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESS  157 (227)
T ss_pred             CCCCEEEECCccCCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHH
Confidence             999999999865432 5788899999999999999999999999999997654 6899999997543   567899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+.+|+++++.|++++||+||+|+||+++|+...  .+.   .      +...             .+|++.+..||+
T Consensus       158 Kaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~--~~~---~------~~~~-------------~~~~~~~~~~l~  213 (227)
T PRK08862        158 NALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL--DAV---H------WAEI-------------QDELIRNTEYIV  213 (227)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc--CHH---H------HHHH-------------HHHHHhheeEEE
Confidence            999999999999999999999999999999999311  110   1      1110             179999999999


Q ss_pred             CCCCCCeeecEEEe
Q 023613          252 SDEARYISGTNLMV  265 (280)
Q Consensus       252 s~~~~~~~G~~i~~  265 (280)
                      +  +.++||+.+..
T Consensus       214 ~--~~~~tg~~~~~  225 (227)
T PRK08862        214 A--NEYFSGRVVEA  225 (227)
T ss_pred             e--cccccceEEee
Confidence            6  67999998764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=4.1e-38  Score=264.36  Aligned_cols=235  Identities=23%  Similarity=0.394  Sum_probs=200.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +|||||++|||+++|++|+++|++|++++|+ .+..+...+.+.. ..++.++.+|+++.+++.++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999988865 4445555555432 3568889999999999999999999888999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHH-HhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      |||+|....  .++.+.+.++|++.+++|+.+++.+++.++ |.+.+++.++||++||..+..+.+++..|+++|++++.
T Consensus        81 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  158 (239)
T TIGR01831        81 VLNAGITRD--AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIG  158 (239)
T ss_pred             EECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            999998765  567788999999999999999999999875 55554567899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCC
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  257 (280)
                      +++.++.|+..+||++++|+||+++|++.....+.          .... .+ ..+.+++.+|+|++++++||+++...+
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~-~~-~~~~~~~~~~~~va~~~~~l~~~~~~~  226 (239)
T TIGR01831       159 ATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD----------LDEA-LK-TVPMNRMGQPAEVASLAGFLMSDGASY  226 (239)
T ss_pred             HHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH----------HHHH-Hh-cCCCCCCCCHHHHHHHHHHHcCchhcC
Confidence            99999999999999999999999999986543111          1111 11 233488999999999999999999999


Q ss_pred             eeecEEEeCCcc
Q 023613          258 ISGTNLMVDGGF  269 (280)
Q Consensus       258 ~~G~~i~~dgG~  269 (280)
                      ++|+.+.+|||+
T Consensus       227 ~~g~~~~~~gg~  238 (239)
T TIGR01831       227 VTRQVISVNGGM  238 (239)
T ss_pred             ccCCEEEecCCc
Confidence            999999999996

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=9.2e-38  Score=262.89  Aligned_cols=241  Identities=30%  Similarity=0.459  Sum_probs=205.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|++|||||+++||+++|++|+++|++|++++|+.+ ......+.... ..++.++.+|+++.+++.++++.+.++++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            368999999999999999999999999999999854 22223232222 2468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||+|....  ..+.+.+.++|++.+++|+.+++.+++.+++.|.+.+.++||++||..+..+.+++..|+++|+++
T Consensus        82 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~  159 (245)
T PRK12824         82 DILVNNAGITRD--SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGM  159 (245)
T ss_pred             CEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHH
Confidence            999999998754  678889999999999999999999999999999877789999999999998889999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      +++++.++.++.++||++++++||+++|++.+...+.          ....+.. ..+.+.+.+++|+++++.+|+++..
T Consensus       160 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~va~~~~~l~~~~~  228 (245)
T PRK12824        160 IGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPE----------VLQSIVN-QIPMKRLGTPEEIAAAVAFLVSEAA  228 (245)
T ss_pred             HHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHH----------HHHHHHh-cCCCCCCCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999986543221          1111111 2234778899999999999999888


Q ss_pred             CCeeecEEEeCCcccc
Q 023613          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .+++|+.+.+|||+.+
T Consensus       229 ~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        229 GFITGETISINGGLYM  244 (245)
T ss_pred             cCccCcEEEECCCeec
Confidence            8999999999999854

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.4e-38  Score=266.73  Aligned_cols=240  Identities=27%  Similarity=0.426  Sum_probs=200.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|++|||||++|||+++|+.|+++|++|++++|+.+..++..+.+..   ...+.++.||++|++++.++++.+.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999999999999998887777666632   2345667999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC--------
Q 023613           93 GTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--------  163 (280)
Q Consensus        93 ~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~--------  163 (280)
                      +++|++|||||.... +...+.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+..        
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            999999999986432 12567889999999999999999999999999999887778999999987754311        


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHH
Q 023613          164 --GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       164 --~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                        ....|+++|++++++++.++.|+.++||++++++||.+.++....      .       ...+ .. ..+..++.+|+
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~------~-------~~~~-~~-~~~~~~~~~~~  226 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA------F-------LNAY-KK-CCNGKGMLDPD  226 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH------H-------HHHH-Hh-cCCccCCCCHH
Confidence              224699999999999999999999999999999999987764110      0       0111 11 12236789999


Q ss_pred             HHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          242 DVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       242 dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+|+++++++++...+++|+.+.+|||+.
T Consensus       227 dva~~~~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        227 DICGTLVFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             HhhhhHhheeccccccccCceEEecCCcc
Confidence            99999999999888899999999999964

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-37  Score=266.92  Aligned_cols=247  Identities=30%  Similarity=0.356  Sum_probs=211.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+..+...+.+..   ..++.++.+|+++++++.++++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998776665555432   246788899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||..... .++.+.+.++|++++++|+.+++.+++++++.|.+++.++|+++||..+..+.++...|+++
T Consensus        84 ~~~~d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  162 (276)
T PRK05875         84 HGRLHGVVHCAGGSETI-GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVT  162 (276)
T ss_pred             cCCCCEEEECCCcccCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHH
Confidence            99999999999976432 56778899999999999999999999999999987777899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++.++.++...+|++++|+||+++|++..........       ...+ .. ..+.+++.+++|+|+++++|+
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~-------~~~~-~~-~~~~~~~~~~~dva~~~~~l~  233 (276)
T PRK05875        163 KSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPEL-------SADY-RA-CTPLPRVGEVEDVANLAMFLL  233 (276)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHH-------HHHH-Hc-CCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999986543322110       0111 11 123477889999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +....+++|+.+.+|||+..
T Consensus       234 ~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        234 SDAASWITGQVINVDGGHML  253 (276)
T ss_pred             CchhcCcCCCEEEECCCeec
Confidence            98888999999999999764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.2e-37  Score=262.79  Aligned_cols=242  Identities=33%  Similarity=0.571  Sum_probs=204.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||++|||+++|++|+++|++|+++.+ +++..++..+.+... .++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            367999999999999999999999999999987654 445555555555432 468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||....  ..+.+.+.+++++.+++|+.+++.++++++|.|.+...+++|++||..+..+.+++..|+++|
T Consensus        83 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  160 (247)
T PRK12935         83 GKVDILVNNAGITRD--RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAK  160 (247)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHH
Confidence            999999999998755  667788999999999999999999999999999877778999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++.+.||+++.++||+++|++.... +...        ...+. .. ...+++..|+|++++++++++
T Consensus       161 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-~~~~--------~~~~~-~~-~~~~~~~~~edva~~~~~~~~  229 (247)
T PRK12935        161 AGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV-PEEV--------RQKIV-AK-IPKKRFGQADEIAKGVVYLCR  229 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc-cHHH--------HHHHH-Hh-CCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999998999999999999999875532 1110        11111 11 123678999999999999997


Q ss_pred             CCCCCeeecEEEeCCccc
Q 023613          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      .. .+++|+.+.+|||+.
T Consensus       230 ~~-~~~~g~~~~i~~g~~  246 (247)
T PRK12935        230 DG-AYITGQQLNINGGLY  246 (247)
T ss_pred             cc-cCccCCEEEeCCCcc
Confidence            64 589999999999974

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-38  Score=265.63  Aligned_cols=246  Identities=24%  Similarity=0.366  Sum_probs=194.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~----~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ..+++|++|||||++|||+++|+.|+++|++|+++.++    .+..+...+.+.. ..++.++.+|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            45789999999999999999999999999997666543    2333344444432 246788999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+.++++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+  .+++++++|.....+.+.+..|
T Consensus        84 ~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~~~~~~~Y  159 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLK--KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAFTPFYSAY  159 (257)
T ss_pred             HHhhCCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcccCCCcccc
Confidence            9999999999999998654  67788899999999999999999999999999854  4678776433333356788999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccC-CCCCCCHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-QGTELTANDVANAV  247 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~  247 (280)
                      +++|+|+++|+++++.|+.++||+|++++||++.|++......... ..     .........++ ..++.+|+|+|+++
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~dva~~~  233 (257)
T PRK12744        160 AGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEA-VA-----YHKTAAALSPFSKTGLTDIEDIVPFI  233 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccch-hh-----cccccccccccccCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999998644221110 00     00000111111 13788999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+++ ..+++|+++.+|||+.
T Consensus       234 ~~l~~~-~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        234 RFLVTD-GWWITGQTILINGGYT  255 (257)
T ss_pred             HHhhcc-cceeecceEeecCCcc
Confidence            999995 5789999999999975

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-38  Score=262.83  Aligned_cols=231  Identities=21%  Similarity=0.276  Sum_probs=200.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCC--HHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTK--EEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~--~~~~~~~~~~~~~   90 (280)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+...+.+..  ...+.++.+|+++  .+++.++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999877777666532  2356778899975  6789999999998


Q ss_pred             Hc-CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           91 KF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .+ +++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|.|.+.+.+++++++|..+..+.+++..|+
T Consensus        83 ~~~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  161 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYAL-SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG  161 (239)
T ss_pred             HhCCCCCEEEEeccccccC-CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH
Confidence            88 7899999999976432 567889999999999999999999999999999877779999999999999988899999


Q ss_pred             hhHHHHHHHHHHHHHHHCCC-CeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKY-GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~-gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++|++++.+++.++.|+..+ +|+|++|.||+++|++.....+....                   .+..+++|+++.++
T Consensus       162 ~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~  222 (239)
T PRK08703        162 ASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAK-------------------SERKSYGDVLPAFV  222 (239)
T ss_pred             HhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCCc-------------------cccCCHHHHHHHHH
Confidence            99999999999999999887 69999999999999986543332110                   23469999999999


Q ss_pred             HhcCCCCCCeeecEEEe
Q 023613          249 FLASDEARYISGTNLMV  265 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~  265 (280)
                      +++++...++||+++.+
T Consensus       223 ~~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        223 WWASAESKGRSGEIVYL  239 (239)
T ss_pred             HHhCccccCcCCeEeeC
Confidence            99999999999999864

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-38  Score=260.33  Aligned_cols=216  Identities=23%  Similarity=0.251  Sum_probs=181.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      +++||||++|||+++++.|+++|++|++++|+.+.++...+.+    .+.++.+|++++++++++++.+.   +++|++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~---~~id~lv   74 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL----DVDAIVCDNTDPASLEEARGLFP---HHLDTIV   74 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCcEEecCCCCHHHHHHHHHHHh---hcCcEEE
Confidence            4899999999999999999999999999999988777665544    24578899999999999888764   2799999


Q ss_pred             ECCCCCCCC----CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613          100 NNAGISGAP----CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus       100 ~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ||||.....    ..++.+ +.++|++.+++|+.+++.++++++|.|.+  .|+||+++|..    .+.+..|+++|+|+
T Consensus        75 ~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal  147 (223)
T PRK05884         75 NVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAAL  147 (223)
T ss_pred             ECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHH
Confidence            999853210    012334 57899999999999999999999999964  48999999976    35668999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      .+|++.++.|++++||+||+|+||+++|++.....                   ..+    ..+|+|+++.++||+++..
T Consensus       148 ~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~-------------------~~p----~~~~~~ia~~~~~l~s~~~  204 (223)
T PRK05884        148 SNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS-------------------RTP----PPVAAEIARLALFLTTPAA  204 (223)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc-------------------CCC----CCCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999998632110                   011    1389999999999999999


Q ss_pred             CCeeecEEEeCCccccc
Q 023613          256 RYISGTNLMVDGGFTSV  272 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~~  272 (280)
                      .+++|+.+.+|||+.-+
T Consensus       205 ~~v~G~~i~vdgg~~~~  221 (223)
T PRK05884        205 RHITGQTLHVSHGALAH  221 (223)
T ss_pred             hccCCcEEEeCCCeecc
Confidence            99999999999998754

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.7e-38  Score=263.78  Aligned_cols=243  Identities=32%  Similarity=0.486  Sum_probs=204.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCCC---CCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGE---PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++.+.+.+...   ..+.++.+|+++++++.++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 66666665554322   2345678999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  ..+.+.+.+++++++++|+.+++.+++.+++.|.+.+.++|+++||..+..+.+++..|+++|++++
T Consensus        82 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         82 VLVNNAGVGSF--GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             EEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            99999998765  6788889999999999999999999999999998877799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCC--eEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          177 GLNKNVAAELGKYG--IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~g--i~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      .+++.++.|++.++  |++++|+||+++|++...........    ..+. ...+. .+.+++.+|+|+++++++|+++.
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~----~~~~-~~~~~-~~~~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEE----EATR-KLARG-VPLGRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccch----hHHH-HHhcc-CCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999998765  99999999999999875432110000    0011 11222 23377889999999999999998


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++|+.+.+|||.+-
T Consensus       234 ~~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        234 SRFVTGAELVIDGGICA  250 (251)
T ss_pred             ccCccCCEEEECCCeec
Confidence            89999999999999753

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-37  Score=263.51  Aligned_cols=244  Identities=27%  Similarity=0.354  Sum_probs=205.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|++|||||+++||++++++|+++|++|++++|+. +..+...+.+.. ..++.++.+|+++++++.++++.+.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999864 344444444432 3468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC------CceEEEEccccccccCCCCccch
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      |++|||||.......++.+.+.++|++.+++|+.+++.+++++.+.|.+..      .++||++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999998654335678889999999999999999999999999987654      35799999999999888999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|++++.+++.++.++.++|+++++++||.++|++.......          ......+...+.+++.+|+|+++++.+
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~d~a~~i~~  231 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK----------YDALIAKGLVPMPRWGEPEDVARAVAA  231 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh----------HHhhhhhcCCCcCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999875432111          111111222344788999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++...+++|+.+.+|||+..
T Consensus       232 l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        232 LASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             HhCCcccccCCCEEEECCCeec
Confidence            9998888999999999999775

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=8.8e-38  Score=266.75  Aligned_cols=240  Identities=28%  Similarity=0.417  Sum_probs=191.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC--CCCeEEEecCCCCHHHH----HHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG--EPDTFFCHCDVTKEEDV----CSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~----~~~~~~~~~~   91 (280)
                      ++++||||++|||++++++|+++|++|++++|+ ++.+..+.+.+..  ..+..++.+|++|++++    +++++.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999987654 5566665555532  23566789999999866    4556666667


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCH-----------HHHHHHhhhhhHhHHHHHHHHHHhcccC------CCceEEEEc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADL-----------SEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISIC  154 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~is  154 (280)
                      ++++|+||||||....  .++.+.+.           ++|.+++++|+.+++.++++++|.|.+.      ..++|++++
T Consensus        82 ~g~iD~lv~nAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP--TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             cCCceEEEECCccCCC--CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            7899999999998654  34433333           3599999999999999999999998543      246899999


Q ss_pred             cccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCC
Q 023613          155 SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       155 S~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                      |..+..+.+++..|+++|+|+++|+++++.|++++||+|++|+||+++|+...   +...        ...+ ....++.
T Consensus       160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~---~~~~--------~~~~-~~~~~~~  227 (267)
T TIGR02685       160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM---PFEV--------QEDY-RRKVPLG  227 (267)
T ss_pred             hhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc---chhH--------HHHH-HHhCCCC
Confidence            99998888999999999999999999999999999999999999999876321   1110        1111 1112232


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       235 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++.+|+|+++++++|+++...+++|+.+.+|||+.+.
T Consensus       228 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       228 QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            46789999999999999999999999999999998763

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-37  Score=261.42  Aligned_cols=241  Identities=31%  Similarity=0.444  Sum_probs=200.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|++|||||++|||+++++.|+++|++|+++. |+.+..+...+.+.. ..++.++.||+++.+++.++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999988764 565666655555543 3478889999999999999999999988999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC---CceEEEEccccccccCCC-Cccchhh
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLG-PHAYTGS  171 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~-~~~Y~~s  171 (280)
                      |++|||||..... .++.+.+.++|++.+++|+.+++.+++.+++.+..++   .++||++||..+..+.+. +..|+++
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06947         82 DALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS  160 (248)
T ss_pred             CEEEECCccCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence            9999999986532 5677889999999999999999999999999886543   478999999988877664 5789999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++++++.+++++.++||+|+.++||+++|++....- ...        ....... ..+.++..+|+|+++.+++|+
T Consensus       161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-~~~--------~~~~~~~-~~~~~~~~~~e~va~~~~~l~  230 (248)
T PRK06947        161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-QPG--------RAARLGA-QTPLGRAGEADEVAETIVWLL  230 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC-CHH--------HHHHHhh-cCCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999854311 000        0011111 223467889999999999999


Q ss_pred             CCCCCCeeecEEEeCCcc
Q 023613          252 SDEARYISGTNLMVDGGF  269 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~  269 (280)
                      +...++++|+++.+|||.
T Consensus       231 ~~~~~~~~G~~~~~~gg~  248 (248)
T PRK06947        231 SDAASYVTGALLDVGGGR  248 (248)
T ss_pred             CccccCcCCceEeeCCCC
Confidence            998889999999999984

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-37  Score=261.04  Aligned_cols=245  Identities=28%  Similarity=0.420  Sum_probs=206.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||+++||++++++|+++|++|++++|+++..+...+.+.. ..++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999998776666555532 2467788999999999999999999999


Q ss_pred             CCccEEEECCCCCCC-CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|+||||||+... ...++.+.+.+++++.+++|+.+++.++++++++|.+.+.++||++||..+..   +...|+++
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~s  158 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLA  158 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHH
Confidence            999999999998642 12566788999999999999999999999999999877779999999987753   45789999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++++++++...||++++++||.++|++.....+...        ..... +..+ ...+.+|+|+++++++++
T Consensus       159 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~--------~~~~~-~~~~-~~~~~~~~d~a~~~~~~~  228 (250)
T PRK07774        159 KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEF--------VADMV-KGIP-LSRMGTPEDLVGMCLFLL  228 (250)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHH--------HHHHH-hcCC-CCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998765433210        11111 2122 256789999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++.....+|+.+++|||.++
T Consensus       229 ~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        229 SDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             ChhhhCcCCCEEEECCCeec
Confidence            87666789999999999765

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=2.4e-37  Score=259.90  Aligned_cols=239  Identities=31%  Similarity=0.457  Sum_probs=205.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      |++|||||++|||++++++|+++|++|+++.| +++..+...+.... ..++.++.+|+++++++.++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            78999999999999999999999999999888 55555544444332 24688899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||+|...+  ..+.+.+.+++++.+++|+.+++.+++++++.|.+.+.++||++||..+..+.+++..|+++|++++
T Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        81 VLVNNAGITRD--ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            99999998755  6678889999999999999999999999999998877789999999999988899999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  256 (280)
                      .+++.++.++...||+++++.||+++|++.....+..         ...+ ... .+.+++.+|+|+++.+.+|+++...
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---------~~~~-~~~-~~~~~~~~~~~~a~~~~~l~~~~~~  227 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDV---------LNSI-VAQ-IPVGRLGRPEEIAAAVAFLASEEAG  227 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHH---------HHHH-Hhc-CCCCCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999999999999999999865432210         1111 112 2347889999999999999998888


Q ss_pred             CeeecEEEeCCccc
Q 023613          257 YISGTNLMVDGGFT  270 (280)
Q Consensus       257 ~~~G~~i~~dgG~~  270 (280)
                      +++|+.+.+|||..
T Consensus       228 ~~~G~~~~~~gg~~  241 (242)
T TIGR01829       228 YITGATLSINGGLY  241 (242)
T ss_pred             CccCCEEEecCCcc
Confidence            99999999999974

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-38  Score=268.05  Aligned_cols=237  Identities=27%  Similarity=0.344  Sum_probs=195.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.. ..++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            347899999999999999999999999999999999998888777766653 2467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++...|+++
T Consensus        82 g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (275)
T PRK05876         82 GHVDVVFSNAGIVVG--GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVA  159 (275)
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHH
Confidence            999999999998765  7788999999999999999999999999999997665 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+++.+|++.++.|++.+||++++|+||+++|++.............. . .........+....+++|+|+|+.++..+
T Consensus       160 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~dva~~~~~ai  237 (275)
T PRK05876        160 KYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQ-S-STTGSPGPLPLQDDNLGVDDIAQLTADAI  237 (275)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccc-c-ccccccccccccccCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999999864321110000000 0 00000000011245789999999999887


Q ss_pred             CCC
Q 023613          252 SDE  254 (280)
Q Consensus       252 s~~  254 (280)
                      ...
T Consensus       238 ~~~  240 (275)
T PRK05876        238 LAN  240 (275)
T ss_pred             HcC
Confidence            543

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-37  Score=259.36  Aligned_cols=241  Identities=32%  Similarity=0.448  Sum_probs=199.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +|++|||||+++||++++++|+++|++|+++.+ +++..+...+.+.. ..++.++.||+++.+++.++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999988764 44444444444432 2467789999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC---CceEEEEccccccccCCC-Cccchhh
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLG-PHAYTGS  171 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~-~~~Y~~s  171 (280)
                      |++|||||..... .++.+.+.++|++.+++|+.+++.+++++++.|.++.   .|+||++||..+..+.++ +..|+++
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         82 DALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            9999999986532 4677889999999999999999999999999986542   478999999998888776 4689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++++++.++.++.++||++++++||.+.|++........         ....... ..+.+++.+|+|+++++++|+
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~---------~~~~~~~-~~p~~~~~~~~d~a~~~~~l~  230 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPG---------RVDRVKA-GIPMGRGGTAEEVARAILWLL  230 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHH---------HHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999754321110         1111111 223477789999999999999


Q ss_pred             CCCCCCeeecEEEeCCcc
Q 023613          252 SDEARYISGTNLMVDGGF  269 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~  269 (280)
                      +....+++|+++.+|||.
T Consensus       231 ~~~~~~~~g~~~~~~gg~  248 (248)
T PRK06123        231 SDEASYTTGTFIDVSGGR  248 (248)
T ss_pred             CccccCccCCEEeecCCC
Confidence            988889999999999973

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=257.80  Aligned_cols=243  Identities=29%  Similarity=0.466  Sum_probs=205.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||++|||+++|++|+++|++|++. .|+.+..++..+.+.. ..++.++.+|++|++++.++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999998774 6877766666555543 2467889999999999999999998877


Q ss_pred             ------CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           93 ------GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        93 ------~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                            +++|++|||||....  ..+.+.+.+.|++.+++|+.+++.+++.+++.|.+  .+++|++||..+..+.+++.
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~  158 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQ--GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSI  158 (254)
T ss_pred             ccccCCCCccEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCc
Confidence                  479999999998754  67788899999999999999999999999999854  37999999999988889999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|+++|++++.+++.++.++.++|+++++++||+++|++.........        ...+.... ...+++.+++|+|++
T Consensus       159 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~  229 (254)
T PRK12746        159 AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPE--------IRNFATNS-SVFGRIGQVEDIADA  229 (254)
T ss_pred             chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChh--------HHHHHHhc-CCcCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999998765433211        11111122 223788899999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +.+++++...+++|+.+.++||++
T Consensus       230 ~~~l~~~~~~~~~g~~~~i~~~~~  253 (254)
T PRK12746        230 VAFLASSDSRWVTGQIIDVSGGFC  253 (254)
T ss_pred             HHHHcCcccCCcCCCEEEeCCCcc
Confidence            999999877789999999999965

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-37  Score=259.47  Aligned_cols=252  Identities=31%  Similarity=0.397  Sum_probs=209.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..+++|+++||||+++||+.++++|+++|++ |++++|+.+......+.+.. ..++.++.+|+++++++.++++.+.+.
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999 99999987766655555432 346778899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++|||+|....  ..+.+.+.++|++.+++|+.+++.+++++++.|.++. .+++|++||..+..+.++...|++
T Consensus        82 ~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  159 (260)
T PRK06198         82 FGRLDALVNAAGLTDR--GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA  159 (260)
T ss_pred             hCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHH
Confidence            9999999999998754  6677889999999999999999999999999997653 589999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|++++++++.++.|+...||++++++||++.|++............   ..+..... ...+.+++.+++|+++++++|
T Consensus       160 sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l  235 (260)
T PRK06198        160 SKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAP---DDWLEKAA-ATQPFGRLLDPDEVARAVAFL  235 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCC---hHHHHHHh-ccCCccCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999997432110000000   00111111 122347789999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|+.+.+|||.+.
T Consensus       236 ~~~~~~~~~G~~~~~~~~~~~  256 (260)
T PRK06198        236 LSDESGLMTGSVIDFDQSVWG  256 (260)
T ss_pred             cChhhCCccCceEeECCcccc
Confidence            998888999999999999764

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=256.17  Aligned_cols=242  Identities=34%  Similarity=0.506  Sum_probs=205.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~----~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .++++|++|||||+++||+++|+.|+++|++|++++|.    .+..+++.+.+.. ..++.++.+|+++.+++.++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            35778999999999999999999999999999986653    3444444444432 246888999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHH-HhcccCCCceEEEEccccccccCCCCcc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~isS~~~~~~~~~~~~  167 (280)
                      .+.++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++++. +.++++..+++|++||..+..+.+++..
T Consensus        82 ~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  159 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATD--AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVN  159 (249)
T ss_pred             HHHhCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCch
Confidence            9988999999999998765  678889999999999999999999999999 6666666689999999999988899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+.+|++++.+++.++.++++.|+++++++||+++|++.....+.            .+..+. .+.+.+.+++|+++++
T Consensus       160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~------------~~~~~~-~~~~~~~~~~~va~~~  226 (249)
T PRK12827        160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT------------EHLLNP-VPVQRLGEPDEVAALV  226 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH------------HHHHhh-CCCcCCcCHHHHHHHH
Confidence            999999999999999999998999999999999999986554322            111111 1225677999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+++...+++|+++.+|||++
T Consensus       227 ~~l~~~~~~~~~g~~~~~~~g~~  249 (249)
T PRK12827        227 AFLVSDAASYVTGQVIPVDGGFC  249 (249)
T ss_pred             HHHcCcccCCccCcEEEeCCCCC
Confidence            99998888899999999999974

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-36  Score=257.49  Aligned_cols=244  Identities=31%  Similarity=0.460  Sum_probs=207.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+.+.+.+. ..++.++.+|+.+.+++.++++++.++++++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-DARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999999888777766653 346788999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +|||+|....  .++.+.+.++|++.+++|+.+++.+++++++.+.+++.++|+++||..+..+ .+...|+++|++++.
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~  157 (257)
T PRK07074         81 LVANAGAARA--ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH  157 (257)
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence            9999998765  5677889999999999999999999999999998777799999999776543 466799999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCC
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  257 (280)
                      +++.++.++.++||+|++++||+++|++.....+....       +....... .+.++++.++|+++++++|+++...+
T Consensus       158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~d~a~~~~~l~~~~~~~  229 (257)
T PRK07074        158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQ-------VFEELKKW-YPLQDFATPDDVANAVLFLASPAARA  229 (257)
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChH-------HHHHHHhc-CCCCCCCCHHHHHHHHHHHcCchhcC
Confidence            99999999999999999999999999986443222111       11111111 22378899999999999999987889


Q ss_pred             eeecEEEeCCcccccc
Q 023613          258 ISGTNLMVDGGFTSVN  273 (280)
Q Consensus       258 ~~G~~i~~dgG~~~~~  273 (280)
                      ++|+.+.+|||+..++
T Consensus       230 ~~g~~~~~~~g~~~~~  245 (257)
T PRK07074        230 ITGVCLPVDGGLTAGN  245 (257)
T ss_pred             cCCcEEEeCCCcCcCC
Confidence            9999999999987754

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-37  Score=269.48  Aligned_cols=226  Identities=27%  Similarity=0.345  Sum_probs=195.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +..+++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.. ..++.++.+|++|+++++++++.+.+.
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998888777666643 357888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+.+..|+++
T Consensus        83 ~g~iD~lInnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  160 (334)
T PRK07109         83 LGPIDTWVNNAMVTVF--GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAA  160 (334)
T ss_pred             CCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHH
Confidence            9999999999998654  67889999999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCC--CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          172 KHAVLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       172 K~al~~~~~~la~e~~~--~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      |+++++|+++++.|+..  .+|+++.|+||.++|++.......              ......+..++.+|+|+|+++++
T Consensus       161 K~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~--------------~~~~~~~~~~~~~pe~vA~~i~~  226 (334)
T PRK07109        161 KHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR--------------LPVEPQPVPPIYQPEVVADAILY  226 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh--------------ccccccCCCCCCCHHHHHHHHHH
Confidence            99999999999999975  469999999999999975421100              00011122567899999999999


Q ss_pred             hcCCC
Q 023613          250 LASDE  254 (280)
Q Consensus       250 L~s~~  254 (280)
                      +++..
T Consensus       227 ~~~~~  231 (334)
T PRK07109        227 AAEHP  231 (334)
T ss_pred             HHhCC
Confidence            99764

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-36  Score=255.76  Aligned_cols=244  Identities=21%  Similarity=0.267  Sum_probs=200.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ...+|++|||||++|||++++++|+++|++|+++.++ .+..+.+.+.+.. ..++.++.+|++|.+++.++++++.+.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999887664 4455555444432 3467889999999999999999999888


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.+.+.+...+++++++|..+..+.+++..|+++|
T Consensus        86 ~~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK  163 (258)
T PRK09134         86 GPITLLVNNASLFEY--DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSK  163 (258)
T ss_pred             CCCCEEEECCcCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHH
Confidence            999999999998755  677888999999999999999999999999999876778999999988877888888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++... |++++++||++.|+....  + .        .+... .+. .+.++..+++|+|++++++++
T Consensus       164 ~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~--~-~--------~~~~~-~~~-~~~~~~~~~~d~a~~~~~~~~  229 (258)
T PRK09134        164 AALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS--P-E--------DFARQ-HAA-TPLGRGSTPEEIAAAVRYLLD  229 (258)
T ss_pred             HHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC--h-H--------HHHHH-Hhc-CCCCCCcCHHHHHHHHHHHhc
Confidence            99999999999999876 999999999998864211  0 0        01111 111 233678899999999999996


Q ss_pred             CCCCCeeecEEEeCCccccccccc
Q 023613          253 DEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                        ..+++|+.+.+|||....--..
T Consensus       230 --~~~~~g~~~~i~gg~~~~~~~~  251 (258)
T PRK09134        230 --APSVTGQMIAVDGGQHLAWLTP  251 (258)
T ss_pred             --CCCcCCCEEEECCCeecccccc
Confidence              4578999999999986544333

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=254.87  Aligned_cols=239  Identities=30%  Similarity=0.428  Sum_probs=201.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.++++|+++||||+++||+++++.|+++|++|++++|+.+..+++.+..    ...++.+|+++.+++.++++.    .
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~----~   75 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET----GCEPLRLDVGDDAAIRAALAA----A   75 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeEEEecCCCHHHHHHHHHH----h
Confidence            34688999999999999999999999999999999999987766655443    245778999999988777664    4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||....  .+..+.+.++|++.+++|+.+++.+++++++.+.++. .++||++||..+..+.+++..|+++
T Consensus        76 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  153 (245)
T PRK07060         76 GAFDGLVNCAGIASL--ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCAS  153 (245)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHH
Confidence            789999999998754  6677789999999999999999999999999987554 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++.++.++.++||++++++||.+.|++..........       ...+. . ..+.+++.+++|+++++++|+
T Consensus       154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~-------~~~~~-~-~~~~~~~~~~~d~a~~~~~l~  224 (245)
T PRK07060        154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQK-------SGPML-A-AIPLGRFAEVDDVAAPILFLL  224 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHH-------HHHHH-h-cCCCCCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999986543322111       11111 1 123478999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccc
Q 023613          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++...+++|+.+.+|||+.
T Consensus       225 ~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK07060        225 SDAASMVSGVSLPVDGGYT  243 (245)
T ss_pred             CcccCCccCcEEeECCCcc
Confidence            9888899999999999975

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.5e-36  Score=254.38  Aligned_cols=243  Identities=39%  Similarity=0.578  Sum_probs=211.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++.+|++|||||+++||++++++|+++|++|+++ +|+++......+.+.. ..++.++.+|+++++++.++++.+.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999999998 9988777666665543 3468889999999999999999999988


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||++|....  .++.+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+++|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         82 GKIDILVNNAGISNF--GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             CCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence            999999999998744  677888999999999999999999999999999887789999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++..+|+++++++||.++|++.+...+..         ...+..  ..+.+++.+++++++.+++|++
T Consensus       160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~---------~~~~~~--~~~~~~~~~~~~va~~~~~l~~  228 (247)
T PRK05565        160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED---------KEGLAE--EIPLGRLGKPEEIAKVVLFLAS  228 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH---------HHHHHh--cCCCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999876543321         111111  1223678899999999999999


Q ss_pred             CCCCCeeecEEEeCCccc
Q 023613          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +....++|+.+.+|+|+.
T Consensus       229 ~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        229 DDASYITGQIITVDGGWT  246 (247)
T ss_pred             CccCCccCcEEEecCCcc
Confidence            988899999999999964

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-36  Score=254.81  Aligned_cols=242  Identities=32%  Similarity=0.524  Sum_probs=202.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|++||||+++|||+++++.|+++|++|++++|+.++++...+.+.. ..++.++.+|+++.++++++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999998877776666543 35678899999999999999999988888


Q ss_pred             CccEEEECCCCCCCCC------CCC-CCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCC
Q 023613           94 TLDIMVNNAGISGAPC------PDI-READLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~------~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~  165 (280)
                      ++|++|||+|......      ..+ .+.+.++|+..+++|+.+++.+.+.+++.|.+. ..++|+++||.. ..+.+++
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~  160 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ  160 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence            9999999999754310      112 677889999999999999999999999998765 457899998864 5677788


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+++|+++++++++++.++.++||++++++||.++|++.....+..         ...+ .. ..+.+++.+++|+|+
T Consensus       161 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---------~~~~-~~-~~~~~~~~~~~~~a~  229 (253)
T PRK08217        161 TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEA---------LERL-EK-MIPVGRLGEPEEIAH  229 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHH---------HHHH-Hh-cCCcCCCcCHHHHHH
Confidence            999999999999999999999999999999999999999875433211         1111 11 123467889999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++.+|++  ..+++|+++.+|||+.
T Consensus       230 ~~~~l~~--~~~~~g~~~~~~gg~~  252 (253)
T PRK08217        230 TVRFIIE--NDYVTGRVLEIDGGLR  252 (253)
T ss_pred             HHHHHHc--CCCcCCcEEEeCCCcc
Confidence            9999995  3588999999999985

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=2.9e-36  Score=254.57  Aligned_cols=245  Identities=37%  Similarity=0.485  Sum_probs=211.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+......+.+... .++.++.+|+++++++.++++++.++++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999987766666655432 4588899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK  172 (280)
                      ++|++|||+|....  .++.+.+.+++++.++.|+.+++.+++.+++.|.+++.+++|++||..+. .+.++...|+++|
T Consensus        83 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         83 RLDILVANAGIFPL--TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHH
Confidence            99999999998765  66778899999999999999999999999999987778899999999888 7788889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++...|++++.+.||.++|+......+..         +...... ..+.+++++++|+|+++++|++
T Consensus       161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~dva~~~~~l~~  230 (251)
T PRK12826        161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ---------WAEAIAA-AIPLGRLGEPEDIAAAVLFLAS  230 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH---------HHHHHHh-cCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999989999999999999999765443211         0111111 2233678999999999999998


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||.+.
T Consensus       231 ~~~~~~~g~~~~~~~g~~~  249 (251)
T PRK12826        231 DEARYITGQTLPVDGGATL  249 (251)
T ss_pred             ccccCcCCcEEEECCCccC
Confidence            8888899999999999875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.9e-36  Score=287.24  Aligned_cols=255  Identities=34%  Similarity=0.475  Sum_probs=210.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+.++...+.+.   ....+..+.+|+++++++.++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999887776655553   223577889999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccch
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .++++|++|||||....  .++.+.+.++|+..+++|+.+++.+++.+++.|.+++ .++||++||..+..+.++...|+
T Consensus       490 ~~g~iDilV~nAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~  567 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATS--SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYS  567 (676)
T ss_pred             hcCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHH
Confidence            99999999999998654  6778889999999999999999999999999997764 57999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecc--ccccCCCchhhhh-h-hhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG--LALAHLPEEERTE-D-AMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~--~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ++|++++.+++.++.|+.++||+||+|+||.+.|+  ++........... . ........+.. ..+.++.++|+|||+
T Consensus       568 aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~l~r~v~peDVA~  646 (676)
T TIGR02632       568 AAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAK-RTLLKRHIFPADIAE  646 (676)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHh-cCCcCCCcCHHHHHH
Confidence            99999999999999999999999999999999653  3221110000000 0 00011122222 334588999999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++|+++...++||+.+.+|||..-
T Consensus       647 av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       647 AVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHHHhCCcccCCcCcEEEECCCchh
Confidence            99999998888999999999999753

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-36  Score=258.05  Aligned_cols=217  Identities=32%  Similarity=0.452  Sum_probs=193.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||+++++.|+++|++|++++|+++.+++..+.+.   ++.++.||+++++++.++++.+.+.+++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG---LVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999999888777666554   4678899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        79 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  156 (273)
T PRK07825         79 IDVLVNNAGVMPV--GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHA  156 (273)
T ss_pred             CCEEEECCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHH
Confidence            9999999999765  77888999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +.+|++.++.|+.+.||+++.|+||+++|++........                    ....++|+|+|+.++.++...
T Consensus       157 ~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------------------~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        157 VVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGAK--------------------GFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccccc--------------------CCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999865431100                    034679999999999999765


Q ss_pred             CC
Q 023613          255 AR  256 (280)
Q Consensus       255 ~~  256 (280)
                      ..
T Consensus       217 ~~  218 (273)
T PRK07825        217 RP  218 (273)
T ss_pred             CC
Confidence            43

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-36  Score=255.48  Aligned_cols=257  Identities=33%  Similarity=0.498  Sum_probs=211.5

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++.++++|++|||||+++||++++++|+++|++|++++|+.+..+.+.+..... ++.++.+|+++++++.++++++.+.
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA-KVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC-ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            556789999999999999999999999999999999999987777665554422 5688899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|+|||++|..... ......+.++|++.+++|+.+++.+++.+++.+.+.+. ++|+++||..+..+.+++..|+.
T Consensus        84 ~~~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~  162 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPT-GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAA  162 (264)
T ss_pred             hCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHH
Confidence            99999999999987332 66778899999999999999999999999998877655 78999999988888888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +|++++.+++.++.++...+++++++.||+++|++....++....... ....+.....+.. +.+++++++|+|+++++
T Consensus       163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~~~~~  241 (264)
T PRK12829        163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKI-SLGRMVEPEDIAATALF  241 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcC-CCCCCCCHHHHHHHHHH
Confidence            999999999999999988899999999999999986544321100000 0000111111112 23678999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++...+++|+.+.+|||...
T Consensus       242 l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        242 LASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             HcCccccCccCcEEEeCCCccc
Confidence            9987777889999999999864

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=9.4e-38  Score=247.66  Aligned_cols=239  Identities=28%  Similarity=0.389  Sum_probs=198.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH--HhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ--SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++||.+++||+.+|||++++++|+++|..+.++..+.|..+...+  ++++...+.|++||+++..++++.++++.+.
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            36889999999999999999999999999998877776665555433  3445578999999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCccc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      +|.+|++||+||+..          .++|++++++|+.+.++-+..++|+|.++.   +|-||++||..++.|.|....|
T Consensus        81 fg~iDIlINgAGi~~----------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   81 FGTIDILINGAGILD----------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             hCceEEEEccccccc----------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            999999999999963          467999999999999999999999999875   4789999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHH--CCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      ++||+++.+|+|++|...  .+.||++++||||++.|++......+....+ -.+.+...+++.     .-.+|.+++..
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e-~~~~~~~~l~~~-----~~q~~~~~a~~  224 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLE-YSDSIKEALERA-----PKQSPACCAIN  224 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCccc-ccHHHHHHHHHc-----ccCCHHHHHHH
Confidence            999999999999998865  3569999999999999999776533221111 112233333332     23588999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCcccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++.++..   ..+|+.+.+|.|..+
T Consensus       225 ~v~aiE~---~~NGaiw~v~~g~l~  246 (261)
T KOG4169|consen  225 IVNAIEY---PKNGAIWKVDSGSLE  246 (261)
T ss_pred             HHHHHhh---ccCCcEEEEecCcEE
Confidence            9999854   679999999999743

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=9.5e-36  Score=250.74  Aligned_cols=245  Identities=36%  Similarity=0.531  Sum_probs=207.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|++||||++++||++++++|+++|++|+++.|+.+ ..+...+.+.. ..++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999988777654 34444444432 3578888999999999999999999988


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||++|....  ....+.+.+++++.+++|+.+++.+.+++++.+.+.+.++++++||..+..+.++...|+++|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk  159 (248)
T PRK05557         82 GGVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASK  159 (248)
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHH
Confidence            999999999998765  666778899999999999999999999999999877778999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++...|++++.++||+++|++.....+.          +........ +.+++.+++|+++++.+|++
T Consensus       160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~va~~~~~l~~  228 (248)
T PRK05557        160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPED----------VKEAILAQI-PLGRLGQPEEIASAVAFLAS  228 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChH----------HHHHHHhcC-CCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999886543211          111111122 23678899999999999998


Q ss_pred             CCCCCeeecEEEeCCccccc
Q 023613          253 DEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +...+++|+.+.+|||++++
T Consensus       229 ~~~~~~~g~~~~i~~~~~~~  248 (248)
T PRK05557        229 DEAAYITGQTLHVNGGMVMG  248 (248)
T ss_pred             cccCCccccEEEecCCccCC
Confidence            87789999999999998763

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.3e-36  Score=257.09  Aligned_cols=229  Identities=24%  Similarity=0.294  Sum_probs=189.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.++...+     ..+.++.+|+++.++++++++++.+.++++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-----LGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999999877655432     2467889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||+...  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+....|+++|++++
T Consensus        77 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  154 (273)
T PRK06182         77 VLVNNAGYGSY--GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE  154 (273)
T ss_pred             EEEECCCcCCC--CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence            99999998755  7788999999999999999999999999999998887799999999988888888889999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc------hhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE------EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+++++.|+.++||++++|+||+++|++.......      ................. ....+++.+|+|+|++++++
T Consensus       155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vA~~i~~~  233 (273)
T PRK06182        155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRS-TYGSGRLSDPSVIADAISKA  233 (273)
T ss_pred             HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHH-hhccccCCCHHHHHHHHHHH
Confidence            999999999999999999999999999985321100      00000000001011111 12337889999999999999


Q ss_pred             cCC
Q 023613          251 ASD  253 (280)
Q Consensus       251 ~s~  253 (280)
                      ++.
T Consensus       234 ~~~  236 (273)
T PRK06182        234 VTA  236 (273)
T ss_pred             HhC
Confidence            975

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-36  Score=251.30  Aligned_cols=237  Identities=30%  Similarity=0.407  Sum_probs=205.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +..+++|++|||||+++||++++++|+++|++|++++|+.+...+..+.+.. ....++.+|+.+.+++.++++++.+++
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-DALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-cCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3457899999999999999999999999999999999988766655554432 235667899999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||++|....  ..+.+.+.+++++.+++|+.+++.+++++++.+.+++.+++|++||..+..+.+++..|+++|
T Consensus        81 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (239)
T PRK12828         81 GRLDALVNIAGAFVW--GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAK  158 (239)
T ss_pred             CCcCEEEECCcccCc--CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHH
Confidence            999999999998654  567778999999999999999999999999999877789999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++...|++++.+.||++.|++.....+...                   ...+++++|+|++++++++
T Consensus       159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~~-------------------~~~~~~~~dva~~~~~~l~  219 (239)
T PRK12828        159 AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDAD-------------------FSRWVTPEQIAAVIAFLLS  219 (239)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCchh-------------------hhcCCCHHHHHHHHHHHhC
Confidence            999999999999998889999999999999996443322110                   1457899999999999998


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||++.
T Consensus       220 ~~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        220 DEAQAITGASIPVDGGVAL  238 (239)
T ss_pred             cccccccceEEEecCCEeC
Confidence            8777899999999999864

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.4e-36  Score=251.78  Aligned_cols=248  Identities=25%  Similarity=0.323  Sum_probs=203.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++++|++|||||+++||++++++|+++|++|++..|+ .+......+.+.. ..++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            45779999999999999999999999999998877654 3434333333332 246778899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||....  .++.+.+.+.+++.+++|+.+.+.+++++.+.|.+  .+++|++||..+..+.+++..|+++
T Consensus        82 ~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  157 (252)
T PRK06077         82 YGVADILVNNAGLGLF--SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAM  157 (252)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHH
Confidence            9999999999998655  66778889999999999999999999999999865  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++++++.+++++++ +++++.+.||+++|++...........      ...+.. .....+++++|+|+|+++++++
T Consensus       158 K~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~dva~~~~~~~  229 (252)
T PRK06077        158 KAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMS------EKEFAE-KFTLMGKILDPEEVAEFVAAIL  229 (252)
T ss_pred             HHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhccccc------HHHHHH-hcCcCCCCCCHHHHHHHHHHHh
Confidence            99999999999999988 899999999999999854322211100      011111 1223367899999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +.  ..++|+.+.+|+|....+++
T Consensus       230 ~~--~~~~g~~~~i~~g~~~~~~~  251 (252)
T PRK06077        230 KI--ESITGQVFVLDSGESLKGGI  251 (252)
T ss_pred             Cc--cccCCCeEEecCCeeccCCC
Confidence            63  46799999999999998875

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.3e-36  Score=273.74  Aligned_cols=240  Identities=28%  Similarity=0.375  Sum_probs=204.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++|++|||||++|||++++++|+++|++|+++++..  +.+++..+.+.    ..++.+|+++.++++++++.+.+.+
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~----~~~~~~Dv~~~~~~~~~~~~~~~~~  282 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG----GTALALDITAPDAPARIAEHLAERH  282 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC----CeEEEEeCCCHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999998853  33344433332    3467899999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  ..+.+.+.++|++.+++|+.+++.+.+.+.+.+..+..++||++||..+..+.+++..|+++|
T Consensus       283 g~id~vi~~AG~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asK  360 (450)
T PRK08261        283 GGLDIVVHNAGITRD--KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASK  360 (450)
T ss_pred             CCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHH
Confidence            999999999998865  778899999999999999999999999999965555679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++++|++.++.++.++||++|+|+||+++|++.... +..         ......+.. ...+...|+|+|++++||++
T Consensus       361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~-~~~---------~~~~~~~~~-~l~~~~~p~dva~~~~~l~s  429 (450)
T PRK08261        361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI-PFA---------TREAGRRMN-SLQQGGLPVDVAETIAWLAS  429 (450)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc-chh---------HHHHHhhcC-CcCCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999986542 211         011111112 23667899999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...++||+++.+|||...
T Consensus       430 ~~~~~itG~~i~v~g~~~~  448 (450)
T PRK08261        430 PASGGVTGNVVRVCGQSLL  448 (450)
T ss_pred             hhhcCCCCCEEEECCCccc
Confidence            9999999999999998765

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-36  Score=250.76  Aligned_cols=232  Identities=29%  Similarity=0.410  Sum_probs=196.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+|++|||||+++||++++++|+++|++|++++|+.+..      .    ...++.+|+++.++++++++++.+.+ ++|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d   70 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F----PGELFACDLADIEQTAATLAQINEIH-PVD   70 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c----CceEEEeeCCCHHHHHHHHHHHHHhC-CCc
Confidence            579999999999999999999999999999999987531      0    12467899999999999999998875 689


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.++|.|.+.+.++||++||.. ..+.++...|+++|++++
T Consensus        71 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~  147 (234)
T PRK07577         71 AIVNNVGIALP--QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALV  147 (234)
T ss_pred             EEEECCCCCCC--CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHH
Confidence            99999998765  677788999999999999999999999999999877778999999985 456778899999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  256 (280)
                      ++++.++.|++++||++++|+||.++|++.....+.....      ... ..+. .+.++..+|+|+|+++++|+++...
T Consensus       148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~------~~~-~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~  219 (234)
T PRK07577        148 GCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEE------EKR-VLAS-IPMRRLGTPEEVAAAIAFLLSDDAG  219 (234)
T ss_pred             HHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhH------HHH-Hhhc-CCCCCCcCHHHHHHHHHHHhCcccC
Confidence            9999999999999999999999999999876543221111      011 1111 2236778999999999999998888


Q ss_pred             CeeecEEEeCCccc
Q 023613          257 YISGTNLMVDGGFT  270 (280)
Q Consensus       257 ~~~G~~i~~dgG~~  270 (280)
                      +++|+.+.+|||..
T Consensus       220 ~~~g~~~~~~g~~~  233 (234)
T PRK07577        220 FITGQVLGVDGGGS  233 (234)
T ss_pred             CccceEEEecCCcc
Confidence            99999999999854

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=4.9e-36  Score=261.01  Aligned_cols=238  Identities=20%  Similarity=0.198  Sum_probs=194.4

Q ss_pred             EEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           22 LITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        22 lItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      |||||++|||++++++|+++| ++|++++|+.+..++..+.+.. ..++.++.+|+++.++++++++++.+.++++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999998887777766643 24677889999999999999999998888999999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--CceEEEEcccccccc----------------
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIG----------------  161 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~----------------  161 (280)
                      ||||+.... .+..+.+.++|++++++|+.+++.+++.++|.|.+.+  .|+||++||..+..+                
T Consensus        81 nnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         81 CNAAVYLPT-AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             ECCCcCCCC-CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999986431 3566789999999999999999999999999998765  589999999876421                


Q ss_pred             -------------------CCCCccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCee-eccccccCCCchhhhhhhh
Q 023613          162 -------------------GLGPHAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAV-ATGLALAHLPEEERTEDAM  220 (280)
Q Consensus       162 -------------------~~~~~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v-~T~~~~~~~~~~~~~~~~~  220 (280)
                                         .+++..|++||+|...+++.+++++.. +||+|++|+||+| .|++.+...+..   ..  
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~---~~--  234 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLF---RL--  234 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHH---HH--
Confidence                               124567999999988889999999975 6999999999999 789875533211   00  


Q ss_pred             hhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          221 VGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                        ......+  .+.+++.+|++.|+.+++|+++...+.+|+++..||+.
T Consensus       235 --~~~~~~~--~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        235 --LFPPFQK--YITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             --HHHHHHH--HHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence              0000011  11256789999999999999987778899999998874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=249.46  Aligned_cols=234  Identities=24%  Similarity=0.391  Sum_probs=202.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCC--CHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVT--KEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~--~~~~~~~~~~~~~~   90 (280)
                      .+++|++|||||+++||.+++++|++.|++|++++|+.+..+...+++...  .++.++.+|+.  +++++.++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988777666655432  35566667765  88999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||..... .++.+.+.++|++.+++|+.+.+.++++++++|.+.+.++|+++||..+..+.+++..|++
T Consensus        89 ~~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  167 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV  167 (247)
T ss_pred             HhCCCCEEEECCcccCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHH
Confidence            999999999999986442 5677888999999999999999999999999998887899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|++++.+++.++.++...||++++++||.++|++....++...                  . .++.+|+|+++.++++
T Consensus       168 sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~  228 (247)
T PRK08945        168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGED------------------P-QKLKTPEDIMPLYLYL  228 (247)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCccc------------------c-cCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999997654433211                  0 4578999999999999


Q ss_pred             cCCCCCCeeecEEEeCCc
Q 023613          251 ASDEARYISGTNLMVDGG  268 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG  268 (280)
                      +++..++++|+++...-|
T Consensus       229 ~~~~~~~~~g~~~~~~~~  246 (247)
T PRK08945        229 MGDDSRRKNGQSFDAQPG  246 (247)
T ss_pred             hCccccccCCeEEeCCCC
Confidence            999899999999876543

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=254.23  Aligned_cols=247  Identities=23%  Similarity=0.303  Sum_probs=204.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      |+++||||++|||+++|++|+++|++|++++|+.+.+++..+.+...  ..+.++.+|+++++++.++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999988777666655422  2345678999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||+|....  .++.+.+.++|++.+++|+.+++.++++++|.|.+. ..++||++||..+..+.+++..|+++|+++
T Consensus        81 ~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  158 (272)
T PRK07832         81 VVMNIAGISAW--GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGL  158 (272)
T ss_pred             EEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHH
Confidence            99999998654  678899999999999999999999999999999764 358999999999888888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      .+|++.++.|+..+||+|++|+||.++|++.............  .....+...   ..++..+|+|+|+.+++++. ..
T Consensus       159 ~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~vA~~~~~~~~-~~  232 (272)
T PRK07832        159 RGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRED--PRVQKWVDR---FRGHAVTPEKAAEKILAGVE-KN  232 (272)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcch--hhHHHHHHh---cccCCCCHHHHHHHHHHHHh-cC
Confidence            9999999999999999999999999999986653211100000  001111111   12567899999999999995 45


Q ss_pred             CCeeecEEEeCCcccccc
Q 023613          256 RYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~~~  273 (280)
                      +++++..+.+++|++...
T Consensus       233 ~~~~~~~~~~~~~~~~~~  250 (272)
T PRK07832        233 RYLVYTSPDIRALYWFKR  250 (272)
T ss_pred             CeEEecCcchHHHHHHHh
Confidence            789999999999987755

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-35  Score=252.25  Aligned_cols=234  Identities=25%  Similarity=0.306  Sum_probs=192.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+|++|||||+||||++++++|+++|++|++++|+.+.++.+.+...  .++.++.+|+++++++.++++.+.+.++++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHP--DRALARLLDVTDFDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcC--CCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999999999999877665544322  3577889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.+++..|+++|++++
T Consensus        81 ~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~  158 (277)
T PRK06180         81 VLVNNAGYGHE--GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE  158 (277)
T ss_pred             EEEECCCccCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            99999998754  6788899999999999999999999999999998877789999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhh-hhHHHHHh-hhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM-VGFRNFVA-RNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      .+++.++.++..+|+++++++||.++|++............... ..+..... .......++.+|+|+|+++++++...
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999997543322110000000 00111100 01122356789999999999998754

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-35  Score=252.18  Aligned_cols=243  Identities=26%  Similarity=0.291  Sum_probs=198.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.++.+.+...  ..+.++.+|+++++++.++++.+.+.++++|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG--DRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc--CCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999999887766655443  3577889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.+++|++||..+..+.++...|+++|++++
T Consensus        80 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~  157 (275)
T PRK08263         80 IVVNNAGYGLF--GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE  157 (275)
T ss_pred             EEEECCCCccc--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence            99999998755  7788999999999999999999999999999998877789999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCC-CCHHHHHHHHHHhcCCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-LTANDVANAVLFLASDEA  255 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~~~~L~s~~~  255 (280)
                      .+++.++.+++++||+++.++||+++|++............. ......... .....+++ ++|+|+|++++++++.. 
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~p~dva~~~~~l~~~~-  234 (275)
T PRK08263        158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDA-YDTLREELA-EQWSERSVDGDPEAAAEALLKLVDAE-  234 (275)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchh-hhhHHHHHH-HHHHhccCCCCHHHHHHHHHHHHcCC-
Confidence            999999999999999999999999999987532211100000 000000111 11122566 89999999999999754 


Q ss_pred             CCeeecEEEeCC
Q 023613          256 RYISGTNLMVDG  267 (280)
Q Consensus       256 ~~~~G~~i~~dg  267 (280)
                       ...++.+...+
T Consensus       235 -~~~~~~~~~~~  245 (275)
T PRK08263        235 -NPPLRLFLGSG  245 (275)
T ss_pred             -CCCeEEEeCch
Confidence             33556555444

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-35  Score=247.61  Aligned_cols=228  Identities=26%  Similarity=0.304  Sum_probs=196.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ++|++|||||+++||++++++|+++|++|++++|+.+..+.+.+.+.. ..++.++.+|+++.+++.++++.+.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999998777666655543 2468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||+|....  .++.+.+.+++++.+++|+.+++.+++.++++|.+++.++||++||..+..+.+++..|+++|+++
T Consensus        85 d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  162 (241)
T PRK07454         85 DVLINNAGMAYT--GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAAL  162 (241)
T ss_pred             CEEEECCCccCC--CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHH
Confidence            999999998754  677888999999999999999999999999999877779999999999988888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      +.+++.++.+++++|+++++|.||+++|++........           .+      ......+++|+|+++++|++++.
T Consensus       163 ~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~-----------~~------~~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQA-----------DF------DRSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCcccCCccccccccc-----------cc------ccccCCCHHHHHHHHHHHHcCCc
Confidence            99999999999999999999999999999854321100           00      01356899999999999999776


Q ss_pred             CCeeecEE
Q 023613          256 RYISGTNL  263 (280)
Q Consensus       256 ~~~~G~~i  263 (280)
                      ..+.++.-
T Consensus       226 ~~~~~~~~  233 (241)
T PRK07454        226 SAVIEDLT  233 (241)
T ss_pred             cceeeeEE
Confidence            66655443

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-35  Score=249.74  Aligned_cols=216  Identities=24%  Similarity=0.309  Sum_probs=187.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++|||||++|||+++++.|+++|++|++++|+.+.+++..+.+....++.++.+|+++++++.++++++.++++++|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            57899999999999999999999999999999998888777666643337888999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +|||+|..... ....+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+....|+++|++++.
T Consensus        82 lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         82 VIANAGISVGT-LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEECCCcCCCc-cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            99999986431 22334788999999999999999999999999988878999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      +++.++.|+..+||++++++||+++|++.......                     ...+.+|+++++.++..+....
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---------------------~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYP---------------------MPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCC---------------------CCCccCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999975431100                     0234689999999999997644

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.1e-35  Score=259.68  Aligned_cols=214  Identities=22%  Similarity=0.262  Sum_probs=177.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..||+++||||++|||+++|++|+++|++|++++|+++.++++.+++..   ..++..+.+|+++  ++.+.++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            3699999999999999999999999999999999999988887776643   2467778899985  2333344444444


Q ss_pred             C--CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-c-CCCCccc
Q 023613           93 G--TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-G-GLGPHAY  168 (280)
Q Consensus        93 ~--~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~-~~~~~~Y  168 (280)
                      +  ++|++|||||+.......+.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+.. + .|....|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence            4  4669999999875322467889999999999999999999999999999888889999999998864 3 5788999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++||+++++|+++++.|++++||+|++|+||+++|++......                    .  -...+|+++|+.++
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~~--------------------~--~~~~~p~~~A~~~~  266 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRS--------------------S--FLVPSSDGYARAAL  266 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccCC--------------------C--CCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998642100                    0  01358999999999


Q ss_pred             HhcCC
Q 023613          249 FLASD  253 (280)
Q Consensus       249 ~L~s~  253 (280)
                      ..+..
T Consensus       267 ~~~~~  271 (320)
T PLN02780        267 RWVGY  271 (320)
T ss_pred             HHhCC
Confidence            88853

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.6e-35  Score=279.77  Aligned_cols=254  Identities=36%  Similarity=0.505  Sum_probs=215.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .++||++|||||+||||++++++|+++|++|++++|+.+.++...+.+....++.++.+|+++++++.++++++.+.+++
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999999888777766654357888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++.+++.|.+++. |+||++||..+..+.++...|+++|+
T Consensus       499 iDvvI~~AG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKa  576 (681)
T PRK08324        499 VDIVVSNAGIAIS--GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKA  576 (681)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHH
Confidence            9999999998765  77888999999999999999999999999999987664 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCee--eccccccCCCchhhhhh--hhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAV--ATGLALAHLPEEERTED--AMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v--~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +++.+++.++.+++++||++|+|+||.+  .|++.............  .......++.+ ..+.+++++++|+|+++++
T Consensus       577 a~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l~~~v~~~DvA~a~~~  655 (681)
T PRK08324        577 AELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRA-RNLLKREVTPEDVAEAVVF  655 (681)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHh-cCCcCCccCHHHHHHHHHH
Confidence            9999999999999999999999999999  88765432211100000  00011122222 3344789999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++....++|+.+.+|||...
T Consensus       656 l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        656 LASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HhCccccCCcCCEEEECCCchh
Confidence            9987778899999999999764

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=2e-35  Score=258.03  Aligned_cols=241  Identities=20%  Similarity=0.204  Sum_probs=191.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+.+.   .+.++.+|++|.++++++++++.+.++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~---~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID---GVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---hCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            35789999999999999999999999999999999999887776665553   367889999999999999999999889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc------------c
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI------------G  161 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~------------~  161 (280)
                      ++|++|||||+...    ....+.++|+..+++|+.+++.++++++|.|.+.+.++||++||.....            +
T Consensus        99 ~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~  174 (315)
T PRK06196         99 RIDILINNAGVMAC----PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG  174 (315)
T ss_pred             CCCEEEECCCCCCC----CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence            99999999998643    2345678899999999999999999999999877778999999976532            2


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh-ccCCCCCCCH
Q 023613          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-ANMQGTELTA  240 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  240 (280)
                      .+++..|++||++++.+++.++.+++++||++++|+||++.|++.+...... ...      ..+.... .++..++.+|
T Consensus       175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~  247 (315)
T PRK06196        175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE-QVA------LGWVDEHGNPIDPGFKTP  247 (315)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh-hhh------hhhhhhhhhhhhhhcCCH
Confidence            3345689999999999999999999999999999999999999865432211 100      0011110 1111256799


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      +|+|..+++|++.......|..+..|.+
T Consensus       248 ~~~a~~~~~l~~~~~~~~~~g~~~~~~~  275 (315)
T PRK06196        248 AQGAATQVWAATSPQLAGMGGLYCEDCD  275 (315)
T ss_pred             hHHHHHHHHHhcCCccCCCCCeEeCCCc
Confidence            9999999999976554455666655654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=2.6e-35  Score=246.76  Aligned_cols=222  Identities=23%  Similarity=0.234  Sum_probs=183.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      |+++||||++|||+++|++|+++|  ..|++..|+....      . ...++.+++||+++.++++++.    ++++++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~-~~~~~~~~~~Dls~~~~~~~~~----~~~~~id   69 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F-QHDNVQWHALDVTDEAEIKQLS----EQFTQLD   69 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c-ccCceEEEEecCCCHHHHHHHH----HhcCCCC
Confidence            479999999999999999999985  5566666654321      1 1246788999999999987754    4568999


Q ss_pred             EEEECCCCCCC----CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc---cCCCCccch
Q 023613           97 IMVNNAGISGA----PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---GGLGPHAYT  169 (280)
Q Consensus        97 ~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---~~~~~~~Y~  169 (280)
                      ++|||||....    +...+.+.+.+.|++.+++|+.+++.+++.++|.|.+.+.++++++||..+..   +.+++..|+
T Consensus        70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~  149 (235)
T PRK09009         70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYR  149 (235)
T ss_pred             EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhh
Confidence            99999998753    12457788999999999999999999999999999877778999998865532   345678999


Q ss_pred             hhHHHHHHHHHHHHHHHCC--CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~--~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      ++|+++++|++.++.|+.+  ++|+|++|+||+++|++......                   ..+.+++.+|+|+|+.+
T Consensus       150 asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------------------~~~~~~~~~~~~~a~~~  210 (235)
T PRK09009        150 ASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ-------------------NVPKGKLFTPEYVAQCL  210 (235)
T ss_pred             hhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh-------------------ccccCCCCCHHHHHHHH
Confidence            9999999999999999987  68999999999999998643211                   01126678999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++++++...+++|+.+.+|||+.
T Consensus       211 ~~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        211 LGIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHHHcCChhhCCcEEeeCCcCC
Confidence            99999988899999999999985

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-35  Score=253.81  Aligned_cols=220  Identities=23%  Similarity=0.315  Sum_probs=187.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ...+++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.+.. ..++.++.+|++|.+++.++++.+.+.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999998887777666542 346778999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCC--CHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREA--DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAY  168 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~~~Y  168 (280)
                      ++++|++|||||+...  .++.+.  +++++++.+++|+.+++.++++++|+|.+.+.++||++||..+.. +.++...|
T Consensus       115 ~g~id~li~~AG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y  192 (293)
T PRK05866        115 IGGVDILINNAGRSIR--RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVY  192 (293)
T ss_pred             cCCCCEEEECCCCCCC--cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchH
Confidence            9999999999998754  444432  468899999999999999999999999888889999999976654 36778899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|+|+++|++.++.|++++||++++++||+++|++........                  .  ....+|+++|+.++
T Consensus       193 ~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~~------------------~--~~~~~pe~vA~~~~  252 (293)
T PRK05866        193 NASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAYD------------------G--LPALTADEAAEWMV  252 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccccc------------------C--CCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999864321100                  0  12469999999999


Q ss_pred             HhcCCC
Q 023613          249 FLASDE  254 (280)
Q Consensus       249 ~L~s~~  254 (280)
                      ..+...
T Consensus       253 ~~~~~~  258 (293)
T PRK05866        253 TAARTR  258 (293)
T ss_pred             HHHhcC
Confidence            988643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=9.9e-35  Score=244.25  Aligned_cols=244  Identities=34%  Similarity=0.514  Sum_probs=209.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++.+|++|||||+++||++++++|+++|++|++++|+++..+...+.+.. ..++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45689999999999999999999999999999999998877766665543 35688889999999999999999998889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++||++|....  .+..+.+.+++++.++.|+.+++.+++++.++|.+.+.++||++||..+..+.+++..|+.+|+
T Consensus        82 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  159 (246)
T PRK05653         82 ALDILVNNAGITRD--ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKA  159 (246)
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHH
Confidence            99999999998655  6677889999999999999999999999999997777789999999988888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.+++.+++++...|+++++++||.+.+++.......   .      ...+ .. ..+.+.+++++|+++++++++++
T Consensus       160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~---~------~~~~-~~-~~~~~~~~~~~dva~~~~~~~~~  228 (246)
T PRK05653        160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEE---V------KAEI-LK-EIPLGRLGQPEEVANAVAFLASD  228 (246)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHH---H------HHHH-Hh-cCCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999998899999999999999976431110   0      0111 11 12236789999999999999998


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||+.+
T Consensus       229 ~~~~~~g~~~~~~gg~~~  246 (246)
T PRK05653        229 AASYITGQVIPVNGGMYM  246 (246)
T ss_pred             hhcCccCCEEEeCCCeeC
Confidence            888999999999999853

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-35  Score=251.95  Aligned_cols=253  Identities=23%  Similarity=0.295  Sum_probs=203.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++|++|||||+++||+++++.|+++|++|++++|+.+..+...+.+..   ..++.++.+|++|++++++ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            578999999999999999999999999999999998777666554432   2468889999999999999 999988889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||...+  ..+.+.+.+++++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.+++..|+++|+
T Consensus        81 ~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  158 (280)
T PRK06914         81 RIDLLVNNAGYANG--GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKY  158 (280)
T ss_pred             CeeEEEECCccccc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHH
Confidence            99999999998765  6677889999999999999999999999999998777789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhh---hhhh-hhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERT---EDAM-VGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +++.++++++.+++++||+++.++||.++|++.....+.....   .... ...............++.+|+|+|+++++
T Consensus       159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  238 (280)
T PRK06914        159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVE  238 (280)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence            9999999999999999999999999999999865432211000   0000 00111111111123578899999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +++.....   ..+.++.|.......
T Consensus       239 ~~~~~~~~---~~~~~~~~~~~~~~~  261 (280)
T PRK06914        239 IAESKRPK---LRYPIGKGVKLMILA  261 (280)
T ss_pred             HHcCCCCC---cccccCCchHHHHHH
Confidence            99865432   467777666654433

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-35  Score=250.21  Aligned_cols=231  Identities=21%  Similarity=0.250  Sum_probs=188.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   95 (280)
                      .+|++|||||++|||+++|+.|+++|++|++++|+.+.++.+.+     ..+.++.+|++|.++++++++.+.+.+ +++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-----EGLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----CCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            37899999999999999999999999999999999887665543     246678999999999999999997766 689


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||....  ..+.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|+++
T Consensus        78 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  155 (277)
T PRK05993         78 DALFNNGAYGQP--GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAI  155 (277)
T ss_pred             cEEEECCCcCCC--CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHH
Confidence            999999998765  778889999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchh-------hhhhhh--hhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE-------RTEDAM--VGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      ++|+++++.|++++||+|++|+||+++|++.....+...       ......  ...... ...........+|+++|+.
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~va~~  234 (277)
T PRK05993        156 EGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARL-EGGGSKSRFKLGPEAVYAV  234 (277)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHH-HhhhhccccCCCHHHHHHH
Confidence            999999999999999999999999999998664322100       000000  000000 0101111235789999999


Q ss_pred             HHHhcCCCC
Q 023613          247 VLFLASDEA  255 (280)
Q Consensus       247 ~~~L~s~~~  255 (280)
                      ++..+....
T Consensus       235 i~~a~~~~~  243 (277)
T PRK05993        235 LLHALTAPR  243 (277)
T ss_pred             HHHHHcCCC
Confidence            999986543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=8e-35  Score=246.40  Aligned_cols=251  Identities=31%  Similarity=0.486  Sum_probs=207.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+.+.+.+.. ..++.++.+|+++.+++.++++.+.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            57899999999999999999999999999999998877777665543 24688899999999999999999999889999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||+|....  ....+.+.+++++++++|+.+++.+++++++.|.+.+.+++|++||..+..+.+.+..|+.+|++++
T Consensus        81 ~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~  158 (255)
T TIGR01963        81 ILVNNAGIQHV--APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLI  158 (255)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHH
Confidence            99999998754  5667788999999999999999999999999998777789999999988888889999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhh--hhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA--MVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      .+++.++.++...+++++.++||.+.|++....++........  .......... ....+.+++++|+|+++++++++.
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~~~~~~~~~~  237 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLP-GQPTKRFVTVDEVAETALFLASDA  237 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHc-cCccccCcCHHHHHHHHHHHcCcc
Confidence            9999999999888999999999999999754432211100000  0000011111 112356899999999999999876


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ...++|+.+.+|||+..
T Consensus       238 ~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       238 AAGITGQAIVLDGGWTA  254 (255)
T ss_pred             ccCccceEEEEcCcccc
Confidence            67889999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-34  Score=244.47  Aligned_cols=240  Identities=28%  Similarity=0.410  Sum_probs=198.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      |++|||||+++||++++++|+++|++|++ ..|+.+..++....+.. ..++.++.+|++|+++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999876 46766665555554432 24577899999999999999999999899999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC---CceEEEEccccccccCCC-CccchhhH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLG-PHAYTGSK  172 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~-~~~Y~~sK  172 (280)
                      ++|||+|..... .++.+.+.++|+..+++|+.+++.+++.+++.+.++.   .++||++||..+..+.++ +..|+++|
T Consensus        82 ~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         82 ALVNNAGILFTQ-CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             EEEECCCCCCCC-CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            999999986432 5677889999999999999999999999999987653   478999999988888775 46899999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++.++|+++++++||.++|++....... ..       ... ..... +.++..+++|+|++++++++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~-~~-------~~~-~~~~~-~~~~~~~~~dva~~~~~~~~  230 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEP-GR-------VDR-VKSNI-PMQRGGQPEEVAQAIVWLLS  230 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCH-HH-------HHH-HHhcC-CCCCCcCHHHHHHHHHhhcC
Confidence            9999999999999999999999999999999975432111 00       111 11112 23567799999999999999


Q ss_pred             CCCCCeeecEEEeCCcc
Q 023613          253 DEARYISGTNLMVDGGF  269 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~  269 (280)
                      +...+++|+++.+|||.
T Consensus       231 ~~~~~~~g~~~~~~g~~  247 (247)
T PRK09730        231 DKASYVTGSFIDLAGGK  247 (247)
T ss_pred             hhhcCccCcEEecCCCC
Confidence            88889999999999983

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-35  Score=247.58  Aligned_cols=240  Identities=19%  Similarity=0.242  Sum_probs=193.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC--c
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT--L   95 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~--~   95 (280)
                      |++|||||++|||+++++.|+++|++|++++|++ +.++.+.+..  ..++.++.+|++++++++++++++.+.++.  +
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY--NSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc--CCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            6899999999999999999999999999999986 4444333322  246778899999999999999998876643  2


Q ss_pred             --cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhH
Q 023613           96 --DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        96 --d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                        +++|||+|...+. .++.+.+.++|++.+++|+.+++.+++.++|+|.+.+ .++||++||..+..+.+++..|+++|
T Consensus        80 ~~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (251)
T PRK06924         80 SSIHLINNAGMVAPI-KPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK  158 (251)
T ss_pred             CceEEEEcceecccC-cccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence              2899999986443 5788899999999999999999999999999997753 57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHC--CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          173 HAVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~--~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ++++++++.++.|++  .+||+|++|.||+++|++.............   ....+.. . .+.+++.+|+|+|+.+++|
T Consensus       159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~---~~~~~~~-~-~~~~~~~~~~dva~~~~~l  233 (251)
T PRK06924        159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFT---NLDRFIT-L-KEEGKLLSPEYVAKALRNL  233 (251)
T ss_pred             HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccch---HHHHHHH-H-hhcCCcCCHHHHHHHHHHH
Confidence            999999999999985  4689999999999999986532211100000   0111111 1 1237889999999999999


Q ss_pred             cCCCCCCeeecEEEeCC
Q 023613          251 ASDEARYISGTNLMVDG  267 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dg  267 (280)
                      +++. .+++|+.+.+|+
T Consensus       234 ~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        234 LETE-DFPNGEVIDIDE  249 (251)
T ss_pred             Hhcc-cCCCCCEeehhh
Confidence            9874 789999998875

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-34  Score=243.16  Aligned_cols=243  Identities=35%  Similarity=0.548  Sum_probs=205.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++.|++|||||+++||++++++|+++|++|++..|+. +..+...+.+.. ..++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999987766654 333444333332 3467889999999999999999999888


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||++|....  ..+.+.+.+++++.+++|+.+++.+.+.+++++.+.+.+++|++||..+..+.+++..|+.+|
T Consensus        83 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK  160 (249)
T PRK12825         83 GRIDILVNNAGIFED--KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAK  160 (249)
T ss_pred             CCCCEEEECCccCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHH
Confidence            999999999997654  667788999999999999999999999999999877778999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++++++.+++++..+|++++.++||.+.|++...........           .....+.+++++++|+++++.++++
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~dva~~~~~~~~  229 (249)
T PRK12825        161 AGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREA-----------KDAETPLGRSGTPEDIARAVAFLCS  229 (249)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHh-----------hhccCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999989999999999999999866543321110           0001234678999999999999998


Q ss_pred             CCCCCeeecEEEeCCccc
Q 023613          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+++.++||..
T Consensus       230 ~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        230 DASDYITGQVIEVTGGVD  247 (249)
T ss_pred             ccccCcCCCEEEeCCCEe
Confidence            888899999999999964

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.2e-35  Score=230.59  Aligned_cols=187  Identities=22%  Similarity=0.290  Sum_probs=171.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+.|.++|||||++|||+++|++|.+.|.+|++++|+++.+++..+.   ...++...||+.|.++.+++++++++.+..
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---NPEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---CcchheeeecccchhhHHHHHHHHHhhCCc
Confidence            46799999999999999999999999999999999999998877654   346778889999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      ++++|||||+.....-.-.+...++.++.+.+|+.+++++++.++|.+.+++.+.||+|||+-+..|......||++|+|
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAa  158 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAA  158 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHH
Confidence            99999999998763222245667888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeecc
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATG  204 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~  204 (280)
                      +.+++.+|++++...+|+|.-+.|..|+|+
T Consensus       159 iHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         159 IHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999999999999999999999997

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-35  Score=253.70  Aligned_cols=245  Identities=21%  Similarity=0.232  Sum_probs=188.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.+++||+++||||++|||+++|++|+++|++|++++|+.+..++..+++..   ..++.++.||+++.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998877776666532   2468889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--------
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------  161 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--------  161 (280)
                      +.++++|++|||||+...   +..+.+.++|+..+++|+.+++.+++.++|.|.+. .++||++||..+..+        
T Consensus        89 ~~~~~iD~li~nAG~~~~---~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~  164 (313)
T PRK05854         89 AEGRPIHLLINNAGVMTP---PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLN  164 (313)
T ss_pred             HhCCCccEEEECCccccC---CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccc
Confidence            999999999999998653   34457788999999999999999999999999754 689999999877553        


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHH--CCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCC
Q 023613          162 ----GLGPHAYTGSKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG  235 (280)
Q Consensus       162 ----~~~~~~Y~~sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (280)
                          .+++..|+.||+|+..|++.+++++  ...||+||+++||+++|++.................+..+.... .  -
T Consensus       165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~  241 (313)
T PRK05854        165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSAR-G--F  241 (313)
T ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhc-c--c
Confidence                2456789999999999999999864  45789999999999999986542111000000000011111100 0  1


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCeeecEEEe
Q 023613          236 TELTANDVANAVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       236 ~~~~~~dva~~~~~L~s~~~~~~~G~~i~~  265 (280)
                      .+.++++.|...++++..... .+|..+.-
T Consensus       242 ~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~  270 (313)
T PRK05854        242 LVGTVESAILPALYAATSPDA-EGGAFYGP  270 (313)
T ss_pred             ccCCHHHHHHHhhheeeCCCC-CCCcEECC
Confidence            245889999999888854322 24666543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-34  Score=243.01  Aligned_cols=222  Identities=31%  Similarity=0.453  Sum_probs=193.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|+++||||+++||++++++|+++|++|++++|+.+..++..+.+.. ..++.++.+|+++++++.++++++.++
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3457789999999999999999999999999999999998777766555543 246788899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||+|....  ..+.+.+.++|++.+++|+.+++.+++++.+.+.++..+++|++||..+..+.++...|+++
T Consensus        82 ~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  159 (239)
T PRK07666         82 LGSIDILINNAGISKF--GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSAS  159 (239)
T ss_pred             cCCccEEEEcCccccC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHH
Confidence            9999999999998654  66778899999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+++..+++.++.|+.++||+++.|+||.+.|++.........                 .+ ..+.+++|+|+.++.++
T Consensus       160 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-----------------~~-~~~~~~~~~a~~~~~~l  221 (239)
T PRK07666        160 KFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDG-----------------NP-DKVMQPEDLAEFIVAQL  221 (239)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccccc-----------------CC-CCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999997643211100                 01 45689999999999999


Q ss_pred             CCC
Q 023613          252 SDE  254 (280)
Q Consensus       252 s~~  254 (280)
                      +..
T Consensus       222 ~~~  224 (239)
T PRK07666        222 KLN  224 (239)
T ss_pred             hCC
Confidence            764

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=246.95  Aligned_cols=225  Identities=26%  Similarity=0.421  Sum_probs=192.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      |++|||||++|||++++++|+++|++|++++|+.+.++...+.+.. ..++.++.||+++++++.++++.+.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999999999998887777666543 357888999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +|||||....  ..+.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|+++|+++++
T Consensus        81 lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (270)
T PRK05650         81 IVNNAGVASG--GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVA  158 (270)
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            9999998765  67888999999999999999999999999999987777899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++.++.|+.+.||++++|+||+++|++........+.....   ....      ..+..++++|+|+.++..+...
T Consensus       159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        159 LSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQ---VGKL------LEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHH---HHHH------hhcCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999866533222111100   0000      1134679999999999998653

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.3e-35  Score=273.65  Aligned_cols=238  Identities=26%  Similarity=0.373  Sum_probs=198.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+.++++|||||++|||++++++|+++|++|++++|+.+.++++.+.+.. ..++.++.||++|++++.++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            346789999999999999999999999999999999998888777666643 2468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  ..+.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||.++..+.++...|++|
T Consensus       391 g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  468 (582)
T PRK05855        391 GVPDIVVNNAGIGMA--GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATS  468 (582)
T ss_pred             CCCcEEEECCccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHH
Confidence            999999999999765  7788899999999999999999999999999998765 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|++++++.++.|++++||+|++|+||+++|++...........+. ..........  .+..+..+|+++|+++++++
T Consensus       469 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~p~~va~~~~~~~  545 (582)
T PRK05855        469 KAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAED-EARRRGRADK--LYQRRGYGPEKVAKAIVDAV  545 (582)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccch-hhhHHhhhhh--hccccCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999987653211100000 0001111111  11134568999999999999


Q ss_pred             CCCCC
Q 023613          252 SDEAR  256 (280)
Q Consensus       252 s~~~~  256 (280)
                      +....
T Consensus       546 ~~~~~  550 (582)
T PRK05855        546 KRNKA  550 (582)
T ss_pred             HcCCC
Confidence            76543

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=246.16  Aligned_cols=221  Identities=22%  Similarity=0.323  Sum_probs=192.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++....++.++.+|+++++++.++++.+.+ +++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~   80 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGG   80 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence            4679999999999999999999999999999999999888877776664445788899999999999999999876 789


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++++|.+++.++++++||..+..+.++...|+++|++
T Consensus        81 id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  158 (263)
T PRK09072         81 INVLINNAGVNHF--ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFA  158 (263)
T ss_pred             CCEEEECCCCCCc--cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHH
Confidence            9999999998654  67888999999999999999999999999999988777999999999999898999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +.++++.++.+++++||+|+.++||+++|++........         .       ..+..+..+|+|+|+.+++++...
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~---------~-------~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQAL---------N-------RALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccc---------c-------ccccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999754321100         0       001135779999999999999754

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=246.63  Aligned_cols=229  Identities=27%  Similarity=0.337  Sum_probs=189.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++|+++||||+||||++++++|+++|++|++++|+.+..+.       ...+.++.+|++|+++++++++.+.+.++++|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------IPGVELLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            47899999999999999999999999999999998754322       13567889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+....|+++|++++
T Consensus        76 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (270)
T PRK06179         76 VLVNNAGVGLA--GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE  153 (270)
T ss_pred             EEEECCCCCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence            99999998765  7788899999999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      .+++.++.|++++||+++.++||+++|++..............................+..+|+++|+.++.+++..
T Consensus       154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999987644321110000000000011111112356789999999999999754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=3.1e-34  Score=242.24  Aligned_cols=232  Identities=24%  Similarity=0.329  Sum_probs=192.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      ++++||||++|||+++++.|+++|++|++++|+.+.++.+.+.+.  .++.++.+|+++.+++.++++++.+.++++|++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--cceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999999999999999999887776655543  367788999999999999999999999999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||..... .++.+.+.++|++.+++|+.+++.+++.+++.|.+.+.++||++||..+..+.++...|+++|++++++
T Consensus        79 i~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~  157 (248)
T PRK10538         79 VNNAGLALGL-EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_pred             EECCCccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHH
Confidence            9999975422 456788999999999999999999999999999877778999999999888888899999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeecccccc-CCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCC
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALA-HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  257 (280)
                      ++.++.++.++||++++|+||++.|+.... .+......      .......     ...++|+|+|+++++|++....+
T Consensus       158 ~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~------~~~~~~~-----~~~~~~~dvA~~~~~l~~~~~~~  226 (248)
T PRK10538        158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGK------AEKTYQN-----TVALTPEDVSEAVWWVATLPAHV  226 (248)
T ss_pred             HHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHH------HHhhccc-----cCCCCHHHHHHHHHHHhcCCCcc
Confidence            999999999999999999999998444322 12111100      0011111     34579999999999999877666


Q ss_pred             eeecEEE
Q 023613          258 ISGTNLM  264 (280)
Q Consensus       258 ~~G~~i~  264 (280)
                      .+++...
T Consensus       227 ~~~~~~~  233 (248)
T PRK10538        227 NINTLEM  233 (248)
T ss_pred             cchhhcc
Confidence            6666543

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=2.5e-34  Score=228.49  Aligned_cols=249  Identities=24%  Similarity=0.247  Sum_probs=213.1

Q ss_pred             cccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..|+||++||+|-.  +.|++.||+.|.++|+.+..+...+...+++.+..+......+++||+++.++++++++++++.
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            46899999999986  7999999999999999999999988544444444444445678899999999999999999999


Q ss_pred             cCCccEEEECCCCCC--CCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           92 FGTLDIMVNNAGISG--APCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~~~~d~li~~ag~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +|++|.+||+-+...  ...+++.+.+.|.|...+++..++...+.+++.|.|..  +|.++.++=..+..-.|++...+
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNvMG  159 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNVMG  159 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCchhH
Confidence            999999999999875  23367888999999999999999999999999999944  78999888888888889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      .+|++|++-+|.||.++.++|||||+|+-|++.|--.......        .....+.....+ +++-+++|||++..+|
T Consensus       160 vAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f--------~~~l~~~e~~aP-l~r~vt~eeVG~tA~f  230 (259)
T COG0623         160 VAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDF--------RKMLKENEANAP-LRRNVTIEEVGNTAAF  230 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccH--------HHHHHHHHhhCC-ccCCCCHHHhhhhHHH
Confidence            9999999999999999999999999999999999765544321        113333334444 4999999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      |+|+..+.+||+++.+|+|+....
T Consensus       231 LlSdLssgiTGei~yVD~G~~i~~  254 (259)
T COG0623         231 LLSDLSSGITGEIIYVDSGYHIMG  254 (259)
T ss_pred             HhcchhcccccceEEEcCCceeec
Confidence            999999999999999999997643

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=2.9e-34  Score=250.48  Aligned_cols=242  Identities=20%  Similarity=0.178  Sum_probs=191.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+|++|||||++|||+++|++|+++| ++|++++|+.+..++..+.+.. ...+.++.+|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            48999999999999999999999999 9999999998887777766643 246778899999999999999999888899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--CceEEEEcccccccc-----------
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIG-----------  161 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~-----------  161 (280)
                      +|++|||||+..+. ....+.+.++|++++++|+.+++.+++.++|.|.+.+  .++||++||..+...           
T Consensus        82 iD~lI~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        82 LDALVCNAAVYFPT-AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCEEEECCCccccC-ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            99999999985421 3345678899999999999999999999999997764  489999999876421           


Q ss_pred             ----------------------CCCCccchhhHHHHHHHHHHHHHHHC-CCCeEEEEEeCCee-eccccccCCCchhhhh
Q 023613          162 ----------------------GLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVSPYAV-ATGLALAHLPEEERTE  217 (280)
Q Consensus       162 ----------------------~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pg~v-~T~~~~~~~~~~~~~~  217 (280)
                                            ..++..|++||+|+..+++.+++++. ++||+|++|+||.| .|++.....+....  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~--  238 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRT--  238 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHH--
Confidence                                  12456799999999999999999995 46899999999999 69987543221100  


Q ss_pred             hhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          218 DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                          .+..+....   .+.+.+|++.|+.+++++.......+|.++..++.
T Consensus       239 ----~~~~~~~~~---~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~  282 (314)
T TIGR01289       239 ----LFPPFQKYI---TKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNR  282 (314)
T ss_pred             ----HHHHHHHHH---hccccchhhhhhhhHHhhcCcccCCCceeeecCCc
Confidence                011111100   13467999999999998876544457877765443

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=244.51  Aligned_cols=214  Identities=20%  Similarity=0.246  Sum_probs=180.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcch-HHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNL-GQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+|++|||||++|||+++|++|+++| ++|++++|+.+. +++..+++...  .++.++.+|++|++++.++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999995 999999999875 66666655432  3688899999999999999999886 4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||+|....  ..-...+.++..+++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||
T Consensus        86 g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sK  163 (253)
T PRK07904         86 GDVDVAIVAFGLLGD--AEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTK  163 (253)
T ss_pred             CCCCEEEEeeecCCc--hhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHH
Confidence            899999999998643  111222455667899999999999999999999988889999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++.+|++.++.|+.++||++++++||+++|++.....+.                      ....+|+|+|+.++..+.
T Consensus       164 aa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~----------------------~~~~~~~~~A~~i~~~~~  221 (253)
T PRK07904        164 AGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA----------------------PLTVDKEDVAKLAVTAVA  221 (253)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC----------------------CCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999986532110                      124689999999999996


Q ss_pred             CCC
Q 023613          253 DEA  255 (280)
Q Consensus       253 ~~~  255 (280)
                      ...
T Consensus       222 ~~~  224 (253)
T PRK07904        222 KGK  224 (253)
T ss_pred             cCC
Confidence            543

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-34  Score=248.77  Aligned_cols=237  Identities=26%  Similarity=0.401  Sum_probs=192.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.. ..++.++.+|++|.++++++++.+.+.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999998777776666543 34678899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC------ceEEEEccccccccCCCCcc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK------GTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~iv~isS~~~~~~~~~~~~  167 (280)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.++..      ++||++||..+..+.++...
T Consensus        83 ~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  160 (287)
T PRK06194         83 AVHLLFNNAGVGAG--GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI  160 (287)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence            99999999999765  67788999999999999999999999999999987654      79999999999999899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCC--CCeEEEEEeCCeeeccccccCCCchhhh------hhhhhhHHHHHhhhccCCCCCCC
Q 023613          168 YTGSKHAVLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERT------EDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~--~gi~v~~v~pg~v~T~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                      |+++|++++.+++.++.++..  .+|++++++||+++|++...........      .............. .. ...++
T Consensus       161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~s  238 (287)
T PRK06194        161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKA-VG-SGKVT  238 (287)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhh-hh-ccCCC
Confidence            999999999999999999874  5699999999999999875432111000      00000011111110 01 12379


Q ss_pred             HHHHHHHHHHhcCCCC
Q 023613          240 ANDVANAVLFLASDEA  255 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~  255 (280)
                      ++|+|+.++.++....
T Consensus       239 ~~dva~~i~~~~~~~~  254 (287)
T PRK06194        239 AEEVAQLVFDAIRAGR  254 (287)
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999875443

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-34  Score=239.64  Aligned_cols=229  Identities=26%  Similarity=0.329  Sum_probs=188.5

Q ss_pred             EEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 023613           22 LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNN  101 (280)
Q Consensus        22 lItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~  101 (280)
                      |||||++|||+++++.|+++|++|++++|+.+..+...+.++...++.++.+|+++++++.+++++    .+++|++|||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEEC
Confidence            699999999999999999999999999999877776666554335678889999999999888775    3789999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHHHH
Q 023613          102 AGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN  181 (280)
Q Consensus       102 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~  181 (280)
                      +|....  .++.+.+.+++++++++|+.+++.+.+  .+.+  .+.++||++||..+..+.++...|+++|++++++++.
T Consensus        77 ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         77 AADTPG--GPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             CCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            998765  677888999999999999999999999  4444  3468999999999999989999999999999999999


Q ss_pred             HHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeec
Q 023613          182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT  261 (280)
Q Consensus       182 la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~  261 (280)
                      ++.|+..  |++++++||+++|++.....+....  .    ........ .+.++..+|+|+|+++++|++.  .+++|+
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~--~----~~~~~~~~-~~~~~~~~~~dva~~~~~l~~~--~~~~G~  219 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDARE--A----MFAAAAER-LPARRVGQPEDVANAILFLAAN--GFTTGS  219 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccchH--H----HHHHHHhc-CCCCCCcCHHHHHHHHHHHhcC--CCcCCc
Confidence            9999975  9999999999999986542221100  0    11111222 2336788999999999999974  589999


Q ss_pred             EEEeCCcccc
Q 023613          262 NLMVDGGFTS  271 (280)
Q Consensus       262 ~i~~dgG~~~  271 (280)
                      .+.+|||...
T Consensus       220 ~~~v~gg~~~  229 (230)
T PRK07041        220 TVLVDGGHAI  229 (230)
T ss_pred             EEEeCCCeec
Confidence            9999999753

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.9e-36  Score=226.93  Aligned_cols=242  Identities=35%  Similarity=0.530  Sum_probs=215.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .+|-++|||||.||+|++.+++|+++|++|++.+-...+..+..+++.  .++.|...|++++++++..++..+.+||++
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg--~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG--GKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC--CceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            578999999999999999999999999999999998888888888887  578899999999999999999999999999


Q ss_pred             cEEEECCCCCCCC----CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC------CCceEEEEccccccccCCCC
Q 023613           96 DIMVNNAGISGAP----CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        96 d~li~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~~~  165 (280)
                      |.+|||||+....    ...-...+.|++++.+++|+.+.++.+++-.-+|-++      .+|-||+..|.++..+..++
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq  164 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ  164 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch
Confidence            9999999986431    1234567899999999999999999999988888664      24789999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ++|++||.++.+|+--+++.++..|||++.|.||.++||+.... |++         ...|+.+..+.-.|+..|.|.+.
T Consensus       165 aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl-pek---------v~~fla~~ipfpsrlg~p~eyah  234 (260)
T KOG1199|consen  165 AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL-PEK---------VKSFLAQLIPFPSRLGHPHEYAH  234 (260)
T ss_pred             hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh-hHH---------HHHHHHHhCCCchhcCChHHHHH
Confidence            99999999999999999999999999999999999999997653 321         56677777776789999999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .+-.+.  +..+++|++|.+||-..+
T Consensus       235 lvqaii--enp~lngevir~dgalrm  258 (260)
T KOG1199|consen  235 LVQAII--ENPYLNGEVIRFDGALRM  258 (260)
T ss_pred             HHHHHH--hCcccCCeEEEecceecC
Confidence            999988  567999999999997765

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1.9e-33  Score=237.09  Aligned_cols=241  Identities=29%  Similarity=0.365  Sum_probs=197.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+|++|||||+++||++++++|+++|++|++++|+. +..+...+.+..  ...+.++.+|+++.+++.++++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999999864 334444333322  2357788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||....  .++.+.+.+++++.+++|+.+.+.+++++.+.+.++ .+.+++++|..+..+.++...|+++|
T Consensus        84 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK  160 (249)
T PRK09135         84 GRLDALVNNASSFYP--TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAK  160 (249)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHH
Confidence            999999999998765  667778889999999999999999999999988654 47888888887777888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++.+ +++++++.||++.|++....++...        ......+  .+...+.+++|+++++.+++.
T Consensus       161 ~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~--------~~~~~~~--~~~~~~~~~~d~a~~~~~~~~  229 (249)
T PRK09135        161 AALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEA--------RQAILAR--TPLKRIGTPEDIAEAVRFLLA  229 (249)
T ss_pred             HHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHH--------HHHHHhc--CCcCCCcCHHHHHHHHHHHcC
Confidence            9999999999999965 6999999999999998644332211        1111111  233667789999999988886


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      + ..+.+|+++.+++|...
T Consensus       230 ~-~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        230 D-ASFITGQILAVDGGRSL  247 (249)
T ss_pred             c-cccccCcEEEECCCeec
Confidence            5 45789999999999853

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=240.01  Aligned_cols=233  Identities=22%  Similarity=0.272  Sum_probs=192.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+.+|+++||||+++||++++++|+++|++|++++|+.+.+++..+.+.. ..++.++.+|+++++++.++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35679999999999999999999999999999999988776665554432 24677889999999999999999998889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  ....+.+.+++++.+++|+.+++.+++++++.|.++..++||++||..+..+.++...|+++|+
T Consensus        87 ~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (274)
T PRK07775         87 EIEVLVSGAGDTYF--GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKA  164 (274)
T ss_pred             CCCEEEECCCcCCC--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHH
Confidence            99999999998754  6677889999999999999999999999999988777789999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.+++.++.++..+||++++++||+++|++.....+..  ....   ...+........+++++++|+|++++++++.
T Consensus       165 a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~  239 (274)
T PRK07775        165 GLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEV--IGPM---LEDWAKWGQARHDYFLRASDLARAITFVAET  239 (274)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhh--hhHH---HHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence            9999999999999989999999999999999754322211  0000   0111110111125689999999999999975


Q ss_pred             C
Q 023613          254 E  254 (280)
Q Consensus       254 ~  254 (280)
                      .
T Consensus       240 ~  240 (274)
T PRK07775        240 P  240 (274)
T ss_pred             C
Confidence            3

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-33  Score=237.61  Aligned_cols=214  Identities=21%  Similarity=0.276  Sum_probs=188.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+..   ..++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999998877776655432   346888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-CccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-~~~Y~~sK~  173 (280)
                      +|++|||||+...  ..+.+.+.+.+++.+++|+.+++.+++.+++.|.+.+.++||++||..+..+.++ ...|+++|+
T Consensus        82 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         82 LDRVIVNAGIGKG--ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCEEEECCCcCCC--CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHH
Confidence            9999999999765  6677888999999999999999999999999998877889999999998888775 689999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.+++.++.++...|+++++|+||+++|++.......                      ....+++++|+.++..+..
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~----------------------~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKST----------------------PFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccccC----------------------CccCCHHHHHHHHHHHHhc
Confidence            999999999999998899999999999999986542110                      2357899999999998865


Q ss_pred             CC
Q 023613          254 EA  255 (280)
Q Consensus       254 ~~  255 (280)
                      ..
T Consensus       218 ~~  219 (248)
T PRK08251        218 EP  219 (248)
T ss_pred             CC
Confidence            43

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-34  Score=241.90  Aligned_cols=236  Identities=22%  Similarity=0.215  Sum_probs=187.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+ ..+.+.+.++. ..++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999999999998753 34444444432 2467788999999999999999999988


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-----ccCCCCcc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-----IGGLGPHA  167 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-----~~~~~~~~  167 (280)
                      +++|++|||||....  .   .   .+++..+++|+.+++.+++++.|+|.+  .+++|++||..+.     .+.+.+..
T Consensus        83 ~~~d~vi~~ag~~~~--~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~  152 (248)
T PRK07806         83 GGLDALVLNASGGME--S---G---MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEP  152 (248)
T ss_pred             CCCcEEEECCCCCCC--C---C---CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccH
Confidence            999999999986432  1   1   135678999999999999999999853  4799999996543     23355678


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+++|++++.+++.++.+++.+||++++|.||.+.|++......... . ..   ..    ....+.+++++|+|+|+++
T Consensus       153 Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~-~-~~---~~----~~~~~~~~~~~~~dva~~~  223 (248)
T PRK07806        153 VARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLN-P-GA---IE----ARREAAGKLYTVSEFAAEV  223 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCC-H-HH---HH----HHHhhhcccCCHHHHHHHH
Confidence            99999999999999999999999999999999999987543221100 0 00   00    1112347899999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++++  ..+++|+++.++||...
T Consensus       224 ~~l~~--~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        224 ARAVT--APVPSGHIEYVGGADYF  245 (248)
T ss_pred             HHHhh--ccccCccEEEecCccce
Confidence            99997  45789999999999764

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-34  Score=249.07  Aligned_cols=240  Identities=24%  Similarity=0.241  Sum_probs=189.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+.+.   ...++.++.+|+++.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999877666555443   13467889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc---------
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---------  160 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------  160 (280)
                      +.++++|++|||||....    ....+.++++..+++|+.+++.+++.++|.|.+.+.++||++||..+..         
T Consensus        91 ~~~~~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYT----PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             hhCCCCCEEEECCccccC----CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            999999999999998643    2346778899999999999999999999999877778999999986543         


Q ss_pred             ----cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEE--eCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCC
Q 023613          161 ----GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV--SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       161 ----~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v--~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                          +.++...|++||++++.|++.++++++.+|++|+++  +||+++|++.+.. +....     . ....+   .+  
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~-~~~~~-----~-~~~~~---~~--  234 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL-PRALR-----P-VATVL---AP--  234 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC-cHHHH-----H-HHHHH---Hh--
Confidence                223457899999999999999999999888777665  6999999987643 21100     0 00111   01  


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       235 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ....++++-+...++++.. ....+|..+..||+.
T Consensus       235 ~~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        235 LLAQSPEMGALPTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             hhcCCHHHHHHHHHHHhcC-CCcCCCeEEccCccc
Confidence            1134677777777777754 345688888877654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=4e-33  Score=235.72  Aligned_cols=242  Identities=39%  Similarity=0.576  Sum_probs=198.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch--HHHHHHHhCCC--CCeEEEecCCCC-HHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL--GQQVCQSLGGE--PDTFFCHCDVTK-EEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~--~~~~~~~~D~~~-~~~~~~~~~~~~   89 (280)
                      ++.+|++|||||++|||+++|+.|+++|+.|+++.|+.+.  .+...+.....  ..+.+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4679999999999999999999999999998888887653  33333322211  257778899998 999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-Cccc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHAY  168 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-~~~Y  168 (280)
                      +.+|++|++|||||+.... .++.+.+.++|++.+++|+.+++.+++.+.|.+.++   +||++||..+. +.++ +..|
T Consensus        82 ~~~g~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y  156 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAY  156 (251)
T ss_pred             HHcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchH
Confidence            9999999999999997541 278889999999999999999999999888888733   99999999999 7777 4999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++||+|+++|++.++.|++++||++++|+||+++|++........ ...     ........  +..++..|++++..+.
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~-~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~  228 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE-LEA-----LKRLAARI--PLGRLGTPEEVAAAVA  228 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhh-hhH-----HHHHHhcC--CCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999977544332 000     01111111  3247888999999999


Q ss_pred             HhcCCC-CCCeeecEEEeCCcc
Q 023613          249 FLASDE-ARYISGTNLMVDGGF  269 (280)
Q Consensus       249 ~L~s~~-~~~~~G~~i~~dgG~  269 (280)
                      ++.+.. ..+++|+.+.+|||+
T Consensus       229 ~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         229 FLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HHcCcchhccccCCEEEeCCCC
Confidence            998774 668999999999986

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-33  Score=238.44  Aligned_cols=219  Identities=31%  Similarity=0.393  Sum_probs=188.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH-cCCccE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK-FGTLDI   97 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d~   97 (280)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.+.+. ..++.++.+|+++.+++.++++.+.+. ++++|+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-AGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            789999999999999999999999999999999988877766554 346888999999999999999998776 689999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +|||||....  ..+.+.+.+++++++++|+.+++.+++++.++|.+++.++||++||..+..+.++...|+++|++++.
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  158 (260)
T PRK08267         81 LFNNAGILRG--GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRG  158 (260)
T ss_pred             EEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence            9999998765  67888999999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.++.++.++||++++|.||+++|++........ .       . .....    .+...+|+|+|++++.++..
T Consensus       159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~-~-------~-~~~~~----~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEV-D-------A-GSTKR----LGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCCcCCcccccccchh-h-------h-hhHhh----ccCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999865411100 0       0 00000    13357899999999999853

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=2.2e-33  Score=233.92  Aligned_cols=191  Identities=26%  Similarity=0.344  Sum_probs=176.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   92 (280)
                      ..+.+|.|+|||+.+|+|+.+|++|.+.|..|++.+-+++..+.+..+.. +++...+..|++++++++++.+.+++.. 
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-SPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-CCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            45789999999999999999999999999999999988888887777664 4677778999999999999999999876 


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 -GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       .++..||||||+.... ++.+..+.+++++.+++|++|++.++++++|+++ +..||||+++|+.+..+.|..++|++|
T Consensus       104 ~~gLwglVNNAGi~~~~-g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr-~arGRvVnvsS~~GR~~~p~~g~Y~~S  181 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFL-GPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR-RARGRVVNVSSVLGRVALPALGPYCVS  181 (322)
T ss_pred             cccceeEEecccccccc-CccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH-hccCeEEEecccccCccCcccccchhh
Confidence             3699999999987654 8899999999999999999999999999999986 456999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL  207 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~  207 (280)
                      |+|++.|+.++++|+.++||+|..|.||.+.|++..
T Consensus       182 K~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  182 KFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999999999999999999999975

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=4.5e-33  Score=233.40  Aligned_cols=236  Identities=37%  Similarity=0.533  Sum_probs=198.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +||||++++||+.++++|+++|++|++++|+. +..+...+.+.. ..++.++.+|++++++++++++.+.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 444444444432 2467889999999999999999999988999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      ||++|....  ..+.+.+.+++++.+++|+.+.+.+.+.+.+.+.+.+.++++++||..+..+.+.+..|+++|++++.+
T Consensus        81 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        81 VNNAGITRD--NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            999998654  556778889999999999999999999999998776678999999999999989999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCe
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI  258 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  258 (280)
                      ++.++.++...|++++.++||+++|++.....+ ..        ...+. . ..+.+++.+++|+++++++++++...+.
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~-~~--------~~~~~-~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~  227 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDKLSE-KV--------KKKIL-S-QIPLGRFGTPEEVANAVAFLASDEASYI  227 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhhcCh-HH--------HHHHH-h-cCCcCCCcCHHHHHHHHHHHhCcccCCc
Confidence            999999999899999999999999987543211 10        11111 1 1223678899999999999998877789


Q ss_pred             eecEEEeCCcc
Q 023613          259 SGTNLMVDGGF  269 (280)
Q Consensus       259 ~G~~i~~dgG~  269 (280)
                      +|+.+++|+|+
T Consensus       228 ~g~~~~~~~g~  238 (239)
T TIGR01830       228 TGQVIHVDGGM  238 (239)
T ss_pred             CCCEEEeCCCc
Confidence            99999999996

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-33  Score=237.50  Aligned_cols=243  Identities=20%  Similarity=0.272  Sum_probs=195.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .|++|||||+++||++++++|+++|++|+++.|+.+..+.+.+...  .++.++.+|+++.+++.++++++.+.++++|+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG--DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999999877766555433  36788899999999999999999988899999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      ||||||....  .+..+.+.+++++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|+++|++++.
T Consensus        80 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (276)
T PRK06482         80 VVSNAGYGLF--GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG  157 (276)
T ss_pred             EEECCCCCCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence            9999998765  67778899999999999999999999999999987777899999999988888899999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchh---hhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE---RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++.++.++.++||+++.++||.+.|++.........   ....+...+.......  ...-..+++|++++++..+...
T Consensus       158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~a~~~~~~~~  235 (276)
T PRK06482        158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADG--SFAIPGDPQKMVQAMIASADQT  235 (276)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhc--cCCCCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999987543221110   0001111111111111  1122478999999999998543


Q ss_pred             CCCeeecEEEeCCcc
Q 023613          255 ARYISGTNLMVDGGF  269 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~  269 (280)
                      .   .+..+++.+|.
T Consensus       236 ~---~~~~~~~g~~~  247 (276)
T PRK06482        236 P---APRRLTLGSDA  247 (276)
T ss_pred             C---CCeEEecChHH
Confidence            2   24557776664

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=228.97  Aligned_cols=197  Identities=21%  Similarity=0.204  Sum_probs=170.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||++|||++++++|+++ ++|++++|+.+                .+.||+++++++++++++    ++++|++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~----~~~id~lv   60 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEK----VGKVDAVV   60 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHh----cCCCCEEE
Confidence            6999999999999999999999 99999998753                357999999999888765    47999999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      ||||....  .++.+.+.++|++.+++|+.+++.+++.+.|+|.+  .++|+++||..+..+.+++..|+++|+++++|+
T Consensus        61 ~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  136 (199)
T PRK07578         61 SAAGKVHF--APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGFV  136 (199)
T ss_pred             ECCCCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHHH
Confidence            99998654  67888999999999999999999999999999964  489999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCee
Q 023613          180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS  259 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~  259 (280)
                      +.++.|+ ++||+|++|+||+++|++....               .+     .+.....+|+|+|+.++.+++.   ..+
T Consensus       137 ~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~---------------~~-----~~~~~~~~~~~~a~~~~~~~~~---~~~  192 (199)
T PRK07578        137 KAAALEL-PRGIRINVVSPTVLTESLEKYG---------------PF-----FPGFEPVPAARVALAYVRSVEG---AQT  192 (199)
T ss_pred             HHHHHHc-cCCeEEEEEcCCcccCchhhhh---------------hc-----CCCCCCCCHHHHHHHHHHHhcc---cee
Confidence            9999999 8899999999999999863211               00     0113467999999999999963   589


Q ss_pred             ecEEEe
Q 023613          260 GTNLMV  265 (280)
Q Consensus       260 G~~i~~  265 (280)
                      |+.+.+
T Consensus       193 g~~~~~  198 (199)
T PRK07578        193 GEVYKV  198 (199)
T ss_pred             eEEecc
Confidence            998875

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.5e-33  Score=232.53  Aligned_cols=234  Identities=21%  Similarity=0.355  Sum_probs=195.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++||||+++||.++++.|+++|++|++++|+++..+.+.+.+....++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46799999999999999999999999999999999998877766555543346788999999999999999999888899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~~~Y~~sK~  173 (280)
                      +|.+|+++|....  .++.  +.+++++.+++|+.+++.+.+.++|.+.+  .+++|++||..+.. +.+.+..|+++|+
T Consensus        82 id~ii~~ag~~~~--~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~  155 (238)
T PRK05786         82 IDGLVVTVGGYVE--DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKA  155 (238)
T ss_pred             CCEEEEcCCCcCC--CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHH
Confidence            9999999997543  3333  34889999999999999999999999854  48999999987743 5667788999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.+++.++.++...||+++.++||++.|++...    ..        +..    .........+++|+++.+++++++
T Consensus       156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~----~~--------~~~----~~~~~~~~~~~~~va~~~~~~~~~  219 (238)
T PRK05786        156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE----RN--------WKK----LRKLGDDMAPPEDFAKVIIWLLTD  219 (238)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch----hh--------hhh----hccccCCCCCHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999986321    00        000    011113468999999999999998


Q ss_pred             CCCCeeecEEEeCCccc
Q 023613          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+.+.+|||.-
T Consensus       220 ~~~~~~g~~~~~~~~~~  236 (238)
T PRK05786        220 EADWVDGVVIPVDGGAR  236 (238)
T ss_pred             cccCccCCEEEECCccc
Confidence            88889999999998864

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=235.23  Aligned_cols=226  Identities=23%  Similarity=0.302  Sum_probs=183.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||++|||++++++|+++|++|++++|+.+..+.+.+     ..+.++.+|+++.++++++++.+.+.++++|++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   76 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-----AGFTAVQLDVNDGAALARLAEELEAEHGGLDVL   76 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            789999999999999999999999999999998876654432     135678899999999999999999988999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||....  .++.+.+.+++++.+++|+.+++.++++++|.|.+ ..++||++||..+..+.+....|+++|++++.+
T Consensus        77 i~~ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  153 (274)
T PRK05693         77 INNAGYGAM--GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL  153 (274)
T ss_pred             EECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            999998654  67888999999999999999999999999999864 358999999999999989999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh------hhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER------TEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++.++.|++++||+|++++||+++|++..........      .....  ...+............+|+++|+.++..+.
T Consensus       154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~  231 (274)
T PRK05693        154 SDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPL--REHIQARARASQDNPTPAAEFARQLLAAVQ  231 (274)
T ss_pred             HHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHH--HHHHHHHHHhccCCCCCHHHHHHHHHHHHh
Confidence            9999999999999999999999999986543211100      00000  000000000011345689999999999886


Q ss_pred             CC
Q 023613          253 DE  254 (280)
Q Consensus       253 ~~  254 (280)
                      ..
T Consensus       232 ~~  233 (274)
T PRK05693        232 QS  233 (274)
T ss_pred             CC
Confidence            43

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=5.5e-33  Score=220.59  Aligned_cols=224  Identities=23%  Similarity=0.258  Sum_probs=186.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc-CCeEEE-EecCcchHHHHHHH-hCCCCCeEEEecCCCCHHHHHHHHHHHHHH--c
Q 023613           18 GRVALITGGATGIGESTVRLFHKH-GAKVCI-ADVQDNLGQQVCQS-LGGEPDTFFCHCDVTKEEDVCSAVDLTVEK--F   92 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~-g~~V~~-~~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~   92 (280)
                      -|.++||||.+|||..++++|.+. |-.+++ +.|+.+......+. .....+++.++.|+++.+++..+++++.+.  .
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            466999999999999999999975 666655 55556663322222 233478999999999999999999999987  4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC-----------ceEEEEcccccccc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-----------GTIISICSVAGAIG  161 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----------~~iv~isS~~~~~~  161 (280)
                      .++|++|||||+..+. ....+.+.+.|-+++++|..++++++|+++|++++...           +.||++||..+..+
T Consensus        83 ~GlnlLinNaGi~~~y-~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSY-NTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             CCceEEEeccceeeec-ccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence            6899999999998653 55666778889999999999999999999999987642           37999999887654


Q ss_pred             C---CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCC
Q 023613          162 G---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL  238 (280)
Q Consensus       162 ~---~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
                      .   .++.+|..||+|++.|+|.++.|+++.+|-|..+|||+|.|+|...                          ....
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~--------------------------~a~l  215 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK--------------------------KAAL  215 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC--------------------------Cccc
Confidence            3   3568999999999999999999999999999999999999999653                          3346


Q ss_pred             CHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          239 TANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       239 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      ++||.+..++.........-+|..++.||-
T Consensus       216 tveeSts~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  216 TVEESTSKLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             chhhhHHHHHHHHHhcCcccCcceEccCCC
Confidence            889999999888887777889999988874

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=233.87  Aligned_cols=225  Identities=28%  Similarity=0.421  Sum_probs=189.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +|++|||||+++||+++++.|+++|++|++++|+++..+...+.+.. ..++.++.+|+++++++.++++++.+.++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999998776666555543 24678889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCC-CHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           97 IMVNNAGISGAPCPDIREA-DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||+|....  ..+.+. +.+++++.+++|+.+++.+++.+++.|.+. .+++|++||..+..+.+++..|+++|+++
T Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  157 (263)
T PRK06181         81 ILVNNAGITMW--SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHAL  157 (263)
T ss_pred             EEEECCCcccc--cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHH
Confidence            99999998755  667777 899999999999999999999999988644 58999999999988888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      +++++.++.++..++++++++.||.+.|++............          ........++++|+|+|+++++++....
T Consensus       158 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~dva~~i~~~~~~~~  227 (263)
T PRK06181        158 HGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPL----------GKSPMQESKIMSAEECAEAILPAIARRK  227 (263)
T ss_pred             HHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccccc----------ccccccccCCCCHHHHHHHHHHHhhCCC
Confidence            999999999999999999999999999998765432211100          0000011468999999999999997543

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-32  Score=230.53  Aligned_cols=212  Identities=21%  Similarity=0.210  Sum_probs=184.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|+++||||++|||++++++|+++|++|++++|+++..+...+.+..  ..++.++.+|+++++++.++++++.+   ++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            37899999999999999999999999999999998877766555432  34788899999999999999988754   57


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||+|....  ....+.+.+++.+.+++|+.+++.+++++.|+|.+.+.++++++||..+..+.++...|+++|+++
T Consensus        78 d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  155 (243)
T PRK07102         78 DIVLIAVGTLGD--QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAAL  155 (243)
T ss_pred             CEEEECCcCCCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHH
Confidence            999999998765  667788999999999999999999999999999887789999999999988888999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      +++++.++.|+.+.||++++|+||+++|++......                     +.....+|+++++.++.+++...
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~---------------------~~~~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        156 TAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKL---------------------PGPLTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCcccChhhhccCC---------------------CccccCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999997543210                     00345789999999999997654

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-32  Score=227.75  Aligned_cols=225  Identities=32%  Similarity=0.438  Sum_probs=193.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+.+|+++||||+++||++++++|+++|++|++++|+++.++...+.+....++.++.+|+++.+++.++++++.+.+++
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            36689999999999999999999999999999999998877777676654356888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++||++|....  +++.+.+.+++++.+++|+.+++.+++++++.+ ++..+++|++||..+..+.++...|+++|++
T Consensus        83 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a  159 (237)
T PRK07326         83 LDVLIANAGVGHF--APVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFG  159 (237)
T ss_pred             CCEEEECCCCCCC--CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHHH
Confidence            9999999998754  667889999999999999999999999999998 4456899999999888888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +.++++.++.++...|+++++|+||++.|++........          .          ...++++|+++.++++++..
T Consensus       160 ~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~----------~----------~~~~~~~d~a~~~~~~l~~~  219 (237)
T PRK07326        160 LVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK----------D----------AWKIQPEDIAQLVLDLLKMP  219 (237)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh----------h----------hccCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999998754432110          0          12368999999999999876


Q ss_pred             CCCeeecE
Q 023613          255 ARYISGTN  262 (280)
Q Consensus       255 ~~~~~G~~  262 (280)
                      ...+.+++
T Consensus       220 ~~~~~~~~  227 (237)
T PRK07326        220 PRTLPSKI  227 (237)
T ss_pred             ccccccce
Confidence            54444443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9e-34  Score=222.59  Aligned_cols=225  Identities=25%  Similarity=0.298  Sum_probs=185.5

Q ss_pred             CCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH-HcCC
Q 023613           17 VGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE-KFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~-~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   94 (280)
                      +.|.+||||++ ||||.++++.|++.|+.|+.++|+-+...++....    .....+.|+++++++..+..++.+ .+|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~----gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF----GLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh----CCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            47889999886 89999999999999999999999999888776443    366789999999999999999998 6799


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+++||||..-.  .+..+.+.++.++.|++|++|.+.+++++. ++.-+..|.||+++|..+..|.|..+.|.+||+|
T Consensus        82 ld~L~NNAG~~C~--~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAA  158 (289)
T KOG1209|consen   82 LDLLYNNAGQSCT--FPALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAA  158 (289)
T ss_pred             eEEEEcCCCCCcc--cccccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHHHHH
Confidence            9999999998765  788999999999999999999999999988 4445667999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhh----hhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM----VGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +.++++.|+.|++++||+|..+.||.|.|++..+.++......-+.    ...+..+...+.+.......++.++.++
T Consensus       159 ihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~l~~~t~~~~PE~~~y~pyrk~i~e~~~p~~~~a~i~q~~~~~~  236 (289)
T KOG1209|consen  159 IHAYARTLRLELKPFGVRVINAITGGVATDIADKRLPETTIYNFPEGREYFPYRKTIAEDNKPMPADAYIKQLVKDIL  236 (289)
T ss_pred             HHHhhhhcEEeeeccccEEEEecccceecccccCCCcccchhhCccccccccHHHHHHhhcCCCchhhHHHHHhcccc
Confidence            9999999999999999999999999999999887544322111110    1233333333334355556666655543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=5.7e-32  Score=236.94  Aligned_cols=241  Identities=18%  Similarity=0.130  Sum_probs=187.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+.+|++|||||++|||++++++|+++|++|++++|+.+..++..+.+.. ..++.++.+|+++.++++++++++.+..
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            346799999999999999999999999999999999998888777776642 2467889999999999999999988777


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC--ceEEEEccccccc----------
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK--GTIISICSVAGAI----------  160 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~isS~~~~~----------  160 (280)
                      +++|+||||||+.... ....+.+.++|+..+++|+.+++.+++.++|.|.+.+.  ++||++||.....          
T Consensus        82 ~~iD~li~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         82 KPLDALVCNAAVYMPL-LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCccEEEECCcccCCC-CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            8899999999986431 23346788999999999999999999999999987653  6999999965421          


Q ss_pred             -------------------------cCCCCccchhhHHHHHHHHHHHHHHHC-CCCeEEEEEeCCee-eccccccCCCch
Q 023613          161 -------------------------GGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVSPYAV-ATGLALAHLPEE  213 (280)
Q Consensus       161 -------------------------~~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pg~v-~T~~~~~~~~~~  213 (280)
                                               +..++..|+.||.+...+++.+++++. .+||++++++||.| .|++.+...+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~  240 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLF  240 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHH
Confidence                                     012346899999999999999999995 46899999999999 588765432210


Q ss_pred             hhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEE
Q 023613          214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLM  264 (280)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~  264 (280)
                         .    ....+..+.  ......++++.++.+++++.+.....+|..+.
T Consensus       241 ---~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        241 ---Q----KLFPWFQKN--ITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             ---H----HHHHHHHHH--HhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence               0    011111110  11345688888888888876554456787776

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=260.09  Aligned_cols=219  Identities=22%  Similarity=0.288  Sum_probs=189.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.++++.+.+.. ..++.++.+|+++.++++++++++.+.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999999999999887777666532 3568889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCC--CHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREA--DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++|++|||||....  ..+.+.  +.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++
T Consensus       447 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  524 (657)
T PRK07201        447 GHVDYLVNNAGRSIR--RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVA  524 (657)
T ss_pred             CCCCEEEECCCCCCC--CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHH
Confidence            999999999998643  333322  3688999999999999999999999998888899999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+++++|++.++.|++++||+|++|+||+++|++.......                   . .....+|+++|+.++..
T Consensus       525 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~-------------------~-~~~~~~~~~~a~~i~~~  584 (657)
T PRK07201        525 SKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY-------------------N-NVPTISPEEAADMVVRA  584 (657)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc-------------------c-CCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999986432100                   0 02457899999999987


Q ss_pred             cCCC
Q 023613          251 ASDE  254 (280)
Q Consensus       251 ~s~~  254 (280)
                      +...
T Consensus       585 ~~~~  588 (657)
T PRK07201        585 IVEK  588 (657)
T ss_pred             HHhC
Confidence            7543

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-32  Score=227.25  Aligned_cols=226  Identities=18%  Similarity=0.196  Sum_probs=179.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH-HHHHc---CC
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL-TVEKF---GT   94 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---~~   94 (280)
                      +++|||||++|||++++++|+++|++|++++|+.+...  .+  ....++.++.+|+++.+++++++++ +.+.+   ++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AA--AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hh--ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            36999999999999999999999999999999865321  11  1124678899999999999998877 55544   47


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||+|..... .++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        78 ~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (243)
T PRK07023         78 RVLLINNAGTVEPI-GPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA  156 (243)
T ss_pred             ceEEEEcCcccCCC-CccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence            99999999986532 56778899999999999999999999999999987777999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH-HHHHhcCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN-AVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~-~~~~L~s~  253 (280)
                      ++++++.++.+ ...||++++|+||+++|++............   .....+ ... .+.+++.+|+|+|+ .+.+|.++
T Consensus       157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~---~~~~~~-~~~-~~~~~~~~~~~va~~~~~~l~~~  230 (243)
T PRK07023        157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERF---PMRERF-REL-KASGALSTPEDAARRLIAYLLSD  230 (243)
T ss_pred             HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccc---hHHHHH-HHh-hhcCCCCCHHHHHHHHHHHHhcc
Confidence            99999999999 7789999999999999998543211110000   001111 111 22378899999999 55677766


Q ss_pred             CC
Q 023613          254 EA  255 (280)
Q Consensus       254 ~~  255 (280)
                      ..
T Consensus       231 ~~  232 (243)
T PRK07023        231 DF  232 (243)
T ss_pred             cc
Confidence            43

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.5e-32  Score=234.04  Aligned_cols=233  Identities=24%  Similarity=0.257  Sum_probs=188.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..++.+++++|||+++|||+++|+.|+++|++|++++|+.+..++..+.+..   ..++.++.||+++.+++++++++.+
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999999888888888764   3578889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--------
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------  161 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--------  161 (280)
                      +.++++|++|||||+...+    ...+.|.+|.+|.+|+.|++.+++.++|.|+....+|||++||......        
T Consensus       110 ~~~~~ldvLInNAGV~~~~----~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~  185 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPP----FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSG  185 (314)
T ss_pred             hcCCCccEEEeCcccccCC----cccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccc
Confidence            9999999999999998753    2677789999999999999999999999998877799999999775110        


Q ss_pred             -----CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCC
Q 023613          162 -----GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT  236 (280)
Q Consensus       162 -----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (280)
                           ......|+.||.++..+++.+++.+.. ||.+++++||.+.|+...+....          ...+......  ..
T Consensus       186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~~~----------~~~l~~~l~~--~~  252 (314)
T KOG1208|consen  186 EKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVNLL----------LRLLAKKLSW--PL  252 (314)
T ss_pred             hhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecchHH----------HHHHHHHHHH--Hh
Confidence                 112234999999999999999999988 99999999999999943331111          1111111111  11


Q ss_pred             CCCHHHHHHHHHHhcCC-CCCCeeecE
Q 023613          237 ELTANDVANAVLFLASD-EARYISGTN  262 (280)
Q Consensus       237 ~~~~~dva~~~~~L~s~-~~~~~~G~~  262 (280)
                      +-++++-|+..++++-. +-...+|..
T Consensus       253 ~ks~~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  253 TKSPEQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             ccCHHHHhhheehhccCccccCccccc
Confidence            24889999999888854 334555555

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-31  Score=225.39  Aligned_cols=206  Identities=22%  Similarity=0.221  Sum_probs=174.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |+++||||++|||++++++|+++|++|++++|+++.++++.+..   .++.++.||+++.++++++++++.   ..+|.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~---~~~d~~   75 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQS---ANIFTLAFDVTDHPGTKAALSQLP---FIPELW   75 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---CCCeEEEeeCCCHHHHHHHHHhcc---cCCCEE
Confidence            78999999999999999999999999999999987766654432   357788999999999999888764   258999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||....  .+....+.++|++++++|+.+++.+++.++|.|.+  .+++|++||..+..+.++...|+++|++++++
T Consensus        76 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  151 (240)
T PRK06101         76 IFNAGDCEY--MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYF  151 (240)
T ss_pred             EEcCccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence            999997533  34456789999999999999999999999999853  47899999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      ++.++.|+..+||++++++||+++|++.......                     .....+|+++|+.++..+....
T Consensus       152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~---------------------~~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFA---------------------MPMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             HHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCC---------------------CCcccCHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999975432100                     0224689999999988886543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=1.3e-32  Score=229.13  Aligned_cols=192  Identities=27%  Similarity=0.312  Sum_probs=174.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHc-
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKF-   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~-   92 (280)
                      -.|++++||||+-|||++.|+.||++|.+|++++|++++++++.+++...  ..++++.+|+++.+.+   .+.+.+.. 
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l~  123 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKLA  123 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHhc
Confidence            34799999999999999999999999999999999999999999998653  5688899999998762   33343333 


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 -GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       ..+.++|||+|...+.|.++.+.+.+.+++.+.+|+.+...+++.++|.|.+++.|.||+++|.++..|.|.++.|+++
T Consensus       124 ~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysas  203 (312)
T KOG1014|consen  124 GLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSAS  203 (312)
T ss_pred             CCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHH
Confidence             2678999999998865688999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCC
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL  210 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~  210 (280)
                      |+.+..|+++|..||..+||.|.++.|..|.|+|..-..
T Consensus       204 K~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  204 KAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC
Confidence            999999999999999999999999999999999976544

>PRK08177 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-31  Score=218.20  Aligned_cols=183  Identities=22%  Similarity=0.264  Sum_probs=157.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |+++||||++|||++++++|+++|++|++++|+.+..+.+.+ +   .++.+..+|++|+++++++++.+.+  +++|++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~---~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~v   75 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L---PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLL   75 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c---cccceEEcCCCCHHHHHHHHHHhhc--CCCCEE
Confidence            789999999999999999999999999999999876654422 2   3566788999999999999988854  489999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC---CCCccchhhHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---LGPHAYTGSKHAV  175 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sK~al  175 (280)
                      |||||+......++.+.+.+++++.+++|+.+++.+++.+++.+.+ ..++++++||..+..+.   ..+..|+++|+++
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~  154 (225)
T PRK08177         76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAAL  154 (225)
T ss_pred             EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHHHHH
Confidence            9999987543356778899999999999999999999999999864 34789999997765432   3567899999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeecccccc
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALA  208 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~  208 (280)
                      +.|++.++.|++++||++++|+||+++|++...
T Consensus       155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        155 NSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             HHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence            999999999999999999999999999998543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.98  E-value=1.6e-31  Score=224.88  Aligned_cols=204  Identities=32%  Similarity=0.396  Sum_probs=167.0

Q ss_pred             HHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCC
Q 023613           34 TVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR  113 (280)
Q Consensus        34 la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~  113 (280)
                      +|+.|+++|++|++++|+.+..+.          ..++.+|+++.++++++++++.   +++|++|||||+...      
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~----------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~------   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL----------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT------   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh----------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC------
Confidence            478999999999999998765321          2357899999999999988774   689999999997521      


Q ss_pred             CCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc---------------------------ccCCCCc
Q 023613          114 EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA---------------------------IGGLGPH  166 (280)
Q Consensus       114 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~---------------------------~~~~~~~  166 (280)
                          +++++.+++|+.+++.+++.++|.|.+  .|+||++||..+.                           .+.+++.
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence                248999999999999999999999854  4899999999876                           2556788


Q ss_pred             cchhhHHHHHHHHHHHH-HHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVA-AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la-~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      .|++||+|++++++.++ .|++++||+||+|+||+++|++.....+....     ...    .+...+.+++.+|+|+|+
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~-----~~~----~~~~~~~~~~~~pe~va~  206 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ-----ERV----DSDAKRMGRPATADEQAA  206 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh-----Hhh----hhcccccCCCCCHHHHHH
Confidence            99999999999999999 99999999999999999999986543221100     000    111123478899999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++|+++...+++|+.+.+|||+..
T Consensus       207 ~~~~l~s~~~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        207 VLVFLCSDAARWINGVNLPVDGGLAA  232 (241)
T ss_pred             HHHHHcChhhcCccCcEEEecCchHH
Confidence            99999998888999999999999764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.98  E-value=3.2e-30  Score=216.23  Aligned_cols=206  Identities=27%  Similarity=0.309  Sum_probs=175.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++.+|++|||||+++||+++|++|+++|+ +|++++|+.+...+      ...++.++.+|+++.+++.++++.    .
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~----~   71 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEA----A   71 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHh----c
Confidence            347899999999999999999999999999 99999998765543      234678899999999998877764    4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++||++|..... .++.+.+.+++++.+++|+.+++.+++++.+.+.+.+.++++++||..+..+.+++..|+++|
T Consensus        72 ~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  150 (238)
T PRK08264         72 SDVTILVNNAGIFRTG-SLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASK  150 (238)
T ss_pred             CCCCEEEECCCcCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHH
Confidence            6899999999984332 678888999999999999999999999999999877789999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.++.++|++++.+.||.++|++.....                        +...+++++++.++..+.
T Consensus       151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~------------------------~~~~~~~~~a~~~~~~~~  206 (238)
T PRK08264        151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD------------------------APKASPADVARQILDALE  206 (238)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC------------------------cCCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999854321                        124566777777776665


Q ss_pred             CC
Q 023613          253 DE  254 (280)
Q Consensus       253 ~~  254 (280)
                      ..
T Consensus       207 ~~  208 (238)
T PRK08264        207 AG  208 (238)
T ss_pred             CC
Confidence            43

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=5.6e-31  Score=208.99  Aligned_cols=162  Identities=35%  Similarity=0.564  Sum_probs=148.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC--cchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQ--DNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~--~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      |++|||||++|||++++++|+++|+ .|++++|+  .+..+++.+.+. ...++.+++||++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999999999965 57889998  666777766664 2367889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.++|    ++.++||++||..+..+.+++..|+++|+|
T Consensus        81 ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaa  154 (167)
T PF00106_consen   81 LDILINNAGIFSD--GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAA  154 (167)
T ss_dssp             ESEEEEECSCTTS--BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHH
T ss_pred             ccccccccccccc--cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHH
Confidence            9999999999875  8899999999999999999999999999999    447999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 023613          175 VLGLNKNVAAEL  186 (280)
Q Consensus       175 l~~~~~~la~e~  186 (280)
                      +++|++++++|+
T Consensus       155 l~~~~~~la~e~  166 (167)
T PF00106_consen  155 LRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=1.2e-29  Score=215.07  Aligned_cols=224  Identities=21%  Similarity=0.197  Sum_probs=185.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   96 (280)
                      .|++|||||+++||+++++.|+++|++|++++|+.+.++...+     ..+..+.||+++.+++..+++.+.+.. +++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-----LGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            3789999999999999999999999999999999877655432     135678899999999999999887754 6899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      .+|||+|....  .++.+.+.+++++.+++|+.+++.+++.+++.+.+.+.+++|++||..+..+.++...|+++|++++
T Consensus        77 ~ii~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~  154 (256)
T PRK08017         77 GLFNNAGFGVY--GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALE  154 (256)
T ss_pred             EEEECCCCCCc--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHH
Confidence            99999998654  6677889999999999999999999999999998877789999999999988899999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  256 (280)
                      .+++.++.++..++++++.+.||.++|++.............    ......     ...+++|+|+++++..+++....
T Consensus       155 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        155 AWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPV----ENPGIA-----ARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccch----hhhHHH-----hhcCCCHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999976553322111000    000000     02358999999999999976654


Q ss_pred             C
Q 023613          257 Y  257 (280)
Q Consensus       257 ~  257 (280)
                      .
T Consensus       226 ~  226 (256)
T PRK08017        226 K  226 (256)
T ss_pred             C
Confidence            3

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.2e-30  Score=215.80  Aligned_cols=226  Identities=23%  Similarity=0.289  Sum_probs=178.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +|++|||||++|||++++++|++.|++|+++.|+.+....+.+.... ..++.++.+|+++++++.++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            68999999999999999999999999999999987766655544432 2467888999999988876543      4899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  .++.+.+.+++++.+++|+.+++.+.+.+++.+.+.+.++||++||..+..+.++...|+++|++++
T Consensus        76 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~  153 (257)
T PRK09291         76 VLLNNAGIGEA--GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALE  153 (257)
T ss_pred             EEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHH
Confidence            99999998765  7788899999999999999999999999999998777789999999998888888899999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      .+++.++.++.+.||++++|+||++.|++.................+... .....+ ....+++|+++.++.++..
T Consensus       154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        154 AIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDP-EDLAFP-LEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhh-hhhhcc-ccCCCHHHHHHHHHHHhcC
Confidence            99999999999999999999999999987543221110000000000000 001111 2447999999999887643

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-29  Score=209.17  Aligned_cols=216  Identities=19%  Similarity=0.198  Sum_probs=178.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |+++||||+++||++++++|+++|++|++++|+.+..+++.+     ..+.++.+|+++.++++++++.+..  +++|++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~v   74 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-----LGAEALALDVADPASVAGLAWKLDG--EALDAA   74 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-----ccceEEEecCCCHHHHHHHHHHhcC--CCCCEE
Confidence            689999999999999999999999999999999776655432     1345789999999999998876642  479999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC---ccchhhHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP---HAYTGSKHAV  175 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~---~~Y~~sK~al  175 (280)
                      |||+|..........+.+.++|++.+++|+.+++.++++++|.|.+ ..+++++++|..+..+....   ..|+++|+++
T Consensus        75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~  153 (222)
T PRK06953         75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKAAL  153 (222)
T ss_pred             EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHHHH
Confidence            9999987432245667799999999999999999999999998855 46899999998776654332   3599999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      +.+++.++.++.  ++++++|+||+++|++.+.                          +...++++.+..++.++....
T Consensus       154 ~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~  205 (222)
T PRK06953        154 NDALRAASLQAR--HATCIALHPGWVRTDMGGA--------------------------QAALDPAQSVAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHhhhcc--CcEEEEECCCeeecCCCCC--------------------------CCCCCHHHHHHHHHHHHHhcC
Confidence            999999998864  6999999999999998542                          223477899999999877777


Q ss_pred             CCeeecEEEeCCccc
Q 023613          256 RYISGTNLMVDGGFT  270 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~  270 (280)
                      ...+|..+.+|++..
T Consensus       206 ~~~~~~~~~~~~~~~  220 (222)
T PRK06953        206 RRDNGRFFQYDGVEL  220 (222)
T ss_pred             cccCceEEeeCCcCC
Confidence            788999999998743

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=212.99  Aligned_cols=204  Identities=19%  Similarity=0.146  Sum_probs=155.4

Q ss_pred             CCccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023613            9 SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus         9 ~~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .|+..+.+++|++|||||++|||+++|++|+++|++|++++|+.......  ... . ...++.+|+++.+++.+     
T Consensus         5 ~~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~~-~-~~~~~~~D~~~~~~~~~-----   75 (245)
T PRK12367          5 DPMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--NDE-S-PNEWIKWECGKEESLDK-----   75 (245)
T ss_pred             chhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hcc-C-CCeEEEeeCCCHHHHHH-----
Confidence            34445678999999999999999999999999999999999986322111  111 1 22567899999987653     


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC---CCceEEEEccccccccCCCC
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ---TKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~isS~~~~~~~~~~  165 (280)
                        .++++|++|||||+..     ..+.+.++|++.+++|+.+++.+++.++|.|.++   ..+.++..+|..+..+ +..
T Consensus        76 --~~~~iDilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~  147 (245)
T PRK12367         76 --QLASLDVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALS  147 (245)
T ss_pred             --hcCCCCEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCC
Confidence              3568999999999743     2346889999999999999999999999999763   2234545556555444 456


Q ss_pred             ccchhhHHHHHHHH---HHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          166 HAYTGSKHAVLGLN---KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       166 ~~Y~~sK~al~~~~---~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ..|++||+|+..+.   +.++.|+...|++|+.++||+++|++..                           ....+|+|
T Consensus       148 ~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~---------------------------~~~~~~~~  200 (245)
T PRK12367        148 PSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP---------------------------IGIMSADF  200 (245)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc---------------------------cCCCCHHH
Confidence            78999999986543   4555566788999999999999998620                           12468999


Q ss_pred             HHHHHHHhcCCCCC
Q 023613          243 VANAVLFLASDEAR  256 (280)
Q Consensus       243 va~~~~~L~s~~~~  256 (280)
                      +|+.+++++.....
T Consensus       201 vA~~i~~~~~~~~~  214 (245)
T PRK12367        201 VAKQILDQANLGLY  214 (245)
T ss_pred             HHHHHHHHHhcCCc
Confidence            99999999976543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4.3e-31  Score=209.82  Aligned_cols=241  Identities=20%  Similarity=0.205  Sum_probs=189.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe--EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAK--VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ..+|++|+||+|+|||..++..+..++-.  +++..|.....+.+.-...  ........|+++..-+.++.+..++..+
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~g--d~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYG--DDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEec--CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            45899999999999999988888877655  4445554433222211111  3455566788888888999999999889


Q ss_pred             CccEEEECCCCCCCCCCCCC--CCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023613           94 TLDIMVNNAGISGAPCPDIR--EADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +.|++|||||...+- ....  ..+.++|++.|+.|+++.+.+.+.++|.+++.+ ++.+|++||.++..|...|+.||+
T Consensus        82 kr~iiI~NAG~lgdv-sk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~  160 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDV-SKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCS  160 (253)
T ss_pred             ceeEEEecCCCccch-hhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhh
Confidence            999999999998653 3333  678889999999999999999999999998875 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+++|++.||.|-. ++|++.++.||.++|+|...........-+....++++.+.     +++++|...|+.+..|
T Consensus       161 ~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~-----~~ll~~~~~a~~l~~L  234 (253)
T KOG1204|consen  161 SKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES-----GQLLDPQVTAKVLAKL  234 (253)
T ss_pred             hHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc-----CCcCChhhHHHHHHHH
Confidence            99999999999999976 79999999999999999876554331111111224443333     8899999999999999


Q ss_pred             cCCCCCCeeecEEEeC
Q 023613          251 ASDEARYISGTNLMVD  266 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~d  266 (280)
                      +.... +.+|+.+...
T Consensus       235 ~e~~~-f~sG~~vdy~  249 (253)
T KOG1204|consen  235 LEKGD-FVSGQHVDYY  249 (253)
T ss_pred             HHhcC-cccccccccc
Confidence            95443 8899988754

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.3e-29  Score=210.80  Aligned_cols=222  Identities=24%  Similarity=0.269  Sum_probs=195.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC---CCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE---PDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +.++|||+++|||.++|..+..+|++|.++.|+..++.+++++++..   .++.+..+|+.|.+++...++++.+..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            78999999999999999999999999999999999999999888653   347789999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      |.+|||||...+  +.+.+.+.++++..+++|+.+.++.+++.++.|++.. .|+|+.+||..+..+..+++.|+++|+|
T Consensus       114 d~l~~cAG~~v~--g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~a  191 (331)
T KOG1210|consen  114 DNLFCCAGVAVP--GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFA  191 (331)
T ss_pred             ceEEEecCcccc--cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHH
Confidence            999999999876  9999999999999999999999999999999998876 5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +.+|+..+++|+.++||+|..+.|+.+.||...+.-...+..           .+.........++||+|++++.=+..
T Consensus       192 lrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~-----------t~ii~g~ss~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  192 LRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEE-----------TKIIEGGSSVIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             HHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchh-----------eeeecCCCCCcCHHHHHHHHHhHHhh
Confidence            999999999999999999999999999999755432222211           11111124558899999999776643

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.7e-28  Score=201.48  Aligned_cols=219  Identities=24%  Similarity=0.295  Sum_probs=178.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .|++|||||+++||+++++.|+++ ++|++++|+.+..+.+.+..   ..+.++.+|+++++++.++++.+    +++|+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~----~~id~   74 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL---PGATPFPVDLTDPEAIAAAVEQL----GRLDV   74 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh---ccceEEecCCCCHHHHHHHHHhc----CCCCE
Confidence            578999999999999999999999 99999999977665554333   24678899999999988877643    58999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      +||++|....  ....+.+.++|++.+++|+.+++.+.+.+++.+.+. .+++|++||..+..+.+++..|+.+|++++.
T Consensus        75 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~  151 (227)
T PRK08219         75 LVHNAGVADL--GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRA  151 (227)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence            9999998654  567788999999999999999999999999988765 5799999999998888889999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCC
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  257 (280)
                      +++.++.++... ++++++.||.++|++........               ....+.+++++++|+|++++++++...  
T Consensus       152 ~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~dva~~~~~~l~~~~--  213 (227)
T PRK08219        152 LADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQE---------------GGEYDPERYLRPETVAKAVRFAVDAPP--  213 (227)
T ss_pred             HHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhh---------------ccccCCCCCCCHHHHHHHHHHHHcCCC--
Confidence            999999998776 99999999999887643321110               001112568999999999999996533  


Q ss_pred             eeecEEEeC
Q 023613          258 ISGTNLMVD  266 (280)
Q Consensus       258 ~~G~~i~~d  266 (280)
                       .|.+++++
T Consensus       214 -~~~~~~~~  221 (227)
T PRK08219        214 -DAHITEVV  221 (227)
T ss_pred             -CCccceEE
Confidence             45555544

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=3.8e-26  Score=203.42  Aligned_cols=197  Identities=19%  Similarity=0.172  Sum_probs=152.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.++...+..  ...+..+.+|++|++++.+.       +++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~--~~~v~~v~~Dvsd~~~v~~~-------l~~  245 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE--DLPVKTLHWQVGQEAALAEL-------LEK  245 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc--CCCeEEEEeeCCCHHHHHHH-------hCC
Confidence            467999999999999999999999999999999999876654332221  13466788999999876543       358


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC----ceEEEEccccccccCCCCccchh
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|++|||||+...     .+.+.+++++.+++|+.+++.++++++|.|++++.    +.++++|+ +.. ..+....|++
T Consensus       246 IDiLInnAGi~~~-----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-~~~~~~~Y~A  318 (406)
T PRK07424        246 VDILIINHGINVH-----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-NPAFSPLYEL  318 (406)
T ss_pred             CCEEEECCCcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc-cCCCchHHHH
Confidence            9999999997532     36788999999999999999999999999976542    34566654 333 3344568999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|+.+++. ++++.  .++.|..+.||++.|++..                           ...++||++|+.++++
T Consensus       319 SKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~---------------------------~~~~spe~vA~~il~~  368 (406)
T PRK07424        319 SKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP---------------------------IGVMSADWVAKQILKL  368 (406)
T ss_pred             HHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc---------------------------CCCCCHHHHHHHHHHH
Confidence            9999999974 44443  4577888899999887621                           1246899999999999


Q ss_pred             cCCCCCC
Q 023613          251 ASDEARY  257 (280)
Q Consensus       251 ~s~~~~~  257 (280)
                      ++...++
T Consensus       369 i~~~~~~  375 (406)
T PRK07424        369 AKRDFRN  375 (406)
T ss_pred             HHCCCCE
Confidence            9876654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=6.1e-25  Score=228.56  Aligned_cols=181  Identities=20%  Similarity=0.216  Sum_probs=156.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcc------------------------------------------
Q 023613           17 VGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDN------------------------------------------   53 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~------------------------------------------   53 (280)
                      +||++|||||++|||.++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5999999999999999999999988 799999999820                                          


Q ss_pred             -----hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhh
Q 023613           54 -----LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN  127 (280)
Q Consensus        54 -----~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n  127 (280)
                           ...+..+.+.. ..++.++.||++|.++++++++++.+. +++|+||||||+...  +.+.+.+.++|++.+++|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~--~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD--KHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC--CCcccCCHHHHHHHHHHH
Confidence                 00111122221 246788999999999999999999877 689999999999866  789999999999999999


Q ss_pred             hHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecccc
Q 023613          128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       128 ~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~  206 (280)
                      +.+.+.+++++.+.+.    ++||++||..+..+.+++..|+++|++++.+++.++.++..  ++|++|+||+++|+|.
T Consensus      2153 v~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~--irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENI----KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPS--AKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             HHHHHHHHHHHHHhCC----CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCC--cEEEEEECCeecCCcc
Confidence            9999999999887543    47999999999999999999999999999999999999754  8999999999999885

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=2.7e-23  Score=165.51  Aligned_cols=174  Identities=20%  Similarity=0.272  Sum_probs=146.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHH---HHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQV---CQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      |+++||||+++||+++++.|+++|+ .|++++|+.+..+..   .+.++ ...++.++.+|++++++++++++.+.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            6799999999999999999999997 578888876543322   12332 234677889999999999999999988889


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++||++|....  ..+.+.+.+++++.+++|+.+++.+.+.+.+    .+.+++++++|..+..+.+++..|+++|+
T Consensus        81 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  154 (180)
T smart00822       81 PLRGVIHAAGVLDD--GLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAANA  154 (180)
T ss_pred             CeeEEEEccccCCc--cccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHHHH
Confidence            99999999998754  5677889999999999999999999998743    34589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeee
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVA  202 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~  202 (280)
                      +++.+++.++    ..|+++.++.||++.
T Consensus       155 ~~~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      155 FLDALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHH----hcCCceEEEeecccc
Confidence            9999887654    357889999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.91  E-value=6.6e-23  Score=179.69  Aligned_cols=217  Identities=19%  Similarity=0.173  Sum_probs=158.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++||++|||||+|+||++++++|+++|  ++|++.+|+......+.+.+. ..++.++.+|++|.+++.++++       
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~l~~~~~-------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP-APCLRFFIGDVRDKERLTRALR-------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC-CCcEEEEEccCCCHHHHHHHHh-------
Confidence            468999999999999999999999986  789999988665444433332 2467889999999998877664       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|+|||+||....   +..+.+   .++.+++|+.+++++++++.+    .+.++||++||.....|   ...|+++|+
T Consensus        74 ~iD~Vih~Ag~~~~---~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~sK~  140 (324)
T TIGR03589        74 GVDYVVHAAALKQV---PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGATKL  140 (324)
T ss_pred             cCCEEEECcccCCC---chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHHHHH
Confidence            69999999997532   122222   357899999999999999886    33469999999765433   468999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh--------ccCCCCCCCHHHHHH
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN--------ANMQGTELTANDVAN  245 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~dva~  245 (280)
                      +.+.+++.++.++...|++++++.||.+.++... ..+          .+.......        ....+.++.++|+++
T Consensus       141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~i~----------~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~  209 (324)
T TIGR03589       141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-VVP----------FFKSLKEEGVTELPITDPRMTRFWITLEQGVN  209 (324)
T ss_pred             HHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-cHH----------HHHHHHHhCCCCeeeCCCCceEeeEEHHHHHH
Confidence            9999999998888888999999999999986421 000          011111111        011135789999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCc
Q 023613          246 AVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      +++.++...   ..|+++ +..|
T Consensus       210 a~~~al~~~---~~~~~~-~~~~  228 (324)
T TIGR03589       210 FVLKSLERM---LGGEIF-VPKI  228 (324)
T ss_pred             HHHHHHhhC---CCCCEE-ccCC
Confidence            999998542   135655 4433

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.91  E-value=8.6e-23  Score=180.86  Aligned_cols=233  Identities=15%  Similarity=0.078  Sum_probs=165.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +++|++|||||+|+||+++++.|+++|++|++++|+.+........+....++.++.+|+++.+++.++++..     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            4689999999999999999999999999999999987654433333322235677899999999998887754     69


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc------------cCC
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI------------GGL  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~------------~~~  163 (280)
                      |+|||+|+....      ..+.+++...+++|+.+.+.+++++...   ...+++|++||.....            +..
T Consensus        77 d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        77 EIVFHLAAQPLV------RKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CEEEECCccccc------ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            999999985321      3455667889999999999999987532   2246899999964321            123


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCC----CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh------hccC
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGK----YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR------NANM  233 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~----~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  233 (280)
                      +...|+++|.+.+.+++.++.++..    .|++++.+.|+.+.++.....   .....   .-.......      ....
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~---~~~~~---~~~~~~~~g~~~~~~~g~~  221 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE---DRLIP---DVIRAFSSNKIVIIRNPDA  221 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh---hhhhH---HHHHHHhcCCCeEECCCCc
Confidence            4578999999999999999988854    489999999999998743110   00000   001111111      1112


Q ss_pred             CCCCCCHHHHHHHHHHhcCCC--CCCeeecEEEeCCc
Q 023613          234 QGTELTANDVANAVLFLASDE--ARYISGTNLMVDGG  268 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i~~dgG  268 (280)
                      ...++..+|++++++.++...  .....|+.+++.+|
T Consensus       222 ~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       222 TRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             ccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            356789999999998877531  11123678998765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=1.2e-22  Score=185.33  Aligned_cols=222  Identities=15%  Similarity=0.162  Sum_probs=163.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----------CCCeEEEecCCCCHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----------EPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~   83 (280)
                      ....||++|||||+|+||++++++|++.|++|++++|+.+.++.+.+.+..          ..++.++.+|+++.+++.+
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            345799999999999999999999999999999999998877766554321          1357889999999888754


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccC
Q 023613           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGG  162 (280)
Q Consensus        84 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~  162 (280)
                             .++++|+||||+|....        ...++...+++|+.+..++++++..    .+.++||++||..+. .+.
T Consensus       156 -------aLggiDiVVn~AG~~~~--------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~  216 (576)
T PLN03209        156 -------ALGNASVVICCIGASEK--------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVGF  216 (576)
T ss_pred             -------HhcCCCEEEEccccccc--------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccCc
Confidence                   34689999999987531        1224778899999999999998765    345799999998764 222


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      +. ..|. +|+++..+.+.+..++...||+++.|+||++.|++.... .....        ... .. ..+.++.++.+|
T Consensus       217 p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t~~v--------~~~-~~-d~~~gr~isreD  283 (576)
T PLN03209        217 PA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ETHNL--------TLS-EE-DTLFGGQVSNLQ  283 (576)
T ss_pred             cc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cccce--------eec-cc-cccCCCccCHHH
Confidence            22 2344 788888888999999999999999999999998864321 00000        000 00 122377899999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      ||+++++|++... ...+.++.+-.|
T Consensus       284 VA~vVvfLasd~~-as~~kvvevi~~  308 (576)
T PLN03209        284 VAELMACMAKNRR-LSYCKVVEVIAE  308 (576)
T ss_pred             HHHHHHHHHcCch-hccceEEEEEeC
Confidence            9999999998432 234566665554

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=9.6e-22  Score=172.45  Aligned_cols=224  Identities=15%  Similarity=0.142  Sum_probs=160.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--C-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--G-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+..+.......  . ..++.++.+|+++.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            37999999999999999999999999999998888765443322221  1 2467888999999998877665       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------  163 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----------  163 (280)
                      ++|+|||+||....      ..+.+.+.+.+++|+.+++++++++.+.+   ..++||++||..+..+..          
T Consensus        77 ~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~  147 (325)
T PLN02989         77 GCETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVD  147 (325)
T ss_pred             CCCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccC
Confidence            68999999996421      23445678999999999999999998754   236999999986643211          


Q ss_pred             ------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc
Q 023613          164 ------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       164 ------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                                  ....|+.+|.+.+.+++.++++   +|+.+..+.|+.+.++........   ...   ..........
T Consensus       148 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~---~~~---~i~~~~~~~~  218 (325)
T PLN02989        148 ETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNF---SVA---VIVELMKGKN  218 (325)
T ss_pred             cCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCc---hHH---HHHHHHcCCC
Confidence                        0246999999999999888766   478999999999999875432110   000   0111111111


Q ss_pred             c---CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          232 N---MQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       232 ~---~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      +   ..+.++.++|+|++++.++....  . ++.++++|+
T Consensus       219 ~~~~~~r~~i~v~Dva~a~~~~l~~~~--~-~~~~ni~~~  255 (325)
T PLN02989        219 PFNTTHHRFVDVRDVALAHVKALETPS--A-NGRYIIDGP  255 (325)
T ss_pred             CCCCcCcCeeEHHHHHHHHHHHhcCcc--c-CceEEEecC
Confidence            1   12468899999999999885432  2 346788655

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.90  E-value=6.6e-23  Score=165.40  Aligned_cols=194  Identities=21%  Similarity=0.290  Sum_probs=167.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-----eEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA-----KVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~-----~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .|++||||++||||.+||.+|.+...     ++++++|+.++.++++..+..     ..++.++.+|+++..++.+..++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            69999999999999999999998753     378899999999999888753     24688899999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCC-------------------------CCCCCHHHHHHHhhhhhHhHHHHHHHHHHhc
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPD-------------------------IREADLSEFEKVFDINVKGVFHGMKHAARIM  142 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~-------------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  142 (280)
                      ++++|+++|.++.|||++..+.-.                         .-..+.++++..|++|++|++.+.+.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            999999999999999998652110                         0134678899999999999999999999999


Q ss_pred             ccCCCceEEEEcccccccc---------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCC
Q 023613          143 IPQTKGTIISICSVAGAIG---------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP  211 (280)
Q Consensus       143 ~~~~~~~iv~isS~~~~~~---------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~  211 (280)
                      ..+.+..+|.+||..+...         ..+..+|..||.+.+-+.-.+-+.+.+.|+.-.+++||..-|.+.....+
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            8777789999999887543         33567999999999999999999999999999999999999988766554

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=1.4e-21  Score=157.05  Aligned_cols=172  Identities=23%  Similarity=0.396  Sum_probs=133.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc---chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           20 VALITGGATGIGESTVRLFHKHGA-KVCIADVQD---NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~---~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++|||||.+|||..++++|+++|. +|++++|+.   ...++..+.+.. ..++.++.||++|++++.++++.+.+++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            799999999999999999999975 599999982   233334444443 468899999999999999999999999899


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      ++.|||+||...+  ..+.+.+.+++++.+..++.+.+++.+.+.+    .+-..+|.+||.++..+.++...|+++.+.
T Consensus        82 i~gVih~ag~~~~--~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   82 IDGVIHAAGVLAD--APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             EEEEEE---------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             cceeeeeeeeecc--cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHH
Confidence            9999999999876  8899999999999999999999999887655    344689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCee
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAV  201 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v  201 (280)
                      ++.|++..+.    .|.++.+|..|..
T Consensus       156 lda~a~~~~~----~g~~~~sI~wg~W  178 (181)
T PF08659_consen  156 LDALARQRRS----RGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHH----TTSEEEEEEE-EB
T ss_pred             HHHHHHHHHh----CCCCEEEEEcccc
Confidence            9999987654    3567888887765

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.87  E-value=2.2e-20  Score=169.80  Aligned_cols=245  Identities=13%  Similarity=0.030  Sum_probs=163.3

Q ss_pred             CCCCccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc---h--------------HHHHHHHh--CCCCC
Q 023613            7 TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN---L--------------GQQVCQSL--GGEPD   67 (280)
Q Consensus         7 ~~~~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~---~--------------~~~~~~~~--~~~~~   67 (280)
                      |..+.....+++|++|||||+|+||++++++|+++|++|++++|...   .              ...+ +..  ....+
T Consensus        36 ~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~  114 (442)
T PLN02572         36 PSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV-RRWKEVSGKE  114 (442)
T ss_pred             CCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHH-HHHHHhhCCc
Confidence            33344566789999999999999999999999999999999864211   0              0111 110  01135


Q ss_pred             eEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC
Q 023613           68 TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK  147 (280)
Q Consensus        68 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  147 (280)
                      +.++.+|++|.+++.++++..     ++|+|||+|+...   ......+.++++..+++|+.+.+++++++...-   ..
T Consensus       115 v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~---~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g---v~  183 (442)
T PLN02572        115 IELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA---PD  183 (442)
T ss_pred             ceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc---ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---CC
Confidence            788999999999988888753     7999999997643   234445566778889999999999999887642   12


Q ss_pred             ceEEEEccccccc------------------------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeec
Q 023613          148 GTIISICSVAGAI------------------------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT  203 (280)
Q Consensus       148 ~~iv~isS~~~~~------------------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T  203 (280)
                      .++|++||....-                        +..+...|+.+|.+.+.+++.+++.   +|+.+..+.|+.+..
T Consensus       184 ~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyG  260 (442)
T PLN02572        184 CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYG  260 (442)
T ss_pred             ccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccC
Confidence            4899999875431                        1112358999999999999887665   579999999999998


Q ss_pred             cccccCC--Cc-------hhhhhhhhhh-HHHHHhhhc-------cCCCCCCCHHHHHHHHHHhcCCCCCCeee--cEEE
Q 023613          204 GLALAHL--PE-------EERTEDAMVG-FRNFVARNA-------NMQGTELTANDVANAVLFLASDEARYISG--TNLM  264 (280)
Q Consensus       204 ~~~~~~~--~~-------~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~dva~~~~~L~s~~~~~~~G--~~i~  264 (280)
                      +......  +.       .......... .........       ...+.++.++|++++++.++....  ..|  .+++
T Consensus       261 p~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~N  338 (442)
T PLN02572        261 VRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFN  338 (442)
T ss_pred             CCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEE
Confidence            8643210  00       0000000000 111111111       111378999999999999885421  234  4677


Q ss_pred             eCCc
Q 023613          265 VDGG  268 (280)
Q Consensus       265 ~dgG  268 (280)
                      +.++
T Consensus       339 igs~  342 (442)
T PLN02572        339 QFTE  342 (442)
T ss_pred             eCCC
Confidence            7543

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.87  E-value=1.5e-20  Score=155.54  Aligned_cols=235  Identities=18%  Similarity=0.087  Sum_probs=170.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           19 RVALITGGATGIGESTVRLFHKHG--AKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +++|||||+|.||.+.++.+.++.  .+|+.++.-. ..-.+....+...+++.|++.|+.|.+.+.+++++-     ++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            468999999999999999999874  3467766532 222222244445578999999999999988887744     89


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-------------cC
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-------------GG  162 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-------------~~  162 (280)
                      |+|+|-|+-.      ..+.+.++.+..+++|+.|.+.|++++..+..+   -|+++||.....-             +.
T Consensus        76 D~VvhfAAES------HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          76 DAVVHFAAES------HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             CeEEEechhc------cccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCC
Confidence            9999999854      357888889999999999999999999988643   5899999654321             23


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      .+.++|+||||+-+.|++++.+.   +|+.+....+.....|.+....--.........+...-.....-..+.|..++|
T Consensus       147 ~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeD  223 (340)
T COG1088         147 NPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVED  223 (340)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHh
Confidence            46789999999999999999888   578999999999888876432211111111111111111111112367899999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCcccccc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      -++++..++....   .|++++++||.-+.|
T Consensus       224 h~~ai~~Vl~kg~---~GE~YNIgg~~E~~N  251 (340)
T COG1088         224 HCRAIDLVLTKGK---IGETYNIGGGNERTN  251 (340)
T ss_pred             HHHHHHHHHhcCc---CCceEEeCCCccchH
Confidence            9999999986532   399999999987643

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=8.5e-20  Score=159.94  Aligned_cols=225  Identities=17%  Similarity=0.147  Sum_probs=156.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..||++|||||+|+||++++++|+++|++|+++.|+....+...+...   ...++.++.+|+++.+++.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            458999999999999999999999999999988887765443322221   12467889999999988877765      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-cC---------
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GG---------  162 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~---------  162 (280)
                       ++|+|||+|+....   ..    .+...+.+++|+.+..++++++...   .+-++||++||..+.. +.         
T Consensus        77 -~~d~vih~A~~~~~---~~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~  145 (322)
T PLN02986         77 -GCDAVFHTASPVFF---TV----KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVV  145 (322)
T ss_pred             -CCCEEEEeCCCcCC---CC----CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCc
Confidence             68999999986421   11    1223568899999999999987642   1236899999986531 11         


Q ss_pred             -------C-----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh
Q 023613          163 -------L-----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       163 -------~-----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                             +     ....|++||.+.+.+++.+.++   +|+++..++|+.+.++..........   ..   ...+....
T Consensus       146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~---~~---~~~~~~g~  216 (322)
T PLN02986        146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNFSV---EL---IVDFINGK  216 (322)
T ss_pred             CcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCccH---HH---HHHHHcCC
Confidence                   0     1356999999999988888766   37999999999999987542211000   00   11111111


Q ss_pred             c---cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          231 A---NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       231 ~---~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      .   .....++.++|+|++++.++....  ..| .++++|+.
T Consensus       217 ~~~~~~~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~~  255 (322)
T PLN02986        217 NLFNNRFYRFVDVRDVALAHIKALETPS--ANG-RYIIDGPI  255 (322)
T ss_pred             CCCCCcCcceeEHHHHHHHHHHHhcCcc--cCC-cEEEecCC
Confidence            0   112468999999999999886432  234 67886553

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.86  E-value=6.9e-20  Score=159.58  Aligned_cols=189  Identities=13%  Similarity=0.057  Sum_probs=141.7

Q ss_pred             CCcEEEEEcCCChHHHH--HHHHHHHcCCeEEEEecCcchH------------HHHHHHhCC-CCCeEEEecCCCCHHHH
Q 023613           17 VGRVALITGGATGIGES--TVRLFHKHGAKVCIADVQDNLG------------QQVCQSLGG-EPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~--la~~l~~~g~~V~~~~r~~~~~------------~~~~~~~~~-~~~~~~~~~D~~~~~~~   81 (280)
                      -+|++||||+++|||.+  +|++| ++|++|+++++..+..            +.+.+.+.. ...+..+.||+++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            37999999999999999  89999 9999988887533211            122223322 23567789999999999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCC---------------CCC-----------------CCCCHHHHHHHhhhhhH
Q 023613           82 CSAVDLTVEKFGTLDIMVNNAGISGAPC---------------PDI-----------------READLSEFEKVFDINVK  129 (280)
Q Consensus        82 ~~~~~~~~~~~~~~d~li~~ag~~~~~~---------------~~~-----------------~~~~~~~~~~~~~~n~~  129 (280)
                      +++++.+.+.+|++|+||||+|......               ..+                 ...+.++++.++.  ++
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~--vM  196 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK--VM  196 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH--hh
Confidence            9999999999999999999999863311               001                 1234444444433  33


Q ss_pred             hH-----HHHHHHHHHhcccCCCceEEEEccccccccCCCC--ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeee
Q 023613          130 GV-----FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVA  202 (280)
Q Consensus       130 ~~-----~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~  202 (280)
                      |.     |.=.....+.|  ..++++|-.|........|.+  +.-+.+|++|++.++.|+.+|++.|+|+|++.+|++.
T Consensus       197 ggedw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~  274 (398)
T PRK13656        197 GGEDWELWIDALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVV  274 (398)
T ss_pred             ccchHHHHHHHHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence            33     22234445555  346899999988888777776  4889999999999999999999999999999999999


Q ss_pred             ccccccCC
Q 023613          203 TGLALAHL  210 (280)
Q Consensus       203 T~~~~~~~  210 (280)
                      |.-.....
T Consensus       275 T~Ass~Ip  282 (398)
T PRK13656        275 TQASSAIP  282 (398)
T ss_pred             chhhhcCC
Confidence            99766553

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.86  E-value=5.6e-20  Score=163.18  Aligned_cols=227  Identities=16%  Similarity=0.101  Sum_probs=157.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEE-EEecCcch--HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNL--GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~-~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      |++|||||+|+||+++++.|.++|+.++ +++|....  ..... .+....++.++.+|++|.+++.++++.     .++
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   75 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PVAQSERFAFEKVDICDRAELARVFTE-----HQP   75 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hcccCCceEEEECCCcChHHHHHHHhh-----cCC
Confidence            5799999999999999999999998855 45554321  11111 111223577889999999998887764     269


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcc---c--CCCceEEEEccccccc----------
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI---P--QTKGTIISICSVAGAI----------  160 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~---~--~~~~~iv~isS~~~~~----------  160 (280)
                      |+|||+||....      ..+.++++..+++|+.+++.+++++.+.+.   +  .+..++|++||.....          
T Consensus        76 D~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         76 DCVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             CEEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            999999987532      234466789999999999999999987532   1  1235899999864321          


Q ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-c----
Q 023613          161 ---GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-N----  232 (280)
Q Consensus       161 ---~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----  232 (280)
                         +..+...|+.||.+.+.+++.+++++   ++++..+.|+.+..+....   .. ....   .+........ .    
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~---~~-~~~~---~~~~~~~~~~~~~~g~  219 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFP---EK-LIPL---MILNALAGKPLPVYGN  219 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCc---cc-HHHH---HHHHHhcCCCceEeCC
Confidence               12345789999999999999998774   6788889999988876421   10 0000   0111111110 0    


Q ss_pred             --CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 --MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 --~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                        ....++.++|+++++..++...   ..|+.+++.+|..
T Consensus       220 g~~~~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~  256 (355)
T PRK10217        220 GQQIRDWLYVEDHARALYCVATTG---KVGETYNIGGHNE  256 (355)
T ss_pred             CCeeeCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCc
Confidence              1246899999999999888542   3578999988864

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=4.6e-20  Score=162.80  Aligned_cols=230  Identities=15%  Similarity=0.024  Sum_probs=153.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++|++|||||+|+||++++++|+++|++|++++|+...     ++.+..... ...++.++.+|++|.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            6779999999999999999999999999999999886532     222211111 1235788999999999998888754


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC-ceEEEEcccccccc------
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIG------  161 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~------  161 (280)
                           ++|+|||+|+....      ....+..+..+++|+.++.++++++.+...+.+. -++|++||....-.      
T Consensus        83 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         83 -----KPDEVYNLAAQSHV------AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             -----CCCEEEECCcccch------hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence                 69999999997542      1223455778899999999999999987643211 27888887532211      


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCC---CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHH-HHHhh----
Q 023613          162 ----GLGPHAYTGSKHAVLGLNKNVAAELGK---YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR-NFVAR----  229 (280)
Q Consensus       162 ----~~~~~~Y~~sK~al~~~~~~la~e~~~---~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~----  229 (280)
                          ..+...|+.||.+.+.+++.++.++.-   .++.++.+.|+...+.     .+..      ...+. .....    
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~-----~~~~------~~~~~~~~~~~~~~~  220 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENF-----VTRK------ITRAVGRIKVGLQKK  220 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCccc-----chhH------HHHHHHHHHcCCCCc
Confidence                113568999999999999999888642   1233344445432211     0000      00000 00000    


Q ss_pred             ----hccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          230 ----NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       230 ----~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                          .......++.++|+|++++.++...    .+..+++.+|..
T Consensus       221 ~~~g~g~~~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~  261 (340)
T PLN02653        221 LFLGNLDASRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEES  261 (340)
T ss_pred             eEeCCCcceecceeHHHHHHHHHHHHhcC----CCCcEEecCCCc
Confidence                0111246799999999999998643    145688877753

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.85  E-value=4.8e-19  Score=157.11  Aligned_cols=223  Identities=17%  Similarity=0.159  Sum_probs=152.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +++++|||||+|+||++++++|+++|++|++++|+.+..+.+...+....++.++.+|+++.+++.++++       ++|
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   81 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------GCD   81 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------CCC
Confidence            4778999999999999999999999999999999876655554444333468889999999988776654       689


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHH--HHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEF--EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG------------  162 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------------  162 (280)
                      +|||+|+..... ......+.+.+  ...++.|+.+.+++++++.+..   ..++||++||.+.....            
T Consensus        82 ~Vih~A~~~~~~-~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~~E  157 (353)
T PLN02896         82 GVFHVAASMEFD-VSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVVDE  157 (353)
T ss_pred             EEEECCccccCC-ccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCccCc
Confidence            999999976431 11122233333  4566778899999999887642   23689999997554210            


Q ss_pred             -------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh-hhhhhhhHHHHH-
Q 023613          163 -------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFV-  227 (280)
Q Consensus       163 -------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~-~~~~~~~~~~~~-  227 (280)
                                   +....|+.||.+.+.+++.++++   +++++..+.|+.+.++......+..-. ............ 
T Consensus       158 ~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~  234 (353)
T PLN02896        158 TCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFS  234 (353)
T ss_pred             ccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccc
Confidence                         11237999999999999988776   479999999999999865433221100 000000000000 


Q ss_pred             --hhh-cc-CCCCCCCHHHHHHHHHHhcCC
Q 023613          228 --ARN-AN-MQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       228 --~~~-~~-~~~~~~~~~dva~~~~~L~s~  253 (280)
                        ... .. ....++.++|+|++++.++..
T Consensus       235 ~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        235 ILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             cccccccccCceeEEeHHHHHHHHHHHHhC
Confidence              000 00 012578999999999998853

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.85  E-value=2.6e-19  Score=157.91  Aligned_cols=217  Identities=18%  Similarity=0.198  Sum_probs=149.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH--HHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC--QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++|++|||||+|+||++++++|+++|++|+++.|+........  ..+....++.++.+|++|.+++.++++       
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------
Confidence            45899999999999999999999999999998888765433222  122222357889999999988776654       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc------------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------  161 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------  161 (280)
                      ++|+|||+|+...     ..  ..+.+.+.+++|+.+..++++++.+.   .+.++||++||.+....            
T Consensus        80 ~~d~vih~A~~~~-----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         80 GCDLVFHVATPVN-----FA--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             cCCEEEEeCCCCc-----cC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceecc
Confidence            6899999998532     11  11234567899999999999998763   12469999999765431            


Q ss_pred             ------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh-hhhhhhhHHHHHh
Q 023613          162 ------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFVA  228 (280)
Q Consensus       162 ------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~  228 (280)
                                  .++...|+.||.+.+.+++.++.+   +|+++..+.|+.+.++......+.... ....... ..+..
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~-~~~~~  225 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITG-NEFLI  225 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcC-Ccccc
Confidence                        123457999999999999888766   579999999999999875332221100 0000000 00000


Q ss_pred             hh-ccC-----CCCCCCHHHHHHHHHHhcCC
Q 023613          229 RN-ANM-----QGTELTANDVANAVLFLASD  253 (280)
Q Consensus       229 ~~-~~~-----~~~~~~~~dva~~~~~L~s~  253 (280)
                      .. ...     ...++.++|++++++.++..
T Consensus       226 ~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        226 NGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             ccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence            00 000     13689999999999998865

>PLN02214 cinnamoyl-CoA reductase

Probab=99.85  E-value=7.4e-19  Score=155.22  Aligned_cols=219  Identities=16%  Similarity=0.179  Sum_probs=154.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH-HHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ-VCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+.... ....+.. ..++.++.+|+++.+++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            568999999999999999999999999999999997654321 1122221 2357788999999988877665       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------  163 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----------  163 (280)
                      ++|+|||+|+...           +++++.+++|+.+..++++++...    +-++||++||..+.++.+          
T Consensus        81 ~~d~Vih~A~~~~-----------~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~avyg~~~~~~~~~~~E  145 (342)
T PLN02214         81 GCDGVFHTASPVT-----------DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAVYMDPNRDPEAVVDE  145 (342)
T ss_pred             cCCEEEEecCCCC-----------CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceeeeccCCCCCCcccCc
Confidence            6999999998531           135788999999999999988753    335899999976544210          


Q ss_pred             -----------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-
Q 023613          164 -----------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-  231 (280)
Q Consensus       164 -----------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  231 (280)
                                 ....|+.+|.+.+.+++.++.+   +|+++..+.|+.+..+.........  ...    +........ 
T Consensus       146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~--~~~----~~~~~~g~~~  216 (342)
T PLN02214        146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINAS--LYH----VLKYLTGSAK  216 (342)
T ss_pred             ccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCch--HHH----HHHHHcCCcc
Confidence                       1246999999999999888776   4799999999999998643211100  000    001111110 


Q ss_pred             ---cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          232 ---NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       232 ---~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                         .....++.++|+|++++.++....   .|+.+++.++
T Consensus       217 ~~~~~~~~~i~V~Dva~a~~~al~~~~---~~g~yn~~~~  253 (342)
T PLN02214        217 TYANLTQAYVDVRDVALAHVLVYEAPS---ASGRYLLAES  253 (342)
T ss_pred             cCCCCCcCeeEHHHHHHHHHHHHhCcc---cCCcEEEecC
Confidence               112468899999999999885432   2345666543

>PLN02650 dihydroflavonol-4-reductase

Probab=99.85  E-value=2.5e-19  Score=158.88  Aligned_cols=212  Identities=19%  Similarity=0.118  Sum_probs=150.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ..|++|||||+|.||++++++|+++|++|+++.|+.+..........   ...++.++.+|+++.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            46789999999999999999999999999999998765544333221   11357888999999988777665       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC----C------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG----L------  163 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~----~------  163 (280)
                      .+|+|||+|+....     ..  .+.+++.+++|+.++.++++++.+..   ..++||++||.....+.    +      
T Consensus        77 ~~d~ViH~A~~~~~-----~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~  146 (351)
T PLN02650         77 GCTGVFHVATPMDF-----ES--KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDC  146 (351)
T ss_pred             CCCEEEEeCCCCCC-----CC--CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCccc
Confidence            68999999986421     11  12246788999999999999987642   13589999997543210    0      


Q ss_pred             ------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh-
Q 023613          164 ------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-  230 (280)
Q Consensus       164 ------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-  230 (280)
                                  +...|+.||.+.+.+++.++++   +|+++..+.|+.+.+|......+..... .    ........ 
T Consensus       147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~-~----~~~~~~~~~  218 (351)
T PLN02650        147 WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLIT-A----LSLITGNEA  218 (351)
T ss_pred             CCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHH-H----HHHhcCCcc
Confidence                        1237999999999999988776   5899999999999999754322211100 0    00000000 


Q ss_pred             ---ccCCCCCCCHHHHHHHHHHhcCC
Q 023613          231 ---ANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       231 ---~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                         ....+.++.++|+|++++.++..
T Consensus       219 ~~~~~~~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        219 HYSIIKQGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             ccCcCCCcceeeHHHHHHHHHHHhcC
Confidence               01125789999999999999864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=2.1e-19  Score=155.70  Aligned_cols=220  Identities=12%  Similarity=0.017  Sum_probs=151.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc--hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN--LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      =++|++|||||+|+||++++++|+++|++|+++.|+..  ........+.. ..++.++.+|++|.+++.+.+.      
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------   77 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------   77 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc------
Confidence            35789999999999999999999999999999988643  22222233321 2357788999999988765543      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-C--------
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-L--------  163 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~--------  163 (280)
                       +.|.++|.++....       .. .++++.+++|+.+++++++++.+.+   ..++||++||..+.... +        
T Consensus        78 -~~d~v~~~~~~~~~-------~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~  145 (297)
T PLN02583         78 -GCSGLFCCFDPPSD-------YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDV  145 (297)
T ss_pred             -CCCEEEEeCccCCc-------cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCC
Confidence             78999987654321       11 2467899999999999999998754   23699999998664211 0        


Q ss_pred             ---CC----------ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh
Q 023613          164 ---GP----------HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       164 ---~~----------~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                         .+          ..|+.||...+.++..++++   .|+++++++|+.+.++......+   ....    ......  
T Consensus       146 ~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~---~~~~----~~~~~~--  213 (297)
T PLN02583        146 DERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNP---YLKG----AAQMYE--  213 (297)
T ss_pred             CcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchh---hhcC----CcccCc--
Confidence               01          15999999999988877665   47999999999999986532111   0000    000000  


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          231 ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      .. ...++.++|+|++++.++...  ...| .+.+-++-
T Consensus       214 ~~-~~~~v~V~Dva~a~~~al~~~--~~~~-r~~~~~~~  248 (297)
T PLN02583        214 NG-VLVTVDVNFLVDAHIRAFEDV--SSYG-RYLCFNHI  248 (297)
T ss_pred             cc-CcceEEHHHHHHHHHHHhcCc--ccCC-cEEEecCC
Confidence            00 124799999999999998632  2334 56665553

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=2e-19  Score=142.52  Aligned_cols=143  Identities=24%  Similarity=0.429  Sum_probs=114.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.+++|+++||||++|||+++|+.|++.|++|++++|+.+..+...+++.. ..+..++.+|+++.+++.++++++.+.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999998776665555532 3456778999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-------CCceEEEEccccccc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-------TKGTIISICSVAGAI  160 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~iv~isS~~~~~  160 (280)
                      +++|++|||||+.... .++++.+.++ ++  .+|+.+.+..++.+.+.|.++       ..||+..||+.+...
T Consensus        92 G~iDilVnnAG~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         92 SRIDMLFQNAGLYKID-SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             CCCCEEEECCCcCCCC-CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            9999999999987642 5555556555 44  666777777888888886654       357888888876543

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.83  E-value=1.4e-18  Score=148.03  Aligned_cols=226  Identities=18%  Similarity=0.120  Sum_probs=165.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH--HHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ--VCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++|+||||+|.||+.|+++|+++|++|..+.|+++..+.  ....+... .+...+..|+.|++++...++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            68999999999999999999999999999999999887544  24444433 468889999999999988777       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-CC--------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LG--------  164 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~--------  164 (280)
                      +.|+|+|.|.....     ...+  .-.+.++..+.|..++++++...   +.-.|||++||.++.... +.        
T Consensus        78 gcdgVfH~Asp~~~-----~~~~--~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   78 GCDGVFHTASPVDF-----DLED--PEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             CCCEEEEeCccCCC-----CCCC--cHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCcccc
Confidence            89999999976532     1111  22379999999999999998764   234799999999998754 21        


Q ss_pred             ---C----------ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh--
Q 023613          165 ---P----------HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--  229 (280)
Q Consensus       165 ---~----------~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--  229 (280)
                         |          ..|+.||...+..+..++.|   .++...+|+|+.|-.|............      ...+++.  
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~------~l~~i~G~~  218 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNA------LLKLIKGLA  218 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHH------HHHHHhccc
Confidence               1          25888887766666665555   3699999999999999877633321111      1122222  


Q ss_pred             --hccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          230 --NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       230 --~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                        ..+....++.++|||.+.++++...  ...|+.+-.+....
T Consensus       219 ~~~~n~~~~~VdVrDVA~AHv~a~E~~--~a~GRyic~~~~~~  259 (327)
T KOG1502|consen  219 ETYPNFWLAFVDVRDVALAHVLALEKP--SAKGRYICVGEVVS  259 (327)
T ss_pred             ccCCCCceeeEeHHHHHHHHHHHHcCc--ccCceEEEecCccc
Confidence              1111234799999999999999544  44577777666554

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.83  E-value=1e-18  Score=154.68  Aligned_cols=234  Identities=15%  Similarity=0.039  Sum_probs=158.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh----CC--CCCeEEEecCCCCHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----GG--EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~--~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ..+++|++|||||+|.||++++++|.++|++|++++|............    ..  ..++.++.+|+.+.+++.++++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            4577899999999999999999999999999999988654322211111    11  1357788999999887766654 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----  162 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----  162 (280)
                            ++|+|||.|+....+      .+.++....+++|+.+..++++.+..    .+-.++|++||.......     
T Consensus        90 ------~~d~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         90 ------NVDYVLHQAALGSVP------RSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             ------CCCEEEECccccCch------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCCC
Confidence                  689999999975321      12233456799999999999998754    334589999987543211     


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-----
Q 023613          163 ------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-----  231 (280)
Q Consensus       163 ------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  231 (280)
                            .+...|+.+|.+.+.+++.++.+   +++++..+.|+.+..+.............   ........+..     
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~---~~~~~~~~~~~i~~~g  227 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIP---RWILSLLKDEPIYING  227 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHH---HHHHHHHcCCCcEEeC
Confidence                  13458999999999999887665   47899999999998886432100000000   00111111110     


Q ss_pred             --cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 --NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 --~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                        .....++..+|+|++++.++........|+++++.+|..
T Consensus       228 ~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~  268 (348)
T PRK15181        228 DGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR  268 (348)
T ss_pred             CCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc
Confidence              112467899999999987764322234688999988754

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=3.2e-18  Score=149.82  Aligned_cols=211  Identities=20%  Similarity=0.192  Sum_probs=146.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---CCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++|++|||||+|+||++++++|+++|++|+++.|+...........   ....++.++.+|+++++++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            4789999999999999999999999999999888765433221111   112467889999999988776665       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-cc-C---------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IG-G---------  162 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~-~---------  162 (280)
                      ++|+|||+|+....   ...    +...+.+++|+.+..++++++....   +-.+||++||.++. ++ .         
T Consensus        76 ~~d~Vih~A~~~~~---~~~----~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~  145 (322)
T PLN02662         76 GCEGVFHTASPFYH---DVT----DPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVD  145 (322)
T ss_pred             CCCEEEEeCCcccC---CCC----ChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCC
Confidence            68999999986431   111    1125788999999999999887532   23589999997532 21 1         


Q ss_pred             ------C-----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc
Q 023613          163 ------L-----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       163 ------~-----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                            |     ....|+.+|.+.+.+++.+.++   +++++..+.|+.+.++...........      ....+.....
T Consensus       146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~------~~~~~~~~~~  216 (322)
T PLN02662        146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAE------AILNLINGAQ  216 (322)
T ss_pred             cccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHH------HHHHHhcCCc
Confidence                  0     0147999999999988877665   479999999999999864321110000      0111111100


Q ss_pred             ---cCCCCCCCHHHHHHHHHHhcCC
Q 023613          232 ---NMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       232 ---~~~~~~~~~~dva~~~~~L~s~  253 (280)
                         .....++.++|+|++++.++..
T Consensus       217 ~~~~~~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        217 TFPNASYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             cCCCCCcCeEEHHHHHHHHHHHhcC
Confidence               1124689999999999998864

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.82  E-value=4.2e-18  Score=150.54  Aligned_cols=229  Identities=12%  Similarity=0.044  Sum_probs=145.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++|||||+|+||++++++|++.|++|++++|+.+.     +..+.+....  ...+.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999987542     2222111111  235788999999999988888754   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------  160 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------  160 (280)
                        ++|+|||+|+....  .    .+.+.-...+++|+.++.++++++.+.-.+ ...++|++||....-           
T Consensus        78 --~~d~ViH~Aa~~~~--~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~  148 (343)
T TIGR01472        78 --KPTEIYNLAAQSHV--K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETT  148 (343)
T ss_pred             --CCCEEEECCccccc--c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCC
Confidence              68999999997543  1    122234567789999999999998874211 124799999864322           


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh--------hcc
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--------NAN  232 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  232 (280)
                      +..+...|+.||.+.+.+++.+++++.   +.+....+..+.++.....+......    ........+        ...
T Consensus       149 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~~~~~~~gp~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~g~  221 (343)
T TIGR01472       149 PFYPRSPYAAAKLYAHWITVNYREAYG---LFAVNGILFNHESPRRGENFVTRKIT----RAAAKIKLGLQEKLYLGNLD  221 (343)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhC---CceEEEeecccCCCCCCccccchHHH----HHHHHHHcCCCCceeeCCCc
Confidence            112456899999999999999988753   22222222112222111100000000    000001001        011


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ....++.++|+|++++.++....    +..+++.+|..
T Consensus       222 ~~rd~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~  255 (343)
T TIGR01472       222 AKRDWGHAKDYVEAMWLMLQQDK----PDDYVIATGET  255 (343)
T ss_pred             cccCceeHHHHHHHHHHHHhcCC----CccEEecCCCc
Confidence            12578999999999998885432    34688877754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.82  E-value=1.9e-18  Score=150.57  Aligned_cols=224  Identities=19%  Similarity=0.133  Sum_probs=153.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +++||||+|+||++++++|++.|  .+|++.+|... ......+.+.....+.++.+|+++++++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            48999999999999999999987  67888876421 11111122222235778899999999988877643     699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc------------CCC
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------GLG  164 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------~~~  164 (280)
                      +|||+|+....      +.+.+.++..+++|+.+...+++++...+.   ..+++++||......            ..+
T Consensus        76 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        76 AVVHFAAESHV------DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             EEEEcccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            99999987532      233456778899999999999998876532   247999998543221            113


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-cC------CCCC
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-NM------QGTE  237 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~  237 (280)
                      ...|+.+|.+.+.+++.++.+   .++++..+.|+.+..+......-. ..      .......+.. ..      ...+
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~-~~------~~~~~~~~~~~~~~~~g~~~~~~  216 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLI-PL------MITNALAGKPLPVYGDGQQVRDW  216 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHH-HH------HHHHHhcCCCceEeCCCceEEee
Confidence            457999999999999998776   468899999999887753221000 00      0111111110 11      1247


Q ss_pred             CCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          238 LTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       238 ~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +.++|+++++..++...   ..|+++++.+|..
T Consensus       217 i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~  246 (317)
T TIGR01181       217 LYVEDHCRAIYLVLEKG---RVGETYNIGGGNE  246 (317)
T ss_pred             EEHHHHHHHHHHHHcCC---CCCceEEeCCCCc
Confidence            88999999999998542   3578899877754

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.81  E-value=2.9e-18  Score=152.02  Aligned_cols=226  Identities=15%  Similarity=0.098  Sum_probs=152.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           20 VALITGGATGIGESTVRLFHKHGAK-VCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++|||||+|+||++++++|+++|+. |+.+++..  ...... ..+....++.++.+|++|.+++.++++.     .++|
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVSDSERYVFEHADICDRAELDRIFAQ-----HQPD   75 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-HhcccCCceEEEEecCCCHHHHHHHHHh-----cCCC
Confidence            5899999999999999999999977 55555532  112222 1222234577889999999998888764     2799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-----CCceEEEEcccccccc----------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----TKGTIISICSVAGAIG----------  161 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~iv~isS~~~~~~----------  161 (280)
                      +|||+|+....      ..+.+..++.+++|+.+...+++++.++|...     +..++|++||......          
T Consensus        76 ~vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         76 AVMHLAAESHV------DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             EEEECCcccCC------cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            99999986532      11223457789999999999999998876321     2248999998643221          


Q ss_pred             -----------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh
Q 023613          162 -----------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       162 -----------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                                 ..+...|+.+|.+.+.+++.++.++   |+++..+.|+.+..+.....   . .....   ......+.
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~---~-~~~~~---~~~~~~~~  219 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPE---K-LIPLV---ILNALEGK  219 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCcc---c-hHHHH---HHHHhcCC
Confidence                       1234689999999999999988774   56677788888877753211   0 00000   01111110


Q ss_pred             c-c------CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          231 A-N------MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 ~-~------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      . .      ....++.++|++++++.++...   ..|+.+++.+|..
T Consensus       220 ~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~  263 (352)
T PRK10084        220 PLPIYGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNE  263 (352)
T ss_pred             CeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCc
Confidence            0 1      1235799999999999888542   2478899887754

>PLN02240 UDP-glucose 4-epimerase

Probab=99.81  E-value=7.7e-18  Score=149.24  Aligned_cols=239  Identities=17%  Similarity=0.165  Sum_probs=154.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH----HHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~----~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+++|++|||||+|+||++++++|+++|++|++++|.....    ....+... ...++.++.+|+++++++.++++.. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            36789999999999999999999999999999988754322    11211111 1235778899999999988877642 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc---------
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---------  160 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------  160 (280)
                          ++|+|||+|+....  .    .+.+++.+.+++|+.++..+++++..    .+..++|++||.....         
T Consensus        81 ----~~d~vih~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         81 ----RFDAVIHFAGLKAV--G----ESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             ----CCCEEEEccccCCc--c----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCC
Confidence                79999999997532  1    23356788999999999999887643    3346899999964321         


Q ss_pred             --cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCch--hhhhhhhhhHHHHHhhhc-----
Q 023613          161 --GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNA-----  231 (280)
Q Consensus       161 --~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----  231 (280)
                        +..+...|+.+|.+.+.+++.++.+.  .++.+..+.++.+..+.........  .........+........     
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV  224 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence              11235689999999999999887652  3567777776655443211111000  000000000111111100     


Q ss_pred             ----------cCCCCCCCHHHHHHHHHHhcCCC--CCCeeecEEEeCCccc
Q 023613          232 ----------NMQGTELTANDVANAVLFLASDE--ARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ----------~~~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i~~dgG~~  270 (280)
                                .....++.++|+|++++.++...  .....|+.+++.+|..
T Consensus       225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~  275 (352)
T PLN02240        225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKG  275 (352)
T ss_pred             eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCc
Confidence                      00124688999999988777431  1234578999887764

>PLN02686 cinnamoyl-CoA reductase

Probab=99.80  E-value=1.3e-17  Score=148.67  Aligned_cols=223  Identities=13%  Similarity=0.087  Sum_probs=150.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--C----CCCeEEEecCCCCHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--G----EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~----~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ..+.++|++|||||+|+||+++++.|+++|++|+++.|+.+..+.+.+...  .    ...+.++.+|++|.+++.++++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            345779999999999999999999999999999988887655444322111  0    1247788999999998877776


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc-ccc----
Q 023613           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIG----  161 (280)
Q Consensus        87 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-~~~----  161 (280)
                             ++|.+||.++....  .....    ..+...++|+.+..++++++...   .+-.++|++||..+ .++    
T Consensus       128 -------~~d~V~hlA~~~~~--~~~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~  191 (367)
T PLN02686        128 -------GCAGVFHTSAFVDP--AGLSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYP  191 (367)
T ss_pred             -------hccEEEecCeeecc--ccccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCC
Confidence                   57899999987543  11111    11344677899999988887642   12358999999631 110    


Q ss_pred             ------------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhH
Q 023613          162 ------------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF  223 (280)
Q Consensus       162 ------------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~  223 (280)
                                        ..+...|+.+|.+.+.+++.++.+   +|+++++++|+.+.+|......+..  .       
T Consensus       192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~--~-------  259 (367)
T PLN02686        192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTA--T-------  259 (367)
T ss_pred             CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChh--H-------
Confidence                              002246999999999999888766   5899999999999999643221110  0       


Q ss_pred             HHHHhhhccC----CCCCCCHHHHHHHHHHhcCCCCCCeeecEE
Q 023613          224 RNFVARNANM----QGTELTANDVANAVLFLASDEARYISGTNL  263 (280)
Q Consensus       224 ~~~~~~~~~~----~~~~~~~~dva~~~~~L~s~~~~~~~G~~i  263 (280)
                      ..........    ...++.++|++++++.++........|+.+
T Consensus       260 ~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y  303 (367)
T PLN02686        260 IAYLKGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRY  303 (367)
T ss_pred             HHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE
Confidence            0111110011    124789999999999888532112245555

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.80  E-value=4.7e-18  Score=152.46  Aligned_cols=226  Identities=19%  Similarity=0.172  Sum_probs=175.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +..+.||++|||||+|.||+++|+++++.+.+ +++.+|++..+-....++..   ..+..++.+|+.|.+.+.++++..
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~  324 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH  324 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence            44579999999999999999999999999765 88999999888877777754   368889999999999998888844


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                           ++|+++|+|+.-+.|  ..    .....+.+++|+.|+.++++++...    +-.++|.+|+.-+..|.   ..|
T Consensus       325 -----kvd~VfHAAA~KHVP--l~----E~nP~Eai~tNV~GT~nv~~aa~~~----~V~~~V~iSTDKAV~Pt---Nvm  386 (588)
T COG1086         325 -----KVDIVFHAAALKHVP--LV----EYNPEEAIKTNVLGTENVAEAAIKN----GVKKFVLISTDKAVNPT---NVM  386 (588)
T ss_pred             -----CCceEEEhhhhccCc--ch----hcCHHHHHHHhhHhHHHHHHHHHHh----CCCEEEEEecCcccCCc---hHh
Confidence                 799999999976542  22    2336788999999999999999874    34689999998887665   689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc-------CCCCCCCHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-------MQGTELTAN  241 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  241 (280)
                      +++|...+.++.+++......+-++.+|.=|.|-...-... |          -|+...++..+       +.+.+++.+
T Consensus       387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSVi-P----------lFk~QI~~GgplTvTdp~mtRyfMTI~  455 (588)
T COG1086         387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVI-P----------LFKKQIAEGGPLTVTDPDMTRFFMTIP  455 (588)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCH-H----------HHHHHHHcCCCccccCCCceeEEEEHH
Confidence            99999999999999887776568899999999866643221 1          12222222211       235678888


Q ss_pred             HHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          242 DVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       242 dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |-++.+++....   .-.|+++.+|=|..
T Consensus       456 EAv~LVlqA~a~---~~gGeifvldMGep  481 (588)
T COG1086         456 EAVQLVLQAGAI---AKGGEIFVLDMGEP  481 (588)
T ss_pred             HHHHHHHHHHhh---cCCCcEEEEcCCCC
Confidence            999988887744   44788888887653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.79  E-value=4.4e-17  Score=143.64  Aligned_cols=234  Identities=16%  Similarity=0.142  Sum_probs=150.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      ++|||||+|+||++++++|+++|++|++++|...........+.  ...++.++.+|++|.+++..+++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            58999999999999999999999999988765332222111111  123467788999999988777653     37999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc------------CCCC
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------GLGP  165 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------~~~~  165 (280)
                      |||+|+....  .    ...+...+.+++|+.++..+++++..    .+.+++|++||......            ..+.
T Consensus        77 vvh~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~  146 (338)
T PRK10675         77 VIHFAGLKAV--G----ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_pred             EEECCccccc--c----chhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence            9999987532  1    12233567889999999998887653    34468999999753211            0235


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchh--hhhhhhhhHHHHHhhhc----------c-
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE--RTEDAMVGFRNFVARNA----------N-  232 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----------~-  232 (280)
                      ..|+.+|.+.+.+++.++++..  ++++..+.|+.+.++.....+....  .................          + 
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence            7899999999999999876643  4677777776665543111111000  00000011111111100          0 


Q ss_pred             ----CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 ----MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ----~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                          ....++.++|+|++++.++........|+++++.+|..
T Consensus       225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~  266 (338)
T PRK10675        225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_pred             CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCc
Confidence                01357999999999988875322223468899987753

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.78  E-value=2.3e-17  Score=144.53  Aligned_cols=212  Identities=19%  Similarity=0.161  Sum_probs=150.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      ++++||||+|+||+.+++.|+++|++|++++|+.+.....    . ...+.++.+|+++.+++.++++       ++|++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~D~~~~~~l~~~~~-------~~d~v   68 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E-GLDVEIVEGDLRDPASLRKAVA-------GCRAL   68 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c-cCCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            4689999999999999999999999999999987643221    1 1257788999999988777665       78999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC---------------
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL---------------  163 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~---------------  163 (280)
                      ||+|+....        ..++++..+++|+.+...+++++..    .+.+++|++||.......+               
T Consensus        69 i~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        69 FHVAADYRL--------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             EEeceeccc--------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            999975421        1124577899999999999998765    3346899999976543211               


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc----CCCCCCC
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN----MQGTELT  239 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  239 (280)
                      ....|+.+|.+.+.+++.++.+   .++++..+.|+.+.++...........       ......+..+    ....++.
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~  206 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRI-------IVDFLNGKMPAYVDTGLNLVH  206 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHH-------HHHHHcCCCceeeCCCcceEE
Confidence            1357999999999999988765   478999999999877653322111100       0111111100    1134788


Q ss_pred             HHHHHHHHHHhcCCCCCCeeecEEEeCC
Q 023613          240 ANDVANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      ++|+|++++.++...   ..|+.+.++|
T Consensus       207 v~D~a~a~~~~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       207 VDDVAEGHLLALERG---RIGERYILGG  231 (328)
T ss_pred             HHHHHHHHHHHHhCC---CCCceEEecC
Confidence            999999998888542   3577887754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.77  E-value=1.9e-17  Score=141.90  Aligned_cols=227  Identities=18%  Similarity=0.189  Sum_probs=156.8

Q ss_pred             EEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           22 LITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        22 lItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      |||||+|.||++|+++|.++|  +.|.+.++.......  ..........++.+|++|++++.++++       +.|+||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~~~~~~~~~Di~d~~~l~~a~~-------g~d~V~   71 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKSGVKEYIQGDITDPESLEEALE-------GVDVVF   71 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcccceeEEEeccccHHHHHHHhc-------CCceEE
Confidence            699999999999999999999  678888876653221  111111233388999999999988777       889999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc---CC-------------
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG---GL-------------  163 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---~~-------------  163 (280)
                      |.|+.....       .....++.+++|+.|.-++++++..    .+-.++|++||.++..+   ..             
T Consensus        72 H~Aa~~~~~-------~~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   72 HTAAPVPPW-------GDYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             EeCcccccc-------CcccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            999876431       1345688999999999999999875    34579999999887654   10             


Q ss_pred             -CCccchhhHHHHHHHHHHHHH-HHCC-CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          164 -GPHAYTGSKHAVLGLNKNVAA-ELGK-YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       164 -~~~~Y~~sK~al~~~~~~la~-e~~~-~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                       ....|+.||+..+.++..... ++.. ..++..+|+|..|..|......+.-.....  .....+......-.-.++++
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~vyV  218 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVR--SGLFLFQIGDGNNLFDFVYV  218 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHH--hcccceeecCCCceECcEeH
Confidence             234899999999999877554 1111 248999999999999976554432211100  00000111111111347889


Q ss_pred             HHHHHHHHHhcCC---C--CCCeeecEEEeCCccc
Q 023613          241 NDVANAVLFLASD---E--ARYISGTNLMVDGGFT  270 (280)
Q Consensus       241 ~dva~~~~~L~s~---~--~~~~~G~~i~~dgG~~  270 (280)
                      +++|++++..+..   .  ...+.|+.+.+..|.-
T Consensus       219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p  253 (280)
T PF01073_consen  219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEP  253 (280)
T ss_pred             HHHHHHHHHHHHHhccccccccCCCcEEEEECCCc
Confidence            9999998765432   2  3567999999877753

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.77  E-value=7.9e-17  Score=140.94  Aligned_cols=234  Identities=16%  Similarity=0.082  Sum_probs=153.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|+||+++++.|.++|++|++++|.................+.++.+|+++.+++.++++.     +++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            37999999999999999999999999888764332222222222112567788999999998887763     4899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  168 (280)
                      |+||....  .    ...++..+.++.|+.+...+++++..    .+..++|++||.......           .+...|
T Consensus        76 ~~ag~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        76 HFAGLIAV--G----ESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             ECccccCc--c----hhhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            99997643  1    12334567889999999999887654    334689999886543211           134679


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh-hhhhhhhHHHHHhhh-c---------c-----
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFVARN-A---------N-----  232 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~---------~-----  232 (280)
                      +.+|++.+.+++.++.+.  .++++..+.|+.+..+........... .......+.....+. .         +     
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999987653  468899999988877642211110000 000000011111100 0         0     


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ....++.++|++++++.++........|+.+++.+|..
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~  261 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQG  261 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCc
Confidence            01347889999999998885432234578888877654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.77  E-value=1.3e-16  Score=134.99  Aligned_cols=211  Identities=15%  Similarity=0.142  Sum_probs=136.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHc-C
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKF-G   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~-~   93 (280)
                      ..+|++|||||+|+||++++++|++.|++|+++.|+.+.......   ....+.++.+|+.+. +++   .+    .+ .
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l---~~----~~~~   84 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKL---VE----AIGD   84 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHH---HH----Hhhc
Confidence            558999999999999999999999999999999998765543321   123578889999983 322   22    22 3


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc---cCCCCccchh
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---GGLGPHAYTG  170 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---~~~~~~~Y~~  170 (280)
                      ++|+||+++|..... .+         ...+++|+.+...+++++..    .+.++||++||.....   +.+....|..
T Consensus        85 ~~d~vi~~~g~~~~~-~~---------~~~~~~n~~~~~~ll~a~~~----~~~~~iV~iSS~~v~g~~~~~~~~~~~~~  150 (251)
T PLN00141         85 DSDAVICATGFRRSF-DP---------FAPWKVDNFGTVNLVEACRK----AGVTRFILVSSILVNGAAMGQILNPAYIF  150 (251)
T ss_pred             CCCEEEECCCCCcCC-CC---------CCceeeehHHHHHHHHHHHH----cCCCEEEEEccccccCCCcccccCcchhH
Confidence            799999999864321 11         11256888888888888643    4457999999986422   2223345666


Q ss_pred             hHHHHHHH-HHHHHHH-HCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          171 SKHAVLGL-NKNVAAE-LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~-~~~la~e-~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      .|.+...+ .+..+.+ +...|++++.|.||++.++..........               ...+...+++++|+|+.++
T Consensus       151 ~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~---------------~~~~~~~~i~~~dvA~~~~  215 (251)
T PLN00141        151 LNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEP---------------EDTLYEGSISRDQVAEVAV  215 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECC---------------CCccccCcccHHHHHHHHH
Confidence            66544333 2333332 45678999999999998765322110000               0001134689999999999


Q ss_pred             HhcCCCCCCeeecEEEeCC
Q 023613          249 FLASDEARYISGTNLMVDG  267 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dg  267 (280)
                      .++....  ..+.++.+-+
T Consensus       216 ~~~~~~~--~~~~~~~~~~  232 (251)
T PLN00141        216 EALLCPE--SSYKVVEIVA  232 (251)
T ss_pred             HHhcChh--hcCcEEEEec
Confidence            9985432  2334444444

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.76  E-value=2.9e-16  Score=139.39  Aligned_cols=227  Identities=15%  Similarity=0.086  Sum_probs=147.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchH---HHHHHHh---CC-----C-CCeEEEecCCCCHHH---HH
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLG---QQVCQSL---GG-----E-PDTFFCHCDVTKEED---VC   82 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~---~~~~~~~---~~-----~-~~~~~~~~D~~~~~~---~~   82 (280)
                      ++|||||+|+||++++++|+++|  ++|++..|+.+..   +.+.+.+   ..     . .++.++.+|++++.-   -.
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999998  6799999876522   1221111   10     1 468889999986521   01


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC
Q 023613           83 SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG  162 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  162 (280)
                      . .+.+   ..++|++||||+....         ...++..+++|+.+...+++.+..    .+..+++++||.......
T Consensus        81 ~-~~~~---~~~~d~vih~a~~~~~---------~~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~~~  143 (367)
T TIGR01746        81 E-WERL---AENVDTIVHNGALVNW---------VYPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVLAAI  143 (367)
T ss_pred             H-HHHH---HhhCCEEEeCCcEecc---------CCcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccccCCc
Confidence            1 1122   2489999999987532         123567788999999998887764    233469999998765331


Q ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHH
Q 023613          163 ----------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF  226 (280)
Q Consensus       163 ----------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~  226 (280)
                                      .....|+.+|.+.+.+++.++.    .|++++.+.||.+.++..................... 
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~-  218 (367)
T TIGR01746       144 DLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLA-  218 (367)
T ss_pred             CCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHH-
Confidence                            1134799999999998876543    3899999999999886322221111111000000000 


Q ss_pred             HhhhccC----CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          227 VARNANM----QGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       227 ~~~~~~~----~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                       ....+.    ...++.++|++++++.++.......+|+++++.++.
T Consensus       219 -~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~  264 (367)
T TIGR01746       219 -LGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPE  264 (367)
T ss_pred             -hCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCC
Confidence             011111    123789999999999998665433458899998863

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.76  E-value=8.1e-17  Score=144.59  Aligned_cols=231  Identities=16%  Similarity=0.116  Sum_probs=151.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++.++||||||+|.||+.++++|+++ |++|++++|+.+....+.....  ...++.++.+|+.|.+.+.++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            45678999999999999999999998 5899999987655443322110  11368889999999988776664      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC---------C
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---------L  163 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---------~  163 (280)
                       ++|+|||+|+....  ....    .+-.+.+..|+.+...+++++...    . .++|++||....-..         +
T Consensus        86 -~~d~ViHlAa~~~~--~~~~----~~~~~~~~~n~~gt~~ll~aa~~~----~-~r~v~~SS~~vYg~~~~~~~~e~~p  153 (386)
T PLN02427         86 -MADLTINLAAICTP--ADYN----TRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDHP  153 (386)
T ss_pred             -cCCEEEEcccccCh--hhhh----hChHHHHHHHHHHHHHHHHHHHhc----C-CEEEEEeeeeeeCCCcCCCCCcccc
Confidence             58999999987532  1111    122345668999999988887542    2 589999996432110         0


Q ss_pred             ------------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCC---Cchhhh
Q 023613          164 ------------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL---PEEERT  216 (280)
Q Consensus       164 ------------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~---~~~~~~  216 (280)
                                              ....|+.+|.+.+.+++.++..   +|+.+..+.|+.+..+......   ......
T Consensus       154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~  230 (386)
T PLN02427        154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV  230 (386)
T ss_pred             cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcccccccccccc
Confidence                                    1236999999999998876544   5799999999999988632110   000000


Q ss_pred             hhhhhh-HHHHHhhhc-------cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          217 EDAMVG-FRNFVARNA-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       217 ~~~~~~-~~~~~~~~~-------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      ...... ......+..       .....++.++|+|++++.++.... ...|+.+++.+|
T Consensus       231 ~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        231 PRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             chHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence            000000 111111111       011358999999999998885421 235788998875

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.76  E-value=3.6e-17  Score=136.57  Aligned_cols=217  Identities=20%  Similarity=0.211  Sum_probs=157.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~  100 (280)
                      ||||||+|.||++++++|.++|+.|+...|+...........    ++.++.+|+.+.+++.++++..     ++|.|||
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~   71 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIH   71 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT----TEEEEESETTSHHHHHHHHHHH-----TESEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc----eEEEEEeecccccccccccccc-----CceEEEE
Confidence            699999999999999999999999888888766554433322    6889999999999998888866     8999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccch
Q 023613          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAYT  169 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~  169 (280)
                      +|+....      ..+.+.....++.|+.+..++++++...    +..+++++||.......           .+...|+
T Consensus        72 ~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   72 LAAFSSN------PESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             EBSSSSH------HHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             eeccccc------cccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc
Confidence            9987521      1233567888999999999988888763    23689999996443222           1346799


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh-------ccCCCCCCCHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-------ANMQGTELTAND  242 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d  242 (280)
                      .+|...+.+++.+.++.   ++++..+.|+.+..+........ .....   .........       ......++.++|
T Consensus       142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D  214 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSS-SFLPS---LIRQALKGKPIKIPGDGSQVRDFIHVDD  214 (236)
T ss_dssp             HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTS-SHHHH---HHHHHHTTSSEEEESTSSCEEEEEEHHH
T ss_pred             ccccccccccccccccc---ccccccccccccccccccccccc-cccch---hhHHhhcCCcccccCCCCCccceEEHHH
Confidence            99999999999998875   78999999999999881111100 00000   011111111       111244689999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEe
Q 023613          243 VANAVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~  265 (280)
                      +|++++.++....  ..|+.+++
T Consensus       215 ~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  215 LAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHHHHHhCCC--CCCCEEEe
Confidence            9999999997654  67777776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.74  E-value=5.5e-16  Score=137.24  Aligned_cols=225  Identities=14%  Similarity=0.113  Sum_probs=149.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCC-CHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT-KEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~d   96 (280)
                      |++|||||+|.||++++++|++. |++|++++|+.+.....    .....+.++.+|+. +.+.+.++++       ++|
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d   70 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL----VNHPRMHFFEGDITINKEWIEYHVK-------KCD   70 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh----ccCCCeEEEeCCCCCCHHHHHHHHc-------CCC
Confidence            46999999999999999999986 69999999876433222    12235788899998 5555544333       799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC--------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------------  162 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--------------  162 (280)
                      +|||+|+...+  ..    ..++.+..+++|+.+..++++++..    .+ .++|++||.......              
T Consensus        71 ~ViH~aa~~~~--~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~  139 (347)
T PRK11908         71 VILPLVAIATP--AT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY  139 (347)
T ss_pred             EEEECcccCCh--HH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence            99999987543  11    1233467789999999998888764    22 589999997432210              


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhh-HHHHHhhhc------
Q 023613          163 ----LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG-FRNFVARNA------  231 (280)
Q Consensus       163 ----~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------  231 (280)
                          .+...|+.+|.+.+.+++.++..   +++.+..+.|+.+..+.................. +..+..+..      
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  216 (347)
T PRK11908        140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDG  216 (347)
T ss_pred             CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecC
Confidence                01236999999999999888765   4788888999998887643211100000000000 111111110      


Q ss_pred             -cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          232 -NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       232 -~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                       .....++.++|++++++.++........|+.+++.++
T Consensus       217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence             0123589999999999998865332245889999775

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.73  E-value=5.2e-16  Score=148.16  Aligned_cols=231  Identities=13%  Similarity=0.088  Sum_probs=154.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH-HHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED-VCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~   91 (280)
                      +-.+++++|||||+|.||++++++|.++ |++|++++|........    .....+.++.+|+++.++ +++++      
T Consensus       311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~~~~~~~~~~gDl~d~~~~l~~~l------  380 (660)
T PRK08125        311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----LGHPRFHFVEGDISIHSEWIEYHI------  380 (660)
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----cCCCceEEEeccccCcHHHHHHHh------
Confidence            3457899999999999999999999986 79999999976533221    112357888999998654 33323      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC---------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---------  162 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---------  162 (280)
                       .++|+|||+|+....  ..    ..++.++.+++|+.+...+++++...    + .++|++||....-..         
T Consensus       381 -~~~D~ViHlAa~~~~--~~----~~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E~~  448 (660)
T PRK08125        381 -KKCDVVLPLVAIATP--IE----YTRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDEDT  448 (660)
T ss_pred             -cCCCEEEECccccCc--hh----hccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCccc
Confidence             379999999997643  11    11234567899999999999988753    2 589999996432110         


Q ss_pred             ------C---CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhh-HHHHHhh---
Q 023613          163 ------L---GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG-FRNFVAR---  229 (280)
Q Consensus       163 ------~---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~---  229 (280)
                            +   +...|+.+|.+.+.+++.++++   +|+++..+.|+.+..+.................. .......   
T Consensus       449 ~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i  525 (660)
T PRK08125        449 SNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI  525 (660)
T ss_pred             cccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCe
Confidence                  1   1236999999999999988766   4689999999999888543211000000000000 0111101   


Q ss_pred             ----hccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          230 ----NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       230 ----~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                          .......++.++|++++++.++........|+.+++.+|.
T Consensus       526 ~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        526 KLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             EEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence                0011245899999999999988643223468899998874

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.72  E-value=4.2e-17  Score=137.69  Aligned_cols=218  Identities=18%  Similarity=0.172  Sum_probs=147.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC---CCCCe----EEEecCCCCHHHHHHHHHHHHHHc
Q 023613           21 ALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG---GEPDT----FFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~---~~~~~----~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ||||||+|.||+++|++|++.+. +++++++++..+-.+.+++.   ...++    ..+.+|++|.+.+++++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999984 69999999998888888773   22233    34578999999888877754    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                       ++|+|+|.|+.-+.  + +.+   +...+.+++|+.|+.++++++...    +-.++|+||+.-+..|.   ..|++||
T Consensus        77 -~pdiVfHaAA~KhV--p-l~E---~~p~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~Pt---nvmGatK  142 (293)
T PF02719_consen   77 -KPDIVFHAAALKHV--P-LME---DNPFEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVNPT---NVMGATK  142 (293)
T ss_dssp             -T-SEEEE------H--H-HHC---CCHHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS-----SHHHHHH
T ss_pred             -CCCEEEEChhcCCC--C-hHH---hCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCCCC---cHHHHHH
Confidence             99999999987543  1 222   246788999999999999999874    34699999998877654   7999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccC-------CCCCCCHHHHHH
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-------QGTELTANDVAN  245 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~  245 (280)
                      ...+.++...+......+.++.+|.-|.|-...-.. .          +-|....++..++       .+.+++++|.++
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSV-i----------p~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~  211 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSV-I----------PLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQ  211 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSC-H----------HHHHHHHHTTSSEEECETT-EEEEE-HHHHHH
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcH-H----------HHHHHHHHcCCcceeCCCCcEEEEecHHHHHH
Confidence            999999999888876667899999999885542111 1          1122222222221       245789999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .++..+...   ..|+++..|=|..
T Consensus       212 Lvl~a~~~~---~~geifvl~mg~~  233 (293)
T PF02719_consen  212 LVLQAAALA---KGGEIFVLDMGEP  233 (293)
T ss_dssp             HHHHHHHH-----TTEEEEE---TC
T ss_pred             HHHHHHhhC---CCCcEEEecCCCC
Confidence            998877432   3578888877654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.71  E-value=7.3e-16  Score=137.52  Aligned_cols=223  Identities=15%  Similarity=0.040  Sum_probs=147.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++|++|||||+|.||+++++.|.++|+.|++++|......   ...  .....++.+|+++.+.+.++++       ++|
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~~~--~~~~~~~~~Dl~d~~~~~~~~~-------~~D   87 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---SED--MFCHEFHLVDLRVMENCLKVTK-------GVD   87 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---ccc--cccceEEECCCCCHHHHHHHHh-------CCC
Confidence            5789999999999999999999999999999998643211   000  1124567899999877655543       789


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc----------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI----------------  160 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~----------------  160 (280)
                      +|||+|+....  .....   .+....+..|+.+..++++++..    .+-.++|++||....-                
T Consensus        88 ~Vih~Aa~~~~--~~~~~---~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~  158 (370)
T PLN02695         88 HVFNLAADMGG--MGFIQ---SNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKESDA  158 (370)
T ss_pred             EEEEcccccCC--ccccc---cCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCcccC
Confidence            99999986532  11111   12245577899999999888754    3345899999864211                


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh--hc------
Q 023613          161 -GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--NA------  231 (280)
Q Consensus       161 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------  231 (280)
                       +..+...|+.+|.+.+.+++.++..   .|+++..+.|+.+..+.............   .........  ..      
T Consensus       159 ~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~g~g  232 (370)
T PLN02695        159 WPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPA---AFCRKALTSTDEFEMWGDG  232 (370)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHH---HHHHHHHcCCCCeEEeCCC
Confidence             2224468999999999999887665   47899999999998875321100000000   001111110  00      


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .....++.++|++++++.++...    .++.+++.+|..
T Consensus       233 ~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~  267 (370)
T PLN02695        233 KQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  267 (370)
T ss_pred             CeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCc
Confidence            01235789999999999887542    256788877643

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.71  E-value=1.2e-15  Score=146.22  Aligned_cols=226  Identities=15%  Similarity=0.083  Sum_probs=153.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKH--GAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~--g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++|+||||||+|.||++++++|.+.  +++|++.+|..  .....+.. .....++.++.+|++|.+.+.+++..    
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~----   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP-SKSSPNFKFVKGDIASADLVNYLLIT----   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh-cccCCCeEEEECCCCChHHHHHHHhh----
Confidence            45789999999999999999999987  67898888753  22222211 11124688899999998877655431    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------  161 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~----------  161 (280)
                       .++|+|||+|+....      +....+..+.+++|+.+...+++++...   ....++|++||......          
T Consensus        79 -~~~D~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~~~  148 (668)
T PLN02260         79 -EGIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVGNH  148 (668)
T ss_pred             -cCCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccCcc
Confidence             389999999997542      1222334577899999999998887542   12368999999653211          


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhH-HHHHhhhc-----
Q 023613          162 ----GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARNA-----  231 (280)
Q Consensus       162 ----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----  231 (280)
                          ..+...|+.+|.+.+.+++.+..+   +++.+..+.|+.+..+.......        ...+ ........     
T Consensus       149 E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~--------i~~~~~~a~~g~~i~i~g  217 (668)
T PLN02260        149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKL--------IPKFILLAMQGKPLPIHG  217 (668)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccH--------HHHHHHHHhCCCCeEEec
Confidence                113468999999999999988766   46889999999998875321100        0001 11111100     


Q ss_pred             --cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 --NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 --~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                        .....++.++|+|++++.++...   ..|+.+++.++..
T Consensus       218 ~g~~~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~  255 (668)
T PLN02260        218 DGSNVRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKE  255 (668)
T ss_pred             CCCceEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCe
Confidence              01134789999999999887532   2478888877653

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.70  E-value=9.2e-15  Score=110.91  Aligned_cols=216  Identities=17%  Similarity=0.171  Sum_probs=169.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC--Cc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--TL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~   95 (280)
                      -.+|+|-||-+.+|.+|+..|-..++.|.-++-.++...         ..-..+..|-+-.|+-+.+++++.+..+  ++
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A---------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekv   73 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA---------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKV   73 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc---------cceEEecCCcchhHHHHHHHHHHHHhhccccc
Confidence            457899999999999999999999999998887765321         1223445666667777888888887663  89


Q ss_pred             cEEEECCCCCCCCCCCCCCC-CHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           96 DIMVNNAGISGAPCPDIREA-DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      |.+++-||.+.-  +....- -.+.-+-+|...+.....-.+.+..++  +.+|-+...+.-++..+.|++..|+.+|+|
T Consensus        74 Dav~CVAGGWAG--GnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HL--K~GGLL~LtGAkaAl~gTPgMIGYGMAKaA  149 (236)
T KOG4022|consen   74 DAVFCVAGGWAG--GNAKSKDLVKNADLMWKQSVWTSAISAKLATTHL--KPGGLLQLTGAKAALGGTPGMIGYGMAKAA  149 (236)
T ss_pred             ceEEEeeccccC--CCcchhhhhhchhhHHHHHHHHHHHHHHHHHhcc--CCCceeeecccccccCCCCcccchhHHHHH
Confidence            999999998754  222211 123345667777777766666666666  346778888888889999999999999999


Q ss_pred             HHHHHHHHHHHHC--CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          175 VLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~--~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +.+++++|+.+-.  +.|--+..|.|-..+|||.++.+|+.++                   +.+...+.+++..+....
T Consensus       150 VHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf-------------------ssWTPL~fi~e~flkWtt  210 (236)
T KOG4022|consen  150 VHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF-------------------SSWTPLSFISEHFLKWTT  210 (236)
T ss_pred             HHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc-------------------cCcccHHHHHHHHHHHhc
Confidence            9999999998764  3577889999999999999999997654                   567888999999999998


Q ss_pred             CCCCCeeecEEEe
Q 023613          253 DEARYISGTNLMV  265 (280)
Q Consensus       253 ~~~~~~~G~~i~~  265 (280)
                      +..+--+|+.+.+
T Consensus       211 ~~~RPssGsLlqi  223 (236)
T KOG4022|consen  211 ETSRPSSGSLLQI  223 (236)
T ss_pred             cCCCCCCCceEEE
Confidence            8888888988875

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.69  E-value=4.9e-15  Score=128.97  Aligned_cols=217  Identities=15%  Similarity=0.107  Sum_probs=141.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH--HcCCccEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE--KFGTLDIM   98 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~~~d~l   98 (280)
                      +|||||+|.||++++++|+++|++++++.|+.......         ..+..+|+.|..+.+.+++.+.+  .++++|+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~V   72 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF---------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAI   72 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH---------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEE
Confidence            79999999999999999999999766665544322111         01234677776666666655542  23589999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCcc
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~  167 (280)
                      ||+|+....  .   ..+   -+..++.|+.+..++++++..    .+ .++|++||......           ..+...
T Consensus        73 ih~A~~~~~--~---~~~---~~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  139 (308)
T PRK11150         73 FHEGACSST--T---EWD---GKYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV  139 (308)
T ss_pred             EECceecCC--c---CCC---hHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence            999986432  1   112   245789999999999998764    22 36999999754221           113467


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhH-HHHHhhhc--------cCCCCCC
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARNA--------NMQGTEL  238 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~  238 (280)
                      |+.+|.+.+.+++.++.+   .++.+..+.|+.+..+............    ..+ ........        .....++
T Consensus       140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~g~~~~~r~~i  212 (308)
T PRK11150        140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVA----FHLNNQLNNGENPKLFEGSENFKRDFV  212 (308)
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhH----HHHHHHHhcCCCCEEecCCCceeeeee
Confidence            999999999998887655   4788999999999887543210000000    001 11111110        0123578


Q ss_pred             CHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          239 TANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       239 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .++|+|++++.++...    .|+.+++.+|..
T Consensus       213 ~v~D~a~a~~~~~~~~----~~~~yni~~~~~  240 (308)
T PRK11150        213 YVGDVAAVNLWFWENG----VSGIFNCGTGRA  240 (308)
T ss_pred             eHHHHHHHHHHHHhcC----CCCeEEcCCCCc
Confidence            9999999998888542    246888877754

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.68  E-value=2.4e-15  Score=136.77  Aligned_cols=219  Identities=13%  Similarity=0.028  Sum_probs=144.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +++++|||||+|.||++++++|.++|++|++++|......+.....-...++.++..|+.+..     +       .++|
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~~D  185 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LEVD  185 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cCCC
Confidence            679999999999999999999999999999988753322111111111245777888987652     1       2689


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc---------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG---------------  161 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------------  161 (280)
                      +|||+|+....  ..    ..++..+.+++|+.+..++++++...    + .++|++||......               
T Consensus       186 ~ViHlAa~~~~--~~----~~~~p~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  254 (442)
T PLN02206        186 QIYHLACPASP--VH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQVETYWGNVN  254 (442)
T ss_pred             EEEEeeeecch--hh----hhcCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHHhCCCCCCCCCccccccCC
Confidence            99999987542  11    11234678999999999999988653    2 38999999764321               


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccC-------
Q 023613          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-------  233 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  233 (280)
                       ......|+.+|.+.+.+++.+.+.   +++++..+.|+.+..+........  ...   ........+....       
T Consensus       255 P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~--~v~---~~i~~~l~~~~i~i~g~G~~  326 (442)
T PLN02206        255 PIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGR--VVS---NFVAQALRKEPLTVYGDGKQ  326 (442)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccc--hHH---HHHHHHHcCCCcEEeCCCCE
Confidence             112357999999999998887665   468888899988877653211000  000   0011111111110       


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...++.++|+|++++.++...    .+..+++.+|..
T Consensus       327 ~rdfi~V~Dva~ai~~a~e~~----~~g~yNIgs~~~  359 (442)
T PLN02206        327 TRSFQFVSDLVEGLMRLMEGE----HVGPFNLGNPGE  359 (442)
T ss_pred             EEeEEeHHHHHHHHHHHHhcC----CCceEEEcCCCc
Confidence            124789999999999888532    234788877653

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.67  E-value=5e-15  Score=128.88  Aligned_cols=216  Identities=22%  Similarity=0.209  Sum_probs=150.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc-cEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL-DIMV   99 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~-d~li   99 (280)
                      +|||||+|.||++++++|.++|+.|+.++|.........      ..+.++.+|+.+.+.+...++       .. |++|
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~-------~~~d~vi   69 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAK-------GVPDAVI   69 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHh-------cCCCEEE
Confidence            899999999999999999999999999999776544322      356678899998855444444       33 9999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------C--CCc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------L--GPH  166 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~--~~~  166 (280)
                      |+|+....+   ....+  .....+.+|+.+..++++++..    .+..++|+.||.+...+.           +  +..
T Consensus        70 h~aa~~~~~---~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~  140 (314)
T COG0451          70 HLAAQSSVP---DSNAS--DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN  140 (314)
T ss_pred             EccccCchh---hhhhh--CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence            999987541   11111  4567899999999999999876    345689996665543321           1  112


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-cCC-------CCCC
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-NMQ-------GTEL  238 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~  238 (280)
                      .|+.+|.+.+.++...+.   ..|+.+..+.|+.+..+......+......    .......... ...       ..++
T Consensus       141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i  213 (314)
T COG0451         141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSA----FIRQLLKGEPIIVIGGDGSQTRDFV  213 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHH----HHHHHHhCCCcceEeCCCceeEeeE
Confidence            499999999999999887   467899999999998887665422211100    0000111111 011       2368


Q ss_pred             CHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          239 TANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       239 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      .++|++++++.++......    .+++.+|.
T Consensus       214 ~v~D~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         214 YVDDVADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             eHHHHHHHHHHHHhCCCCc----EEEeCCCC
Confidence            8999999999999754432    78877774

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.66  E-value=7.2e-15  Score=131.87  Aligned_cols=216  Identities=13%  Similarity=0.098  Sum_probs=142.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH---HHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ---VCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++++|||||+|.||++++++|+++|++|+++.|+......   ..+.......+.++.+|++|++++.++++...   
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~---  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG---  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC---
Confidence            468899999999999999999999999999999998754321   11111112357789999999999988877431   


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||++....  .         ..+.+++|+.+..++++++..    .+-+++|++||.....   +...|..+|
T Consensus       135 ~~~D~Vi~~aa~~~~--~---------~~~~~~vn~~~~~~ll~aa~~----~gv~r~V~iSS~~v~~---p~~~~~~sK  196 (390)
T PLN02657        135 DPVDVVVSCLASRTG--G---------VKDSWKIDYQATKNSLDAGRE----VGAKHFVLLSAICVQK---PLLEFQRAK  196 (390)
T ss_pred             CCCcEEEECCccCCC--C---------CccchhhHHHHHHHHHHHHHH----cCCCEEEEEeeccccC---cchHHHHHH
Confidence            279999999985321  1         123356788888887777653    4456899999987543   345678889


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHH-HhhhccC-CCCCCCHHHHHHHHHHh
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF-VARNANM-QGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~dva~~~~~L  250 (280)
                      ...+...+.     ...+++...+.|+.+..++... ..      ..... ..+ ....... ...+++.+|+|++++.+
T Consensus       197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~-~~------~~~~g-~~~~~~GdG~~~~~~~I~v~DlA~~i~~~  263 (390)
T PLN02657        197 LKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQ-VE------IVKDG-GPYVMFGDGKLCACKPISEADLASFIADC  263 (390)
T ss_pred             HHHHHHHHh-----ccCCCCEEEEccHHHhcccHHH-HH------hhccC-CceEEecCCcccccCceeHHHHHHHHHHH
Confidence            888776543     2357999999998775432110 00      00000 000 0000000 01257899999999988


Q ss_pred             cCCCCCCeeecEEEeCC
Q 023613          251 ASDEARYISGTNLMVDG  267 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dg  267 (280)
                      +...  ...|+++++.|
T Consensus       264 ~~~~--~~~~~~~~Igg  278 (390)
T PLN02657        264 VLDE--SKINKVLPIGG  278 (390)
T ss_pred             HhCc--cccCCEEEcCC
Confidence            8532  23578999876

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.66  E-value=1.1e-14  Score=126.46  Aligned_cols=210  Identities=16%  Similarity=0.093  Sum_probs=137.8

Q ss_pred             EEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEEC
Q 023613           22 LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNN  101 (280)
Q Consensus        22 lItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~  101 (280)
                      |||||+|.||+++++.|.+.|+.|+++.+.                   ..+|+++.++++++++..     ++|+|||+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~   56 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------KELDLTRQADVEAFFAKE-----KPTYVILA   56 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------ccCCCCCHHHHHHHHhcc-----CCCEEEEe
Confidence            699999999999999999999987765432                   147999999887776642     68999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-------------C--C-C
Q 023613          102 AGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------------L--G-P  165 (280)
Q Consensus       102 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-------------~--~-~  165 (280)
                      |+.....   .  ...++.++.++.|+.++..+++.+...    +-.++|++||.....+.             +  + .
T Consensus        57 A~~~~~~---~--~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         57 AAKVGGI---H--ANMTYPADFIRENLQIQTNVIDAAYRH----GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             eeeeccc---c--hhhhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            9874310   0  111233567889999999999888653    34689999996542210             1  1 2


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh---------ccCCCC
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN---------ANMQGT  236 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  236 (280)
                      ..|+.+|.+.+.+++.+.+++   ++++..+.|+.+..+..................+.......         ......
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~  204 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLRE  204 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeec
Confidence            249999999999888876663   68899999999988853110000000000000110000000         011236


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       237 ~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++.++|++++++.++....   .++.+++.+|..
T Consensus       205 ~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~  235 (306)
T PLN02725        205 FLHVDDLADAVVFLMRRYS---GAEHVNVGSGDE  235 (306)
T ss_pred             cccHHHHHHHHHHHHhccc---cCcceEeCCCCc
Confidence            8999999999999886421   335568877654

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.65  E-value=9.9e-15  Score=132.48  Aligned_cols=219  Identities=14%  Similarity=0.043  Sum_probs=144.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +.+++|||||+|.||++++++|.++|++|++++|...........+....++.++..|+.+..     +       .++|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-------~~~D  186 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-------LEVD  186 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-------cCCC
Confidence            467899999999999999999999999999998864322211112222235677888886542     1       2699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc----------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI----------------  160 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~----------------  160 (280)
                      +|||+|+....  ...    ..+-.+.+++|+.+..++++++...    + .++|++||.....                
T Consensus       187 ~ViHlAa~~~~--~~~----~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  255 (436)
T PLN02166        187 QIYHLACPASP--VHY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYWGNVN  255 (436)
T ss_pred             EEEECceeccc--hhh----ccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence            99999987532  111    1234678999999999999888653    2 4899999875321                


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc-------C
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-------M  233 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  233 (280)
                      +......|+.+|.+.+.+++.+.+.   +++.+..+.|+.+..+.......  ....   .....+..+...       .
T Consensus       256 p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~--~~i~---~~i~~~l~~~~i~v~g~g~~  327 (436)
T PLN02166        256 PIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDG--RVVS---NFVAQTIRKQPMTVYGDGKQ  327 (436)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCcc--chHH---HHHHHHhcCCCcEEeCCCCe
Confidence            1112356999999999999887665   46888889998888775321100  0000   001111111110       1


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...++.++|++++++.++...    .+..+++.+|..
T Consensus       328 ~rdfi~V~Dva~ai~~~~~~~----~~giyNIgs~~~  360 (436)
T PLN02166        328 TRSFQYVSDLVDGLVALMEGE----HVGPFNLGNPGE  360 (436)
T ss_pred             EEeeEEHHHHHHHHHHHHhcC----CCceEEeCCCCc
Confidence            135799999999999888532    234788877653

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.65  E-value=1.9e-14  Score=123.85  Aligned_cols=196  Identities=19%  Similarity=0.131  Sum_probs=135.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|.||+++++.|.+.|++|+++.|+                    .+|+.+.+++.++++..     ++|++|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~-----~~d~vi   55 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------QLDLTDPEALERLLRAI-----RPDAVV   55 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------ccCCCCHHHHHHHHHhC-----CCCEEE
Confidence            37999999999999999999999999998884                    37999999988777642     689999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  168 (280)
                      |+|+....  .    ......+..+++|+.+...+++++...    + .++|++||.....+           ..+...|
T Consensus        56 ~~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y  124 (287)
T TIGR01214        56 NTAAYTDV--D----GAESDPEKAFAVNALAPQNLARAAARH----G-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY  124 (287)
T ss_pred             ECCccccc--c----ccccCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence            99986532  1    112345678899999999999987542    2 48999998653211           1134689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc------CCCCCCCHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN------MQGTELTAND  242 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d  242 (280)
                      +.+|.+.+.+++.+       +.++..+.|+.+..+.....+..         .+.....+...      ....++..+|
T Consensus       125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~v~v~D  188 (287)
T TIGR01214       125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVR---------TMLRLAGRGEELRVVDDQIGSPTYAKD  188 (287)
T ss_pred             hHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHH---------HHHHHhhcCCCceEecCCCcCCcCHHH
Confidence            99999998888764       35788999999987763211100         00111111000      1145678999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      +|++++.++...  ...|+.+++.++.
T Consensus       189 va~a~~~~~~~~--~~~~~~~ni~~~~  213 (287)
T TIGR01214       189 LARVIAALLQRL--ARARGVYHLANSG  213 (287)
T ss_pred             HHHHHHHHHhhc--cCCCCeEEEECCC
Confidence            999999988543  1235666665443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.63  E-value=4.5e-14  Score=123.04  Aligned_cols=220  Identities=15%  Similarity=0.075  Sum_probs=141.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      +|||||+|.||+++++.|.++|+ .|++++|..... .+. .+.    ...+..|+.+.+.++.+.+.   .+.++|+||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~----~~~~~~d~~~~~~~~~~~~~---~~~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLA----DLVIADYIDKEDFLDRLEKG---AFGKIEAIF   71 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhh----heeeeccCcchhHHHHHHhh---ccCCCCEEE
Confidence            58999999999999999999998 688887654321 111 111    12456788877666554442   346899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  168 (280)
                      |+|+....        +.++.+..+++|+.+...+++++...    + .++|++||......           ..+...|
T Consensus        72 h~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y  138 (314)
T TIGR02197        72 HQGACSDT--------TETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYASSAATYGDGEAGFREGRELERPLNVY  138 (314)
T ss_pred             ECccccCc--------cccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence            99986421        22345778899999999999987652    2 47999999654321           1145689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc-------------CCC
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-------------MQG  235 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~  235 (280)
                      +.+|.+.+.+++....+. ..++.+..+.|+.+..+............ .  ............             ...
T Consensus       139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~  214 (314)
T TIGR02197       139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVA-F--HLFNQIKAGGNVKLFKSSEGFKDGEQLR  214 (314)
T ss_pred             HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHH-H--HHHHHHhcCCCeEEecCccccCCCCcee
Confidence            999999999987643221 12467888899888777532110000000 0  001111111000             113


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       236 ~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .++..+|++++++.++..    ..+..+++.+|..
T Consensus       215 ~~i~v~D~a~~i~~~~~~----~~~~~yni~~~~~  245 (314)
T TIGR02197       215 DFVYVKDVVDVNLWLLEN----GVSGIFNLGTGRA  245 (314)
T ss_pred             eeEEHHHHHHHHHHHHhc----ccCceEEcCCCCC
Confidence            578999999999999864    2456888877754

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.61  E-value=6.1e-14  Score=122.69  Aligned_cols=206  Identities=13%  Similarity=0.047  Sum_probs=136.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      +++||||+|.||++++++|.++|++|.+..|+.+......     ...+.++.+|+.|++++.+.++       ++|+||
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-----~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi   69 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-----EWGAELVYGDLSLPETLPPSFK-------GVTAII   69 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-----hcCCEEEECCCCCHHHHHHHHC-------CCCEEE
Confidence            6999999999999999999999999999999865432221     1257788999999988766655       789999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      |+++....           +.....++|+.+..++++++..    .+-.++|++||..+..  .+...|..+|...+.+.
T Consensus        70 ~~~~~~~~-----------~~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l  132 (317)
T CHL00194         70 DASTSRPS-----------DLYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKL  132 (317)
T ss_pred             ECCCCCCC-----------CccchhhhhHHHHHHHHHHHHH----cCCCEEEEeccccccc--cCCChHHHHHHHHHHHH
Confidence            98763211           1234566788888888887764    3345899999864321  12356788888877655


Q ss_pred             HHHHHHHCCCCeEEEEEeCCeeeccccccC-CCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCe
Q 023613          180 KNVAAELGKYGIRVNCVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI  258 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  258 (280)
                      +       ..++....+.|+.+...+.... .+..       .....+... ......+++++|+|++++.++...  ..
T Consensus       133 ~-------~~~l~~tilRp~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~l~~~--~~  195 (317)
T CHL00194        133 K-------KSGIPYTIFRLAGFFQGLISQYAIPIL-------EKQPIWITN-ESTPISYIDTQDAAKFCLKSLSLP--ET  195 (317)
T ss_pred             H-------HcCCCeEEEeecHHhhhhhhhhhhhhc-------cCCceEecC-CCCccCccCHHHHHHHHHHHhcCc--cc
Confidence            3       2468888899986533221100 0000       000000000 011135678899999999888543  23


Q ss_pred             eecEEEeCCcccc
Q 023613          259 SGTNLMVDGGFTS  271 (280)
Q Consensus       259 ~G~~i~~dgG~~~  271 (280)
                      .|+++++.|+...
T Consensus       196 ~~~~~ni~g~~~~  208 (317)
T CHL00194        196 KNKTFPLVGPKSW  208 (317)
T ss_pred             cCcEEEecCCCcc
Confidence            5899999887543

>PLN02996 fatty acyl-CoA reductase

Probab=99.61  E-value=1.5e-13  Score=126.69  Aligned_cols=230  Identities=14%  Similarity=0.082  Sum_probs=146.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcc---hHHHHHHHh-------------CC------CCCeE
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDN---LGQQVCQSL-------------GG------EPDTF   69 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~---~V~~~~r~~~---~~~~~~~~~-------------~~------~~~~~   69 (280)
                      -++||+++||||+|.||+.+++.|++.+.   +|++..|...   ..+.+...+             ..      ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            37899999999999999999999997642   4777777542   111111110             00      14688


Q ss_pred             EEecCCCC-------HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhc
Q 023613           70 FCHCDVTK-------EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIM  142 (280)
Q Consensus        70 ~~~~D~~~-------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  142 (280)
                      ++..|+++       .+.++++++       ++|+|||+|+....     .    ++.+..+++|+.+..++++++... 
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~----~~~~~~~~~Nv~gt~~ll~~a~~~-  150 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----D----ERYDVALGINTLGALNVLNFAKKC-  150 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----c----CCHHHHHHHHHHHHHHHHHHHHhc-
Confidence            99999984       333434333       79999999987532     1    246789999999999999987653 


Q ss_pred             ccCCCceEEEEccccccccC------------------------------------------------------------
Q 023613          143 IPQTKGTIISICSVAGAIGG------------------------------------------------------------  162 (280)
Q Consensus       143 ~~~~~~~iv~isS~~~~~~~------------------------------------------------------------  162 (280)
                        ..-.++|++||....-..                                                            
T Consensus       151 --~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (491)
T PLN02996        151 --VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAK  228 (491)
T ss_pred             --CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHH
Confidence              123489999986643110                                                            


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-------cC
Q 023613          163 --LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NM  233 (280)
Q Consensus       163 --~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  233 (280)
                        .....|+.||++.+.+++..+     .++.+..+.|..|..+.........+.......-...+.....       ..
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~  303 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNS  303 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCe
Confidence              012459999999999986542     2799999999999888743321111110000000000111111       11


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCC-CCeeecEEEeCCc
Q 023613          234 QGTELTANDVANAVLFLASDEA-RYISGTNLMVDGG  268 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~~-~~~~G~~i~~dgG  268 (280)
                      ...++.+++++++++.++.... ..-.+.++++.+|
T Consensus       304 ~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        304 VLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             ecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            2567999999999988875421 1124678999887

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.58  E-value=1.7e-13  Score=114.44  Aligned_cols=149  Identities=23%  Similarity=0.209  Sum_probs=117.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +++|||||+|=||++.|.+|++.|+.|++.+.-...-........    ..++..|+.|.+-+++++++-     ++|.|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~----~~f~~gDi~D~~~L~~vf~~~-----~idaV   71 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ----FKFYEGDLLDRALLTAVFEEN-----KIDAV   71 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc----CceEEeccccHHHHHHHHHhc-----CCCEE
Confidence            469999999999999999999999999999886554443333211    568999999999988888755     99999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CCc
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GPH  166 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------------~~~  166 (280)
                      ||.||....      ..+.+..-+-++.|+.+.+.|++++...    +-..+|| ||+++.++.|            +..
T Consensus        72 iHFAa~~~V------gESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vF-SStAavYG~p~~~PI~E~~~~~p~N  140 (329)
T COG1087          72 VHFAASISV------GESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIF-SSTAAVYGEPTTSPISETSPLAPIN  140 (329)
T ss_pred             EECcccccc------chhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEEE-ecchhhcCCCCCcccCCCCCCCCCC
Confidence            999997544      3566777888999999999999887653    3334554 5666666544            446


Q ss_pred             cchhhHHHHHHHHHHHHHHHC
Q 023613          167 AYTGSKHAVLGLNKNVAAELG  187 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~  187 (280)
                      +|+.||.+.+.+.+.+++.+.
T Consensus       141 PYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhCC
Confidence            999999999999999988754

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.56  E-value=2.5e-13  Score=117.88  Aligned_cols=146  Identities=19%  Similarity=0.095  Sum_probs=107.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|.||++++++|.+.| +|+.++|...                .+..|++|.+.+.++++..     ++|+||
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vi   59 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKI-----RPDVIV   59 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhc-----CCCEEE
Confidence            69999999999999999999999 7888887532                2347999999888777743     799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  168 (280)
                      |+|+....  .    ...++-+..+++|+.++.++++++...     +.++|++||.....+           ..+...|
T Consensus        60 h~Aa~~~~--~----~~~~~~~~~~~~N~~~~~~l~~aa~~~-----g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Y  128 (299)
T PRK09987         60 NAAAHTAV--D----KAESEPEFAQLLNATSVEAIAKAANEV-----GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVY  128 (299)
T ss_pred             ECCccCCc--c----hhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEccceEECCCCCCCcCCCCCCCCCCHH
Confidence            99987543  1    122234667789999999999987653     247999998643211           1133579


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccc
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~  205 (280)
                      +.+|.+.+.+++...    .   ....+.|+++..+.
T Consensus       129 g~sK~~~E~~~~~~~----~---~~~ilR~~~vyGp~  158 (299)
T PRK09987        129 GETKLAGEKALQEHC----A---KHLIFRTSWVYAGK  158 (299)
T ss_pred             HHHHHHHHHHHHHhC----C---CEEEEecceecCCC
Confidence            999999999886542    2   24777888887663

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.55  E-value=1.2e-12  Score=125.36  Aligned_cols=225  Identities=18%  Similarity=0.129  Sum_probs=142.2

Q ss_pred             EEEEEcCCChHHHHHHHHHH--HcCCeEEEEecCcch--HHHHHHHhCCCCCeEEEecCCCCHHHH--HHHHHHHHHHcC
Q 023613           20 VALITGGATGIGESTVRLFH--KHGAKVCIADVQDNL--GQQVCQSLGGEPDTFFCHCDVTKEEDV--CSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~--~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~~~~~~~~~~~   93 (280)
                      ++|||||+|.||+++++.|+  +.|++|++++|+...  +....... ...++.++.+|+++++..  ...++.+    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYW-GADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhc-CCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            69999999999999999999  579999999996532  22221111 114688889999985310  1112222    4


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------  162 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------  162 (280)
                      ++|+|||+|+....  .    .   ...+..++|+.+...+++++..    .+..++|++||.......           
T Consensus        77 ~~D~Vih~Aa~~~~--~----~---~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~  143 (657)
T PRK07201         77 DIDHVVHLAAIYDL--T----A---DEEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDE  143 (657)
T ss_pred             CCCEEEECceeecC--C----C---CHHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchh
Confidence            89999999997532  1    1   2356778999999988887654    334689999987653211           


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHh--hhccC-----
Q 023613          163 --LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANM-----  233 (280)
Q Consensus       163 --~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----  233 (280)
                        .....|+.+|...+.+++.      ..++++..+.|+.+..+.....................+..  ...+.     
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG  217 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence              1235799999999988753      24789999999999876422111100000000000000000  00000     


Q ss_pred             -CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          234 -QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 -~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                       ...++..+|+++++..++..  ....|+.+++.++..
T Consensus       218 ~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~  253 (657)
T PRK07201        218 GRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKP  253 (657)
T ss_pred             CeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCC
Confidence             12467899999999998853  345789999877643

>PRK05865 hypothetical protein; Provisional

Probab=99.52  E-value=7.5e-13  Score=127.38  Aligned_cols=187  Identities=16%  Similarity=0.116  Sum_probs=128.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      +++||||+|+||++++++|+++|++|++++|+....      ..  ..+.++.+|+.+.+++.++++       ++|+||
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~--~~v~~v~gDL~D~~~l~~al~-------~vD~VV   66 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WP--SSADFIAADIRDATAVESAMT-------GADVVA   66 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cc--cCceEEEeeCCCHHHHHHHHh-------CCCEEE
Confidence            689999999999999999999999999999875321      11  246788999999998877665       689999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      |+|+...    .           .+++|+.+..++++++..    .+.+++|++||..              |.+.+.++
T Consensus        67 HlAa~~~----~-----------~~~vNv~GT~nLLeAa~~----~gvkr~V~iSS~~--------------K~aaE~ll  113 (854)
T PRK05865         67 HCAWVRG----R-----------NDHINIDGTANVLKAMAE----TGTGRIVFTSSGH--------------QPRVEQML  113 (854)
T ss_pred             ECCCccc----c-----------hHHHHHHHHHHHHHHHHH----cCCCeEEEECCcH--------------HHHHHHHH
Confidence            9997531    1           357899998887776543    4456999999863              77777655


Q ss_pred             HHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCee
Q 023613          180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS  259 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~  259 (280)
                      +    +   +++.+..+.|+.+..+......      .. ......+..........++.++|+|++++.++...  ...
T Consensus       114 ~----~---~gl~~vILRp~~VYGP~~~~~i------~~-ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~--~~~  177 (854)
T PRK05865        114 A----D---CGLEWVAVRCALIFGRNVDNWV------QR-LFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT--VID  177 (854)
T ss_pred             H----H---cCCCEEEEEeceEeCCChHHHH------HH-HhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCC--CcC
Confidence            3    2   4789999999999877411100      00 00000000000000124789999999999887432  224


Q ss_pred             ecEEEeCCccc
Q 023613          260 GTNLMVDGGFT  270 (280)
Q Consensus       260 G~~i~~dgG~~  270 (280)
                      |+.+++.+|..
T Consensus       178 ggvyNIgsg~~  188 (854)
T PRK05865        178 SGPVNLAAPGE  188 (854)
T ss_pred             CCeEEEECCCc
Confidence            56788877654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.50  E-value=7.9e-13  Score=106.26  Aligned_cols=172  Identities=15%  Similarity=0.132  Sum_probs=120.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~  100 (280)
                      |+|+||+|.+|+.++++|.+.|++|.+..|++++.+.       ...+.++.+|+.|++++.+.++       +.|++|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~   66 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALK-------GADAVIH   66 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHT-------TSSEEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhh-------hcchhhh
Confidence            6899999999999999999999999999999987665       3578899999999987766655       8999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC---------ccchhh
Q 023613          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP---------HAYTGS  171 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~---------~~Y~~s  171 (280)
                      ++|...   .        +            ...++.++..+++.+-.+++++|+.......+..         ..|...
T Consensus        67 ~~~~~~---~--------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (183)
T PF13460_consen   67 AAGPPP---K--------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD  123 (183)
T ss_dssp             CCHSTT---T--------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred             hhhhhc---c--------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence            997542   1        1            3334444555555666799999988766543331         234555


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |...+.+.       ...+++...+.|+.+..+.....   .....            ........++.+|+|++++.++
T Consensus       124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~---~~~~~------------~~~~~~~~i~~~DvA~~~~~~l  181 (183)
T PF13460_consen  124 KREAEEAL-------RESGLNWTIVRPGWIYGNPSRSY---RLIKE------------GGPQGVNFISREDVAKAIVEAL  181 (183)
T ss_dssp             HHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSE---EEESS------------TSTTSHCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------HhcCCCEEEEECcEeEeCCCcce---eEEec------------cCCCCcCcCCHHHHHHHHHHHh
Confidence            54444333       22479999999999987753210   00000            0011135689999999999876

...

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.50  E-value=2.5e-12  Score=109.19  Aligned_cols=250  Identities=13%  Similarity=0.091  Sum_probs=178.6

Q ss_pred             CCcEEEEEcC-CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC--
Q 023613           17 VGRVALITGG-ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--   93 (280)
Q Consensus        17 ~~k~vlItGa-~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   93 (280)
                      +..+|||.|. ..-|++.+|..|-++|+-|+++..+.+..+...++-  ..++.....|..++.++...+.+..+...  
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~--~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p   79 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED--RPDIRPLWLDDSDPSSIHASLSRFASLLSRP   79 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc--CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence            3568899996 799999999999999999999999988766654443  35577778888787777777777766543  


Q ss_pred             ------------CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC--CCceEEEEc-cccc
Q 023613           94 ------------TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISIC-SVAG  158 (280)
Q Consensus        94 ------------~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~is-S~~~  158 (280)
                                  .+..||....... +.++++.++.++|.+.++.|+..++.+++.++|++..+  .+.+||.+. |...
T Consensus        80 ~~p~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s  158 (299)
T PF08643_consen   80 HVPFPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS  158 (299)
T ss_pred             CCCCCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence                        4567777776655 45899999999999999999999999999999999872  345655554 6667


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccc--cCCCch-----h------hhhhhh-hhHH
Q 023613          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL--AHLPEE-----E------RTEDAM-VGFR  224 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~--~~~~~~-----~------~~~~~~-~~~~  224 (280)
                      ....|..+.-.....++.+|.+.|++|+.+.||.|.-+..|.++-....  ...+..     +      ...... ..+.
T Consensus       159 sl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~~~~~s~~~~~~~~~se~~~W~~~~r~lY~~~y~  238 (299)
T PF08643_consen  159 SLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGNFGQPSNYKYLSLAGSEVLAWTSIMRALYGPNYS  238 (299)
T ss_pred             ccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccccCCCcccccccccCCCCcccCchhHHhhhchhHH
Confidence            7777888888999999999999999999999999999999998766321  111100     0      000000 0111


Q ss_pred             HHHhhhccC--C-CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          225 NFVARNANM--Q-GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       225 ~~~~~~~~~--~-~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ....+..+.  . ++-.+..+.=.++..++.+..   .|.++.++-|-+.+
T Consensus       239 ~~~~~~~~~~~~~~~Gs~lr~L~~~vfd~~~~~~---~~~v~y~G~Gs~~Y  286 (299)
T PF08643_consen  239 SIQSSAIPAGSGRGKGSSLRELHNAVFDALYGSS---KGSVVYVGRGSRIY  286 (299)
T ss_pred             HHHhhccCCCCCCCCCCHHHHHHHHHHHhhcCCC---CCCEEEEcCceeHH
Confidence            111111111  0 134556677777777775433   78888888776543

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.49  E-value=1.6e-12  Score=109.61  Aligned_cols=155  Identities=21%  Similarity=0.241  Sum_probs=122.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec----CcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADV----QDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++||||||+|-||.+.+.+|.+.|+.|++++.    ..+.++...+.......+.++..|+.|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            689999999999999999999999999999875    34555555555555568999999999999988888866     


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------cC
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------GG  162 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~  162 (280)
                      ++|.|+|-|+....+      .+.+...+-...|+.+.++++..+..    .+...+|+.||....-           +.
T Consensus        77 ~fd~V~Hfa~~~~vg------eS~~~p~~Y~~nNi~gtlnlLe~~~~----~~~~~~V~sssatvYG~p~~ip~te~~~t  146 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG------ESMENPLSYYHNNIAGTLNLLEVMKA----HNVKALVFSSSATVYGLPTKVPITEEDPT  146 (343)
T ss_pred             CCceEEeehhhhccc------hhhhCchhheehhhhhHHHHHHHHHH----cCCceEEEecceeeecCcceeeccCcCCC
Confidence            799999999986542      34444578889999999998887665    4456788887765422           12


Q ss_pred             C-CCccchhhHHHHHHHHHHHHHHHC
Q 023613          163 L-GPHAYTGSKHAVLGLNKNVAAELG  187 (280)
Q Consensus       163 ~-~~~~Y~~sK~al~~~~~~la~e~~  187 (280)
                      . +...|+.+|.+++...+.....+.
T Consensus       147 ~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  147 DQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCcchhhhHHHHHHHHhhhcccc
Confidence            2 567999999999999998877654

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.47  E-value=2.2e-12  Score=109.04  Aligned_cols=160  Identities=16%  Similarity=0.165  Sum_probs=99.8

Q ss_pred             EEcCCChHHHHHHHHHHHcCC--eEEEEecCcch---HHHHHHHhC-----------CCCCeEEEecCCCCHH------H
Q 023613           23 ITGGATGIGESTVRLFHKHGA--KVCIADVQDNL---GQQVCQSLG-----------GEPDTFFCHCDVTKEE------D   80 (280)
Q Consensus        23 ItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~---~~~~~~~~~-----------~~~~~~~~~~D~~~~~------~   80 (280)
                      ||||+|.||..+..+|++.+.  +|++..|..+.   .+++.+.+.           ...++.++..|++++.      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  89998887633   333322221           1358999999999853      3


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc
Q 023613           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI  160 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  160 (280)
                      .+.+.+       .+|+|||+|+.....         ..+++..++|+.+..++++.+..    .+..++++|||.....
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~---------~~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~  140 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN---------APYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAG  140 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS----------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTT
T ss_pred             hhcccc-------ccceeeecchhhhhc---------ccchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccC
Confidence            333322       799999999875421         14566888999999999998763    2223899999832211


Q ss_pred             --c------------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccc
Q 023613          161 --G------------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       161 --~------------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~  205 (280)
                        .                  ......|..||...|.+++..+.+   .|+.+..+.||.+-.+-
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~~  202 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGDS  202 (249)
T ss_dssp             S-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-SS
T ss_pred             CCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccccC
Confidence              1                  012358999999999999988776   46889999999998743

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.46  E-value=1.4e-11  Score=106.74  Aligned_cols=195  Identities=14%  Similarity=0.091  Sum_probs=118.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .+++|||||+|.||++++++|.++|++|+...                       .|+.+.+.+...++.     .++|+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------~~~~~~~~v~~~l~~-----~~~D~   60 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------GRLENRASLEADIDA-----VKPTH   60 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-----------------------CccCCHHHHHHHHHh-----cCCCE
Confidence            36799999999999999999999999986421                       244555555444442     27999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc--------------c---
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA--------------I---  160 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~--------------~---  160 (280)
                      |||+|+....  .. .+...++-.+.+++|+.++.++++++...    + -+.+++||....              .   
T Consensus        61 ViH~Aa~~~~--~~-~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g-v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~  132 (298)
T PLN02778         61 VFNAAGVTGR--PN-VDWCESHKVETIRANVVGTLTLADVCRER----G-LVLTNYATGCIFEYDDAHPLGSGIGFKEED  132 (298)
T ss_pred             EEECCcccCC--CC-chhhhhCHHHHHHHHHHHHHHHHHHHHHh----C-CCEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence            9999997643  11 11223456789999999999999998653    1 234555543211              0   


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc--cCCCCC
Q 023613          161 -GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--NMQGTE  237 (280)
Q Consensus       161 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  237 (280)
                       +.+....|+.+|.+.+.+++.++..   .++|+     +....+-.  ..+. ..       .........  ...+.+
T Consensus       133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~--~~~~-~f-------i~~~~~~~~~~~~~~s~  194 (298)
T PLN02778        133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDL--SNPR-NF-------ITKITRYEKVVNIPNSM  194 (298)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCccc--ccHH-HH-------HHHHHcCCCeeEcCCCC
Confidence             0112368999999999999876432   23443     11111100  0000 00       111111111  111347


Q ss_pred             CCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          238 LTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       238 ~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...+|++++++.++...   .+ ..+++.+|..
T Consensus       195 ~yv~D~v~al~~~l~~~---~~-g~yNigs~~~  223 (298)
T PLN02778        195 TILDELLPISIEMAKRN---LT-GIYNFTNPGV  223 (298)
T ss_pred             EEHHHHHHHHHHHHhCC---CC-CeEEeCCCCc
Confidence            89999999999988542   23 4888866653

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.44  E-value=2.7e-12  Score=111.76  Aligned_cols=231  Identities=15%  Similarity=0.122  Sum_probs=154.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++++|||||+|.+|++++++|.+.+  ..|.+++..+....-..+... ...++.++.+|+.+..++.+.++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            57899999999999999999999998  678888887642111111111 24678899999999877766555       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------  163 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----------  163 (280)
                      +. .+||+|....+      ..-..+-+..+++|+.++.++++.+..    .+-.++|++||.....+..          
T Consensus        76 ~~-~Vvh~aa~~~~------~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   76 GA-VVVHCAASPVP------DFVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             Cc-eEEEeccccCc------cccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCCCC
Confidence            66 67777665432      122225688999999999888888776    4456899999987755422          


Q ss_pred             --C--CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCC
Q 023613          164 --G--PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT  239 (280)
Q Consensus       164 --~--~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
                        .  ...|+.||+-.+.+++..+.   ..+....++.|-.|..|......+.--.....  +...+..........+..
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~--g~~~f~~g~~~~~~~~~~  219 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKIVEALKN--GGFLFKIGDGENLNDFTY  219 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHHHHHHHc--cCceEEeeccccccceEE
Confidence              1  25899999999998877643   45688999999999999877665532111110  000000011111234555


Q ss_pred             HHHHHHHHH----HhcCCCCCCeeecEEEeCCcccc
Q 023613          240 ANDVANAVL----FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       240 ~~dva~~~~----~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .+-|+.+.+    .|. .....++||.+.+..|...
T Consensus       220 ~~Nva~ahilA~~aL~-~~~~~~~Gq~yfI~d~~p~  254 (361)
T KOG1430|consen  220 GENVAWAHILAARALL-DKSPSVNGQFYFITDDTPV  254 (361)
T ss_pred             echhHHHHHHHHHHHH-hcCCccCceEEEEeCCCcc
Confidence            665666542    222 2566889999999887643

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.42  E-value=1.8e-12  Score=111.67  Aligned_cols=197  Identities=16%  Similarity=0.092  Sum_probs=125.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++||||++|-||.+++++|.+.|+.|+.+.|+                    .+|+.|.+++.++++..     ++|+||
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~-----~pd~Vi   56 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS--------------------DLDLTDPEAVAKLLEAF-----KPDVVI   56 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------CS-TTSHHHHHHHHHHH-------SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------hcCCCCHHHHHHHHHHh-----CCCeEe
Confidence            68999999999999999999999999998776                    47999999998888766     799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  168 (280)
                      |+|+....      +.-.++-+..+++|+.++..+.+.+...     +.++|++||.....+.           .+...|
T Consensus        57 n~aa~~~~------~~ce~~p~~a~~iN~~~~~~la~~~~~~-----~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y  125 (286)
T PF04321_consen   57 NCAAYTNV------DACEKNPEEAYAINVDATKNLAEACKER-----GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVY  125 (286)
T ss_dssp             E------H------HHHHHSHHHHHHHHTHHHHHHHHHHHHC-----T-EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred             ccceeecH------HhhhhChhhhHHHhhHHHHHHHHHHHHc-----CCcEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence            99987532      1223446789999999999999988652     4699999997654332           134689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh------hccCCCCCCCHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR------NANMQGTELTAND  242 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d  242 (280)
                      +-+|...+..++..   . +   ....+.++++..+- ...+..     .    +.....+      .....+..+..+|
T Consensus       126 G~~K~~~E~~v~~~---~-~---~~~IlR~~~~~g~~-~~~~~~-----~----~~~~~~~~~~i~~~~d~~~~p~~~~d  188 (286)
T PF04321_consen  126 GRSKLEGEQAVRAA---C-P---NALILRTSWVYGPS-GRNFLR-----W----LLRRLRQGEPIKLFDDQYRSPTYVDD  188 (286)
T ss_dssp             HHHHHHHHHHHHHH-----S---SEEEEEE-SEESSS-SSSHHH-----H----HHHHHHCTSEEEEESSCEE--EEHHH
T ss_pred             HHHHHHHHHHHHHh---c-C---CEEEEecceecccC-CCchhh-----h----HHHHHhcCCeeEeeCCceeCCEEHHH
Confidence            99999999888762   2 2   45677778877661 111110     0    1111111      1112245678999


Q ss_pred             HHHHHHHhcCCCCC-CeeecEEEeCCcc
Q 023613          243 VANAVLFLASDEAR-YISGTNLMVDGGF  269 (280)
Q Consensus       243 va~~~~~L~s~~~~-~~~G~~i~~dgG~  269 (280)
                      +|+.+..|+..... .-.+.++.+.|..
T Consensus       189 lA~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  189 LARVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             HHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             HHHHHHHHHHhcccccccceeEEEecCc
Confidence            99999999854321 1125666666554

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.41  E-value=7.9e-11  Score=93.94  Aligned_cols=172  Identities=16%  Similarity=0.098  Sum_probs=118.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      ++++||||+ |+|.++++.|+++|++|++++|+.+..+.+...+.....+.++.+|++|++++.++++.+.+.++++|++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            368999998 7888899999999999999999987776665545433467788999999999999999999888999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |+.+-...                        +-.+..++...=.+...-+++++-+..+..+                 
T Consensus        80 v~~vh~~~------------------------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------------  118 (177)
T PRK08309         80 VAWIHSSA------------------------KDALSVVCRELDGSSETYRLFHVLGSAASDP-----------------  118 (177)
T ss_pred             EEeccccc------------------------hhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------------
Confidence            98876532                        2222333333222222337887754333211                 


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC-CC
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA-RY  257 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~-~~  257 (280)
                       +..+..+...++.-.-|..|++..+-.                            .||.+-+|+++.++..+.... ..
T Consensus       119 -~~~~~~~~~~~~~~~~i~lgf~~~~~~----------------------------~rwlt~~ei~~gv~~~~~~~~~~~  169 (177)
T PRK08309        119 -RIPSEKIGPARCSYRRVILGFVLEDTY----------------------------SRWLTHEEISDGVIKAIESDADEH  169 (177)
T ss_pred             -hhhhhhhhhcCCceEEEEEeEEEeCCc----------------------------cccCchHHHHHHHHHHHhcCCCeE
Confidence             112223334456667778888754421                            578889999999988886543 35


Q ss_pred             eeec
Q 023613          258 ISGT  261 (280)
Q Consensus       258 ~~G~  261 (280)
                      +.|+
T Consensus       170 ~~g~  173 (177)
T PRK08309        170 VVGT  173 (177)
T ss_pred             EEEE
Confidence            5665

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.41  E-value=2e-12  Score=106.89  Aligned_cols=222  Identities=17%  Similarity=0.110  Sum_probs=153.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH----HHHHH-hCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ----QVCQS-LGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~----~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+|++||||-+|-=|.-+|+.|.+.|+.|....|+.....    .+.+. +....+++.+.+|++|..++.++++.+   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            3799999999999999999999999999999887632211    11111 122346888999999999999999977   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------  160 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------  160 (280)
                        .+|-+.|.|+.+      +...++++.+.+.+++..|.++++.++.-+-  ...-|+...||.. .+           
T Consensus        78 --~PdEIYNLaAQS------~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE-~fG~v~~~pq~E~  146 (345)
T COG1089          78 --QPDEIYNLAAQS------HVGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSE-LYGLVQEIPQKET  146 (345)
T ss_pred             --Cchhheeccccc------cccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHH-hhcCcccCccccC
Confidence              899999999854      4567888889999999999999999886643  2234555555432 22           


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHCC---CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCC
Q 023613          161 -GGLGPHAYTGSKHAVLGLNKNVAAELGK---YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT  236 (280)
Q Consensus       161 -~~~~~~~Y~~sK~al~~~~~~la~e~~~---~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (280)
                       |..+.++|+++|.....++..++..|.-   .||-+|-=+|.-=+|-..++..-.-.....  --...+...+....+.
T Consensus       147 TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~--G~q~~l~lGNldAkRD  224 (345)
T COG1089         147 TPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKL--GLQDKLYLGNLDAKRD  224 (345)
T ss_pred             CCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHc--cccceEEecccccccc
Confidence             2346789999999999999888887643   356666556654444443332111000000  0011122223333477


Q ss_pred             CCCHHHHHHHHHHhcCCC
Q 023613          237 ELTANDVANAVLFLASDE  254 (280)
Q Consensus       237 ~~~~~dva~~~~~L~s~~  254 (280)
                      |..+.|.+++++.++..+
T Consensus       225 WG~A~DYVe~mwlmLQq~  242 (345)
T COG1089         225 WGHAKDYVEAMWLMLQQE  242 (345)
T ss_pred             ccchHHHHHHHHHHHccC
Confidence            999999999999988754

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.40  E-value=1.9e-11  Score=103.00  Aligned_cols=187  Identities=20%  Similarity=0.169  Sum_probs=129.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~  100 (280)
                      +||||++|=+|.+|++.|. .+..|+.++|.+                    +|++|++.+.+++.+.     ++|+|||
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~-----~PDvVIn   56 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE--------------------LDITDPDAVLEVIRET-----RPDVVIN   56 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc--------------------ccccChHHHHHHHHhh-----CCCEEEE
Confidence            8999999999999999999 668899887755                    7999999999888876     9999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------CCccch
Q 023613          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------GPHAYT  169 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----------~~~~Y~  169 (280)
                      +|+....      +.-..+-+..+.+|..++.++.+++...     +.++|++|+.....+..           +...|+
T Consensus        57 ~AAyt~v------D~aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG  125 (281)
T COG1091          57 AAAYTAV------DKAESEPELAFAVNATGAENLARAAAEV-----GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG  125 (281)
T ss_pred             Ccccccc------ccccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence            9998643      2333346899999999999999998653     47899999877654432           346899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      .||.+-+..++...    +   +...+...++......+ +......... .  ..-++.-....+.....+|+|+++..
T Consensus       126 ~sKl~GE~~v~~~~----~---~~~I~Rtswv~g~~g~n-Fv~tml~la~-~--~~~l~vv~Dq~gsPt~~~dlA~~i~~  194 (281)
T COG1091         126 RSKLAGEEAVRAAG----P---RHLILRTSWVYGEYGNN-FVKTMLRLAK-E--GKELKVVDDQYGSPTYTEDLADAILE  194 (281)
T ss_pred             HHHHHHHHHHHHhC----C---CEEEEEeeeeecCCCCC-HHHHHHHHhh-c--CCceEEECCeeeCCccHHHHHHHHHH
Confidence            99999999887653    2   23334444544443211 1110000000 0  00000111123667899999999999


Q ss_pred             hcCCCC
Q 023613          250 LASDEA  255 (280)
Q Consensus       250 L~s~~~  255 (280)
                      |+....
T Consensus       195 ll~~~~  200 (281)
T COG1091         195 LLEKEK  200 (281)
T ss_pred             HHhccc
Confidence            886654

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.39  E-value=4.9e-12  Score=104.60  Aligned_cols=232  Identities=14%  Similarity=0.075  Sum_probs=157.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecC-cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKH--GAKVCIADVQ-DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~--g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +.|.++||||.+.||...++.++..  .++.+..+.- --.-.+..+......+..++..|+.++..+..+++.     .
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~   79 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----E   79 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhcc-----C
Confidence            3489999999999999999999976  4554443321 111133334445557899999999998877665552     3


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc------------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------  161 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------  161 (280)
                      ++|.|||-|...+.      +.+.-+--..++.|+.+...|++.+....   +-.++|++|+....-.            
T Consensus        80 ~id~vihfaa~t~v------d~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~  150 (331)
T KOG0747|consen   80 EIDTVIHFAAQTHV------DRSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASL  150 (331)
T ss_pred             chhhhhhhHhhhhh------hhhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCcccccccccccc
Confidence            89999999987643      33444456677899999999999887753   3368999998765322            


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccC-CCCCCCH
Q 023613          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-QGTELTA  240 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  240 (280)
                      .-+...|+++|+|.+++.+++.+.   +|+.+..+..+.|..|.+....--..+..-. ....+...+...+ .+.++.+
T Consensus       151 ~nPtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~nnVYGP~q~~~klipkFi~l~-~~~~~~~i~g~g~~~rs~l~v  226 (331)
T KOG0747|consen  151 LNPTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRMNNVYGPNQYPEKLIPKFIKLA-MRGKEYPIHGDGLQTRSYLYV  226 (331)
T ss_pred             CCCCCchHHHHHHHHHHHHHHhhc---cCCcEEEEeccCccCCCcChHHHhHHHHHHH-HhCCCcceecCcccceeeEeH
Confidence            113468999999999999999766   5789999999999888754321111000000 0011111111111 2567899


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      +|+++++...+...   -.|+++++.--.
T Consensus       227 eD~~ea~~~v~~Kg---~~geIYNIgtd~  252 (331)
T KOG0747|consen  227 EDVSEAFKAVLEKG---ELGEIYNIGTDD  252 (331)
T ss_pred             HHHHHHHHHHHhcC---CccceeeccCcc
Confidence            99999998888552   268999876543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.36  E-value=1.4e-10  Score=119.92  Aligned_cols=230  Identities=14%  Similarity=0.031  Sum_probs=142.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC----CeEEEEecCcchHHH---HHHHhC--------CCCCeEEEecCCCCHHHH-
Q 023613           18 GRVALITGGATGIGESTVRLFHKHG----AKVCIADVQDNLGQQ---VCQSLG--------GEPDTFFCHCDVTKEEDV-   81 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g----~~V~~~~r~~~~~~~---~~~~~~--------~~~~~~~~~~D~~~~~~~-   81 (280)
                      .++++|||++|.||..+++.|++.+    .+|+...|.......   +.+...        ...++.++.+|++++.-- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5899999999999999999999887    778888887543222   211110        013688899999754100 


Q ss_pred             -HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc
Q 023613           82 -CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI  160 (280)
Q Consensus        82 -~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  160 (280)
                       ....+++   ...+|++||+|+....      ..   .+......|+.+..++++.+..    .+..+++++||.+...
T Consensus      1051 ~~~~~~~l---~~~~d~iiH~Aa~~~~------~~---~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443      1051 SDEKWSDL---TNEVDVIIHNGALVHW------VY---PYSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSALD 1114 (1389)
T ss_pred             CHHHHHHH---HhcCCEEEECCcEecC------cc---CHHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeeecC
Confidence             0112222   1379999999986532      12   2344556799999999988754    2335899999965431


Q ss_pred             c-----------------C-----------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc
Q 023613          161 G-----------------G-----------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE  212 (280)
Q Consensus       161 ~-----------------~-----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~  212 (280)
                      .                 .           .....|+.||.+.+.+++..+.    .|+++..+.||.+..+........
T Consensus      1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~ 1190 (1389)
T TIGR03443      1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNT 1190 (1389)
T ss_pred             cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCc
Confidence            1                 0           0124699999999998876532    489999999999987743322111


Q ss_pred             hhhhhhhhhhHHHHHhhhcc---CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          213 EERTEDAMVGFRNFVARNAN---MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      .............  ....+   ....++.+++++++++.++........+.++++.++.
T Consensus      1191 ~~~~~~~~~~~~~--~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1191 DDFLLRMLKGCIQ--LGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             hhHHHHHHHHHHH--hCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            1111110000000  00001   1245788999999999998643222334567776653

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.31  E-value=1.9e-10  Score=99.01  Aligned_cols=211  Identities=18%  Similarity=0.090  Sum_probs=118.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~  100 (280)
                      +|||||+|.||.++++.|++.|++|++++|+.+......       ...+  .|+.. .       ...+.+.++|+|||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~--~~~~~-~-------~~~~~~~~~D~Vvh   63 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-------WEGY--KPWAP-L-------AESEALEGADAVIN   63 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-------ceee--ecccc-c-------chhhhcCCCCEEEE
Confidence            589999999999999999999999999999876532211       0011  12221 1       11223458999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CCccc
Q 023613          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GPHAY  168 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------------~~~~Y  168 (280)
                      +|+....    ....+.+..+..+++|+.+...+++++...=  .....+++.|+.. .++..            ....|
T Consensus        64 ~a~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~~~~~  136 (292)
T TIGR01777        64 LAGEPIA----DKRWTEERKQEIRDSRIDTTRALVEAIAAAE--QKPKVFISASAVG-YYGTSEDRVFTEEDSPAGDDFL  136 (292)
T ss_pred             CCCCCcc----cccCCHHHHHHHHhcccHHHHHHHHHHHhcC--CCceEEEEeeeEE-EeCCCCCCCcCcccCCCCCChH
Confidence            9996432    1223445567788999999988888876531  1112344444432 22211            11112


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHH---hhhccCCCCCCCHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV---ARNANMQGTELTANDVAN  245 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~  245 (280)
                      ...+...+...+    .+...++.+..+.|+.+..+... ..+.   ...   ......   .........++.++|+|+
T Consensus       137 ~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~---~~~---~~~~~~~~~~g~~~~~~~~i~v~Dva~  205 (292)
T TIGR01777       137 AELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAK---MLP---PFRLGLGGPLGSGRQWFSWIHIEDLVQ  205 (292)
T ss_pred             HHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhHH---HHH---HHhcCcccccCCCCcccccEeHHHHHH
Confidence            222323332222    22335799999999999877321 1110   000   000000   000111246799999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCcc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      +++.++....  .. ..+++.++.
T Consensus       206 ~i~~~l~~~~--~~-g~~~~~~~~  226 (292)
T TIGR01777       206 LILFALENAS--IS-GPVNATAPE  226 (292)
T ss_pred             HHHHHhcCcc--cC-CceEecCCC
Confidence            9999985432  23 356665543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.29  E-value=4.8e-11  Score=98.77  Aligned_cols=209  Identities=18%  Similarity=0.136  Sum_probs=143.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+.+++++||||+|.||++||..|..+|+.|++++--................+..+..|+..+     ++.       .
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~-------e   91 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK-------E   91 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH-------H
Confidence            3578999999999999999999999999999998876555444444444456677777787655     233       6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-------------
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-------------  161 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------------  161 (280)
                      +|.++|.|+..+++  .+..-    --+++.+|+.+.+..+..+.+-     +.|+++.|+... ++             
T Consensus        92 vD~IyhLAapasp~--~y~~n----pvktIktN~igtln~lglakrv-----~aR~l~aSTseV-Ygdp~~hpq~e~ywg  159 (350)
T KOG1429|consen   92 VDQIYHLAAPASPP--HYKYN----PVKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEV-YGDPLVHPQVETYWG  159 (350)
T ss_pred             hhhhhhhccCCCCc--ccccC----ccceeeecchhhHHHHHHHHHh-----CceEEEeecccc-cCCcccCCCcccccc
Confidence            78899999988762  22222    3568899999999888776543     468888877553 32             


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh--------
Q 023613          162 ----GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--------  229 (280)
Q Consensus       162 ----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--------  229 (280)
                          ....++|...|.+.+.|+..+.++   .||.+....+-.+..|...-.-+.--      -.+.....+        
T Consensus       160 ~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvv------snf~~q~lr~epltv~g  230 (350)
T KOG1429|consen  160 NVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVV------SNFIAQALRGEPLTVYG  230 (350)
T ss_pred             ccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhh------HHHHHHHhcCCCeEEEc
Confidence                224578999999999999988666   68888777777777665332211100      001111111        


Q ss_pred             hccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023613          230 NANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       230 ~~~~~~~~~~~~dva~~~~~L~s~~~~  256 (280)
                      ..-..+.+...+|+.+.++.|+..+.+
T Consensus       231 ~G~qtRSF~yvsD~Vegll~Lm~s~~~  257 (350)
T KOG1429|consen  231 DGKQTRSFQYVSDLVEGLLRLMESDYR  257 (350)
T ss_pred             CCcceEEEEeHHHHHHHHHHHhcCCCc
Confidence            111235688899999999999965443

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.29  E-value=1e-10  Score=100.65  Aligned_cols=197  Identities=14%  Similarity=0.110  Sum_probs=117.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC-ccEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT-LDIM   98 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-~d~l   98 (280)
                      ++|||||+|.+|+.++++|.+.|++|.+..|+.+....        ..+..+.+|+.|++++...++.. +...+ +|.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~--------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v   71 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG--------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAV   71 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC--------CCCccccccCCCHHHHHHHHhcc-cCcCCceeEE
Confidence            37999999999999999999999999999998764321        23456678999999998877543 22345 9999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      +++++....           ..+        .    .+.+++..++.+-.+||++||.....+.       ..+...+.+
T Consensus        72 ~~~~~~~~~-----------~~~--------~----~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~  121 (285)
T TIGR03649        72 YLVAPPIPD-----------LAP--------P----MIKFIDFARSKGVRRFVLLSASIIEKGG-------PAMGQVHAH  121 (285)
T ss_pred             EEeCCCCCC-----------hhH--------H----HHHHHHHHHHcCCCEEEEeeccccCCCC-------chHHHHHHH
Confidence            998763211           011        1    1123333334555799999986543221       123222222


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCe
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYI  258 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~  258 (280)
                      .+.      ..|+....+.|+++...+.............      .+..........+++++|+|++++.++....  .
T Consensus       122 l~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~--~  187 (285)
T TIGR03649       122 LDS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKEN------KIYSATGDGKIPFVSADDIARVAYRALTDKV--A  187 (285)
T ss_pred             HHh------ccCCCEEEEeccHHhhhhcccccccccccCC------eEEecCCCCccCcccHHHHHHHHHHHhcCCC--c
Confidence            211      1378999999998765442111100000000      0000000011358999999999999886532  2


Q ss_pred             eecEEEeCCcc
Q 023613          259 SGTNLMVDGGF  269 (280)
Q Consensus       259 ~G~~i~~dgG~  269 (280)
                      .|+.+.+.|+.
T Consensus       188 ~~~~~~l~g~~  198 (285)
T TIGR03649       188 PNTDYVVLGPE  198 (285)
T ss_pred             CCCeEEeeCCc
Confidence            35666666643

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.28  E-value=2.5e-10  Score=106.73  Aligned_cols=228  Identities=14%  Similarity=0.084  Sum_probs=140.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcc---hHHHHHHHh------------CC-------CCCeEE
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDN---LGQQVCQSL------------GG-------EPDTFF   70 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~---~V~~~~r~~~---~~~~~~~~~------------~~-------~~~~~~   70 (280)
                      ++||+++||||+|.||+.+++.|++.+.   +|++..|...   ..+.+.+++            .+       ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5899999999999999999999998653   5777777532   222221111            01       246888


Q ss_pred             EecCCCCH------HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhccc
Q 023613           71 CHCDVTKE------EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP  144 (280)
Q Consensus        71 ~~~D~~~~------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~  144 (280)
                      +..|++++      +..+.+.       ..+|+|||+|+....         .+..+..+++|+.+..++++.+...   
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v~f---------~~~~~~a~~vNV~GT~nLLelA~~~---  257 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANTTF---------DERYDVAIDINTRGPCHLMSFAKKC---  257 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH-------hcCCEEEECcccccc---------ccCHHHHHHHHHHHHHHHHHHHHHc---
Confidence            99999987      2333322       269999999987531         1357888999999999999987653   


Q ss_pred             CCCceEEEEcccccccc---------CC----------------------------------------------------
Q 023613          145 QTKGTIISICSVAGAIG---------GL----------------------------------------------------  163 (280)
Q Consensus       145 ~~~~~iv~isS~~~~~~---------~~----------------------------------------------------  163 (280)
                      ....++|++||....-.         .+                                                    
T Consensus       258 ~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g  337 (605)
T PLN02503        258 KKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLG  337 (605)
T ss_pred             CCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcc
Confidence            12246888887543211         10                                                    


Q ss_pred             --------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHh-h-----
Q 023613          164 --------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA-R-----  229 (280)
Q Consensus       164 --------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~-----  229 (280)
                              ....|.-+|+..+.+++..+     .++.+..+.|..|.+-+........+. ............ .     
T Consensus       338 ~~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~-~~~~~p~~~~~g~G~lr~~  411 (605)
T PLN02503        338 LERAKLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEG-NRMMDPIVLYYGKGQLTGF  411 (605)
T ss_pred             cchhhhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccC-ccccchhhhheeccceeEE
Confidence                    01356667777666665322     268999999999966543332222111 000000001110 0     


Q ss_pred             --hccCCCCCCCHHHHHHHHHHhcCC--CCCCeeecEEEeCCc
Q 023613          230 --NANMQGTELTANDVANAVLFLASD--EARYISGTNLMVDGG  268 (280)
Q Consensus       230 --~~~~~~~~~~~~dva~~~~~L~s~--~~~~~~G~~i~~dgG  268 (280)
                        .....-.++.++-|+++++..+..  ......+.++++..+
T Consensus       412 ~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        412 LADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             EeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence              001123468999999999877321  111236899999877

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.23  E-value=2.4e-10  Score=104.78  Aligned_cols=161  Identities=18%  Similarity=0.227  Sum_probs=117.3

Q ss_pred             CcEEE----EEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           18 GRVAL----ITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vl----ItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      |..+|    |+||++|+|.++++.|...|+.|+.+.+...+..                  ..              ...
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~------------------~~--------------~~~   81 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA------------------AG--------------WGD   81 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc------------------cC--------------cCC
Confidence            44555    8888899999999999999999998766544110                  00              012


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +++.+++-+-..         .+.+++        ...+.+++.+++.|.  ..|+||+++|..+..   ....|+++|+
T Consensus        82 ~~~~~~~d~~~~---------~~~~~l--------~~~~~~~~~~l~~l~--~~griv~i~s~~~~~---~~~~~~~aka  139 (450)
T PRK08261         82 RFGALVFDATGI---------TDPADL--------KALYEFFHPVLRSLA--PCGRVVVLGRPPEAA---ADPAAAAAQR  139 (450)
T ss_pred             cccEEEEECCCC---------CCHHHH--------HHHHHHHHHHHHhcc--CCCEEEEEccccccC---CchHHHHHHH
Confidence            444444332111         112222        233456777788774  358999999987653   3346999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      ++.++++.+++|+ .++++++.|.|+.                                     ..++++++++.+++++
T Consensus       140 al~gl~rsla~E~-~~gi~v~~i~~~~-------------------------------------~~~~~~~~~~~~l~s~  181 (450)
T PRK08261        140 ALEGFTRSLGKEL-RRGATAQLVYVAP-------------------------------------GAEAGLESTLRFFLSP  181 (450)
T ss_pred             HHHHHHHHHHHHh-hcCCEEEEEecCC-------------------------------------CCHHHHHHHHHHhcCC
Confidence            9999999999999 7799999998874                                     1457889999999999


Q ss_pred             CCCCeeecEEEeCCccc
Q 023613          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+.+.++++..
T Consensus       182 ~~a~~~g~~i~~~~~~~  198 (450)
T PRK08261        182 RSAYVSGQVVRVGAADA  198 (450)
T ss_pred             ccCCccCcEEEecCCcc
Confidence            98999999999999875

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.23  E-value=4.2e-11  Score=99.40  Aligned_cols=103  Identities=17%  Similarity=0.220  Sum_probs=79.8

Q ss_pred             CcEEEEEcC-CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGG-ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa-~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +.+=.||.. +||||+++|++|+++|++|+++++...        +....   ...+|+.+.+++.++++.+.+.++++|
T Consensus        14 D~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iD   82 (227)
T TIGR02114        14 DSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPEP---HPNLSIREIETTKDLLITLKELVQEHD   82 (227)
T ss_pred             CCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccccc---CCcceeecHHHHHHHHHHHHHHcCCCC
Confidence            455677755 679999999999999999999876321        11101   135899999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK  136 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  136 (280)
                      ++|||||+...  .++.+.+.++|++++..   +.+.+.+
T Consensus        83 iLVnnAgv~d~--~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        83 ILIHSMAVSDY--TPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             EEEECCEeccc--cchhhCCHHHHhhhcch---hhhhccc
Confidence            99999998654  67888999999988554   4444443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.23  E-value=7e-10  Score=106.56  Aligned_cols=142  Identities=17%  Similarity=0.108  Sum_probs=99.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ..+++|||||+|.||+++++.|.++|+.|..                       ...|++|.+.+.+.++..     ++|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-----------------------~~~~l~d~~~v~~~i~~~-----~pd  430 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-----------------------GKGRLEDRSSLLADIRNV-----KPT  430 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe-----------------------eccccccHHHHHHHHHhh-----CCC
Confidence            3567999999999999999999999987731                       124678888777666543     799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------c----
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------G----  161 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~----  161 (280)
                      +|||+|+....  . -.+...++-++.+++|+.++.++++++...     +.+++++||.....           +    
T Consensus       431 ~Vih~Aa~~~~--~-~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-----g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~  502 (668)
T PLN02260        431 HVFNAAGVTGR--P-NVDWCESHKVETIRANVVGTLTLADVCREN-----GLLMMNFATGCIFEYDAKHPEGSGIGFKEE  502 (668)
T ss_pred             EEEECCcccCC--C-CCChHHhCHHHHHHHHhHHHHHHHHHHHHc-----CCeEEEEcccceecCCcccccccCCCCCcC
Confidence            99999997643  1 122334456889999999999999998753     23466666543210           1    


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEe
Q 023613          162 ---GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS  197 (280)
Q Consensus       162 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~  197 (280)
                         .+....|+.+|.+.+.+++.+..   ...+|+..+.
T Consensus       503 ~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        503 DKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence               11236899999999999877632   2345555444

>PLN00016 RNA-binding protein; Provisional

Probab=99.22  E-value=3.2e-10  Score=101.59  Aligned_cols=202  Identities=16%  Similarity=0.083  Sum_probs=123.4

Q ss_pred             cCCcEEEEE----cCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH-------HHhCCCCCeEEEecCCCCHHHHHHH
Q 023613           16 LVGRVALIT----GGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC-------QSLGGEPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        16 l~~k~vlIt----Ga~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~   84 (280)
                      ...+++|||    ||+|.||+.+++.|+++|+.|+++.|+........       ..+. ...+.++.+|+.+   +.++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEEEecHHH---HHhh
Confidence            456889999    99999999999999999999999999875432211       1111 1236778888865   2222


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023613           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  164 (280)
                      ++     ..++|+|||+++..           .           .+...+++++    .+.+-.++|++||.........
T Consensus       126 ~~-----~~~~d~Vi~~~~~~-----------~-----------~~~~~ll~aa----~~~gvkr~V~~SS~~vyg~~~~  174 (378)
T PLN00016        126 VA-----GAGFDVVYDNNGKD-----------L-----------DEVEPVADWA----KSPGLKQFLFCSSAGVYKKSDE  174 (378)
T ss_pred             hc-----cCCccEEEeCCCCC-----------H-----------HHHHHHHHHH----HHcCCCEEEEEccHhhcCCCCC
Confidence            21     13799999987521           1           1222333433    3344468999999764322111


Q ss_pred             --------CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc----
Q 023613          165 --------PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN----  232 (280)
Q Consensus       165 --------~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  232 (280)
                              ...+. +|...+.+.+       ..++.+..+.|+.+..+........  ..      +.........    
T Consensus       175 ~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~--~~------~~~~~~~~~i~~~g  238 (378)
T PLN00016        175 PPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEE--WF------FDRLVRGRPVPIPG  238 (378)
T ss_pred             CCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHH--HH------HHHHHcCCceeecC
Confidence                    01122 6877776543       2478999999999988753321100  00      1111111100    


Q ss_pred             ---CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 ---MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ---~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                         ....++.++|+|++++.++...  ...|+.+++.++..
T Consensus       239 ~g~~~~~~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~  277 (378)
T PLN00016        239 SGIQLTQLGHVKDLASMFALVVGNP--KAAGQIFNIVSDRA  277 (378)
T ss_pred             CCCeeeceecHHHHHHHHHHHhcCc--cccCCEEEecCCCc
Confidence               0124778999999999998543  34578999888753

>PRK12320 hypothetical protein; Provisional

Probab=99.22  E-value=1.3e-09  Score=103.14  Aligned_cols=186  Identities=13%  Similarity=0.134  Sum_probs=120.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|.||+++++.|.++|++|++++|.....      .  ...+.++.+|+.+.. +.+++       .++|+||
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~--~~~ve~v~~Dl~d~~-l~~al-------~~~D~VI   65 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------L--DPRVDYVCASLRNPV-LQELA-------GEADAVI   65 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------c--cCCceEEEccCCCHH-HHHHh-------cCCCEEE
Confidence            589999999999999999999999999999865321      1  135778899999873 33222       3789999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      |+|+....  .            ...+|+.+..++++++..    .+ .++|++||..+.   +  ..|.    ..+.+.
T Consensus        66 HLAa~~~~--~------------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G~---~--~~~~----~aE~ll  117 (699)
T PRK12320         66 HLAPVDTS--A------------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAGR---P--ELYR----QAETLV  117 (699)
T ss_pred             EcCccCcc--c------------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCCC---C--cccc----HHHHHH
Confidence            99986321  0            124799999998888754    22 479999876421   1  1232    123222


Q ss_pred             HHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCC---CCCHHHHHHHHHHhcCCCCC
Q 023613          180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT---ELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dva~~~~~L~s~~~~  256 (280)
                          .+   .++.+..+.|..+..+.......  .       .+..+....  ..++   ++..+|++++++.++...  
T Consensus       118 ----~~---~~~p~~ILR~~nVYGp~~~~~~~--r-------~I~~~l~~~--~~~~pI~vIyVdDvv~alv~al~~~--  177 (699)
T PRK12320        118 ----ST---GWAPSLVIRIAPPVGRQLDWMVC--R-------TVATLLRSK--VSARPIRVLHLDDLVRFLVLALNTD--  177 (699)
T ss_pred             ----Hh---cCCCEEEEeCceecCCCCcccHh--H-------HHHHHHHHH--HcCCceEEEEHHHHHHHHHHHHhCC--
Confidence                22   34778888999888873221100  0       011111110  0122   359999999999988642  


Q ss_pred             CeeecEEEeCCcccc
Q 023613          257 YISGTNLMVDGGFTS  271 (280)
Q Consensus       257 ~~~G~~i~~dgG~~~  271 (280)
                       .+| ++++.||...
T Consensus       178 -~~G-iyNIG~~~~~  190 (699)
T PRK12320        178 -RNG-VVDLATPDTT  190 (699)
T ss_pred             -CCC-EEEEeCCCee
Confidence             134 9999888654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.13  E-value=3.4e-09  Score=91.81  Aligned_cols=165  Identities=15%  Similarity=0.146  Sum_probs=117.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcc---hHHHHHHHhC--------CCCCeEEEecCCCCH------HH
Q 023613           19 RVALITGGATGIGESTVRLFHKH-GAKVCIADVQDN---LGQQVCQSLG--------GEPDTFFCHCDVTKE------ED   80 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~---~~~~~~~~~~--------~~~~~~~~~~D~~~~------~~   80 (280)
                      +++++|||+|.+|+.+++.|... .++|++.-|-+.   ..+++.+...        ...++.++..|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999988865 568888766433   2233333222        136788999999844      33


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc
Q 023613           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI  160 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~  160 (280)
                      .+++.+       .+|.||||++....         ...+.+....|+.|...+++.+.-    .+...+.+|||++...
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~---------v~pYs~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNH---------VFPYSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcc---------cCcHHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeeecc
Confidence            433333       79999999987542         123678889999999998887653    2223489999887644


Q ss_pred             cC--------------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccc
Q 023613          161 GG--------------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL  207 (280)
Q Consensus       161 ~~--------------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~  207 (280)
                      ..                    ...+.|+-||.+.+-+++...    ..|+++..+.||++-.+-..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~----~rGLpv~I~Rpg~I~gds~t  203 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG----DRGLPVTIFRPGYITGDSRT  203 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh----hcCCCeEEEecCeeeccCcc
Confidence            21                    123689999999888886643    34899999999999777653

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.04  E-value=4.7e-09  Score=87.10  Aligned_cols=194  Identities=22%  Similarity=0.205  Sum_probs=112.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~  100 (280)
                      ++||||+|-||++++.+|.+.|+.|++..|+........   .  ..+.       .-+.    +.+..+  .++|++||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---~--~~v~-------~~~~----~~~~~~--~~~DavIN   62 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---H--PNVT-------LWEG----LADALT--LGIDAVIN   62 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---C--cccc-------ccch----hhhccc--CCCCEEEE
Confidence            589999999999999999999999999999887544321   1  0111       0111    111111  27999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhH----HHH
Q 023613          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSK----HAV  175 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK----~al  175 (280)
                      .||..-.    -+-++.+.=+..++.-+..+-    .+.....+. ..+++..=+|..+.++......|--..    -.+
T Consensus        63 LAG~~I~----~rrWt~~~K~~i~~SRi~~T~----~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl  134 (297)
T COG1090          63 LAGEPIA----ERRWTEKQKEEIRQSRINTTE----KLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL  134 (297)
T ss_pred             CCCCccc----cccCCHHHHHHHHHHHhHHHH----HHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence            9997542    111444444555554444444    444443322 235555556666777655444444332    344


Q ss_pred             HHHHHHHHHHHC---CCCeEEEEEeCCeeeccc---cccCCCchhhhhhhhhhHHHHHhhhccCC------CCCCCHHHH
Q 023613          176 LGLNKNVAAELG---KYGIRVNCVSPYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQ------GTELTANDV  243 (280)
Q Consensus       176 ~~~~~~la~e~~---~~gi~v~~v~pg~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dv  243 (280)
                      ..+++.|-.+-.   ..|+||..+.-|.|-.+-   .....+.          + .+  .....+      =.|+..||+
T Consensus       135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~----------f-k~--glGG~~GsGrQ~~SWIhieD~  201 (297)
T COG1090         135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPL----------F-KL--GLGGKLGSGRQWFSWIHIEDL  201 (297)
T ss_pred             HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcch----------h-hh--ccCCccCCCCceeeeeeHHHH
Confidence            455555444332   248999999999886542   1111110          0 00  000111      136889999


Q ss_pred             HHHHHHhcCC
Q 023613          244 ANAVLFLASD  253 (280)
Q Consensus       244 a~~~~~L~s~  253 (280)
                      +++|+|++..
T Consensus       202 v~~I~fll~~  211 (297)
T COG1090         202 VNAILFLLEN  211 (297)
T ss_pred             HHHHHHHHhC
Confidence            9999999954

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.95  E-value=6.4e-09  Score=86.44  Aligned_cols=212  Identities=17%  Similarity=0.184  Sum_probs=140.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++.+|-++-|-||++.+|+-+++.|++.|..|++-.|.++..-.-.+-+++-+.+.++..|+.|+++|++.++      
T Consensus        56 RsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk------  129 (391)
T KOG2865|consen   56 RSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK------  129 (391)
T ss_pred             cccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH------
Confidence            45678999999999999999999999999999999999776544444445555789999999999999999888      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                       +-++|||..|.-.+    ....+.+      ++|+.++-.+.+.+..    .+--++|++|+..+.  ....+-|--+|
T Consensus       130 -~sNVVINLIGrd~e----Tknf~f~------Dvn~~~aerlAricke----~GVerfIhvS~Lgan--v~s~Sr~LrsK  192 (391)
T KOG2865|consen  130 -HSNVVINLIGRDYE----TKNFSFE------DVNVHIAERLARICKE----AGVERFIHVSCLGAN--VKSPSRMLRSK  192 (391)
T ss_pred             -hCcEEEEeeccccc----cCCcccc------cccchHHHHHHHHHHh----hChhheeehhhcccc--ccChHHHHHhh
Confidence             77899999996432    2223333      3566677666666543    344689999987744  23334566677


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh--hcc-------CCCCCCCHHHH
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--NAN-------MQGTELTANDV  243 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~dv  243 (280)
                      ++-+--++.   ++..    ...+.|.-+....        +...   .++..+..+  ..+       .....+.+-||
T Consensus       193 ~~gE~aVrd---afPe----AtIirPa~iyG~e--------Drfl---n~ya~~~rk~~~~pL~~~GekT~K~PVyV~DV  254 (391)
T KOG2865|consen  193 AAGEEAVRD---AFPE----ATIIRPADIYGTE--------DRFL---NYYASFWRKFGFLPLIGKGEKTVKQPVYVVDV  254 (391)
T ss_pred             hhhHHHHHh---hCCc----ceeechhhhcccc--------hhHH---HHHHHHHHhcCceeeecCCcceeeccEEEehH
Confidence            766654433   3333    2345555443221        1100   112222121  111       12345677899


Q ss_pred             HHHHHHhcCCCCCCeeecEEEeCC
Q 023613          244 ANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       244 a~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      |.+|+..+.+.  .-.|.++..-|
T Consensus       255 aa~IvnAvkDp--~s~Gktye~vG  276 (391)
T KOG2865|consen  255 AAAIVNAVKDP--DSMGKTYEFVG  276 (391)
T ss_pred             HHHHHHhccCc--cccCceeeecC
Confidence            99999999765  45788887654

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.90  E-value=8.2e-09  Score=99.32  Aligned_cols=176  Identities=15%  Similarity=0.177  Sum_probs=138.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcch--HHHH-HHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNL--GQQV-CQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~--~~~~-~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..|.++|+||-+|.|.+++++|.++|++ +++++|+--+  .+.. ...-+ ....+.+-..|++..+....++++..+ 
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k- 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK- 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh-
Confidence            5899999999999999999999999998 7888887422  2221 11112 224566667899999999999987754 


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      .+.+..++|.|.+..+  ..+++.+++.|++..+-.+.+.+++-+.-.+.--+  -.++|..||.+.-.+..++..|+-+
T Consensus      1846 l~~vGGiFnLA~VLRD--~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG~a 1921 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRD--GLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYGLA 1921 (2376)
T ss_pred             cccccchhhHHHHHHh--hhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccchh
Confidence            4889999999999988  89999999999999999999999887766554322  2589999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCee
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAV  201 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v  201 (280)
                      .++++.+++.-..+    |..-.+|.-|.+
T Consensus      1922 NS~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1922 NSAMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred             hHHHHHHHHHhhhc----CCCcceeeeecc
Confidence            99999999874433    333344454444

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.89  E-value=1.8e-07  Score=85.22  Aligned_cols=246  Identities=16%  Similarity=0.101  Sum_probs=151.7

Q ss_pred             ccccccCCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHh-----CCCCCeEEEecCCCCHHHHHH
Q 023613           11 PAVQRLVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSL-----GGEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~-~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~   83 (280)
                      ++.....+|++|||||+ +.||-+++..|++.|++||++..+- +...+..+.+     .......++..+.++..++++
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            34456789999999998 7899999999999999999976543 2222333332     223456778899999999999


Q ss_pred             HHHHHHHHc--------------CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-Cc
Q 023613           84 AVDLTVEKF--------------GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KG  148 (280)
Q Consensus        84 ~~~~~~~~~--------------~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~  148 (280)
                      +++.|-+..              -.+|.+|-.|.+...  +.+.+..... +-.+++-+++...++-.+.+.-..++ ..
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~--G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~  545 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS--GELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDT  545 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCcc--CccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCccc
Confidence            999986421              136777777776544  5555555433 44445555555555544444322221 24


Q ss_pred             eEEEEccccccccC-CCCccchhhHHHHHHHHHHHHHHH--CCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHH
Q 023613          149 TIISICSVAGAIGG-LGPHAYTGSKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN  225 (280)
Q Consensus       149 ~iv~isS~~~~~~~-~~~~~Y~~sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~  225 (280)
                      |.-.|-..+-.+++ .+-+.|+-+|++++.++..+..|-  +.+ +.+.--..|++..-..-.   ..+..       ..
T Consensus       546 R~hVVLPgSPNrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~-vsl~~A~IGWtrGTGLMg---~Ndii-------v~  614 (866)
T COG4982         546 RLHVVLPGSPNRGMFGGDGAYGESKLALDAVVNRWHSESSWAAR-VSLAHALIGWTRGTGLMG---HNDII-------VA  614 (866)
T ss_pred             ceEEEecCCCCCCccCCCcchhhHHHHHHHHHHHhhccchhhHH-HHHhhhheeeeccccccC---Ccchh-------HH
Confidence            54444444444443 356799999999999988877664  322 444444567775443211   11100       00


Q ss_pred             HHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCe---eecEEEeCCcccccc
Q 023613          226 FVARNANMQGTELTANDVANAVLFLASDEARYI---SGTNLMVDGGFTSVN  273 (280)
Q Consensus       226 ~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~---~G~~i~~dgG~~~~~  273 (280)
                      ...+..   -+--+++|+|..++-|++......   +-=...++||...++
T Consensus       615 aiEk~G---V~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~~  662 (866)
T COG4982         615 AIEKAG---VRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEVP  662 (866)
T ss_pred             HHHHhC---ceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccch
Confidence            011110   134588999999999997644322   234566788887653

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.83  E-value=1.4e-08  Score=84.80  Aligned_cols=207  Identities=16%  Similarity=0.150  Sum_probs=118.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~  100 (280)
                      ++|+||+|.+|+.+++.|.+.+++|.+..|+.....  .+.+.. ..+.++.+|+.|++++.+.++       +.|.+|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~--~~~l~~-~g~~vv~~d~~~~~~l~~al~-------g~d~v~~   70 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR--AQQLQA-LGAEVVEADYDDPESLVAALK-------GVDAVFS   70 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH--HHHHHH-TTTEEEES-TT-HHHHHHHHT-------TCSEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh--hhhhhc-ccceEeecccCCHHHHHHHHc-------CCceEEe
Confidence            689999999999999999999999999999874321  111211 134567999999988877666       9999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC--C--CccchhhHHHHH
Q 023613          101 NAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--G--PHAYTGSKHAVL  176 (280)
Q Consensus       101 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~--~--~~~Y~~sK~al~  176 (280)
                      +.+...+       .   .        +.....+++++...    +-.++|+ ||........  .  ...+-..|+.++
T Consensus        71 ~~~~~~~-------~---~--------~~~~~~li~Aa~~a----gVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie  127 (233)
T PF05368_consen   71 VTPPSHP-------S---E--------LEQQKNLIDAAKAA----GVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIE  127 (233)
T ss_dssp             ESSCSCC-------C---H--------HHHHHHHHHHHHHH----T-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred             ecCcchh-------h---h--------hhhhhhHHHhhhcc----ccceEEE-EEecccccccccccccchhhhhhhhhh
Confidence            8875421       1   1        11223344554442    2356764 5544333211  1  122234566665


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCC-CCHHHHHHHHHHhcCCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-LTANDVANAVLFLASDEA  255 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~~~~L~s~~~  255 (280)
                      .+.+..       ++....+.||+..........+.......  .....+. ........+ ++++|+++++..++....
T Consensus       128 ~~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~Dvg~~va~il~~p~  197 (233)
T PF05368_consen  128 EYLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIKKS--KDVVTLP-GPGNQKAVPVTDTRDVGRAVAAILLDPE  197 (233)
T ss_dssp             HHHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCT--SSEEEEE-TTSTSEEEEEEHHHHHHHHHHHHHHSGG
T ss_pred             hhhhhc-------cccceeccccchhhhhhhhhccccccccc--ceEEEEc-cCCCccccccccHHHHHHHHHHHHcChH
Confidence            544333       78899999998765543321110000000  0000000 000000123 388999999999998755


Q ss_pred             CCeeecEEEeCCccc
Q 023613          256 RYISGTNLMVDGGFT  270 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~  270 (280)
                      ..-.|..+.+.|...
T Consensus       198 ~~~~~~~~~~~~~~~  212 (233)
T PF05368_consen  198 KHNNGKTIFLAGETL  212 (233)
T ss_dssp             GTTEEEEEEEGGGEE
T ss_pred             HhcCCEEEEeCCCCC
Confidence            554788888876544

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.79  E-value=2.7e-08  Score=89.09  Aligned_cols=81  Identities=25%  Similarity=0.344  Sum_probs=62.5

Q ss_pred             cccCCcEEEEEcC---------------CCh-HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC
Q 023613           14 QRLVGRVALITGG---------------ATG-IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK   77 (280)
Q Consensus        14 ~~l~~k~vlItGa---------------~~g-iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~   77 (280)
                      .+++||++|||||               ++| +|+++|++|+++|++|++++++.+ ..       ....  +..+|+++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~~~--~~~~dv~~  253 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TPAG--VKRIDVES  253 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CCCC--cEEEccCC
Confidence            3578999999999               444 999999999999999999988753 11       0111  34579998


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 023613           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~d~li~~ag~~~~  107 (280)
                      .+++.+.++   +.++++|++|||||+...
T Consensus       254 ~~~~~~~v~---~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        254 AQEMLDAVL---AALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHH---HhcCCCCEEEEccccccc
Confidence            888765554   557899999999998644

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.76  E-value=7.7e-08  Score=78.12  Aligned_cols=83  Identities=18%  Similarity=0.316  Sum_probs=67.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++++++|+||+|++|+.+++.|+++|++|++++|+.++.+.+.+.+..........+|..+.+++.+.++       +
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~   97 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------G   97 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------c
Confidence            678999999999999999999999999999999999998888877766432233455678888877765554       7


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      .|++|++...
T Consensus        98 ~diVi~at~~  107 (194)
T cd01078          98 ADVVFAAGAA  107 (194)
T ss_pred             CCEEEECCCC
Confidence            7888887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.74  E-value=6.2e-08  Score=83.53  Aligned_cols=84  Identities=20%  Similarity=0.338  Sum_probs=64.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc---chHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD---NLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++... ..+.+..+|+.+.+++...++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467999999999 69999999999999997 99999986   6666666666432 344556688877766654433   


Q ss_pred             HHcCCccEEEECCCCCC
Q 023613           90 EKFGTLDIMVNNAGISG  106 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~  106 (280)
                          ..|+||||..+.-
T Consensus       199 ----~~DilINaTp~Gm  211 (289)
T PRK12548        199 ----SSDILVNATLVGM  211 (289)
T ss_pred             ----cCCEEEEeCCCCC
Confidence                5699999987653

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.63  E-value=9.2e-08  Score=78.05  Aligned_cols=229  Identities=14%  Similarity=0.033  Sum_probs=143.7

Q ss_pred             cccccC-CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-HHHHHh------CCCCCeEEEecCCCCHHHHHH
Q 023613           12 AVQRLV-GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSL------GGEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        12 ~~~~l~-~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~~------~~~~~~~~~~~D~~~~~~~~~   83 (280)
                      .+...+ .|++||||-++-=|.-++..|+..|+.|-.+-|+..... ..++.+      +..+.......|++|..++.+
T Consensus        21 e~~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k  100 (376)
T KOG1372|consen   21 ELGAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIK  100 (376)
T ss_pred             cccCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHH
Confidence            344454 469999999999999999999999999987666432221 122222      112456677899999999999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--
Q 023613           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--  161 (280)
Q Consensus        84 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--  161 (280)
                      ++..+     +++-+.|.|...+.      ..+.+--+-.-++...|.+.++.++...-...+ -++ +-.|++..++  
T Consensus       101 ~I~~i-----kPtEiYnLaAQSHV------kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-Vrf-YQAstSElyGkv  167 (376)
T KOG1372|consen  101 LISTI-----KPTEVYNLAAQSHV------KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRF-YQASTSELYGKV  167 (376)
T ss_pred             HHhcc-----Cchhhhhhhhhcce------EEEeecccceeeccchhhhhHHHHHHhcCcccc-eeE-EecccHhhcccc
Confidence            99987     78888888876543      355555677778888999999999887644332 222 3333333332  


Q ss_pred             ----------CCCCccchhhHHHHHHHHHHHHHHHC---CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHh
Q 023613          162 ----------GLGPHAYTGSKHAVLGLNKNVAAELG---KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA  228 (280)
Q Consensus       162 ----------~~~~~~Y~~sK~al~~~~~~la~e~~---~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  228 (280)
                                ..+.++|+++|.+--.++-.++..|.   ..||-+|--+|..=++-..++..-.-....-  -.+..+..
T Consensus       168 ~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~--gqqe~~~L  245 (376)
T KOG1372|consen  168 QEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISL--GQQEKIEL  245 (376)
T ss_pred             cCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhh--cceeeEEe
Confidence                      33568999999887776666666553   3466666666654333333322100000000  00111111


Q ss_pred             hhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          229 RNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       229 ~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      .+....+.|.-+.|.+++++.++..+.
T Consensus       246 GNL~a~RDWGhA~dYVEAMW~mLQ~d~  272 (376)
T KOG1372|consen  246 GNLSALRDWGHAGDYVEAMWLMLQQDS  272 (376)
T ss_pred             cchhhhcccchhHHHHHHHHHHHhcCC
Confidence            222334678889999999988886543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.62  E-value=2.7e-07  Score=76.76  Aligned_cols=101  Identities=17%  Similarity=0.214  Sum_probs=69.6

Q ss_pred             CcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATG-IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~g-iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +.+=.||+.++| +|+++|++|+++|++|++++|+....     .. ....+.++.++     +..++.+.+.+.++.+|
T Consensus        15 D~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-----~~-~~~~v~~i~v~-----s~~~m~~~l~~~~~~~D   83 (229)
T PRK06732         15 DSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-----PE-PHPNLSIIEIE-----NVDDLLETLEPLVKDHD   83 (229)
T ss_pred             CCceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-----CC-CCCCeEEEEEe-----cHHHHHHHHHHHhcCCC
Confidence            456788877665 99999999999999999998764211     00 01234455442     23333444445556899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV  131 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~  131 (280)
                      ++|||||+...  .+....+.++|.+++++|....
T Consensus        84 ivIh~AAvsd~--~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         84 VLIHSMAVSDY--TPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEEeCCccCCc--eehhhhhhhhhhhhhhhhhhhc
Confidence            99999998754  5566778888999988876654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.62  E-value=1e-06  Score=71.18  Aligned_cols=198  Identities=13%  Similarity=0.094  Sum_probs=117.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA---KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      |+++|||++|=.|++|.+-+.++|.   +.+..+.                    -.+|+++..+.+++++..     ++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s--------------------kd~DLt~~a~t~~lF~~e-----kP   56 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS--------------------KDADLTNLADTRALFESE-----KP   56 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc--------------------ccccccchHHHHHHHhcc-----CC
Confidence            6899999999999999999998864   2222221                    137999999999999865     78


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-----cc---------
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-----IG---------  161 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-----~~---------  161 (280)
                      ..+||.|+-..   +.+...+  .--+.++.|+.-.-+.++.+...    +--++++..|+.-.     +|         
T Consensus        57 thVIhlAAmVG---Glf~N~~--ynldF~r~Nl~indNVlhsa~e~----gv~K~vsclStCIfPdkt~yPIdEtmvh~g  127 (315)
T KOG1431|consen   57 THVIHLAAMVG---GLFHNNT--YNLDFIRKNLQINDNVLHSAHEH----GVKKVVSCLSTCIFPDKTSYPIDETMVHNG  127 (315)
T ss_pred             ceeeehHhhhc---chhhcCC--CchHHHhhcceechhHHHHHHHh----chhhhhhhcceeecCCCCCCCCCHHHhccC
Confidence            89999987653   2222222  11233444444444444554442    22234444443321     11         


Q ss_pred             --CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHH---------hhh
Q 023613          162 --GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV---------ARN  230 (280)
Q Consensus       162 --~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  230 (280)
                        -|....|+.+|..+.-..+.++.++.   -...++.|-.+..|-..=.....--.-..+..+-...         -..
T Consensus       128 pphpsN~gYsyAKr~idv~n~aY~~qhg---~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGs  204 (315)
T KOG1431|consen  128 PPHPSNFGYSYAKRMIDVQNQAYRQQHG---RDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGS  204 (315)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhC---CceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecC
Confidence              12345799999888888888888864   4667778877766642211111000000000011110         012


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCC
Q 023613          231 ANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      ..+.++++..+|+|++++|++.+
T Consensus       205 G~PlRqFiys~DLA~l~i~vlr~  227 (315)
T KOG1431|consen  205 GSPLRQFIYSDDLADLFIWVLRE  227 (315)
T ss_pred             CChHHHHhhHhHHHHHHHHHHHh
Confidence            23457889999999999999964

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.59  E-value=1.2e-07  Score=84.69  Aligned_cols=111  Identities=19%  Similarity=0.233  Sum_probs=75.0

Q ss_pred             ccCCcEEEEEcC---------------CCh-HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH
Q 023613           15 RLVGRVALITGG---------------ATG-IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        15 ~l~~k~vlItGa---------------~~g-iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~   78 (280)
                      +++||++|||||               ||| +|.++|+.|..+|++|++++++....      .  ..  ....+|+++.
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~--~~--~~~~~~v~~~  251 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------T--PP--GVKSIKVSTA  251 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------C--CC--CcEEEEeccH
Confidence            588999999999               666 99999999999999999988765321      1  11  1245789988


Q ss_pred             HHH-HHHHHHHHHHcCCccEEEECCCCCCCCCCCCC--CCCHHHHHHHhhhhhHhHHHHHHHHHH
Q 023613           79 EDV-CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR--EADLSEFEKVFDINVKGVFHGMKHAAR  140 (280)
Q Consensus        79 ~~~-~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~  140 (280)
                      +++ ++++++   .++++|++|+|||+...  .+..  +...+..++.+.+|+...--+++.+..
T Consensus       252 ~~~~~~~~~~---~~~~~D~~i~~Aavsd~--~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       252 EEMLEAALNE---LAKDFDIFISAAAVADF--KPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHHHHHh---hcccCCEEEEccccccc--cccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            888 555543   34689999999999754  2221  111111123456777766666665554

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.58  E-value=7.1e-06  Score=69.83  Aligned_cols=199  Identities=17%  Similarity=0.139  Sum_probs=121.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +.+|||||+|.+|++++++|.+.|+.|.+..|+.+......      ..+.+...|+.++.++...++       +.|.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~-------G~~~~   67 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAK-------GVDGV   67 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhc-------cccEE
Confidence            36899999999999999999999999999999998877654      467788899999998877666       88888


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      ++..+... + ..          ..............+...     ....+++.+|...+..  .....|..+|...+..
T Consensus        68 ~~i~~~~~-~-~~----------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~  128 (275)
T COG0702          68 LLISGLLD-G-SD----------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA  128 (275)
T ss_pred             EEEecccc-c-cc----------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence            88887643 1 11          111222223333333322     1234577776665443  2446888999888877


Q ss_pred             HHHHHHHHCCCCeEEEEEe-CCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCC--CCCCCHHHHHHHHHHhcCCCC
Q 023613          179 NKNVAAELGKYGIRVNCVS-PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~-pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~~~~L~s~~~  255 (280)
                      .+..       |+.-..+. ++++....... .  ....    ......   .....  -..+..+|++..+...+....
T Consensus       129 l~~s-------g~~~t~lr~~~~~~~~~~~~-~--~~~~----~~~~~~---~~~~~~~~~~i~~~d~a~~~~~~l~~~~  191 (275)
T COG0702         129 LRSS-------GIPYTTLRRAAFYLGAGAAF-I--EAAE----AAGLPV---IPRGIGRLSPIAVDDVAEALAAALDAPA  191 (275)
T ss_pred             HHhc-------CCCeEEEecCeeeeccchhH-H--HHHH----hhCCce---ecCCCCceeeeEHHHHHHHHHHHhcCCc
Confidence            6553       44433333 33332211110 0  0000    000000   00011  245788999998888876543


Q ss_pred             CCeeecEEEeCCc
Q 023613          256 RYISGTNLMVDGG  268 (280)
Q Consensus       256 ~~~~G~~i~~dgG  268 (280)
                        ..|+.+.+.|=
T Consensus       192 --~~~~~~~l~g~  202 (275)
T COG0702         192 --TAGRTYELAGP  202 (275)
T ss_pred             --ccCcEEEccCC
Confidence              56677776664

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.50  E-value=1.9e-06  Score=77.71  Aligned_cols=218  Identities=13%  Similarity=0.145  Sum_probs=132.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC---CeEEEEecCc---chHH--------HHHHHhC---CC--CCeEEEecCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHG---AKVCIADVQD---NLGQ--------QVCQSLG---GE--PDTFFCHCDV   75 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g---~~V~~~~r~~---~~~~--------~~~~~~~---~~--~~~~~~~~D~   75 (280)
                      -++||+++||||+|++|+-++..|.+.-   -++++.-|..   +..+        .+.+.+.   +.  .++..+..|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            3789999999999999999999999753   2466665542   1111        1222221   11  5778888898


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           76 TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      ++++---.--+.. .....+|++||+|+...-         .+.++..+.+|.+|+..+++.+.....   -..++++|.
T Consensus        89 ~~~~LGis~~D~~-~l~~eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVST  155 (467)
T KOG1221|consen   89 SEPDLGISESDLR-TLADEVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVST  155 (467)
T ss_pred             cCcccCCChHHHH-HHHhcCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEeeh
Confidence            8763211100100 112489999999987632         356889999999999999998876532   246888886


Q ss_pred             ccccc----------cCC------------------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEE
Q 023613          156 VAGAI----------GGL------------------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC  195 (280)
Q Consensus       156 ~~~~~----------~~~------------------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~  195 (280)
                      .....          +.+                              ....|.-+|+-.+++...-+.     ++.+..
T Consensus       156 Ay~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~-----~lPivI  230 (467)
T KOG1221|consen  156 AYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE-----NLPLVI  230 (467)
T ss_pred             hheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc-----CCCeEE
Confidence            65531          100                              124677778777776655433     477888


Q ss_pred             EeCCeeeccccccCCCchhhhhhhhh-------h-HHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          196 VSPYAVATGLALAHLPEEERTEDAMV-------G-FRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       196 v~pg~v~T~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      +.|..|.+.......++.+....+.-       + .+.++. .......+++++.|+++++..+
T Consensus       231 iRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~-d~~~~adiIPvD~vvN~~ia~~  293 (467)
T KOG1221|consen  231 IRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLV-DPKAVADIIPVDMVVNAMIASA  293 (467)
T ss_pred             EcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEE-ccccccceeeHHHHHHHHHHHH
Confidence            89988877765554433222111100       0 000000 1111256789999999987444

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.31  E-value=3.8e-06  Score=74.40  Aligned_cols=77  Identities=19%  Similarity=0.362  Sum_probs=66.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           19 RVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +.+||.|+ |++|+.+|..|++.| .+|.+++|+.+...++.+....  ++..+.+|+.+.+.+.++++       +.|+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~--~v~~~~vD~~d~~al~~li~-------~~d~   71 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG--KVEALQVDAADVDALVALIK-------DFDL   71 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc--cceeEEecccChHHHHHHHh-------cCCE
Confidence            56899999 999999999999998 8899999999988887666543  78899999999998877777       4599


Q ss_pred             EEECCCCC
Q 023613           98 MVNNAGIS  105 (280)
Q Consensus        98 li~~ag~~  105 (280)
                      +||++...
T Consensus        72 VIn~~p~~   79 (389)
T COG1748          72 VINAAPPF   79 (389)
T ss_pred             EEEeCCch
Confidence            99999754

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.26  E-value=1.1e-05  Score=61.59  Aligned_cols=79  Identities=19%  Similarity=0.275  Sum_probs=60.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++|+++|.|+ ||.|++++.+|++.|++ |.++.|+.++.+++.+.+. ...+.++..  .+..   +.+      
T Consensus         7 ~~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~-~~~~~~~~~--~~~~---~~~------   73 (135)
T PF01488_consen    7 FGDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG-GVNIEAIPL--EDLE---EAL------   73 (135)
T ss_dssp             HSTGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT-GCSEEEEEG--GGHC---HHH------
T ss_pred             cCCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC-ccccceeeH--HHHH---HHH------
Confidence            34789999999998 89999999999999998 9999999999999988883 223444433  2322   112      


Q ss_pred             cCCccEEEECCCCC
Q 023613           92 FGTLDIMVNNAGIS  105 (280)
Q Consensus        92 ~~~~d~li~~ag~~  105 (280)
                       .+.|++|++.+..
T Consensus        74 -~~~DivI~aT~~~   86 (135)
T PF01488_consen   74 -QEADIVINATPSG   86 (135)
T ss_dssp             -HTESEEEE-SSTT
T ss_pred             -hhCCeEEEecCCC
Confidence             3899999998864

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.18  E-value=2.7e-05  Score=69.28  Aligned_cols=173  Identities=13%  Similarity=0.127  Sum_probs=105.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC-
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   93 (280)
                      ..+..+|+|+||+|++|+-+++.|.+.|..|.+.-|+.+..+...+..........+..|...+.++.   ..+.+... 
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~---~~~~~~~~~  152 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDIL---KKLVEAVPK  152 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchh---hhhhhhccc
Confidence            35688999999999999999999999999999999998877776551111223334445555544442   22222221 


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ...+++-++|.-..  .  +     +..--+++...+..++.+++..    .+-.++++++|..+.........+..  .
T Consensus       153 ~~~~v~~~~ggrp~--~--e-----d~~~p~~VD~~g~knlvdA~~~----aGvk~~vlv~si~~~~~~~~~~~~~~--~  217 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPE--E--E-----DIVTPEKVDYEGTKNLVDACKK----AGVKRVVLVGSIGGTKFNQPPNILLL--N  217 (411)
T ss_pred             cceeEEecccCCCC--c--c-----cCCCcceecHHHHHHHHHHHHH----hCCceEEEEEeecCcccCCCchhhhh--h
Confidence            34566666665432  1  1     2333445666677888888743    33458999998887665544333331  1


Q ss_pred             HHHHHH-HHHHHHHCCCCeEEEEEeCCeeeccc
Q 023613          174 AVLGLN-KNVAAELGKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       174 al~~~~-~~la~e~~~~gi~v~~v~pg~v~T~~  205 (280)
                      +...-. +...+.+...|+.-..|.||..+.+.
T Consensus       218 ~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  218 GLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             hhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence            111111 12233344567888888998776644

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.18  E-value=9.5e-06  Score=73.01  Aligned_cols=76  Identities=22%  Similarity=0.367  Sum_probs=59.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |+|.|+ |.+|+.+++.|++.+-  +|++.+|+.++++++.+.+ ...++....+|+.|.+++.++++       +-|+|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~-------~~dvV   71 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLR-------GCDVV   71 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHT-------TSSEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHh-------cCCEE
Confidence            689999 9999999999999864  7999999999988887765 23588999999999998877766       66999


Q ss_pred             EECCCCC
Q 023613           99 VNNAGIS  105 (280)
Q Consensus        99 i~~ag~~  105 (280)
                      ||++|..
T Consensus        72 in~~gp~   78 (386)
T PF03435_consen   72 INCAGPF   78 (386)
T ss_dssp             EE-SSGG
T ss_pred             EECCccc
Confidence            9999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=98.17  E-value=4.2e-06  Score=69.51  Aligned_cols=84  Identities=17%  Similarity=0.134  Sum_probs=51.6

Q ss_pred             cCCcEEEEEcCC----------------ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH
Q 023613           16 LVGRVALITGGA----------------TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus        16 l~~k~vlItGa~----------------~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   79 (280)
                      |+||+||||+|.                |.+|.++|++|.++|+.|+++++.......   .......+..+..    ..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~~~~~~~~V~s----~~   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DINNQLELHPFEG----II   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccCCceeEEEEec----HH
Confidence            579999999886                999999999999999999988764221100   0010112222222    22


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCC
Q 023613           80 DVCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~d~li~~ag~~~~  107 (280)
                      ++...+.++.+. .++|++||+|++...
T Consensus        74 d~~~~l~~~~~~-~~~D~VIH~AAvsD~  100 (229)
T PRK09620         74 DLQDKMKSIITH-EKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHHHHhcc-cCCCEEEECccccce
Confidence            222223322211 378999999998543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.14  E-value=0.00011  Score=57.74  Aligned_cols=184  Identities=15%  Similarity=0.097  Sum_probs=115.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      .+.|.||+|-.|..|++...++|+.|..+.|++.++...       ..+..++.|+.|++++.+.+.       +.|+||
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~-------g~DaVI   67 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLA-------GHDAVI   67 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhc-------CCceEE
Confidence            578999999999999999999999999999999876543       245678899999988755444       999999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC---------Cccc-h
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG---------PHAY-T  169 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~---------~~~Y-~  169 (280)
                      ...|...+  .     ..   +.+.        .-.+++...++.....|++.++...+++-.++         ...| .
T Consensus        68 sA~~~~~~--~-----~~---~~~~--------k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~  129 (211)
T COG2910          68 SAFGAGAS--D-----ND---ELHS--------KSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKP  129 (211)
T ss_pred             EeccCCCC--C-----hh---HHHH--------HHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHH
Confidence            99987632  1     00   1111        11344555555556789999887776654332         1233 3


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecccccc--CCCchhhhhhhhhhHHHHHhhhccCCC-CCCCHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA--HLPEEERTEDAMVGFRNFVARNANMQG-TELTANDVANA  246 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~  246 (280)
                      .+++. .-+.+.|..+   .++.-.-|+|-...-|..+.  .....+.-          ..   .-.| ..++.+|.|-+
T Consensus       130 ~A~~~-ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~l----------l~---n~~G~SrIS~aDYAiA  192 (211)
T COG2910         130 EALAQ-AEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQL----------LV---NAKGESRISYADYAIA  192 (211)
T ss_pred             HHHHH-HHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceE----------EE---cCCCceeeeHHHHHHH
Confidence            34433 3344455444   34667777887665553221  11111100          00   0002 46788999999


Q ss_pred             HHHhcC
Q 023613          247 VLFLAS  252 (280)
Q Consensus       247 ~~~L~s  252 (280)
                      ++.-+.
T Consensus       193 ~lDe~E  198 (211)
T COG2910         193 VLDELE  198 (211)
T ss_pred             HHHHHh
Confidence            887774

>PLN00106 malate dehydrogenase

Probab=98.13  E-value=4.5e-05  Score=66.58  Aligned_cols=161  Identities=16%  Similarity=0.106  Sum_probs=99.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ..++++|+|++|.+|..++..|+..+.  .+++++.++ ......+..+.......  .++++.++...       .+.+
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a~Dl~~~~~~~~i--~~~~~~~d~~~-------~l~~   86 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVAADVSHINTPAQV--RGFLGDDQLGD-------ALKG   86 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeEchhhhCCcCceE--EEEeCCCCHHH-------HcCC
Confidence            457899999999999999999997654  699999877 22212222221122222  23222222222       2248


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-------------cc
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-------------IG  161 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-------------~~  161 (280)
                      .|++|+.||....+        ..++.+.+..|+.....+.+.+.++    ...++++++|-...             .+
T Consensus        87 aDiVVitAG~~~~~--------g~~R~dll~~N~~i~~~i~~~i~~~----~p~aivivvSNPvD~~~~i~t~~~~~~s~  154 (323)
T PLN00106         87 ADLVIIPAGVPRKP--------GMTRDDLFNINAGIVKTLCEAVAKH----CPNALVNIISNPVNSTVPIAAEVLKKAGV  154 (323)
T ss_pred             CCEEEEeCCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEeCCCccccHHHHHHHHHHcCC
Confidence            99999999986431        1346778888988877777766654    33345555554332             12


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCC
Q 023613          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY  199 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg  199 (280)
                      .|....|+.++.-...|-..+++++.-....|++..-|
T Consensus       155 ~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~ViG  192 (323)
T PLN00106        155 YDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVVG  192 (323)
T ss_pred             CCcceEEEEecchHHHHHHHHHHHhCCChhheEEEEEE
Confidence            44567888888777778888888876443334444333

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.10  E-value=2e-05  Score=68.95  Aligned_cols=73  Identities=23%  Similarity=0.338  Sum_probs=55.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-C-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKH-G-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++||||+|.||+.+|++|+++ | .+++++.|+.+.+..+.+++..        .|+.   ++.       +.+
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~--------~~i~---~l~-------~~l  213 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG--------GKIL---SLE-------EAL  213 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc--------ccHH---hHH-------HHH
Confidence            589999999999999999999999864 5 5799999998877776554431        1222   122       233


Q ss_pred             CCccEEEECCCCC
Q 023613           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 ~~~d~li~~ag~~  105 (280)
                      ...|++|+.++..
T Consensus       214 ~~aDiVv~~ts~~  226 (340)
T PRK14982        214 PEADIVVWVASMP  226 (340)
T ss_pred             ccCCEEEECCcCC
Confidence            5799999999874

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.03  E-value=2.2e-05  Score=72.10  Aligned_cols=77  Identities=22%  Similarity=0.384  Sum_probs=58.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++|+|+++ +|.++|+.|+++|+.|++++++. +..++..+.+.. ..+.++..|..+.            ..+
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~------------~~~   67 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIELVLGEYPEE------------FLE   67 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCEEEeCCcchh------------Hhh
Confidence            57899999999888 99999999999999999999975 344443444432 1345667777651            225


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      .+|+||+++|+.
T Consensus        68 ~~d~vv~~~g~~   79 (450)
T PRK14106         68 GVDLVVVSPGVP   79 (450)
T ss_pred             cCCEEEECCCCC
Confidence            799999999974

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.98  E-value=6.3e-05  Score=65.60  Aligned_cols=148  Identities=17%  Similarity=0.079  Sum_probs=89.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++.++++|+|++|.+|..++..|+..+  ..+++++++.. ..+..+..+......  ..+.+++.+..+.+       
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~-~g~a~Dl~~~~~~~~--v~~~td~~~~~~~l-------   74 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA-PGVAADLSHIDTPAK--VTGYADGELWEKAL-------   74 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC-cccccchhhcCcCce--EEEecCCCchHHHh-------
Confidence            4667799999999999999999999654  56999998321 111222222222222  23444433221212       


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc-------------c
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-------------A  159 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-------------~  159 (280)
                      .+.|+||+++|....        +.+++.+.+..|+...-.+.+.+.+    .+..++|+++|-..             .
T Consensus        75 ~gaDvVVitaG~~~~--------~~~tR~dll~~N~~i~~~i~~~i~~----~~~~~iviv~SNPvdv~~~~~~~~~~~~  142 (321)
T PTZ00325         75 RGADLVLICAGVPRK--------PGMTRDDLFNTNAPIVRDLVAAVAS----SAPKAIVGIVSNPVNSTVPIAAETLKKA  142 (321)
T ss_pred             CCCCEEEECCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHH----HCCCeEEEEecCcHHHHHHHHHhhhhhc
Confidence            489999999997532        1134677888888877776666555    44456777766432             1


Q ss_pred             ccCCCCccchhhHHHHHHH--HHHHHHHH
Q 023613          160 IGGLGPHAYTGSKHAVLGL--NKNVAAEL  186 (280)
Q Consensus       160 ~~~~~~~~Y~~sK~al~~~--~~~la~e~  186 (280)
                      .+.|....|+.+  .|++.  -..+++.+
T Consensus       143 sg~p~~~viG~g--~LDs~R~r~~la~~l  169 (321)
T PTZ00325        143 GVYDPRKLFGVT--TLDVVRARKFVAEAL  169 (321)
T ss_pred             cCCChhheeech--hHHHHHHHHHHHHHh
Confidence            223455577776  25543  44555554

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.88  E-value=0.00013  Score=62.58  Aligned_cols=77  Identities=18%  Similarity=0.346  Sum_probs=56.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+.+.....+.+   +. +   .       .+...
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~---~~-~---~-------~~~~~  184 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL---DL-E---L-------QEELA  184 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee---cc-c---c-------hhccc
Confidence            578999999997 899999999999999 6899999999888887776652211111   11 0   0       11124


Q ss_pred             CccEEEECCCCCC
Q 023613           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~~d~li~~ag~~~  106 (280)
                      ..|+|||+.....
T Consensus       185 ~~DivInaTp~g~  197 (278)
T PRK00258        185 DFDLIINATSAGM  197 (278)
T ss_pred             cCCEEEECCcCCC
Confidence            7899999987653

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.84  E-value=5.2e-05  Score=65.39  Aligned_cols=79  Identities=18%  Similarity=0.224  Sum_probs=66.7

Q ss_pred             EEEEcCCChHHHHHHHHHHH----cCCeEEEEecCcchHHHHHHHhCCC-----CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           21 ALITGGATGIGESTVRLFHK----HGAKVCIADVQDNLGQQVCQSLGGE-----PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~----~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++|-||+|..|.-+++.+++    .|.++-+++|+++++++..+.+...     ....++.||.+|++++.+++.     
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-----   82 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-----   82 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-----
Confidence            68999999999999999999    7888999999999999988877432     233478899999999998888     


Q ss_pred             cCCccEEEECCCCCC
Q 023613           92 FGTLDIMVNNAGISG  106 (280)
Q Consensus        92 ~~~~d~li~~ag~~~  106 (280)
                        +-.+++||+|...
T Consensus        83 --~~~vivN~vGPyR   95 (423)
T KOG2733|consen   83 --QARVIVNCVGPYR   95 (423)
T ss_pred             --hhEEEEeccccce
Confidence              5568999999653

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.80  E-value=0.00047  Score=74.58  Aligned_cols=180  Identities=12%  Similarity=0.099  Sum_probs=116.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+.++.++|++.+++++.+++..|.++|+.|+++...+.. ......+.  ..+..+...-.+..++..+++.+....+.
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1828 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV-SHSASPLA--SAIASVTLGTIDDTSIEAVIKDIEEKTAQ 1828 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc-cccccccc--cccccccccccchHHHHHHHHhhhccccc
Confidence            3558889999889999999999999999998877433211 10000111  11222334445567777788887777788


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc------
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY------  168 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y------  168 (280)
                      ++.+||..+............   .....-...+...+.+.|.+.+.+.....+.++.++...|..+..+....      
T Consensus      1829 ~~g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~ 1905 (2582)
T TIGR02813      1829 IDGFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQV 1905 (2582)
T ss_pred             cceEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccc
Confidence            999999877542100001111   11112224455567777877776655556789999888776665332221      


Q ss_pred             --hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCe
Q 023613          169 --TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA  200 (280)
Q Consensus       169 --~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~  200 (280)
                        ....+++.+|+|++++||....+|...+.|..
T Consensus      1906 ~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1906 KAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence              23588999999999999998778888888753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.78  E-value=0.0003  Score=60.87  Aligned_cols=80  Identities=20%  Similarity=0.286  Sum_probs=55.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +|++++|+|+++++|.++++.+...|++|+++.++++..+.+. .+.  .+..   +|..+.+..+.+.+...  ..++|
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g--~~~~---~~~~~~~~~~~~~~~~~--~~~~d  215 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAG--ADAV---FNYRAEDLADRILAATA--GQGVD  215 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC--CCEE---EeCCCcCHHHHHHHHcC--CCceE
Confidence            5899999999999999999999999999999999887665543 332  1211   34444433333322221  13799


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      .+++++|.
T Consensus       216 ~vi~~~~~  223 (325)
T cd08253         216 VIIEVLAN  223 (325)
T ss_pred             EEEECCch
Confidence            99999863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.77  E-value=0.00015  Score=59.26  Aligned_cols=160  Identities=18%  Similarity=0.223  Sum_probs=102.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHH-cCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHK-HGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~-~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +-+..++||||+-|-+|..+|..|.. .|.. |++.+-..+...     .-..+  -++..|+.|..++++++-.     
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~~G--PyIy~DILD~K~L~eIVVn-----  108 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTDVG--PYIYLDILDQKSLEEIVVN-----  108 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hcccC--CchhhhhhccccHHHhhcc-----
Confidence            44577899999999999999999985 4765 666544333211     11112  2556788888877655431     


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-------cCC--
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-------GGL--  163 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-------~~~--  163 (280)
                      .++|-+||-.+..+.       ......--..++|+.|.-++++.+..+-.      -+++-|+-+-.       |+|  
T Consensus       109 ~RIdWL~HfSALLSA-------vGE~NVpLA~~VNI~GvHNil~vAa~~kL------~iFVPSTIGAFGPtSPRNPTPdl  175 (366)
T KOG2774|consen  109 KRIDWLVHFSALLSA-------VGETNVPLALQVNIRGVHNILQVAAKHKL------KVFVPSTIGAFGPTSPRNPTPDL  175 (366)
T ss_pred             cccceeeeHHHHHHH-------hcccCCceeeeecchhhhHHHHHHHHcCe------eEeecccccccCCCCCCCCCCCe
Confidence            389999997665432       22223445678999999999988776522      24444433322       222  


Q ss_pred             ----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEE-eCCeee
Q 023613          164 ----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV-SPYAVA  202 (280)
Q Consensus       164 ----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v-~pg~v~  202 (280)
                          +...|+.||.-.+-+-+.+...   +|+.+.++ .||.+.
T Consensus       176 tIQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is  216 (366)
T KOG2774|consen  176 TIQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIIS  216 (366)
T ss_pred             eeecCceeechhHHHHHHHHHHHHhh---cCccceecccCcccc
Confidence                3468999998888777777555   45655555 455553

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.73  E-value=0.00019  Score=61.40  Aligned_cols=76  Identities=14%  Similarity=0.198  Sum_probs=56.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ..+|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.+...........|     +.         .....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~~---------~~~~~  179 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD-----EL---------PLHRV  179 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh-----hh---------cccCc
Confidence            45899999999 59999999999999999999999988888777766532222222111     10         12468


Q ss_pred             cEEEECCCCCC
Q 023613           96 DIMVNNAGISG  106 (280)
Q Consensus        96 d~li~~ag~~~  106 (280)
                      |++||+.+...
T Consensus       180 DivInatp~gm  190 (270)
T TIGR00507       180 DLIINATSAGM  190 (270)
T ss_pred             cEEEECCCCCC
Confidence            99999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.71  E-value=0.00021  Score=62.68  Aligned_cols=117  Identities=17%  Similarity=0.187  Sum_probs=65.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC-------CeEEEEecCcch--HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHG-------AKVCIADVQDNL--GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++||||+|.+|.+++..|+..+       ..|++.++++..  ++...-.+...  ......|+....+       +.+
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~--~~~~~~~~~~~~~-------~~~   74 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC--AFPLLKSVVATTD-------PEE   74 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc--cccccCCceecCC-------HHH
Confidence            48999999999999999999844       579999996532  22110001000  0011113222222       222


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      .+.+.|+||+.||....     ...+.   .+.++.|+.-.-.+.+.+..+-  ..++.++.++.
T Consensus        75 ~l~~aDiVI~tAG~~~~-----~~~~R---~~l~~~N~~i~~~i~~~i~~~~--~~~~iiivvsN  129 (325)
T cd01336          75 AFKDVDVAILVGAMPRK-----EGMER---KDLLKANVKIFKEQGEALDKYA--KKNVKVLVVGN  129 (325)
T ss_pred             HhCCCCEEEEeCCcCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEecC
Confidence            33489999999998643     12232   5566677665544444444321  12566777663

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.70  E-value=0.00022  Score=55.39  Aligned_cols=76  Identities=18%  Similarity=0.322  Sum_probs=55.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++++++|+|+ +++|+++++.|.+.| ..|.+.+|+.+..++..+.+....    +..+..+.++.          ..
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~----------~~   80 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG----IAIAYLDLEEL----------LA   80 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc----cceeecchhhc----------cc
Confidence            367899999998 899999999999996 779999999888777666654211    12233333222          24


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      +.|++|++.+..
T Consensus        81 ~~Dvvi~~~~~~   92 (155)
T cd01065          81 EADLIINTTPVG   92 (155)
T ss_pred             cCCEEEeCcCCC
Confidence            899999999764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.67  E-value=0.00033  Score=56.20  Aligned_cols=78  Identities=23%  Similarity=0.342  Sum_probs=47.8

Q ss_pred             cCCcEEEEEcCC----------------ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH
Q 023613           16 LVGRVALITGGA----------------TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus        16 l~~k~vlItGa~----------------~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   79 (280)
                      |+||+||||+|.                |..|.++|+.+...|+.|+++..... +..       ...+..+.  +.+.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~-------p~~~~~i~--v~sa~   70 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP-------PPGVKVIR--VESAE   70 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE---SSHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc-------cccceEEE--ecchh
Confidence            579999999653                58999999999999999998877642 110       12344443  44454


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCC
Q 023613           80 DVCSAVDLTVEKFGTLDIMVNNAGISG  106 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~d~li~~ag~~~  106 (280)
                      ++   .+.+.+.+..-|++|++|.+..
T Consensus        71 em---~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   71 EM---LEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             HH---HHHHHHHGGGGSEEEE-SB--S
T ss_pred             hh---hhhhccccCcceeEEEecchhh
Confidence            54   4555555556699999999864

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.66  E-value=0.00039  Score=54.37  Aligned_cols=161  Identities=11%  Similarity=0.059  Sum_probs=100.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++.+.++|.||++-.|..+.+.+++.+  .+|+++.|++....+.      ...+.....|+..-++       ..+.
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------~k~v~q~~vDf~Kl~~-------~a~~   80 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------DKVVAQVEVDFSKLSQ-------LATN   80 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------cceeeeEEechHHHHH-------HHhh
Confidence            34678899999999999999999999987  4588888875322111      1233444566654333       3334


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+.+++-|....- ...        +..+++.---.+.+.+++-    +.+-..++.+||..+....  ...|--.
T Consensus        81 ~qg~dV~FcaLgTTRgk-aGa--------dgfykvDhDyvl~~A~~AK----e~Gck~fvLvSS~GAd~sS--rFlY~k~  145 (238)
T KOG4039|consen   81 EQGPDVLFCALGTTRGK-AGA--------DGFYKVDHDYVLQLAQAAK----EKGCKTFVLVSSAGADPSS--RFLYMKM  145 (238)
T ss_pred             hcCCceEEEeecccccc-ccc--------CceEeechHHHHHHHHHHH----hCCCeEEEEEeccCCCccc--ceeeeec
Confidence            46999999999886531 111        1112222112233334332    2445689999987765443  3578788


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecccccc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALA  208 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~  208 (280)
                      |.-++.=+..|--      -++..+.||++..+....
T Consensus       146 KGEvE~~v~eL~F------~~~~i~RPG~ll~~R~es  176 (238)
T KOG4039|consen  146 KGEVERDVIELDF------KHIIILRPGPLLGERTES  176 (238)
T ss_pred             cchhhhhhhhccc------cEEEEecCcceecccccc
Confidence            8777665544322      278889999998776543

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.63  E-value=0.00033  Score=65.49  Aligned_cols=49  Identities=22%  Similarity=0.436  Sum_probs=43.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~   63 (280)
                      .++++|+++|+|+ +|+|++++..|++.|++|+++.|+.++.+.+.+.+.
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            3578999999999 599999999999999999999999888887776653

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.58  E-value=0.0024  Score=55.80  Aligned_cols=79  Identities=25%  Similarity=0.433  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+++++|+|+++++|.++++.+...|++|+++.++++..+.+ ....  ..   ...|..+.+....+.+....  +++|
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~--~~---~~~~~~~~~~~~~~~~~~~~--~~~d  237 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELG--AD---YVIDYRKEDFVREVRELTGK--RGVD  237 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--CC---eEEecCChHHHHHHHHHhCC--CCCc
Confidence            588999999999999999999999999999999888766544 2222  11   12355555555444433321  3799


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++++++|
T Consensus       238 ~~i~~~g  244 (342)
T cd08266         238 VVVEHVG  244 (342)
T ss_pred             EEEECCc
Confidence            9999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.49  E-value=0.00037  Score=63.99  Aligned_cols=79  Identities=27%  Similarity=0.322  Sum_probs=52.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|||+++ +|.++|+.|++.|++|++.+++........+.+... .+.+....  +...+   .+      ..
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~-g~~~~~~~--~~~~~---~~------~~   68 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE-GIKVICGS--HPLEL---LD------ED   68 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc-CCEEEeCC--CCHHH---hc------Cc
Confidence            46799999999986 999999999999999999998754333333333221 12222221  11111   11      14


Q ss_pred             ccEEEECCCCCC
Q 023613           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 ~d~li~~ag~~~  106 (280)
                      +|.||+++|+..
T Consensus        69 ~d~vV~s~gi~~   80 (447)
T PRK02472         69 FDLMVKNPGIPY   80 (447)
T ss_pred             CCEEEECCCCCC
Confidence            899999999864

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.47  E-value=0.0035  Score=56.02  Aligned_cols=77  Identities=22%  Similarity=0.308  Sum_probs=55.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +.++.++|.|+ |.+|+..++.+...|++|++++|+.++++.+.+....     .+..+..+.+.+.+.+       ...
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~-----~v~~~~~~~~~l~~~l-------~~a  231 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG-----RIHTRYSNAYEIEDAV-------KRA  231 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc-----eeEeccCCHHHHHHHH-------ccC
Confidence            56778999988 7899999999999999999999998877665544331     1223445555443332       378


Q ss_pred             cEEEECCCCC
Q 023613           96 DIMVNNAGIS  105 (280)
Q Consensus        96 d~li~~ag~~  105 (280)
                      |++|+++++.
T Consensus       232 DvVI~a~~~~  241 (370)
T TIGR00518       232 DLLIGAVLIP  241 (370)
T ss_pred             CEEEEccccC
Confidence            9999998764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK06849 hypothetical protein; Provisional

Probab=97.47  E-value=0.0013  Score=59.30  Aligned_cols=83  Identities=18%  Similarity=0.255  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +.|+|||||++..+|..+++.|.+.|++|++++.+........+...   .+..+...-.+.+...+.+.++.++ .++|
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d---~~~~~p~p~~d~~~~~~~L~~i~~~-~~id   78 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD---GFYTIPSPRWDPDAYIQALLSIVQR-ENID   78 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh---heEEeCCCCCCHHHHHHHHHHHHHH-cCCC
Confidence            36899999999999999999999999999999988655443222222   2222322233444444444444444 3689


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|-...
T Consensus        79 ~vIP~~e   85 (389)
T PRK06849         79 LLIPTCE   85 (389)
T ss_pred             EEEECCh
Confidence            9988765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.40  E-value=0.00081  Score=59.07  Aligned_cols=77  Identities=23%  Similarity=0.415  Sum_probs=55.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC--Cc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--TL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~   95 (280)
                      |+++||+||+||+|...++.....|+.++++..++++.+ .++.+...  ..   .|..+.+    +.+++++..+  ++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd--~v---i~y~~~~----~~~~v~~~t~g~gv  212 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGAD--HV---INYREED----FVEQVRELTGGKGV  212 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCC--EE---EcCCccc----HHHHHHHHcCCCCc
Confidence            899999999999999999988889977777766666666 55655532  11   1233333    4555555543  59


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |+++...|.
T Consensus       213 Dvv~D~vG~  221 (326)
T COG0604         213 DVVLDTVGG  221 (326)
T ss_pred             eEEEECCCH
Confidence            999999984

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.38  E-value=0.001  Score=57.27  Aligned_cols=79  Identities=10%  Similarity=0.091  Sum_probs=55.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++++.+.....+..    +...+++       .+...
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~----~~~~~~~-------~~~~~  189 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR----LEGDSGG-------LAIEK  189 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee----ccchhhh-------hhccc
Confidence            467899999976 8999999999999997 599999999988888777643222111    1111111       11124


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      ..|+|||+....
T Consensus       190 ~~DiVInaTp~g  201 (282)
T TIGR01809       190 AAEVLVSTVPAD  201 (282)
T ss_pred             CCCEEEECCCCC
Confidence            789999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.38  E-value=0.00036  Score=56.85  Aligned_cols=49  Identities=18%  Similarity=0.350  Sum_probs=42.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~   62 (280)
                      ..+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++.+..+...+.+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            346899999999996 8999999999999999999999988777665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.31  E-value=0.0019  Score=55.47  Aligned_cols=81  Identities=16%  Similarity=0.246  Sum_probs=55.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++|.|+ ||-+++++..|++.|+ +|.++.|+.++.+++.+.+... ........+.   .+.....       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~---~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCH---hHHHHHH-------
Confidence            456899999998 8999999999999997 5889999999888887776422 1111111221   1111111       


Q ss_pred             CCccEEEECCCCCC
Q 023613           93 GTLDIMVNNAGISG  106 (280)
Q Consensus        93 ~~~d~li~~ag~~~  106 (280)
                      ...|+|||+..+.-
T Consensus       193 ~~~divINaTp~Gm  206 (283)
T PRK14027        193 AAADGVVNATPMGM  206 (283)
T ss_pred             hhcCEEEEcCCCCC
Confidence            36899999987643

>PRK05086 malate dehydrogenase; Provisional

Probab=97.31  E-value=0.005  Score=53.74  Aligned_cols=115  Identities=17%  Similarity=0.199  Sum_probs=64.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHH-c--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           19 RVALITGGATGIGESTVRLFHK-H--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +.++|.||+|++|.+++..+.. .  +..+++.++++.......+..+......+..++-.+   +       .+.....
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d---~-------~~~l~~~   70 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGED---P-------TPALEGA   70 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCC---H-------HHHcCCC
Confidence            4689999999999999998865 2  346788888754211111111111111111112222   1       1122479


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      |++|.++|....+     ..+   -.+.+..|....-.+.+.+.+    ....+++.+.|
T Consensus        71 DiVIitaG~~~~~-----~~~---R~dll~~N~~i~~~ii~~i~~----~~~~~ivivvs  118 (312)
T PRK05086         71 DVVLISAGVARKP-----GMD---RSDLFNVNAGIVKNLVEKVAK----TCPKACIGIIT  118 (312)
T ss_pred             CEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEcc
Confidence            9999999986531     122   355677777666665555544    33334555544

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.23  E-value=0.0033  Score=55.13  Aligned_cols=114  Identities=11%  Similarity=0.090  Sum_probs=66.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHH--HH--HHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGA-------KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVC--SA--VDLT   88 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~--~~~~   88 (280)
                      ++.|+|++|.+|..++..|+..+.       .+++.+++++...           ......|+.+.....  ..  ....
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~-----------a~g~~~Dl~d~~~~~~~~~~~~~~~   69 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV-----------LEGVVMELMDCAFPLLDGVVPTHDP   69 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc-----------cceeEeehhcccchhcCceeccCCh
Confidence            378999999999999999998553       4889998654310           112223333332100  00  0011


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .+.+...|++|+.||....        ..+++.+.+..|+.-.-.+.+.+.++-  ..++.++.++
T Consensus        70 ~~~~~~aDiVVitAG~~~~--------~~~tr~~ll~~N~~i~k~i~~~i~~~~--~~~~iiivvs  125 (324)
T TIGR01758        70 AVAFTDVDVAILVGAFPRK--------EGMERRDLLSKNVKIFKEQGRALDKLA--KKDCKVLVVG  125 (324)
T ss_pred             HHHhCCCCEEEEcCCCCCC--------CCCcHHHHHHHHHHHHHHHHHHHHhhC--CCCeEEEEeC
Confidence            2334589999999997532        123357777777766655555544421  1346777666

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.19  E-value=0.0022  Score=58.09  Aligned_cols=75  Identities=13%  Similarity=0.189  Sum_probs=56.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++.+|+++|.|+ ||+|+.++..|++.|. +++++.|+.++.+.+.+.++.   ...+  +   .++.       .+...
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~---~~~~--~---~~~l-------~~~l~  241 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN---ASAH--Y---LSEL-------PQLIK  241 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC---CeEe--c---HHHH-------HHHhc
Confidence            578999999999 9999999999999996 599999998888887776541   1111  1   1222       22335


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      .-|+||++.+..
T Consensus       242 ~aDiVI~aT~a~  253 (414)
T PRK13940        242 KADIIIAAVNVL  253 (414)
T ss_pred             cCCEEEECcCCC
Confidence            789999998764

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.17  E-value=0.0059  Score=53.34  Aligned_cols=73  Identities=18%  Similarity=0.343  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|++++|+|++ |+|...++.....|++|+.++|++++++...+ +.  .+. ++  |.++++..+.+-+       ..|
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-lG--Ad~-~i--~~~~~~~~~~~~~-------~~d  231 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LG--ADH-VI--NSSDSDALEAVKE-------IAD  231 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-hC--CcE-EE--EcCCchhhHHhHh-------hCc
Confidence            49999999999 99998887777799999999999998776544 32  122 22  3334444333222       399


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|..++
T Consensus       232 ~ii~tv~  238 (339)
T COG1064         232 AIIDTVG  238 (339)
T ss_pred             EEEECCC
Confidence            9999998

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.17  E-value=0.0015  Score=56.10  Aligned_cols=78  Identities=14%  Similarity=0.132  Sum_probs=62.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      ...++|.||++-.|.-+|++|+++|.+..+.+|+.+++..+..++..+.  ....  +.++..+++++.       +.++
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~--~~~p--~~~p~~~~~~~~-------~~~V   74 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEA--AVFP--LGVPAALEAMAS-------RTQV   74 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccc--cccC--CCCHHHHHHHHh-------cceE
Confidence            3457999999999999999999999999999999999999988887542  2333  333655555554       7889


Q ss_pred             EEECCCCCC
Q 023613           98 MVNNAGISG  106 (280)
Q Consensus        98 li~~ag~~~  106 (280)
                      |+||+|...
T Consensus        75 VlncvGPyt   83 (382)
T COG3268          75 VLNCVGPYT   83 (382)
T ss_pred             EEecccccc
Confidence            999999754

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.15  E-value=0.013  Score=54.39  Aligned_cols=111  Identities=22%  Similarity=0.266  Sum_probs=71.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-------------HHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-------------EDVC   82 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~~~~   82 (280)
                      ..+.+|+|+|+ |.+|...+..+...|+.|+++++++++++...+ ++  .+  ++..|..+.             +..+
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lG--A~--~v~i~~~e~~~~~~gya~~~s~~~~~  236 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MG--AE--FLELDFEEEGGSGDGYAKVMSEEFIK  236 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--Ce--EEEeccccccccccchhhhcchhHHH
Confidence            46899999987 489999999999999999999999988776543 44  22  222232221             1122


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           83 SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      +..+.+.+..++.|++|.++|+...+                     .+..+++..+..|+  ++|.|+.++.
T Consensus       237 ~~~~~~~~~~~gaDVVIetag~pg~~---------------------aP~lit~~~v~~mk--pGgvIVdvg~  286 (509)
T PRK09424        237 AEMALFAEQAKEVDIIITTALIPGKP---------------------APKLITAEMVASMK--PGSVIVDLAA  286 (509)
T ss_pred             HHHHHHHhccCCCCEEEECCCCCccc---------------------CcchHHHHHHHhcC--CCCEEEEEcc
Confidence            22222233335799999999975421                     12223455666663  4678888875

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.15  E-value=0.0063  Score=51.70  Aligned_cols=38  Identities=18%  Similarity=0.382  Sum_probs=31.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~   52 (280)
                      ..|+++.|+|.|++ |+|.++|..|++.| -++.+++.+.
T Consensus        26 ~kL~~s~VlVvG~G-GVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         26 QLFADAHICVVGIG-GVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             HHhcCCCEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            35788999999765 99999999999999 5688887763

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.14  E-value=0.0018  Score=54.74  Aligned_cols=74  Identities=11%  Similarity=0.203  Sum_probs=54.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +++||+|||+- |+.+++.|.+.|+.|+++.+++...+.+.+    . ....+..+..+.+++.+++.+     .++|+|
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~-g~~~v~~g~l~~~~l~~~l~~-----~~i~~V   69 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----H-QALTVHTGALDPQELREFLKR-----HSIDIL   69 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----c-CCceEEECCCCHHHHHHHHHh-----cCCCEE
Confidence            36899999998 999999999999999999888865443322    1 122344566777776555542     289999


Q ss_pred             EECCC
Q 023613           99 VNNAG  103 (280)
Q Consensus        99 i~~ag  103 (280)
                      |+.+.
T Consensus        70 IDAtH   74 (256)
T TIGR00715        70 VDATH   74 (256)
T ss_pred             EEcCC
Confidence            99885

This enzyme was found to be a monomer by gel filtration.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.14  E-value=0.01  Score=48.60  Aligned_cols=208  Identities=16%  Similarity=0.069  Sum_probs=121.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.+.+-.+.++.|+.+..|.++|+.-...+..|.+..|+..+  +..+.  -...+.+...|.....-.       +...
T Consensus        47 ~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~s--w~~~vswh~gnsfssn~~-------k~~l  115 (283)
T KOG4288|consen   47 KQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSS--WPTYVSWHRGNSFSSNPN-------KLKL  115 (283)
T ss_pred             hhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhC--CCcccchhhccccccCcc-------hhhh
Confidence            345555678999999999999999999999999999998762  11111  113455555554432211       1111


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      .++.-++-++|....            ...+-++|=...+...+++..    .+-.++++||....-.+.--...|-.+|
T Consensus       116 ~g~t~v~e~~ggfgn------------~~~m~~ing~ani~a~kaa~~----~gv~~fvyISa~d~~~~~~i~rGY~~gK  179 (283)
T KOG4288|consen  116 SGPTFVYEMMGGFGN------------IILMDRINGTANINAVKAAAK----AGVPRFVYISAHDFGLPPLIPRGYIEGK  179 (283)
T ss_pred             cCCcccHHHhcCccc------------hHHHHHhccHhhHHHHHHHHH----cCCceEEEEEhhhcCCCCccchhhhccc
Confidence            255566666665432            344555565566655565543    5568999999766533333334788888


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchh---hhhhhhhhHHHHH---hhhcc----CCCCCCCHHH
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE---RTEDAMVGFRNFV---ARNAN----MQGTELTAND  242 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~----~~~~~~~~~d  242 (280)
                      .+.+.=      -+..++.|-..+.||++....  +.-....   ..-.+.+....+.   ....+    ++...+..++
T Consensus       180 R~AE~E------ll~~~~~rgiilRPGFiyg~R--~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~  251 (283)
T KOG4288|consen  180 REAEAE------LLKKFRFRGIILRPGFIYGTR--NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVES  251 (283)
T ss_pred             hHHHHH------HHHhcCCCceeeccceeeccc--ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHH
Confidence            876542      223345677889999997772  2211110   0000111111111   11122    2345688899


Q ss_pred             HHHHHHHhcCCCC
Q 023613          243 VANAVLFLASDEA  255 (280)
Q Consensus       243 va~~~~~L~s~~~  255 (280)
                      ||.+++..+++..
T Consensus       252 VA~aal~ai~dp~  264 (283)
T KOG4288|consen  252 VALAALKAIEDPD  264 (283)
T ss_pred             HHHHHHHhccCCC
Confidence            9999999987643

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.12  E-value=0.0031  Score=54.32  Aligned_cols=77  Identities=16%  Similarity=0.211  Sum_probs=55.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+.+.+.+... ....+...+     ++.       +..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~-----~~~-------~~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS-----DLA-------AAL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc-----chH-------hhh
Confidence            467899999998 6799999999999998 5999999999988888776432 222222111     111       112


Q ss_pred             CCccEEEECCCC
Q 023613           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 ~~~d~li~~ag~  104 (280)
                      ...|+|||+...
T Consensus       191 ~~aDiVInaTp~  202 (284)
T PRK12549        191 AAADGLVHATPT  202 (284)
T ss_pred             CCCCEEEECCcC
Confidence            468999999644

>cd00704 MDH Malate dehydrogenase

Probab=97.11  E-value=0.0065  Score=53.27  Aligned_cols=110  Identities=14%  Similarity=0.107  Sum_probs=64.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHH----HHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGA-------KVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVC----SAVD   86 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~   86 (280)
                      .+.|+||+|.+|..++..|+..|.       .+++.++++  +.++.             ...|+.+.....    .+-.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g-------------~~~Dl~d~~~~~~~~~~i~~   68 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG-------------VVMELQDCAFPLLKGVVITT   68 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce-------------eeeehhhhcccccCCcEEec
Confidence            479999999999999999998652       489999876  43221             222333221000    0001


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC--CCceEEEEc
Q 023613           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISIC  154 (280)
Q Consensus        87 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~is  154 (280)
                      ...+.+...|++|+.||....+     ..+   =.+.+..|+.-.-.    +.+.+.+.  ..+.++.++
T Consensus        69 ~~~~~~~~aDiVVitAG~~~~~-----g~t---R~dll~~N~~i~~~----i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          69 DPEEAFKDVDVAILVGAFPRKP-----GME---RADLLRKNAKIFKE----QGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             ChHHHhCCCCEEEEeCCCCCCc-----CCc---HHHHHHHhHHHHHH----HHHHHHHhCCCCeEEEEeC
Confidence            1123335899999999985431     223   34466666655544    44444444  356666665

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.11  E-value=0.0032  Score=50.24  Aligned_cols=43  Identities=23%  Similarity=0.251  Sum_probs=36.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~   56 (280)
                      ..++.||++.|.|. |.||+++|+.+...|++|+..+|......
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            44689999999976 89999999999999999999999887544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.11  E-value=0.0046  Score=54.53  Aligned_cols=82  Identities=20%  Similarity=0.306  Sum_probs=54.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc---------------------chHHH---HHHHhCCCCC
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD---------------------NLGQQ---VCQSLGGEPD   67 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~---------------------~~~~~---~~~~~~~~~~   67 (280)
                      ...|++++|+|.|+ ||+|..+++.|++.|. ++.+++++.                     .+.+.   ..+++....+
T Consensus        19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~   97 (338)
T PRK12475         19 QRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE   97 (338)
T ss_pred             HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE
Confidence            34578999999997 6899999999999997 688888863                     12222   2233344455


Q ss_pred             eEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023613           68 TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        68 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag  103 (280)
                      +..+..|++ .+.+++++       .+.|++|.+..
T Consensus        98 i~~~~~~~~-~~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         98 IVPVVTDVT-VEELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEEEeccCC-HHHHHHHh-------cCCCEEEEcCC
Confidence            666666765 33443332       36788887763

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.11  E-value=0.0032  Score=54.25  Aligned_cols=83  Identities=16%  Similarity=0.253  Sum_probs=52.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc---chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD---NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++++|+++|.|+ ||-+++++..|++.|+ +|.++.|+.   ++.+++.+.+...........++   ++...    +.+
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~---~~~~~----l~~  192 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL---ADQQA----FAE  192 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech---hhhhh----hhh
Confidence            467999999997 5559999999999997 599999985   46666666654321111111122   11111    111


Q ss_pred             HcCCccEEEECCCCC
Q 023613           91 KFGTLDIMVNNAGIS  105 (280)
Q Consensus        91 ~~~~~d~li~~ag~~  105 (280)
                      ...+.|+|||+..+.
T Consensus       193 ~~~~aDivINaTp~G  207 (288)
T PRK12749        193 ALASADILTNGTKVG  207 (288)
T ss_pred             hcccCCEEEECCCCC
Confidence            224789999987654

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.11  E-value=0.0091  Score=51.99  Aligned_cols=110  Identities=15%  Similarity=0.167  Sum_probs=70.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCC-----CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGE-----PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.+.|.|+ |++|++++..|+..|  ..|++++++++..+.....+...     ..+.+. .  .+.++           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            35788896 899999999999998  57999999988877766655321     122222 1  22221           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ...-|++|+++|....   +  ..+.   .+.++.|..-...+.+.+.++   ...+.+++++
T Consensus        66 l~~aDIVIitag~~~~---~--g~~R---~dll~~N~~i~~~~~~~i~~~---~~~~~vivvs  117 (306)
T cd05291          66 CKDADIVVITAGAPQK---P--GETR---LDLLEKNAKIMKSIVPKIKAS---GFDGIFLVAS  117 (306)
T ss_pred             hCCCCEEEEccCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEec
Confidence            1489999999997542   1  2233   355666666555555554442   3357777776

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.10  E-value=0.0028  Score=55.86  Aligned_cols=80  Identities=20%  Similarity=0.246  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+|+++++|..+++.+...|++|+.+.+++++.+.+.+.+..  + .++  |..+.++..+.+.....  +++|
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa--~-~vi--~~~~~~~~~~~i~~~~~--~gvd  223 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF--D-DAF--NYKEEPDLDAALKRYFP--NGID  223 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC--c-eeE--EcCCcccHHHHHHHhCC--CCcE
Confidence            589999999999999999988888899999989888776665443442  1 122  22222222222222221  4799


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       224 ~v~d~~g  230 (338)
T cd08295         224 IYFDNVG  230 (338)
T ss_pred             EEEECCC
Confidence            9999886

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.08  E-value=0.0027  Score=58.75  Aligned_cols=72  Identities=15%  Similarity=0.243  Sum_probs=53.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+.+.+.....    .  .+..   +..        ....
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~----~--~~~~---~~~--------~l~~  390 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK----A--FPLE---SLP--------ELHR  390 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc----e--echh---Hhc--------ccCC
Confidence            467899999996 69999999999999999999999988777766554311    1  1111   111        1247


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      .|+|||+...
T Consensus       391 ~DiVInatP~  400 (477)
T PRK09310        391 IDIIINCLPP  400 (477)
T ss_pred             CCEEEEcCCC
Confidence            8999999864

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.08  E-value=0.013  Score=54.15  Aligned_cols=84  Identities=23%  Similarity=0.289  Sum_probs=58.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCC-------------CHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT-------------KEEDVC   82 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~~~~~   82 (280)
                      ..+.+++|.|+ |.+|...+..+...|+.|++++++.+.++.... +.    ..++..|..             +.+..+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lG----a~~v~v~~~e~g~~~~gYa~~~s~~~~~  235 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MG----AEFLELDFKEEGGSGDGYAKVMSEEFIA  235 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC----CeEEeccccccccccccceeecCHHHHH
Confidence            45789999996 899999999999999999999999887665433 33    123334432             134444


Q ss_pred             HHHHHHHHHcCCccEEEECCCCC
Q 023613           83 SAVDLTVEKFGTLDIMVNNAGIS  105 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag~~  105 (280)
                      +..+.+.++..+.|++|+++-+.
T Consensus       236 ~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       236 AEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHhCCCCEEEECcccC
Confidence            44444555567899999999553

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.04  E-value=0.0035  Score=54.05  Aligned_cols=42  Identities=19%  Similarity=0.245  Sum_probs=37.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ   57 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~   57 (280)
                      ++.||+++|.|. |++|+++++.|...|++|.+.+|+.+....
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            678999999999 569999999999999999999998876544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.03  E-value=0.012  Score=51.40  Aligned_cols=113  Identities=15%  Similarity=0.165  Sum_probs=73.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      -+++++.|+|+ |++|..++..++..|.  .+++.+++++.++....++...    .++.+. .  .+.++         
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~---------   70 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD---------   70 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH---------
Confidence            45789999998 9999999999999886  6999999888776655555422    122222 1  22221         


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                        +..-|++|..||....+     ..+.   .+.++.|..-...+.+.+..+   ..++.+++++
T Consensus        71 --~~~adivIitag~~~k~-----g~~R---~dll~~N~~i~~~i~~~i~~~---~~~~~vivvs  122 (315)
T PRK00066         71 --CKDADLVVITAGAPQKP-----GETR---LDLVEKNLKIFKSIVGEVMAS---GFDGIFLVAS  122 (315)
T ss_pred             --hCCCCEEEEecCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEcc
Confidence              24899999999985431     2333   455666666555555544443   2357777766

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.02  E-value=0.0045  Score=53.37  Aligned_cols=79  Identities=24%  Similarity=0.401  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++++++|+|+++++|..+++.+...|++|+++.++++..+.+ +.+.  ...   ..|..+.+...++.+.. . .+++|
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g--~~~---~~~~~~~~~~~~~~~~~-~-~~~~d  210 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALG--ADV---AINYRTEDFAEEVKEAT-G-GRGVD  210 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC--CCE---EEeCCchhHHHHHHHHh-C-CCCeE
Confidence            588999999999999999999999999999999987766554 3333  111   13333333333322211 1 14799


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .+++++|
T Consensus       211 ~vi~~~g  217 (323)
T cd05276         211 VILDMVG  217 (323)
T ss_pred             EEEECCc
Confidence            9999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.01  E-value=0.0038  Score=55.39  Aligned_cols=80  Identities=20%  Similarity=0.257  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.++||.|+++++|..+++.+...|++|+.+++++++.+.+.+.+..  +. ++  |..+.++..+.+.+...  +++|
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa--~~-vi--~~~~~~~~~~~i~~~~~--~gvD  230 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF--DE-AF--NYKEEPDLDAALKRYFP--EGID  230 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC--CE-EE--ECCCcccHHHHHHHHCC--CCcE
Confidence            589999999999999999988888899999988888776655434442  21 22  22222222222222211  3799


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       231 ~v~d~vG  237 (348)
T PLN03154        231 IYFDNVG  237 (348)
T ss_pred             EEEECCC
Confidence            9999887

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.00  E-value=0.015  Score=48.80  Aligned_cols=79  Identities=23%  Similarity=0.316  Sum_probs=52.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .++++++|+|+++ +|.++++.+...|.+|+++.++++..+.+ +...  .. .+  .|..+.+....+.   ....+++
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~-~~--~~~~~~~~~~~~~---~~~~~~~  202 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KELG--AD-HV--IDYKEEDLEEELR---LTGGGGA  202 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhC--Cc-ee--ccCCcCCHHHHHH---HhcCCCC
Confidence            3588999999999 99999998888999999999987665544 3332  11 11  2333322222222   1222579


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |+++++++.
T Consensus       203 d~vi~~~~~  211 (271)
T cd05188         203 DVVIDAVGG  211 (271)
T ss_pred             CEEEECCCC
Confidence            999999863

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.00  E-value=0.0011  Score=44.14  Aligned_cols=35  Identities=26%  Similarity=0.412  Sum_probs=24.3

Q ss_pred             CC-cEEEEEcCCChHHHH--HHHHHHHcCCeEEEEecCc
Q 023613           17 VG-RVALITGGATGIGES--TVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        17 ~~-k~vlItGa~~giG~~--la~~l~~~g~~V~~~~r~~   52 (280)
                      .| |+|||+|+|+|.|.+  |+..| ..|++.+.++...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            45 899999999999999  77666 7788888776543

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.00  E-value=0.0041  Score=54.42  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=53.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.++||+|+++++|..+++.+...|++|+.+.+++++.+.+ +.+..  +.. +  |..+.+...+.+.....  +++|
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa--~~v-i--~~~~~~~~~~~~~~~~~--~gvd  209 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGF--DVA-F--NYKTVKSLEETLKKASP--DGYD  209 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC--CEE-E--eccccccHHHHHHHhCC--CCeE
Confidence            589999999999999999888778899999998887766555 44442  222 2  22222233333333221  3699


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       210 vv~d~~G  216 (325)
T TIGR02825       210 CYFDNVG  216 (325)
T ss_pred             EEEECCC
Confidence            9999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.99  E-value=0.0048  Score=54.35  Aligned_cols=78  Identities=18%  Similarity=0.199  Sum_probs=52.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +++||.|+++++|..+++.....|+ +|+.+.+++++.+.+.+.+..  +. ++  |..+ +++.+.+.++..  +++|+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa--~~-vi--~~~~-~~~~~~i~~~~~--~gvd~  227 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF--DA-AI--NYKT-DNVAERLRELCP--EGVDV  227 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC--cE-EE--ECCC-CCHHHHHHHHCC--CCceE
Confidence            8999999999999999887777898 799998888776665554542  22 22  2222 122222222221  47999


Q ss_pred             EEECCCC
Q 023613           98 MVNNAGI  104 (280)
Q Consensus        98 li~~ag~  104 (280)
                      ++++.|.
T Consensus       228 vid~~g~  234 (345)
T cd08293         228 YFDNVGG  234 (345)
T ss_pred             EEECCCc
Confidence            9998873

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.96  E-value=0.0057  Score=56.06  Aligned_cols=79  Identities=20%  Similarity=0.200  Sum_probs=54.7

Q ss_pred             ccCCcEEEEEcCC----------------ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH
Q 023613           15 RLVGRVALITGGA----------------TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        15 ~l~~k~vlItGa~----------------~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~   78 (280)
                      +|+||.+|||+|.                |-.|.+||+.+...|++|.++.-...        +.....+.++.+  .  
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~~p~~v~~i~V--~--  320 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LADPQGVKVIHV--E--  320 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CCCCCCceEEEe--c--
Confidence            5899999999763                47899999999999999998764322        111123444433  2  


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCC
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~  107 (280)
                       +.+++.+.+.+.+. .|++|++|.+...
T Consensus       321 -ta~eM~~av~~~~~-~Di~I~aAAVaDy  347 (475)
T PRK13982        321 -SARQMLAAVEAALP-ADIAIFAAAVADW  347 (475)
T ss_pred             -CHHHHHHHHHhhCC-CCEEEEeccccce
Confidence             34445555555544 6999999998643

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.95  E-value=0.017  Score=44.19  Aligned_cols=110  Identities=19%  Similarity=0.269  Sum_probs=71.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCC----C-CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGG----E-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+.|+|++|.+|.+++..|...+  ..+++.+++++.++....++..    . ....+..   .+.++           +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            57899999999999999999886  4599999998766665544432    1 1222222   22222           2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ..-|++|..+|....+     ..+   =.+.++.|..-.-.+.+.+.++   ..++.++.++
T Consensus        68 ~~aDivvitag~~~~~-----g~s---R~~ll~~N~~i~~~~~~~i~~~---~p~~~vivvt  118 (141)
T PF00056_consen   68 KDADIVVITAGVPRKP-----GMS---RLDLLEANAKIVKEIAKKIAKY---APDAIVIVVT  118 (141)
T ss_dssp             TTESEEEETTSTSSST-----TSS---HHHHHHHHHHHHHHHHHHHHHH---STTSEEEE-S
T ss_pred             ccccEEEEeccccccc-----ccc---HHHHHHHhHhHHHHHHHHHHHh---CCccEEEEeC
Confidence            4899999999985431     123   3455677777666666666554   3456666664

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.89  E-value=0.0048  Score=53.82  Aligned_cols=75  Identities=24%  Similarity=0.403  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+.+++|+|+++++|+++++.+...|++|+.+.++++..+.+ +.+.  .. .++  |.   ++.   .+.+. ...++|
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~--~~-~~~--~~---~~~---~~~~~-~~~~~d  228 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELG--AD-YVI--DG---SKF---SEDVK-KLGGAD  228 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcC--Cc-EEE--ec---HHH---HHHHH-hccCCC
Confidence            478999999999999999999999999999988887665544 2222  11 111  21   112   22222 224799


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++++++|.
T Consensus       229 ~v~~~~g~  236 (332)
T cd08259         229 VVIELVGS  236 (332)
T ss_pred             EEEECCCh
Confidence            99999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.88  E-value=0.021  Score=52.95  Aligned_cols=89  Identities=17%  Similarity=0.113  Sum_probs=56.6

Q ss_pred             CCCCCCCCCCccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHH
Q 023613            1 MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus         1 m~~~~~~~~~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~   79 (280)
                      |+++|.=..-.  .++++|.++|.|+ |++|.++|+.|.++|++|.++++++. ......+.+... .+.+...+-..  
T Consensus         1 ~~~~~~~~~~~--~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~-gv~~~~~~~~~--   74 (480)
T PRK01438          1 MSRPPGLTSWH--SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL-GATVRLGPGPT--   74 (480)
T ss_pred             CCcccchhhcc--cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc-CCEEEECCCcc--
Confidence            66665544322  3578999999997 67999999999999999999986543 222233333322 23333222111  


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCC
Q 023613           80 DVCSAVDLTVEKFGTLDIMVNNAGISG  106 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~d~li~~ag~~~  106 (280)
                                 .....|.+|...|+..
T Consensus        75 -----------~~~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         75 -----------LPEDTDLVVTSPGWRP   90 (480)
T ss_pred             -----------ccCCCCEEEECCCcCC
Confidence                       0136899999999853

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.87  E-value=0.014  Score=48.53  Aligned_cols=39  Identities=18%  Similarity=0.373  Sum_probs=32.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD   52 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~   52 (280)
                      +..|++++++|.|++ |+|.++++.|++.|. ++++++.+.
T Consensus         6 ~~~L~~~~VlVvG~G-GvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755           6 LEKLRNAHVAVVGLG-GVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             HHHHhCCCEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCE
Confidence            345788899999875 999999999999996 488887654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.87  E-value=0.0067  Score=55.31  Aligned_cols=48  Identities=21%  Similarity=0.461  Sum_probs=41.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~   63 (280)
                      ++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.+..+.+.+.+.
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g  227 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG  227 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC
Confidence            478999999987 9999999999999997 69999999888777766654

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.82  E-value=0.0079  Score=54.71  Aligned_cols=74  Identities=26%  Similarity=0.432  Sum_probs=53.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++.+++++|.|+ |.+|+.+++.|...| .+|++++|+.+....+.+.+..    ..+.     .+++.+.+       .
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~----~~i~-----~~~l~~~l-------~  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG----EAVK-----FEDLEEYL-------A  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC----eEee-----HHHHHHHH-------h
Confidence            478999999997 999999999999999 6799999998877766665542    1111     12322222       3


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      ..|++|.+.+..
T Consensus       240 ~aDvVi~aT~s~  251 (417)
T TIGR01035       240 EADIVISSTGAP  251 (417)
T ss_pred             hCCEEEECCCCC
Confidence            689999987643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.82  E-value=0.012  Score=52.00  Aligned_cols=39  Identities=28%  Similarity=0.459  Sum_probs=34.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD   52 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~   52 (280)
                      ...|+.++|+|.|+ ||+|..++..|++.|. ++.+++.+.
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            34588999999999 7999999999999998 689998863

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.81  E-value=0.0054  Score=52.51  Aligned_cols=80  Identities=15%  Similarity=0.271  Sum_probs=57.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +.+++.++|.|| ||-+++++..|++.|+ +|+++.|+.++.+++.+....... .....+..+.+...           
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~~~~~~~~~~~~~~-----------  189 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-AVEAAALADLEGLE-----------  189 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-cccccccccccccc-----------
Confidence            456899999987 5889999999999995 699999999999988887764321 11122232222110           


Q ss_pred             CccEEEECCCCCCC
Q 023613           94 TLDIMVNNAGISGA  107 (280)
Q Consensus        94 ~~d~li~~ag~~~~  107 (280)
                      ..|++||+....-.
T Consensus       190 ~~dliINaTp~Gm~  203 (283)
T COG0169         190 EADLLINATPVGMA  203 (283)
T ss_pred             ccCEEEECCCCCCC
Confidence            57999999887644

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.79  E-value=0.013  Score=51.82  Aligned_cols=76  Identities=21%  Similarity=0.310  Sum_probs=51.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|++++|+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  +. +  .|..+. ++.+    +.+..+++
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa--~~-v--i~~~~~-~~~~----~~~~~g~~  236 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGA--DK-L--VNPQND-DLDH----YKAEKGYF  236 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCC--cE-E--ecCCcc-cHHH----HhccCCCC
Confidence            6899999986 8999999988778898 588899988777654 33442  21 2  233332 2222    22223569


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|.++|.
T Consensus       237 D~vid~~G~  245 (343)
T PRK09880        237 DVSFEVSGH  245 (343)
T ss_pred             CEEEECCCC
Confidence            999999873

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.78  E-value=0.01  Score=52.57  Aligned_cols=80  Identities=24%  Similarity=0.378  Sum_probs=54.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH-cCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK-FGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   94 (280)
                      -+|+.+||.||++|+|.+.++.....|+..+++.++++..+- .+.++.  +.   ..|..+++-    .+.+++. .++
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l-~k~lGA--d~---vvdy~~~~~----~e~~kk~~~~~  225 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL-VKKLGA--DE---VVDYKDENV----VELIKKYTGKG  225 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH-HHHcCC--cE---eecCCCHHH----HHHHHhhcCCC
Confidence            358899999999999999999888889555666666555443 344442  21   236666433    3444433 468


Q ss_pred             ccEEEECCCCC
Q 023613           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 ~d~li~~ag~~  105 (280)
                      +|+|+-+.|..
T Consensus       226 ~DvVlD~vg~~  236 (347)
T KOG1198|consen  226 VDVVLDCVGGS  236 (347)
T ss_pred             ccEEEECCCCC
Confidence            99999999864

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.75  E-value=0.0042  Score=52.85  Aligned_cols=106  Identities=13%  Similarity=0.148  Sum_probs=74.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   95 (280)
                      .|.|++|++|++..|.-+.+.---.|++|+.+.-.+++..-+.+++....     ..|-..+    .+.+.+++.. .+|
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~-----~idyk~~----d~~~~L~~a~P~GI  220 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA-----GIDYKAE----DFAQALKEACPKGI  220 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCce-----eeecCcc----cHHHHHHHHCCCCe
Confidence            59999999999999987665444569999999999998877777666321     1233333    3355555555 479


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG  161 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~  161 (280)
                      |+++-|.|--                            ++.++++.|  +..+||+..+-++....
T Consensus       221 DvyfeNVGg~----------------------------v~DAv~~~l--n~~aRi~~CG~IS~YN~  256 (340)
T COG2130         221 DVYFENVGGE----------------------------VLDAVLPLL--NLFARIPVCGAISQYNA  256 (340)
T ss_pred             EEEEEcCCch----------------------------HHHHHHHhh--ccccceeeeeehhhcCC
Confidence            9999999842                            234667776  34588888776665443

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.73  E-value=0.0062  Score=52.26  Aligned_cols=39  Identities=21%  Similarity=0.368  Sum_probs=35.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      .+++||.++|.|+++-.|+.++..|.+.|++|.++.|..
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t  193 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT  193 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            368999999999999999999999999999998887743

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.69  E-value=0.011  Score=51.56  Aligned_cols=78  Identities=18%  Similarity=0.208  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.++||.||++++|..+++.....|++|+.+.+++++.+.+.+ +..  + .++  |..+++..++ +.+...  +++|
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga--~-~vi--~~~~~~~~~~-v~~~~~--~gvd  213 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGF--D-AVF--NYKTVSLEEA-LKEAAP--DGID  213 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC--C-EEE--eCCCccHHHH-HHHHCC--CCcE
Confidence            58999999999999999988888889999999888876655533 432  2 122  2222222222 222211  4699


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       214 ~vld~~g  220 (329)
T cd08294         214 CYFDNVG  220 (329)
T ss_pred             EEEECCC
Confidence            9998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.63  E-value=0.0062  Score=48.09  Aligned_cols=40  Identities=18%  Similarity=0.362  Sum_probs=35.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .++.||+++|.|++.-+|..+++.|.++|++|.++.|+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~   79 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK   79 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence            3689999999999777899999999999999999998753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.63  E-value=0.02  Score=46.65  Aligned_cols=38  Identities=26%  Similarity=0.405  Sum_probs=33.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~   51 (280)
                      +..|+.++++|.|+ ||+|..++..|++.|. ++++++++
T Consensus        16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        16 VQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            44588999999998 6899999999999998 59999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14968 putative methyltransferase; Provisional

Probab=96.62  E-value=0.028  Score=44.88  Aligned_cols=119  Identities=15%  Similarity=0.106  Sum_probs=68.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CC-CeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EP-DTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|-.|++.|.   ++..+++.+.+|+.++++++..+...+.+..   .. .+.++.+|+.+.         ..+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--
Confidence            68889999988766   5555566688999999998766655444421   11 177778887542         111  


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHh---HHHHHHHHHHhcccCCCceEEEEc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG---VFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~---~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      +.+|.++.|......  .+.... .+.+...+.....+   .-.+++.+.+.|+  .+|.++++.
T Consensus        89 ~~~d~vi~n~p~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk--~gG~~~~~~  148 (188)
T PRK14968         89 DKFDVILFNPPYLPT--EEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLK--PGGRILLLQ  148 (188)
T ss_pred             cCceEEEECCCcCCC--Cchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcC--CCeEEEEEE
Confidence            279999999876542  211111 11122222222111   2245666677763  356766654

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.60  E-value=0.014  Score=50.91  Aligned_cols=72  Identities=21%  Similarity=0.427  Sum_probs=53.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +.+++++|.|+ |.+|+.+++.|.+.| ..|++++|+.++...+.+.+..    ..+     +.+++.+.+       ..
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~----~~~-----~~~~~~~~l-------~~  238 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG----NAV-----PLDELLELL-------NE  238 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC----eEE-----eHHHHHHHH-------hc
Confidence            67999999987 999999999999876 5688999998888777776652    111     222332222       36


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      .|++|.+.+.
T Consensus       239 aDvVi~at~~  248 (311)
T cd05213         239 ADVVISATGA  248 (311)
T ss_pred             CCEEEECCCC
Confidence            7999999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02928 oxidoreductase family protein

Probab=96.57  E-value=0.014  Score=51.72  Aligned_cols=39  Identities=21%  Similarity=0.287  Sum_probs=35.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .++.||++.|.|- |.||+++|+.|...|++|+..+|+..
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            3689999999998 89999999999999999999998743

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.55  E-value=0.015  Score=50.39  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=36.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ   57 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~   57 (280)
                      .+.+++++|.|. |++|+.++..|...|++|.+++|+.+..+.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~  190 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR  190 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            467999999997 679999999999999999999999765443

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.55  E-value=0.028  Score=48.33  Aligned_cols=76  Identities=22%  Similarity=0.322  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCC-CHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT-KEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~   95 (280)
                      .||++-|+|+++ ||.--++.--..|++|++++++..+.++.++.+...  ..   .|.+ |++.+.++.+.+   .+.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd--~f---v~~~~d~d~~~~~~~~~---dg~~  251 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD--VF---VDSTEDPDIMKAIMKTT---DGGI  251 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc--ee---EEecCCHHHHHHHHHhh---cCcc
Confidence            699999999998 886555444456999999999998888888887743  22   2555 666665554422   1345


Q ss_pred             cEEEEC
Q 023613           96 DIMVNN  101 (280)
Q Consensus        96 d~li~~  101 (280)
                      |.++|.
T Consensus       252 ~~v~~~  257 (360)
T KOG0023|consen  252 DTVSNL  257 (360)
T ss_pred             eeeeec
Confidence            555444

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.53  E-value=0.031  Score=47.06  Aligned_cols=37  Identities=19%  Similarity=0.405  Sum_probs=32.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~   51 (280)
                      ..|+.++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3578999999999 8999999999999996 47777765

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.52  E-value=0.017  Score=57.89  Aligned_cols=78  Identities=13%  Similarity=0.167  Sum_probs=61.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc-CCe-------------EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKH-GAK-------------VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   81 (280)
                      .+.|.++|.|+ |.+|+..++.|++. ++.             |.+++++.+..+++.+...   ++..+.+|++|.+++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~---~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE---NAEAVQLDVSDSESL  642 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC---CCceEEeecCCHHHH
Confidence            45789999997 89999999999986 333             7788888887777666442   456788999999887


Q ss_pred             HHHHHHHHHHcCCccEEEECCCC
Q 023613           82 CSAVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        82 ~~~~~~~~~~~~~~d~li~~ag~  104 (280)
                      .++++       ++|+||++...
T Consensus       643 ~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        643 LKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHhhc-------CCCEEEECCCc
Confidence            66555       69999999875

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.52  E-value=0.015  Score=49.52  Aligned_cols=111  Identities=15%  Similarity=0.180  Sum_probs=68.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcC----CeEEEEecCcchHHHHHHHhCCCC----CeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           21 ALITGGATGIGESTVRLFHKHG----AKVCIADVQDNLGQQVCQSLGGEP----DTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g----~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.|+||+|.+|..++..|+..|    ..|++++++++.++.....+....    ...+..  .+|.          .+.+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~--~~d~----------~~~~   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI--TDDP----------YEAF   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE--CCch----------HHHh
Confidence            4689998899999999999998    689999999887776665554221    111111  1121          1122


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ..-|++|..+|....+     ..+.   ...+..|+.-...+.+.+..+   ..++.+++++
T Consensus        69 ~~aDiVv~t~~~~~~~-----g~~r---~~~~~~n~~i~~~i~~~i~~~---~p~a~~i~~t  119 (263)
T cd00650          69 KDADVVIITAGVGRKP-----GMGR---LDLLKRNVPIVKEIGDNIEKY---SPDAWIIVVS  119 (263)
T ss_pred             CCCCEEEECCCCCCCc-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEec
Confidence            4899999999976431     1221   234444554444444444432   2456777765

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK04148 hypothetical protein; Provisional

Probab=96.50  E-value=0.0065  Score=45.83  Aligned_cols=56  Identities=9%  Similarity=0.041  Sum_probs=44.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   79 (280)
                      +++.+++.|.+  .|.++|..|++.|+.|++++.+++..+...+.     .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-----~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-----GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-----CCeEEECcCCCCC
Confidence            56789999998  78888999999999999999999876655332     3457778887763

>PLN00203 glutamyl-tRNA reductase

Probab=96.50  E-value=0.019  Score=53.56  Aligned_cols=76  Identities=9%  Similarity=0.247  Sum_probs=54.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.+..+.+.+.+.. ..+.+.  ++   ++....+       ..
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~--~~---~dl~~al-------~~  329 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYK--PL---DEMLACA-------AE  329 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEee--cH---hhHHHHH-------hc
Confidence            78999999999 9999999999999997 599999999888887766531 112221  11   2222222       37


Q ss_pred             ccEEEECCCCC
Q 023613           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 ~d~li~~ag~~  105 (280)
                      .|+||.+.+..
T Consensus       330 aDVVIsAT~s~  340 (519)
T PLN00203        330 ADVVFTSTSSE  340 (519)
T ss_pred             CCEEEEccCCC
Confidence            89999887643

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.48  E-value=0.014  Score=50.91  Aligned_cols=114  Identities=16%  Similarity=0.125  Sum_probs=68.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCe--EEEEecCc--chHHHHHHHhCC----CC-CeEEEecCCCCHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAK--VCIADVQD--NLGQQVCQSLGG----EP-DTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~--V~~~~r~~--~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +++.|+|++|.+|..++..|+..|..  |++++|++  +.++.....+..    .. ...+...  .+.+.         
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d~~~---------   69 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SDLSD---------   69 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEEC--CCHHH---------
Confidence            36899999999999999999999865  99999954  433332222211    11 1111111  12111         


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  156 (280)
                        ...-|++|.++|....     .+.+.   .+.++.|+.-...+.+.+.+..   ..+.++.+++.
T Consensus        70 --l~~aDiViitag~p~~-----~~~~r---~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~np  123 (309)
T cd05294          70 --VAGSDIVIITAGVPRK-----EGMSR---LDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTNP  123 (309)
T ss_pred             --hCCCCEEEEecCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCCc
Confidence              2489999999997532     12232   3455667666666666555542   35778887764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.46  E-value=0.018  Score=49.82  Aligned_cols=79  Identities=28%  Similarity=0.410  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++++++|+|+++++|.++++.+...|++|+++.++++..+.+ ....  .+..   .+....+....+.... . .+++|
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~~---~~~~~~~~~~~~~~~~-~-~~~~d  210 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALG--ADIA---INYREEDFVEVVKAET-G-GKGVD  210 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--CcEE---EecCchhHHHHHHHHc-C-CCCeE
Confidence            588999999999999999999999999999998887765543 3332  1111   1222233222222211 1 13699


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|+++|
T Consensus       211 ~~i~~~~  217 (325)
T TIGR02824       211 VILDIVG  217 (325)
T ss_pred             EEEECCc
Confidence            9999886

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.45  E-value=0.022  Score=41.76  Aligned_cols=71  Identities=18%  Similarity=0.165  Sum_probs=51.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~  100 (280)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.+.     .+.++.+|.++++.++++      ...+.+.+|.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~-----~~~~i~gd~~~~~~l~~a------~i~~a~~vv~   68 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE-----GVEVIYGDATDPEVLERA------GIEKADAVVI   68 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT-----TSEEEES-TTSHHHHHHT------TGGCESEEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc-----ccccccccchhhhHHhhc------CccccCEEEE
Confidence            466676 4799999999999777999999999887665542     266888999998776442      1136777776


Q ss_pred             CCC
Q 023613          101 NAG  103 (280)
Q Consensus       101 ~ag  103 (280)
                      ..+
T Consensus        69 ~~~   71 (116)
T PF02254_consen   69 LTD   71 (116)
T ss_dssp             ESS
T ss_pred             ccC
Confidence            664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.45  E-value=0.076  Score=46.57  Aligned_cols=145  Identities=11%  Similarity=0.025  Sum_probs=88.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCcch--HHHHHHHhCC-C----CCeEEEecCCCCHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA-------KVCIADVQDNL--GQQVCQSLGG-E----PDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~-------~V~~~~r~~~~--~~~~~~~~~~-~----~~~~~~~~D~~~~~~~~~~   84 (280)
                      +.+.|+|++|.+|..++..|+..|.       .+++.+.+++.  ++.....+.. .    .++.+ .  -.+.+     
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~--~~~~~-----   74 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-T--DDPNV-----   74 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-e--cCcHH-----
Confidence            5789999999999999999998764       68999985432  3322222221 1    11111 1  11222     


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccc-----
Q 023613           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAG-----  158 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~-----  158 (280)
                            .+..-|++|..||....   +  ..+.   .+.+..|+.-.-.+.+.+..+   . ..+.++.+|--.-     
T Consensus        75 ------~~~daDivvitaG~~~k---~--g~tR---~dll~~N~~i~~~i~~~i~~~---~~~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          75 ------AFKDADWALLVGAKPRG---P--GMER---ADLLKANGKIFTAQGKALNDV---ASRDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             ------HhCCCCEEEEeCCCCCC---C--CCcH---HHHHHHHHHHHHHHHHHHHhh---CCCCeEEEEecCcHHHHHHH
Confidence                  22489999999997542   1  2333   345666665554444444332   2 2567777663110     


Q ss_pred             ---ccc-CCCCccchhhHHHHHHHHHHHHHHHCC
Q 023613          159 ---AIG-GLGPHAYTGSKHAVLGLNKNVAAELGK  188 (280)
Q Consensus       159 ---~~~-~~~~~~Y~~sK~al~~~~~~la~e~~~  188 (280)
                         ..+ .|....|+.++.--..|...+++.+.-
T Consensus       138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence               112 455568999998888999999988754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.44  E-value=0.028  Score=51.40  Aligned_cols=40  Identities=15%  Similarity=0.433  Sum_probs=35.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~   55 (280)
                      .+.||+++|.|.+ .||+.+|+.+...|++|+++.+++...
T Consensus       251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            5889999999987 599999999999999999998876544

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.43  E-value=0.032  Score=46.39  Aligned_cols=37  Identities=22%  Similarity=0.436  Sum_probs=30.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~   51 (280)
                      ..|++++|+|.| .||+|.++|+.|++.|.. +.+++.+
T Consensus        17 ~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             HHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            457899999998 569999999999999975 7777654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.42  E-value=0.02  Score=49.90  Aligned_cols=79  Identities=16%  Similarity=0.226  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+.+++|.|+++++|.++++.+.+.|++|+.+.++.+..+.+.+.+..  . .++  |..+.+..+. +.....  +++|
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~--~-~~~--~~~~~~~~~~-v~~~~~--~~~d  216 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF--D-AAI--NYKTPDLAEA-LKEAAP--DGID  216 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC--c-eEE--ecCChhHHHH-HHHhcc--CCce
Confidence            578999999999999999999999999999998887765554332331  1 122  2223222222 222221  4799


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++++++|
T Consensus       217 ~vi~~~g  223 (329)
T cd05288         217 VYFDNVG  223 (329)
T ss_pred             EEEEcch
Confidence            9999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.41  E-value=0.032  Score=45.52  Aligned_cols=38  Identities=32%  Similarity=0.496  Sum_probs=32.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~   51 (280)
                      ...|++++|+|.| .||+|.++++.|+..|. ++.+++.+
T Consensus        16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            3458899999998 56999999999999997 68888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.36  E-value=0.019  Score=52.77  Aligned_cols=55  Identities=13%  Similarity=0.175  Sum_probs=40.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   79 (280)
                      .++|.|+ |.+|+++++.|.++|+.|++++++++..+.+.+..    .+.++.+|.++.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~----~~~~~~gd~~~~~   56 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL----DVRTVVGNGSSPD   56 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc----CEEEEEeCCCCHH
Confidence            5788887 99999999999999999999999988766554311    2334445555443

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.34  E-value=0.066  Score=47.37  Aligned_cols=45  Identities=22%  Similarity=0.420  Sum_probs=37.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~   63 (280)
                      .|++++|.|+ +++|...++.+...|++|+++++++++++.+ +.+.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~G  210 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFG  210 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhC
Confidence            4899999999 9999999988888899999999988877654 4444

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.31  E-value=0.047  Score=40.78  Aligned_cols=76  Identities=13%  Similarity=0.274  Sum_probs=54.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-cCCeEE-EEecCc----------------------chHHHHHHHhCCCCCeEEEecCC
Q 023613           20 VALITGGATGIGESTVRLFHK-HGAKVC-IADVQD----------------------NLGQQVCQSLGGEPDTFFCHCDV   75 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~-~g~~V~-~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~D~   75 (280)
                      +++|.|++|.+|+.+++.+.+ .+..++ .++|+.                      +.++++.+.    .+   +..|+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~----~D---VvIDf   74 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE----AD---VVIDF   74 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-----S---EEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc----CC---EEEEc
Confidence            589999999999999999998 577755 456665                      223333222    23   34699


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEECCCC
Q 023613           76 TKEEDVCSAVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~d~li~~ag~  104 (280)
                      +.++.+...++...+.  ++.+|+-..|.
T Consensus        75 T~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   75 TNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             S-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             CChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            9999999999988877  88889888875

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.25  E-value=0.057  Score=48.84  Aligned_cols=43  Identities=23%  Similarity=0.462  Sum_probs=37.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~   58 (280)
                      .+.|++++|.|++ .||+.+++.+...|++|+++++++.++...
T Consensus       199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            3689999999987 799999999999999999999988766543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.24  E-value=0.062  Score=40.65  Aligned_cols=77  Identities=17%  Similarity=0.315  Sum_probs=49.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc-------------------ch---HHHHHHHhCCCCCeEEEecC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD-------------------NL---GQQVCQSLGGEPDTFFCHCD   74 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~-------------------~~---~~~~~~~~~~~~~~~~~~~D   74 (280)
                      .++++|.|+ +++|..+++.|++.|.. +.+++.+.                   .+   +++..+++.+..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            567788776 58999999999999985 88877641                   11   22233334444566666666


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023613           75 VTKEEDVCSAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~d~li~~ag  103 (280)
                      + +++...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            6 3444444442       7788887753

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.21  E-value=0.026  Score=48.80  Aligned_cols=80  Identities=20%  Similarity=0.310  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++++++|+|+++++|+++++.+...|++|+.+.++.+..+.+ ....  .. .++..+  ..+...++.+.. . ..++|
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g--~~-~~~~~~--~~~~~~~~~~~~-~-~~~~d  215 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALG--AA-HVIVTD--EEDLVAEVLRIT-G-GKGVD  215 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC--CC-EEEecC--CccHHHHHHHHh-C-CCCce
Confidence            578999999999999999999999999999998887766554 3332  11 222222  222222222211 1 12699


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      .+++++|.
T Consensus       216 ~vi~~~~~  223 (328)
T cd08268         216 VVFDPVGG  223 (328)
T ss_pred             EEEECCch
Confidence            99998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02494 adenosylhomocysteinase

Probab=96.16  E-value=0.063  Score=49.10  Aligned_cols=40  Identities=23%  Similarity=0.458  Sum_probs=35.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~   55 (280)
                      .+.||+++|.|.+ .||+.+|+.+...|++|+++++++...
T Consensus       251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            3689999999987 899999999999999999999987653

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.15  E-value=0.036  Score=47.76  Aligned_cols=79  Identities=16%  Similarity=0.282  Sum_probs=54.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +++||.+.|.|.++-+|+.++..|.++|++|.+..++....++..+.    .++.+..  +.++..+....       -+
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~----ADIVIsa--vg~~~~v~~~~-------ik  222 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ----ADIVVAA--VGRPRLIDADW-------LK  222 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc----CCEEEEe--cCChhcccHhh-------cc
Confidence            68999999999999999999999999999999997766554444332    3444433  33443333222       25


Q ss_pred             ccEEEECCCCCC
Q 023613           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 ~d~li~~ag~~~  106 (280)
                      ...+|-..|+..
T Consensus       223 ~GaiVIDvgin~  234 (301)
T PRK14194        223 PGAVVIDVGINR  234 (301)
T ss_pred             CCcEEEEecccc
Confidence            556666677653

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.15  E-value=0.048  Score=44.84  Aligned_cols=38  Identities=18%  Similarity=0.367  Sum_probs=33.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~   51 (280)
                      ...|+.++++|.|+ ||+|..+++.|++.|.. +.+++.+
T Consensus        23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34578999999996 79999999999999976 8888876

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.14  E-value=0.044  Score=49.21  Aligned_cols=36  Identities=25%  Similarity=0.442  Sum_probs=31.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~   51 (280)
                      .+++++|+|.|+ ||+|..++..|+..|.. +.+++++
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            478899999966 79999999999999974 8888887

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.14  E-value=0.02  Score=43.71  Aligned_cols=44  Identities=27%  Similarity=0.335  Sum_probs=38.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ   57 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~   57 (280)
                      .+++||.++|.|.+.-+|+.++..|.++|++|.++.++...+++
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            36899999999999999999999999999999998876544433

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.13  E-value=0.039  Score=48.14  Aligned_cols=64  Identities=19%  Similarity=0.218  Sum_probs=44.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH-----HHHHhCCCCCeEEEecCCCCH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ-----VCQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~   78 (280)
                      .+|.||++.|.|- |.||+++|+.+...|++|+..+|.......     -.+++-...++..+.+.++++
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~  209 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK  209 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch
Confidence            4689999999997 899999999999999999999875321000     011222234666666666653

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.11  E-value=0.045  Score=47.95  Aligned_cols=113  Identities=21%  Similarity=0.222  Sum_probs=66.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhC-CC----CCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLG-GE----PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+.+.|+|| |.+|..++..++..| +.+++.+.+++.++...-.+. ..    .... +.+ ..+.++          
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~----------   70 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYED----------   70 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHH----------
Confidence            4678999997 889999999999988 789999998765443222111 11    1111 111 123222          


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEcc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICS  155 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS  155 (280)
                       +..-|++|.++|....+     ..+.   .+.+..|..    +.+.+.+.+.+. .++.+++++-
T Consensus        71 -l~~ADiVVitag~~~~~-----g~~r---~dll~~n~~----i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         71 -IKDSDVVVITAGVQRKE-----EMTR---EDLLTINGK----IMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             -hCCCCEEEECCCCCCCC-----CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence             13789999999975431     2232   445566663    344444444443 3466777653

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.08  E-value=0.068  Score=47.39  Aligned_cols=74  Identities=23%  Similarity=0.443  Sum_probs=48.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC---cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .|++++|+|+ |++|...+..+...|++|++++|+   +++++ ..+.+..  .  ++  |..+. +..+    . ...+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~Ga--~--~v--~~~~~-~~~~----~-~~~~  237 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEELGA--T--YV--NSSKT-PVAE----V-KLVG  237 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCC--E--Ee--cCCcc-chhh----h-hhcC
Confidence            6899999986 999999998777889999999984   34433 3344442  2  22  32222 2221    1 1225


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       238 ~~d~vid~~g~  248 (355)
T cd08230         238 EFDLIIEATGV  248 (355)
T ss_pred             CCCEEEECcCC
Confidence            79999999973

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.07  E-value=0.065  Score=47.90  Aligned_cols=77  Identities=22%  Similarity=0.261  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   94 (280)
                      .|+++||.|+ +++|...+..+...|+ +|+++++++++++.+ +.+..  + .+  .|..+.+.    .+.+.+.. ++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga--~-~~--i~~~~~~~----~~~i~~~~~~g  259 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGA--T-AT--VNAGDPNA----VEQVRELTGGG  259 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCC--c-eE--eCCCchhH----HHHHHHHhCCC
Confidence            4889999985 8999998888778899 588888888776644 44432  1 12  23333322    22333222 37


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.+.|.
T Consensus       260 ~d~vid~~G~  269 (371)
T cd08281         260 VDYAFEMAGS  269 (371)
T ss_pred             CCEEEECCCC
Confidence            9999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.04  E-value=0.052  Score=47.88  Aligned_cols=39  Identities=18%  Similarity=0.215  Sum_probs=35.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .+|.||++.|.|. |.||+.+|+.|...|++|+..+|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4689999999998 89999999999999999999998754

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.03  E-value=0.11  Score=45.38  Aligned_cols=115  Identities=17%  Similarity=0.168  Sum_probs=66.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +.|+|++|.+|.++|..|+..+.  .+++.+.++ ......+..+......+..+.-.+  +       ..+.+..-|++
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~~~~~i~~~~~~~--~-------~~~~~~daDiv   71 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIPTAASVKGFSGEE--G-------LENALKGADVV   71 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCCcCceEEEecCCC--c-------hHHHcCCCCEE
Confidence            68999999999999999998874  589999876 222222222211111222111011  0       11223589999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccc
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  156 (280)
                      |..||....+     ..+   =.+.+..|+.-.-.+.+.+..+   ..++.+++++--
T Consensus        72 vitaG~~~~~-----g~~---R~dll~~N~~I~~~i~~~i~~~---~p~~iiivvsNP  118 (312)
T TIGR01772        72 VIPAGVPRKP-----GMT---RDDLFNVNAGIVKDLVAAVAES---CPKAMILVITNP  118 (312)
T ss_pred             EEeCCCCCCC-----Ccc---HHHHHHHhHHHHHHHHHHHHHh---CCCeEEEEecCc
Confidence            9999975421     223   2446777777555555544443   345677776643

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.01  E-value=0.068  Score=47.57  Aligned_cols=38  Identities=21%  Similarity=0.357  Sum_probs=32.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~   51 (280)
                      ...|++++|+|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34578999999988 79999999999999975 7777765

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.01  E-value=0.033  Score=46.25  Aligned_cols=74  Identities=24%  Similarity=0.333  Sum_probs=52.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      .++|.|+ |-+|..+|+.|.+.|+.|++++++++...+....   ....+.+.+|-++++-++++      -....|++|
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---~~~~~~v~gd~t~~~~L~~a------gi~~aD~vv   71 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---ELDTHVVIGDATDEDVLEEA------GIDDADAVV   71 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---hcceEEEEecCCCHHHHHhc------CCCcCCEEE
Confidence            4555555 5799999999999999999999999887663331   13567788898887654332      013667777


Q ss_pred             ECCC
Q 023613          100 NNAG  103 (280)
Q Consensus       100 ~~ag  103 (280)
                      ...|
T Consensus        72 a~t~   75 (225)
T COG0569          72 AATG   75 (225)
T ss_pred             EeeC
Confidence            6665

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.99  E-value=0.018  Score=45.04  Aligned_cols=79  Identities=18%  Similarity=0.253  Sum_probs=46.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++||.++|.|.+.-+|+.++..|.++|+.|.++....+.+++..+    ..++.+...-..+.         +...+-
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~----~ADIVVsa~G~~~~---------i~~~~i   98 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR----RADIVVSAVGKPNL---------IKADWI   98 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT----TSSEEEE-SSSTT----------B-GGGS
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee----eccEEeeeeccccc---------cccccc
Confidence            36899999999999999999999999999999998776655544333    23444443322211         222223


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      +.+.+|-..|+.
T Consensus        99 k~gavVIDvG~~  110 (160)
T PF02882_consen   99 KPGAVVIDVGIN  110 (160)
T ss_dssp             -TTEEEEE--CE
T ss_pred             cCCcEEEecCCc
Confidence            556666666654

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.99  E-value=0.078  Score=47.73  Aligned_cols=90  Identities=17%  Similarity=0.325  Sum_probs=62.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +|++|++||.|++ -+|.-+|++|+++| ..|+++.|+.++.+++++.+..         +....       +++.+...
T Consensus       175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~---------~~~~l-------~el~~~l~  237 (414)
T COG0373         175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA---------EAVAL-------EELLEALA  237 (414)
T ss_pred             ccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC---------eeecH-------HHHHHhhh
Confidence            4899999999984 68999999999999 5588999999999998887761         11122       22233334


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhh
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN  127 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n  127 (280)
                      ..|+||.+.|-..+      -.+.+.++..+..+
T Consensus       238 ~~DvVissTsa~~~------ii~~~~ve~a~~~r  265 (414)
T COG0373         238 EADVVISSTSAPHP------IITREMVERALKIR  265 (414)
T ss_pred             hCCEEEEecCCCcc------ccCHHHHHHHHhcc
Confidence            77888888764432      24555555554443

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.93  E-value=0.052  Score=46.45  Aligned_cols=79  Identities=16%  Similarity=0.205  Sum_probs=54.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +++||+++|.|.+.-+|+.++..|.++|++|.++.+....+....+    ..++.+...--  +.-+    .   ..+-+
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~----~ADIVV~avG~--~~~i----~---~~~ik  221 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTR----QADIVVAAVGK--RNVL----T---ADMVK  221 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhh----hCCEEEEcCCC--cCcc----C---HHHcC
Confidence            5799999999999999999999999999999887766554443333    23444443321  1111    1   12236


Q ss_pred             ccEEEECCCCCC
Q 023613           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 ~d~li~~ag~~~  106 (280)
                      .+.+|-++|+..
T Consensus       222 ~gavVIDVGin~  233 (285)
T PRK14189        222 PGATVIDVGMNR  233 (285)
T ss_pred             CCCEEEEccccc
Confidence            777888888764

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.87  E-value=0.051  Score=47.50  Aligned_cols=63  Identities=21%  Similarity=0.251  Sum_probs=43.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-----HHHHHHhCCCCCeEEEecCCCCH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~   78 (280)
                      .++.||++.|.|- |.||+++|+.+...|++|+..+|.....     ..+ +++-...++..+.+.++..
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l-~ell~~sDiv~l~~Plt~~  210 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPF-EEVLKQADIVTLHCPLTET  210 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCH-HHHHHhCCEEEEcCCCChH
Confidence            4689999999997 8999999999999999999887753210     011 1111124666666666543

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.86  E-value=0.049  Score=47.86  Aligned_cols=78  Identities=18%  Similarity=0.213  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|+++||+|+ +++|..+++.+...|++ |+++++++++.+.+ +.+..  +. +  .|..+.+ .+++.+ +.. ..++
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga--~~-~--i~~~~~~-~~~~~~-~~~-~~~~  232 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGA--DF-V--INSGQDD-VQEIRE-LTS-GAGA  232 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCC--CE-E--EcCCcch-HHHHHH-HhC-CCCC
Confidence            5899999986 89999999988889999 99998888776554 44442  21 2  2333332 332222 111 1269


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|.+.|.
T Consensus       233 d~vid~~g~  241 (339)
T cd08239         233 DVAIECSGN  241 (339)
T ss_pred             CEEEECCCC
Confidence            999999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.86  E-value=0.1  Score=39.91  Aligned_cols=31  Identities=23%  Similarity=0.438  Sum_probs=26.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023613           20 VALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~   51 (280)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788887 8999999999999998 48888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.85  E-value=0.027  Score=48.26  Aligned_cols=38  Identities=24%  Similarity=0.415  Sum_probs=35.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      +++||.++|+|.+.-+|+.++..|.+.|++|.++.++.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            58999999999999999999999999999999887754

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.85  E-value=0.089  Score=46.14  Aligned_cols=119  Identities=18%  Similarity=0.245  Sum_probs=67.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHH-HHHHhCC---C-CCeEEEecCCCCHHHHHHHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQ-VCQSLGG---E-PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~-~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+.+++.|.|+ |.+|..++..++..|. .|++++.+++..+. ..+..+.   . ....+..  .+|.++         
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~---------   71 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED---------   71 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH---------
Confidence            44578999995 7899999999999994 89999998875432 1111111   1 1222221  122221         


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEcc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICS  155 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS  155 (280)
                        +.+-|++|..+|....+ . -.+.++.. .+.+..|+.    +.+.+.+.+.+. ..+.+++++-
T Consensus        72 --l~~aDiVI~tag~~~~~-~-~~~~~~~r-~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         72 --IAGSDVVIVTAGLTKRP-G-KSDKEWNR-DDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             --hCCCCEEEECCCCCCCC-C-CCcCCCCH-HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence              24889999999986532 1 11111121 444555654    344444444443 3456777663

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.84  E-value=0.051  Score=47.17  Aligned_cols=77  Identities=29%  Similarity=0.371  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .+.+++|+|+++++|.++++.+...|++|+.+.++++..+.+ +.+..  .. ++  |..+.+..++    +.+..  .+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~--~~-~~--~~~~~~~~~~----~~~~~~~~~  211 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGA--DV-AV--DYTRPDWPDQ----VREALGGGG  211 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCC--CE-EE--ecCCccHHHH----HHHHcCCCC
Confidence            478999999999999999998889999999999888766554 33332  21 22  3333322222    22222  26


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      +|+++++.|
T Consensus       212 ~d~vl~~~g  220 (324)
T cd08244         212 VTVVLDGVG  220 (324)
T ss_pred             ceEEEECCC
Confidence            999999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK08223 hypothetical protein; Validated

Probab=95.83  E-value=0.061  Score=46.11  Aligned_cols=40  Identities=28%  Similarity=0.305  Sum_probs=32.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDN   53 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~   53 (280)
                      +..|+..+|+|.|++ |+|..++..|+..|.. +.+++.+.-
T Consensus        22 Q~kL~~s~VlIvG~G-GLGs~va~~LA~aGVG~i~lvD~D~V   62 (287)
T PRK08223         22 QQRLRNSRVAIAGLG-GVGGIHLLTLARLGIGKFTIADFDVF   62 (287)
T ss_pred             HHHHhcCCEEEECCC-HHHHHHHHHHHHhCCCeEEEEeCCCc
Confidence            345789999999875 9999999999999965 778877643

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.81  E-value=0.038  Score=50.11  Aligned_cols=41  Identities=20%  Similarity=0.400  Sum_probs=36.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~   56 (280)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            368999999997 68999999999999999999999876543

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.80  E-value=0.2  Score=43.67  Aligned_cols=115  Identities=19%  Similarity=0.209  Sum_probs=68.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++.|+|++|.+|.++|..|+..+  ..+++++.+  ..+...-.+... ....+..+.-.+  +       +.+.+..-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~~--~-------~y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGPE--E-------LKKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCCC--c-------hHHhcCCCC
Confidence            57899999999999999999887  358999887  222222222211 111221110001  0       112234899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccc
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  156 (280)
                      ++|..||....+     ..+   =.+.++.|..-...+.+.+.++   ..++.+++++--
T Consensus        71 ivvitaG~~~k~-----g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNP  119 (310)
T cd01337          71 VVVIPAGVPRKP-----GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNP  119 (310)
T ss_pred             EEEEeCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCc
Confidence            999999985431     223   3556777777776666666654   345777777643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.80  E-value=0.035  Score=47.32  Aligned_cols=80  Identities=19%  Similarity=0.268  Sum_probs=56.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +|+|++|.||++..|+- |=+||+ .||+|+..+-+.++..-+..+......     .|--++.++.+++.+...  .++
T Consensus       153 ~geTv~VSaAsGAvGql-~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~a-----fNYK~e~~~~~aL~r~~P--~GI  224 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQL-VGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDA-----FNYKEESDLSAALKRCFP--EGI  224 (343)
T ss_pred             CCCEEEEeeccchhHHH-HHHHHHhcCCEEEEecCChhhhhhhHhccCCccc-----eeccCccCHHHHHHHhCC--Ccc
Confidence            68999999999999975 556665 599999998888887776666553221     233344455555554332  389


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |+.+-|+|.
T Consensus       225 DiYfeNVGG  233 (343)
T KOG1196|consen  225 DIYFENVGG  233 (343)
T ss_pred             eEEEeccCc
Confidence            999999984

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.80  E-value=0.055  Score=47.06  Aligned_cols=77  Identities=17%  Similarity=0.221  Sum_probs=51.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+++++|.|+++++|.++++.....|++|+.+.+++++.+.+ +.+..  .. +  .|..+. .. +.+..+.  .+++|
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~--~~-v--~~~~~~-~~-~~~~~~~--~~~~d  215 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGA--KE-V--IPREEL-QE-ESIKPLE--KQRWA  215 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCC--CE-E--EcchhH-HH-HHHHhhc--cCCcC
Confidence            367999999999999999988888999999999888776555 33432  11 1  122221 11 1122221  14689


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++++.|
T Consensus       216 ~vld~~g  222 (326)
T cd08289         216 GAVDPVG  222 (326)
T ss_pred             EEEECCc
Confidence            9998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.80  E-value=0.077  Score=43.35  Aligned_cols=42  Identities=29%  Similarity=0.502  Sum_probs=35.1

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      |.+.+++||.+||.||+ .+|..-++.|++.|++|.+++.+..
T Consensus         2 P~~l~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         2 PVFANLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             CeEEEcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            34567999999999975 6788889999999999999887653

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.78  E-value=0.052  Score=49.87  Aligned_cols=77  Identities=22%  Similarity=0.328  Sum_probs=57.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +..+.++|.|+ |.+|+.+++.|.+.|..|++++++++..+.+.+..   ..+.++..|.++++.+.++      ...+.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~---~~~~~i~gd~~~~~~L~~~------~~~~a  298 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL---PNTLVLHGDGTDQELLEEE------GIDEA  298 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC---CCCeEEECCCCCHHHHHhc------CCccC
Confidence            45788999999 99999999999999999999999988776655543   2355778899988665332      11367


Q ss_pred             cEEEECC
Q 023613           96 DIMVNNA  102 (280)
Q Consensus        96 d~li~~a  102 (280)
                      |.+|...
T Consensus       299 ~~vi~~~  305 (453)
T PRK09496        299 DAFIALT  305 (453)
T ss_pred             CEEEECC
Confidence            7776544

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.75  E-value=0.073  Score=48.33  Aligned_cols=85  Identities=13%  Similarity=0.105  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .|.+++|.|+++++|...++.+...|+   +|+++++++++++...+....     .....+  .|..+.++..+.+.++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~--i~~~~~~~~~~~v~~~  252 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY--VNPATIDDLHATLMEL  252 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE--ECCCccccHHHHHHHH
Confidence            478999999999999998876666554   699999998887765443221     111122  2333222332222222


Q ss_pred             HHHcCCccEEEECCCC
Q 023613           89 VEKFGTLDIMVNNAGI  104 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~  104 (280)
                      .. ..++|++|.+.|.
T Consensus       253 t~-g~g~D~vid~~g~  267 (410)
T cd08238         253 TG-GQGFDDVFVFVPV  267 (410)
T ss_pred             hC-CCCCCEEEEcCCC
Confidence            21 1268999998763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.75  E-value=0.099  Score=42.47  Aligned_cols=70  Identities=17%  Similarity=0.185  Sum_probs=48.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC------------CCCeEEEecCCCCHHHHHHHHHH
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG------------EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .+..||+|.||.+++++|++.|+.|++..|+. +.++...+.+..            ..++.++.+-   .+.+..++++
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence            45678899999999999999999998886654 444444444422            1456666554   3456666778


Q ss_pred             HHHHcC
Q 023613           88 TVEKFG   93 (280)
Q Consensus        88 ~~~~~~   93 (280)
                      +.+.++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            877664

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.73  E-value=0.25  Score=45.38  Aligned_cols=76  Identities=22%  Similarity=0.340  Sum_probs=50.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +.+|+++|+|.+ ++|.++|+.|+++|+.|++.+.+.....  .+.+... ..+.+...... ..    ..       ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~--~~~l~~~~~gi~~~~g~~~-~~----~~-------~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPER--VAQIGKMFDGLVFYTGRLK-DA----LD-------NG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchh--HHHHhhccCCcEEEeCCCC-HH----HH-------hC
Confidence            568999999986 9999999999999999999987654311  1112210 12333332221 11    11       37


Q ss_pred             ccEEEECCCCCC
Q 023613           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 ~d~li~~ag~~~  106 (280)
                      .|.||..+|+..
T Consensus        68 ~d~vv~spgi~~   79 (445)
T PRK04308         68 FDILALSPGISE   79 (445)
T ss_pred             CCEEEECCCCCC
Confidence            899999999863

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.73  E-value=0.11  Score=44.44  Aligned_cols=77  Identities=18%  Similarity=0.198  Sum_probs=48.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|+++||.|+ +++|...++.+...|++ |+++++++++++. .+.+..  .. ++  |..+.   .+.+.++.. -.++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~-a~~~Ga--~~-~i--~~~~~---~~~~~~~~~-~~g~  188 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRREL-ALSFGA--TA-LA--EPEVL---AERQGGLQN-GRGV  188 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHcCC--cE-ec--Cchhh---HHHHHHHhC-CCCC
Confidence            6889999986 89999998888788987 8888777766544 344432  11 11  22211   111222211 1368


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|.+.|.
T Consensus       189 d~vid~~G~  197 (280)
T TIGR03366       189 DVALEFSGA  197 (280)
T ss_pred             CEEEECCCC
Confidence            999998874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK08328 hypothetical protein; Provisional

Probab=95.73  E-value=0.096  Score=43.65  Aligned_cols=40  Identities=18%  Similarity=0.293  Sum_probs=32.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcch
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNL   54 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~   54 (280)
                      ..+++++|+|.|++ |+|.+++..|+..|.. +.+++.+.-.
T Consensus        23 ~~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~ve   63 (231)
T PRK08328         23 EKLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQTPE   63 (231)
T ss_pred             HHHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCccC
Confidence            35788999999875 9999999999999965 7788766433

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.72  E-value=0.084  Score=47.09  Aligned_cols=79  Identities=13%  Similarity=0.198  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   94 (280)
                      .|.++||.|+ +++|...++.+...|+ +|+.+++++++++.+ +.+..  +. +  .|..+. +++.+.+.++..  ++
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa--~~-~--i~~~~~~~~~~~~v~~~~~--~g  256 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGA--TD-C--VNPKDHDKPIQQVLVEMTD--GG  256 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCC--CE-E--EcccccchHHHHHHHHHhC--CC
Confidence            4899999975 8999999998888999 599999988877654 44442  21 2  233332 234333333322  47


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|+++.+.|.
T Consensus       257 ~d~vid~~g~  266 (368)
T cd08300         257 VDYTFECIGN  266 (368)
T ss_pred             CcEEEECCCC
Confidence            9999998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.70  E-value=0.85  Score=38.92  Aligned_cols=236  Identities=13%  Similarity=0.050  Sum_probs=124.2

Q ss_pred             CcEEEEEcCCChHHHHH--HHHHHHcCCeEEEEe--c-----CcchH-----HHHHHHhCCC-CCeEEEecCCCCHHHHH
Q 023613           18 GRVALITGGATGIGEST--VRLFHKHGAKVCIAD--V-----QDNLG-----QQVCQSLGGE-PDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        18 ~k~vlItGa~~giG~~l--a~~l~~~g~~V~~~~--r-----~~~~~-----~~~~~~~~~~-~~~~~~~~D~~~~~~~~   82 (280)
                      .|+|||.|+|+|.|.+.  +..|- .|+..+.+.  |     ++...     ....+..+.. --..-+..|..+.+--+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            68999999999988763  33333 456655442  2     11110     0111222222 23445678988888888


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCC-CCCC-------------------------------CCCCCCHHHHHHHhhhhhHh
Q 023613           83 SAVDLTVEKFGTLDIMVNNAGISG-APCP-------------------------------DIREADLSEFEKVFDINVKG  130 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag~~~-~~~~-------------------------------~~~~~~~~~~~~~~~~n~~~  130 (280)
                      ..++.+++.+|++|.+|+.-.-.. ..++                               .++..+.++++.+..+-=--
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe  199 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE  199 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcc
Confidence            999999999999999998743221 1001                               12233445555544332111


Q ss_pred             HH-HHHHHHHHhcccCCCceEE---EEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecccc
Q 023613          131 VF-HGMKHAARIMIPQTKGTII---SICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       131 ~~-~l~~~~~~~l~~~~~~~iv---~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~  206 (280)
                      -| ..+++++..-.-..+.+-+   ++++--. ++..-.+.-+.+|.=|+.-+..+...++..|=+.++.-.-.+-|.-.
T Consensus       200 DWq~WidaLl~advlaeg~kTiAfsYiG~~iT-~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVTqAS  278 (398)
T COG3007         200 DWQMWIDALLEADVLAEGAKTIAFSYIGEKIT-HPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVTQAS  278 (398)
T ss_pred             hHHHHHHHHHhccccccCceEEEEEecCCccc-cceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHhhhh
Confidence            12 3344444431112223333   3433221 22223467788999999999999999988765555554445544432


Q ss_pred             ccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          207 LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      .- .|.-+.+.      ...++.+    ..-.+-|-+.+.+..|.++.  -..|+.+.+|..
T Consensus       279 sa-IP~~plYl------a~lfkvM----Kekg~HEgcIeQi~rlfse~--ly~g~~~~~D~e  327 (398)
T COG3007         279 SA-IPMMPLYL------AILFKVM----KEKGTHEGCIEQIDRLFSEK--LYSGSKIQLDDE  327 (398)
T ss_pred             hc-cccccHHH------HHHHHHH----HHcCcchhHHHHHHHHHHHH--hhCCCCCCcCcc
Confidence            21 11111111      1111111    12235567777777777542  223666666643

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.69  E-value=0.067  Score=37.08  Aligned_cols=36  Identities=25%  Similarity=0.558  Sum_probs=31.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEec
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r   50 (280)
                      .++++|+++|.|+ ++.|+.+++.|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3578999999999 99999999999998 566777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.68  E-value=0.075  Score=46.33  Aligned_cols=78  Identities=24%  Similarity=0.322  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++.+++|.|+++++|.+++......|++|+.+.++++..+.+ +.+..  + .++  |..+. +..+.+.....  +++|
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~--~-~v~--~~~~~-~~~~~~~~~~~--~~vd  209 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGC--D-RPI--NYKTE-DLGEVLKKEYP--KGVD  209 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCC--c-eEE--eCCCc-cHHHHHHHhcC--CCCe
Confidence            588999999999999999888888899999988887765554 33331  1 122  22222 22222222221  4699


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .++++.|
T Consensus       210 ~v~~~~g  216 (329)
T cd08250         210 VVYESVG  216 (329)
T ss_pred             EEEECCc
Confidence            9998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.66  E-value=0.023  Score=46.36  Aligned_cols=40  Identities=18%  Similarity=0.256  Sum_probs=35.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      -..+++||.+||.|| |.+|...++.|.+.|++|.+++++.
T Consensus         4 l~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          4 LMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            456899999999998 8899999999999999999988754

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.63  E-value=0.058  Score=48.19  Aligned_cols=79  Identities=16%  Similarity=0.222  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   94 (280)
                      .|.++||.|+ +++|...+..+...|+ +|+.+++++++++.+ +.+..  .. +  .|..+ .+++.+.+.++..  ++
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga--~~-~--i~~~~~~~~~~~~v~~~~~--~g  255 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGA--TD-C--VNPNDYDKPIQEVIVEITD--GG  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCC--Ce-E--EcccccchhHHHHHHHHhC--CC
Confidence            4889999985 8999999888878898 699998888876655 33442  21 1  13332 2223222332222  37


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       256 ~d~vid~~G~  265 (368)
T TIGR02818       256 VDYSFECIGN  265 (368)
T ss_pred             CCEEEECCCC
Confidence            9999999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.63  E-value=0.4  Score=41.77  Aligned_cols=109  Identities=13%  Similarity=0.159  Sum_probs=67.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHH-HHHHhCCC---CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQ-VCQSLGGE---PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~-~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+.|.|+ |.+|..++..|+..|  ..|++++++++..+. ..+..+..   ....+..   .+.+           ...
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-----------~l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-----------DCK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-----------HhC
Confidence            4788898 899999999999999  579999999876653 22222211   1111111   1222           124


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .-|++|.++|....+     ..   +..+.+..|+.-.-.+.+.+..+   ..+|.++.++
T Consensus        67 ~aDiViita~~~~~~-----~~---~r~dl~~~n~~i~~~~~~~l~~~---~~~giiiv~t  116 (308)
T cd05292          67 GADVVVITAGANQKP-----GE---TRLDLLKRNVAIFKEIIPQILKY---APDAILLVVT  116 (308)
T ss_pred             CCCEEEEccCCCCCC-----CC---CHHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEec
Confidence            889999999975421     12   23455666666655555555543   2457777765

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.63  E-value=0.14  Score=45.07  Aligned_cols=88  Identities=17%  Similarity=0.185  Sum_probs=56.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH------HHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV------CQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ..+.|+++.|.|. |.||+++|+.|...|++|++.+|+.+.....      .+++-...++.++.+..+.. ...-+.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~  219 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKA  219 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHH
Confidence            4689999999986 6699999999999999999999876432221      11122235677777766542 22222333


Q ss_pred             HHHHcCCccEEEECCCC
Q 023613           88 TVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~  104 (280)
                      +.+.. +.+.++-|++-
T Consensus       220 ~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        220 MFDHV-KKGAILVNAAR  235 (330)
T ss_pred             HHhcC-CCCcEEEEcCC
Confidence            33332 45666666654

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.62  E-value=0.013  Score=42.29  Aligned_cols=39  Identities=28%  Similarity=0.448  Sum_probs=33.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      +.+++||.+||.|+ |.+|..-++.|.+.|++|.+++.+.
T Consensus         2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            35789999999999 8999999999999999999999886

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=95.61  E-value=0.12  Score=45.46  Aligned_cols=87  Identities=16%  Similarity=0.074  Sum_probs=52.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecCcchHH--H------HHHHhCCCCCeEEEecCCCCHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFH-KHGAKVCIADVQDNLGQ--Q------VCQSLGGEPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~-~~g~~V~~~~r~~~~~~--~------~~~~~~~~~~~~~~~~D~~~~~~~~~~   84 (280)
                      .+|.||++.|.|- |.||+++|+.+. ..|++|+..+|......  .      -.+++-...++..+.+.++...  +.+
T Consensus       141 ~~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T--~~l  217 (323)
T PRK15409        141 TDVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDET--HHL  217 (323)
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHH--hhc
Confidence            3689999999997 899999999997 78999998887632111  0      0111112356667777666532  222


Q ss_pred             HHH-HHHHcCCccEEEECCCC
Q 023613           85 VDL-TVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        85 ~~~-~~~~~~~~d~li~~ag~  104 (280)
                      +.. ..++ -+.+.++-|.+-
T Consensus       218 i~~~~l~~-mk~ga~lIN~aR  237 (323)
T PRK15409        218 FGAEQFAK-MKSSAIFINAGR  237 (323)
T ss_pred             cCHHHHhc-CCCCeEEEECCC
Confidence            221 1222 255666666654

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.60  E-value=0.069  Score=48.94  Aligned_cols=41  Identities=24%  Similarity=0.473  Sum_probs=35.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   60 (280)
                      ++.|.||.|.+|.++++.|.+.|++|++.+|+++...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            58999999999999999999999999999998776544433

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.59  E-value=0.17  Score=43.31  Aligned_cols=92  Identities=13%  Similarity=0.152  Sum_probs=58.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +++||.++|.|.|.-+|+-++..|.++|++|.++.+....+....+.    .++.+..+--...         +...+-+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~----ADIvIsAvGkp~~---------i~~~~vk  221 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTK----ADILIVAVGKPNF---------ITADMVK  221 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhh----cCEEEEccCCcCc---------CCHHHcC
Confidence            58899999999999999999999999999999887765544443332    3444443322111         1112226


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSE  119 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~  119 (280)
                      .+.+|-.+|+.....+-.-+.+.+.
T Consensus       222 ~gavVIDvGin~~~gkl~GDvd~~~  246 (282)
T PRK14180        222 EGAVVIDVGINHVDGKIVGDVDFAA  246 (282)
T ss_pred             CCcEEEEecccccCCceeCCcCHHH
Confidence            6677777887542113334455443

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.58  E-value=0.059  Score=46.82  Aligned_cols=78  Identities=14%  Similarity=0.126  Sum_probs=52.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|.++||.|+++++|.++++.....|++|+.+.++.+..+.+.+ +.  .+ .++  +..+. +.   .+.+.+..  .+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g--~~-~~~--~~~~~-~~---~~~i~~~~~~~~  208 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LG--IG-PVV--STEQP-GW---QDKVREAAGGAP  208 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cC--CC-EEE--cCCCc-hH---HHHHHHHhCCCC
Confidence            58899999999999999999888999999998888776655543 32  22 122  22222 22   22233322  26


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|+++.+.|.
T Consensus       209 ~d~v~d~~g~  218 (324)
T cd08292         209 ISVALDSVGG  218 (324)
T ss_pred             CcEEEECCCC
Confidence            9999998873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.57  E-value=0.12  Score=41.10  Aligned_cols=31  Identities=23%  Similarity=0.419  Sum_probs=27.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc
Q 023613           21 ALITGGATGIGESTVRLFHKHGAK-VCIADVQD   52 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~   52 (280)
                      ++|.|+ ||+|..++..|++.|.. +.+++.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            678885 89999999999999985 99988875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.57  E-value=0.087  Score=45.85  Aligned_cols=31  Identities=26%  Similarity=0.442  Sum_probs=26.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc
Q 023613           21 ALITGGATGIGESTVRLFHKHGAK-VCIADVQD   52 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~   52 (280)
                      |+|.|+ ||+|.++++.|+..|.. +.+++.+.
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~   33 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDT   33 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCC
Confidence            688886 89999999999999976 77877654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.56  E-value=0.57  Score=39.30  Aligned_cols=78  Identities=19%  Similarity=0.240  Sum_probs=56.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-C-C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-T   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~-~   94 (280)
                      .|.++||--|.+|.|..+|+.+-..|++++.+..+.++.+...+    ++--+.|  |.+.++-    ++++++.. | +
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake----nG~~h~I--~y~~eD~----v~~V~kiTngKG  215 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE----NGAEHPI--DYSTEDY----VDEVKKITNGKG  215 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh----cCCccee--eccchhH----HHHHHhccCCCC
Confidence            59999999999999999999999999999999888887665543    2222233  4444333    44454433 3 6


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|+++-..|.
T Consensus       216 Vd~vyDsvG~  225 (336)
T KOG1197|consen  216 VDAVYDSVGK  225 (336)
T ss_pred             ceeeeccccc
Confidence            9988877774

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.55  E-value=0.12  Score=46.11  Aligned_cols=74  Identities=24%  Similarity=0.412  Sum_probs=49.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||.|+ +++|..+++.+...|++|++++.+.++.....+.+..  +. ++  |..+.+.+.       +..+++|
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga--~~-vi--~~~~~~~~~-------~~~~~~D  249 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGA--DS-FL--VSTDPEKMK-------AAIGTMD  249 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCC--cE-EE--cCCCHHHHH-------hhcCCCC
Confidence            5889999775 8999999988888899998887776655544444442  21 21  223332222       2224689


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|.+.|
T Consensus       250 ~vid~~g  256 (360)
T PLN02586        250 YIIDTVS  256 (360)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.55  E-value=0.072  Score=46.66  Aligned_cols=37  Identities=24%  Similarity=0.390  Sum_probs=33.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~   51 (280)
                      .++.||++.|.|- |.||+++|+.+...|++|+..+|.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            3689999999997 899999999999999999998875

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.55  E-value=0.061  Score=46.41  Aligned_cols=78  Identities=24%  Similarity=0.296  Sum_probs=53.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++||.++|.|-+.-+|+.+|+.|.+.|+.|.++. |+.+ +++..+    ..++.+..  +.++..++..+       -
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~----~ADIVIsa--vg~~~~v~~~~-------l  220 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCR----RADILVAA--VGRPEMVKGDW-------I  220 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHh----cCCEEEEe--cCChhhcchhe-------e
Confidence            58999999999999999999999999999999985 6643 333222    23444432  34444333222       2


Q ss_pred             CccEEEECCCCCC
Q 023613           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~~d~li~~ag~~~  106 (280)
                      +...+|-..|+..
T Consensus       221 k~GavVIDvGin~  233 (296)
T PRK14188        221 KPGATVIDVGINR  233 (296)
T ss_pred             cCCCEEEEcCCcc
Confidence            5566777777754

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.55  E-value=0.11  Score=44.77  Aligned_cols=76  Identities=22%  Similarity=0.365  Sum_probs=51.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +|.+++|.|+++++|.++++.....|++|+.+.++++..+.+ ..+.  .+. ++. +  +. +..   +.+.+..+++|
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~-~~~-~--~~-~~~---~~i~~~~~~~d  210 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELG--ADE-VVI-D--DG-AIA---EQLRAAPGGFD  210 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcC--CcE-EEe-c--Cc-cHH---HHHHHhCCCce
Confidence            588999999999999999999889999999988887665544 3333  121 121 1  11 111   12222224799


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .++++.|
T Consensus       211 ~vl~~~~  217 (320)
T cd08243         211 KVLELVG  217 (320)
T ss_pred             EEEECCC
Confidence            9999886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.54  E-value=0.12  Score=46.56  Aligned_cols=83  Identities=13%  Similarity=0.150  Sum_probs=55.2

Q ss_pred             CCCCCCCCCCccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH
Q 023613            1 MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED   80 (280)
Q Consensus         1 m~~~~~~~~~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   80 (280)
                      |.+-.++-.+      +.|+++|+|++ -+|+.+++.+.+.|++|++++.+++.....   ..   + .++..|..|.+.
T Consensus         1 ~~~~~~~~~~------~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~a---d-~~~~~~~~d~~~   66 (395)
T PRK09288          1 MTRLGTPLSP------SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VA---H-RSHVIDMLDGDA   66 (395)
T ss_pred             CccccCCCCC------CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hh---h-heEECCCCCHHH
Confidence            4455554433      35689999876 589999999999999999988876432111   11   1 145567788877


Q ss_pred             HHHHHHHHHHHcCCccEEEECC
Q 023613           81 VCSAVDLTVEKFGTLDIMVNNA  102 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~d~li~~a  102 (280)
                      +.+++++     .++|.++...
T Consensus        67 l~~~~~~-----~~id~vi~~~   83 (395)
T PRK09288         67 LRAVIER-----EKPDYIVPEI   83 (395)
T ss_pred             HHHHHHH-----hCCCEEEEee
Confidence            7666553     2788887643

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.54  E-value=0.1  Score=42.41  Aligned_cols=37  Identities=24%  Similarity=0.352  Sum_probs=30.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~   51 (280)
                      ..+++++|+|.|+ +|+|.++++.|+..|.. +.+++.+
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            3578899999985 45999999999999976 7777765

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.50  E-value=0.16  Score=46.31  Aligned_cols=113  Identities=12%  Similarity=0.012  Sum_probs=72.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc-------CC--eEEEEecCcchHHHHHHHhCCCC-----CeEEEecCCCCHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKH-------GA--KVCIADVQDNLGQQVCQSLGGEP-----DTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~   83 (280)
                      --.+.|+|++|.+|.+++..|+..       +.  ++++++++++.++...-++....     ++. +..  .+.++   
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye~---  173 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYEV---  173 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHHH---
Confidence            346899999999999999999987       54  58999999988877666554321     111 111  22222   


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        84 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                              +..-|++|..||....   +  ..+   =.+.++.|..-.-.+.+.+.+.  ...++.||.++
T Consensus       174 --------~kdaDiVVitAG~prk---p--G~t---R~dLl~~N~~I~k~i~~~I~~~--a~p~~ivIVVs  226 (444)
T PLN00112        174 --------FQDAEWALLIGAKPRG---P--GME---RADLLDINGQIFAEQGKALNEV--ASRNVKVIVVG  226 (444)
T ss_pred             --------hCcCCEEEECCCCCCC---C--CCC---HHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEcC
Confidence                    2489999999997532   1  223   2456666766555544444432  13457777766

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.49  E-value=0.15  Score=42.81  Aligned_cols=38  Identities=21%  Similarity=0.369  Sum_probs=31.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~   52 (280)
                      ..|++++|+|.|++ |+|..++..|+..|.. +.+++.+.
T Consensus        20 ~~L~~~~VlvvG~G-glGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        20 EALKASRVLIVGLG-GLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHHhCCcEEEECcC-HHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            35788999999765 9999999999999965 77877764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.49  E-value=0.37  Score=41.85  Aligned_cols=109  Identities=15%  Similarity=0.202  Sum_probs=68.3

Q ss_pred             EEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           22 LITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        22 lItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|.|+ |++|..++..++..|  ..+++++++++..+.....+...    ....+..+  .+.++           ...-
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~-----------l~~a   67 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYAD-----------AADA   67 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHH-----------hCCC
Confidence            57787 579999999999988  57999999988777666655421    11122211  22222           2489


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      |++|.++|....+     ..+.   .+.+..|+.-...+.+.+..+   ..++.+++++-
T Consensus        68 DiVIitag~p~~~-----~~~R---~~l~~~n~~i~~~~~~~i~~~---~p~~~viv~sN  116 (300)
T cd00300          68 DIVVITAGAPRKP-----GETR---LDLINRNAPILRSVITNLKKY---GPDAIILVVSN  116 (300)
T ss_pred             CEEEEcCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccC
Confidence            9999999985421     2232   345556665555555554443   34577777763

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.47  E-value=0.15  Score=41.36  Aligned_cols=38  Identities=21%  Similarity=0.337  Sum_probs=31.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~   52 (280)
                      ..|++.+|+|.|+++ +|.++++.|+..|.. +.+++.+.
T Consensus        15 ~~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          15 NKLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             HHHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence            357889999998775 999999999999976 77887653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.46  E-value=0.066  Score=41.76  Aligned_cols=41  Identities=20%  Similarity=0.395  Sum_probs=31.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~   56 (280)
                      .+.||+++|.| -+.+|+.+|+.|...|++|+++..++-..-
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            47899999887 578999999999999999999999875433

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.45  E-value=0.35  Score=42.41  Aligned_cols=111  Identities=14%  Similarity=0.100  Sum_probs=67.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCc--chHHHHHHHhCCCC-----CeEEEecCCCCHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGA-------KVCIADVQD--NLGQQVCQSLGGEP-----DTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~   85 (280)
                      .+.|+|++|++|..++..|+..|.       .+++.+.++  +.++.....+....     .+. +..  .+.+      
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~--~~~~------   75 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-ATT--DPEE------   75 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Eec--ChHH------
Confidence            578999999999999999998873       689999865  32343333332111     111 111  1111      


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        86 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                           .+..-|++|..||....   +  ..+   =.+.++.|+.-.-.+.+.+.++-.  +++.++.+|
T Consensus        76 -----~~~daDvVVitAG~~~k---~--g~t---R~dll~~Na~i~~~i~~~i~~~~~--~~~iiivvs  129 (323)
T TIGR01759        76 -----AFKDVDAALLVGAFPRK---P--GME---RADLLSKNGKIFKEQGKALNKVAK--KDVKVLVVG  129 (323)
T ss_pred             -----HhCCCCEEEEeCCCCCC---C--CCc---HHHHHHHHHHHHHHHHHHHHhhCC--CCeEEEEeC
Confidence                 22488999999997532   1  233   355677777666655555555311  256777765

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.45  E-value=0.1  Score=45.20  Aligned_cols=77  Identities=17%  Similarity=0.226  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|.+++|.|+++++|.++++.+...|++|+.+.++++..+.+ +.+.  .+. +  .|..+.+..+    .+.+..  .+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~-~--~~~~~~~~~~----~~~~~~~~~~  207 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALG--ADE-V--IDSSPEDLAQ----RVKEATGGAG  207 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcC--CCE-E--ecccchhHHH----HHHHHhcCCC
Confidence            578999999999999999999999999999988887765544 3333  111 1  1222222222    222222  36


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      +|.++.+.|
T Consensus       208 ~d~vl~~~g  216 (323)
T cd05282         208 ARLALDAVG  216 (323)
T ss_pred             ceEEEECCC
Confidence            999999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.39  E-value=0.052  Score=46.45  Aligned_cols=41  Identities=20%  Similarity=0.327  Sum_probs=35.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~   55 (280)
                      +++||.++|.|.+.-+|+.++..|.++|++|.++......+
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l  194 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL  194 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            67899999999999999999999999999998876544333

>PRK14967 putative methyltransferase; Provisional

Probab=95.37  E-value=0.4  Score=39.62  Aligned_cols=76  Identities=20%  Similarity=0.139  Sum_probs=48.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+.++|-.|+++|.   ++..+++.+. +|++++.++..++...+.... ..++.++..|+.+.      +     ..++
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~-----~~~~  101 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------V-----EFRP  101 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------c-----cCCC
Confidence            36789999987755   3444555565 799999998776654443322 12466666676431      1     1147


Q ss_pred             ccEEEECCCCCC
Q 023613           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 ~d~li~~ag~~~  106 (280)
                      .|.+|.|.+...
T Consensus       102 fD~Vi~npPy~~  113 (223)
T PRK14967        102 FDVVVSNPPYVP  113 (223)
T ss_pred             eeEEEECCCCCC
Confidence            999999987643

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.36  E-value=0.041  Score=47.01  Aligned_cols=44  Identities=14%  Similarity=0.277  Sum_probs=38.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHh
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~   62 (280)
                      +|+++|.|+ ||-+++++..|++.|+. |.++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999996 89999999999999985 999999998888877654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.35  E-value=0.048  Score=45.03  Aligned_cols=42  Identities=17%  Similarity=0.238  Sum_probs=36.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~   61 (280)
                      ++.|.||+|.+|.++++.|++.|++|++.+|+++..+.+.+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            478999999999999999999999999999998877665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PLN02740 Alcohol dehydrogenase-like

Probab=95.34  E-value=0.12  Score=46.29  Aligned_cols=79  Identities=19%  Similarity=0.218  Sum_probs=52.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   94 (280)
                      .|+++||.|+ +++|...++.+...|+ +|+++++++++++.. +.+..  +. ++  |..+. ++..+.+.++..  ++
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga--~~-~i--~~~~~~~~~~~~v~~~~~--~g  268 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGI--TD-FI--NPKDSDKPVHERIREMTG--GG  268 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCC--cE-EE--ecccccchHHHHHHHHhC--CC
Confidence            5899999986 8999999998888899 599999988876655 33432  21 22  33322 123222333222  26


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       269 ~dvvid~~G~  278 (381)
T PLN02740        269 VDYSFECAGN  278 (381)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.34  E-value=0.095  Score=45.98  Aligned_cols=37  Identities=16%  Similarity=0.250  Sum_probs=32.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      +|+++||.|+++++|.++++.....|++|+.+.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            5899999999999999999999999999888877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.33  E-value=0.47  Score=41.46  Aligned_cols=113  Identities=9%  Similarity=0.069  Sum_probs=70.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ...+.|+|+ |.+|..+|..|+..|.  .+++++.+++.++.....+...    ....+...  .+.++           
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------
Confidence            346899996 9999999999998764  4899999887665554444321    11122211  22222           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      +..-|++|..||....   +  ..+.   .+.+..|..-...+.+.+.++   ..++.+++++-
T Consensus        69 ~~~adivvitaG~~~k---~--g~~R---~dll~~N~~i~~~~~~~i~~~---~p~~~vivvsN  121 (312)
T cd05293          69 TANSKVVIVTAGARQN---E--GESR---LDLVQRNVDIFKGIIPKLVKY---SPNAILLVVSN  121 (312)
T ss_pred             hCCCCEEEECCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEccC
Confidence            2488999999997542   1  2333   345666666555555555443   34577777763

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.31  E-value=0.076  Score=45.70  Aligned_cols=42  Identities=29%  Similarity=0.394  Sum_probs=36.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~   58 (280)
                      ++++++|+|+++++|.+++..+...|+.|+.+.++.+..+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            588999999999999999999999999999998887665544

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=95.27  E-value=0.22  Score=43.62  Aligned_cols=91  Identities=19%  Similarity=0.212  Sum_probs=55.5

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH---------HHhCCCCCeEEEecCCCCHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---------QSLGGEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~~~~D~~~~~~~   81 (280)
                      +...+++||++.|.|. |.||+++|++|-..|+.+.-..|.+...+...         +++....++.++.|-++.. ..
T Consensus       155 ~~g~~~~gK~vgilG~-G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~-T~  232 (336)
T KOG0069|consen  155 PLGYDLEGKTVGILGL-GRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKE-TR  232 (336)
T ss_pred             cccccccCCEEEEecC-cHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHH-HH
Confidence            3456789999999987 57999999999999966667777654333321         1222235677777776532 22


Q ss_pred             HHHHHHHHHHcCCccEEEECCCC
Q 023613           82 CSAVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        82 ~~~~~~~~~~~~~~d~li~~ag~  104 (280)
                      .-+=.+..+.. +..+++-|.+-
T Consensus       233 ~liNk~~~~~m-k~g~vlVN~aR  254 (336)
T KOG0069|consen  233 HLINKKFIEKM-KDGAVLVNTAR  254 (336)
T ss_pred             HHhhHHHHHhc-CCCeEEEeccc
Confidence            22223333443 44444444443

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.26  E-value=0.16  Score=45.48  Aligned_cols=75  Identities=21%  Similarity=0.410  Sum_probs=49.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|++++|.|+ +++|...++.....|++|++++++++...+..+.+..  +. ++  |..+.+.+       .+..+++|
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa--~~-~i--~~~~~~~v-------~~~~~~~D  244 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGA--DS-FL--VTTDSQKM-------KEAVGTMD  244 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCC--cE-EE--cCcCHHHH-------HHhhCCCc
Confidence            5889999986 8999999998888899999888876554444444442  21 21  33332222       22224699


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      +++.+.|.
T Consensus       245 ~vid~~G~  252 (375)
T PLN02178        245 FIIDTVSA  252 (375)
T ss_pred             EEEECCCc
Confidence            99999874

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.26  E-value=0.25  Score=39.45  Aligned_cols=95  Identities=23%  Similarity=0.231  Sum_probs=64.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +..++.||+|+=.||+.|+   ++-..+-.| .+|+.++.+++.++...+.... .+++.++.+|+++..          
T Consensus        40 ~~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~----------  106 (198)
T COG2263          40 LRGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR----------  106 (198)
T ss_pred             HcCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC----------
Confidence            4457899999999998765   222223345 4599999999877766555543 368999999998753          


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhh
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDI  126 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~  126 (280)
                         ++.|.+|-|......    .+..+..-+++.+++
T Consensus       107 ---~~~dtvimNPPFG~~----~rhaDr~Fl~~Ale~  136 (198)
T COG2263         107 ---GKFDTVIMNPPFGSQ----RRHADRPFLLKALEI  136 (198)
T ss_pred             ---CccceEEECCCCccc----cccCCHHHHHHHHHh
Confidence               588999999877643    233454444444433

>PLN03139 formate dehydrogenase; Provisional

Probab=95.26  E-value=0.24  Score=44.47  Aligned_cols=39  Identities=18%  Similarity=0.209  Sum_probs=34.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      ..++.||++.|.| .|.||+.+++.|...|++|+..+|..
T Consensus       194 ~~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        194 AYDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             CcCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence            3579999999999 57899999999999999999988864

>PRK07877 hypothetical protein; Provisional

Probab=95.25  E-value=0.12  Score=50.15  Aligned_cols=80  Identities=19%  Similarity=0.206  Sum_probs=52.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcc------------------hH---HHHHHHhCCCCCeE
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDN------------------LG---QQVCQSLGGEPDTF   69 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~------------------~~---~~~~~~~~~~~~~~   69 (280)
                      ...|++++|+|.|+ | +|..++..|+..|-  ++.+++.+.-                  +.   ++....++...++.
T Consensus       102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~  179 (722)
T PRK07877        102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE  179 (722)
T ss_pred             HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence            33578999999999 4 99999999999994  6888876521                  11   12233334445666


Q ss_pred             EEecCCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 023613           70 FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA  102 (280)
Q Consensus        70 ~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~a  102 (280)
                      .+...++ ++.+.++++       +.|+||.+.
T Consensus       180 ~~~~~i~-~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        180 VFTDGLT-EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             EEeccCC-HHHHHHHhc-------CCCEEEECC
Confidence            6666665 455554443       566666665

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.24  E-value=0.11  Score=44.47  Aligned_cols=77  Identities=19%  Similarity=0.260  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      +|++++|.|+++++|.++++.+...|++|+.+.++++..+.+ ..+.  ... ++..  .+.+.    .+.+.+..  .+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~-~~~~--~~~~~----~~~~~~~~~~~~  205 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAG--ADH-VINY--RDEDF----VERVREITGGRG  205 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCC--CCE-EEeC--CchhH----HHHHHHHcCCCC
Confidence            589999999999999999998888999999988887766554 3333  221 2221  12222    22232222  36


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      +|.++++.|
T Consensus       206 ~d~vl~~~~  214 (320)
T cd05286         206 VDVVYDGVG  214 (320)
T ss_pred             eeEEEECCC
Confidence            999999876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.20  E-value=0.057  Score=43.18  Aligned_cols=42  Identities=17%  Similarity=0.298  Sum_probs=33.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~   62 (280)
                      +|.|.|+ |-+|+.+|..++..|++|.+.+++++.++...+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i   42 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRI   42 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence            4678888 89999999999999999999999988776654443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.20  E-value=0.22  Score=43.73  Aligned_cols=89  Identities=24%  Similarity=0.260  Sum_probs=56.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH--HHH------HHHhCCCCCeEEEecCCCCHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--QQV------CQSLGGEPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~--~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~   84 (280)
                      ..++.||++-|.|- |.||+++|+.+...|++|+..+|.....  ...      .+++-...++..+.|-++.+.  ..+
T Consensus       141 ~~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T--~hL  217 (324)
T COG1052         141 GFDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPET--RHL  217 (324)
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHH--hhh
Confidence            34789999999985 6899999999999999999999876311  110      122222356777778776542  222


Q ss_pred             HHH-HHHHcCCccEEEECCCCC
Q 023613           85 VDL-TVEKFGTLDIMVNNAGIS  105 (280)
Q Consensus        85 ~~~-~~~~~~~~d~li~~ag~~  105 (280)
                      +.. ..++ -+..+++-|.|-.
T Consensus       218 in~~~l~~-mk~ga~lVNtaRG  238 (324)
T COG1052         218 INAEELAK-MKPGAILVNTARG  238 (324)
T ss_pred             cCHHHHHh-CCCCeEEEECCCc
Confidence            221 2222 2566666666543

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=95.20  E-value=0.36  Score=42.88  Aligned_cols=75  Identities=20%  Similarity=0.366  Sum_probs=49.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.+++|.| ++++|...++.+...|++|+++.+++++.....+.+..  .. ++  +-.+.+.+       .+..+++|
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga--~~-~i--~~~~~~~~-------~~~~~~~D  246 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGA--DD-YL--VSSDAAEM-------QEAADSLD  246 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCC--cE-Ee--cCCChHHH-------HHhcCCCc
Confidence            588999996 59999999888888899998888877665555444442  21 11  22232222       12224689


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.+.|.
T Consensus       247 ~vid~~g~  254 (357)
T PLN02514        247 YIIDTVPV  254 (357)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.19  E-value=0.18  Score=43.87  Aligned_cols=111  Identities=17%  Similarity=0.224  Sum_probs=64.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCC----C-CeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGE----P-DTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~----~-~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.+.|.|+ |.+|..++..++..|. .|++++++++.++.....+...    . ... +.. .++.++           .
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~~~-----------~   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDYED-----------I   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCHHH-----------H
Confidence            46899998 8899999999999865 8999999887665433322211    0 111 111 112111           2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ..-|++|.++|....   +  ..+   -.+.+..|+.-...+.+.+.+..   ..+.+++++
T Consensus        69 ~~aDiVii~~~~p~~---~--~~~---r~~~~~~n~~i~~~i~~~i~~~~---~~~~viv~t  119 (307)
T PRK06223         69 AGSDVVVITAGVPRK---P--GMS---RDDLLGINAKIMKDVAEGIKKYA---PDAIVIVVT  119 (307)
T ss_pred             CCCCEEEECCCCCCC---c--CCC---HHHHHHHHHHHHHHHHHHHHHHC---CCeEEEEec
Confidence            488999999987532   1  222   23444555554444444444432   345566665

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.16  E-value=0.13  Score=45.21  Aligned_cols=79  Identities=30%  Similarity=0.404  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+.++||.|+++++|.++++.+...|++|+.+.+++++.+.+ +.+.  .+. +  .+..+.+....+.+..  ..+++|
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~~-v--~~~~~~~~~~~~~~~~--~~~~vd  236 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELG--ADA-F--VDFKKSDDVEAVKELT--GGGGAH  236 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcC--CcE-E--EcCCCccHHHHHHHHh--cCCCCC
Confidence            478999999999999999999999999999999988766544 4443  111 1  2222222222222111  113699


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++++.+
T Consensus       237 ~vl~~~~  243 (341)
T cd08297         237 AVVVTAV  243 (341)
T ss_pred             EEEEcCC
Confidence            9998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.15  E-value=0.15  Score=45.38  Aligned_cols=79  Identities=18%  Similarity=0.201  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   94 (280)
                      .|.++||.|+ +++|...++.+...|+ +|+.+++++++.+.+ +.+..  . .++  |..+. +++.+.+.++..  ++
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga--~-~~i--~~~~~~~~~~~~v~~~~~--~~  257 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGV--T-EFV--NPKDHDKPVQEVIAEMTG--GG  257 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC--c-eEE--cccccchhHHHHHHHHhC--CC
Confidence            5899999985 8999998888888898 699999988776654 34442  2 122  22221 233333333322  37


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|+++.+.|.
T Consensus       258 ~d~vid~~G~  267 (369)
T cd08301         258 VDYSFECTGN  267 (369)
T ss_pred             CCEEEECCCC
Confidence            9999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.14  E-value=0.36  Score=43.64  Aligned_cols=116  Identities=17%  Similarity=0.192  Sum_probs=63.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|+++||. |+++||..+++.+...|+++++ +++++++++.. +.+..  . .   .|..+..+..+.+.++.. ..++
T Consensus       185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~Ga--~-~---v~~~~~~~~~~~v~~~~~-~~g~  255 (393)
T TIGR02819       185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSFGC--E-T---VDLSKDATLPEQIEQILG-EPEV  255 (393)
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHcCC--e-E---EecCCcccHHHHHHHHcC-CCCC
Confidence            58899994 5689999998888888998655 45665554443 33442  2 1   222222222222222211 1369


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccc
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  156 (280)
                      |++|.+.|....  +...+...           ...-..++.++..+  +.+|+++.++..
T Consensus       256 Dvvid~~G~~~~--~~~~~~~~-----------~~~~~~~~~~~~~~--~~~G~i~~~G~~  301 (393)
T TIGR02819       256 DCAVDCVGFEAR--GHGHDGKK-----------EAPATVLNSLMEVT--RVGGAIGIPGLY  301 (393)
T ss_pred             cEEEECCCCccc--cccccccc-----------cchHHHHHHHHHHh--hCCCEEEEeeec
Confidence            999999996421  11111100           02222334445554  446999998754

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.12  E-value=0.12  Score=46.69  Aligned_cols=42  Identities=21%  Similarity=0.260  Sum_probs=35.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~   58 (280)
                      .|.+++|.|+++++|.++++.+...|++++++.++++..+.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            478999999999999999988888899988887777655444

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.12  E-value=0.21  Score=44.67  Aligned_cols=37  Identities=22%  Similarity=0.437  Sum_probs=31.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ   51 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~   51 (280)
                      ..|++++|+|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3478899999987 5999999999999996 58888765

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.10  E-value=0.11  Score=46.15  Aligned_cols=77  Identities=16%  Similarity=0.256  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      .|+++||.|+ +++|...++.+...|++ |+.+++++++.+.+ +.+..  +. ++  |..+.+..    +.+.+..  .
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga--~~-~i--~~~~~~~~----~~i~~~~~~~  244 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGA--TH-TV--NSSGTDPV----EAIRALTGGF  244 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC--ce-EE--cCCCcCHH----HHHHHHhCCC
Confidence            4899999985 99999998888888986 88888888776655 34432  21 22  33332222    2232222  2


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.+.|.
T Consensus       245 g~d~vid~~g~  255 (358)
T TIGR03451       245 GADVVIDAVGR  255 (358)
T ss_pred             CCCEEEECCCC
Confidence            69999998873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.07  E-value=0.13  Score=44.08  Aligned_cols=42  Identities=19%  Similarity=0.315  Sum_probs=35.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~   56 (280)
                      +++||.++|.|-|+-+|+.++..|.++|++|.++......++
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~  196 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLA  196 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            579999999999999999999999999999988744443333

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.07  E-value=0.075  Score=37.43  Aligned_cols=38  Identities=21%  Similarity=0.353  Sum_probs=33.4

Q ss_pred             CCChHHHHHHHHHHHcC---CeEEEE-ecCcchHHHHHHHhC
Q 023613           26 GATGIGESTVRLFHKHG---AKVCIA-DVQDNLGQQVCQSLG   63 (280)
Q Consensus        26 a~~giG~~la~~l~~~g---~~V~~~-~r~~~~~~~~~~~~~   63 (280)
                      |+|.+|.++++.|++.|   .+|.++ .|++++.+++.+...
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            88999999999999999   889855 999999988877654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK14851 hypothetical protein; Provisional

Probab=95.06  E-value=0.19  Score=48.58  Aligned_cols=80  Identities=16%  Similarity=0.233  Sum_probs=51.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc-------------------chHH---HHHHHhCCCCCeEE
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD-------------------NLGQ---QVCQSLGGEPDTFF   70 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~-------------------~~~~---~~~~~~~~~~~~~~   70 (280)
                      ..|++++|+|.| .||+|..++..|+..|.. +.+++.+.                   .+.+   +...+++...++..
T Consensus        39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~  117 (679)
T PRK14851         39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITP  117 (679)
T ss_pred             HHHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEE
Confidence            357899999999 569999999999999965 66766531                   1111   22333444456666


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 023613           71 CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA  102 (280)
Q Consensus        71 ~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~a  102 (280)
                      +...++ .+.+..+++       +.|+||.+.
T Consensus       118 ~~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        118 FPAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             EecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            666665 344444443       567766554

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.05  E-value=0.15  Score=46.39  Aligned_cols=86  Identities=20%  Similarity=0.212  Sum_probs=54.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-------HHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-------QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      .+|.||++.|.|- |.||+.+|+.+...|++|+..++.....       ..+ +++-...++..+.+.+++.  -+.++.
T Consensus       147 ~~L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l-~ell~~sDiVslh~Plt~~--T~~li~  222 (409)
T PRK11790        147 FEVRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSL-EELLAQSDVVSLHVPETPS--TKNMIG  222 (409)
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCcccccCCceecCCH-HHHHhhCCEEEEcCCCChH--HhhccC
Confidence            4689999999997 7999999999999999999998753211       011 2222235677777776643  233332


Q ss_pred             H-HHHHcCCccEEEECCCC
Q 023613           87 L-TVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        87 ~-~~~~~~~~d~li~~ag~  104 (280)
                      . ..+++ +.+.++-|.+-
T Consensus       223 ~~~l~~m-k~ga~lIN~aR  240 (409)
T PRK11790        223 AEELALM-KPGAILINASR  240 (409)
T ss_pred             HHHHhcC-CCCeEEEECCC
Confidence            1 22222 55555556554

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.05  E-value=0.16  Score=44.24  Aligned_cols=78  Identities=21%  Similarity=0.315  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|.+++|.|+++++|.++++.+...|++++++.++++..+.+ ..+.  .+ .++  +..+.+..   .+.+.+..  .+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g--~~-~~~--~~~~~~~~---~~~~~~~~~~~~  210 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLA--AI-ILI--RYPDEEGF---APKVKKLTGEKG  210 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC--Cc-EEE--ecCChhHH---HHHHHHHhCCCC
Confidence            478999999999999999999999999988888887766555 3333  12 122  22222212   22232222  36


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      +|+++++.|
T Consensus       211 ~d~~i~~~~  219 (334)
T PTZ00354        211 VNLVLDCVG  219 (334)
T ss_pred             ceEEEECCc
Confidence            999999875

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.04  E-value=0.23  Score=43.14  Aligned_cols=112  Identities=20%  Similarity=0.250  Sum_probs=70.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.+.|+|+ |++|.+++..|+.++.  .+++.+..++..+-....+...    .....+..| .+.+++           
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------
Confidence            35889999 9999999999987753  6999999866555444444321    111222333 222222           


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .+-|++|-.||....|     ..+.   .+.++.|..-.-.+.+.+..+   ..++.++.++
T Consensus        68 ~~aDiVvitAG~prKp-----GmtR---~DLl~~Na~I~~~i~~~i~~~---~~d~ivlVvt  118 (313)
T COG0039          68 KGADIVVITAGVPRKP-----GMTR---LDLLEKNAKIVKDIAKAIAKY---APDAIVLVVT  118 (313)
T ss_pred             cCCCEEEEeCCCCCCC-----CCCH---HHHHHhhHHHHHHHHHHHHhh---CCCeEEEEec
Confidence            4899999999987642     1333   456677776666666665554   2346666665

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.94  E-value=0.076  Score=45.45  Aligned_cols=43  Identities=14%  Similarity=0.139  Sum_probs=37.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ   57 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~   57 (280)
                      +++||.++|.|-+.-+|+.++..|.++|++|.++.+....+.+
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~  198 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH  198 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence            5889999999999999999999999999999998776554433

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.93  E-value=0.22  Score=44.21  Aligned_cols=80  Identities=18%  Similarity=0.243  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      .|+++||+| ++++|..+++.+...|+ +|+++.++++..+.+ +.+..  .. ++..+-.+..+.   .+.+.+..  .
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~--~~-vi~~~~~~~~~~---~~~i~~~~~~~  248 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGA--DA-TIDIDELPDPQR---RAIVRDITGGR  248 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC--Ce-EEcCcccccHHH---HHHHHHHhCCC
Confidence            688999997 59999999988888899 899888887765544 33331  11 221111111111   12232222  3


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|+++++.|.
T Consensus       249 ~~d~vid~~g~  259 (361)
T cd08231         249 GADVVIEASGH  259 (361)
T ss_pred             CCcEEEECCCC
Confidence            69999999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.91  E-value=0.082  Score=45.27  Aligned_cols=43  Identities=14%  Similarity=0.255  Sum_probs=37.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ   57 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~   57 (280)
                      +++||.++|.|.|.-+|+-++..|.+++++|.++......+.+
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~  197 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAE  197 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHH
Confidence            5899999999999999999999999999999887665544433

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.90  E-value=0.24  Score=43.60  Aligned_cols=75  Identities=28%  Similarity=0.446  Sum_probs=48.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.+++|+|+++++|.++++.....|++|+.+.++ +.. ...+.+..  + ..  .|..+.+...    .+.. .+++|
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~-~~~~~~g~--~-~~--~~~~~~~~~~----~l~~-~~~vd  229 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAI-PLVKSLGA--D-DV--IDYNNEDFEE----ELTE-RGKFD  229 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chH-HHHHHhCC--c-eE--EECCChhHHH----HHHh-cCCCC
Confidence            38999999999999999999888899998887764 222 23333331  1 12  2333332222    2222 25799


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++++.|
T Consensus       230 ~vi~~~g  236 (350)
T cd08248         230 VILDTVG  236 (350)
T ss_pred             EEEECCC
Confidence            9999876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=94.89  E-value=0.12  Score=43.02  Aligned_cols=36  Identities=33%  Similarity=0.527  Sum_probs=31.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEE-Eec
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~-~~r   50 (280)
                      .++++++++|.| .|.+|+.+++.|.+.|++|+. .+.
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            357899999997 799999999999999999984 444

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.87  E-value=0.64  Score=43.11  Aligned_cols=75  Identities=13%  Similarity=0.236  Sum_probs=49.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+.+|.++|.| .||.|+++++.|.+.|+.|.+.+++.....+..+..    .+.+...+- +.+.+           ..
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~----gi~~~~~~~-~~~~~-----------~~   74 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVT----GVADISTAE-ASDQL-----------DS   74 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhc----CcEEEeCCC-chhHh-----------cC
Confidence            46788999999 678999999999999999999998755433222221    222322211 11111           36


Q ss_pred             ccEEEECCCCCC
Q 023613           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 ~d~li~~ag~~~  106 (280)
                      .|.||...|+..
T Consensus        75 ~d~vV~Spgi~~   86 (473)
T PRK00141         75 FSLVVTSPGWRP   86 (473)
T ss_pred             CCEEEeCCCCCC
Confidence            799999999853

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.85  E-value=0.14  Score=44.76  Aligned_cols=75  Identities=17%  Similarity=0.252  Sum_probs=47.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~~d   96 (280)
                      ++++++||++++|...++.....|++|+.+.+++++.+.+.+ +.  .+ .++  |..+.+.    .+.+.+..  .++|
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g--~~-~~i--~~~~~~~----~~~v~~~~~~~~~d  214 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IG--AE-YVL--NSSDPDF----LEDLKELIAKLNAT  214 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC--Cc-EEE--ECCCccH----HHHHHHHhCCCCCc
Confidence            444445999999999988777789999999888876655533 33  22 222  2222222    22232222  3699


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +++.+.|
T Consensus       215 ~vid~~g  221 (324)
T cd08291         215 IFFDAVG  221 (324)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	280
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-57
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		4e-37
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-35
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		5e-35
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		4e-32
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		5e-31
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-30
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		1e-29
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		1e-29
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-29
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		3e-29
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		3e-29
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-29
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		6e-29
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-28
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		4e-28
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-28
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		5e-28
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		5e-28
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-27
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		5e-27
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-26
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-26
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-26
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-26
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		3e-26
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-26
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		4e-26
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		4e-26
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		4e-26
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		7e-26
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-26
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-25
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-25
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-25
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-25
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-25
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-25
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-25
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		3e-25
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		4e-25
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		4e-25
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		9e-25
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		1e-24
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-24
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		1e-24
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		1e-24
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-24
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-24
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-24
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-24
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-24
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		4e-24
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		6e-24
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		7e-24
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		8e-24
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		1e-23
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-23
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		2e-23
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-23
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		2e-23
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-23
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		4e-23
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-23
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		4e-23
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		5e-23
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-23
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		7e-23
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		7e-23
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		9e-23
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-22
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-22
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-22
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-22
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-22
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-22
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-22
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		3e-22
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-22
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		4e-22
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		6e-22
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		6e-22
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		6e-22
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		1e-21
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-21
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-21
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		4e-21
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-21
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		5e-21
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		6e-21
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		7e-21
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		8e-21
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-20
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		2e-20
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-20
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		2e-20
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-20
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		2e-20
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-20
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		3e-20
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-20
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		6e-20
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		9e-20
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-19
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		1e-19
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-19
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-19
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-19
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-19
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-19
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		4e-19
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		4e-19
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		5e-19
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-19
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		7e-19
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		1e-18
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		1e-18
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		1e-18
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		1e-18
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		2e-18
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		2e-18
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		2e-18
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		2e-18
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		3e-18
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		4e-18
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		4e-18
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-18
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		4e-18
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		4e-18
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		4e-18
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		5e-18
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		5e-18
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		6e-18
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		7e-18
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		9e-18
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		9e-18
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-17
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-17
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-17
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		3e-17
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		3e-17
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-17
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-17
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		5e-17
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		5e-17
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		5e-17
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		7e-17
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		7e-17
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		7e-17
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		7e-17
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		8e-17
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		1e-16
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		1e-16
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-16
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-16
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		1e-16
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-16
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		3e-16
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-16
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		3e-16
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		3e-16
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		4e-16
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		1e-15
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		1e-15
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		1e-15
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-15
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-15
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		2e-15
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		2e-15
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-15
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		2e-15
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		3e-15
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-15
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		3e-15
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		4e-15
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		6e-15
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		7e-15
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		1e-14
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		1e-14
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		1e-14
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		1e-14
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-14
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		3e-14
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-14
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		4e-14
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		5e-14
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-14
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		8e-14
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		8e-14
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-13
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		1e-13
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-13
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		2e-13
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-13
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-13
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-13
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-13
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		2e-13
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		3e-13
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-13
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		3e-13
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		4e-13
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		4e-13
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		5e-13
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		5e-13
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		6e-13
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		6e-13
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		6e-13
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		7e-13
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		1e-12
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		1e-12
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-12
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-12
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		1e-12
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-12
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-12
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-12
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-12
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		3e-12
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		3e-12
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		3e-12
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		3e-12
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		7e-12
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		7e-12
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		1e-11
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		1e-11
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		1e-11
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		2e-11
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		2e-11
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-10
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		8e-10
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		1e-09
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		1e-09
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-09
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		2e-09
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		4e-09
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		6e-09
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-09
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		5e-08
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		6e-08
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		6e-08
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		1e-07
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		2e-07
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-07
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		2e-07
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		3e-07
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		5e-07
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		6e-07
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		7e-07
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		9e-07
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		1e-06
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		2e-06
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-06
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-06
2ptg_A	319	Crystal Structure Of Eimeria Tenella Enoyl Reductas		9e-06
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		2e-05
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		3e-05
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		3e-05
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		3e-05
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		3e-05
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-05
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		5e-05
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		6e-05
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		6e-05
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		9e-05
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		9e-05
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		1e-04
2o2s_A	315	The Structure Of T. Gondii Enoyl Acyl Carrier Prote		1e-04
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		1e-04
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		1e-04
1cwu_A	296	Brassica Napus Enoyl Acp Reductase A138g Mutant Com		2e-04
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		2e-04
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		2e-04
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		2e-04
1d7o_A	297	Crystal Structure Of Brassica Napus Enoyl Acyl Carr		2e-04
1eno_A	312	Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLE		2e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		3e-04
2o50_A	315	The Crystal Structure Of Toxoplasma Gondii Enoyl Ac		3e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		3e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		3e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		3e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		3e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		3e-04
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		3e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		3e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		3e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		4e-04
3k2e_A	296	Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) R		5e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		5e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		5e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		5e-04
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		6e-04
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		6e-04
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		6e-04
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		6e-04
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		7e-04
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		7e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  219 bits (557), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/275 (48%), Positives = 178/275 (64%), Gaps = 11/275 (4%)
Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M ++++ DSS    RL  +VA+ITGGA GIGE+T +LF ++GAKV IAD+ D+ GQ+VC 
Sbjct: 1   MGSTSTPDSS--TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN 58
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           ++G      F HCDVTK+EDV + VD T+ K G LDIM  N G+       I EA   +F
Sbjct: 59  NIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF 118
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHAYTGSKHAVLGLN 179
           ++V DINV G F   KHAAR+MIP  KG+I+   S++    G G  H YT +KHAVLGL 
Sbjct: 119 KRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLT 178
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHL-PEEERTEDAMVGFRNFVARNANMQGTEL 238
            ++  ELG+YGIRVNCVSPY VA+ L       +  R E+          + AN++GT L
Sbjct: 179 TSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEE-------LAHQAANLKGTLL 231
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            A DVA+AV +LA DE++Y+SG NL++DGG+T  N
Sbjct: 232 RAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTN 266

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  151 bits (381), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 139/254 (54%), Gaps = 20/254 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL++GGA G+G S VR     GAKV   D+ D  G+ +   L       + H D
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL--ADAARYVHLD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+     +AVD  V  FG L ++VNNAGI       I +  L+E++++ D+N+ GVF G
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++   + M    +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRVN
Sbjct: 120 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  V T +    +PE+         F+  + R A          +V+N V++LASDE
Sbjct: 180 SIHPGLVKTPMT-DWVPEDI--------FQTALGRAAE-------PVEVSNLVVYLASDE 223
Query: 255 ARYISGTNLMVDGG 268
           + Y +G   +VDGG
Sbjct: 224 SSYSTGAEFVVDGG 237

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 135/254 (53%), Gaps = 20/254 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL++GGA G G S VR     GAKV   D+ D  G+     L       + H D
Sbjct: 4   RLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAEL--ADAARYVHLD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+     +AVD  V  FG L ++VNNAGI       I +  L+E++++ D+N+ GVF G
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLG 119
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++   +      +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRVN
Sbjct: 120 IRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  V T       P  +   + +  F+  + R A          +V+N V++LASDE
Sbjct: 180 SIHPGLVKT-------PXTDWVPEDI--FQTALGRAAE-------PVEVSNLVVYLASDE 223
Query: 255 ARYISGTNLMVDGG 268
           + Y +G   +VDGG
Sbjct: 224 SSYSTGAEFVVDGG 237

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  144 bits (364), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 140/266 (52%), Gaps = 9/266 (3%)
Query: 7   TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGE 65
           T +S    R   RV LITGG +G+G +T       GAK+ + DV  + L       L   
Sbjct: 2   TATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA 61
Query: 66  PDT--FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
           PD        DV+ E  V + V  T E+FG +D   NNAGI G   P       +EF+KV
Sbjct: 62  PDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP-TESFTAAEFDKV 120
Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNV 182
             IN++GVF G++   +IM  Q  G +++  SV G I G+G  + Y  +KH V+GL +N 
Sbjct: 121 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG-IRGIGNQSGYAAAKHGVVGLTRNS 179
Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           A E G+YGIR+N ++P A+ T +    + + +  E+       F+  N + +  E  A +
Sbjct: 180 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLD-PENPRKAAEEFIQVNPSKRYGE--APE 236
Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           +A  V FL SD+A Y++ T + +DGG
Sbjct: 237 IAAVVAFLLSDDASYVNATVVPIDGG 262

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 9/258 (3%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH 72
           Q L  +V ++TG  +GIG +  + F  + + V   ++ ++   Q+ Q L G   +     
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+K++DV   V  T E +  +D++ NNAGI     P + E     +E+V  +N+   F
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTP-VAEVSDELWERVLAVNLYSAF 121
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +  +    IM+ Q KG I++  S+AG  GG     YT +KH ++GL +++AA  G  GIR
Sbjct: 122 YSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIR 181
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
              V P  V T + L      E     +    +  +R A  +       D+AN ++FLAS
Sbjct: 182 AVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPE-------DIANVIVFLAS 234
Query: 253 DEARYISGTNLMVDGGFT 270
           DEA +++G  ++VDGG T
Sbjct: 235 DEASFVNGDAVVVDGGLT 252

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 137/258 (53%), Gaps = 14/258 (5%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDTFF-CHCDVT 76
           RVA++TG ++G G +    F   G +V   D+  + L +          D       DV 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGM 135
            E DV +A+  T+E+FG +D++VNNAGI+G +    +    + +F+KV  +NV+G+F G 
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M+ Q  G I++I SVA  +   G  AYT SK AVL L K+VA +    GIR N 
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V P  + T +    L + E  +  +          A +   E+ TA  VA+AV+FLA ++
Sbjct: 183 VCPGMIETPMTQWRLDQPELRDQVL----------ARIPQKEIGTAAQVADAVMFLAGED 232
Query: 255 ARYISGTNLMVDGGFTSV 272
           A Y++G  L++DG +T++
Sbjct: 233 ATYVNGAALVMDGAYTAI 250

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 127/256 (49%), Gaps = 15/256 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+VAL+TG + GIG +      K GA V +  A  +    + V +      D      
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV   EDV + V  TV+ FG +DI+VNNAG++      +      E++ V + N+KGVF 
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNL--LMRMKEEEWDTVINTNLKGVFL 119
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K  +R M+ Q  G I++I SV G  G  G   Y  +K  V+GL K  A EL    I V
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P  +AT +    L E  + E         +      Q  E  A D+ANAV F ASD
Sbjct: 180 NAIAPGFIATDMTDV-LDENIKAE--------MLKLIPAAQFGE--AQDIANAVTFFASD 228
Query: 254 EARYISGTNLMVDGGF 269
           +++YI+G  L VDGG 
Sbjct: 229 QSKYITGQTLNVDGGM 244

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 128/255 (50%), Gaps = 15/255 (5%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL+TGGA+G+G   V+L    GAKV  +D+ +  GQQ+   LG    + F   D
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--ERSMFVRHD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKGVFH 133
           V+ E D    +     + GTL+++VNNAGI     P D+    L +F ++  IN + VF 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGI---LLPGDMETGRLEDFSRLLKINTESVFI 117
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGI 191
           G +     M  +T G+II++ SV+  +       Y+ SK AV  L +  A    K  Y I
Sbjct: 118 GCQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN + P  + T +  A LP+    E  +   +       N  G       +A  VLFLA
Sbjct: 177 RVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPK------LNRAGRAYMPERIAQLVLFLA 230
Query: 252 SDEARYISGTNLMVD 266
           SDE+  +SG+ L  D
Sbjct: 231 SDESSVMSGSELHAD 245

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 128/257 (49%), Gaps = 16/257 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+  +ITGGA G+G    R     GA+V +ADV D  G    + LG      + H DV
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDV 60
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T EED    V    E+FG++D +VNNAGIS      +    +  F KV +IN+ GVF GM
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF--LETESVERFRKVVEINLTGVFIGM 118
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K     M     G+I++I S AG +G     +Y  SK  V GL+K  A ELG   IRVN 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNF-VARNANMQGTELTANDVANAVLFLASDE 254
           V P     G+    +  E         + N  + R  N  G      ++A AV+ L SD 
Sbjct: 179 VHP-----GMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPG------EIAGAVVKLLSDT 227
Query: 255 ARYISGTNLMVDGGFTS 271
           + Y++G  L VDGG+T+
Sbjct: 228 SSYVTGAELAVDGGWTT 244

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 127/262 (48%), Gaps = 21/262 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR A++TGG+ GIG +  R   K GA V IAD+     Q V   L  E   F    DV
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL--ENGGFAVEVDV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHG 134
           TK   V +A+   ++  G  D++  NAG+S   P  DI +    E++  FD+N +GVF  
Sbjct: 68  TKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITD---EEWDFNFDVNARGVFLA 124
Query: 135 MKHAAR-IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            + A R  +   TKG I++  S+A  +G      Y+ SK AV G  + +A E+    IRV
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRV 184
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT-------ANDVANA 246
           NCV P  V T +       +ER        R         +   LT         DVA+ 
Sbjct: 185 NCVCPGFVKTAM-------QEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADV 237
Query: 247 VLFLASDEARYISGTNLMVDGG 268
           V+FLASD AR+++G  + V GG
Sbjct: 238 VVFLASDAARFMTGQGINVTGG 259

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 126/257 (49%), Gaps = 17/257 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+  +ITGGA G+G    R     GA+V +ADV D  G    + LG      + H DV
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDV 60
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T EED    V    E+FG++D +VNNAGIS      +    +  F KV +IN+ GVF GM
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF--LETESVERFRKVVEINLTGVFIGM 118
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K     M     G+I++I S AG +G     +Y  SK  V GL+K  A ELG   IRVN 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-QGTELTANDVANAVLFLASDE 254
           V P        + + P    T     G R       N   G      ++A AV+ L SD 
Sbjct: 179 VHP-------GMTYTPMTAET-----GIRQGEGNYPNTPMGRVGEPGEIAGAVVKLLSDT 226
Query: 255 ARYISGTNLMVDGGFTS 271
           + Y++G  L VDGG+T+
Sbjct: 227 SSYVTGAELAVDGGWTT 243

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 141/262 (53%), Gaps = 19/262 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD--TFFCH 72
           RL G+VA+ITGG  GIG +    F + GAKV I D   ++G++  +S+ G PD   FF H
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSV-GTPDQIQFFQH 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D + E+      D T + FG +  +VNNAGI  A    + E   +E+ K+  +N+ GVF
Sbjct: 62  -DSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 133 HGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE--LGKY 189
            G +   + M  +  G +II++ S+ G +G     AY  SK AV  ++K+ A +  L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            +RVN V P  + T L +  LP     E+AM        R     G     ND+A   ++
Sbjct: 179 DVRVNTVHPGYIKTPL-VDDLP---GAEEAM------SQRTKTPMGHIGEPNDIAYICVY 228
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LAS+E+++ +G+  +VDGG+T+
Sbjct: 229 LASNESKFATGSEFVVDGGYTA 250

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 135/264 (51%), Gaps = 19/264 (7%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           RV ++TGG +GIG +T  LF K+GA V +ADV ++   +V   +G +   F    DV+  
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKA--FGVRVDVSSA 85
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           +D  S V+ T  K+G +D++VNNAG       ++       ++++  +NVKG+F   K+ 
Sbjct: 86  KDAESXVEKTTAKWGRVDVLVNNAGF--GTTGNVVTIPEETWDRIXSVNVKGIFLCSKYV 143
Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
             +      G+II+  S           AY  SK A+  L +  A +  K GIRVN V+P
Sbjct: 144 IPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAP 203
Query: 199 YAVATG-----LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             + +       A A  P + R++        F AR    +    TA ++A A LFLASD
Sbjct: 204 GTIDSPYFTKIFAEAKDPAKLRSD--------FNARAVXDRXG--TAEEIAEAXLFLASD 253
Query: 254 EARYISGTNLMVDGGFTSVNHSLR 277
            +R+ +G+ L VDGG +  NH ++
Sbjct: 254 RSRFATGSILTVDGGSSIGNHLVK 277

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 21/256 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           + AL+TG + GIG S      + G  V +  A  ++     V +      D+F    +V 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVFNCIQ 128
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
            A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V
Sbjct: 129 KATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 188
Query: 197 SPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           +P  + + +  A    L E+  T+  +  F           G +    D+AN V FLASD
Sbjct: 189 APGFIVSDMTDALSDELKEQMLTQIPLARF-----------GQD---TDIANTVAFLASD 234
Query: 254 EARYISGTNLMVDGGF 269
           +A+YI+G  + V+GG 
Sbjct: 235 KAKYITGQTIHVNGGM 250

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 140/262 (53%), Gaps = 19/262 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD--TFFCH 72
           RL G+VA+ITGG  GIG +    F + GAKV I     ++G++  +S+ G PD   FF H
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV-GTPDQIQFFQH 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D + E+      D T + FG +  +VNNAGI  A    + E   +E+ K+  +N+ GVF
Sbjct: 62  -DSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 133 HGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE--LGKY 189
            G +   + M  +  G +II++ S+ G +G     AY  SK AV  ++K+ A +  L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            +RVN V P  + T L +  LP     E+AM        R     G     ND+A   ++
Sbjct: 179 DVRVNTVHPGYIKTPL-VDDLP---GAEEAM------SQRTKTPMGHIGEPNDIAYICVY 228
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LAS+E+++ +G+  +VDGG+T+
Sbjct: 229 LASNESKFATGSEFVVDGGYTA 250

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  121 bits (304), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 137/257 (53%), Gaps = 18/257 (7%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+  L+TGGA GIG +  + F + GA V + D++   G++V +++GG     F   D+  
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA----FFQVDLED 60
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E +    V+      G +D++VNNA I+ AP   +    L E+ +V ++N+    H    
Sbjct: 61  ERERVRFVEEAAYALGRVDVLVNNAAIA-APGSAL-TVRLPEWRRVLEVNLTAPMHLSAL 118
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           AAR M     G I+++ SV G        AY  SK  ++ L +++A +L    IRVN V+
Sbjct: 119 AAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 178
Query: 198 PYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           P A+AT     A+A  P+ ERT       R++   +A  +  +    +VA AVLFLAS++
Sbjct: 179 PGAIATEAVLEAIALSPDPERTR------RDWEDLHALRRLGK--PEEVAEAVLFLASEK 230
Query: 255 ARYISGTNLMVDGGFTS 271
           A +I+G  L VDGG T+
Sbjct: 231 ASFITGAILPVDGGMTA 247

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 138/259 (53%), Gaps = 23/259 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH-C 73
           L G+ +LITG ++GIG +  RL HK G+KV I+       ++  +SLG    D +    C
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN----EEKLKSLGNALKDNYTIEVC 67
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           ++  +E+ CS +   + K   LDI+V NAGI+      IR  D  +F+KV DIN+K  F 
Sbjct: 68  NLANKEE-CSNL---ISKTSNLDILVCNAGITSDTLA-IRMKD-QDFDKVIDINLKANFI 121
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A + MI +  G II+I S+ G  G  G   Y  SK  ++G+ K+++ E+   GI V
Sbjct: 122 LNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITV 181
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  + + +    L E++R  +A+V             GT     DVA AV FLAS+
Sbjct: 182 NAVAPGFIKSDMT-DKLNEKQR--EAIVQKIPL--------GTYGIPEDVAYAVAFLASN 230
Query: 254 EARYISGTNLMVDGGFTSV 272
            A YI+G  L V+GG   V
Sbjct: 231 NASYITGQTLHVNGGMLMV 249

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 21/255 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           + AL+TG + GIG S      + G  V +  A  ++     V +      D+F    +V 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++V + +   V +FG+LD++VNNAGI+      +      E++ V D N+KGVF+ ++
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGITRDNL--LXRXKEQEWDDVIDTNLKGVFNCIQ 122
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
            A    + Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL   GI VN V
Sbjct: 123 KATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAV 182
Query: 197 SPYAVATGLALA---HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           +P  + +    A    L E+  T+  +  F          Q T     D+AN V FLASD
Sbjct: 183 APGFIVSDXTDALSDELKEQXLTQIPLARF---------GQDT-----DIANTVAFLASD 228
Query: 254 EARYISGTNLMVDGG 268
           +A+YI+G  + V+GG
Sbjct: 229 KAKYITGQTIHVNGG 243

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 21/268 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFF 70
           ++  G+V L+TG    IG +T     + G  + + D+     ++   S+   G E  ++ 
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
           C  DVT EE V   VD  V  FG +D + NNAG  GA  P +++    +F +V  INV G
Sbjct: 63  C--DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDDFARVLTINVTG 119
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            FH +K  +R MI Q  G I++  S+AG  G     AY  SK A++ L +  A +L  Y 
Sbjct: 120 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA---------- 240
           IRVN +SP  +  G     + E +    A VG + F + +  +   ++            
Sbjct: 180 IRVNAISPGYMGPGF----MWERQVELQAKVGSQYF-STDPKVVAQQMIGSVPMRRYGDI 234
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
           N++   V FL  D++ +++G NL + GG
Sbjct: 235 NEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 130/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNAGI+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P A+ T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGAIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 20/258 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFC 71
           RL G+ A+ITG   GIG+     F   GA V ++D+  +    V    Q LGG+   F C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFAC 65
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CD+T E+++ +  D  + K G +DI+VNNAG  G P P   +  +++F + +++NV   
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAG-GGGPKP--FDMPMADFRRAYELNVFSF 122
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FH  +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  I
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182
Query: 192 RVNCVSPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           RVN ++P A+ T  L     PE E+        R                 D+ANA LFL
Sbjct: 183 RVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG-----------QPQDIANAALFL 231
Query: 251 ASDEARYISGTNLMVDGG 268
            S  A ++SG  L V GG
Sbjct: 232 CSPAASWVSGQILTVSGG 249

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G++AL+TG + GIG +        GAKV      +N  Q +   LG          +VT 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTD 62
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKA 120
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
             R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN V+
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  + T +  A L +++R      G    V       G    A ++ANAV FLASDEA Y
Sbjct: 181 PGFIETDMTRA-LSDDQRA-----GILAQVP-----AGRLGGAQEIANAVAFLASDEAAY 229
Query: 258 ISGTNLMVDGGFTSV 272
           I+G  L V+GG   V
Sbjct: 230 ITGETLHVNGGMYMV 244

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 19/257 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L  R+AL+TG + GIG +        GAKV +  A       + V        + F    
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV++E +V +     +E++G LD++VNNAGI+        + D  +++ V D+N+ GVF 
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRD--DWQSVLDLNLGGVFL 143
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + AA+IM+ Q  G II+I SV G +G  G   Y+ +K  V+GL K VA EL   GI V
Sbjct: 144 CSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITV 203
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  +AT +  + L  E+  E   +G                 A +VA  V FLA+D
Sbjct: 204 NAVAPGFIATDMT-SELAAEKLLEVIPLGRYG-------------EAAEVAGVVRFLAAD 249
Query: 254 -EARYISGTNLMVDGGF 269
             A YI+G  + +DGG 
Sbjct: 250 PAAAYITGQVINIDGGL 266

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 129/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNAGI+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGFIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 15/257 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR AL+TG   G+GE+  R  H  GA V +   ++   +++   LG     F    ++
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG--ERIFVFPANL 62
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  E V +      E+ G +DI+VNNAGI+      +R +D  +++ V  +N+  VF+  
Sbjct: 63  SDREAVKALGQKAEEEMGGVDILVNNAGIT-RDGLFVRMSD-EDWDAVLTVNLTSVFNLT 120
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M+ +  G II+I S+ G  G  G   Y  SK  ++G +K++A E+    + VNC
Sbjct: 121 RELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNC 180
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  + + +    L E+++  DA++G       N  M+   + A D+A AV++LASDEA
Sbjct: 181 IAPGFIESAMT-GKLNEKQK--DAIMG-------NIPMKRMGVGA-DIAAAVVYLASDEA 229
Query: 256 RYISGTNLMVDGGFTSV 272
            Y++G  L V+GG   +
Sbjct: 230 AYVTGQTLHVNGGMAMI 246

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 15/257 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR AL+TG   G+GE+  R  H  GA V +   ++   +++   LG     F    ++
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELG--ERIFVFPANL 65
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  E V +      E+ G +DI+VNNAGI+      +R +D  +++ V  +N+  VF+  
Sbjct: 66  SDREAVKALGQKAEEEMGGVDILVNNAGIT-RDGLFVRMSD-EDWDAVLTVNLTSVFNLT 123
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M+ +  G II+I S+ G  G  G   Y  SK  ++G +K++A E+    + VNC
Sbjct: 124 RELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNC 183
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  + + +    L E+++  DA++G       N  M+   + A D+A AV++LASDEA
Sbjct: 184 IAPGFIESAMT-GKLNEKQK--DAIMG-------NIPMKRMGVGA-DIAAAVVYLASDEA 232
Query: 256 RYISGTNLMVDGGFTSV 272
            Y++G  L V+GG   +
Sbjct: 233 AYVTGQTLHVNGGMAMI 249

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L  +V ++TG + GIG +    F   G+KV    + D           GE       CDV
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP----------GEAKYDHIECDV 55
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  + V +++D   +++G++ ++VNNAGI       I    + E+ ++ D+N+ G ++  
Sbjct: 56  TNPDQVKASIDHIFKEYGSISVLVNNAGIES--YGKIESMSMGEWRRIIDVNLFGYYYAS 113
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K A   MI     +I++I SV  +I      AY  SKHAV+GL K++A +     +R N 
Sbjct: 114 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNA 172
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL------TANDVANAVLF 249
           V P  + T L +    E E   D M      + +  +  G E          +VA+AV F
Sbjct: 173 VCPATIDTPL-VRKAAELEVGSDPM-----RIEKKISEWGHEHPMQRIGKPQEVASAVAF 226
Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS EA +I+GT L VDGG +
Sbjct: 227 LASREASFITGTCLYVDGGLS 247

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L  +V ++TG + GIG +    F   G+KV    + D           GE       CDV
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP----------GEAKYDHIECDV 62
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  + V +++D   +++G++ ++VNNAGI       I    + E+ ++ D+N+ G ++  
Sbjct: 63  TNPDQVKASIDHIFKEYGSISVLVNNAGIES--YGKIESMSMGEWRRIIDVNLFGYYYAS 120
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K A   MI     +I++I SV  +I      AY  SKHAV+GL K++A +     +R N 
Sbjct: 121 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNA 179
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL------TANDVANAVLF 249
           V P  + T L +    E E   D M      + +  +  G E          +VA+AV F
Sbjct: 180 VCPATIDTPL-VRKAAELEVGSDPM-----RIEKKISEWGHEHPMQRIGKPQEVASAVAF 233
Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS EA +I+GT L VDGG +
Sbjct: 234 LASREASFITGTCLYVDGGLS 254

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G++AL+TG + GIG +        GAKV      +N  Q +   LG          +VT 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTD 62
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKA 120
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
             R M+ +  G II+I SV G +G  G   +  +K  ++G +K++A E+   GI VN V+
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  + T +  A L +++R      G    V       G    A ++ANAV FLASDEA Y
Sbjct: 181 PGFIETDMTRA-LSDDQRA-----GILAQVP-----AGRLGGAQEIANAVAFLASDEAAY 229
Query: 258 ISGTNLMVDGGFTSV 272
           I+G  L V+GG   V
Sbjct: 230 ITGETLHVNGGMYMV 244

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 18/261 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFC 71
           L GRVAL+TGG+ G+G    +   + G  V +A    +      Q++ +  G E   F  
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF-- 76
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CDV+  E+V   ++   EKFG LD +VN AGI+     +  E  L EF +V ++N+ G 
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAE--EFPLDEFRQVIEVNLFGT 134
Query: 132 FHGMKHAARIMIPQTKGTIISICSVA-GAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           ++  + A  ++      +II+I S+    +      AY  SK  V  L K +A E G+YG
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN ++P    T +  A   + E+         +++ +   + G      D+    +FL
Sbjct: 195 IRVNVIAPGWYRTKMTEAVFSDPEKL--------DYMLKRIPL-GRTGVPEDLKGVAVFL 245
Query: 251 ASDEARYISGTNLMVDGGFTS 271
           AS+EA+Y++G  + VDGG+T+
Sbjct: 246 ASEEAKYVTGQIIFVDGGWTA 266

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 133/261 (50%), Gaps = 17/261 (6%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           RL  RVA++TGGA  IG + V    + GA+V IAD+ + +  +  + L  E  D      
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS--EFEKVFDINVKGV 131
           DVT  E V +AV    E+ G +DI+V  AGI      +++  D++  ++ K  DIN+ G+
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGIC---ISEVKAEDMTDGQWLKQVDINLNGM 126
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKY 189
           F   +   RIM+ Q +G I++I S++G I        AY  SK  V    +++AAE   +
Sbjct: 127 FRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPH 186
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIR N V+P  + T L    + + E  +  + G            G     ++VA+ V F
Sbjct: 187 GIRANAVAPTYIETTLTRFGMEKPELYDAWIAG---------TPMGRVGQPDEVASVVQF 237
Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD A  ++G  + VD GFT
Sbjct: 238 LASDAASLMTGAIVNVDAGFT 258

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNAGI+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   +  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGFIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNA I+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNAAITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGFIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 17/255 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM--ALNV 67
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNA I+      +      E+  + + N+  +F   
Sbjct: 68  TNPESIEAVLKAITDEFGGVDILVNNADITRDNL--LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T +  A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 186 VAPGFIETDMTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 233
Query: 255 ARYISGTNLMVDGGF 269
           A YI+G  L V+GG 
Sbjct: 234 AAYITGETLHVNGGM 248

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----GQQVCQSLGGEPDTFFC 71
           L  +V +ITGG+TG+G +    F +  AKV I    +       ++  +  GG+      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQ--AIIV 70
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVTKEEDV + V   +++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G 
Sbjct: 71  QGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGA 128
Query: 132 FHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A E    G
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 191 IRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           IRVN + P A+ T +       P +    ++M+    ++ +            +VA    
Sbjct: 189 IRVNNIGPGAMNTPINAEKFADPVQRADVESMIPM-GYIGK----------PEEVAAVAA 237
Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FLAS +A Y++G  L  DGG T 
Sbjct: 238 FLASSQASYVTGITLFADGGMTK 260

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----GQQVCQSLGGEPDTFFC 71
           L  +V +ITGG+TG+G +    F +  AKV I    +       ++  +  GG+      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQ--AIIV 70
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVTKEEDV + V   +++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G 
Sbjct: 71  QGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGA 128
Query: 132 FHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A E    G
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 191 IRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           IRVN + P A+ T +       P +    ++M+    ++ +            +VA    
Sbjct: 189 IRVNNIGPGAMNTPINAEKFADPVQRADVESMIPM-GYIGK----------PEEVAAVAA 237
Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FLAS +A Y++G  L  DGG T 
Sbjct: 238 FLASSQASYVTGITLFADGGMTK 260

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----GQQVCQSLGGEPDTFFC 71
           L  +V +ITGG+TG+G +    F +  AKV I    +       ++  +  GG+      
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQ--AIIV 70
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DVTKEEDV + V   +++FGTLD+M+NNAG+   P P   E  L  + KV D N+ G 
Sbjct: 71  QGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVEN-PVPS-HELSLDNWNKVIDTNLTGA 128
Query: 132 FHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           F G + A +  +    KG +I++ SV   I       Y  SK  +  + + +A E    G
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 191 IRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           IRVN + P A+ T +       P +    ++M+    ++ +            +VA    
Sbjct: 189 IRVNNIGPGAMNTPINAEKFADPVQRADVESMIPM-GYIGK----------PEEVAAVAA 237
Query: 249 FLASDEARYISGTNLMVDGGFTS 271
           FLAS +A Y++G  L  DGG T 
Sbjct: 238 FLASSQASYVTGITLFADGGMTK 260

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 18/259 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCD 74
           L G+ ALITG +TGIG+     + + GA+V +A    +  Q V   + G         CD
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+ + V   +D    + G +DI V NAGI       + +  L EF+++ D NV GVF  
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA--MLDMPLEEFQRIQDTNVTGVFLT 147
Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELGKYGI 191
            + AAR M+ Q   GTII+  S++G I  +      Y  SK AV+ L K +A EL  + I
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN VSP  + T L        E   D    +   +      +  ELT        L+LA
Sbjct: 208 RVNSVSPGYIRTELV-------EPLADYHALWEPKIPLGRMGRPEELT-----GLYLYLA 255
Query: 252 SDEARYISGTNLMVDGGFT 270
           S  + Y++G+++++DGG+T
Sbjct: 256 SAASSYMTGSDIVIDGGYT 274

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 127/265 (47%), Gaps = 31/265 (11%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF----- 69
           +L G+ A++TG + G+G++        GA + +       G     SL    + F     
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLN------GSPASTSLDATAEEFKAAGI 55
Query: 70  ---FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVF 124
                  DV   EDV + V   ++ FG +DI+VNNAGI+     D     +SE  ++ V 
Sbjct: 56  NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT----RDTLMLKMSEKDWDDVL 111
Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           + N+K  +   K  ++IM+ Q  G II+I S+AG IG  G   Y  SK  ++G  K++A 
Sbjct: 112 NTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK 171
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E    GI  N V+P  + T +    LP++ +     +   N   +         T  +VA
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDMT-DVLPDKVKE----MYLNNIPLKRFG------TPEEVA 220
Query: 245 NAVLFLASDEARYISGTNLMVDGGF 269
           N V FLASD++ YI+G  + +DGG 
Sbjct: 221 NVVGFLASDDSNYITGQVINIDGGL 245

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +     + + N   +  + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DVT E DV + V   +++FG LD+M+NNAG+   P     E  LS++ KV D N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSS-HEMSLSDWNKVIDTNLT 118
Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + K +A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAP 178
Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       PE+    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----------GYIGEPEEIAAV 227
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 133/256 (51%), Gaps = 22/256 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           V ++TG + GIG++      K G KV +     A   + + +Q+ ++ GG+  TF    D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI-EAYGGQAITF--GGD 59
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+KE DV + +   ++ +GT+D++VNNAGI+      +     S++++V D+N+ GVF  
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLC 117
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A E     I VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SD 253
            V P  +A+ +  A L E+   E  ++G            G      +VA  V FLA S 
Sbjct: 178 VVCPGFIASDMT-AKLGED--MEKKILGTIPL--------GRTGQPENVAGLVEFLALSP 226
Query: 254 EARYISGTNLMVDGGF 269
            A YI+G    +DGG 
Sbjct: 227 AASYITGQAFTIDGGI 242

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 12/265 (4%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD--VQDNLGQQVCQSLGGEPDTFFC 71
           Q    + A+ITG  +GIG +  R   K GA + +      D +     +  G    T   
Sbjct: 21  QSXXTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80
Query: 72  H-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
           H  D TK  ++        ++FG  DI+VNNAG+       I +  + +++++  +N+  
Sbjct: 81  HPADXTKPSEIADXXAXVADRFGGADILVNNAGVQF--VEKIEDFPVEQWDRIIAVNLSS 138
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            FH ++ A      +  G II+I S  G +      AY  +KH + GL K VA E+ + G
Sbjct: 139 SFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESG 198
Query: 191 IRVNCVSPYAVATGLALAHLPEEER----TEDAMVGFRNFVARNANMQGTELTANDVANA 246
           + VN + P  V T L    +P++ R    TE+ ++   N V          +T   VA+ 
Sbjct: 199 VTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVI---NEVXLKGQPTKKFITVEQVASL 255
Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
            L+LA D+A  I+GT++  DGG+T+
Sbjct: 256 ALYLAGDDAAQITGTHVSXDGGWTA 280

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 128/264 (48%), Gaps = 22/264 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +     + + N   +  + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DVT E DV + V   +++FG LD+M+NNAG++  P     E  LS++ KV D N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLAN-PVSS-HEMSLSDWNKVIDTNLT 118
Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       PE+    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----------GYIGEPEEIAAV 227
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +     + + N   +  + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DVT E DV + V   +++FG LD+M+NNAG+   P     E  LS++ KV D N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSS-HEMSLSDWNKVIDTNLT 118
Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       PE+    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----------GYIGEPEEIAAV 227
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +     + + N   +  + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               DVT E DV + V   +++FG LD+M+NNAG+   P     E  LS++ KV D N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSS-HEMSLSDWNKVIDTNLT 118
Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 189 YGIRVNCVSPYAVATGLALAHL--PEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            GIRVN + P A+ T +       PE+    ++M+             G      ++A  
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM-----------GYIGEPEEIAAV 227
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
             +LAS EA Y++G  L  DGG T
Sbjct: 228 AAWLASSEASYVTGITLFADGGMT 251

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 22/260 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VA++TG   GIG +  R     G  V  AD+  +        +G       C  DV
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG--CGAAACRVDV 84
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + E+ + + VD  V  FG +D +V NAG+       + +  + +F++V  IN++G +   
Sbjct: 85  SDEQQIIAMVDACVAAFGGVDKLVANAGV--VHLASLIDTTVEDFDRVIAINLRGAWLCT 142
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           KHAA  MI +  G I+++ S+AG +   G  AY  SK  ++ L++  AAEL   GIR N 
Sbjct: 143 KHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNT 202
Query: 196 VSPYAVATGLALAHLPEEERTEDAMV-------GFRNFVARNANMQGTELTANDVANAVL 248
           + P  V T +        ++T  AM        G R+ +AR   +QG      ++A  V+
Sbjct: 203 LLPAFVDTPM--------QQTAMAMFDGALGAGGARSMIAR---LQGRMAAPEEMAGIVV 251
Query: 249 FLASDEARYISGTNLMVDGG 268
           FL SD+A  I+GT  + DGG
Sbjct: 252 FLLSDDASMITGTTQIADGG 271

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 121/238 (50%), Gaps = 19/238 (7%)
Query: 35  VRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT 94
           VR F   GA+V I D  ++ G+ + Q L   P   F  CDVT+E+DV + V  T+ +FG 
Sbjct: 26  VRAFVNSGARVVICDKDESGGRALEQEL---PGAVFILCDVTQEDDVKTLVSETIRRFGR 82
Query: 95  LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC 154
           LD +VNNAG    P     E     F ++ ++N+ G +   K A   +  +++G +I+I 
Sbjct: 83  LDCVVNNAG-HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR-KSQGNVINIS 140
Query: 155 SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPE 212
           S+ GAIG      Y  +K AV  + K +A +   YG+RVNC+SP  + T L   LA L  
Sbjct: 141 SLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMP 200
Query: 213 EERT--EDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
           + R    + M+         A   G      +V  A +FLAS EA + +G  L+V GG
Sbjct: 201 DPRASIREGML---------AQPLGRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGG 248

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 134/279 (48%), Gaps = 33/279 (11%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---QDNLG--QQVCQSLGGEPD-- 67
           R+ G+VA I+G A G G S      + GA +   D+    +NL       + L    D  
Sbjct: 12  RVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLV 71
Query: 68  ------TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSE 119
                       DV   E + SAVD  VE+ G LDI+V NAG+   G     IR+   + 
Sbjct: 72  KDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRD---NV 128
Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           ++ + DIN+ GV+H +K     ++   +G +I+   SV G         Y  +KH V+GL
Sbjct: 129 WQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGL 188
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLAL------AHLPEEERTEDAMVGFRNFVARNAN 232
            +  A ELG + IRVN V P  V+T + +         P+ E       G  +F   +  
Sbjct: 189 MRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENP-----GPDDFAPISQM 243
Query: 233 MQGTELT---ANDVANAVLFLASDEARYISGTNLMVDGG 268
           M    +    A+D++NAVLFLASDE+RY++G +L VD G
Sbjct: 244 MHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 13/214 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           AV+ + G VA+ITGGA+G+G ST +     GA   + DV ++ G+   + LGG  +  F 
Sbjct: 4   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGG--NCIFA 61
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDIN 127
             +VT E++V +A+ L  EKFG +D+ VN AGI+ A      + +    L +F++V ++N
Sbjct: 62  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVN 121
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A +M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 122 LIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +A +L   GIRV  ++P   AT L L  LP++ R
Sbjct: 182 IARDLAPIGIRVVTIAPGLFATPL-LTTLPDKVR 214

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 13/214 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           AV+ + G VA+ITGGA+G+G ST +     GA   + DV ++ G+   + LGG  +  F 
Sbjct: 3   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGG--NCIFA 60
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDIN 127
             +VT E++V +A+ L  EKFG +D+ VN AGI+ A      + +    L +F++V ++N
Sbjct: 61  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVN 120
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A +M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 121 LIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 180
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +A +L   GIRV  ++P   AT L L  LP++ R
Sbjct: 181 IARDLAPIGIRVVTIAPGLFATPL-LTTLPDKVR 213

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 134/276 (48%), Gaps = 39/276 (14%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFF 70
           R   +VA+ITG + GIG +T  LF + GAKV I    A+  +   QQ+  +   E +   
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-----DLSEFEKVFD 125
              DVT +      +  T+ KFG LDI+VNNA   GA  PD +        +  ++   +
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNA---GAAIPDSQSKTGTAQSIESYDATLN 119
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA------YTGSKHAVLGLN 179
           +N++ V    K A    +  TKG I++I S+A      G HA      Y+ +K A+    
Sbjct: 120 LNLRSVIALTKKAVP-HLSSTKGEIVNISSIAS-----GLHATPDFPYYSIAKAAIDQYT 173
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNANMQ---- 234
           +N A +L ++GIRVN +SP  VATG   A  +PEE          + F +  A M+    
Sbjct: 174 RNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETS--------KKFYSTMATMKECVP 225
Query: 235 -GTELTANDVANAVLFLASDE-ARYISGTNLMVDGG 268
            G      D+A  + FLA  + + YI G  L+VDGG
Sbjct: 226 AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 261

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---QDNLGQQVCQSLGGEPDTFFC 71
           RL G+VA ITG A G G +      + GA +   D+   Q NL         G P+    
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNL-----DYAQGSPEELKE 97
Query: 72  HCDVTKEE------------DVCS---AVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD 116
              + +E+            D+ S    VD  + +FG +DI+V+N GIS     ++    
Sbjct: 98  TVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQG--EVVSLT 155
Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAV 175
             ++  +   N+ G +H  +     MI + +G ++I + S  G  G  G   Y  SKH V
Sbjct: 156 DQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGV 215
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH------LP--EEERTEDAMVGFRNFV 227
            GL  ++A E+G++ IRVN V+P AV T +AL        LP  E    EDA   F    
Sbjct: 216 QGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLT 275
Query: 228 ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                +    +   DV+NAV +LASDEARYI G  + VDGG
Sbjct: 276 L----LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 119/214 (55%), Gaps = 13/214 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           AV+ + G VA+ITGGA+G+G ST +     GA   + DV ++ G+   + LGG  +  F 
Sbjct: 4   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGG--NCIFA 61
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD----LSEFEKVFDIN 127
             +VT E++V +A+ L  EKFG +D+ VN AGI+ A      + +    L +F++V ++N
Sbjct: 62  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVN 121
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A +M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 122 LIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +A +L   GIRV  ++P   AT L L  LP+  R
Sbjct: 182 IARDLAPIGIRVVTIAPGLFATPL-LTTLPDTVR 214

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 125/256 (48%), Gaps = 18/256 (7%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL  +  LITG A GIG +T+ LF K GA++   D+++   ++  +++G  P       D
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP----VVXD 57
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V     V       +   G LD +V+ AGI+        +  L ++E V  +N+ G F  
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFH--WKXPLEDWELVLRVNLTGSFLV 115
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A+     +  G+I+   S    +G LG   Y  S   V+GL + +A ELG++GIRVN
Sbjct: 116 AKAASEAXREKNPGSIVLTASRV-YLGNLGQANYAASXAGVVGLTRTLALELGRWGIRVN 174
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            ++P  + T    A +PE+ R        +   A      G  L   +VA A LFL SDE
Sbjct: 175 TLAPGFIET-RXTAKVPEKVRE-------KAIAATPLGRAGKPL---EVAYAALFLLSDE 223
Query: 255 ARYISGTNLMVDGGFT 270
           + +I+G  L VDGG T
Sbjct: 224 SSFITGQVLFVDGGRT 239

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 17/254 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG   +      +V
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--DNGKGXALNV 64
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  E + + +    ++FG +DI+VNNAGI+      +      E+  + + N+  +F   
Sbjct: 65  TNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LXRXKEEEWSDIXETNLTSIFRLS 122
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R    + +G II++ SV G  G  G   Y  +K  V+G  K+ A E+   G+ VN 
Sbjct: 123 KAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNT 182
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASDE 254
           V+P  + T    A L +E+RT           A  A +    L    ++A+AV FLAS E
Sbjct: 183 VAPGFIETDXTKA-LNDEQRT-----------ATLAQVPAGRLGDPREIASAVAFLASPE 230
Query: 255 ARYISGTNLMVDGG 268
           A YI+G  L V+GG
Sbjct: 231 AAYITGETLHVNGG 244

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 123/257 (47%), Gaps = 12/257 (4%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDV 75
           +VAL+TG   GIG++      K G  V IAD  D   + V   +   GG         DV
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH--AVAVKVDV 60
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           +  + V +AV+   +  G  D++VNNAG+  AP   I        +KV++INVKGV  G+
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGV--APSTPIESITPEIVDKVYNINVKGVIWGI 118
Query: 136 KHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           + A      +  G  II+ CS AG +G      Y+ SK AV GL +  A +L   GI VN
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178
Query: 195 CVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
              P  V T +   +     E   +    G   F  R    + +E    DVA  V +LAS
Sbjct: 179 GYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSE--PEDVAACVSYLAS 236
Query: 253 DEARYISGTNLMVDGGF 269
            ++ Y++G +L++DGG 
Sbjct: 237 PDSDYMTGQSLLIDGGM 253

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 116/252 (46%), Gaps = 25/252 (9%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-HCDVTK 77
           R  L+TGG  GIG +  R F   G KV I               G  P+ F    CD+T 
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAI-----------TYRSGEPPEGFLAVKCDITD 70
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            E V  A     E  G +++++ NAG++      +      +F  V + N+ G F  +K 
Sbjct: 71  TEQVEQAYKEIEETHGPVEVLIANAGVTKDQL--LMRMSEEDFTSVVETNLTGTFRVVKR 128
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           A R M+   KG ++ I SV G +G  G   Y  SK  ++G  +++A ELG   I  N V+
Sbjct: 129 ANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVA 188
Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  V T +    L +E+R         N V++     G      ++A  V FLASD+A Y
Sbjct: 189 PGFVDTDMTKV-LTDEQRA--------NIVSQVP--LGRYARPEEIAATVRFLASDDASY 237
Query: 258 ISGTNLMVDGGF 269
           I+G  + VDGG 
Sbjct: 238 ITGAVIPVDGGL 249

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 120/257 (46%), Gaps = 16/257 (6%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGGEPDTFFCH 72
           QRL  ++A+ITGGA GIG +    F   GA + IAD V     +   ++LG    T    
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLT--VK 60
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV++  DV +     +  FG  DI+VNNAGI   P     E    +++K F+INV   F
Sbjct: 61  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY--PLIPFDELTFEQWKKTFEINVDSGF 118
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K     M     G II++ S    +       Y  +K A +G  + +A++LGK GI 
Sbjct: 119 LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGIT 178
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVG-FRNFVARNANMQGTELTANDVANAVLFLA 251
           VN ++P  V T         E     AM     N +     +Q       D+  A  FLA
Sbjct: 179 VNAIAPSLVRTATT------EASALSAMFDVLPNMLQAIPRLQ----VPLDLTGAAAFLA 228
Query: 252 SDEARYISGTNLMVDGG 268
           SD+A +I+G  L VDGG
Sbjct: 229 SDDASFITGQTLAVDGG 245

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 133/262 (50%), Gaps = 17/262 (6%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ ALITG A GIG +    + + GA V IAD+     +Q    +G  P  +    
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--PAAYAVQX 61
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDI-READLSEFEKVFDINVKGV 131
           DVT+++ + +A+  TVE  G LDI+VNNA +   AP  +I RE+    +EK+F INV G 
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES----YEKLFAINVAGT 117
Query: 132 FHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
              ++ AAR  I Q + G II+  S AG  G      Y  +K AV+ L ++   +L K+ 
Sbjct: 118 LFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHR 177
Query: 191 IRVNCVSPYAVATGLALAHLPEEE----RTEDAMVGFRNFVARNANMQGTELTANDVANA 246
           I VN ++P  V  G    H    +    R E+   G +  +   A   G   TA D+   
Sbjct: 178 INVNAIAP-GVVDG---EHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGX 233
Query: 247 VLFLASDEARYISGTNLMVDGG 268
            +FLAS E+ YI      VDGG
Sbjct: 234 AIFLASAESDYIVSQTYNVDGG 255

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 22/256 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVC-IADVQ---DNLGQQVCQS-LGGEPDTFFCHC 73
           +VA++TG + GIG +      + GA V   A  +   + +G    Q+ L G         
Sbjct: 29  QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL---- 84
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +V     V + V+ T+++FG L+++VNNAGI+      +R  D  E++ V D N+K VF 
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLA-MRMKD-DEWDAVIDTNLKAVFR 142
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +   R M+    G I++I SV G+ G  G   Y  +K  V G+ + +A E+G  GI V
Sbjct: 143 LSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITV 202
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NCV+P  + T +    LP+E++T            +     G   +  D+A+AV FLAS 
Sbjct: 203 NCVAPGFIDTDMT-KGLPQEQQT----------ALKTQIPLGRLGSPEDIAHAVAFLASP 251
Query: 254 EARYISGTNLMVDGGF 269
           +A YI+GT L V+GG 
Sbjct: 252 QAGYITGTTLHVNGGM 267

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 28/257 (10%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVT 76
           VA++TG A GIG +    F K GA V + D++    + V  ++   GG+       C+VT
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK--AIGLECNVT 71
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            E+   + +   +++FG + ++VNNAG  G P P   +  +S+FE  F +N+  +F   +
Sbjct: 72  DEQHREAVIKAALDQFGKITVLVNNAG-GGGPKP--FDMPMSDFEWAFKLNLFSLFRLSQ 128
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
            AA  M     G I++I S+AG    +   +Y  SK AV  L +N+A ++G  GIRVN +
Sbjct: 129 LAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAI 188
Query: 197 SPYAVAT-GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLA 251
           +P A+ T  LA    PE ER               A ++ T L     A D+ANA LFL 
Sbjct: 189 APGAIKTDALATVLTPEIER---------------AMLKHTPLGRLGEAQDIANAALFLC 233
Query: 252 SDEARYISGTNLMVDGG 268
           S  A +ISG  L V GG
Sbjct: 234 SPAAAWISGQVLTVSGG 250

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 17/217 (7%)
Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSL 62
           +N    +P V  L  +V LITG   G+G+   + F K+GAKV + D +D        ++ 
Sbjct: 309 ANDASGAPTVS-LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAA 367
Query: 63  GGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS-- 118
           GGE  PD      DV K+ +    +   ++K+GT+DI+VNNAGI      D   A +S  
Sbjct: 368 GGEAWPD----QHDVAKDSEAI--IKNVIDKYGTIDILVNNAGI----LRDRSFAKMSKQ 417
Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           E++ V  +++ G F+  + A    + +  G II+I S +G  G  G   Y+ SK  +LGL
Sbjct: 418 EWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGL 477
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +K +A E  K  I+VN V+P+A  T + L+ + E+++
Sbjct: 478 SKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQDK 513

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 131/265 (49%), Gaps = 24/265 (9%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
           ++    +VA++TGG++GIG + V    ++GAKV    + +     V        D F   
Sbjct: 9   MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVS-------DHF--K 59
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT EE+V  AV+ T +K+G +DI+VNNAGI       +   ++  + ++ D+NV G +
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEI--WRRIIDVNVNGSY 117
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K+   +M+    G+II+I SV          AY  SKHA+LGL ++VA +     IR
Sbjct: 118 LMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIR 176
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT------ANDVANA 246
            N V P  + T + +    + E  ED      N V R     G +          +VA  
Sbjct: 177 CNAVCPGTIMTPMVI-KAAKMEVGED-----ENAVERKIEEWGRQHPMGRIGRPEEVAEV 230
Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
           V FLASD + +I+G  L VDGG  S
Sbjct: 231 VAFLASDRSSFITGACLTVDGGLLS 255

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 15/258 (5%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L GR AL+TG   GIGE+  R FH  GA V +   +++  +++   LG   D F    +
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG--KDVFVFSAN 81
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           ++  + +    ++   +   +DI+VNNAGI+      +R  D  +++ V  +N+      
Sbjct: 82  LSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLF-VRMQD-QDWDDVLAVNLTAASTL 139
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +     M+ +  G II+I S+ G +G  G   Y  +K  ++G +K +A E+    I VN
Sbjct: 140 TRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVN 199
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           C++P  + + +      +++    AM+  +                 ++A A ++LASDE
Sbjct: 200 CIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMG-----------IGEEIAFATVYLASDE 248
Query: 255 ARYISGTNLMVDGGFTSV 272
           A Y++G  L ++GG   +
Sbjct: 249 AAYLTGQTLHINGGMAMI 266

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 124/274 (45%), Gaps = 29/274 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---------------QVCQ 60
           L G+VA ITG A G G +        GA +   D+ D +                 ++ +
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
            +G          DV   E + +A+   +++ G LDI+V NAGI+     D        +
Sbjct: 71  DIGSR--IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGD------DGW 122
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAG--AIGGLGPHA--YTGSKHAV 175
             V D+N+ GV+H +K A   ++ Q T G+I+ I S AG   +G   P +  Y  +KH V
Sbjct: 123 HDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGV 182
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL +  A  L    IRVN + P  V T +       E   + A          NA M  
Sbjct: 183 VGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA-MPV 241
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
             L   DVANAV +L SD+ARYI+G  L VD GF
Sbjct: 242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 129/268 (48%), Gaps = 31/268 (11%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+ ALITG A GIG +    + + GA+V IAD+     +     +G  P       D
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG--PAACAIALD 59
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDI-READLSEFEKVFDINVKGVF 132
           VT +  +   V   ++++G++DI+VNNA +   AP  +I RE+    ++++F INV G  
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRES----YDRLFAINVSGTL 115
Query: 133 HGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             M+  AR MI   + G II++ S AG  G      Y  +K AV+ L ++    L ++GI
Sbjct: 116 FMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 175
Query: 192 RVNCVSPYAV---------ATGLALAHLP--EEERTEDAMVGFRNFVARNANMQGTELTA 240
            VN ++P  V         A      +LP  E++R   A V F           G    A
Sbjct: 176 NVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-----------GRMGRA 224
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            D+    +FLA+ EA YI      VDGG
Sbjct: 225 EDLTGMAIFLATPEADYIVAQTYNVDGG 252

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-------------QDNLGQQVCQS 61
           ++ G+VA ITG A G G S      + GA +   DV              D+L + V Q 
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
                       DV   + + +AVD  V + G LDI++ NA ++      +   D   + 
Sbjct: 85  EALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGT-RLNRMDPKTWR 143
Query: 122 KVFDINVKGVFHGMKHAARIMIP-----QTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
            + D+N+ G +      AR+ IP     +  G+I+   S+ G  G      Y  SKH + 
Sbjct: 144 DMIDVNLNGAWI----TARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLH 199
Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAH------LPEEER--TEDAMVGFRNFVA 228
           GL + +A ELG   IRVN V P +VAT + L         P+ E    ED  V  R    
Sbjct: 200 GLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV 259
Query: 229 RNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
               +    +   D++NA+LFL SD+ARYI+G +L VDGG
Sbjct: 260 ----LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score =  104 bits (259), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----GGEPDTFFCHCD 74
           +VA++TGGA GIG          G  + +AD+     +Q  +++      +    F   D
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQ-EEQAAETIKLIEAADQKAVFVGLD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           VT + +  SA+D   EK G  D++VNNAGI+   P  ++ E DL   ++++ +NV  VF 
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDL---KQIYSVNVFSVFF 118
Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           G++ A+R       KG II+  S+A   G     AY+ +K AV GL +  A EL   G  
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ-GTELTANDVANAVLFLA 251
           VN  +P  V TG+      E  +     +G  NF   ++++  G      DVA  V FLA
Sbjct: 179 VNAYAPGIVGTGMWEQIDAELSKINGKPIG-ENFKEYSSSIALGRPSVPEDVAGLVSFLA 237
Query: 252 SDEARYISGTNLMVDGG 268
           S+ + Y++G  ++VDGG
Sbjct: 238 SENSNYVTGQVMLVDGG 254

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  103 bits (258), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 26/259 (10%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHC---- 73
           +VAL+TG   GIG    ++  K  + V CI+  Q     + C S+  E  +F        
Sbjct: 45  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ-----KSCDSVVDEIKSFGYESSGYA 99
Query: 74  -DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+K+E++   ++  + +   +DI+VNNAGI+        + D  E+E V   N+  +F
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKND--EWEDVLRTNLNSLF 157
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +  +  ++ MI    G II+I S+ G  G +G   Y+ SK  V+G  K++A EL    I 
Sbjct: 158 YITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNIT 217
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLA 251
           VN ++P  +++ +    + E+ +        +N +   +N+    + T  +VAN   FL+
Sbjct: 218 VNAIAPGFISSDMT-DKISEQIK--------KNII---SNIPAGRMGTPEEVANLACFLS 265
Query: 252 SDEARYISGTNLMVDGGFT 270
           SD++ YI+G   ++DGG +
Sbjct: 266 SDKSGYINGRVFVIDGGLS 284

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score =  103 bits (258), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE 79
           VA++TGGA+G+G +T +     GA+V + D++   G+ V   LG      F   DVT E 
Sbjct: 11  VAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDR--ARFAAADVTDEA 65
Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA--DLSEFEKVFDINVKGVFHGMKH 137
            V SA+DL  E  GTL I+VN AG   A     R+    L+ F K+ DIN+ G F+ ++ 
Sbjct: 66  AVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRL 124
Query: 138 AARIMIP--------QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           AA  +          + +G II+  SVA   G +G  AY+ SK  V+G+   +A +L  +
Sbjct: 125 AAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASH 184
Query: 190 GIRVNCVSPYAVATGLALAHLPEEER 215
            IRV  ++P    T L LA LPEE R
Sbjct: 185 RIRVMTIAPGLFDTPL-LASLPEEAR 209

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 120/262 (45%), Gaps = 10/262 (3%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++K E V   VD  V + G +DI+VNNAGI       I +    +++ +  +N+  VF
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVF 119
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           HG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 193 VNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            N + P  V T L    ++ L E+   +           +  ++Q   +T   +    +F
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQLGGTAVF 237
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LASD A  I+GT + VDGG+T+
Sbjct: 238 LASDAAAQITGTTVSVDGGWTA 259

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           A + + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG   +  F 
Sbjct: 4   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN--NCVFA 61
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREAD---LSEFEKVFDIN 127
             DVT E+DV +A+ L   KFG +D+ VN AGI+  +   ++++     L +F++V D+N
Sbjct: 62  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 121
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 122 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEER 215
           +A +L   GIRV  ++P    T L L  LPE+ R
Sbjct: 182 IARDLAPIGIRVMTIAPGLFGTPL-LTSLPEKVR 214

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 129/261 (49%), Gaps = 14/261 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFFCH 72
           L G++AL+TG + GIG +    + K GA +   D+   L   G    ++ G     + C 
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVC- 90
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT E+ + + V     + G +DI+VNNAGI     P I E   ++F +V DI++   F
Sbjct: 91  -DVTDEDGIQAMVAQIESEVGIIDILVNNAGII-RRVPMI-EMTAAQFRQVIDIDLNAPF 147
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K     MI +  G II+ICS+   +G     AY  +K  +  L KN+A+E G+  I+
Sbjct: 148 IVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQ 207
Query: 193 VNCVSPYAVATGLALAHLPEEERTED-AMVGFRNF-VARNANMQGTELTANDVANAVLFL 250
            N + P  +AT       P  E  +D +   F  F +A+    +  E  A D+    +FL
Sbjct: 208 CNGIGPGYIATPQT---APLRELQKDGSRHPFDQFIIAKTPAARWGE--AEDLMGPAVFL 262
Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD + +++G  L VDGG  +
Sbjct: 263 ASDASNFVNGHILYVDGGILA 283

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 117/252 (46%), Gaps = 30/252 (11%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G++AL+TG + GIG +        GAKV      +N  Q +   LG          +VT 
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML--NVTD 62
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              + S ++    +FG +DI+VNNAGI+      +R  D  E+  + + N+  VF   K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKD-EEWNDIIETNLSSVFRLSKA 120
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
             R M+ +  G II+I          G   Y  +K  ++G +K++A E+   GI VN V+
Sbjct: 121 VMRAMMKKRHGRIITIG---------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 171
Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY 257
           P  +            E ++D   G    V       G    A ++ANAV FLASDEA Y
Sbjct: 172 PGFI------------ETSDDQRAGILAQVP-----AGRLGGAQEIANAVAFLASDEAAY 214
Query: 258 ISGTNLMVDGGF 269
           I+G  L V+GG 
Sbjct: 215 ITGETLHVNGGM 226

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           LITG + GIGE+T RL H  G +V +    +   Q +   L G         DV +E D 
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG---ALPLPGDVREEGDW 65
Query: 82  CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI 141
             AV    E FG L  +VNNAG+ G   P + E  L E+  V D N+ G F G++HA   
Sbjct: 66  ARAVAAMEEAFGELSALVNNAGV-GVMKP-VHELTLEEWRLVLDTNLTGAFLGIRHAVPA 123
Query: 142 MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAV 201
           ++ +  GTI+++ S+AG     G  AY  SK  +LGL      +L +  +RV  V P +V
Sbjct: 124 LLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSV 183
Query: 202 ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            TG                       A N   Q  +L   DVA AVLF
Sbjct: 184 DTGF----------------------AGNTPGQAWKLKPEDVAQAVLF 209

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 127/269 (47%), Gaps = 24/269 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT------- 68
           L G+ A++TG  +GIG +      K GA V I    +  GQ   + +  E  T       
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVI----NGFGQP--EDIERERSTLESKFGV 55
Query: 69  --FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFD 125
             ++ + D++  +     +    E  G LDI+VNNAGI   AP   I E  + ++  +  
Sbjct: 56  KAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAP---IEEFPVDKWNAIIA 112
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +N+  VFHG   A  IM  Q  G II+I S  G +  +   AY  +KH V+GL K  A E
Sbjct: 113 LNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALE 172
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLP--EEERTEDAMVGFRNFVA-RNANMQGTELTAND 242
               GI  N + P  V T L    +    +++  D     R  +A +  ++Q   +T   
Sbjct: 173 NAGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQ--FVTPEQ 230
Query: 243 VANAVLFLASDEARYISGTNLMVDGGFTS 271
           +  A +FL+S  A  ++GT L +DGG+T+
Sbjct: 231 LGGAAVFLSSAAADQMTGTTLSLDGGWTA 259

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 10/262 (3%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++K E V   VD  V + G +DI+VNNAGI       I +    +++ +  +N+  VF
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVF 119
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           HG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 193 VNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            N + P  V + L    ++ L E+   +           +  ++Q   +T   +    +F
Sbjct: 180 ANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQLGGTAVF 237
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LASD A  I+GT + VDGG+T+
Sbjct: 238 LASDAAAQITGTTVSVDGGWTA 259

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 121/258 (46%), Gaps = 10/258 (3%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFC 71
           + RL G++A++TG ++GIG +   LF + GAKV +     N L +   +  GG  +    
Sbjct: 3   MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAAL 62
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV  E    + V+L V +FG LD   NNAG  GA   +I    +  + +  D N+   
Sbjct: 63  AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSA 121
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYG 190
           F   K+    +     G++    S  G   G  G   Y  SK  ++GL + +A ELG  G
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARG 181
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN + P    T    A+LP         V   + + R A  +       ++A A L+L
Sbjct: 182 IRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPE-------EIAEAALYL 234
Query: 251 ASDEARYISGTNLMVDGG 268
           ASD A +++G  L+ DGG
Sbjct: 235 ASDGASFVTGAALLADGG 252

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 132/270 (48%), Gaps = 30/270 (11%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
           P    L G+VALITG  +G GE   + F K GAKV I D      ++V   +G       
Sbjct: 2   PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA--ALA 59
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL---SEFEKVFDIN 127
              D++KE DV +AV+  + KFG +DI+VNNAGI   P    + A+L    EF+++  +N
Sbjct: 60  VAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKP----QNAELVEPEEFDRIVGVN 115
Query: 128 VKGVFHGMKHAARIMIPQ-----TKGTIISICSVAGAIGGLGPHA----YTGSKHAVLGL 178
           V+GV+         +IP       KG    I +VA + G   P      Y  +K  V+ +
Sbjct: 116 VRGVYLMTSK----LIPHFKENGAKGQECVILNVA-STGAGRPRPNLAWYNATKGWVVSV 170
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            K +A EL    IRV  ++P A  T L    + E+  +E+    FR+ +       G  L
Sbjct: 171 TKALAIELAPAKIRVVALNPVAGETPLLTTFMGED--SEEIRKKFRDSIP-----MGRLL 223
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
             +D+A A  FL S +A  I+G  L VDGG
Sbjct: 224 KPDDLAEAAAFLCSPQASMITGVALDVDGG 253

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 10/262 (3%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++K E V   VD  V + G +DI+VNNAGI       I +    +++ +  +N+  VF
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSAVF 119
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           HG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 193 VNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            N + P  V   L    ++ L E+   +           +  ++Q   +T   +    +F
Sbjct: 180 ANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ--FVTPEQLGGTAVF 237
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           LASD A  I+GT + VDGG+T+
Sbjct: 238 LASDAAAQITGTTVSVDGGWTA 259

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 13/212 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           A + + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG   +  F 
Sbjct: 4   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN--NCVFA 61
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREAD---LSEFEKVFDIN 127
             DVT E+DV +A+ L   KFG +D+ VN AGI+  +   ++++     L +F++V D+N
Sbjct: 62  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 121
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 122 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
           +A +L   GIRV  ++P    T L L  LPE+
Sbjct: 182 IARDLAPIGIRVMTIAPGLFGTPL-LTSLPEK 212

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 13/212 (6%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC 71
           A + + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG   +  F 
Sbjct: 6   ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN--NCVFA 63
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREAD---LSEFEKVFDIN 127
             DVT E+DV +A+ L   KFG +D+ VN AGI+  +   ++++     L +F++V D+N
Sbjct: 64  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 123
Query: 128 VKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+   
Sbjct: 124 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 183
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
           +A +L   GIRV  ++P    T L L  LPE+
Sbjct: 184 IARDLAPIGIRVMTIAPGLFGTPL-LTSLPEK 214

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 126/284 (44%), Gaps = 39/284 (13%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-----------------QDNLGQQ 57
           R+ G+VA +TG A G G S      + GA +   D+                  ++L + 
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67
Query: 58  VCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREA 115
                G          DV   + + +AVD  VE+ G LDI+V NAGI   G       E 
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEE 127
Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG----S 171
           D +E     DIN+ GV+  +K     MI   +G  I + S   ++GGL  + +TG    +
Sbjct: 128 DWTEM---IDINLAGVWKTVKAGVPHMIAGGRGGSIILTS---SVGGLKAYPHTGHYVAA 181
Query: 172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT------GLALAHLPEEERT-EDAMVGFR 224
           KH V+GL +    ELG++ IRVN V P  V T      G      P+ E    D M    
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPIC 241
Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                   +    +   D++NAVLF ASDEARYI+G  L +D G
Sbjct: 242 QMF---HTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 126/233 (54%), Gaps = 20/233 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           ++ +ITG ++GIGE+  R F + G  + +      L ++V   ++L   P+T     DVT
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLL------LARRVERLKALN-LPNTLCAQVDVT 69
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            +    +A+    + +G  D +VNNAG+      D +EA+  E++++FD+NV G+ +GM+
Sbjct: 70  DKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEAN--EWQRMFDVNVLGLLNGMQ 127
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
                M  +  GTII+I S+AG        AY G+K AV  +++NV  E+    +RV  +
Sbjct: 128 AVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTI 187
Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           +P AV T L L+H   ++  +D    +R       +M G  L A+DVA AVLF
Sbjct: 188 APSAVKTEL-LSHTTSQQ-IKDGYDAWR------VDMGGV-LAADDVARAVLF 231

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 15/257 (5%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCH 72
           +L G+V+L+TG   GIG +        G+ V I        + V + +  +         
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            ++  EE +  A +        +DI+VNNAGI+           L ++E+V  +N+ G F
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKL--FLRMSLLDWEEVLKVNLTGTF 121
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +++ R MI Q  G I++I SV G  G +G   Y+ +K  ++G  K++A EL    + 
Sbjct: 122 LVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVL 181
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+P  + T +      E ++     +    F            +  +VAN VLFL S
Sbjct: 182 VNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFG-----------SPEEVANVVLFLCS 230
Query: 253 DEARYISGTNLMVDGGF 269
           + A YI+G  + V+GG 
Sbjct: 231 ELASYITGEVIHVNGGM 247

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 123/256 (48%), Gaps = 27/256 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF-CHCD 74
            V R  L+TGG  GIG +  +     G KV            V     G P   F   CD
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVA-----------VTHRGSGAPKGLFGVECD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT  + V  A     E  G ++++V+NAG+S A    +R  +  +FEKV + N+ G F  
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTE-EKFEKVINANLTGAFRV 119
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIRV 193
            + A+R M     G +I I SV+G+  G+G  A Y  SK  V+G+ +++A EL K  +  
Sbjct: 120 AQRASRSMQRNKFGRMIFIGSVSGSW-GIGNQANYAASKAGVIGMARSIARELSKANVTA 178
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  + T +  A    +ER +   + F    A+         T  +VA  V FLAS+
Sbjct: 179 NVVAPGYIDTDMTRAL---DERIQQGALQF--IPAKRVG------TPAEVAGVVSFLASE 227
Query: 254 EARYISGTNLMVDGGF 269
           +A YISG  + VDGG 
Sbjct: 228 DASYISGAVIPVDGGM 243

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 117/257 (45%), Gaps = 15/257 (5%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ AL+TG A GIG++        GA V ++D+     +    S+G +        
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARA--IAA 59
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++    V +         G +DI+VNNA I   P     + DL  + K+ D+N+ G F 
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASI--VPFVAWDDVDLDHWRKIIDVNLTGTFI 117
Query: 134 GMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +     M    K G +ISI S     G     AY  +K  V+G  + +A ELGKY I 
Sbjct: 118 VTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNIT 177
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            N V+P  + +    A  P  E           FV     M+G +     +A+ V FLAS
Sbjct: 178 ANAVTPGLIESDGVKAS-PHNEAF--------GFVEMLQAMKG-KGQPEHIADVVSFLAS 227
Query: 253 DEARYISGTNLMVDGGF 269
           D+AR+I+G  L VD G 
Sbjct: 228 DDARWITGQTLNVDAGM 244

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 16/255 (6%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDV 75
           R ALITG + GIG +      + G  + I   Q+    +         G P       ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            + E   + V    E  G LD +VNNAGI+      +R  D  ++E V + N+  VF   
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLL-VRMKD-EDWEAVLEANLSAVFRTT 119
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + A ++M+    G I++I SV G +G  G   Y  SK  ++G  + VA E  + GI VN 
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P  + T +    LP+E   ++A    +   A      G      +VA AV FL S++A
Sbjct: 180 VAPGFIETEMT-ERLPQE--VKEAY--LKQIPA------GRFGRPEEVAEAVAFLVSEKA 228
Query: 256 RYISGTNLMVDGGFT 270
            YI+G  L VDGG T
Sbjct: 229 GYITGQTLCVDGGLT 243

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 23/271 (8%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFF 70
           R  G+  +ITG + GIG S   +F K GA+V I     D  +   QQ+ ++         
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT+       ++ T+ KFG +DI+VNNAG + A      +  +  ++K F +N + 
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG------SKHAVLGLNKNVAA 184
           V   M    +  + +TKG I+++ S+       GP A++G      +K A+    +  A 
Sbjct: 143 VIE-MTQKTKEHLIKTKGEIVNVSSIVA-----GPQAHSGYPYYACAKAALDQYTRCTAI 196
Query: 185 ELGKYGIRVNCVSPYAVATGLALAH-LPEEERTE-DAMVGFRNFVARNANMQGTELTAND 242
           +L ++G+RVN VSP AVATG   A  LPE    +  + +G R       +    E    +
Sbjct: 197 DLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE----E 252
Query: 243 VANAVLFLAS-DEARYISGTNLMVDGGFTSV 272
           +AN ++FLA  + + YI G +++ DGG T V
Sbjct: 253 IANIIVFLADRNLSSYIIGQSIVADGGSTLV 283

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 136/263 (51%), Gaps = 28/263 (10%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+V ++T  A GIG++    F + GAKV   D+ ++  Q++ +  G +        D
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL----D 58
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           VTK++ +    D    +   LD++ N AG +      D  E D   ++   ++NV+ ++ 
Sbjct: 59  VTKKKQI----DQFANEVERLDVLFNVAGFVHHGTVLDCEEKD---WDFSMNLNVRSMYL 111
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIR 192
            +K     M+ Q  G II++ SVA ++ G+     Y+ +K AV+GL K+VAA+  + GIR
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171
Query: 193 VNCVSPYAVATGLALAHL-----PEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            NCV P  V T      +     PEE R +        F+ R     G   TA ++A   
Sbjct: 172 CNCVCPGTVDTPSLQERIQARGNPEEARND--------FLKRQKT--GRFATAEEIAMLC 221
Query: 248 LFLASDEARYISGTNLMVDGGFT 270
           ++LASDE+ Y++G  +++DGG++
Sbjct: 222 VYLASDESAYVTGNPVIIDGGWS 244

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 97.4 bits (241), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 126/260 (48%), Gaps = 15/260 (5%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
           V RL G  A +TG  +GIG    R F   GA++ + D +     +  Q LG         
Sbjct: 6   VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIV- 64
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DVT + +  +A     E    + I+VN+AGI  A   D  E D + + +V  +NV G+F
Sbjct: 65  ADVT-DAEAMTAAAAEAEAVAPVSILVNSAGI--ARLHDALETDDATWRQVMAVNVDGMF 121
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELGKYG 190
              +   R M+ +  G I+++ S++G I      A  Y  SK AV  L + +AAE    G
Sbjct: 122 WASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRG 181
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +RVN ++P  VAT + L      ER E     F  ++  +    G     +++A A LFL
Sbjct: 182 VRVNALAPGYVATEMTLKM---RERPEL----FETWL--DMTPMGRCGEPSEIAAAALFL 232
Query: 251 ASDEARYISGTNLMVDGGFT 270
           AS  A Y++G  L VDGG+T
Sbjct: 233 ASPAASYVTGAILAVDGGYT 252

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 27/270 (10%)
Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS 61
           S+  +T +  A    V R  L+TGG  GIG +  +     G KV            V   
Sbjct: 19  SHMTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVA-----------VTHR 67
Query: 62  LGGEPDTFF-CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
             G P   F    DVT  + V  A     E  G ++++V+NAG+S A    +R  +  +F
Sbjct: 68  GSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTE-EKF 125
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLN 179
           EKV + N+ G F   + A+R M     G +I I SV+G + G+G  A Y  SK  V+G+ 
Sbjct: 126 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIASVSG-LWGIGNQANYAASKAGVIGMA 184
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           +++A EL K  +  N V+P  + T +  A    +ER +   + F    A+         T
Sbjct: 185 RSIARELSKANVTANVVAPGYIDTDMTRAL---DERIQQGALQF--IPAKRVG------T 233
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGF 269
             +VA  V FLAS++A YISG  + VDGG 
Sbjct: 234 PAEVAGVVSFLASEDASYISGAVIPVDGGM 263

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 20/258 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHC 73
           L  R  L+TGG  GIG     +F + GA V +A         V   LG  G  +      
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS--EFEKVFDINVKGV 131
           DV+       A    V+ FG LD++  NAGI     P+ R   ++  +  +V D+NVKG 
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCANAGI----FPEARLDTMTPEQLSEVLDVNVKGT 154
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYG 190
            + ++     +    +G +I   S+ G + G  G   Y  SK A LG  +  A EL   G
Sbjct: 155 VYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRG 214
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           + VN + P  + T   L  + EE         + + +AR+  M G   +  D+ +   FL
Sbjct: 215 VTVNAILPGNILT-EGLVDMGEE---------YISGMARSIPM-GMLGSPVDIGHLAAFL 263
Query: 251 ASDEARYISGTNLMVDGG 268
           A+DEA YI+G  ++VDGG
Sbjct: 264 ATDEAGYITGQAIVVDGG 281

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 14/259 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCD 74
           L GR AL+TG + G+G +        GA++ I     +   Q  Q       D      D
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD 83
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           VT E ++  A     E+   +DI+VNNAGI    P  ++  AD   +++V D N+   F 
Sbjct: 84  VTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETAD---WQRVIDTNLTSAFM 140
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + AA+ MIP+  G I++I S+   +       YT +K  +  L + +AAE  +YGI+ 
Sbjct: 141 IGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQA 200
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N + P  + T +  A +   E   DA V  R    R    Q       ++    +FL++ 
Sbjct: 201 NAIGPGYMLTDMNQALIDNPEF--DAWVKARTPAKRWGKPQ-------ELVGTAVFLSAS 251
Query: 254 EARYISGTNLMVDGGFTSV 272
            + Y++G  + VDGG  SV
Sbjct: 252 ASDYVNGQIIYVDGGMLSV 270

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 24/260 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L GR A++TG  +GIG +    + + GA V      D + ++V   +   GG  +     
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAV--- 84
Query: 73  CDVTKEEDVCSAVDLTVEKFGT--LDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVK 129
             V    D+  A ++  E   T  +D++VNNAGI + AP  ++    L  + +V  +N+ 
Sbjct: 85  --VADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEV---SLGRWREVLTVNLD 139
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +   +     M+    G I++I S+    GG    AY  SKHAV+GL + +A+E    
Sbjct: 140 AAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGR 199
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+ VN ++P  V T    A   ++ER  +         AR     G   T  D+    +F
Sbjct: 200 GVGVNALAPGYVVTANTAALRADDERAAE-------ITARIP--AGRWATPEDMVGPAVF 250
Query: 250 LASDEARYISGTNLMVDGGF 269
           LASD A Y+ G  L VDGG+
Sbjct: 251 LASDAASYVHGQVLAVDGGW 270

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 33/257 (12%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC--HCDV 75
           G+  L+TGG++GIG +    F + GA+V               +LG + D      H  +
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVV--------------ALGLDADGVHAPRHPRI 56
Query: 76  TKEE-DVCSAVDLT--VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            +EE D+  +  L    E    LD++VNNAGIS     D  E DL+ FE+V  +N+    
Sbjct: 57  RREELDITDSQRLQRLFEALPRLDVLVNNAGIS----RDREEYDLATFERVLRLNLSAAM 112
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                 AR ++ Q  G+I++I S+    G     AY+ SK A++ L +++A E     IR
Sbjct: 113 LA-SQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIR 171
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P  + T L      + E T   M   R  +AR          A +VA+A  FL  
Sbjct: 172 VNAIAPGWIDTPLGAGLKADVEATRRIMQ--RTPLARWGE-------APEVASAAAFLCG 222
Query: 253 DEARYISGTNLMVDGGF 269
             A +++G  L VDGG+
Sbjct: 223 PGASFVTGAVLAVDGGY 239

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 33/273 (12%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFF 70
           R   +  +ITG + GIG +T  LF + GA V I    ++  +   Q + +S   E     
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI-----READLSEFEKVFD 125
              DVT E+     ++ T+++FG +D++VNNAG   A  PD       +  +  + K   
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAG---AAIPDAFGTTGTDQGIDIYHKTLK 119
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA------YTGSKHAVLGLN 179
           +N++ V   M    +  +  +KG I+++ S+       GP A      Y  +K A+    
Sbjct: 120 LNLQAVIE-MTKKVKPHLVASKGEIVNVSSIVA-----GPQAQPDFLYYAIAKAALDQYT 173
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAH-LPEEERTEDAMVGFRNFVARNAN--MQGT 236
           ++ A +L K+GIRVN VSP  V TG   A  +P++   +     F NF+A +      G 
Sbjct: 174 RSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQK-----FYNFMASHKECIPIGA 228
Query: 237 ELTANDVANAVLFLAS-DEARYISGTNLMVDGG 268
                 +AN +LFLA  + + YI G +++ DGG
Sbjct: 229 AGKPEHIANIILFLADRNLSFYILGQSIVADGG 261

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 121/284 (42%), Gaps = 44/284 (15%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV--------------QDNLGQQVCQ 60
           +L GRVA ITG A G G +        GA +   D+               D+L + V  
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
                        D    + +   VD  V   G LDI+V NAG++     D  +    +F
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWD--DITPEDF 125
Query: 121 EKVFDINVKGVFHG-MKHAARIMIPQTKGTIISICSVAGAIGGLGPHA--YTGSKHAVLG 177
             V DINV G ++  M  A RI+     G+II I S AG    + P    YT SKHAV G
Sbjct: 126 RDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM--KMQPFMIHYTASKHAVTG 183
Query: 178 LNKNVAAELGKYGIRVNCVSPYAV-----------ATGLALAHLPEEERTEDAMVGFRNF 226
           L +  AAELGK+ IRVN V P  V           A G A+   P+            ++
Sbjct: 184 LARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF--LPDW 241
Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           VA             D+A+ V +LASDE+R ++   + VD G T
Sbjct: 242 VAE----------PEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 128/272 (47%), Gaps = 24/272 (8%)
Query: 9   SSPAVQR---LVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG 64
           +S  V+R   L  +VAL+T    GIG +  R   + GA V ++   Q+N+ + V    G 
Sbjct: 2   ASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE 61
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREADLSEFE 121
                   C V K ED    V + V   G +DI+V+NA ++    P   +I +A    ++
Sbjct: 62  GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVN----PFFGNIIDATEEVWD 117
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLN 179
           K+  +NVK      K     M  +  G+++ + SV        LGP  Y  SK A+LGL 
Sbjct: 118 KILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLT 175
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           KN+A EL    IRVNC++P  + T  +     ++ R E      R  + R  N +     
Sbjct: 176 KNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLR--IRRLGNPE----- 228
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
             D A  V FL S++A YI+G  ++V GG  S
Sbjct: 229 --DCAGIVSFLCSEDASYITGETVVVGGGTAS 258

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 124/275 (45%), Gaps = 21/275 (7%)
Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVC 59
           M++S  T   P    L  +VAL+T    GIG +  R   + GA V ++   Q N+ Q V 
Sbjct: 2   MASSGMTRRDP----LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVA 57
Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREAD 116
              G         C V K ED    V   V+  G +DI+V+NA ++    P    I +  
Sbjct: 58  TLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVN----PFFGSIMDVT 113
Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
              ++K  DINVK      K     M  +  G+++ + S+A      G   Y  SK A+L
Sbjct: 114 EEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALL 173
Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT 236
           GL K +A EL    IRVNC++P  + T  +     ++E+ E      R  + R    +  
Sbjct: 174 GLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLR--IRRLGEPE-- 229
Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
                D A  V FL S++A YI+G  ++V GG  S
Sbjct: 230 -----DCAGIVSFLCSEDASYITGETVVVGGGTPS 259

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 122/256 (47%), Gaps = 27/256 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF-CHCD 74
            V R  L+TGG  GIG +  +     G KV            V     G P   F    D
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVA-----------VTHRGSGAPKGLFGVEVD 61
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT  + V  A     E  G ++++V+NAG+S A    +R  +  +FEKV + N+ G F  
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTE-EKFEKVINANLTGAFRV 119
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIRV 193
            + A+R M     G +I I SV+G + G+G  A Y  SK  V+G+ +++A EL K  +  
Sbjct: 120 AQRASRSMQRNKFGRMIFIGSVSG-LWGIGNQANYAASKAGVIGMARSIARELSKANVTA 178
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  + T +  A    +ER +   + F    A+         T  +VA  V FLAS+
Sbjct: 179 NVVAPGYIDTDMTRAL---DERIQQGALQF--IPAKRVG------TPAEVAGVVSFLASE 227
Query: 254 EARYISGTNLMVDGGF 269
           +A YISG  + VDGG 
Sbjct: 228 DASYISGAVIPVDGGM 243

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
           P   R   +V ++TG   GIG++      + GA V +AD+     + V + +  +  T  
Sbjct: 2   PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAI 61
Query: 71  -CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD-IREADLSEFEKVFDINV 128
               DV+  E   +  D T+ +FG +D +VNNA I G    D +   D   ++K   +N+
Sbjct: 62  SVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNL 121
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G     +   + M  +  G I++  S A     L  + Y  +K  + GL + ++ ELG 
Sbjct: 122 DGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELGG 178
Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
             IR+N ++P  + T       P +E  +D + G    ++R         T +D+    L
Sbjct: 179 RNIRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLP--LSRMG-------TPDDLVGMCL 228
Query: 249 FLASDEARYISGTNLMVDGG 268
           FL SDEA +I+G    VDGG
Sbjct: 229 FLLSDEASWITGQIFNVDGG 248

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 94.0 bits (232), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ AL+TG A GIG++        GA V ++D+     +    S+G +        
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARA--IAA 59
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++    V +         G +DI+VNNA I   P     + DL  + K+ D+N+ G F 
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASI--VPFVAWDDVDLDHWRKIIDVNLTGTFI 117
Query: 134 GMKHAA-RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +    +       G +ISI S     G     AY  +K  V+G  + +A ELGKY I 
Sbjct: 118 VTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNIT 177
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            N V+P  + +    A  P  E       GF   +         E     +A+ V FLAS
Sbjct: 178 ANAVTPGLIESDGVKAS-PHNE-----AFGFVEXLQAXKGKGQPE----HIADVVSFLAS 227
Query: 253 DEARYISGTNLMVDGG 268
           D+AR+I+G  L VD G
Sbjct: 228 DDARWITGQTLNVDAG 243

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGG 64
           S A+Q   G+  LITG + GIG    +     G KV I     A+V D L  ++ +    
Sbjct: 22  SNAMQ-FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--- 77
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF 124
                    D   E D   A+   V+  G L  +VNNAG+         + +  +F  V 
Sbjct: 78  GYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTE--DFHHVI 135
Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           D N+   F G + A ++M     G+++++ S+ G  G +G   Y+ SK  ++ ++K+ A 
Sbjct: 136 DNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAY 195
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDV 243
           E     IR N V+P  + T +  A+L +E + +        +V    N+    L +A +V
Sbjct: 196 EGALRNIRFNSVTPGFIETDMN-ANLKDELKAD--------YVK---NIPLNRLGSAKEV 243
Query: 244 ANAVLFLASDEARYISGTNLMVDGGF 269
           A AV FL SD + YI+G  L V+GG 
Sbjct: 244 AEAVAFLLSDHSSYITGETLKVNGGL 269

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 18/258 (6%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+  L+TG A+GIG + + LF + GA +   D ++ L  +   +L  E        D
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVV--AD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+  + V +     +E+FG L  + + AG++ +         L  +EKV  +N+ G F  
Sbjct: 61  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALS--WNLPLEAWEKVLRVNLTGSFLV 118
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            + A  ++  +  G+++   SVAG +G  G   Y   K  V+GL + +A EL + G+RVN
Sbjct: 119 ARKAGEVL--EEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRVN 175
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  + T +  A LP     ++            A+  G      +VA A LFL S+E
Sbjct: 176 VLLPGLIQTPMT-AGLPPWAWEQEV----------GASPLGRAGRPEEVAQAALFLLSEE 224
Query: 255 ARYISGTNLMVDGGFTSV 272
           + YI+G  L VDGG + V
Sbjct: 225 SAYITGQALYVDGGRSIV 242

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L  +VA+ITG   GIG  T R+  + GA+V +AD+ +        S+G          D+
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGR--GAVHHVVDL 66
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T E  V + +D T++ FG LDI+ NNA  S      + +  +  ++  F +N +G     
Sbjct: 67  TNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMC 126
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K+A   +I    G I++I S           AY  +K A+  L + VA + G++G+R N 
Sbjct: 127 KYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNA 186
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           ++P  V T      LP+            +  A + ++ G     +++A  V FLASD A
Sbjct: 187 IAPGLVRTPRLEVGLPQP---------IVDIFATH-HLAGRIGEPHEIAELVCFLASDRA 236
Query: 256 RYISGTNLMVDGGF 269
            +I+G  +  D G 
Sbjct: 237 AFITGQVIAADSGL 250

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL------GQQVCQSL-------GG 64
           GRV ++TG   GIG +    F   GA+V + D+   L      G    QS+       GG
Sbjct: 27  GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG 86
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEK 122
           E        +V   +     +   VE FG LD++VNNAGI      D   A+ SE  F+ 
Sbjct: 87  E--AVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI----VRDRMIANTSEEEFDA 140
Query: 123 VFDINVKGVFHGMKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAVL 176
           V  +++KG F  M+HAA      +K      G II+  S AG  G +G   Y+ +K  + 
Sbjct: 141 VIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIA 200
Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT 236
            L    AAE+G+YG+ VN ++P A  T +      E   T+D     ++F A        
Sbjct: 201 TLTLVGAAEMGRYGVTVNAIAPSA-RTRMTETVFAEMMATQD-----QDFDA-------- 246
Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGG 268
            +   +V+  V++L S EAR ++G    V+GG
Sbjct: 247 -MAPENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 119/271 (43%), Gaps = 25/271 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD-------- 67
           L GRVA ITG A G G S        GA +   D+   +   V  +     D        
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 68  ------TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
                       DV  +  +   V   +E+FG LD++V NAG+       + E    +++
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS--WGRVWELTDEQWD 130
Query: 122 KVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            V  +N+ G +  ++     MI     G+I+ + S AG     G   Y+ SKH +  L  
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190
Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--- 237
            +A ELG+YGIRVN + PY+V T +      E E   +      +FV     M       
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMI-----EPEAMMEIFARHPSFVHSFPPMPVQPNGF 245
Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGG 268
           +TA++VA+ V +LA D +  ++GT + VD G
Sbjct: 246 MTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 21/258 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L GR  L+TG   GIG  TV+  H  GA+V  ++  Q +L   V +  G EP    C  D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP---VC-VD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   E    A +  +   G +D++VNNA +  A      E     F++ F++N++ V   
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAV--ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  AR +I +   G I+++ S            Y  +K A+  L K +A ELG + IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  V T +  A   +  + +  +         N    G       V NA+LFL SD
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTML---------NRIPLGKFAEVEHVVNAILFLLSD 225
Query: 254 EARYISGTNLMVDGGFTS 271
            +   +G+ L V+GGF +
Sbjct: 226 RSGMTTGSTLPVEGGFWA 243

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 21/258 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L GR  L+TG   GIG  TV+  H  GA+V  ++  Q +L   V +  G EP    C  D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEP---VC-VD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   E    A +  +   G +D++VNNA +  A      E     F++ F++N++ V   
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAV--ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 135 MKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  AR +I +   G I+++ S            Y  +K A+  L K +A ELG + IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  V T +  A   +  + +  +         N    G       V NA+LFL SD
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTML---------NRIPLGKFAEVEHVVNAILFLLSD 225
Query: 254 EARYISGTNLMVDGGFTS 271
            +   +G+ L V+GGF +
Sbjct: 226 RSGMTTGSTLPVEGGFWA 243

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 27/267 (10%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----EPDTFF 70
           RL   +AL+TG  +GIG +        GA V   D+     Q+  + LGG    E     
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTL-----DIMVNNAGISGAPCPDIREADLSE--FEKV 123
            H     +     A    +E+          ++V+ AGI+     D     +SE  ++KV
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT----QDEFLLHMSEDDWDKV 119
Query: 124 FDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
             +N+KG F   + AA+ ++    +G+II+I S+ G +G +G   Y  SK  V+GL +  
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTA 179
Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           A ELG++GIR N V P  +AT       P  ++    +V     +    ++   E    D
Sbjct: 180 ARELGRHGIRCNSVLPGFIAT-------PMTQKVPQKVVDKITEMIPMGHLGDPE----D 228
Query: 243 VANAVLFLASDEARYISGTNLMVDGGF 269
           VA+ V FLAS+++ YI+GT++ V GG 
Sbjct: 229 VADVVAFLASEDSGYITGTSVEVTGGL 255

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 115/256 (44%), Gaps = 25/256 (9%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           G  AL+TG   GIG  TV+  H  GAKV  +     +L     +  G EP        V 
Sbjct: 7   GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEP--------VC 58
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            +     A +  +   G +D++VNNA +         E     F++ F +N++ VF   +
Sbjct: 59  VDLGDWDATEKALGGIGPVDLLVNNAAL--VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 116
Query: 137 HAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
             AR MI +   G+I+++ S+   +       Y+ +K A+  L K +A ELG + IRVN 
Sbjct: 117 MVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNS 176
Query: 196 VSPYAVAT--GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           V+P  V T  G  ++  PE  R        R F               DV N++LFL SD
Sbjct: 177 VNPTVVLTDMGKKVSADPEFARKLKERHPLRKFA-----------EVEDVVNSILFLLSD 225
Query: 254 EARYISGTNLMVDGGF 269
            +   SG  ++VD G+
Sbjct: 226 RSASTSGGGILVDAGY 241

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 21/265 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI---ADVQDNLGQQVCQSLGGEPDTFFCH 72
           L G+ AL+TG  +GIG    ++  + GA + +    D    L +     +          
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGV----KAVHHP 57
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
            D++    + +   L   +FG +DI+VNNAGI   AP   + +  L  ++K+  +N+  V
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAP---VEQFPLESWDKIIALNLSAV 114
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FHG + A   M  +  G II+I SV G +G  G  AY  +KH V+GL K V  E     +
Sbjct: 115 FHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-----LTANDVANA 246
             N + P     G  L  L +++  + A  G     A++  +   +     +T   +   
Sbjct: 175 TCNAICP-----GWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGEL 229
Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
           VLFL S+    + G    VDGG+ +
Sbjct: 230 VLFLCSEAGSQVRGAAWNVDGGWLA 254

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 14/255 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCD 74
           L G+VAL+TG + GIG++      + GA V       +  +++ ++L     +      D
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLD 84
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+ +E V + ++   +  G   I+VNNAGI+      +R  D  E+  V + N+  ++  
Sbjct: 85  VSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLL-VRMKD-DEWFDVVNTNLNSLYRL 142
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K   R M     G II+I SV GA+G  G   Y  +K  + G  + +A E+G   I VN
Sbjct: 143 SKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVN 202
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V+P  + T +    LPE +R  +A++G            G    A ++A  V FLASD 
Sbjct: 203 AVAPGFIDTDMT-RELPEAQR--EALLGQIPL--------GRLGQAEEIAKVVGFLASDG 251
Query: 255 ARYISGTNLMVDGGF 269
           A Y++G  + V+GG 
Sbjct: 252 AAYVTGATVPVNGGM 266

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 16/254 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+ A++ GG  G G +TVR   + GA+V +    ++   ++ +  G  P       D+  
Sbjct: 8   GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIAD 65
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++        +  G +D++  NAG+S   P   + EA    +++ F +N KG F  ++
Sbjct: 66  LNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS---YDRQFAVNTKGAFFTVQ 122
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               ++  +  G+I+   SVA   G  G   Y+ SK A++     +AAEL   GIRVN V
Sbjct: 123 RLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 180
Query: 197 SPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           SP  + T    +A + E ER E   +G  N      N      TA++VA AVLFLA  EA
Sbjct: 181 SPGFIDTPTKGVAGITEAERAEFKTLG-DNITPXKRNG-----TADEVARAVLFLAF-EA 233
Query: 256 RYISGTNLMVDGGF 269
            + +G  L VDGG 
Sbjct: 234 TFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 16/254 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+ A++ GG  G G +TVR   + GA+V +    ++   ++ +  G  P       D+  
Sbjct: 7   GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIAD 64
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++        +  G +D++  NAG+S   P   + EA    +++ F +N KG F  ++
Sbjct: 65  LNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS---YDRQFAVNTKGAFFTVQ 121
Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               ++  +  G+I+   SVA   G  G   Y+ SK A++     +AAEL   GIRVN V
Sbjct: 122 RLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSV 179
Query: 197 SPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           SP  + T    +A + E ER E   +G  N      N      TA++VA AVLFLA  EA
Sbjct: 180 SPGFIDTPTKGVAGITEAERAEFKTLG-DNITPXKRNG-----TADEVARAVLFLAF-EA 232
Query: 256 RYISGTNLMVDGGF 269
            + +G  L VDGG 
Sbjct: 233 TFTTGAKLAVDGGL 246

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 111/246 (45%), Gaps = 21/246 (8%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPD-TFFCHCD 74
           G+VAL+TG A GIG +        GAKV + D     G Q   +L    EP  T F  CD
Sbjct: 7   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 66
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V  ++ +       V+ FG LDI+VNNAG++              +EK   IN+  V  G
Sbjct: 67  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE----------KNWEKTLQINLVSVISG 116
Query: 135 MKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN--VAAELGKY 189
                  M  Q     G II++ S+AG +       Y  SKH ++G  ++  +AA L   
Sbjct: 117 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS 176
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+R+N + P  V T  A+    E+E      + +++ +       G  L    +AN ++ 
Sbjct: 177 GVRLNAICPGFVNT--AILESIEKEENMGQYIEYKDHIKDMIKYYGI-LDPPLIANGLIT 233
Query: 250 LASDEA 255
           L  D+A
Sbjct: 234 LIEDDA 239

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 121/266 (45%), Gaps = 40/266 (15%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L GR AL+TG  TG+G++        GA+V C A    +    +    GG          
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDF- 65
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF-----EKVFDINVK 129
                D  +A D   +     DI+VNNAGI       IR AD  EF     ++V D+N+K
Sbjct: 66  ----ADPLAAKDSFTD--AGFDILVNNAGI-------IRRADSVEFSELDWDEVMDVNLK 112
Query: 130 GVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +F   +  A+ ++ + + G +++I S+    GG+   +YT +KH V GL K +A E   
Sbjct: 113 ALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAA 172
Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-----QGTELTANDV 243
            GI VN ++P  +          E   TE      R   ARN  +      G    + D+
Sbjct: 173 KGINVNAIAPGYI----------ETNNTE----ALRADAARNKAILERIPAGRWGHSEDI 218
Query: 244 ANAVLFLASDEARYISGTNLMVDGGF 269
           A A +FL+S  A Y+ G  L VDGG+
Sbjct: 219 AGAAVFLSSAAADYVHGAILNVDGGW 244

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L G VALITGGA+G+G + V  F   GA+V + D      +++  + GG  +      D
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGG--NAVGVVGD 59
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADL-SEFEKVFDINVKGV 131
           V   +D   A +  +  FG +D ++ NAGI        D+ E  + + F+ +F +NVKG 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            H +K     ++  ++G+++   S AG     G   YT +KHAV+GL + +A EL  + +
Sbjct: 120 IHAVKACLPALV-SSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-V 177
Query: 192 RVNCVSPYAVATGL 205
           RVN V+P  + T L
Sbjct: 178 RVNGVAPGGMNTDL 191

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI---ADVQDNLGQQVCQSLGGEPDTFFCH 72
           L G+VA +TG + GIG +    + + GA V I   +   D   + + ++ G     +   
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAY--K 89
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           C+++  + V   +    + FGT+D+ V NAG++    P+I   +   + K+  +++ GV+
Sbjct: 90  CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVY 149
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH---AYTGSKHAVLGLNKNVAAELGKY 189
           +   +  +I     KG++I   S++G I  + P     Y  +K A   L K++A E   +
Sbjct: 150 YCSHNIGKIFKKNGKGSLIITSSISGKIVNI-PQLQAPYNTAKAACTHLAKSLAIEWAPF 208
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT-------AND 242
             RVN +SP  + T +                   +F +++   +  +LT         +
Sbjct: 209 A-RVNTISPGYIDTDIT------------------DFASKDMKAKWWQLTPLGREGLTQE 249
Query: 243 VANAVLFLASDEARYISGTNLMVDGGFT 270
           +    L+LAS+ + + +G+++++DGG+T
Sbjct: 250 LVGGYLYLASNASTFTTGSDVVIDGGYT 277

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 25/265 (9%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
           +++  G  A+++GGA G+GE+TVR  H  G  V IAD+    G+ +   LG   +  F  
Sbjct: 25  IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAE--FVS 82
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE----ADLSEFEKVFDINV 128
            +VT E+ V +A++    + G L   V   G  G     ++     AD+  F K  D+ +
Sbjct: 83  TNVTSEDSVLAAIE-AANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYL 141
Query: 129 KGVFHGMKH-AARIMIPQT-----KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
            G ++  +  AA I   +      +G ++   S+AG  G +G  AY  +K  V+GL    
Sbjct: 142 NGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAA 201
Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
           A +L   GIRVN ++P  + T +       E   E+A+  F    A N        T ++
Sbjct: 202 ARDLSSAGIRVNTIAPGTMKTPIM------ESVGEEALAKF----AANIPFPKRLGTPDE 251
Query: 243 VANAVLFLASDEARYISGTNLMVDG 267
            A+A  FL ++   YI+G  + +DG
Sbjct: 252 FADAAAFLLTNG--YINGEVMRLDG 274

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 122/276 (44%), Gaps = 29/276 (10%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIAD-------------VQDNLGQQVCQSLGG 64
           G+ ALITGGA G+G S      + GA + I D               D+L + V      
Sbjct: 10  GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT 69
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKV 123
                    DV     + S V    +  G +DI + NAGIS  A  P++  A   ++++V
Sbjct: 70  GRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESA---QWDEV 126
Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
              N+ G F+ +   A  MI +  G I+++ S+ G        +Y  SK  V+GL K  A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHL------PEEERT--EDAMVGFRNFVARNANMQG 235
            +L  YGI VN V+P  + T +           P+ E+   +D    F +   + A    
Sbjct: 187 HDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF-- 244
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
             L   +V  AVLFL  + + +I+GT L +D G T+
Sbjct: 245 --LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 25/259 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGEPDTFFC 71
           L G+ A +TGG+ GIG +  +     GA V +  V      Q      +  GG       
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGR--AVAI 86
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
             D    E +  A+  TVE  G LDI+VN+AGI   AP   + E  +++F++V  +N + 
Sbjct: 87  RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP---LEETTVADFDEVXAVNFRA 143
Query: 131 VFHGMKHAARIMIPQTKGTIISICS-VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            F  ++ A+R +     G II+I S +A  +   G   Y+ SK A+ GL K +A +LG  
Sbjct: 144 PFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPR 201
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GI VN V P +  T    A     E   + +              G+     D+A  V +
Sbjct: 202 GITVNIVHPGSTDTDXNPADGDHAEAQRERIA------------TGSYGEPQDIAGLVAW 249
Query: 250 LASDEARYISGTNLMVDGG 268
           LA  + ++++G +L +DGG
Sbjct: 250 LAGPQGKFVTGASLTIDGG 268

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 126/269 (46%), Gaps = 33/269 (12%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDT 68
           Q  + +V LITGG+ GIG ++  L  + G  V +     +   D + +Q+ ++ GG+   
Sbjct: 21  QSXLSKVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREA-GGQ--A 77
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                DV KE +V +  +    + G L  +VNNAG+       +    L   ++ F+INV
Sbjct: 78  LAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVD-QTTRVDGITLERLQRXFEINV 136
Query: 129 KGVFHGMKHAARIMIPQ---TKGTIISICSVAGAIGGLGPHA-YTGSKHAV----LGLNK 180
            G F   + A +    +   + G+I+++ S A  +G  G +  Y  +K A+    LGL K
Sbjct: 137 FGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAK 196
Query: 181 NVAAELGKYGIRVNCVSPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
            VA E    GIRVN V P  + T + A   LP   R           VA     Q    T
Sbjct: 197 EVATE----GIRVNAVRPGIIETDIHASGGLPNRARD----------VAPQVPXQRAG-T 241
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
           A +VA A+++L  D+A Y +G  L V GG
Sbjct: 242 AREVAEAIVWLLGDQASYTTGALLDVTGG 270

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           QRL  ++A+ITG  +GIG +  + F   GA+V I   + ++       +GG         
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG------GAV 78
Query: 74  DVTKEEDVCSAVDLTVEKF----GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
            +  +    + +D   EK     G +D++  NAG  G+  P + E    +++  FD NVK
Sbjct: 79  GIQADSANLAELDRLYEKVKAEAGRIDVLFVNAG-GGSXLP-LGEVTEEQYDDTFDRNVK 136
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           GV   ++ A  ++   +  +++   S AG+ G      Y  SK A+    +N   +L   
Sbjct: 137 GVLFTVQKALPLLARGS--SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDR 194
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIR+N +SP    T   L  L  ++  +    G  N +A      G    A +VA A LF
Sbjct: 195 GIRINTLSPGPTET-TGLVELAGKDPVQQQ--GLLNALAAQVPX-GRVGRAEEVAAAALF 250
Query: 250 LASDEARYISGTNLMVDGGFTSV 272
           LASD++ +++G  L VDGG   V
Sbjct: 251 LASDDSSFVTGAELFVDGGSAQV 273

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 30/256 (11%)
Query: 16  LVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQ--SLG-GEPDTFF 70
           L G+V L+T  A TGIG +T R     GA V I+D  +  LG+   Q   LG G  +   
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVK 129
           C  DVT  E V + +  TVEK G LD++VNNAG+ G  P  D+ +    E+++V ++ + 
Sbjct: 80  C--DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTD---EEWDRVLNVTLT 134
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA---YTGSKHAVLGLNKNVAAEL 186
            V    + A R       G +  I + A  +G    H+   Y  +K  V+ L +  A E 
Sbjct: 135 SVMRATRAALRYFRGVDHGGV--IVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEA 192
Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVA 244
            ++G+R+N VSP       ++A     E+T  +       + R A+ +  G      +VA
Sbjct: 193 VEFGVRINAVSP-------SIARHKFLEKTSSS-----ELLDRLASDEAFGRAAEPWEVA 240
Query: 245 NAVLFLASDEARYISG 260
             + FLASD + Y++G
Sbjct: 241 ATIAFLASDYSSYMTG 256

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 114/253 (45%), Gaps = 18/253 (7%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +VAL+TG + GIG          GA V          ++   S   +   F     V   
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSX--KEKGFKARGLVLNI 63
Query: 79  EDVCSAVDLTVEKFG---TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            D+ S  +   E       +DI+VNNAGI+          D  E++ V + N+  +F   
Sbjct: 64  SDIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSED--EWQSVINTNLSSIFRXS 121
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R    +  G IISI SV G+ G  G   Y  +K  V+G +K++A E+    I VN 
Sbjct: 122 KECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNV 181
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P  +AT      L +E+++         F+A      G      D+A AV FLAS+EA
Sbjct: 182 VAPGFIATD-XTDKLTDEQKS---------FIATKI-PSGQIGEPKDIAAAVAFLASEEA 230
Query: 256 RYISGTNLMVDGG 268
           +YI+G  L V+GG
Sbjct: 231 KYITGQTLHVNGG 243

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 21/256 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV-----CQSLGGEPDTFFCHC 73
           R+A +TGG  GIG S  +  HK G +V +A    N  ++V      ++LG   D +    
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRV-VAGCGPNSPRRVKWLEDQKALG--FDFYASEG 70
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +V   +    A D    + G +D++VNNAGI+       R+    +++ V D N+  +F+
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVV--FRKMTREDWQAVIDTNLTSLFN 128
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K     M+ +  G II+I SV G  G  G   Y+ +K  + G   ++A E+   G+ V
Sbjct: 129 VTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTV 188
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N VSP  + T +  A  P+      A +  R              + +++ + V +LAS+
Sbjct: 189 NTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRL-----------GSPDEIGSIVAWLASE 237
Query: 254 EARYISGTNLMVDGGF 269
           E+ + +G +  ++GG 
Sbjct: 238 ESGFSTGADFSLNGGL 253

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGGEPDTF 69
           ++L G+  LITGG +GIG +    F K GA + IA + +    N  +Q  +  G +    
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK--CV 100
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D++ E+     V  TV + G+L+I+VNN      P   +      + EK F IN+ 
Sbjct: 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA-QQYPQQGLEYITAEQLEKTFRINIF 159
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             FH  K A   +  +    II+  S+    G      Y+ +K A++   ++++  L + 
Sbjct: 160 SYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQK 217
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  + T L  +   E++ ++     F + V      Q  EL     A A ++
Sbjct: 218 GIRVNGVAPGPIWTPLIPSSFDEKKVSQ-----FGSNVPXQRPGQPYEL-----APAYVY 267
Query: 250 LASDEARYISGTNLMVDGG 268
           LAS ++ Y++G  + V+GG
Sbjct: 268 LASSDSSYVTGQXIHVNGG 286

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 28/260 (10%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT---FFCHC-D 74
           RVA +TGG  G+G +  R  H  G  V ++  + N    V   L  E D    F  +  D
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN--DHVSTWLMHERDAGRDFKAYAVD 83
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVK 129
           V   E      +  +  FG +D+++NNAGI+       R+A        +++ V   ++ 
Sbjct: 84  VADFESCERCAEKVLADFGKVDVLINNAGIT-------RDATFMKMTKGDWDAVMRTDLD 136
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            +F+  K     M+ +  G I++I SV G+ G  G   Y  +K  + G  K +A E  K 
Sbjct: 137 AMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKR 196
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GI VN VSP  +AT +  A +P++    +A +  +  V R           ++VA  + F
Sbjct: 197 GITVNTVSPGYLATAMVEA-VPQD--VLEAKILPQIPVGRLGR-------PDEVAALIAF 246
Query: 250 LASDEARYISGTNLMVDGGF 269
           L SD+A +++G +L ++GG 
Sbjct: 247 LCSDDAGFVTGADLAINGGM 266

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 20/271 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDT-----F 69
           L G+VA++TGGATGIG++ V+   + G+ V IA  + + L     +     P T      
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
              C++  EE+V + V  T++ FG ++ +VNN G  G             +  V + N+ 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG--GQFLSPAEHISSKGWHAVLETNLT 133
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G F+  K      + +  G+I++I     A   L  H+   ++  V  L K++A E    
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHS-GAARAGVYNLTKSLALEWACS 192
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERT--EDAMVGFRNFVARNANMQGTELTANDVANAV 247
           GIR+NCV+P  + +  A+ +     ++  E +   F+   A+   +        +V++ V
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGS---FQKIPAKRIGV------PEEVSSVV 243
Query: 248 LFLASDEARYISGTNLMVDGGFTSVNHSLRV 278
            FL S  A +I+G ++ VDGG +   HS  V
Sbjct: 244 CFLLSPAASFITGQSVDVDGGRSLYTHSYEV 274

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 8/253 (3%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           VALITG  +GIG +T       G  V  +   +  + +   + +G          DV+ E
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
               +AV   V KFG LDI+V NAGI+G   P I +    E+++   +N++G F  +   
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAP-IDDLKPFEWDETIAVNLRGTFLTLHLT 148
Query: 139 ARIMIPQTKGTIISICSVAGA--IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
              +  +  G I+ + S+ G       G  AYT +K A + + + +A ELGK+ IRVN V
Sbjct: 149 VPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAV 208
Query: 197 SPYAVATGLAL-AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
            P A+ T ++    L  EE T   +   +  V       G    + DVA  + FL S+ A
Sbjct: 209 CPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPG---RSEDVAELIRFLVSERA 265
Query: 256 RYISGTNLMVDGG 268
           R+++G+ + +DGG
Sbjct: 266 RHVTGSPVWIDGG 278

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGGEPDTF 69
           ++L G+  LITGG +GIG +    F K GA + IA + +    N  +Q  +  G +    
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK--CV 100
Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D++ E+     V  TV + G+L+I+VNN      P   +      + EK F IN+ 
Sbjct: 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA-QQYPQQGLEYITAEQLEKTFRINIF 159
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             FH  K A   +  +    II+  S+    G      Y+ +K A++   ++++  L + 
Sbjct: 160 SYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQK 217
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  + T L  +   E++ ++     F + V      Q  EL     A A ++
Sbjct: 218 GIRVNGVAPGPIWTPLIPSSFDEKKVSQ-----FGSNVPMQRPGQPYEL-----APAYVY 267
Query: 250 LASDEARYISGTNLMVDGG 268
           LAS ++ Y++G  + V+GG
Sbjct: 268 LASSDSSYVTGQMIHVNGG 286

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 97/194 (50%), Gaps = 23/194 (11%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI--------ADVQDNLGQQVCQSLGGE 65
            +L G   LITGGA+G+G + V  F   GAKV +        A+++ + G  V   +G  
Sbjct: 1   MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVG-- 58
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADL-SEFEK 122
                   DV   ED   A    V +FG +D ++ NAGI        D+ E  L + F++
Sbjct: 59  --------DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDE 110
Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           VF INVKG  H +K     ++  ++G +I   S AG     G   YT +KHA++GL + +
Sbjct: 111 VFHINVKGYIHAVKACLPALV-ASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVREL 169
Query: 183 AAELGKYGIRVNCV 196
           A EL  Y +RVN V
Sbjct: 170 AFELAPY-VRVNGV 182

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 117/262 (44%), Gaps = 21/262 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKV--CIADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           + A +TG ++GIG +  R     G  V  C  D + N+   V        D     CDVT
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAK-NVSAAVDGLRAAGHDVDGSSCDVT 83
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             ++V +AV   VE+FG + I+VN+AG +G    +  + D + +  V D N+ GVF   +
Sbjct: 84  STDEVHAAVAAAVERFGPIGILVNSAGRNGGG--ETADLDDALWADVLDTNLTGVFRVTR 141
Query: 137 HAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              R   M     G I++I S  G  G +    YT SKH V+G  K+V  EL K GI VN
Sbjct: 142 EVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVN 201
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR------NANMQ-GTELTANDVANAV 247
            V P  V T       P  ER  +          +      NA +  G   T  +VA  V
Sbjct: 202 AVCPGYVET-------PMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLV 254
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L +D A  I+   L V GG 
Sbjct: 255 GYLVTDAAASITAQALNVCGGL 276

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC-DVTK 77
           +V LITG + GIGE   R     GAK+ +   +    + +   +     T      DVT 
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
              V +     V+ +G +D++VNNAG+   P   +    + E+E++ D+N+KGV  G+  
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVM--PLSPLAAVKVDEWERMIDVNIKGVLWGIGA 122
Query: 138 AARIMIPQTKGTIISICSVAGAIGGLG--PHA--YTGSKHAVLGLNKNVAAELGKYGIRV 193
              IM  Q  G II+I    G+IG L   P A  Y  +K AV  ++  +  E     IRV
Sbjct: 123 VLPIMEAQRSGQIINI----GSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRV 176
Query: 194 NCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANM 233
            CV+P  V + LA  + H    E T  AM  +R    + A++
Sbjct: 177 TCVNPGVVESELAGTITH----EETMAAMDTYRAIALQPADI 214

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGWVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 44/270 (16%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV------------CIADVQDNLGQQVCQSLG 63
           L GR  ++TGG  GIG     +F + GA V            C+AD+ D LG        
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL-DQLGSG------ 60
Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS--EFE 121
                     DV+      +     VE+FG +D++  NAG+     PD   A ++  +  
Sbjct: 61  ---KVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV----FPDAPLATMTPEQLN 113
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNK 180
            +F +NV G F+ ++     +I    G ++   S+ G I G  G   Y  +K A LG  +
Sbjct: 114 GIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMR 173
Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM--QGTEL 238
             A EL  + I VN +             +P    TE  +     ++A  A     G   
Sbjct: 174 TAAIELAPHKITVNAI-------------MPGNIMTEGLLENGEEYIASMARSIPAGALG 220
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
           T  D+ +   FLA+ EA YI+G  + VDGG
Sbjct: 221 TPEDIGHLAAFLATKEAGYITGQAIAVDGG 250

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGFVETPMAASVREHFSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 35/264 (13%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           V L+TGG+ GIG +  RL  + G +V +      +  D +   + +S GGE        D
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGE--AVAIPGD 84
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF-- 132
           V    D+ +       +FG LD +VNNAGI   P   + E  +   E+   +NV G    
Sbjct: 85  VGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYP-QRVDEXSVERIERXLRVNVTGSILC 143
Query: 133 --HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAV----LGLNKNVAAE 185
               ++  +R+   Q  G I+++ S A  +G    +  Y  SK A+    +GL + VAAE
Sbjct: 144 AAEAVRRXSRLYSGQ-GGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202
Query: 186 LGKYGIRVNCVSPYAVATGL-ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
               GIRVN V P  + T L A   LP+  R     V  +                 +VA
Sbjct: 203 ----GIRVNAVRPGIIETDLHASGGLPDRAREXAPSVPXQR-----------AGXPEEVA 247
Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           +A+L+L S  A Y++G+ L V GG
Sbjct: 248 DAILYLLSPSASYVTGSILNVSGG 271

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 8   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 65
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 66  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGAT----AELADELWLDVVETNLTGVFRV 121
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 122 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 181
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 182 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 236
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 237 AYLIGPGAAAVTAQALNVCGGL 258

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 81
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 82  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 137
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 198 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 252
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 253 AYLIGPGAAAVTAQALNVCGGL 274

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 107/253 (42%), Gaps = 15/253 (5%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVT 76
           R ALIT G  G+G+         G  V +    D    +  +      E    F   DVT
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVT 67
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
           K+ED+   V+  +  FG +D ++NNAG        + + +  E+ ++   N+  VFH +K
Sbjct: 68  KKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLK 127
Query: 137 HAARIMIPQTKGTIIS--ICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
               +M  Q  G II+        A G +   A+  +K  ++ L K VA E  +YGI  N
Sbjct: 128 LVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITAN 187
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V P  +   +  A + E           R     N  + G   T  D+A  + FL  D+
Sbjct: 188 MVCPGDIIGEMKEATIQEA----------RQLKEHNTPI-GRSGTGEDIARTISFLCEDD 236
Query: 255 ARYISGTNLMVDG 267
           +  I+GT + V G
Sbjct: 237 SDMITGTIIEVTG 249

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 81
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 82  SVPEIEALVAAVVERYGPVDVLVNNAGRLGGGAT----AELADELWLDVVETNLTGVFRV 137
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 198 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 252
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 253 AYLIGPGAAAVTAQALNVCGGL 274

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 23/262 (8%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQV--CQSLGGEPDTFFCHCDVT 76
           VAL+TG  +GIG    R   K G +V + A  ++ L   +   +  G E D     CDV 
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR--TCDVR 85
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKGVFHG 134
              ++ + V   VE++G +D++VNNAG  G        A+L++  +  V + N+ GVF  
Sbjct: 86  SVPEIEALVAAVVERYGPVDVLVNNAGRLGGGAT----AELADELWLDVVETNLTGVFRV 141
Query: 135 MKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            K   +   M+ +  G I++I S  G  G +    Y+ SKH V+G  K +  EL + GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 193 VNCVSPYAVATGLALA---HLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           VN V P  V T +A +   H  +  E  TE+A   F    AR     G  +  ++VA  V
Sbjct: 202 VNAVCPGFVETPMAASVREHYSDIWEVSTEEA---FDRITARVP--IGRYVQPSEVAEMV 256
Query: 248 LFLASDEARYISGTNLMVDGGF 269
            +L    A  ++   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVC--QSLGGEPDT 68
           +++   GR A +TGGA G+G   VR     G KV IAD+ QD++ + +   ++ G  P+ 
Sbjct: 2   SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEV 61
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                DV   E    A D    +FG + I+ NNAG++      I E+   +++ +  +N+
Sbjct: 62  MGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVN--LFQPIEESSYDDWDWLLGVNL 119
Query: 129 KGVFHGMKHAARIMIPQTK------GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
            GV +G+      M+ + K      G +++  S+A  +    P  Y  +K AV GL++++
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESL 179
Query: 183 AAELGKYGIRVNCVSP 198
              L KY I V+ + P
Sbjct: 180 HYSLLKYEIGVSVLCP 195

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 112/257 (43%), Gaps = 20/257 (7%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH----C 73
           G+   +TG   GIG +T   F + GAKV   D          Q+   E   F        
Sbjct: 7   GKNVWVTGAGKGIGYATALAFVEAGAKVTGFD----------QAFTQEQYPFATEVMDVA 56
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D  +   VC  +    E+   LD +VN AGI      D  +    ++++ F +NV G F+
Sbjct: 57  DAAQVAQVCQRLLAETER---LDALVNAAGILRMGATD--QLSKEDWQQTFAVNVGGAFN 111
Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +        Q  G I+++ S A     +G  AY  SK A+  L  +V  EL   G+R 
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N VSP +  T +       ++  E  + GF         + G      ++AN +LFLASD
Sbjct: 172 NVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPL-GKIARPQEIANTILFLASD 230
Query: 254 EARYISGTNLMVDGGFT 270
            A +I+  +++VDGG T
Sbjct: 231 LASHITLQDIVVDGGST 247

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 116/260 (44%), Gaps = 31/260 (11%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGG+ GIG +        G +V IA       ++  QSLG  P       D+ K+
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP---EEAAQSLGAVP----LPTDLEKD 55
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS----EFEKVFDINVKGVFHG 134
            D    V   +E  G L ++V+ A +      ++R+  L     E+ +V  +++   F  
Sbjct: 56  -DPKGLVKRALEALGGLHVLVHAAAV------NVRKPALELSYEEWRRVLYLHLDVAFLL 108
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGP---HAYTGSKHAVLGLNKNVAAELGKYGI 191
            + AA  M     G ++ I SV     G GP    AYT +K A+LGL + +A E  + GI
Sbjct: 109 AQAAAPHMAEAGWGRVLFIGSVTTFTAG-GPVPIPAYTTAKTALLGLTRALAKEWARLGI 167
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN + P  V T      LP  +  E     +    AR     G      ++A     L 
Sbjct: 168 RVNLLCPGYVETEFT---LPLRQNPEL----YEPITARIP--MGRWARPEEIARVAAVLC 218
Query: 252 SDEARYISGTNLMVDGGFTS 271
            DEA Y++G  + VDGGF +
Sbjct: 219 GDEAEYLTGQAVAVDGGFLA 238

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 28/268 (10%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCH 72
           RL G+VAL+TG   GIG +      + GAKV +  A+   +  + V +      D     
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGV 131
            D+ +  ++    D  V  FG LDI V+N+G+ S     D+ E    EF++VF +N +G 
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTE---EEFDRVFSLNTRGQ 131
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYG 190
           F   + A R +     G I+   S       +  H+ Y+GSK AV    +  + + G   
Sbjct: 132 FFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKK 189
Query: 191 IRVNCVSPYAVATGL----ALAHLPE------EERTEDAMVGFRNFVARNANMQGTELTA 240
           I VN V+P    T +    +  ++P       E+R +  M    + + RN   Q      
Sbjct: 190 ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQ--MAAHASPLHRNGWPQ------ 241
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            DVAN V FL S E  +++G  L +DGG
Sbjct: 242 -DVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 28/242 (11%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-----PDTFF 70
           L G+VALITG ++GIGE+T     +  A    A        +  ++LG E          
Sbjct: 5   LQGKVALITGASSGIGEATA----RALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHV 60
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
              DV   + V +AV  TVE  G LDI+VNNAGI    P  D   AD +++ ++ D N+ 
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVED---ADTTDWTRMIDTNLL 117
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G+ + M  AA   + ++KGT++ + S+AG +       Y  +K  V   ++ +  E+ + 
Sbjct: 118 GLMY-MTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTER 176
Query: 190 GIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           G+RV  + P    T L   + H   +E  E  +   R            +L A D+A AV
Sbjct: 177 GVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIR------------KLQAQDIAEAV 224
Query: 248 LF 249
            +
Sbjct: 225 RY 226

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL--------GQQVCQSLGGEP 66
           R+  +V L+TGGA G G S      + GA + + D+  ++          +  +  G E 
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 67  D-----TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
           +      +    DV     V   +   V +FG LD++V NAGI    CP      +  F 
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI----CPLGAHLPVQAFA 122
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-----------YTG 170
             FD++  GV + + HAA   +  +  +II+  SVAG I    P             Y+ 
Sbjct: 123 DAFDVDFVGVINTV-HAALPYL-TSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSY 180
Query: 171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP---------EEERTEDAMV 221
           +K  V      +AA+L    IR N + P  V T + L   P         E     DA++
Sbjct: 181 AKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDM-LNSAPMYRQFRPDLEAPSRADALL 239
Query: 222 GFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
            F    A    M    + A+D++NAV FLASDE+RY++G    VD G
Sbjct: 240 AFPAMQA----MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDT 68
           P    L G+VAL+TG   GIG        + G KV +  A+  ++  + V        D 
Sbjct: 22  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA 81
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                +V   ED+    +  V+ FG LDI+ +N+G+       +++    EF++VF IN 
Sbjct: 82  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTINT 139
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELG 187
           +G F   + A + +  +  G +I + S+ G    +  HA Y+GSK A+    + +A ++ 
Sbjct: 140 RGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 197
Query: 188 KYGIRVNCVSPYAVATGLALA----HLPEEERTEDAMVGFRNFVARNANMQGTELT---- 239
              I VN V+P  + T +  A    ++P  E   +        V   A +Q + L     
Sbjct: 198 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSN------EEVDEYAAVQWSPLRRVGL 251
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             D+A  V FLAS++  +++G  + +DGG
Sbjct: 252 PIDIARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDT 68
           P    L G+VAL+TG   GIG        + G KV +  A+  ++  + V        D 
Sbjct: 22  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA 81
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                +V   ED+    +  V+ FG LDI+ +N+G+       +++    EF++VF IN 
Sbjct: 82  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTINT 139
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELG 187
           +G F   + A + +  +  G +I + S+ G    +  HA Y+GSK A+    + +A ++ 
Sbjct: 140 RGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 197
Query: 188 KYGIRVNCVSPYAVATGLALA----HLPEEERTEDAMVGFRNFVARNANMQGTELT---- 239
              I VN V+P  + T +  A    ++P  E   +        V   A +Q + L     
Sbjct: 198 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSN------EEVDEYAAVQWSPLRRVGL 251
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             D+A  V FLAS++  +++G  + +DGG
Sbjct: 252 PIDIARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
           L G+ AL+TG A G+G +        GA+V + D++  L  +   +L  +  D      D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT E  + +A      +   +DI++NNAGI       + E +L  ++KV D N+   F  
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGIQ--YRKPMVELELENWQKVIDTNLTSAFLV 124
Query: 135 MKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            + AA+ MI +  G  II+I S+           YT +K  +  L  ++AAE  ++ I+ 
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184
Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N + P  + T +  A + +++        F ++V  +   Q        +  A+ FL+S 
Sbjct: 185 NAIGPGYILTDMNTALIEDKQ--------FDSWVKSSTPSQRWGRPEELIGTAI-FLSSK 235
Query: 254 EARYISGTNLMVDGGFTSV 272
            + YI+G  + VDGG+ +V
Sbjct: 236 ASDYINGQIIYVDGGWLAV 254

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 68/277 (24%)
Query: 22  LITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           L+TGG+ GIG++ V L  ++     I  D+Q        QS   E +  F   D+TK++D
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQ--------QSFSAE-NLKFIKADLTKQQD 58
Query: 81  VCSAVDLTVEKFGTLDIMVNNAGI--SGAPCPDIREADLSEFEKVFDINV-------KGV 131
           + + +D+   K  + D +  NAGI   G+    I + D+   +KV D+NV       KG+
Sbjct: 59  ITNVLDII--KNVSFDGIFLNAGILIKGS----IFDIDIESIKKVLDLNVWSSIYFIKGL 112
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            + +K  A I+   +       C +A         AYT SK A+    K++A +L KY I
Sbjct: 113 ENNLKVGASIVFNGSDQ-----CFIAKP----NSFAYTLSKGAIAQXTKSLALDLAKYQI 163
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL------------- 238
           RVN V P  V T L                 +RN + + AN  G                
Sbjct: 164 RVNTVCPGTVDTDL-----------------YRNLIQKYANNVGISFDEAQKQEEKEFPL 206
Query: 239 ----TANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
                  ++A  V+FL SD++++ +G  + +DGG+T+
Sbjct: 207 NRIAQPQEIAELVIFLLSDKSKFXTGGLIPIDGGYTA 243

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + + G + LITG   GIG  T   F K  +K+ + D+  +  ++    C+ LG +  TF 
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
             C  +  ED+ S+      + G + I+VNNAG+      D+      + EK F++NV  
Sbjct: 87  VDC--SNREDIYSSAKKVKAEIGDVSILVNNAGV--VYTSDLFATQDPQIEKTFEVNVLA 142
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY- 189
            F   K     M     G I+++ S AG +      AY  SK A +G +K +  EL    
Sbjct: 143 HFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQ 202
Query: 190 --GIRVNCVSPYAVATGL 205
             G++  C+ P  V TG 
Sbjct: 203 ITGVKTTCLCPNFVNTGF 220

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVT 76
           GR A++TGGA+GIG +T   F + GA++ ++DV     +Q    L G+  D     CDV 
Sbjct: 31  GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR 90
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGM 135
             +++    D      G +D++ +NAGI  A P   +   D   +  V DI++ G  H +
Sbjct: 91  HLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDD---WRWVIDIDLWGSIHAV 147
Query: 136 K-HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +    R++   T G I    S AG +   G   Y  +K+ V+GL + +A E+   GI V+
Sbjct: 148 EAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVS 207
Query: 195 CVSPYAVATGL 205
            + P  V T L
Sbjct: 208 VLCPMVVETKL 218

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 122/268 (45%), Gaps = 28/268 (10%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCH 72
           RL G+VAL+TG   GIG +      + GAKV +  A+   +  + V +      D     
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGV 131
            D+ +  ++    D  V  FG LDI V+N+G+ S     D+ E    EF++VF +N +G 
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTE---EEFDRVFSLNTRGQ 131
Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYG 190
           F   + A R +     G I+   S       +  H+ ++GSK AV    +  + + G   
Sbjct: 132 FFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKK 189
Query: 191 IRVNCVSPYAVATGL----ALAHLPE------EERTEDAMVGFRNFVARNANMQGTELTA 240
           I VN V+P    T +    +  ++P       E+R +  M    + + RN   Q      
Sbjct: 190 ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQ--MAAHASPLHRNGWPQ------ 241
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            DVAN V FL S E  +++G  L +DGG
Sbjct: 242 -DVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+T E++   AVD      G L  +V+ AG S    P I + D   + +  D+NV G  
Sbjct: 70  TDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP-ITQVDSEAWRRTVDLNVNGTM 128
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           + +KHAAR M+    G+ + I S+A +       AY  +K AV  L +  A ELG   +R
Sbjct: 129 YVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVR 188
Query: 193 VNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           VN + P  + T L  A     E + D AM      + R   ++       DVAN  +FL 
Sbjct: 189 VNSIRPGLIRTDLVAAITESAELSSDYAMC---TPLPRQGEVE-------DVANMAMFLL 238
Query: 252 SDEARYISGTNLMVDGG 268
           SD A +++G  + VDGG
Sbjct: 239 SDAASFVTGQVINVDGG 255

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 18/262 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFF 70
           L G  AL+TGG+ GIG   V      GA V        ++ D L Q   +    E     
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV-- 64
Query: 71  CHCDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
             CD++   +    ++     F G L+I+VNNAGI      + ++  + ++  +  IN +
Sbjct: 65  --CDLSSRSERQELMNTVANHFHGKLNILVNNAGI--VIYKEAKDYTVEDYSLIMSINFE 120
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +H    A   +    +G ++ I SV+GA+       Y  +K A+  L + +A E  K 
Sbjct: 121 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 180
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            IRVN V P  +AT L    + + E+ E+        + R A  +  E    ++A  V F
Sbjct: 181 NIRVNGVGPGVIATSLVEMTIQDPEQKEN----LNKLIDRCALRRMGE--PKELAAMVAF 234
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           L    A Y++G  + VDGG  +
Sbjct: 235 LCFPAASYVTGQIIYVDGGLMA 256

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 122/298 (40%), Gaps = 68/298 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 9   VALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQADLS 68
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD 111
           +       ++ G  P T F  C         + VD     +G  D++VNNA  S  P P 
Sbjct: 69  NVATASFSETDGSVPVTLFSRCS--------ALVDACYMHWGRCDVLVNNAS-SFYPTPL 119
Query: 112 IRE---------ADLSEFE----KVFDINVKGVFHGMKHAARIMI---PQTKGTIISICS 155
           +R+          D    E     +F  N    +  +K  A+ +     + +GT  SI +
Sbjct: 120 LRKDAGEGGSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVN 179
Query: 156 VAGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE 212
           +  A+     LG   YT +K A+ GL ++ A EL    IRVN VSP        L+ LP+
Sbjct: 180 MVDAMTSQPLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSP-------GLSVLPD 232
Query: 213 EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                D     +    R   +     +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 233 -----DMPFSVQEDYRRKVPLYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYS 285

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 18/262 (6%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFF 70
           L G  AL+TGG+ GIG   V      GA V        ++ D L Q   +    E     
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV-- 63
Query: 71  CHCDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
             CD++   +    ++     F G L+I+VNNAGI      + ++  + ++  +  IN +
Sbjct: 64  --CDLSSRSERQELMNTVANHFHGKLNILVNNAGI--VIYKEAKDYTVEDYSLIMSINFE 119
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +H    A   +    +G ++ I SV+GA+       Y  +K A+  L + +A E  K 
Sbjct: 120 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 179
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            IRVN V P  +AT L    + + E+ E+        + R A  +  E    ++A  V F
Sbjct: 180 NIRVNGVGPGVIATSLVEMTIQDPEQKEN----LNKLIDRCALRRMGE--PKELAAMVAF 233
Query: 250 LASDEARYISGTNLMVDGGFTS 271
           L    A Y++G  + VDGG  +
Sbjct: 234 LCFPAASYVTGQIIYVDGGLMA 255

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 31/279 (11%)
Query: 6   STDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVC---QS 61
           S+  S A + L G+VAL TG   GIG        + GA V +         ++V    + 
Sbjct: 9   SSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK 68
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE 121
           LG +        D++K  +V +  D  V  FG LD +++N+G+    C ++ E     F+
Sbjct: 69  LGAQ--GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME-VWCDEL-EVTQELFD 124
Query: 122 KVFDINVKGVF----HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVL 176
           KVF++N +G F     G+KH  R       G II   S+A  + G+  HA Y GSK AV 
Sbjct: 125 KVFNLNTRGQFFVAQQGLKHCRR------GGRIILTSSIAAVMTGIPNHALYAGSKAAVE 178
Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-----A 231
           G  +  A + G  G+ VNC++P  V T      + +E     A  G++           A
Sbjct: 179 GFCRAFAVDCGAKGVTVNCIAPGGVKT-----DMFDENSWHYAPGGYKGMPQEKIDEGLA 233
Query: 232 NMQGTELTAN--DVANAVLFLASDEARYISGTNLMVDGG 268
           NM   +      D+  AV  L  +E+ +I+G  + + GG
Sbjct: 234 NMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 115/271 (42%), Gaps = 42/271 (15%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV------------CIADVQDNLGQQVCQSLG 63
           L  +  L+TGG  GIG + V  F   GA +            C++  Q   G QV  S+ 
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSV- 69
Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAG-ISGAPCPDIREADLSEFE 121
                    CD +   +    +      FG  LDI++NN G I   P  D    D S   
Sbjct: 70  ---------CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS--- 117
Query: 122 KVFDI--NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
             F I  N++  +H  + A  ++     G II + S+AG +       Y+ +K A+  L 
Sbjct: 118 --FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLA 175
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           +N+A E    GIR N V+P  +AT LA A   +E         F+  V     + G    
Sbjct: 176 RNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---------FKKVVISRKPL-GRFGE 225
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             +V++ V FL    A YI+G  + VDGG T
Sbjct: 226 PEEVSSLVAFLCMPAASYITGQTICVDGGLT 256

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 32/262 (12%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHCDVT 76
           +VA ITGG +GIG     +F +HG    IA           + L G           DV 
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR 87
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
               V +AVD  +++FG +DI++N A      CP       + F+ V DI+  G F+  +
Sbjct: 88  APPAVMAAVDQALKEFGRIDILINCAA-GNFLCP-AGALSFNAFKTVMDIDTSGTFNVSR 145
Query: 137 HAARIMIPQTKGTIISICSVAGAIG-GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
                      G I++I +  G  G  L  HA + +K AV  + +++A E G   IRVN 
Sbjct: 146 VLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS-AKAAVDAMTRHLAVEWGPQNIRVNS 204
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN---------DVANA 246
           ++P  ++             TE    G R      A++  T++TA+         ++A++
Sbjct: 205 LAPGPISG------------TE----GLRRLGGPQASLS-TKVTASPLQRLGNKTEIAHS 247
Query: 247 VLFLASDEARYISGTNLMVDGG 268
           VL+LAS  A Y++G  L+ DGG
Sbjct: 248 VLYLASPLASYVTGAVLVADGG 269

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-----PDTFF 70
           L G+VALITG ++GIGE+T     +  A    A        +  ++LG E          
Sbjct: 5   LQGKVALITGASSGIGEATA----RALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHV 60
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
              DV   + V +AV  TVE  G LDI+VNNAGI    P  D   AD +++ +  D N+ 
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVED---ADTTDWTRXIDTNLL 117
Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G+ +  + AA   + ++KGT++   S+AG +       Y  +K  V   ++ +  E+ + 
Sbjct: 118 GLXYXTR-AALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTER 176
Query: 190 GIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           G+RV  + P    T L   + H   +E  E  +   R            +L A D+A AV
Sbjct: 177 GVRVVVIEPGTTDTELRGHITHTATKEXYEQRISQIR------------KLQAQDIAEAV 224
Query: 248 LF 249
            +
Sbjct: 225 RY 226

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 118/252 (46%), Gaps = 28/252 (11%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           +V +ITG + GIG   VR +     +V          + +  S   +PD      D++K 
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVATS------RSIKPS--ADPDIHTVAGDISKP 80
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           E     V   +E+FG +D +VNNAG+  A  P + E    +++    +NV G FH  + A
Sbjct: 81  ETADRIVREGIERFGRIDSLVNNAGVFLA-KPFV-EXTQEDYDHNLGVNVAGFFHITQRA 138
Query: 139 ARIMIPQTKGTIISICSVAGAIGGLG-PHAYTG-SKHAVLGLNKNVAAELGKYGIRVNCV 196
           A   + Q  G I+SI +       +G P A    +K  +  + +++A E  + G+RVN V
Sbjct: 139 AAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRVNAV 198
Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           SP  + T       P E  T   + G  + V R   ++       DV +AVL+L  + A 
Sbjct: 199 SPGVIKT----PXHPAE--THSTLAGL-HPVGRXGEIR-------DVVDAVLYL--EHAG 242
Query: 257 YISGTNLMVDGG 268
           +I+G  L VDGG
Sbjct: 243 FITGEILHVDGG 254

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 28/257 (10%)
Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
           + R  ++TGG  GIG+     F + G KVC  D+ +       +     P+ F+ H DV 
Sbjct: 1   MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---RPNLFYFHGDVA 57
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNA--GISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
               +   V+  +EK   +D++VNNA  G  G     + E    EF+ +  + +K  +  
Sbjct: 58  DPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYE----EFDYILSVGLKAPYE- 112
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +    R  + + KG II+I S           AY  +K  ++ L   +A  LG   + VN
Sbjct: 113 LSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVN 171
Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           C++P     G       +E   ED            A   G   T  D++N VLFL   +
Sbjct: 172 CIAP-----GWINVTEQQEFTQEDCA----------AIPAGKVGTPKDISNMVLFLCQQD 216
Query: 255 ARYISGTNLMVDGGFTS 271
             +I+G  ++VDGG + 
Sbjct: 217 --FITGETIIVDGGMSK 231

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 26/278 (9%)
Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA--DVQD------N 53
           S + + D    V RL G+ ALITG   GIG    R F   GA++ ++  DV +       
Sbjct: 4   SMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRA 63
Query: 54  LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR 113
           LG+Q         D      D+ + +          E FG LD++VNNAGIS  P P + 
Sbjct: 64  LGEQFGT------DVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGIS-HPQP-VV 115
Query: 114 EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSK 172
           + D   F+    +N++          + M+   +G  II++ S A        +AY  SK
Sbjct: 116 DTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSK 175
Query: 173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
             ++   K +A ELG +GIR N V P  V T +      +E ++          +AR   
Sbjct: 176 AGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSA-------PMIARIP- 227
Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             G     ++V++AV++LASD A  I+G ++ VDGG+T
Sbjct: 228 -LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYT 264

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 10/201 (4%)
Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA--DVQDNLG-QQVCQSLGG 64
           D    +  L G+VA++TG + GIG +  R     GA+V +   DV+     ++   + GG
Sbjct: 19  DDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG 78
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEK 122
           E ++  C  D++  + + +     +   G  D++VNNAG+   G P   ++ A   E++ 
Sbjct: 79  EAESHAC--DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPA---EWDA 133
Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           +  +N+K  +  ++  A  MI   +G II+I S+AG        AYT SK  + GL  + 
Sbjct: 134 LIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSA 193
Query: 183 AAELGKYGIRVNCVSPYAVAT 203
           A EL ++ +RV+ V+P +V T
Sbjct: 194 AEELRQHQVRVSLVAPGSVRT 214

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 25/264 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHC 73
            V +  ++TGG  GIG +  R     GA V +         +V + +G E    T    C
Sbjct: 12  FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 71
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVF 132
           DV+  + V   +       G +  ++ NAG+S   P  ++   D   F  V+D+NV GVF
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHED---FAFVYDVNVFGVF 128
Query: 133 HGMKHAARIMI-PQTKGTIISICSVAGAI-------GGLGPHAYTGSKHAVLGLNKNVAA 184
           +  +  A++ +  Q KG+I+   S++  I       G L    Y  SK A   L K +AA
Sbjct: 129 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 188
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E    GIRVN +SP  V T    AH+ ++ R   A     + +  N   Q  E+T     
Sbjct: 189 EWASAGIRVNALSPGYVNTD-QTAHMDKKIRDHQA-----SNIPLNRFAQPEEMT----G 238
Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
            A+L L SD A Y++G    +DGG
Sbjct: 239 QAILLL-SDHATYMTGGEYFIDGG 261

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 125/266 (46%), Gaps = 41/266 (15%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI------------ADVQDNLGQQV--CQSLGG 64
           + AL+TG + G+G++      ++G  + I            A+  + LG +V   ++  G
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVG 64
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF 124
           +P          K +++   +D   E FG LD+ VNNA  SG   P + E + + ++   
Sbjct: 65  QP---------AKIKEMFQQID---ETFGRLDVFVNNAA-SGVLRP-VMELEETHWDWTM 110
Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVA 183
           +IN K +    + AA++M     G I+SI S+ G+I  L  +   G SK A+  L + +A
Sbjct: 111 NINAKALLFCAQEAAKLMEKNGGGHIVSISSL-GSIRYLENYTTVGVSKAALEALTRYLA 169
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLP-EEERTEDAMVGFRNFVARNANMQGTELTAND 242
            EL    I VN VS  A+ T  AL H P  E+  ED         AR     G  +   D
Sbjct: 170 VELSPKQIIVNAVSGGAIDTD-ALKHFPNREDLLED---------ARQNTPAGRMVEIKD 219
Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           + + V FL S +A  I G  ++VDGG
Sbjct: 220 MVDTVEFLVSSKADMIRGQTIIVDGG 245

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 23/252 (9%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGE--PDTFF 70
           RL  R AL+TGG +GIG +    + + GA V I     ++   QQV ++L  E       
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQV-KALIEECGRKAVL 104
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D++ E    S V    E  G LDI+   AG   A  P+I++    +F++ F +NV  
Sbjct: 105 LPGDLSDESFARSLVHKAREALGGLDILALVAGKQTA-IPEIKDLTSEQFQQTFAVNVFA 163
Query: 131 VFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHA--YTGSKHAVLGLNKNVAAELG 187
           +F   + A  ++    KG +II+  S+        PH   Y  +K A+L  ++ +A ++ 
Sbjct: 164 LFWITQEAIPLL---PKGASIITTSSIQAY--QPSPHLLDYAATKAAILNYSRGLAKQVA 218
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           + GIRVN V+P  + T L ++      +T+D +  F          Q  EL     A   
Sbjct: 219 EKGIRVNIVAPGPIWTALQISG----GQTQDKIPQFGQQTPMKRAGQPAEL-----APVY 269
Query: 248 LFLASDEARYIS 259
           ++LAS E+ Y++
Sbjct: 270 VYLASQESSYVT 281

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEP--DTFFCHCDVTK 77
           A+ITGGA  IG S     H+ G +V +     +   Q++   L          C  D++ 
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73
Query: 78  EE---DVCS-AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL--SEFEKVFDINVKGV 131
                D C   +D +   FG  D++VNNA  +  P P +   D   +   K  D  V  +
Sbjct: 74  SSSLLDCCEDIIDCSFRAFGRCDVLVNNAS-AYYPTPLLPGDDTNGAADAKPIDAQVAEL 132
Query: 132 FHGMKHAARIMIP-----QTKG--------TIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           F     A   +I      Q +G        +++++C     +   G   YT +KHA+ GL
Sbjct: 133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 192
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLAL--AHLPEEERTEDAMVGFRNFVARNANMQGT 236
            +  A EL    IRVN V+P     GL+L    +P+E + E     +R    R   +  +
Sbjct: 193 TRAAALELAPRHIRVNAVAP-----GLSLLPPAMPQETQEE-----YR----RKVPLGQS 238
Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           E +A  +A+A+ FL S +A YI+GT L VDGG 
Sbjct: 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 39/273 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEP--DTFFCHCDVTK 77
           A+ITGGA  IG S     H+ G +V +     +   Q++   L          C  D++ 
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73
Query: 78  EE---DVCS-AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL--SEFEKVFDINVKGV 131
                D C   +D +   FG  D++VNNA  +  P P +   D   +   K  D  V  +
Sbjct: 74  SSSLLDCCEDIIDCSFRAFGRCDVLVNNAS-AYYPTPLLPGDDTNGAADAKPIDAQVAEL 132
Query: 132 FHGMKHAARIMIP-----QTKG--------TIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           F     A   +I      Q +G        +++++C     +   G   YT +KHA+ GL
Sbjct: 133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHALGGL 192
Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLAL--AHLPEEERTEDAMVGFRNFVARNANMQGT 236
            +  A EL    IRVN V+P     GL+L     P+E + E     +R    R   +  +
Sbjct: 193 TRAAALELAPRHIRVNAVAP-----GLSLLPPAXPQETQEE-----YR----RKVPLGQS 238
Query: 237 ELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           E +A  +A+A+ FL S +A YI+GT L VDGG 
Sbjct: 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 10/213 (4%)
Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI-READLSEFEKV 123
           +P   +   ++  +     AV  T+  FG LD +VNNAG++     D  R+A ++  E+ 
Sbjct: 54  QPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERN 113
Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             I+    ++ M H     +  T+G I++I S     G      Y  SK A L L +  A
Sbjct: 114 L-IH----YYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWA 168
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
             L ++G+RVN V P  V T L    +   E  E  +      +A    +     T +++
Sbjct: 169 VALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAE----IAAKVPLGRRFTTPDEI 224
Query: 244 ANAVLFLASDEARYISGTNLMVDGGFTSVNHSL 276
           A+  +FL S  A + +G  L VDGG+T ++ +L
Sbjct: 225 ADTAVFLLSPRASHTTGEWLFVDGGYTHLDRAL 257

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 30/260 (11%)
Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVC-----IADVQDNLGQQVCQSLG 63
           + P ++R   R+AL+TG + GIG +  R   + G KV      + ++++   +  C+S  
Sbjct: 23  ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE--CKS-A 79
Query: 64  GEPDTFFCH-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD-IREADLSEFE 121
           G P T   + CD++ EED+ S       +   +DI +NNAG++    PD +     S ++
Sbjct: 80  GYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR---PDTLLSGSTSGWK 136
Query: 122 KVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAG--AIGGLGPHAYTGSKHAVLG 177
            +F++NV  +    + A + M  +    G II+I S++G   +     H Y+ +K+AV  
Sbjct: 137 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTA 196
Query: 178 LNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           L + +  EL   +  IR  C+SP  V T  A      ++  E A   +            
Sbjct: 197 LTEGLRQELREAQTHIRATCISPGVVETQFAFKL--HDKDPEKAAATYEQMKC------- 247
Query: 236 TELTANDVANAVLFLASDEA 255
             L   DVA AV+++ S  A
Sbjct: 248 --LKPEDVAEAVIYVLSTPA 265

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVC-------QSL 62
           R  GRVA++TG   G+G     LF + GAKV + D+      D   Q+         +  
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75
Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL----- 117
           GGE        D     D    ++  ++ FG +DI+VNNAGI       +R+  L     
Sbjct: 76  GGE-----AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGI-------LRDRSLVKTSE 123
Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
            ++  V D+++KG F   + A   M  Q  G II   S +G  G  G   YT +K  ++G
Sbjct: 124 QDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIG 183
Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE 212
           L   VA E  +  +  N + P A A+ +    LP+
Sbjct: 184 LANTVAIEGARNNVLCNVIVPTA-ASRMTEGILPD 217

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 27/267 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHC 73
           L G  AL+TGG+ GIG + V      GA+V      +    + C  +  E   +     C
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE-CLEIWREKGLNVEGSVC 77
Query: 74  DVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEF-EKVFDINVKGV 131
           D+    +    +      F G L+I+VNNAG+       +   +  +F EK ++I +   
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGV-------VIHKEAKDFTEKDYNIIMGTN 130
Query: 132 FHGMKHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           F    H ++I  P  K    G +I + S+AG         Y+ SK A+  + K++A E  
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190
Query: 188 KYGIRVNCVSPYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           K  IRVN V+P  + T L   A+   P ++   D      NF+ +     G      +V+
Sbjct: 191 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEID------NFIVKTP--MGRAGKPQEVS 242
Query: 245 NAVLFLASDEARYISGTNLMVDGGFTS 271
             + FL    A YI+G  +  DGGFT+
Sbjct: 243 ALIAFLCFPAASYITGQIIWADGGFTA 269

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
            ITG  +G GE+  R F + G  + +   ++   Q +   L  +        DV      
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAX 84
Query: 82  CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI 141
            +AVD   E+F TL  ++NNAG++    P  +  DL +++   D N+KG+     ++ R+
Sbjct: 85  SAAVDNLPEEFATLRGLINNAGLALGTDP-AQSCDLDDWDTXVDTNIKGLL----YSTRL 139
Query: 142 MIPQ-----TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           ++P+        +I+++ SVAG     G H Y G+K  V   + N+  +L   G+RV  +
Sbjct: 140 LLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNL 199
Query: 197 SP 198
            P
Sbjct: 200 EP 201

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 117/261 (44%), Gaps = 32/261 (12%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTFFCH 72
           +VA++TG + GIG +        G  V I      A  ++  G+   ++ GG+  T    
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGK--IEAAGGKALT--AQ 83
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+    V        E FG +D++VNNAGI   P   I E   + F++V  +N+KG F
Sbjct: 84  ADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIX--PLTTIAETGDAVFDRVIAVNLKGTF 141
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYG 190
           + ++ AA+ +  +  G II+  +    +G L P    Y  +K  V      ++ EL    
Sbjct: 142 NTLREAAQRL--RVGGRIINXST--SQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGRD 197
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL--TANDVANAVL 248
           I VN V+P   AT L L    +E R             R A +   E   T  D+A AV 
Sbjct: 198 ITVNAVAPGPTATDLFLEGKSDEVRD------------RFAKLAPLERLGTPQDIAGAVA 245
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FLA  +  +++G  L  +GG 
Sbjct: 246 FLAGPDGAWVNGQVLRANGGI 266

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 114/257 (44%), Gaps = 21/257 (8%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF-CHCDVTK 77
           +V +ITGG++G G+     F K GA+V I        ++    +   P        DV  
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRN 66
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            +D+   ++   EKFG +DI++NNA      CP   +  ++ +  V +I + G F+  + 
Sbjct: 67  TDDIQKXIEQIDEKFGRIDILINNAA-GNFICP-AEDLSVNGWNSVINIVLNGTFYCSQA 124
Query: 138 AARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNC 195
             +  I +  KG II+  +      G G      +K  VL   K +A E G KYGIRVN 
Sbjct: 125 IGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNA 184
Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLA 251
           ++P  +            ERT  A   + +       +Q   L    T  ++A    +L 
Sbjct: 185 IAPGPI------------ERTGGADKLWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLC 232
Query: 252 SDEARYISGTNLMVDGG 268
           SDEA YI+GT    DGG
Sbjct: 233 SDEAAYINGTCXTXDGG 249

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 13  VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
           V +L  RV ++TG ++G+G +  R   + GA V   D++   G++    LG      F +
Sbjct: 2   VXQLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAA--VRFRN 59
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READ--LSEFEKVFDINV 128
            DVT E D  +A+    ++FG +  +VN AG   AP   I  R     L  F +   +N+
Sbjct: 60  ADVTNEADATAALAFAKQEFGHVHGLVNCAGT--APGEKILGRSGPHALDSFARTVAVNL 117
Query: 129 KGVFHGMKHAARIMI---PQT---KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
            G F+ ++ AA +     P     +G I++  S+A   G +G  AY  SK  V  L    
Sbjct: 118 IGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPA 177
Query: 183 AAELGKYGIRVNCVSP 198
           A EL ++GIRV  ++P
Sbjct: 178 ARELARFGIRVVTIAP 193

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 17/261 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDV 75
           G+VA+ITG ++GIG +    F K GA + +   Q +   +  +SL  +          DV
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV 66
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              E V + V+     FG  DI+VNNAG        I EA   +++  ++++V       
Sbjct: 67  ATPEGVDAVVESVRSSFGGADILVNNAGTGSNET--IMEAADEKWQFYWELHVMAAVR-- 122
Query: 136 KHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              AR ++P  +    G II   S+           Y  +K A++  +K +A E+ K  I
Sbjct: 123 --LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT---ELTANDVANAVL 248
           RVNC++P  + T   +     +E T+D    ++ ++   A+         +  ++AN  +
Sbjct: 181 RVNCINPGLILTPDWIK--TAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFV 238
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL S+ A Y  G+   VDGG 
Sbjct: 239 FLCSERATYSVGSAYFVDGGM 259

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 40/257 (15%)
Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDV 81
           L+   + GIG +   +  + GA+V I    + L ++            +  CD+ K+   
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR--------YVVCDLRKD--- 71
Query: 82  CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI 141
              +DL  EK   +DI+V NAG  G       E    +F++  D     +F  M    R 
Sbjct: 72  ---LDLLFEKVKEVDILVLNAG--GPKAGFFDELTNEDFKEAID----SLFLNMIKIVRN 122
Query: 142 MIPQTK----GTIISICS--VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
            +P  K    G I++I S  V   I  L  +    ++ A+ G  K ++ E+  YGI VNC
Sbjct: 123 YLPAMKEKGWGRIVAITSFSVISPIENL--YTSNSARMALTGFLKTLSFEVAPYGITVNC 180
Query: 196 VSPYAVATGLALAHLPEEERTE-DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
           V+P    T      L EE++ + ++ +  R                 ++A+ V FL S++
Sbjct: 181 VAPGWTETERVKELLSEEKKKQVESQIPMRRMA-----------KPEEIASVVAFLCSEK 229
Query: 255 ARYISGTNLMVDGGFTS 271
           A Y++G  ++VDGG + 
Sbjct: 230 ASYLTGQTIVVDGGLSK 246

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 6/209 (2%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGE 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +
Sbjct: 6   QPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQ 65
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         ED           +  LD +++NAG+ G  CP + E D   ++ V  
Sbjct: 66  PQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQDPQVWQDVMQ 124
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +NV   F   +    +++    G+++   S  G  G     AY  SK A  G+ + +A E
Sbjct: 125 VNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADE 184
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEE 214
             +  +RVNC++P    T +  +  P E+
Sbjct: 185 YQQR-LRVNCINPGGTRTAMRASAFPTED 212

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 116/264 (43%), Gaps = 25/264 (9%)
Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPD 67
           ++QR   R  ++ G    IG +    F + GA V +    A           + LG    
Sbjct: 2   SLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RS 59
Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
                 D+T   +V +A+    +KFG +  +V+ AG   A    I E D + + +V D+N
Sbjct: 60  ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIAR-KTIAEMDEAFWHQVLDVN 118
Query: 128 VKGVFHGMKHAARIMIPQTK--GTIISICSVAGAIGG-LGPHAYTGSKHAVLGLNKNVAA 184
           +  +F   K A    +P+    G I++  S AG  GG  G  AY  SK AV+   + +A 
Sbjct: 119 LTSLFLTAKTA----LPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAK 174
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E+G   IRVN V P  ++T         E R   A           A     E ++ DVA
Sbjct: 175 EVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVA----------GATSLKREGSSEDVA 223
Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
             V FLASD+A Y++G    ++GG
Sbjct: 224 GLVAFLASDDAAYVTGACYDINGG 247

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 124/265 (46%), Gaps = 27/265 (10%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  LITG + GIG +T RLF + GAKV +       N+ + +  S+  +        
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIA-SMRADGGDAAFFA 63
Query: 74  DVTKEEDVCSA-VDLTVEKFGTLDIMVNNAG--ISGAPCPDIREADLSEFEKVFDINVKG 130
                 + C   VD  V KFG +D+++NNAG  +   P P+I   D + ++ V D N++ 
Sbjct: 64  ADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEI---DDTFYDAVMDANIRS 120
Query: 131 VFHGMKHAARIMIPQTKGT-----IISICSVAGAIGGLGPHAYTGSKHAVL-GLNKNVAA 184
           V    K A   +    K +     +IS  S+AG  GG       G+  A L  ++KN   
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVD 180
Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
              K G+R N VSP  V T          ++T+D     R+ ++    M G   TA ++A
Sbjct: 181 FHTKDGVRFNIVSPGTVDTAF------HADKTQDV----RDRISNGIPM-GRFGTAEEMA 229
Query: 245 NAVLFLASDEAR-YISGTNLMVDGG 268
            A LF AS  A  YI+G  L ++GG
Sbjct: 230 PAFLFFASHLASGYITGQVLDINGG 254

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDV 75
           G+VA+ITG ++GIG +    F K GA + +   Q +   +  +SL  +          DV
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV 66
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              E V + V+     FG  DI+VNNAG        I EA   +++  +++ V       
Sbjct: 67  ATPEGVDAVVESVRSSFGGADILVNNAGTGSNET--IMEAADEKWQFYWELLVMAAVR-- 122
Query: 136 KHAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              AR ++P  +    G II   S+           Y  +K A++  +K +A E+ K  I
Sbjct: 123 --LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180
Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT---ELTANDVANAVL 248
           RVNC++P  + T   +     +E T+D    ++ ++   A+         +  ++AN  +
Sbjct: 181 RVNCINPGLILTPDWIK--TAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFV 238
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL S+ A Y  G+   VDGG 
Sbjct: 239 FLCSERATYSVGSAYFVDGGM 259

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 5/209 (2%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE---- 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   ++V Q +  E    
Sbjct: 6   QPKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQ 65
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         E+     D     +  LD +++NAG+ G   P + E D   ++ V  
Sbjct: 66  PQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGP-MSEQDPQIWQDVMQ 124
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +NV   F   +    +++    G+++   S  G  G     AY  SK A  G+ + +A E
Sbjct: 125 VNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADE 184
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEE 214
                +RVNC++P    T +  +  P E+
Sbjct: 185 YQNRSLRVNCINPGGTRTSMRASAFPTED 213

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 200 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 258
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 259 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 308
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 309 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 365
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 366 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 416
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 417 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 448

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 184 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 242
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 243 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 292
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 293 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 349
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 350 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 400
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 401 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 432

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 221 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 279
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 280 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 329
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 330 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 386
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 387 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 437
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 438 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 469

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 208 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 266
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 267 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 316
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 317 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 373
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 374 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 424
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 425 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 456

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+ ALITG A    I     + FH+ GA++        L ++V +   G        C
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKC 78
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+ +ED+ +      E +G+LDI+V++  I+ AP  + +   +    + F I +    +
Sbjct: 79  DVSLDEDIKNLKKFLEENWGSLDIIVHS--IAYAPKEEFKGGVIDTSREGFKIAMDISVY 136
Query: 134 GMKHAARIMIPQTKGT--IISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKYG 190
            +    R ++P  +G    I   S  GA   +  +   G +K A+    + +A ++ K+G
Sbjct: 137 SLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHG 196
Query: 191 IRVNCVSPYAVATGLALA----HLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            R+N +S   V T  A +    HL  E  T+              N  G  +T  DV + 
Sbjct: 197 HRINAISAGPVKTLAAYSITGFHLLMEHTTK-------------VNPFGKPITIEDVGDT 243
Query: 247 VLFLASDEARYISGTNLMVDGGFTSVNHSLRVF 279
            +FL SD AR I+G  + VD G+    H + VF
Sbjct: 244 AVFLCSDWARAITGEVVHVDNGY----HIMGVF 272

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 39/274 (14%)
Query: 8   DSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQS 61
           DS+P     + L G+VA++TG A GIG +   +F + GA V   DV+   +NL +   + 
Sbjct: 192 DSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK- 250
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-----GTLDIMVNNAGISGAPCPDIREAD 116
           +GG         DVT ++    AVD   E       G  DI+VNNAGI+      +   D
Sbjct: 251 VGGTA----LWLDVTADD----AVDKISEHLRDHHGGKADILVNNAGITRDKL--LANMD 300
Query: 117 LSEFEKVFDINVKGVFH---GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH 173
            + ++ V  +N+        G+     I      G +I + S+AG  G  G   Y  +K 
Sbjct: 301 DARWDAVLAVNLLAPLRLTEGLVGNGSI---GEGGRVIGLSSIAGIAGNRGQTNYATTKA 357
Query: 174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM 233
            ++G+ + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+ +
Sbjct: 358 GMIGITQALAPGLAAKGITINAVAPGFIETQMT-AAIPLATRE----VGRR----LNSLL 408
Query: 234 QGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
           QG +    DVA A+ + AS  +  ++G  + V G
Sbjct: 409 QGGQPV--DVAEAIAYFASPASNAVTGNVIRVCG 440

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 22/262 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L GR+AL+TGG+ GIG+   +   + GA+V I              L    D      D+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           + E           E    LDI+VNNAG S      +    +S +EKV  +NV  VF  +
Sbjct: 87  SSEAGARRLAQALGELSARLDILVNNAGTSWGAA--LESYPVSGWEKVMQLNVTSVFSCI 144
Query: 136 KHAARIM----IPQTKGTIISICSVAGAIGGLG--PHAYTGSKHAVLGLNKNVAAELGKY 189
           +    ++      +    +I+I SVAG I  +G   +AY  SK A+  L++ +A EL   
Sbjct: 145 QQLLPLLRRSASAENPARVINIGSVAG-ISAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203
Query: 190 GIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            I VN ++P    + +   +A+ P+    + A +             G      ++A   
Sbjct: 204 HINVNVIAPGRFPSRMTRHIANDPQALEADSASIPM-----------GRWGRPEEMAALA 252
Query: 248 LFLASDEARYISGTNLMVDGGF 269
           + LA     Y++G  + +DGGF
Sbjct: 253 ISLAGTAGAYMTGNVIPIDGGF 274

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGEPDTFFCHCD 74
           R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +P  F     
Sbjct: 11  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL 70
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
               E+        V  +  LD +++NAG+ G  CP + E +   ++ V  INV   F  
Sbjct: 71  TCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCP-MSEQNPQVWQDVMQINVNATFML 129
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +    +++    G+++   S  G  G     AY  SK A  G+ + +A E  +  +RVN
Sbjct: 130 TQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVN 188
Query: 195 CVSPYAVATGLALAHLPEEE 214
           C++P    T +  +  P E+
Sbjct: 189 CINPGGTRTAMRASAFPTED 208

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFC 71
           L  +V +I+G    +G +  R   + GA + +A    +  +++ +QV  +          
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT---GRRALSV 65
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             D+T +  V   VD T++ +G +D+++NNA       P ++    + FE + D     V
Sbjct: 66  GTDITDDAQVAHLVDETMKAYGRVDVVINNA----FRVPSMKPFANTTFEHMRDAIELTV 121
Query: 132 FHGMK--HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           F  ++        + ++KG ++++ S+          AY  +K A+L +++ +A ELG+ 
Sbjct: 122 FGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEK 181
Query: 190 GIRVNCVSPYAVATGLALAHLPEE-----ERTEDAMVGFRNFVARNANMQGTEL----TA 240
           GIRVN V P  +  G   ++   +        ED           NA   G++L    T 
Sbjct: 182 GIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIY---------NAAAAGSDLKRLPTE 232
Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
           ++VA+A+LF+ASD A  I+G  L V+ G
Sbjct: 233 DEVASAILFMASDLASGITGQALDVNCG 260

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 41/278 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           A++TG A  IG +     H+ G +V I     A+   +L  ++ +          C  D+
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN--TAVVCQADL 83
Query: 76  TKEEDVCSAVDLTVEK----FGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVKG 130
           T    + ++ +  +      FG  D++VNNA  +  P P ++ + + +   K  +  V  
Sbjct: 84  TNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVAE 142
Query: 131 VFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHAV 175
           +  G    A  ++  +     KGT          I+++C        +    Y   KHA+
Sbjct: 143 LI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHAL 201
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   +  
Sbjct: 202 VGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLGR 249
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 250 REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 287

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 41/278 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           A++TG A  IG +     H+ G +V I     A+   +L  ++ +          C  D+
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN--TAVVCQADL 63
Query: 76  TKEEDVCSAVDLTVEK----FGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVKG 130
           T    + ++ +  +      FG  D++VNNA  +  P P ++ + + +   K  +  V  
Sbjct: 64  TNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVAE 122
Query: 131 VFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHAV 175
           +  G    A  ++  +     KGT          I+++C        +    Y   KHA+
Sbjct: 123 LI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHAL 181
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   +  
Sbjct: 182 VGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLGR 229
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 230 REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 267

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 103/269 (38%), Gaps = 24/269 (8%)
Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           SN+    P    L  R+ L+TG + GIG      + ++GA V +    +   ++V Q + 
Sbjct: 1   SNAXHYQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIA 60
Query: 64  GE----PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
            E    P  F         E+     D     +  LD +++NAG+ G   P   E D   
Sbjct: 61  DEQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGP-XSEQDPQI 119
Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           ++ V  +NV   F   +    +++    G+++   S  G  G     AY  SK A  G  
Sbjct: 120 WQDVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXX 179
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           + +A E     +RVNC++P    T    +  P    TED                    T
Sbjct: 180 QVLADEYQNRSLRVNCINPGGTRTSXRASAFP----TEDPQ---------------KLKT 220
Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             D+    L+L  D++R  +G       G
Sbjct: 221 PADIXPLYLWLXGDDSRRKTGXTFDAQPG 249

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 41/278 (14%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           A++TG A  IG +     H+ G +V I     A+   +L  ++ +          C  D+
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSN--TAVVCQADL 83
Query: 76  TKEEDVCSAVDLTVEK----FGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVKG 130
           T    + ++ +  +      FG  D++VNNA  +  P P ++ + + +   K  +  V  
Sbjct: 84  TNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVAE 142
Query: 131 VFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHAV 175
           +  G    A  ++  +     KGT          I+++C        +    Y   KHA+
Sbjct: 143 LI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHAL 201
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   +  
Sbjct: 202 VGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLGR 249
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
            E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 250 REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 287

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGGA+G+G +        G +V + D++            GE D  +   DVT+E
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----------GE-DLIYVEGDVTRE 51
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD--LSEFEKVFDINVKGVFHGMK 136
           EDV  AV    E+   L  +V+ AG+  A     +E    L  F +V ++N+ G F+ ++
Sbjct: 52  EDVRRAVARAQEE-APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 110
Query: 137 HAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            AA  M          +G I++  SVA   G +G  AY  SK  V+ L    A EL  +G
Sbjct: 111 LAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWG 170
Query: 191 IRVNCVSPYAVATGLALAHLPEEER 215
           IRV  V+P    T L L  LPE+ +
Sbjct: 171 IRVVTVAPGLFDTPL-LQGLPEKAK 194

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 16  LVGRVALITGGATGIGESTVRLF---------HKHGAKVC-----IADVQDNLGQQVCQS 61
           L  +V +I GG   +G  T + F         H H AK       + D  ++ G +V   
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA-- 66
Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG-ISGAPCPDIREADLSEF 120
                       D++ EE+V    D   ++FG +DI +N  G +   P  +  EA   EF
Sbjct: 67  --------LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEA---EF 115
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC-SVAGAIGGLGPHAYTGSKHAVLGLN 179
           + +  IN K  +  +K AA+ M P   G II+I  S+  A  G     Y G+K  V    
Sbjct: 116 DAMDTINNKVAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGFYS-TYAGNKAPVEHYT 172
Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           +  + EL K  I VN ++P  + T        +E +   A           +   G +LT
Sbjct: 173 RAASKELMKQQISVNAIAPGPMDTSFFYG---QETKESTAF--------HKSQAMGNQLT 221
Query: 240 A-NDVANAVLFLASDEARYISGTNLMVDGGFTS 271
              D+A  + FL +D   +I+G  +  +GG+T+
Sbjct: 222 KIEDIAPIIKFLTTD-GWWINGQTIFANGGYTT 253

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 18/280 (6%)
Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHG---AKVCIADVQDNLGQQVCQ 60
           S+ +    A +RL  +  LITG + GIG++T   + +      K+ +A  +    +++ +
Sbjct: 19  SHMSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKK 78
Query: 61  SLGGEPDTFFCHC---DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL 117
           ++  E      H    D+T+ E +   ++   ++F  +DI+VNNAG        + +   
Sbjct: 79  TIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG-KALGSDRVGQIAT 137
Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
            + + VFD NV  + +  +    I   +  G I+++ S+AG         Y  SK AV  
Sbjct: 138 EDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGA 197
Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
              ++  EL    IRV  ++P  V T  +L      E             A+N     T 
Sbjct: 198 FTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQ-----------AKNVYKDTTP 246
Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR 277
           L A+DVA+ +++  S +   +    L+      S +H  R
Sbjct: 247 LMADDVADLIVYATSRKQNTVIADTLIFPTNQASPHHIFR 286

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           ++A++TG  +G+G +        G  V +A  + +  Q+    +G   D      DVT  
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD--DALCVPTDVTDP 86
Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           + V +    TVEKFG +D++ NNAG +GAP     +   +++++V D N+ G F   + A
Sbjct: 87  DSVRALFTATVEKFGRVDVLFNNAG-TGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEA 145
Query: 139 ARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
            R+   Q    G II+  S++          YT +KHA+ GL K+ +
Sbjct: 146 FRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTS 192

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 20/246 (8%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHC 73
           G+V ++TG + GIG        K GA V I     D    + Q+  QSLGG+     C  
Sbjct: 5   GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEA-QSLGGQCVPVVC-- 61
Query: 74  DVTKEEDVCSAVD-LTVEKFGTLDIMVNNAGISGAPCPDIR-----EADLSEFEKVFDIN 127
           D ++E +V S  + +  E+ G LD++VNNA        + R     E   S ++ + ++ 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           ++G +    + AR+M+P  +G I+ I S  G++  +    Y   K A   L  + A EL 
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISS-PGSLQYMFNVPYGVGKAACDKLAADCAHELR 180
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           ++G+    + P  V T L   H+ +EE  +D +   + F +  ++ + TEL+       V
Sbjct: 181 RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPV--LKQFKSAFSSAETTELS----GKCV 234
Query: 248 LFLASD 253
           + LA+D
Sbjct: 235 VALATD 240

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 31/272 (11%)
Query: 6   STDSSPAV---QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVC 59
           + DS+P     + L G+VA++TG A GIG +   +F + GA V   DV    ++L ++V 
Sbjct: 198 AADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDL-KRVA 256
Query: 60  QSLGGEPDTFFCHCDVTKEEDVCS-AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
             +GG   T     DVT ++ V      +T    G +DI+VNNAGI+      +   D  
Sbjct: 257 DKVGGTALTL----DVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKL--LANMDEK 310
Query: 119 EFEKVFDINV---KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
            ++ V  +N+   + +  G+     I      G +I + S+AG  G  G   Y  +K  +
Sbjct: 311 RWDAVIAVNLLAPQRLTEGLVGNGTI---GEGGRVIGLSSMAGIAGNRGQTNYATTKAGM 367
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           +GL + +A  L   GI +N V+P  + T +  A +P   R     VG R     N+  QG
Sbjct: 368 IGLAEALAPVLADKGITINAVAPGFIETKMTEA-IPLATRE----VGRR----LNSLFQG 418
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDG 267
            +    DVA  + + AS  +  ++G  + V G
Sbjct: 419 GQPV--DVAELIAYFASPASNAVTGNTIRVCG 448

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 27/259 (10%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI------ADVQDNLGQQVCQSLGGEPDTFFCH 72
           R  L+TG + GIG +  R     G  + +      A  Q+ L   V     G   +F   
Sbjct: 27  RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSF--- 83
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGV 131
            DV   E     ++  + + G    +V+NAGI+  A  P +   D   ++ V   N+   
Sbjct: 84  -DVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDD---WDAVIHTNLDSF 139
Query: 132 FHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           ++ ++     MI  +  G II++ SV+G +G  G   Y+ +K  ++G  K +A EL K  
Sbjct: 140 YNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRK 199
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           I VNC++P  + TG+        E  E A+    + +      Q     A +VA    +L
Sbjct: 200 ITVNCIAPGLIDTGMI-------EMEESALKEAMSMIPMKRMGQ-----AEEVAGLASYL 247
Query: 251 ASDEARYISGTNLMVDGGF 269
            SD A Y++   + ++GG 
Sbjct: 248 MSDIAGYVTRQVISINGGM 266

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 6/209 (2%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGE 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +
Sbjct: 4   QPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQ 63
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         E+           +  LD +++NAG+ G  CP + E +   ++ V  
Sbjct: 64  PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQNPQVWQDVMQ 122
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +NV   F   +    +++    G+++   S  G  G     AY  SK A  G+ + +A E
Sbjct: 123 VNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADE 182
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEE 214
             +  +RVNC++P    T +  +  P E+
Sbjct: 183 YQQR-LRVNCINPGGTRTAMRASAFPTED 210

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++TG A  IG +     H+ G +V I     +   +   SL  E +    +  V  + D
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVI---HYHNSAEAAVSLADELNKERSNTAVVXQAD 82
Query: 81  VCSA----------VDLTVEKFGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVK 129
           + ++          ++     FG  D++VNNA  +  P P ++ + + +   K  +  V 
Sbjct: 83  LTNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVA 141
Query: 130 GVFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHA 174
            +  G    A  ++  +     KGT          I+++C        +    Y   KHA
Sbjct: 142 ELI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHA 200
Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           ++GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   + 
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLG 248
Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
             E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 249 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 287

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++TG A  IG +     H+ G +V I     +   +   SL  E +    +  V  + D
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVI---HYHNSAEAAVSLADELNKERSNTAVVXQAD 62
Query: 81  VCSA----------VDLTVEKFGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVK 129
           + ++          ++     FG  D++VNNA  +  P P ++ + + +   K  +  V 
Sbjct: 63  LTNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVA 121
Query: 130 GVFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHA 174
            +  G    A  ++  +     KGT          I+++C        +    Y   KHA
Sbjct: 122 ELI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHA 180
Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           ++GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   + 
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLG 228
Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
             E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 229 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 267

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE 79
           + L+TG   G GE   R F + G KV     +    Q++   LG   + +    DV    
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGD--NLYIAQLDVRNRA 59
Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA 139
            +   +     ++  +DI+VNNAG++    P   +A + ++E + D N KG+ +  +   
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNAGLALGMEP-AHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 140 RIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY 199
             M+ +  G II+I S AG+    G + Y  +K  V   + N+  +L    +RV  + P 
Sbjct: 119 PGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPG 178
Query: 200 AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            V  G   +++  +     A   ++N VA         LT  DV+ AV ++++
Sbjct: 179 LVG-GTEFSNVRFKGDDGKAEKTYQNTVA---------LTPEDVSEAVWWVST 221

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++TG A  IG +     H+ G +V I     +   +   SL  E +    +  V  + D
Sbjct: 6   AVVTGAAKRIGRAIAVKLHQTGYRVVI---HYHNSAEAAVSLADELNKERSNTAVVXQAD 62
Query: 81  VCSA----------VDLTVEKFGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVK 129
           + ++          ++     FG  D++VNNA  +  P P ++ + + +   K  +  V 
Sbjct: 63  LTNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVA 121
Query: 130 GVFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHA 174
            +  G    A  ++  +     KGT          I+++C        +    Y   KHA
Sbjct: 122 ELI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 180
Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           ++GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   + 
Sbjct: 181 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLG 228
Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
             E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 229 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 267

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 25/265 (9%)
Query: 16  LVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDT 68
           L G+V ++TG  G  G+G    R   + GA V I       G     +++ ++ G +   
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
           + C  D    E     V   V  FG +D  + NAG +      I +  +  +  V  +++
Sbjct: 78  YKCQVD--SYESCEKLVKDVVADFGQIDAFIANAGATADS--GILDGSVEAWNHVVQVDL 133
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAEL 186
            G FH  K        +  G+++   S++G I        +Y  +K   + + +++A E 
Sbjct: 134 NGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW 193
Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
             +  RVN +SP  + TGL+     E ++   +M+             G +  A ++  A
Sbjct: 194 RDFA-RVNSISPGYIDTGLSDFVPKETQQLWHSMIPM-----------GRDGLAKELKGA 241
Query: 247 VLFLASDEARYISGTNLMVDGGFTS 271
            ++ ASD + Y +G +L++DGG+T+
Sbjct: 242 YVYFASDASTYTTGADLLIDGGYTT 266

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 25/263 (9%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGE 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +
Sbjct: 25  QPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQ 84
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         E+        V  +  LD +++NAG+ G  CP   E +   ++ V  
Sbjct: 85  PQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCP-XSEQNPQVWQDVXQ 143
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           INV   F   +    +++    G+++   S  G  G     AY  SK A  G  + +A E
Sbjct: 144 INVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADE 203
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
             +  +RVNC++P    T    +  P    TED                    T  D+  
Sbjct: 204 YQQR-LRVNCINPGGTRTAXRASAFP----TEDPQ---------------KLKTPADIXP 243
Query: 246 AVLFLASDEARYISGTNLMVDGG 268
             L+L  D++R  +G       G
Sbjct: 244 LYLWLXGDDSRRKTGXTFDAQPG 266

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++TG A  IG +     H+ G +V I     +   +   SL  E +    +  V  + D
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVI---HYHNSAEAAVSLADELNKERSNTAVVXQAD 82
Query: 81  VCSA----------VDLTVEKFGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVK 129
           + ++          ++     FG  D++VNNA  +  P P ++ + + +   K  +  V 
Sbjct: 83  LTNSNVLPASCEEIINSCFRAFGRCDVLVNNAS-AFYPTPLVQGDHEDNSNGKTVETQVA 141
Query: 130 GVFHGMKHAARIMIPQT-----KGT----------IISICSVAGAIGGLGPHAYTGSKHA 174
            +  G    A  ++  +     KGT          I+++C        +    Y   KHA
Sbjct: 142 ELI-GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 200
Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           ++GL ++ A EL  YGIRVN V+P      L    + EEE+ +     +R    R   + 
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAMGEEEKDK-----WR----RKVPLG 248
Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN 273
             E +A  +A+AV+FL S  A+YI+G+ + VDGG + V+
Sbjct: 249 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 287

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---------GQQVCQSLGGE 65
           R  GRV L+TG   G+G +    F + GA V + D+  +            +V + +   
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKV 123
                 + D  +E +    V   ++ FG +D++VNNAGI      D   A +S+  ++ +
Sbjct: 87  GGKAVANYDSVEEGE--KVVKTALDAFGRIDVVVNNAGI----LRDRSFARISDEDWDII 140
Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             ++++G F   + A   M  Q  G II   S +G  G  G   Y+ +K  +LGL  ++A
Sbjct: 141 HRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLA 200
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEE 213
            E  K  I  N ++P A  + +    +PE+
Sbjct: 201 IEGRKSNIHCNTIAPNA-GSRMTQTVMPED 229

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 6/209 (2%)
Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----QSLGGE 65
            P    L  R+ L+TG + GIG      + ++GA V +    +   +QV     +  G +
Sbjct: 4   QPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQ 63
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
           P  F         E+           +  LD +++NAG+ G  CP   E +   ++ V  
Sbjct: 64  PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-XSEQNPQVWQDVXQ 122
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +NV   F   +    +++    G+++   S  G  G     AY  SK A  G  + +A E
Sbjct: 123 VNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADE 182
Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEE 214
             +  +RVNC++P    T +  +  P E+
Sbjct: 183 YQQR-LRVNCINPGGTRTAMRASAFPTED 210

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 25/263 (9%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI--ADVQDNLGQQV--CQSLGGEPDTFFC 71
           L G+VAL+TG + GIG +  +     GA V I   + ++   + V   QS GG   +   
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 72  HCD-VTKEEDVCSAVDLTVE-KFGT--LDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
           + + +   E + S++D  ++ + G+   DI++NNAGI   P   I E     F++   +N
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI--GPGAFIEETTEQFFDRXVSVN 122
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            K  F  ++ A   +   ++  II+I S A  I      AY+ +K A+      +A +LG
Sbjct: 123 AKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLG 180
Query: 188 KYGIRVNCVSPYAVAT--GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
             GI VN + P  V T     L   P  ++    +  F        N  G      D+A+
Sbjct: 181 ARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAF--------NRLG---EVEDIAD 229
Query: 246 AVLFLASDEARYISGTNLMVDGG 268
              FLAS ++R+++G  + V GG
Sbjct: 230 TAAFLASPDSRWVTGQLIDVSGG 252

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 17/256 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHC 73
           G+VA ITGG TG+G+    L    GA+  IA    DV     +Q+    G +       C
Sbjct: 26  GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAI--QC 83
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV-F 132
           DV   + V + V   ++  G  +I++NNA  +G           + ++ + DI + G  F
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAF 141
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++   +++  Q     +SI ++    G         +K  V  ++K++AAE GKYG+R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 201
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            N + P  + T  A + L      E  M+G R    R         T  ++AN   FL S
Sbjct: 202 FNVIQPGPIKTKGAFSRLDPTGTFEKEMIG-RIPCGRLG-------TVEELANLAAFLCS 253
Query: 253 DEARYISGTNLMVDGG 268
           D A +I+G  +  DGG
Sbjct: 254 DYASWINGAVIKFDGG 269

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 118/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 8   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 67
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +     V  + G  P T F  C           V      +G  D++VNNA         
Sbjct: 68  NVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNASSFYPTPLL 119
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 120 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 179
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++     +
Sbjct: 180 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL---VD 231
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +       G R+ V     +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 232 DMPPAVWEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 284

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 118/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 27  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 86
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +     V  + G  P T F  C           V      +G  D++VNNA         
Sbjct: 87  NVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNASSFYPTPLL 138
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 139 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 198
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++     +
Sbjct: 199 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL---VD 250
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +       G R+ V     +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 251 DMPPAVWEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 303

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 118/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +     V  + G  P T F  C           V      +G  D++VNNA         
Sbjct: 71  NVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNASSFYPTPLL 122
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 123 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 182
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++     +
Sbjct: 183 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL---VD 234
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +       G R+ V     +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 235 DMPPAVWEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 118/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G S     H  G  VC+                            AD+ 
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +     V  + G  P T F  C           V      +G  D++VNNA         
Sbjct: 108 NVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNASSFYPTPLL 159
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 160 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 219
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++     +
Sbjct: 220 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL---VD 271
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +       G R+ V     +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 272 DMPPAVWEGHRSKVP----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 17/264 (6%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFF--C 71
           +L G+ AL+TG   GIG++        GA V I    ++N+ + + +     PD      
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKG 130
             D+  E+  C  V   +EK+  +DI++NN GI       DI + D   + K+F++N+  
Sbjct: 67  VADLGTEQG-CQDV---IEKYPKVDILINNLGIFEPVEYFDIPDED---WFKLFEVNIXS 119
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
                +   +  I + +G +I I S A          Y+ +K   L L++++A       
Sbjct: 120 GVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTN 179
Query: 191 IRVNCVSP-----YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
           + VN + P       V T L   +  E+   E+A   F     R  ++    +   ++A+
Sbjct: 180 VTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXK-ENRPTSIIQRLIRPEEIAH 238
Query: 246 AVLFLASDEARYISGTNLMVDGGF 269
            V FL+S  +  I+G+ L +DGG 
Sbjct: 239 LVTFLSSPLSSAINGSALRIDGGL 262

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---------GQQVCQSLGGE 65
           R  GRV L+TG   G+G +    F + GA V + D+  +            +V + +   
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 66  PDTFFCHCDVTK--EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS----- 118
                 + D  +  E+ V +A+D     FG +D++VNNAGI       +R+   S     
Sbjct: 66  GGKAVANYDSVEAGEKLVKTALDT----FGRIDVVVNNAGI-------LRDRSFSRISDE 114
Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           +++ +  ++++G F   + A      Q  G II   S +G  G  G   Y+ +K  +LGL
Sbjct: 115 DWDIIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGL 174
Query: 179 NKNVAAELGKYGIRVNCVSPYA 200
              +  E  K  I  N ++P A
Sbjct: 175 ANTLVIEGRKNNIHCNTIAPNA 196

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 92  FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTII 151
            G LDI+VNNAG+       I E   +++     +NV+  F   + A  +      G I+
Sbjct: 92  LGRLDIVVNNAGVISRG--RITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIV 149
Query: 152 SICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP 211
           ++ S  G   G G   Y  +K A+  L +    +    GIR+N V P  V T        
Sbjct: 150 NVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFA 209
Query: 212 EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
           +     D  V     + R   + G      D+A+ VLFLASD ARY+ G+ + V+GG
Sbjct: 210 KRGFDPDRAVAE---LGRTVPL-GRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG 262

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 116/297 (39%), Gaps = 66/297 (22%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI----------------------------ADVQ 51
           VAL+TG A  +G       H  G  VC+                            AD+ 
Sbjct: 8   VALVTGAAKRLGSGIAEGLHAEGYAVCLHYHRSAAEANTLAATLNARRPNSAIPVQADLS 67
Query: 52  DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI------- 104
           +        + G  P T F  C      D+ +A       +G  D++VNNA         
Sbjct: 68  NVAKAPAGGADGAAPVTLFKRC-----ADLVAAC---YTHWGRCDVLVNNASSFYPTPLL 119
Query: 105 -----SGAPCPDIREADLSEFEKVFDINVKGVFHGMK---HAARIMIPQTKGTIISICSV 156
                   PC   REA  +    +F  N    +  +K   H       + +GT  SI ++
Sbjct: 120 RKDEDGHVPCVGDREAMEAAAADLFGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNM 179
Query: 157 AGAIGG---LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE 213
             A+     LG   YT +K A+ GL ++ A EL    IRVN V P     GL++      
Sbjct: 180 VDAMTSQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVL----- 229
Query: 214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
              +D     R        +   + +A +V++ V+FL S +A+Y++GT + VDGG++
Sbjct: 230 --ADDMPPAVREDYRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYS 284

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQQVCQSLGGEPDTFFC-HCDVT 76
           +V L+TG ++G G +        G  V   A   + L   V       PD       DVT
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----PDRAEAISLDVT 61
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             E +       + ++G +D++VNNAG +        E    E   +F+++V     G  
Sbjct: 62  DGERIDVVAADVLARYGRVDVLVNNAGRTQVGA--FEETTERELRDLFELHV----FGPA 115
Query: 137 HAARIMIPQTK----GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              R ++PQ +    G++++I S  G +   G  AY+ +K A+  L++ +A E+  +GI+
Sbjct: 116 RLTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIK 175
Query: 193 VNCVSPYAVATGL---ALAHLPEE 213
           V  V P A  T L     A+  EE
Sbjct: 176 VLIVEPGAFRTNLFGKGAAYFSEE 199

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHC 73
           G+VA ITGG TG+G+    L    GA+  IA    DV     +Q+    G +       C
Sbjct: 26  GKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAI--QC 83
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV-F 132
           DV   + V + V   ++  G  +I++NNA  +G           + ++ + DI + G  F
Sbjct: 84  DVRDPDXVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAF 141
Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++   +++  Q     +SI ++    G         +K  V   +K++AAE GKYG R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXR 201
Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            N + P  + T  A + L      E   +G R    R         T  ++AN   FL S
Sbjct: 202 FNVIQPGPIKTKGAFSRLDPTGTFEKEXIG-RIPCGRLG-------TVEELANLAAFLCS 253
Query: 253 DEARYISGTNLMVDGG 268
           D A +I+G  +  DGG
Sbjct: 254 DYASWINGAVIKFDGG 269

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 24/264 (9%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKV--CIADVQDNLGQQ--VCQSLGGEPDTFFCHCDV 75
           VA++TGG++GIG +TV L  + GA V  C  D +     +  + Q   G    F   CDV
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGA-RLFASVCDV 68
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF----EKVFDINVKGV 131
                V +  +      G   I+VNNAG          +  +S F    ++ +   ++  
Sbjct: 69  LDALQVRAFAEACERTLGCASILVNNAG----------QGRVSTFAETTDEAWSEELQLK 118
Query: 132 FHGMKHAARIMIPQ--TKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELG 187
           F  + H  R  +PQ  ++     +C  +       PH  A + ++  V  L +++A E  
Sbjct: 119 FFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFA 178
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANA 246
             G+RVN +    V +G         E  E     +   +ARN  +    L    + A A
Sbjct: 179 PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARA 238
Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
           +LFLAS  + Y +G+++ V GG +
Sbjct: 239 ILFLASPLSAYTTGSHIDVSGGLS 262

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQ---QVCQSLGGEPDTFFCHCDV 75
           +A+ITG + GIG          G +V  IA  + NL +   ++ +S     +      D+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 76  TKEEDVCSAVDLTV----EKFGTLDIMVNNAGISGAPCPDIREADLSE----FEKVFDIN 127
           T     C+  D  +    +K+G +DI+VN A           +  LSE    F K+ +IN
Sbjct: 69  TD----CTKADTEIKDIHQKYGAVDILVNAAAX-------FXDGSLSEPVDNFRKIXEIN 117
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           V   +  +K    I   Q  G I ++ S A   G      Y  +K A+LGL +++  EL 
Sbjct: 118 VIAQYGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELA 177
Query: 188 KYGIRVNCVSPYAVATGLA 206
             GIRV  + P  V T  A
Sbjct: 178 PLGIRVTTLCPGWVNTDXA 196

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF--CHCDV 75
           GR+AL+TGG TG+G    +     G  V I   + ++       +GG          CDV
Sbjct: 33  GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV 92
Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              + V +       +F  LD++VNNAG +  P P + E    ++  +   N+ G F   
Sbjct: 93  GDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVP-LEEVTFEQWNGIVAANLTGAFLCT 151
Query: 136 KHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
           +HA R    QT   G II+  S++          YT +KHA+ GL K+ A
Sbjct: 152 QHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTA 201

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +VA+ITG + GIGE+  R   + G  + +     D  + +  ++ Q  G E   F+ H D
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYHHLD 60
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI 104
           V+K E V       +E+FG +D++V NAG+
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +VA+ITG + GIGE+  R   + G  + +     D  + +  ++ Q  G E   F+ H D
Sbjct: 25  KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYHHLD 82
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI 104
           V+K E V       +E+FG +D++V NAG+
Sbjct: 83  VSKAESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 31/217 (14%)
Query: 20  VALITGGATGIGESTVRLF------HKHGAKVCI------ADVQDNLGQQVCQSLGGEPD 67
           + LITG   GIG +    F      H     V +      AD++    +  C++ G   D
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLE--CRAEGALTD 61
Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFD 125
           T     D++   DV       VE++G +D +VNNAG+   GA   D+ E D   F+   +
Sbjct: 62  TI--TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA-LSDLTEED---FDYTMN 115
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
            N+KG F   +    +M  Q  G I  I SVA          Y  SK    GL + +   
Sbjct: 116 TNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLY 175
Query: 186 LGKYGIRVNCVSPYAVATGL---------ALAHLPEE 213
             K  +R+  V P AV T +         AL  +PE+
Sbjct: 176 ARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPED 212

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 116/273 (42%), Gaps = 46/273 (16%)
Query: 23  ITGGATGIGESTVRLFHKHGAKVC-----IADVQDNL----GQQ-----VCQSLGGEPDT 68
           ITG A+GIG +   L  + G  V       AD++ +L    G++     V    GG  D 
Sbjct: 6   ITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDG 65
Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
             C          C+ V +T    G L + VN  G+S A    + EA LS  ++   + V
Sbjct: 66  LVC----------CAGVGVTAANSG-LVVAVNYFGVS-ALLDGLAEA-LSRGQQPAAVIV 112
Query: 129 KGVFHGMKHAARI-----MIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNV 182
             +      AA +     M+   +   I +    G       H AY GSK+AV  L +  
Sbjct: 113 GSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQT-----HLAYAGSKYAVTCLARRN 167
Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
             +    G+R+N V+P AV T L  A   +    E      R FVA     +G+E    +
Sbjct: 168 VVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGEST----RRFVAPLG--RGSE--PRE 219
Query: 243 VANAVLFLASDEARYISGTNLMVDGGFTSVNHS 275
           VA A+ FL   +A +I G+ L VDGG  ++  +
Sbjct: 220 VAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 108/261 (41%), Gaps = 21/261 (8%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           L G+ ALIT G  G G +TV LF + GA+V   A  +            G P+  F   D
Sbjct: 9   LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEAD 58
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +T +E      + T ++ G +D++V+  G S A           ++     +N+      
Sbjct: 59  LTTKEGCAIVAEATRQRLGGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRL 118
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN---KNVAAELGKYGI 191
            +      + +  G ++ + S+   +    P + T    A   L+   K  + E+   G+
Sbjct: 119 DRQLVPDXVARGSGVVVHVTSIQRVLPL--PESTTAYAAAKAALSTYSKAXSKEVSPKGV 176
Query: 192 RVNCVSPYAVAT--GLALAHLPEEERTEDAMVGFRNFVARNAN--MQGTELTANDVANAV 247
           RV  VSP  + T   + LA    ++   D + G +  +         G      +VAN +
Sbjct: 177 RVVRVSPGWIETEASVRLAERLAKQAGTD-LEGGKKIIXDGLGGIPLGRPAKPEEVANLI 235
Query: 248 LFLASDEARYISGTNLMVDGG 268
            FLASD A  I+G    +DGG
Sbjct: 236 AFLASDRAASITGAEYTIDGG 256

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 26/264 (9%)
Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQ--SLGGEPDTFFCHCD 74
           G++A++T G++G+G ++     ++GA++ + +  ++ L     +  SL           D
Sbjct: 7   GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGD 66
Query: 75  VTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKG 130
           + +  D+    D   EK    G  DI+V +   +G P P    E  + ++++ + +  + 
Sbjct: 67  IREPGDI----DRLFEKARDLGGADILVYS---TGGPRPGRFMELGVEDWDESYRLLARS 119
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG----SKHAVLGLNKNVAAEL 186
                + AA  M+ +  G ++ I    G++  L P          +  V+G+ + +A EL
Sbjct: 120 AVWVGRRAAEQMVEKGWGRMVYI----GSVTLLRPWQDLALSNIMRLPVIGVVRTLALEL 175
Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV--GFRNFVARNANMQGTELTANDVA 244
             +G+ VN V P  + T    +   E  R     V    ++  +R     G      ++A
Sbjct: 176 APHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIP--MGRVGKPEELA 233
Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           + V FLAS++A +I+G  + VDGG
Sbjct: 234 SVVAFLASEKASFITGAVIPVDGG 257

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF 226
           AY GSK+A+    +  AA  G+ G+R+N ++P A  T L  A L ++ R  +++  F   
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL-QDPRYGESIAKFVPP 212
Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           + R A         +++A+ + FL S  A Y+ G  +++DGG  +V
Sbjct: 213 MGRRAE-------PSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 25/263 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-H 72
           L G+  LI G A    I     +     GA++     Q    ++  + L  E   F C H
Sbjct: 12  LYGKRGLILGLANNRSIAWGIAKTASSAGAELAFT-YQGEAXKKRVEPLAEEVKGFVCGH 70
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
           CDV+    + +  +   +K+G LD +V+  G S       R  D+SE  F    +I+V  
Sbjct: 71  CDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVYS 130
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
           +    K A ++      G+I+++ +  GA   +  +   G   A L  + K +A +LG  
Sbjct: 131 LTALTKRAEKLX--SDGGSILTL-TYYGAEKVVPNYNVXGVAKAALEASVKYLAVDLGPK 187
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR---NANMQGTELTANDVANA 246
            IRVN +S   + T LA + + +          FR  +     NA ++ T +T  +V ++
Sbjct: 188 HIRVNAISAGPIKT-LAASGIGD----------FRYILKWNEYNAPLRRT-VTIEEVGDS 235
Query: 247 VLFLASDEARYISGTNLMVDGGF 269
            L+L SD +R ++G    VD G+
Sbjct: 236 ALYLLSDLSRSVTGEVHHVDSGY 258

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 35/209 (16%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----------Q 60
           P   RL G    ITG + GIG++      K GA + IA        ++           +
Sbjct: 38  PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 97
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           ++GG+     C  DV  E+ + +AV+  ++KFG +DI+VNNA  S     +  +      
Sbjct: 98  AVGGK--ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNA--SAISLTNTLDTPTKRL 153
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIIS-ICSVAGAIGGLGP-----H-AYTGSKH 173
           + + ++N +G +     A++  IP  K + ++ I +++  +  L P     H AYT +K+
Sbjct: 154 DLMMNVNTRGTY----LASKACIPYLKKSKVAHILNISPPL-NLNPVWFKQHCAYTIAKY 208
Query: 174 A----VLGLNKNVAAELGKYGIRVNCVSP 198
                VLG+ +    E     I VN + P
Sbjct: 209 GMSMYVLGMAEEFKGE-----IAVNALWP 232

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 16/208 (7%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----------GGE 65
           L G+   ITG + GIG +      + GA V IA        ++  ++          GG+
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                  CD+ +E+ V +AV  TV+ FG +DI+VNNA  S        +     F+    
Sbjct: 64  --GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNA--SAIWLRGTLDTPXKRFDLXQQ 119
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPH-AYTGSKHAVLGLNKNVA 183
           +N +G F   +     ++      I+++           G H  YT +K     +   +A
Sbjct: 120 VNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLA 179
Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLP 211
           AE G  G+ +N + P  V    A+  LP
Sbjct: 180 AEFGPQGVAINALWPRTVIATDAINXLP 207

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 20  VALITGGATGIGESTVR-LFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTK 77
           VAL+TGG  GIG + VR L       V +       GQ   Q L  E     F   D+  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            + + +  D   +++G LD++VNNAGI+       + AD + F    ++ +K  F G + 
Sbjct: 66  LQSIRALRDFLRKEYGGLDVLVNNAGIA------FKVADPTPFHIQAEVTMKTNFFGTRD 119
Query: 138 AARIMIP--QTKGTIISICSV 156
               ++P  + +G ++++ S+
Sbjct: 120 VXTELLPLIKPQGRVVNVSSI 140

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 37/268 (13%)
Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN----LGQQV------CQSLGGE 65
           L GR AL+TG + GIG +        GA V +  V+      + Q++       Q L G+
Sbjct: 31  LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                   D+ +  +  + VD+ V         +N +    A    +   DL+ F+    
Sbjct: 91  LSEAGAGTDLIERAEAIAPVDILV---------INASAQINATLSALTPNDLA-FQ--LA 138
Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKN 181
           +N+      ++ A   M+ +  G ++SI    G+I  L P     AY  +K A   L ++
Sbjct: 139 VNLGSTVDMLQSALPKMVARKWGRVVSI----GSINQLRPKSVVTAYAATKAAQHNLIQS 194
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
            A +     + +N ++P     GL       + R +D   G+  +V R  N  G      
Sbjct: 195 QARDFAGDNVLLNTLAP-----GLVDTDRNADRRAQDPE-GWDEYV-RTLNWMGRAGRPE 247
Query: 242 DVANAVLFLASDEARYISGTNLMVDGGF 269
           ++  A LFLAS+   +++G  + + GG+
Sbjct: 248 EMVGAALFLASEACSFMTGETIFLTGGY 275

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 20  VALITGGATGIGESTVR-LFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTK 77
           VAL+TGG  GIG + VR L       V +       GQ   Q L  E     F   D+  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            + + +  D   +++G LD++VNNAGI+       + AD + F    ++ +K  F G + 
Sbjct: 66  LQSIRALRDFLRKEYGGLDVLVNNAGIA------FKVADPTPFHIQAEVTMKTNFFGTRD 119
Query: 138 AARIMIP--QTKGTIISICSV 156
               ++P  + +G ++++ S+
Sbjct: 120 VCTELLPLIKPQGRVVNVSSI 140

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--QQVCQSLGGEPDTFFCHCD 74
           +G+V L+TG + GIG+S V +         +  V  +    +++ +  G     F+   D
Sbjct: 1   MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDR--FFYVVGD 58
Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +T++  +   V+  V+  G +D +V NAG+   P  ++ E D++ ++K++DIN    F  
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVL-EPVQNVNEIDVNAWKKLYDIN----FFS 113
Query: 135 MKHAARIMIPQ---TKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
           +     I +P+   T G ++ + S A  +      AY  SK A+
Sbjct: 114 IVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAAL 157

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 21/261 (8%)
Query: 16  LVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFF 70
           L G+ AL+ G      +G +      + GA+V ++   + L    +++ ++LGG      
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG---ALL 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT++E++ +      E FG LD +V+    +     + R  D    + +  + V  
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA 122
Query: 131 VFHGMKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
             + +   AR   P  +  G I+++   A        +    +K A+    + +A ELG 
Sbjct: 123 --YSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGP 180
Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            G+RVN +S   V T  A        R+        + VA+ A ++   +T  +V N  L
Sbjct: 181 KGVRVNAISAGPVRTVAA--------RSIPGFTKMYDRVAQTAPLR-RNITQEEVGNLGL 231
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL S  A  I+G  + VD G+
Sbjct: 232 FLLSPLASGITGEVVYVDAGY 252

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 16  LVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFF 70
           L G+ AL+ G      +G +      + GA+V ++   + L    +++ ++LGG      
Sbjct: 6   LSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG---ALL 62
Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT++E++ +      E FG LD +V+    +     + R  D    + +  + V  
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAXEGRYIDTRRQDWLLALEVSA 122
Query: 131 VFHGMKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
             + +   AR   P  +  G I+++   A        +    +K A+    + +A ELG 
Sbjct: 123 --YSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVXAIAKAALEASVRYLAYELGP 180
Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            G+RVN +S   V T +A   +P   +  D        VA+ A ++   +T  +V N  L
Sbjct: 181 KGVRVNAISAGPVRT-VAARSIPGFTKXYDR-------VAQTAPLR-RNITQEEVGNLGL 231
Query: 249 FLASDEARYISGTNLMVDGGF 269
           FL S  A  I+G  + VD G+
Sbjct: 232 FLLSPLASGITGEVVYVDAGY 252

>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 57/312 (18%)
Query: 16  LVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGGEPDTFFC 71
           L G+ A + G A   G G +  +L    GA+V +       ++ ++  +S   E D+F+ 
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66
Query: 72  HCDVTK--EEDVCSAVDLTVEKFGTLDIMVNN--------------AGISGAPCPDIREA 115
               +K   E     VDL  +K   LD + +               AG+ G    ++ EA
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEA 126
Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--------- 166
             ++  ++ DI V  + +G +    ++    KG + ++ S + +   L  H         
Sbjct: 127 VRADVGQI-DILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGG 185
Query: 167 -----AYTGSKHAVLGLN--------------KNVAAELGK-YGIRVNCVS--PYAVATG 204
                +Y  S+  + G                + +A E G+   +RVNC+S  P      
Sbjct: 186 SALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAA 245
Query: 205 LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLM 264
            A+    ++   + A+    ++   NA +Q  EL ++DV  A LFL S  AR ++G  L 
Sbjct: 246 SAIGKAGDKTFIDLAI----DYSEANAPLQ-KELESDDVGRAALFLLSPLARAVTGATLY 300
Query: 265 VDGGFTSVNHSL 276
           VD G  ++  +L
Sbjct: 301 VDNGLHAMGQAL 312

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 103/257 (40%), Gaps = 17/257 (6%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGG-EPDTFFCHCDVTK 77
           VA++TGG  GIG    R     G  + I  + D  G   V   L G      F   D+  
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD 90
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
                + VD  V +FG +D +VNNAGI+     D  +     F+ +  +N++G     + 
Sbjct: 91  LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQA 150
Query: 138 AARIMI---PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
             +  +    +   +II+I SV+          Y  SK  +   ++ +A  L + GI V 
Sbjct: 151 VLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGIAVF 210
Query: 195 CVSPYAVATGLALAHLPEEE-RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
            V P  + +    A   + +   E  +V  R +               D+ N V  LA  
Sbjct: 211 EVRPGIIRSDXTAAVSGKYDGLIESGLVPXRRWG-----------EPEDIGNIVAGLAGG 259
Query: 254 EARYISGTNLMVDGGFT 270
           +  + +G+ +  DGG +
Sbjct: 260 QFGFATGSVIQADGGLS 276

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 62
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKG 130
           DV ++  + +      + +   D  V++ G +     D   +       F+   DI+   
Sbjct: 63  DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 122
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
            F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G  
Sbjct: 123 -FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVANAV 247
           G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N+ 
Sbjct: 180 GVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGNSA 228
Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            FL SD +  ISG  + VDGGF+
Sbjct: 229 AFLCSDLSAGISGEVVHVDGGFS 251

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 66
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKG 130
           DV ++  + +      + +   D  V++ G +     D   +       F+   DI+   
Sbjct: 67  DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 126
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
            F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G  
Sbjct: 127 -FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 183
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVANAV 247
           G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N+ 
Sbjct: 184 GVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGNSA 232
Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            FL SD +  ISG  + VDGGF+
Sbjct: 233 AFLCSDLSAGISGEVVHVDGGFS 255

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 107/263 (40%), Gaps = 22/263 (8%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 63
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKG 130
           DV ++  + +      + +   D  V++ G +     D   +       F+   DI+   
Sbjct: 64  DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 123
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
            F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G  
Sbjct: 124 -FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 180
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVANAV 247
           G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N+ 
Sbjct: 181 GVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGNSA 229
Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            FL SD +  ISG  + VDGGF+
Sbjct: 230 AFLCSDLSAGISGEVVHVDGGFS 252

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGE-PDTFFCHCDVT 76
           RVAL+TG   GIG + VR   +  A   +   +D   GQ   + L  E     F   D+ 
Sbjct: 5   RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDII 64
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             + + +  D   +++G LD++VNNA I+       +  + + F    ++ +K  F G +
Sbjct: 65  DLQSIRALCDFLRKEYGGLDVLVNNAAIA------FQLDNPTPFHIQAELTMKTNFMGTR 118
Query: 137 HAARIMIP--QTKGTIISICSVAG 158
           +    ++P  + +G ++++ S  G
Sbjct: 119 NVCTELLPLIKPQGRVVNVSSTEG 142

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV--CQSLGG-----EPDTFFC 71
           ++ LITG ++G G  T       G +V  A  +D +G+     +++ G     + D    
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRVY-ASXRDIVGRNASNVEAIAGFARDNDVDLRTL 64
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA-----GISGAPCPDIREADLSEFEKVFDI 126
             DV  +  V  A+D  + + G +D++++NA     G + A  P+       +F +++DI
Sbjct: 65  ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPE-------QFAELYDI 117
Query: 127 NVKGVFHGMKHAARIMIP----QTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNK 180
           NV       +   R  +P    Q  G +I I S + A GG  P+   Y  +K A   +  
Sbjct: 118 NVLST----QRVNRAALPHXRRQKHGLLIWISSSSSA-GGTPPYLAPYFAAKAAXDAIAV 172
Query: 181 NVAAELGKYGIRVNCVSPYAVATG 204
             A EL ++GI  + + P A  +G
Sbjct: 173 QYARELSRWGIETSIIVPGAFTSG 196

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 25/263 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-H 72
           L G+  LI G A    I     +   + GA++      D L ++V + L  E   F   H
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGH 87
Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
           CDV     + +  +   +K+G LD +V+  G S       R  D SE  F     I+V  
Sbjct: 88  CDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYS 147
Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKY 189
           +    + A ++M     G+I+++ +  GA   +  +   G   A L  + K +A +LG  
Sbjct: 148 LTAVSRRAEKLM--ADGGSILTL-TYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQ 204
Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR---NANMQGTELTANDVANA 246
            IRVN +S   + T LA + + +          FR  +     NA ++ T +T ++V + 
Sbjct: 205 NIRVNAISAGPIKT-LAASGIGD----------FRYILKWNEYNAPLRRT-VTIDEVGDV 252
Query: 247 VLFLASDEARYISGTNLMVDGGF 269
            L+  SD +R ++G     D G+
Sbjct: 253 GLYFLSDLSRSVTGEVHHADSGY 275

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 63
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP----DIREADLSE-FEKVFDINV 128
           DV ++  + +      + +   D  V++  IS AP      D   A   E F+   DI+ 
Sbjct: 64  DVAEDASIDTMFAELGKVWPKFDGFVHS--ISFAPGDQLDGDYVNAVTREGFKIAHDISS 121
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELG 187
              F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G
Sbjct: 122 YS-FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 178
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVAN 245
             G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N
Sbjct: 179 PEGVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGN 227
Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
           +  FL SD +  ISG  + VDGGF+
Sbjct: 228 SAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 29/195 (14%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +    +   Q+V   C  LG       
Sbjct: 5   EMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAAS---- 60
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEF------- 120
            H      ED+  A    V+     G LD+++ N          I +  LS F       
Sbjct: 61  AHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILN---------HITQTSLSLFHDDIHSV 111
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            +V ++N    +  M  AA  M+ Q+ G+I  I S+AG +       Y+ SK A+ G   
Sbjct: 112 RRVMEVNFLS-YVVMSTAALPMLKQSNGSIAVISSLAGKVTYPMVAPYSASKFALDGFFS 170
Query: 181 NVAAELGKYGIRVNC 195
            +  EL  Y  +VN 
Sbjct: 171 TIRTEL--YITKVNV 183

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +    +   Q+V   C  LG       
Sbjct: 14  EMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAAS---- 69
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A    V+     G LD+++ N  I+        + D+    +V ++N
Sbjct: 70  AHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILN-HITQTSLSLFHD-DIHSVRRVMEVN 127
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  M  AA  M+ Q+ G+I  I S+AG +       Y+ SK A+ G    +  EL 
Sbjct: 128 FLS-YVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTEL- 185
Query: 188 KYGIRVNC 195
            Y  +VN 
Sbjct: 186 -YITKVNV 192

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKV--------CIADVQDNLGQQVC 59
           D S   + L GRV L+TG A GIG +  R +  HGA V         +A+V D +     
Sbjct: 4   DYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS--- 60
Query: 60  QSLGGEPDTFFCHCDV-----TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE 114
               G+P       ++      +  ++ + V+    +FG LD +++NA I G   P + +
Sbjct: 61  ---AGQPQPLIIALNLENATAQQYRELAARVE---HEFGRLDGLLHNASIIGPRTP-LEQ 113
Query: 115 ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA 174
               +F +V  +NV   F   +    ++      +I    S  G  G     AY  SK A
Sbjct: 114 LPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFA 173
Query: 175 VLGLNKNVAAEL-GKYGIRVNCVSPYAVATGLALAHLPEE 213
             GL + +A EL G   +R N ++P A  TG      P+E
Sbjct: 174 TEGLXQTLADELEGVTAVRANSINPGATRTGXRAQAYPDE 213

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 23/215 (10%)
Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQV------CQ 60
           P    L G+   I+GG+ GIG +  +     GA V +    A+    L   +       +
Sbjct: 2   PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE 61
Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
             GG+        D+   + V +AV  TVE+FG +DI VNNA  S      I E  L  F
Sbjct: 62  EAGGQ--ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNA--SAINLGSIEEVPLKRF 117
Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGT----IISIC-SVAGAIGGLGPHAYTGSKHAV 175
           + +  I V+G +      ++  IP  KG     I+++   +      L P  Y  +K+ +
Sbjct: 118 DLMNGIQVRGTY----AVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGM 173
Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL 210
                 +A EL   GI  N + P       A+ +L
Sbjct: 174 TLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL 208

>pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRV 193
           ++H   IM        +S  +    + G G    + +K A+    + +A E G KYG+RV
Sbjct: 161 LQHFGPIMNEGGSAVTLSYLAAERVVPGYG-GGMSSAKAALESDTRTLAWEAGQKYGVRV 219
Query: 194 NCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           N +S  P       A+    E+   + A+    ++   NA ++  +L ++DV  A LFL 
Sbjct: 220 NAISAGPLKSRAASAIGKSGEKSFIDYAI----DYSYNNAPLR-RDLHSDDVGGAALFLL 274
Query: 252 SDEARYISGTNLMVDGGFTSVNHSL 276
           S  AR +SG  L VD G  ++  ++
Sbjct: 275 SPLARAVSGVTLYVDNGLHAMGQAV 299

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 45/274 (16%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFC 71
           L GR  ++ G A    I     R  H+ GA++      + L + V +  G     D+   
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL 64
Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CDVT + ++ +      E+ G +       GI+       +E  + E+    + N  G 
Sbjct: 65  PCDVTNDAEIETCFASIKEQVGVIH------GIAHCIAFANKEELVGEY---LNTNRDGF 115
Query: 132 F--HGMK--------HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
              H +          AAR M+ +  G+I+++  + G +     +    +K ++    K 
Sbjct: 116 LLAHNISSYSLTAVVKAARPMMTE-GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKY 174
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF------VARNANMQG 235
           +AA+LGK  IRVN +S   +             RT  A  G  +F      +   A ++ 
Sbjct: 175 LAADLGKENIRVNSISAGPI-------------RTLSAK-GISDFNSILKDIEERAPLRR 220
Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           T  T  +V +   FL SD +R I+G NL VD GF
Sbjct: 221 TT-TPEEVGDTAAFLFSDMSRGITGENLHVDSGF 253

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 63
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP----DIREADLSE-FEKVFDINV 128
           DV ++  + +      + +   D  V++  I+ AP      D   A   E F+   DI+ 
Sbjct: 64  DVAEDASIDTMFAELGKVWPKFDGFVHS--IAFAPGDQLDGDYVNAVTREGFKIAHDISS 121
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELG 187
              F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G
Sbjct: 122 YS-FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 178
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVAN 245
             G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N
Sbjct: 179 PEGVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGN 227
Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
           +  FL SD +  ISG  + VDGGF+
Sbjct: 228 SAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine Length = 296

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
           V  A +   + FG++DI+V++ G        + E     +      +       + H   
Sbjct: 105 VQEAAECVRQDFGSIDILVHSLGNGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP 164
Query: 141 IMIPQTKGTIISICSVAGA--IGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVS 197
           IM P   G  IS+  +A    I G G    + +K A+    + +A E G K  IRVN +S
Sbjct: 165 IMNP--GGASISLTYIASERIIPGYG-GGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS 221
Query: 198 --PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
             P       A+  +       D M+    +   NA +Q T LTA++V NA  FL S  A
Sbjct: 222 AGPLGSRAAKAIGFI-------DTMI---EYSYNNAPIQKT-LTADEVGNAAAFLVSPLA 270
Query: 256 RYISGTNLMVDGGFTSVNHSL 276
             I+G  + VD G  S+  +L
Sbjct: 271 SAITGATIYVDNGLNSMGVAL 291

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 33/271 (12%)
Query: 13  VQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD 67
           ++ L G+  ++ G A    I     R  H  GAK+      + L + V     +L G+ +
Sbjct: 1   MELLQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQ-E 59
Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLD------IMVNNAGISGAPCPDIREADLSEFE 121
           +    CDVT +E++ +  +   ++ GT+          N   + G      R+     F 
Sbjct: 60  SLVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDG----FL 115
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
              +I+   +    + A ++M     G I+++  + G       +    +K ++    K 
Sbjct: 116 LAQNISAFSLTAVAREAKKVMTE--GGNILTLTYLGGERVVKNYNVMGVAKASLEASVKY 173
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG---TEL 238
           +A +LG++GIRVN +S   + T  A              VG  N + R    +       
Sbjct: 174 LANDLGQHGIRVNAISAGPIRTLSAKG------------VGDFNSILREIEERAPLRRTT 221
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGF 269
           T  +V +  +FL SD AR ++G N+ VD G+
Sbjct: 222 TQEEVGDTAVFLFSDLARGVTGENIHVDSGY 252

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 20/204 (9%)
Query: 78  EEDVCSAVDLTVEKFGTLDIMVNN--AGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           E++    ++      G +DI+V+N  A +   P       D  +  +   I    + + +
Sbjct: 56  EQEPVELIEAVTSALGHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKPFALANAV 115
Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPH----AYTGSKHAVLGLNKNVAAELGKYGI 191
              A  M  +  G II I S A      GP      Y  ++     L   ++ ELG++ I
Sbjct: 116 ---ASQMKRRKSGHIIFITSAAS----FGPWKELSTYASARAGASALANALSKELGEHNI 168
Query: 192 RVNCVSPYAVATGLALAHLPEEE-RTEDAMVGF-RNFVARNANMQGTELTANDVANAVLF 249
            V  ++P  V +G +  + P E  +T    V + R + A      GT+    ++   V F
Sbjct: 169 PVFAIAPNGVDSGDSPYYYPSEPWKTSPEHVAWVRKYTA--LQRLGTQ---KELGELVTF 223
Query: 250 LASDEARYISGTNLMVDGGFTSVN 273
           LAS    Y++G    + GGF  V 
Sbjct: 224 LASGSCDYLTGQVFWLAGGFPVVE 247

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 33/271 (12%)
Query: 13  VQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD 67
           ++ L G+  ++ G A    I     R  H  GAK+      + L + V     +L G+ +
Sbjct: 1   MELLQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQ-E 59
Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLD------IMVNNAGISGAPCPDIREADLSEFE 121
           +    CDVT +E++ +  +   ++ GT+          N   + G      R+     F 
Sbjct: 60  SLVLPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDG----FL 115
Query: 122 KVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
              +I+   +    + A ++M     G I+++  + G       +    +K ++    K 
Sbjct: 116 LAQNISAFSLTAVAREAKKVMTE--GGNILTLTYLGGERVVKNYNVMGVAKASLEASVKY 173
Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG---TEL 238
           +A +LG++GIRVN +S   + T  A              VG  N + R    +       
Sbjct: 174 LANDLGQHGIRVNAISAGPIRTLSAKG------------VGDFNSILREIEERAPLRRTT 221
Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGF 269
           T  +V +  +FL SD AR ++G N+ VD G+
Sbjct: 222 TQEEVGDTAVFLFSDLARGVTGENIHVDSGY 252

>pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG----MK 136
           V  A +   + FG++DI+V+    S A  P++ +  L    K +   +    +     + 
Sbjct: 106 VQEAAECVRQDFGSIDILVH----SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161
Query: 137 HAARIMIPQTKGTIISICSVAGA--IGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRV 193
           H   IM P   G  IS+  +A    I G G    + +K A+    + +A E G K  IRV
Sbjct: 162 HFLPIMNP--GGASISLTYIASERIIPGYG-GGMSSAKAALESDTRVLAFEAGRKQNIRV 218
Query: 194 NCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           N +S  P       A+  +       D M+    +   NA +Q T LTA++V NA  FL 
Sbjct: 219 NTISAGPLGSRAAKAIGFI-------DTMI---EYSYNNAPIQKT-LTADEVGNAAAFLV 267
Query: 252 SDEARYISGTNLMVDGGFTSVNHSL 276
           S  A  I+G  + VD G  S+  +L
Sbjct: 268 SPLASAITGATIYVDNGLNSMGVAL 292

>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG----MK 136
           V  A +   + FG++DI+V+    S A  P++ +  L    K +   +    +     + 
Sbjct: 116 VQEAAECVRQDFGSIDILVH----SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 171
Query: 137 HAARIMIPQTKGTIISICSVAGA--IGGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRV 193
           H   IM P   G  IS+  +A    I G G    + +K A+    + +A E G K  IRV
Sbjct: 172 HFLPIMNP--GGASISLTYIASERIIPGYG-GGMSSAKAALESDTRVLAFEAGRKQNIRV 228
Query: 194 NCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           N +S  P       A+  +       D M+    +   NA +Q T LTA++V NA  FL 
Sbjct: 229 NTISAGPLGSRAAKAIGFI-------DTMI---EYSYNNAPIQKT-LTADEVGNAAAFLV 277
Query: 252 SDEARYISGTNLMVDGGFTSVNHSL 276
           S  A  I+G  + VD G  S+  +L
Sbjct: 278 SPLASAITGATIYVDNGLNSMGVAL 302

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 65
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 66  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 123
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 124 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 180
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 181 -YSVSRVNV 188

>pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 169 TGSKHAVLGLNKNVAAELG-KYGIRVNCVS--PYAVATGLALAHLPEEERTEDAMVGFRN 225
           + +K A+    + +A E G KYG+RVN +S  P       A+    E+   + A+    +
Sbjct: 194 SSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAI----D 249
Query: 226 FVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           +   NA ++  +L ++DV  A LFL S  AR +SG  L VD G 
Sbjct: 250 YSYNNAPLR-RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 79
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 80  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 137
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 138 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 194
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 195 -YSVSRVNV 202

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 11  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 66
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 67  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 124
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 125 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 181
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 182 -YSVSRVNV 189

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 30  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 85
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 86  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 143
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 144 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE-- 200
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 201 -YSVSRVNV 208

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 13  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 68
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 69  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 126
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 127 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 183
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 184 -YSVSRVNV 191

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 20  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 75
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 76  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 133
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 134 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 190
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 191 -YSVSRVNV 198

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 26/265 (9%)
Query: 16  LVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+  L+TG A+   I     +  H+ GA++      D L  +V +            C
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 63
Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP----DIREADLSE-FEKVFDINV 128
           DV ++  + +      + +   D  V++  I  AP      D   A   E F+   DI+ 
Sbjct: 64  DVAEDASIDTMFAELGKVWPKFDGFVHS--IVFAPGDQLDGDYVNAVTREGFKIAHDISS 121
Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELG 187
              F  M  A R M+    G+ +   S  GA   +  +   G   A L  N + +A  +G
Sbjct: 122 YS-FVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 178
Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVAN 245
             G+RVN +S   + T LA + + +          FR  +A    +      +T  DV N
Sbjct: 179 PEGVRVNAISAGPIRT-LAASGIKD----------FRKMLAHCEAVTPIRRTVTIEDVGN 227
Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
           +  FL SD +  ISG  + VDGGF+
Sbjct: 228 SAAFLCSDLSAGISGEVVHVDGGFS 252

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 5   EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 60
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 61  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 118
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 119 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 175
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 176 -YSVSRVNV 183

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 30  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 85
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 86  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 143
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 144 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE-- 200
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 201 -YSVSRVNV 208

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 65
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 66  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 123
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 124 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE-- 180
Query: 188 KYGI-RVNC 195
            Y + RVN 
Sbjct: 181 -YSVSRVNV 188

>pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) Reductase From Anaplasma Phagocytophilum At 1.9a Resolution Length = 296

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 99/235 (42%), Gaps = 21/235 (8%)
Query: 41  HGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI 97
            GA+V +  + +   ++V    +SLG +       CDV+  E V +   +  E++G+LD 
Sbjct: 55  QGAEVALTYLSETFKKRVDPLAESLGVK---LTVPCDVSDAESVDNMFKVLAEEWGSLDF 111
Query: 98  MVNNAGISGAPCPDIREAD--LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS 155
           +V+    S       R  D  L  F     I+     +    A  +M   T G  I   S
Sbjct: 112 VVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLM---TNGGSILTLS 168
Query: 156 VAGAIGGLGPHAYTGSKHAVLGLN-KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE 214
             GA   +  +   G   A L  + K +A +LGK  IRVN +S   V T LA + + +  
Sbjct: 169 YYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRT-LASSGISDFH 227
Query: 215 RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
                   + + + RN        T +DV  A L+L SD  R  +G  + VD G+
Sbjct: 228 YIL-TWNKYNSPLRRNT-------TLDDVGGAALYLLSDLGRGTTGETVHVDCGY 274

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 79
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 80  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSL-NLFHDDIHHVRKSMEVN 137
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 138 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 194
Query: 188 KYGI-RVN 194
            Y + RVN
Sbjct: 195 -YSVSRVN 201

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 27  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS---- 82
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A     +     G LD+++ N  I+     ++   D+    K  ++N
Sbjct: 83  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILN-HITNTSL-NLFHDDIHHVRKSMEVN 140
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
               +  +  AA  M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E  
Sbjct: 141 FLS-YVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE-- 197
Query: 188 KYGI-RVN 194
            Y + RVN
Sbjct: 198 -YSVSRVN 204

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 33/174 (18%)
Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDTFFCHCDVT 76
           R A++TGG  GIG    +    +G  V +       G +  + L      +  F   DVT
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVT 72
Query: 77  KE-EDVCSAVDLTVEKFGTLDIMVNNAGISG---------APCPDIREADLSEFEKVFDI 126
                + S  D     FG LDI+VNNAG++G         A   DI E D  E  K+++ 
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE-DSEELVKIYEK 131
Query: 127 N----------------VKGVFHGMKHAARIMIPQTKGT----IISICSVAGAI 160
                            +K  ++G+K    ++IP  + +    I+++ S  G++
Sbjct: 132 PEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSL 185

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 19  RVALITGGATGIGESTVR-LFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVT 76
           RVAL+TG   GIG +  R L  +    V +       GQ   Q L  E     F   D+ 
Sbjct: 3   RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDID 62
Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             + + +  D   +++G L+++VNNA ++       +  D   F+   ++ +K  F   +
Sbjct: 63  DLQSIRALRDFLRKEYGGLNVLVNNAAVA------FKSDDPMPFDIKAEMTLKTNFFATR 116
Query: 137 HAARIMIPQTK--GTIISICSV 156
           +    ++P  K  G +++I S+
Sbjct: 117 NMCNELLPIMKPHGRVVNISSL 138

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 7   EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAAS---- 62
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A +   E     G LD+++ N  +           ++    K  ++N
Sbjct: 63  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLT--FFHGEIDNVRKSMEVN 120
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
               F  +  AA  M+ Q++G+I  + SVAG I       Y+ SK A+ G    + +E 
Sbjct: 121 FHS-FVVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 178

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 5   EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAAS---- 60
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A +   E     G LD+++ N  +           ++    K  ++N
Sbjct: 61  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLT--FFHGEIDNVRKSMEVN 118
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
               F  +  AA  M+ Q++G+I  + SVAG I       Y+ SK A+ G    + +E 
Sbjct: 119 FHS-FVVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 176

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 7   EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAAS---- 62
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A +   E     G LD+++ N  +           ++    K  ++N
Sbjct: 63  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLT--FFHGEIDNVRKSMEVN 120
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
               F  +  AA  M+ Q++G+I  + SVAG I       Y+ SK A+ G    + +E 
Sbjct: 121 FHS-FVVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 178

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 99/266 (37%), Gaps = 71/266 (26%)
Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE 79
           V ++ GG +GIG    +        V +A  Q  L                   D++ E+
Sbjct: 8   VYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGL-------------------DISDEK 48
Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA 139
            V        E  G  D ++  AG S AP   + + ++++ +  FD    G     KH A
Sbjct: 49  SVYH----YFETIGAFDHLIVTAG-SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGA 103
Query: 140 RIM-----IPQTKG----TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           R +     I  T G     +++   V  AI             A+    K +A EL    
Sbjct: 104 RYLKQGGSITLTSGMLSRKVVANTYVKAAINA-----------AIEATTKVLAKELAP-- 150
Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL--------TAND 242
           IRVN +SP     GL      +    +D          R+A  Q T+          A+D
Sbjct: 151 IRVNAISP-----GLTKTEAYKGMNADD----------RDAMYQRTQSHLPVGKVGEASD 195
Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           +A A LF   +   Y++GT + VDGG
Sbjct: 196 IAMAYLFAIQNS--YMTGTVIDVDGG 219

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%)
Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           + L G+  ++TG + GIG        K GA V +        Q+V   C  LG       
Sbjct: 28  EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAAS---- 83
Query: 71  CHCDVTKEEDVCSAVDLTVEK---FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
            H      ED+  A +   E     G LD+++ N  +           ++    K  ++N
Sbjct: 84  AHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLT--FFHGEIDNVRKSMEVN 141
Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
               F  +  AA  M+ Q++G+I  + SVAG I       Y+ SK A+ G    + +E 
Sbjct: 142 FHS-FVVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 199

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	280
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-132
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-110
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-103
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-100
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-98
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-98
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-97
4dqx_A	277	Probable oxidoreductase protein; structural genomi	9e-97
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-94
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	6e-94
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-94
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-92
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	7e-91
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-90
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	4e-89
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	9e-88
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-87
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	6e-87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-86
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	9e-86
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-85
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-85
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-85
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	3e-84
1spx_A	278	Short-chain reductase family member (5L265); paral	6e-84
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-83
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-82
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-82
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-81
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	5e-81
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-80
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-80
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-80
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	7e-80
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	9e-80
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-79
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-79
1xhl_A	297	Short-chain dehydrogenase/reductase family member	8e-79
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-78
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	4e-78
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	7e-78
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	9e-78
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-77
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-77
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-77
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-77
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	4e-77
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	4e-77
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-77
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	7e-77
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-76
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-75
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	4e-74
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	7e-74
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	8e-74
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-73
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-73
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-73
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-73
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-73
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	7e-73
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-72
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-72
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-72
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-72
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-72
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-71
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-71
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-71
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	4e-71
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-71
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	7e-71
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-70
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-70
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-70
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	6e-70
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	7e-70
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-69
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-69
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-69
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-69
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-69
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	6e-69
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	8e-69
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-68
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-68
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-68
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	8e-67
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-66
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-66
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-66
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-66
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-66
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-66
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-65
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	8e-65
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-64
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-64
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-64
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-64
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-64
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-64
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-64
3rih_A	293	Short chain dehydrogenase or reductase; structural	4e-64
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-64
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-63
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-63
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-63
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	9e-63
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-62
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-62
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-62
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-62
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-62
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	8e-62
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-61
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	8e-61
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-60
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-60
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-60
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-60
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	4e-60
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-60
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	5e-60
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	5e-60
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	6e-60
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	8e-60
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-59
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-59
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	5e-59
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	6e-59
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-59
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-58
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-58
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-58
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-58
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-58
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-58
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-58
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-58
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	5e-58
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	5e-58
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-58
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-57
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-57
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	6e-57
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-56
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	7e-56
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-55
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-55
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-55
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-55
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	5e-55
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	9e-55
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-54
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-53
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	4e-53
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-52
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-52
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-52
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-52
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	7e-52
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-51
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	6e-51
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-50
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-49
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	5e-49
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-48
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	7e-48
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-47
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-46
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	6e-44
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	8e-45
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	6e-44
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	4e-40
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-38
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-37
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	6e-37
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-37
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-34
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	6e-27
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	4e-25
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-24
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	5e-24
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	4e-21
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	5e-21
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	7e-21
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	1e-20
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	2e-20
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	5e-20
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-19
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-19
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	2e-19
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-19
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	2e-19
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-15
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	1e-14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	2e-13
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	1e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-11
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	5e-10
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	1e-06

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  374 bits (964), Expect = e-132
 Identities = 131/277 (47%), Positives = 178/277 (64%), Gaps = 9/277 (3%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M ++++ DSS    RL  +VA+ITGGA GIGE+T +LF ++GAKV IAD+ D+ GQ+VC 
Sbjct: 1   MGSTSTPDSST--NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN 58

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           ++G      F HCDVTK+EDV + VD T+ K G LDIM  N G+       I EA   +F
Sbjct: 59  NIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF 118

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHAYTGSKHAVLGLN 179
           ++V DINV G F   KHAAR+MIP  KG+I+   S++    G G  H YT +KHAVLGL 
Sbjct: 119 KRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLT 178

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
            ++  ELG+YGIRVNCVSPY VA+ L       +    + +        + AN++GT L 
Sbjct: 179 TSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEEL------AHQAANLKGTLLR 232

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSL 276
           A DVA+AV +LA DE++Y+SG NL++DGG+T  N + 
Sbjct: 233 AEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAF 269

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  318 bits (817), Expect = e-110
 Identities = 94/258 (36%), Positives = 136/258 (52%), Gaps = 20/258 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VAL++GGA G+G S VR     GAKV   D+ D  G+ +   L       + H 
Sbjct: 3   GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA--ARYVHL 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT+     +AVD  V  FG L ++VNNAGI       I +  L+E++++ D+N+ GVF 
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTGVFL 118

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G++   + M    +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRV
Sbjct: 119 GIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 178

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N + P  V T +    +PE+                     G      +V+N V++LASD
Sbjct: 179 NSIHPGLVKTPM-TDWVPEDIF---------------QTALGRAAEPVEVSNLVVYLASD 222

Query: 254 EARYISGTNLMVDGGFTS 271
           E+ Y +G   +VDGG  +
Sbjct: 223 ESSYSTGAEFVVDGGTVA 240

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  299 bits (768), Expect = e-103
 Identities = 86/261 (32%), Positives = 125/261 (47%), Gaps = 17/261 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VAL+TGGA+G+G   V+L    GAKV  +D+ +  GQQ+   LG    + F   
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER--SMFVRH 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+ E D    +     + GTL+++VNNAGI      D+    L +F ++  IN + VF 
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFI 117

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGI 191
           G +     M     G+II++ SV+  +       Y+ SK AV  L +  A    K  Y I
Sbjct: 118 GCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLF 249
           RVN + P  + T +  A LP+    E         V  +  +   G       +A  VLF
Sbjct: 177 RVNSIHPDGIYTPMMQASLPKGVSKE--------MVLHDPKLNRAGRAYMPERIAQLVLF 228

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASDE+  +SG+ L  D    
Sbjct: 229 LASDESSVMSGSELHADNSIL 249

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  291 bits (748), Expect = e-100
 Identities = 92/257 (35%), Positives = 123/257 (47%), Gaps = 14/257 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L G+  +ITGGA G+G    R     GA+V +ADV D  G    + LG      + H D
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA--ARYQHLD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT EED    V    E+FG++D +VNNAGIS      +    +  F KV +IN+ GVF G
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM--FLETESVERFRKVVEINLTGVFIG 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           MK     M     G+I++I S AG +G     +Y  SK  V GL+K  A ELG   IRVN
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVN 177

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V P    T +       +                     G E    ++A AV+ L SD 
Sbjct: 178 SVHPGMTYTPMTAETGIRQGEGNYPNTPMGRV--------GNE--PGEIAGAVVKLLSDT 227

Query: 255 ARYISGTNLMVDGGFTS 271
           + Y++G  L VDGG+T+
Sbjct: 228 SSYVTGAELAVDGGWTT 244

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  287 bits (738), Expect = 4e-98
 Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 12/258 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L  +VA+ITG   GIG  T R+  + GA+V +AD+ +        S+G          
Sbjct: 7   AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRG--AVHHVV 64

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+T E  V + +D T++ FG LDI+ NNA  S      + +  +  ++  F +N +G   
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K+A   +I    G I++I S           AY  +K A+  L + VA + G++G+R 
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P  V T      LP+             F   +    G     +++A  V FLASD
Sbjct: 185 NAIAPGLVRTPRLEVGLPQPIV--------DIFATHHL--AGRIGEPHEIAELVCFLASD 234

Query: 254 EARYISGTNLMVDGGFTS 271
            A +I+G  +  D G  +
Sbjct: 235 RAAFITGQVIAADSGLLA 252

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  287 bits (738), Expect = 5e-98
 Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 8/270 (2%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           +        S     L G+VA++TG   GIG +  R     G  V  AD+  +       
Sbjct: 12  LEAQTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT 71

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
            +G       C  DV+ E+ + + VD  V  FG +D +V NAG+       + +  + +F
Sbjct: 72  KIGCG--AAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLA--SLIDTTVEDF 127

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           ++V  IN++G +   KHAA  MI +  G I+++ S+AG +   G  AY  SK  ++ L++
Sbjct: 128 DRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSR 187

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
             AAEL   GIR N + P  V T +    +   +    A           A +QG     
Sbjct: 188 ITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARS----MIARLQGRMAAP 243

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFT 270
            ++A  V+FL SD+A  I+GT  + DGG  
Sbjct: 244 EEMAGIVVFLLSDDASMITGTTQIADGGTI 273

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  286 bits (735), Expect = 1e-97
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 7/267 (2%)

Query: 7   TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---G 63
           T +S    R   RV LITGG +G+G +T       GAK+ + DV     +    ++    
Sbjct: 2   TATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA 61

Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
            + +      DV+ E  V + V  T E+FG +D   NNAGI G   P       +EF+KV
Sbjct: 62  PDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP-TESFTAAEFDKV 120

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             IN++GVF G++   +IM  Q  G +++  SV G  G      Y  +KH V+GL +N A
Sbjct: 121 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSA 180

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E G+YGIR+N ++P A+ T + + +  ++   E+       F+  N         A ++
Sbjct: 181 VEYGRYGIRINAIAPGAIWTPM-VENSMKQLDPENPRKAAEEFIQVNP--SKRYGEAPEI 237

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
           A  V FL SD+A Y++ T + +DGG +
Sbjct: 238 AAVVAFLLSDDASYVNATVVPIDGGQS 264

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  284 bits (730), Expect = 9e-97
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 13/277 (4%)

Query: 3   NSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL 62
           +  + +       L  RV ++TGG +GIG +T  LF K+GA V +ADV ++   +V   +
Sbjct: 12  DLGTENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI 71

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
           G +   F    DV+  +D  S V+ T  K+G +D++VNNAG       ++       +++
Sbjct: 72  GSK--AFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTG--NVVTIPEETWDR 127

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           +  +NVKG+F   K+   +M     G+II+  S           AY  SK A+  L + +
Sbjct: 128 IMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAM 187

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTA 240
           A +  K GIRVN V+P  + +        E +        F       R         TA
Sbjct: 188 AMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMG-------TA 240

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR 277
            ++A A+LFLASD +R+ +G+ L VDGG +  NH ++
Sbjct: 241 EEIAEAMLFLASDRSRFATGSILTVDGGSSIGNHLVK 277

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  283 bits (726), Expect = 2e-96
 Identities = 84/258 (32%), Positives = 126/258 (48%), Gaps = 15/258 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           R  G+V ++TGG  GIG   VR F   GA+V I D  ++ G+ + Q L G     F  CD
Sbjct: 6   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG---AVFILCD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+E+DV + V  T+ +FG LD +VNNAG    P     E     F ++ ++N+ G +  
Sbjct: 63  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLGTYTL 121

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A   +  +++G +I+I S+ GAIG      Y  +K AV  + K +A +   YG+RVN
Sbjct: 122 TKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFV--ARNANMQGTELTANDVANAVLFLAS 252
           C+SP  + T L             ++          R            +V  A +FLAS
Sbjct: 181 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMG-------QPAEVGAAAVFLAS 233

Query: 253 DEARYISGTNLMVDGGFT 270
           + A + +G  L+V GG  
Sbjct: 234 E-ANFCTGIELLVTGGAE 250

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  277 bits (712), Expect = 4e-94
 Identities = 80/271 (29%), Positives = 122/271 (45%), Gaps = 14/271 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFF 70
            RL G++A++TG ++GIG +   LF + GAKV +     N   ++   +   GGE     
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE--AAA 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV  E    + V+L V +FG LD   NNAG  GA    I    +  + +  D N+  
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGE-ISSLSVEGWRETLDTNLTS 120

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKY 189
            F   K+    +     G++    S  G   G  G   Y  SK  ++GL + +A ELG  
Sbjct: 121 AFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGAR 180

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN + P    T    A+LP         V   + + R A          ++A A L+
Sbjct: 181 GIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIA-------RPEEIAEAALY 233

Query: 250 LASDEARYISGTNLMVDGGFTSVNHSLRVFR 280
           LASD A +++G  L+ DGG +    +  ++ 
Sbjct: 234 LASDGASFVTGAALLADGGASVTKAAENLYF 264

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  276 bits (709), Expect = 6e-94
 Identities = 80/261 (30%), Positives = 131/261 (50%), Gaps = 15/261 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
            RL G+VA+ITGG  GIG +    F + GAKV I     ++G++  +S+G      F   
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQH 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D + E+      D T + FG +  +VNNAGI+      + E   +E+ K+  +N+ GVF 
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFF 119

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYG 190
           G +   + M  +    +II++ S+ G +G     AY  SK AV  ++K+ A +     Y 
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +RVN V P  + T L +  LP  E         +  +             ND+A   ++L
Sbjct: 180 VRVNTVHPGYIKTPL-VDDLPGAEEAMSQRT--KTPMGHIG-------EPNDIAYICVYL 229

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           AS+E+++ +G+  +VDGG+T+
Sbjct: 230 ASNESKFATGSEFVVDGGYTA 250

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  276 bits (709), Expect = 7e-94
 Identities = 82/266 (30%), Positives = 122/266 (45%), Gaps = 18/266 (6%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
           P    L G+VALITG  +G GE   + F K GAKV I D      ++V   +G       
Sbjct: 2   PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA--ALA 59

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D++KE DV +AV+  + KFG +DI+VNNAGI   P       +  EF+++  +NV+G
Sbjct: 60  VAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQN-AELVEPEEFDRIVGVNVRG 118

Query: 131 VFHGMKHAARIMIPQTKG----TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           V+                     I+++ S            Y  +K  V+ + K +A EL
Sbjct: 119 VYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIEL 178

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV--ARNANMQGTELTANDVA 244
               IRV  ++P A  T L    + E+  +E+    FR+ +   R           +D+A
Sbjct: 179 APAKIRVVALNPVAGETPLLTTFMGED--SEEIRKKFRDSIPMGRLL-------KPDDLA 229

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
            A  FL S +A  I+G  L VDGG +
Sbjct: 230 EAAAFLCSPQASMITGVALDVDGGRS 255

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  274 bits (704), Expect = 3e-93
 Identities = 80/262 (30%), Positives = 132/262 (50%), Gaps = 13/262 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           Q L  +V ++TG  +GIG +  + F  + + V   ++ ++   Q+    + +G E     
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE--VLG 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV+K++DV   V  T E +  +D++ NNAGI     P + E     +E+V  +N+  
Sbjct: 61  VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTP-VAEVSDELWERVLAVNLYS 119

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F+  +    IM+ Q KG I++  S+AG  GG     YT +KH ++GL +++AA  G  G
Sbjct: 120 AFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQG 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IR   V P  V T + L      E     +    +  +R A          D+AN ++FL
Sbjct: 180 IRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLA-------EPEDIANVIVFL 232

Query: 251 ASDEARYISGTNLMVDGGFTSV 272
           ASDEA +++G  ++VDGG T +
Sbjct: 233 ASDEASFVNGDAVVVDGGLTVL 254

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  272 bits (699), Expect = 2e-92
 Identities = 83/259 (32%), Positives = 135/259 (52%), Gaps = 12/259 (4%)

Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHCD 74
           + RVA++TG ++G G +    F   G +V   D+     ++  ++              D
Sbjct: 1   MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           V  E DV +A+  T+E+FG +D++VNNAGI+G +    +    + +F+KV  +NV+G+F 
Sbjct: 61  VADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G +     M+ Q  G I++I SVA  +   G  AYT SK AVL L K+VA +    GIR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V P  + T +      ++    D ++  R              TA  VA+AV+FLA +
Sbjct: 181 NAVCPGMIETPM-TQWRLDQPELRDQVLA-RIPQKEIG-------TAAQVADAVMFLAGE 231

Query: 254 EARYISGTNLMVDGGFTSV 272
           +A Y++G  L++DG +T++
Sbjct: 232 DATYVNGAALVMDGAYTAI 250

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  269 bits (689), Expect = 7e-91
 Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 11/263 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
           ++  G+V L+TG    IG +T     + G  + + D+     ++     +  G E     
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE--ARS 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
             CDVT EE V   VD  V  FG +D + NNAG  GA  P +++    +F +V  INV G
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDDFARVLTINVTG 119

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            FH +K  +R MI Q  G I++  S+AG  G     AY  SK A++ L +  A +L  Y 
Sbjct: 120 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE-----LTANDVAN 245
           IRVN +SP  +  G       E +    +     +       M G+         N++  
Sbjct: 180 IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPG 239

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
            V FL  D++ +++G NL + GG
Sbjct: 240 VVAFLLGDDSSFMTGVNLPIAGG 262

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  268 bits (688), Expect = 1e-90
 Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 12/258 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +    +VA++TGG++GIG + V    ++GAKV    + +     V               
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF---------KI 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT EE+V  AV+ T +K+G +DI+VNNAGI       +       + ++ D+NV G + 
Sbjct: 61  DVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS--PLHLTPTEIWRRIIDVNVNGSYL 118

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K+   +M+    G+II+I SV          AY  SKHA+LGL ++VA +     IR 
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRC 177

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V P  + T + +     E   ++  V  +       +  G      +VA  V FLASD
Sbjct: 178 NAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASD 237

Query: 254 EARYISGTNLMVDGGFTS 271
            + +I+G  L VDGG  S
Sbjct: 238 RSSFITGACLTVDGGLLS 255

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  264 bits (677), Expect = 4e-89
 Identities = 81/258 (31%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G+  L+TGGA GIG +  + F + GA V + D++   G++V +++GG     F   D
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA----FFQVD 57

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +  E +    V+      G +D++VNNA I+           L E+ +V ++N+    H 
Sbjct: 58  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTAPMHL 115

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              AAR M     G I+++ SV G        AY  SK  ++ L +++A +L    IRVN
Sbjct: 116 SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVN 175

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTANDVANAVLFLAS 252
            V+P A+AT   L  +      E     + +  A  R            +VA AVLFLAS
Sbjct: 176 AVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLG-------KPEEVAEAVLFLAS 228

Query: 253 DEARYISGTNLMVDGGFT 270
           ++A +I+G  L VDGG T
Sbjct: 229 EKASFITGAILPVDGGMT 246

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  262 bits (671), Expect = 9e-88
 Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 12/262 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
                VALITG  +GIG +T       G  V          ++V       GG+      
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ--AIAL 82

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV+ E  + +AV   V KFG LDI+V NAGI+G   P I +    E+++   +N++G 
Sbjct: 83  EADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAP-IDDLKPFEWDETIAVNLRGT 141

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           F  +      +  +  G I+ + S+ G       G  AYT +K A + + + +A ELGK+
Sbjct: 142 FLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKH 201

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVL 248
            IRVN V P A+ T ++        R E+       +      +   +   + DVA  + 
Sbjct: 202 HIRVNAVCPGAIETNISDNTK---LRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIR 258

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FL S+ AR+++G+ + +DGG  
Sbjct: 259 FLVSERARHVTGSPVWIDGGQG 280

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  260 bits (667), Expect = 3e-87
 Identities = 77/260 (29%), Positives = 110/260 (42%), Gaps = 14/260 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDT-FF 70
               R  L+TGG +GIG+         GA V I     +      Q L   G       +
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+T E++   AVD      G L  +V+ AG S    P I + D   + +  D+NV G
Sbjct: 68  EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP-ITQVDSEAWRRTVDLNVNG 126

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
             + +KHAAR M+    G+ + I S+A +       AY  +K AV  L +  A ELG   
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +RVN + P  + T L  A + E              + R            DVAN  +FL
Sbjct: 187 VRVNSIRPGLIRTDLV-AAITESAELSSDYAM-CTPLPRQG-------EVEDVANMAMFL 237

Query: 251 ASDEARYISGTNLMVDGGFT 270
            SD A +++G  + VDGG  
Sbjct: 238 LSDAASFVTGQVINVDGGQM 257

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  259 bits (663), Expect = 6e-87
 Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 21/261 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             L  +V ++TG + GIG +    F   G+KV    + D    +               C
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY----------DHIEC 53

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT  + V +++D   +++G++ ++VNNAGI       I    + E+ ++ D+N+ G ++
Sbjct: 54  DVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYG--KIESMSMGEWRRIIDVNLFGYYY 111

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             K A   MI     +I++I SV  +I      AY  SKHAV+GL K++A +     +R 
Sbjct: 112 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRC 170

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLF 249
           N V P  + T L +    E E   D M   +     +       +       +VA+AV F
Sbjct: 171 NAVCPATIDTPL-VRKAAELEVGSDPMRIEK---KISEWGHEHPMQRIGKPQEVASAVAF 226

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS EA +I+GT L VDGG +
Sbjct: 227 LASREASFITGTCLYVDGGLS 247

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  257 bits (660), Expect = 2e-86
 Identities = 87/261 (33%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ ALITG A GIG +    + + GA V IAD+     +Q    +G     +    
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPA--AYAVQM 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DVT+++ + +A+  TVE  G LDI+VNNA +   AP  +I       +EK+F INV G  
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES---YEKLFAINVAGTL 118

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             ++ AAR MI Q   G II++ S AG  G      Y  +K AV+ L ++   +L K+ I
Sbjct: 119 FTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRI 178

Query: 192 RVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            VN ++P  V       +  L             R          G   TA D+    +F
Sbjct: 179 NVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVP--FGRMGTAEDLTGMAIF 236

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS E+ YI      VDGG  
Sbjct: 237 LASAESDYIVSQTYNVDGGNW 257

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  257 bits (658), Expect = 9e-86
 Identities = 83/280 (29%), Positives = 121/280 (43%), Gaps = 27/280 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---------------- 58
           R+ G+VA +TG A G G S      + GA +   D+   +   V                
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 59  ---CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA 115
               +             DV   + + +AVD  VE+ G LDI+V NAGI       + + 
Sbjct: 68  ADLVKGHNRR--IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDT-LDKT 124

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHA 174
              ++ ++ DIN+ GV+  +K     MI   + G+II   SV G         Y  +KH 
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHG 184

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           V+GL +    ELG++ IRVN V P  V T +       +    D      + +A    M 
Sbjct: 185 VVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF 244

Query: 235 GTE----LTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
            T     +   D++NAVLF ASDEARYI+G  L +D G  
Sbjct: 245 HTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC 284

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  255 bits (655), Expect = 1e-85
 Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 26/263 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
           RL G+ A+ITG   GIG+     F   GA V ++D+  +    V    Q LGG+   F C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AFAC 65

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            CD+T E+++ +  D  + K G +DI+VNNAG  G    D+  AD   F + +++NV   
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMAD---FRRAYELNVFSF 122

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FH  +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  I
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
           RVN ++P A+ T    + +  E                   +Q T +       D+ANA 
Sbjct: 183 RVNGIAPGAILTDALKSVITPE--------------IEQKMLQHTPIRRLGQPQDIANAA 228

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
           LFL S  A ++SG  L V GG  
Sbjct: 229 LFLCSPAASWVSGQILTVSGGGV 251

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  256 bits (656), Expect = 1e-85
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 9/260 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L G VALITGGA+G+G + V  F   GA+V + D      +++  + GG         D
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGN--AVGVVGD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREADLSEFEKVFDINVKGV 131
           V   +D   A +  +  FG +D ++ NAGI            +   + F+ +F +NVKG 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            H +K     ++   +G+++   S AG     G   YT +KHAV+GL + +A EL    +
Sbjct: 120 IHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HV 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V+P  + T L             + V   + +     + G      +   A +F A
Sbjct: 178 RVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI-GRMPALEEYTGAYVFFA 236

Query: 252 SDEA-RYISGTNLMVDGGFT 270
           +       +G  L  DGG  
Sbjct: 237 TRGDSLPATGALLNYDGGMG 256

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  254 bits (651), Expect = 3e-85
 Identities = 76/257 (29%), Positives = 135/257 (52%), Gaps = 16/257 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+V ++T  A GIG++    F + GAKV   D+ ++  Q++ +  G +        D
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ----TRVLD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VTK++ +    D    +   LD++ N AG        + + +  +++   ++NV+ ++  
Sbjct: 59  VTKKKQI----DQFANEVERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +K     M+ Q  G II++ SVA ++ G+     Y+ +K AV+GL K+VAA+  + GIR 
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NCV P  V T      +      E+A     +F+ R     G   TA ++A   ++LASD
Sbjct: 173 NCVCPGTVDTPSLQERIQARGNPEEAR---NDFLKRQK--TGRFATAEEIAMLCVYLASD 227

Query: 254 EARYISGTNLMVDGGFT 270
           E+ Y++G  +++DGG++
Sbjct: 228 ESAYVTGNPVIIDGGWS 244

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  252 bits (647), Expect = 3e-84
 Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           QRL  ++A+ITG  +GIG +  + F   GA+V I   + ++       +GG         
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG--AVGIQA 82

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           D     ++    +    + G +D++  NAG     P  ++ E     ++  FD NVKGV 
Sbjct: 83  DSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQ---YDDTFDRNVKGVL 139

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++ A  ++      +++   S AG+ G      Y  SK A+    +N   +L   GIR
Sbjct: 140 FTVQKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIR 197

Query: 193 VNCVSPYAVAT-GLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTANDVANAVLF 249
           +N +SP    T GL      +  + +  +      V   R          A +VA A LF
Sbjct: 198 INTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVG-------RAEEVAAAALF 250

Query: 250 LASDEARYISGTNLMVDGGFTSV 272
           LASD++ +++G  L VDGG   V
Sbjct: 251 LASDDSSFVTGAELFVDGGSAQV 273

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  252 bits (645), Expect = 6e-84
 Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD-TF 69
            R   +VA+ITG + GIG +T  LF + GAKV I        ++      + G       
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD--IREADLSEFEKVFDIN 127
               DVT +      +  T+ KFG LDI+VNNAG +             +  ++   ++N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAEL 186
           ++ V    K A   +   TKG I++I S+A  +        Y+ +K A+    +N A +L
Sbjct: 122 LRSVIALTKKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDL 180

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            ++GIRVN +SP  VATG   A    EE ++                 G      D+A  
Sbjct: 181 IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP--AGVMGQPQDIAEV 238

Query: 247 VLFLASDE-ARYISGTNLMVDGGFTSVN 273
           + FLA  + + YI G  L+VDGG + + 
Sbjct: 239 IAFLADRKTSSYIIGHQLVVDGGSSLIM 266

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  250 bits (641), Expect = 2e-83
 Identities = 85/272 (31%), Positives = 113/272 (41%), Gaps = 20/272 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT------ 68
           +L GRVA ITG A G G +        GA +   D+   L   V        D       
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67

Query: 69  --------FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSE 119
                        D    + +   VD  V   G LDI+V NAG++      DI   D   
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPED--- 124

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           F  V DINV G ++ +   A  +I   + G+II I S AG         YT SKHAV GL
Sbjct: 125 FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGL 184

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +  AAELGK+ IRVN V P  V T +    +              + V     +     
Sbjct: 185 ARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF-LPDWVA 243

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
              D+A+ V +LASDE+R ++   + VD G T
Sbjct: 244 EPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  248 bits (635), Expect = 2e-82
 Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 23/265 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFF 70
             + G+VAL+TG A GIG +        GAKV + D     G Q   +L  +     T F
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 62

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
             CDV  ++ +       V+ FG LDI+VNNAG++        E +   +EK   IN+  
Sbjct: 63  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN-------NEKN---WEKTLQINLVS 112

Query: 131 VFHGMKHAARIMIPQTKG---TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA--AE 185
           V  G       M  Q  G    II++ S+AG +       Y  SKH ++G  ++ A  A 
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 172

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
           L   G+R+N + P  V T + L  + +EE     +    +            L    +AN
Sbjct: 173 LMNSGVRLNAICPGFVNTAI-LESIEKEENMGQYIEYKDHIKDMIK--YYGILDPPLIAN 229

Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
            ++ L  D+A  ++G  + +     
Sbjct: 230 GLITLIEDDA--LNGAIMKITTSKG 252

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  247 bits (633), Expect = 2e-82
 Identities = 87/259 (33%), Positives = 128/259 (49%), Gaps = 13/259 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           RL  RVA++TGGA  IG + V    + GA+V IAD+ + +  +  + L  E  D      
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT  E V +AV    E+ G +DI+V  AGI  +      +    ++ K  DIN+ G+F 
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVK-AEDMTDGQWLKQVDINLNGMFR 128

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYGI 191
             +   RIM+ Q +G I++I S++G I        AY  SK  V    +++AAE   +GI
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           R N V+P  + T L      E+    DA +             G     ++VA+ V FLA
Sbjct: 189 RANAVAPTYIETTL-TRFGMEKPELYDAWI--------AGTPMGRVGQPDEVASVVQFLA 239

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD A  ++G  + VD GFT
Sbjct: 240 SDAASLMTGAIVNVDAGFT 258

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  245 bits (629), Expect = 1e-81
 Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 23/276 (8%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+++         + L  +VAL+T    GIG +  R   + GA V ++  +     +   
Sbjct: 1   MASTGVERR----KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVA 56

Query: 61  SLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           +L GE        C V K ED    V + V   G +DI+V+NA ++      I +A    
Sbjct: 57  TLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGN-IIDATEEV 115

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           ++K+  +NVK      K     M  +  G+++ + SV           Y  SK A+LGL 
Sbjct: 116 WDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLT 175

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL- 238
           KN+A EL    IRVNC++P  + T  +   L  ++  ++ M             +   + 
Sbjct: 176 KNLAVELAPRNIRVNCLAPGLIKTNFSQV-LWMDKARKEYM------------KESLRIR 222

Query: 239 ---TANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
                 D A  V FL S++A YI+G  ++V GG  S
Sbjct: 223 RLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTAS 258

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  244 bits (625), Expect = 5e-81
 Identities = 72/262 (27%), Positives = 108/262 (41%), Gaps = 26/262 (9%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           Q   G+VAL+TG A GIG + V      GA+V +AD           ++ G         
Sbjct: 24  QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADR----------AVAGIAADLHLPG 73

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           D+ +               G LDI+VNNAG+       +  +AD   +     +NV+  F
Sbjct: 74  DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDAD---WSLSLGVNVEAPF 130

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              + A  +M     G I+++ S  G   G G   Y  +K A+  L + +  +    GIR
Sbjct: 131 RICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIR 190

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           +N V P  V T +      +     D         A     +   L       D+A+ VL
Sbjct: 191 INAVCPNEVNTPMLRTGFAKRGFDPDR--------AVAELGRTVPLGRIAEPEDIADVVL 242

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FLASD ARY+ G+ + V+GG  
Sbjct: 243 FLASDAARYLCGSLVEVNGGKA 264

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  242 bits (620), Expect = 2e-80
 Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 15/262 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
             L  +V +I+G    +G +  R   + GA + +A       + V       G       
Sbjct: 7   GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR--ALS 64

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+T +  V   VD T++ +G +D+++NNA    +  P              ++ V G
Sbjct: 65  VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKP-FANTTFEHMRDAIELTVFG 123

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
               ++     +  ++KG ++++ S+          AY  +K A+L +++ +A ELG+ G
Sbjct: 124 ALRLIQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKG 182

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           IRVN V P  +  G     L      +    G       NA   G++L    T ++VA+A
Sbjct: 183 IRVNSVLPGYIWGGT----LKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA 238

Query: 247 VLFLASDEARYISGTNLMVDGG 268
           +LF+ASD A  I+G  L V+ G
Sbjct: 239 ILFMASDLASGITGQALDVNCG 260

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  242 bits (619), Expect = 2e-80
 Identities = 86/269 (31%), Positives = 129/269 (47%), Gaps = 26/269 (9%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGE 65
           S  +   L   VA++TG A GIG +    F K GA V + D++    + V  ++   GG+
Sbjct: 3   SYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK 62

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                  C+VT E+   + +   +++FG + ++VNNAG  G    D+  +D   FE  F 
Sbjct: 63  --AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSD---FEWAFK 117

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           +N+  +F   + AA  M     G I++I S+AG    +   +Y  SK AV  L +N+A +
Sbjct: 118 LNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFD 177

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAN 241
           +G  GIRVN ++P A+ T      L  E                 A ++ T L     A 
Sbjct: 178 VGPMGIRVNAIAPGAIKTDALATVLTPE--------------IERAMLKHTPLGRLGEAQ 223

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFT 270
           D+ANA LFL S  A +ISG  L V GG  
Sbjct: 224 DIANAALFLCSPAAAWISGQVLTVSGGGV 252

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  241 bits (618), Expect = 4e-80
 Identities = 80/271 (29%), Positives = 125/271 (46%), Gaps = 16/271 (5%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           + + D    V RL G+ ALITG   GIG    R F   GA++ ++    +      ++LG
Sbjct: 6   TTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALG 65

Query: 64  GEP--DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEF 120
            +   D      D+ + +          E FG LD++VNNAGIS   P  D        F
Sbjct: 66  EQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQL---F 122

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           +    +N++          + M+   + G II++ S A        +AY  SK  ++   
Sbjct: 123 DATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMAT 182

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           K +A ELG +GIR N V P  V T +    +  +E     M+  R  + R A        
Sbjct: 183 KVLARELGPHGIRANSVCPTVVLTEM-GQRVWGDEAKSAPMIA-RIPLGRFA-------V 233

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFT 270
            ++V++AV++LASD A  I+G ++ VDGG+T
Sbjct: 234 PHEVSDAVVWLASDAASMINGVDIPVDGGYT 264

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  242 bits (620), Expect = 7e-80
 Identities = 80/292 (27%), Positives = 122/292 (41%), Gaps = 25/292 (8%)

Query: 1   MSNSNSTDSSPAV--QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV 58
           M    +    P     ++ G+VA ITG A G G S      + GA +   DV   L    
Sbjct: 9   MGTLEAQTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVK 68

Query: 59  ---------------CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG 103
                           ++LG          DV   + + +AVD  V + G LDI++ NA 
Sbjct: 69  LPMSTPDDLAETVRQVEALGRR--IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAA 126

Query: 104 ISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGG 162
           ++      +   D   +  + D+N+ G +   + A   ++  +  G+I+   S+ G  G 
Sbjct: 127 LASEGTR-LNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185

Query: 163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG 222
                Y  SKH + GL + +A ELG   IRVN V P +VAT + L          D    
Sbjct: 186 ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENP 245

Query: 223 FRNFVARNANMQGTE----LTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                   +          +   D++NA+LFL SD+ARYI+G +L VDGG  
Sbjct: 246 TVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL 297

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  241 bits (618), Expect = 9e-80
 Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 21/272 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT------ 68
            L GRVA ITG A G G S        GA +   D+   +   V  +     D       
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 69  --------FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSE 119
                        DV  +  +   V   +E+FG LD++V NAG+       ++ +     
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ--- 128

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           ++ V  +N+ G +  ++     MI     G+I+ + S AG     G   Y+ SKH +  L
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTAL 188

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
              +A ELG+YGIRVN + PY+V T + +      E          +F           +
Sbjct: 189 TNTLAIELGEYGIRVNSIHPYSVETPM-IEPEAMMEIFARHPSFVHSFPPMPV-QPNGFM 246

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           TA++VA+ V +LA D +  ++GT + VD G  
Sbjct: 247 TADEVADVVAWLAGDGSGTLTGTQIPVDKGAL 278

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  239 bits (613), Expect = 1e-79
 Identities = 69/258 (26%), Positives = 119/258 (46%), Gaps = 24/258 (9%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGGEPDTFFCHCDVT 76
               L+TGG+ GIG++ V L  ++     I  D+Q +   +  +         F   D+T
Sbjct: 4   MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK---------FIKADLT 54

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
           K++D+ + +D  + K  + D +  NAGI       I + D+   +KV D+NV    + +K
Sbjct: 55  KQQDITNVLD--IIKNVSFDGIFLNAGILIKG--SIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
                +  +   +I+   S    I      AYT SK A+  + K++A +L KY IRVN V
Sbjct: 111 GLENNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTV 168

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLAS 252
            P  V T L    + +         G     A+    +   L       ++A  V+FL S
Sbjct: 169 CPGTVDTDLYRNLIQKYANNV----GISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLS 224

Query: 253 DEARYISGTNLMVDGGFT 270
           D++++++G  + +DGG+T
Sbjct: 225 DKSKFMTGGLIPIDGGYT 242

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  239 bits (612), Expect = 4e-79
 Identities = 77/273 (28%), Positives = 116/273 (42%), Gaps = 18/273 (6%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDNLGQQVC 59
           M+ S +         L G+V L+T  A TGIG +T R     GA V I+D  +    +  
Sbjct: 5   MNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETR 64

Query: 60  QSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREAD 116
             L   G        CDVT  E V + +  TVEK G LD++VNNAG+ G  P  D+ + +
Sbjct: 65  DQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEE 124

Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
              +++V ++ +  V    + A R        G I++  SV G         Y  +K  V
Sbjct: 125 ---WDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGV 181

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           + L +  A E  ++G+R+N VSP              E    D +        R A    
Sbjct: 182 MALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELL--DRLAS-DEAFGRAA---- 234

Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                 +VA  + FLASD + Y++G  + V   
Sbjct: 235 ---EPWEVAATIAFLASDYSSYMTGEVVSVSSQ 264

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  239 bits (613), Expect = 8e-79
 Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 9/265 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
           R  G+  +ITG + GIG S   +F K GA+V I    ++  ++        G   +    
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82

Query: 72  H-CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT+       ++ T+ KFG +DI+VNNAG + A      +  +  ++K F +N + 
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142

Query: 131 VFHGMKHAARIMIPQTKGTIISICS-VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           V    +     +I +TKG I+++ S VAG     G   Y  +K A+    +  A +L ++
Sbjct: 143 VIEMTQKTKEHLI-KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+RVN VSP AVATG   A    E  ++       +         G      ++AN ++F
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP--VGHCGKPEEIANIIVF 259

Query: 250 LAS-DEARYISGTNLMVDGGFTSVN 273
           LA  + + YI G +++ DGG T V 
Sbjct: 260 LADRNLSSYIIGQSIVADGGSTLVM 284

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  238 bits (610), Expect = 1e-78
 Identities = 79/290 (27%), Positives = 118/290 (40%), Gaps = 46/290 (15%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---------------QVC 59
           R+  +V L+TGGA G G S      + GA + + D+  ++                    
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           +  G +   +    DV     V   +   V +FG LD++V NAGI    CP      +  
Sbjct: 67  EKTGRK--AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI----CPLGAHLPVQA 120

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHAY 168
           F   FD++  GV + +  A   +      +II+  SVAG I            G G   Y
Sbjct: 121 FADAFDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGY 178

Query: 169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL--------ALAHLPEEERTEDAM 220
           + +K  V      +AA+L    IR N + P  V T +              E     DA+
Sbjct: 179 SYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADAL 238

Query: 221 VGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           + F    A    M    + A+D++NAV FLASDE+RY++G    VD G  
Sbjct: 239 LAFPAMQA----MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM 284

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  236 bits (605), Expect = 4e-78
 Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 28/267 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQV---CQSLGGEPDTF 69
           + L G+V +ITG +TG+G+S    F    AKV +      +    V    + +GGE    
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE--AI 60

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINV 128
               DVT E DV + V   +++FG LD+M+NNAG+       ++  +D   + KV D N+
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD---WNKVIDTNL 117

Query: 129 KGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
            G F G + A +  +    KGT+I++ SV   I       Y  SK  +  + + +A E  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDV 243
             GIRVN + P A+ T +  A    +      +                 +       ++
Sbjct: 178 PKGIRVNNIGPGAINTPI-NAEKFADPEQRADV------------ESMIPMGYIGEPEEI 224

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
           A    +LAS EA Y++G  L  DGG T
Sbjct: 225 AAVAAWLASSEASYVTGITLFADGGMT 251

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  236 bits (604), Expect = 7e-78
 Identities = 91/262 (34%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L GR A++TGG+ GIG +  R   K GA V IAD+     Q V   L      F    D
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENG--GFAVEVD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           VTK   V +A+   ++  G  D++  NAG+S   P  DI + +   ++  FD+N +GVF 
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEE---WDFNFDVNARGVFL 123

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             + A R  +   TKG I++  S+A  +G      Y+ SK AV G  + +A E+    IR
Sbjct: 124 ANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIR 183

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VNCV P  V T    A    E   E  + G      R   +  T L       DVA+ V+
Sbjct: 184 VNCVCPGFVKT----AMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVV 239

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FLASD AR+++G  + V GG  
Sbjct: 240 FLASDAARFMTGQGINVTGGVR 261

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  236 bits (604), Expect = 9e-78
 Identities = 84/276 (30%), Positives = 118/276 (42%), Gaps = 29/276 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---------------C 59
            L G+VA ITG A G G +        GA +   D+ D +                    
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           + +G          DV   E + +A+   +++ G LDI+V NAGI+         A    
Sbjct: 70  EDIGSR--IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPM------SAGDDG 121

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPH----AYTGSKHA 174
           +  V D+N+ GV+H +K A   ++ Q T G+I+ I S AG  G          Y  +KH 
Sbjct: 122 WHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHG 181

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           V+GL +  A  L    IRVN + P  V T + + +    E             A    M 
Sbjct: 182 VVGLMRVYANLLAGQMIRVNSIHPSGVETPM-INNEFTREWLAKMAAATDTPGAMGNAMP 240

Query: 235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
              L   DVANAV +L SD+ARYI+G  L VD GF 
Sbjct: 241 VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL 276

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  235 bits (603), Expect = 1e-77
 Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 11/268 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD-TF 69
            R   +  +ITG + GIG +T  LF + GA V I        ++        G       
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDIN 127
               DVT E+     ++ T+++FG +D++VNNAG +   A      +  +  + K   +N
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICS-VAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           ++ V    K     ++  +KG I+++ S VAG         Y  +K A+    ++ A +L
Sbjct: 122 LQAVIEMTKKVKPHLV-ASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
            K+GIRVN VSP  V TG     +   ++       F         + G       +AN 
Sbjct: 181 AKFGIRVNSVSPGMVETGF-TNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIANI 238

Query: 247 VLFLASDEA-RYISGTNLMVDGGFTSVN 273
           +LFLA      YI G +++ DGG + V 
Sbjct: 239 ILFLADRNLSFYILGQSIVADGGTSLVM 266

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  235 bits (601), Expect = 1e-77
 Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 25/267 (9%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPD 67
           P   R   +V ++TG   GIG++      + GA V +AD+     + V     + GG   
Sbjct: 2   PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT-- 59

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG----APCPDIREADLSEFEKV 123
                 DV+  E   +  D T+ +FG +D +VNNA I G         I       ++K 
Sbjct: 60  AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEY---YKKF 116

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             +N+ G     +   + M  +  G I++  S A  +       Y  +K  + GL + ++
Sbjct: 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLS 173

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            ELG   IR+N ++P  + T       P+E    D +V     ++R         T +D+
Sbjct: 174 RELGGRNIRINAIAPGPIDTEANRTTTPKEMV--DDIVK-GLPLSRMG-------TPDDL 223

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
               LFL SDEA +I+G    VDGG  
Sbjct: 224 VGMCLFLLSDEASWITGQIFNVDGGQI 250

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  235 bits (601), Expect = 2e-77
 Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 14/264 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFFC 71
            L   VA++TGG++GIG +TV L  + GA V          +    +L         F  
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKG 130
            CDV     V +  +      G   I+VNNAG    +   +  +     + +   +    
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEA---WSEELQLKFFS 121

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V H ++     +  +    I+ + S+  +       A + ++  V  L +++A E    G
Sbjct: 122 VIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKG 181

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           +RVN +    V +G       E     +  + +  + A+ A  +   L       + A A
Sbjct: 182 VRVNGILIGLVESGQ-WRRRFEARE--ERELDWAQWTAQLARNKQIPLGRLGKPIEAARA 238

Query: 247 VLFLASDEARYISGTNLMVDGGFT 270
           +LFLAS  + Y +G+++ V GG +
Sbjct: 239 ILFLASPLSAYTTGSHIDVSGGLS 262

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  234 bits (600), Expect = 3e-77
 Identities = 69/283 (24%), Positives = 115/283 (40%), Gaps = 26/283 (9%)

Query: 1   MSNSNSTDSSPAVQ---RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ 57
           M  S  +  +   +    L G  AL+TGG+ GIG + V      GA+V      +    +
Sbjct: 1   MEESKVSMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE 60

Query: 58  V---CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGIS-GAPCPDI 112
                +  G         CD+    +    +      F G L+I+VNNAG+       D 
Sbjct: 61  CLEIWREKGLN--VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDF 118

Query: 113 READLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK 172
            E D   +  +   N +  +H  + A  ++     G +I + S+AG         Y+ SK
Sbjct: 119 TEKD---YNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK 175

Query: 173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
            A+  + K++A E  K  IRVN V+P  + T L    + +    ++ +  F         
Sbjct: 176 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNF--------- 226

Query: 233 MQGTEL----TANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
           +  T +       +V+  + FL    A YI+G  +  DGGFT+
Sbjct: 227 IVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA 269

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  233 bits (597), Expect = 4e-77
 Identities = 80/259 (30%), Positives = 116/259 (44%), Gaps = 16/259 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCH 72
           QRL  ++A+ITGGA GIG +    F   GA + IAD+      +   ++LG         
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR--VLTVK 60

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
           CDV++  DV +     +  FG  DI+VNNAGI    P  ++       ++K F+INV   
Sbjct: 61  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQ---WKKTFEINVDSG 117

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   K     M     G II++ S    +       Y  +K A +G  + +A++LGK GI
Sbjct: 118 FLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN ++P  V T              D +      + R            D+  A  FLA
Sbjct: 178 TVNAIAPSLVRTAT-TEASALSAM-FDVLPNMLQAIPRLQ-------VPLDLTGAAAFLA 228

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD+A +I+G  L VDGG  
Sbjct: 229 SDDASFITGQTLAVDGGMV 247

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  233 bits (598), Expect = 4e-77
 Identities = 84/261 (32%), Positives = 121/261 (46%), Gaps = 14/261 (5%)

Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFCHC 73
           + +VAL+TG   GIG++      K G  V IAD  D   + V       GG         
Sbjct: 1   MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH--AVAVKV 58

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DV+  + V +AV+   +  G  D++VNNAG++   P   I        +KV++INVKGV 
Sbjct: 59  DVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEI---VDKVYNINVKGVI 115

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            G++ A      +   G II+ CS AG +G      Y+ SK AV GL +  A +L   GI
Sbjct: 116 WGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGI 175

Query: 192 RVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
            VN   P  V T +   +     E   +    G   F  R     G      DVA  V +
Sbjct: 176 TVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT--LGRLSEPEDVAACVSY 233

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LAS ++ Y++G +L++DGG  
Sbjct: 234 LASPDSDYMTGQSLLIDGGMV 254

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  233 bits (597), Expect = 6e-77
 Identities = 81/262 (30%), Positives = 128/262 (48%), Gaps = 16/262 (6%)

Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-----QVCQSLGGEPDTFFC 71
           + +VA++TGGA GIG          G  + +AD+     Q     ++ ++   +    F 
Sbjct: 1   MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK--AVFV 58

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKG 130
             DVT + +  SA+D   EK G  D++VNNAGI+   P  ++ E D    ++++ +NV  
Sbjct: 59  GLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEED---LKQIYSVNVFS 115

Query: 131 VFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           VF G++ A+R       KG II+  S+A   G     AY+ +K AV GL +  A EL   
Sbjct: 116 VFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPK 175

Query: 190 GIRVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           G  VN  +P  V TG+   +     +   +     F+ + +  A   G      DVA  V
Sbjct: 176 GHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIA--LGRPSVPEDVAGLV 233

Query: 248 LFLASDEARYISGTNLMVDGGF 269
            FLAS+ + Y++G  ++VDGG 
Sbjct: 234 SFLASENSNYVTGQVMLVDGGM 255

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  233 bits (596), Expect = 7e-77
 Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 18/260 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
               G+ A++ GG  G+G +TVR   + GA+V +    ++   ++ +  G          
Sbjct: 4   GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR--VHALRS 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           D+    ++        +  G +D++  NAG+S   P   + EA    +++ F +N KG F
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS---YDRQFAVNTKGAF 118

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             ++    ++  +  G+I+   SVA   G  G   Y+ SK A++     +AAEL   GIR
Sbjct: 119 FTVQRLTPLI--REGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIR 176

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTANDVANAVLFL 250
           VN VSP  + T         E    +      N     RN        TA++VA AVLFL
Sbjct: 177 VNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNG-------TADEVARAVLFL 229

Query: 251 ASDEARYISGTNLMVDGGFT 270
           A + A + +G  L VDGG  
Sbjct: 230 AFE-ATFTTGAKLAVDGGLG 248

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  232 bits (595), Expect = 1e-76
 Identities = 59/267 (22%), Positives = 104/267 (38%), Gaps = 25/267 (9%)

Query: 8   DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----G 63
              P    L  R+ L+TG + GIG      + ++GA V +    +   +QV   +    G
Sbjct: 2   HYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG 61

Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
            +P  F         E+           +  LD +++NAG+ G  CP + E +   ++ V
Sbjct: 62  RQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQNPQVWQDV 120

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVA 183
             +NV   F   +    +++    G+++   S  G  G     AY  SK A  G+ + +A
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA 180

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            E  +  +RVNC++P    T +  +  P E+              +         T  D+
Sbjct: 181 DEYQQ-RLRVNCINPGGTRTAMRASAFPTED------------PQKLK-------TPADI 220

Query: 244 ANAVLFLASDEARYISGTNLMVDGGFT 270
               L+L  D++R  +G       G  
Sbjct: 221 MPLYLWLMGDDSRRKTGMTFDAQPGRK 247

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  229 bits (586), Expect = 4e-75
 Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 18/253 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +   ++A++TG  +G+G +        G  V +A  + +  Q+    +G +        D
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD--ALCVPTD 82

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT  + V +    TVEKFG +D++ NNAG      P + +   +++++V D N+ G F  
Sbjct: 83  VTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIP-MEDLTFAQWKQVVDTNLTGPFLC 141

Query: 135 MKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            + A R+M  Q    G II+  S++          YT +KHA+ GL K+ + +   + I 
Sbjct: 142 TQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIA 201

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
              +      T +A   +       D  +                +    VA+AV+++AS
Sbjct: 202 CGQIDIGNADTPMA-QKMKAGVPQADLSI-----------KVEPVMDVAHVASAVVYMAS 249

Query: 253 D-EARYISGTNLM 264
                 +    +M
Sbjct: 250 LPLDANVQFMTIM 262

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  225 bits (577), Expect = 4e-74
 Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 21/258 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L GR  L+TG   GIG  TV+  H  GA+V            + +   G         D
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG---IEPVCVD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           +   E    A +  +   G +D++VNNA ++   P  ++ +     F++ F++N++ V  
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEA---FDRSFEVNLRAVIQ 113

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +  AR +I +   G I+++ S            Y  +K A+  L K +A ELG + IR
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 173

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+P  V T +  A   +  + +  M+  R  + + A           V NA+LFL S
Sbjct: 174 VNAVNPTVVMTSMGQATWSDPHKAK-TMLN-RIPLGKFA-------EVEHVVNAILFLLS 224

Query: 253 DEARYISGTNLMVDGGFT 270
           D +   +G+ L V+GGF 
Sbjct: 225 DRSGMTTGSTLPVEGGFW 242

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  225 bits (577), Expect = 7e-74
 Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 17/259 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G  A +TG  +GIG    R F   GA++ + D +     +  Q LG          D
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA-VAARIVAD 66

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           VT  E + +A     E    + I+VN+AGI+      +  +A    + +V  +NV G+F 
Sbjct: 67  VTDAEAMTAAAA-EAEAVAPVSILVNSAGIARLHDALETDDAT---WRQVMAVNVDGMFW 122

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYGI 191
             +   R M+ +  G I+++ S++G I        +Y  SK AV  L + +AAE    G+
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN ++P  VAT +    + E     +  +     + R           +++A A LFLA
Sbjct: 183 RVNALAPGYVATEMT-LKMRERPELFETWLD-MTPMGRCG-------EPSEIAAAALFLA 233

Query: 252 SDEARYISGTNLMVDGGFT 270
           S  A Y++G  L VDGG+T
Sbjct: 234 SPAASYVTGAILAVDGGYT 252

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  225 bits (575), Expect = 8e-74
 Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 21/259 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G  AL+TG   GIG  TV+  H  GAKV      ++    + +   G         D
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG---IEPVCVD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           +   +    A +  +   G +D++VNNA +    P  ++ +     F++ F +N++ VF 
Sbjct: 61  LGDWD----ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEA---FDRSFSVNLRSVFQ 113

Query: 134 GMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +  AR MI +   G+I+++ S+   +       Y+ +K A+  L K +A ELG + IR
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIR 173

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN V+P  V T +      + E     +   R+ + + A ++       DV N++LFL S
Sbjct: 174 VNSVNPTVVLTDMGKKVSADPEFAR-KLKE-RHPLRKFAEVE-------DVVNSILFLLS 224

Query: 253 DEARYISGTNLMVDGGFTS 271
           D +   SG  ++VD G+ +
Sbjct: 225 DRSASTSGGGILVDAGYLA 243

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  225 bits (576), Expect = 1e-73
 Identities = 71/266 (26%), Positives = 107/266 (40%), Gaps = 24/266 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
            L G  AL+TGG+ GIG   V      GA V                 +S G +      
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK--VEAS 63

Query: 72  HCDVTKEEDVCSAVDLTVEKF-GTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
            CD++   +    ++     F G L+I+VNNAGI       D    D   +  +  IN +
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED---YSLIMSINFE 120

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +H    A   +    +G ++ I SV+GA+       Y  +K A+  L + +A E  K 
Sbjct: 121 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 180

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
            IRVN V P  +AT L    + + E+ E            N  +    L       ++A 
Sbjct: 181 NIRVNGVGPGVIATSLVEMTIQDPEQKE----------NLNKLIDRCALRRMGEPKELAA 230

Query: 246 AVLFLASDEARYISGTNLMVDGGFTS 271
            V FL    A Y++G  + VDGG  +
Sbjct: 231 MVAFLCFPAASYVTGQIIYVDGGLMA 256

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  225 bits (576), Expect = 1e-73
 Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 28/261 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+  L+TG A+GIG + + LF + GA +   D ++ L  +   +L  E        D
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE--AIAVVAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           V+  + V +     +E+FG L  + + AG++  A   ++       +EKV  +N+ G F 
Sbjct: 61  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEA---WEKVLRVNLTGSFL 117

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A  ++  +  G+++   SVAG +G  G   Y   K  V+GL + +A EL + G+RV
Sbjct: 118 VARKAGEVL--EEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRV 174

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLF 249
           N + P  + T +  A LP                A    +  + L       +VA A LF
Sbjct: 175 NVLLPGLIQTPM-TAGLPPW--------------AWEQEVGASPLGRAGRPEEVAQAALF 219

Query: 250 LASDEARYISGTNLMVDGGFT 270
           L S+E+ YI+G  L VDGG +
Sbjct: 220 LLSEESAYITGQALYVDGGRS 240

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  225 bits (576), Expect = 2e-73
 Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 27/265 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFC 71
            L G+VA +TG + GIG +    + + GA V I        ++        G    +   
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH--SKAY 88

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            C+++  + V   +    + FGT+D+ V NAG++    P+I   +   + K+  +++ GV
Sbjct: 89  KCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGV 148

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKY 189
           ++   +  +I     KG++I   S++G I  +      Y  +K A   L K++A E   +
Sbjct: 149 YYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF 208

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
             RVN +SP  + T +      ++               +    Q T L       ++  
Sbjct: 209 A-RVNTISPGYIDTDIT-DFASKD--------------MKAKWWQLTPLGREGLTQELVG 252

Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
             L+LAS+ + + +G+++++DGG+T
Sbjct: 253 GYLYLASNASTFTTGSDVVIDGGYT 277

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  225 bits (575), Expect = 2e-73
 Identities = 84/263 (31%), Positives = 129/263 (49%), Gaps = 24/263 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFC 71
            L G+ ALITG +TGIG+     + + GA+V +A    +  Q V   +   GG+      
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK--ALPI 86

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKG 130
            CDVT+ + V   +D    + G +DI V NAGI       D+   +   F+++ D NV G
Sbjct: 87  RCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEE---FQRIQDTNVTG 143

Query: 131 VFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELG 187
           VF   + AAR M+ Q   GTII+  S++G I  +      Y  SK AV+ L K +A EL 
Sbjct: 144 VFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELA 203

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
            + IRVN VSP  + T L    L +           +  + R            ++    
Sbjct: 204 PHQIRVNSVSPGYIRTELV-EPLAD---YHALWEP-KIPLGRMG-------RPEELTGLY 251

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
           L+LAS  + Y++G+++++DGG+T
Sbjct: 252 LYLASAASSYMTGSDIVIDGGYT 274

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  225 bits (575), Expect = 2e-73
 Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 18/265 (6%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-- 66
            +       GR+AL+TGG TG+G    +     G  V I   + ++       +GG    
Sbjct: 24  MAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN 83

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDI 126
                 CDV   + V +       +F  LD++VNNAG +  P P + E    ++  +   
Sbjct: 84  IVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVP-LEEVTFEQWNGIVAA 142

Query: 127 NVKGVFHGMKHAARIMIPQTK--GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           N+ G F   +HA R+M  QT   G II+  S++          YT +KHA+ GL K+ A 
Sbjct: 143 NLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTAL 202

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           +   + I    +     AT +  A +       +  V                +    +A
Sbjct: 203 DGRMHDIACGQIDIGNAATDMT-ARMSTGVLQANGEV-----------AAEPTIPIEHIA 250

Query: 245 NAVLFLASDEAR-YISGTNLMVDGG 268
            AV+++AS      +    +M    
Sbjct: 251 EAVVYMASLPLSANVLTMTVMATRM 275

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  222 bits (569), Expect = 7e-73
 Identities = 43/256 (16%), Positives = 80/256 (31%), Gaps = 20/256 (7%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
            +AL+T      G + V    + G  V   D       +  +     P           E
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENP-----GTIALAE 56

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAP-CPDIREADLSEFEKVFDINVKGVFHGMKH 137
           +     VD T++    +D +V+N  I        +     ++  ++F+         ++ 
Sbjct: 57  QKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQS 116

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           A   +      ++I I S  G         Y  ++ A + L ++ A  L + GI +  + 
Sbjct: 117 AIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIG 176

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLASD 253
           P                          N   R    +   L      +++   + FLAS 
Sbjct: 177 PNFFNN----------PTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASR 226

Query: 254 EARYISGTNLMVDGGF 269
            A  I G      GG+
Sbjct: 227 RAAPIVGQFFAFTGGY 242

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  222 bits (568), Expect = 1e-72
 Identities = 71/261 (27%), Positives = 106/261 (40%), Gaps = 22/261 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G+   +TG   GIG +T   F + GAKV   D                  T     D
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAF-------TQEQYPFATE--VMD 54

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFH 133
           V     V       + +   LD +VN AGI        + + D   +++ F +NV G F+
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKED---WQQTFAVNVGGAFN 111

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +        Q  G I+++ S A     +G  AY  SK A+  L  +V  EL   G+R 
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLF 249
           N VSP +  T +    L   +  E+  +             G  L       ++AN +LF
Sbjct: 172 NVVSPGSTDTDM-QRTLWVSDDAEEQRIR----GFGEQFKLGIPLGKIARPQEIANTILF 226

Query: 250 LASDEARYISGTNLMVDGGFT 270
           LASD A +I+  +++VDGG T
Sbjct: 227 LASDLASHITLQDIVVDGGST 247

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  223 bits (571), Expect = 1e-72
 Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 24/270 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEP--DTFF 70
           Q ++ + A+ITG  +GIG +  R   K GA + +      +  + V   + G        
Sbjct: 21  QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVK 129
              D+TK  ++   + +  ++FG  DI+VNNAG+       D        ++++  +N+ 
Sbjct: 81  HPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQ---WDRIIAVNLS 137

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             FH ++ A   M  +  G II+I S  G +      AY  +KH ++GL K VA E+ + 
Sbjct: 138 SSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAES 197

Query: 190 GIRVNCVSPYAVATGL---------ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
           G+ VN + P  V T L             + EE+   + M      +          +T 
Sbjct: 198 GVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVM------LKGQP--TKKFITV 249

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFT 270
             VA+  L+LA D+A  I+GT++ +DGG+T
Sbjct: 250 EQVASLALYLAGDDAAQITGTHVSMDGGWT 279

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  224 bits (572), Expect = 2e-72
 Identities = 81/278 (29%), Positives = 121/278 (43%), Gaps = 28/278 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---------------QVC 59
           RL G+VA ITG A G G +      + GA +   D+                     ++ 
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           +  G          DV     + + VD  + +FG +DI+V+N GI            L++
Sbjct: 103 EEQGRR--IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGI----SNQGEVVSLTD 156

Query: 120 --FEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVL 176
             +  +   N+ G +H  +     MI + + G++I + S  G  G  G   Y  SKH V 
Sbjct: 157 QQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216

Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT 236
           GL  ++A E+G++ IRVN V+P AV T +AL     +          R   A   +    
Sbjct: 217 GLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTL 276

Query: 237 E----LTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                +   DV+NAV +LASDEARYI G  + VDGG  
Sbjct: 277 LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  222 bits (567), Expect = 2e-72
 Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 25/266 (9%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV--- 58
           S+ +  D    +  L G+VA++TG + GIG +  R     GA+V +        + V   
Sbjct: 13  SSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVERE 72

Query: 59  CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
             + GGE       CD++  + + +     +   G  D++VNNAG+     P       +
Sbjct: 73  IVAAGGE--AESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHT-MKPA 129

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           E++ +  +N+K  +  ++  A  MI   +G II+I S+AG        AYT SK  + GL
Sbjct: 130 EWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGL 189

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
             + A EL ++ +RV+ V+P +V T      L  ++    A                  +
Sbjct: 190 MTSAAEELRQHQVRVSLVAPGSVRTEFG-VGLSAKKSALGA------------------I 230

Query: 239 TANDVANAVLFLASDEARYISGTNLM 264
             +D+A+ V  LA+   +      L+
Sbjct: 231 EPDDIADVVALLATQADQSFISEVLV 256

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  220 bits (564), Expect = 4e-72
 Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 7/257 (2%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCD 74
           L G+ AL+TG  +GIG    ++  + GA + +    D           G +        D
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVK--AVHHPAD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           ++    + +   L   +FG +DI+VNNAGI   AP           ++K+  +N+  VFH
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLES---WDKIIALNLSAVFH 116

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G + A   M  +  G II+I SV G +G  G  AY  +KH V+GL K V  E     +  
Sbjct: 117 GTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTC 176

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N + P  V T L    + +        +  ++ +          +T   +   VLFL S+
Sbjct: 177 NAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSE 236

Query: 254 EARYISGTNLMVDGGFT 270
               + G    VDGG+ 
Sbjct: 237 AGSQVRGAAWNVDGGWL 253

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  220 bits (564), Expect = 1e-71
 Identities = 72/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---------------QVC 59
              G+ ALITGGA G+G S      + GA + I D  +N                   + 
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 60  QSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE 119
           +  G    +     DV     + S V    +  G +DI + NAGI           ++  
Sbjct: 67  EKTGRRCISA--KVDVKDRAALESFVAEAEDTLGGIDIAITNAGI----STIALLPEVES 120

Query: 120 --FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
             +++V   N+ G F+ +   A  MI +  G I+++ S+ G        +Y  SK  V+G
Sbjct: 121 AQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIG 180

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--- 234
           L K  A +L  YGI VN V+P  + T +            D        V          
Sbjct: 181 LTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQ 240

Query: 235 -GTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
               L   +V  AVLFL  + + +I+GT L +D G T
Sbjct: 241 YAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  220 bits (563), Expect = 1e-71
 Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT 68
           S   +++  G  A+++GGA G+GE+TVR  H  G  V IAD+    G+ +   LG     
Sbjct: 21  SMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNR--A 78

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREADLSEFEKVFD 125
            F   +VT E+ V +A++   +       +V + G   A      D   AD+  F K  D
Sbjct: 79  EFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138

Query: 126 INVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           + + G ++  +  A  +          +G ++   S+AG  G +G  AY  +K  V+GL 
Sbjct: 139 LYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLT 198

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
              A +L   GIRVN ++P  + T + +  + EE            F  R         T
Sbjct: 199 IAAARDLSSAGIRVNTIAPGTMKTPI-MESVGEEAL--AKFAANIPFPKRLG-------T 248

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
            ++ A+A  FL ++   YI+G  + +DG 
Sbjct: 249 PDEFADAAAFLLTN--GYINGEVMRLDGA 275

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  219 bits (561), Expect = 2e-71
 Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 19/263 (7%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFF 70
             +  +V +ITGG++G+G+     F K GA+V I        ++     +   G+     
Sbjct: 2   NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ--ILT 59

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
              DV   +D+   ++   EKFG +DI++NNA  +   P  D+       +  V +I + 
Sbjct: 60  VQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNG---WNSVINIVLN 116

Query: 130 GVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG- 187
           G F+  +   +  I +  KG II++ +      G G      +K  VL + K +A E G 
Sbjct: 117 GTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGR 176

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           KYGIRVN ++P  +        L   E      +     + R    +       ++A   
Sbjct: 177 KYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQ-SVPLGRLGTPE-------EIAGLA 228

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
            +L SDEA YI+GT + +DGG  
Sbjct: 229 YYLCSDEAAYINGTCMTMDGGQH 251

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  218 bits (558), Expect = 4e-71
 Identities = 63/262 (24%), Positives = 102/262 (38%), Gaps = 25/262 (9%)

Query: 7   TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---- 62
            D S   + L GRV L+TG A GIG +  R +  HGA V +    +    +V   +    
Sbjct: 3   FDYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG 62

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
             +P     + +    +           +FG LD +++NA I G   P + +    +F +
Sbjct: 63  QPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTP-LEQLPDEDFMQ 121

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           V  +NV   F   +    ++      +I    S  G  G     AY  SK A  GL + +
Sbjct: 122 VMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTL 181

Query: 183 AAEL-GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           A EL G   +R N ++P A  TG+     P+    E+ +                     
Sbjct: 182 ADELEGVTAVRANSINPGATRTGMRAQAYPD----ENPL---------------NNPAPE 222

Query: 242 DVANAVLFLASDEARYISGTNL 263
           D+    L+L   ++  I+G  L
Sbjct: 223 DIMPVYLYLMGPDSTGINGQAL 244

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  218 bits (559), Expect = 4e-71
 Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 28/265 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEPDTFFC 71
            L  +  L+TGG  GIG + V  F   GA +      +    +     Q  G +      
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ--VTGS 68

Query: 72  HCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
            CD +   +    +      FG  LDI++NN G     P  D    D   F      N++
Sbjct: 69  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAED---FSFHISTNLE 125

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +H  + A  ++     G II + S+AG +       Y+ +K A+  L +N+A E    
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 185

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
           GIR N V+P  +AT LA   + ++E              +   +    L       +V++
Sbjct: 186 GIRANAVAPAVIATPLA-EAVYDDE-------------FKKVVISRKPLGRFGEPEEVSS 231

Query: 246 AVLFLASDEARYISGTNLMVDGGFT 270
            V FL    A YI+G  + VDGG T
Sbjct: 232 LVAFLCMPAASYITGQTICVDGGLT 256

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  217 bits (556), Expect = 7e-71
 Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 11/255 (4%)

Query: 17  VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--QQVCQSLGGEPDTFFCHCD 74
           +G+V L+TG + GIG+S V +         +  V  +    +++ +  G     F+   D
Sbjct: 1   MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRF--FYVVGD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +T++  +   V+  V+  G +D +V NAG+   P  ++ E D++ ++K++DIN   +   
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLE-PVQNVNEIDVNAWKKLYDINFFSIVSL 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +  A   +  +T G ++ + S A  +      AY  SK A+      +A E  +  ++  
Sbjct: 118 VGIALPELK-KTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAI 174

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V+P  V T +   ++ E      +M   +  + R        L ++  A     LA   
Sbjct: 175 AVAPGIVDTDMQ-VNIRENVG-PSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHG 232

Query: 255 -ARYISGTNLMVDGG 268
               ++G  L  +  
Sbjct: 233 IPDGVNGQYLSYNDP 247

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  216 bits (554), Expect = 2e-70
 Identities = 65/262 (24%), Positives = 103/262 (39%), Gaps = 27/262 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQ---SLGGEPDTFFC 71
              + AL+TG + G+G++      ++G  + I   +      +  +    LG +      
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK--VLVV 59

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKG 130
             +V +   +        E FG LD+ VNNA      P  ++ E     ++   +IN K 
Sbjct: 60  KANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETH---WDWTMNINAKA 116

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           +    + AA++M     G I+SI S+              SK A+  L + +A EL    
Sbjct: 117 LLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQ 176

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANA 246
           I VN VS  A+ T   L H P  E   +               Q T         D+ + 
Sbjct: 177 IIVNAVSGGAIDTDA-LKHFPNREDLLEDA------------RQNTPAGRMVEIKDMVDT 223

Query: 247 VLFLASDEARYISGTNLMVDGG 268
           V FL S +A  I G  ++VDGG
Sbjct: 224 VEFLVSSKADMIRGQTIIVDGG 245

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  218 bits (557), Expect = 2e-70
 Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 15/259 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHC 73
             G+VA ITGG TG+G+    L    GA+  IA  + ++ +   + +  +         C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVF 132
           DV   + V + V   ++  G  +I++NNA  +  +P   +       ++ + DI + G  
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNA---WKTITDIVLNGTA 140

Query: 133 HGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
                  + +I  Q     +SI ++    G         +K  V  ++K++AAE GKYG+
Sbjct: 141 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 200

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           R N + P  + T  A + L      E  M+G R    R   ++       ++AN   FL 
Sbjct: 201 RFNVIQPGPIKTKGAFSRLDPTGTFEKEMIG-RIPCGRLGTVE-------ELANLAAFLC 252

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD A +I+G  +  DGG  
Sbjct: 253 SDYASWINGAVIKFDGGEE 271

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  216 bits (552), Expect = 4e-70
 Identities = 78/268 (29%), Positives = 114/268 (42%), Gaps = 24/268 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGV 131
            D++K E V   VD  V + G +DI+VNNAGI   A   D        ++ +  +N+  V
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEK---WDAILALNLSAV 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           FHG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178

Query: 192 RVNCVSPYAVATGL---------ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
             N + P  V T L             + +E    + +        +        +T   
Sbjct: 179 TANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL------SEKQP--SLQFVTPEQ 230

Query: 243 VANAVLFLASDEARYISGTNLMVDGGFT 270
           +    +FLASD A  I+GT + VDGG+T
Sbjct: 231 LGGTAVFLASDAAAQITGTTVSVDGGWT 258

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  216 bits (552), Expect = 6e-70
 Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 14/256 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCHC 73
           L  +VA ITGG +GIG     +F +HG    IA           + L G           
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVF 132
           DV     V +AVD  +++FG +DI++N A  +   P   +       F+ V DI+  G F
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNA---FKTVMDIDTSGTF 141

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           +  +           G I++I +  G  G         +K AV  + +++A E G   IR
Sbjct: 142 NVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIR 201

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P  ++    L  L   + +    V   + + R  N         ++A++VL+LAS
Sbjct: 202 VNSLAPGPISGTEGLRRLGGPQASLSTKVT-ASPLQRLGNKT-------EIAHSVLYLAS 253

Query: 253 DEARYISGTNLMVDGG 268
             A Y++G  L+ DGG
Sbjct: 254 PLASYVTGAVLVADGG 269

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  215 bits (551), Expect = 7e-70
 Identities = 72/269 (26%), Positives = 112/269 (41%), Gaps = 29/269 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----CQSLGGEPDTFF 70
             V +  ++TGG  GIG +  R     GA V +         +V     +  G +  T  
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK--TKA 68

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVK 129
             CDV+  + V   +       G +  ++ NAG+S   P  ++   D   F  V+D+NV 
Sbjct: 69  YQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHED---FAFVYDVNVF 125

Query: 130 GVFHGMKHAARIMIP-QTKGTIISICSVAGAI-------GGLGPHAYTGSKHAVLGLNKN 181
           GVF+  +  A++ +  Q KG+I+   S++  I       G L    Y  SK A   L K 
Sbjct: 126 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKG 185

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +AAE    GIRVN +SP  V T    AH+ ++ R              +           
Sbjct: 186 LAAEWASAGIRVNALSPGYVNTDQT-AHMDKKIRDH----------QASNIPLNRFAQPE 234

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFT 270
           ++    + L SD A Y++G    +DGG  
Sbjct: 235 EMTGQAILLLSDHATYMTGGEYFIDGGQL 263

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  214 bits (548), Expect = 1e-69
 Identities = 44/258 (17%), Positives = 85/258 (32%), Gaps = 21/258 (8%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
             A++T      G  +     + G  V   D       ++ ++        +       E
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-EAFAET----YPQLKPMSE 56

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           ++    ++     +G +D++V+N   +    P  + A   ++    +      F  +   
Sbjct: 57  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAV-EDYRGAVEALQIRPFALVNAV 115

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
           A  M  +  G II I S            YT ++     L   ++ ELG+Y I V  + P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175

Query: 199 YAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFLAS 252
             + +            +   +               + T L    T  ++   V FLAS
Sbjct: 176 NYLHSEDSPYFYPTEPWKTNPE---------HVAHVKKVTALQRLGTQKELGELVAFLAS 226

Query: 253 DEARYISGTNLMVDGGFT 270
               Y++G    + GGF 
Sbjct: 227 GSCDYLTGQVFWLAGGFP 244

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  214 bits (548), Expect = 1e-69
 Identities = 83/272 (30%), Positives = 120/272 (44%), Gaps = 37/272 (13%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLGGEPDTF 69
             L G+  LITG + GIG +T RLF + GAKV +   +            ++ GG+    
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGD--AA 60

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG--APCPDIREADLSEFEKVFDIN 127
           F   D+   E     VD  V KFG +D+++NNAG      P P+I +     ++ V D N
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTF---YDAVMDAN 117

Query: 128 VKGVFHGMKHAARIMIPQTK-----GTIISICSVAGAIGG-LGPHAYTGSKHAVLGLNKN 181
           ++ V    K A   +    K       +IS  S+AG  GG  G   Y  +K  +  ++KN
Sbjct: 118 IRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKN 177

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL--- 238
                 K G+R N VSP  V T    A   ++ R  D +              G  +   
Sbjct: 178 WVDFHTKDGVRFNIVSPGTVDTAF-HADKTQDVR--DRI------------SNGIPMGRF 222

Query: 239 -TANDVANAVLFLASDEA-RYISGTNLMVDGG 268
            TA ++A A LF AS  A  YI+G  L ++GG
Sbjct: 223 GTAEEMAPAFLFFASHLASGYITGQVLDINGG 254

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  214 bits (547), Expect = 2e-69
 Identities = 48/260 (18%), Positives = 84/260 (32%), Gaps = 28/260 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVC-QSLGGEPDTFFCH 72
            L  +  +      GIG  T R   K   K   I D  +N       +++  + +  F  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 73  CDVT-KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            DVT    +    +    ++  T+DI++N AGI       + +      E+   IN  G+
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI-------LDDHQ---IERTIAINFTGL 111

Query: 132 FHGMKHAARIMIPQTKG---TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +           +  G    I +ICSV G         Y+ SK AV+    ++A     
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            G+    ++P    T L +         E  +            +     T+       +
Sbjct: 172 TGVTAYSINPGITRTPL-VHTFNSWLDVEPRV--------AELLLSHPTQTSEQCGQNFV 222

Query: 249 FLASDEARYISGTNLMVDGG 268
                     +G    +D G
Sbjct: 223 KAIEANK---NGAIWKLDLG 239

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  213 bits (545), Expect = 4e-69
 Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 15/261 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
            L G+ AL+TG A G+G +        GA+V + D++  L  +   +L  +  D      
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVF 132
           DVT E  + +A      +   +DI++NNAGI    P  ++   +   ++KV D N+   F
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELEN---WQKVIDTNLTSAF 122

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              + AA+ MI + + G II+I S+           YT +K  +  L  ++AAE  ++ I
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           + N + P  + T +  A + +++              R    +       ++    +FL+
Sbjct: 183 QTNAIGPGYILTDMNTALIEDKQFDSWVKS--STPSQRWGRPE-------ELIGTAIFLS 233

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           S  + YI+G  + VDGG+ +V
Sbjct: 234 SKASDYINGQIIYVDGGWLAV 254

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  214 bits (548), Expect = 6e-69
 Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 24/274 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD--------VQDNLGQQVCQSLGGEP 66
            L G+VA++TGGATGIG++ V+   + G+ V IA           D L   +  +     
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQAR- 73

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFD 125
                 C++  EE+V + V  T++ FG ++ +VNN G    +P   I       +  V +
Sbjct: 74  -VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKG---WHAVLE 129

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
            N+ G F+  K      + +  G+I++I  V    G         ++  V  L K++A E
Sbjct: 130 TNLTGTFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALE 188

Query: 186 LGKYGIRVNCVSPYAVATGLALAHL-PEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
               GIR+NCV+P  + +  A+ +     +   +     +    R    +       +V+
Sbjct: 189 WACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ-KIPAKRIGVPE-------EVS 240

Query: 245 NAVLFLASDEARYISGTNLMVDGGFTSVNHSLRV 278
           + V FL S  A +I+G ++ VDGG +   HS  V
Sbjct: 241 SVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEV 274

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  212 bits (543), Expect = 8e-69
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 30/259 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           R   +V +ITG + GIG   VR +     +V               S   +        D
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK------PSADPD--IHTVAGD 76

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFH 133
           ++K E     V   +E+FG +D +VNNAG+    P  ++ + D   ++    +NV G FH
Sbjct: 77  ISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQED---YDHNLGVNVAGFFH 133

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
             + AA  M+ Q  G I+SI +        G+     + +K  +  + +++A E  + G+
Sbjct: 134 ITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGV 193

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN VSP  + T +     P E      + G  + V R            DV +AVL+L 
Sbjct: 194 RVNAVSPGVIKTPM----HPAETH--STLAG-LHPVGRMG-------EIRDVVDAVLYL- 238

Query: 252 SDEARYISGTNLMVDGGFT 270
            + A +I+G  L VDGG  
Sbjct: 239 -EHAGFITGEILHVDGGQN 256

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  212 bits (542), Expect = 1e-68
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 11/262 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCH 72
            + G+VA+ITG ++GIG +    F K GA + +   Q +   +  +SL  +         
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV   E V + V+     FG  DI+VNNAG        I EA   +++  +++ V    
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE--TIMEAADEKWQFYWELLVMAAV 121

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +     M  +  G II   S+           Y  +K A++  +K +A E+ K  IR
Sbjct: 122 RLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181

Query: 193 VNCVSPYAVATGLALAHLPE--EERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVL 248
           VNC++P  + T   +    E  ++   D     ++    +A ++      +  ++AN  +
Sbjct: 182 VNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFA---SPEELANFFV 238

Query: 249 FLASDEARYISGTNLMVDGGFT 270
           FL S+ A Y  G+   VDGG  
Sbjct: 239 FLCSERATYSVGSAYFVDGGML 260

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  211 bits (540), Expect = 2e-68
 Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 17/259 (6%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           +RL G+ AL+TG A GIG++        GA V ++D+     +    S+G +        
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK--ARAIAA 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           D++    V +         G +DI+VNNA I       D+       + K+ D+N+ G F
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH---WRKIIDVNLTGTF 116

Query: 133 HGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              +     M    K G +ISI S     G     AY  +K  V+G  + +A ELGKY I
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNI 176

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
             N V+P  + +   +   P  E      V     +               +A+ V FLA
Sbjct: 177 TANAVTPGLIESDG-VKASPHNEA--FGFVEMLQAMKGKG-------QPEHIADVVSFLA 226

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD+AR+I+G  L VD G  
Sbjct: 227 SDDARWITGQTLNVDAGMV 245

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  211 bits (540), Expect = 3e-68
 Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 16/261 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCH 72
            L GRVAL+TGG+ G+G    +   + G  V +A        +  Q L  +   +T    
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGV 131
           CDV+  E+V   ++   EKFG LD +VN AGI+   P  +    +   F +V ++N+ G 
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDE---FRQVIEVNLFGT 134

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYG 190
           ++  + A  ++      +II+I S+      +    AY  SK  V  L K +A E G+YG
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRVN ++P    T +    +  +    D M+  R  + R    +       D+    +FL
Sbjct: 195 IRVNVIAPGWYRTKMT-EAVFSDPEKLDYMLK-RIPLGRTGVPE-------DLKGVAVFL 245

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           AS+EA+Y++G  + VDGG+T+
Sbjct: 246 ASEEAKYVTGQIIFVDGGWTA 266

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  207 bits (529), Expect = 8e-67
 Identities = 55/266 (20%), Positives = 97/266 (36%), Gaps = 27/266 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTF 69
                 +A+ITG + GIG          G +V +        + +  ++ +S     +  
Sbjct: 3   LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPI 62

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D+T      + +    +K+G +DI+VN A +            +  F K+ +INV 
Sbjct: 63  VLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDG---SLSEPVDNFRKIMEINVI 119

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
             +  +K    IM  Q  G I ++ S A   G      Y  +K A+LGL +++  EL   
Sbjct: 120 AQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPL 179

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRV  + P  V T +A        + E+                   +  +D+ N +  
Sbjct: 180 GIRVTTLCPGWVNTDMA-KKAGTPFKDEEM------------------IQPDDLLNTIRC 220

Query: 250 LASDEAR-YISGTNLMVDGGFTSVNH 274
           L +      I      +       +H
Sbjct: 221 LLNLSENVCIKDIVFEMKKSIIEGHH 246

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  207 bits (529), Expect = 2e-66
 Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 18/259 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ--QVCQSLGGEPDTFFCH 72
            L GR A++TG  +GIG +    + + GA V      D + +        GG        
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGS--AEAVV 85

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGV 131
            D+   E   +  +  +     +D++VNNAGI   AP  ++       + +V  +N+   
Sbjct: 86  ADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAPAEEVSLGR---WREVLTVNLDAA 141

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           +   +     M+    G I++I S+    GG    AY  SKHAV+GL + +A+E    G+
Sbjct: 142 WVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGV 201

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            VN ++P  V T    A   ++ER  +     R    R A       T  D+    +FLA
Sbjct: 202 GVNALAPGYVVTANTAALRADDERAAEITA--RIPAGRWA-------TPEDMVGPAVFLA 252

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD A Y+ G  L VDGG+ 
Sbjct: 253 SDAASYVHGQVLAVDGGWL 271

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  205 bits (525), Expect = 3e-66
 Identities = 40/262 (15%), Positives = 88/262 (33%), Gaps = 38/262 (14%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             + +  L+ GG+  +G   V+ F          D ++N                     
Sbjct: 19  SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----------HSFTIK 67

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            + EE++ S ++    K   +D  V  AG   +      +  L   + + D+N+   F  
Sbjct: 68  DSGEEEIKSVIEKINSKSIKVDTFVCAAGG-WSGGNASSDEFLKSVKGMIDMNLYSAFAS 126

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYGIR 192
               A+++     G  +   + A      G  AY  +K A   + K++A+E G    G  
Sbjct: 127 AHIGAKLL--NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGST 184

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-FLA 251
              + P  + T     ++ +    +                       ++VA  +  +  
Sbjct: 185 SLGILPVTLDTPTNRKYMSDANFDDWT-------------------PLSEVAEKLFEWST 225

Query: 252 SDEARYISGTNLMVD--GGFTS 271
           + ++R  +G+ +  +     T+
Sbjct: 226 NSDSRPTNGSLVKFETKSKVTT 247

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  207 bits (528), Expect = 3e-66
 Identities = 66/296 (22%), Positives = 116/296 (39%), Gaps = 47/296 (15%)

Query: 3   NSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQ 57
           + +S+   P    +    A++TG A  IG +     H+ G +V I     A+   +L  +
Sbjct: 8   HHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADE 67

Query: 58  VCQSLGGEPDTFFCHCDVTKEEDVCSAV----DLTVEKFGTLDIMVNNAGIS-GAPCPDI 112
           + +          C  D+T    + ++     +     FG  D++VNNA      P    
Sbjct: 68  LNKERSNT--AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQG 125

Query: 113 READL-------SEFEKVFDINVKGVFHGMKHAARIM------IPQTKGTIISICSVAGA 159
              D        ++  ++   N    F      A+           +  +I+++C     
Sbjct: 126 DHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVD 185

Query: 160 IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA 219
              +    Y   KHA++GL ++ A EL  YGIRVN V+P           + EE      
Sbjct: 186 QPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLL---PVAMGEE------ 236

Query: 220 MVGFRNFVARNANMQGTEL-----TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                    ++   +   L     +A  +A+AV+FL S  A+YI+G+ + VDGG +
Sbjct: 237 --------EKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  206 bits (527), Expect = 3e-66
 Identities = 66/285 (23%), Positives = 110/285 (38%), Gaps = 37/285 (12%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLG 63
           +  + +      A+ITGGA  IG S     H+ G +V +           L  ++  +  
Sbjct: 2   NETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA 61

Query: 64  GEPDTFFCHCDVTKEEDVCSA----VDLTVEKFGTLDIMVNNAGI---------SGAPCP 110
           G      C  D++    +       +D +   FG  D++VNNA                 
Sbjct: 62  GS--AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGA 119

Query: 111 DIREADLSEFEKVFDINVKGVFHGMKHAARIMIP-----QTKGTIISICSVAGAIGGLGP 165
              +   ++  ++F  N       ++  AR             +++++C     +   G 
Sbjct: 120 ADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGF 179

Query: 166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRN 225
             YT +KHA+ GL +  A EL    IRVN V+P       A+    +EE      +G   
Sbjct: 180 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLG--- 236

Query: 226 FVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                   +    +A  +A+A+ FL S +A YI+GT L VDGG  
Sbjct: 237 ------QSEA---SAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  206 bits (527), Expect = 3e-66
 Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 27/267 (10%)

Query: 15  RLVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVCQSLGGEPD 67
            L G+V ++TG  G  G+G    R   + GA V I         +   +++ ++ G +  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIK-- 74

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDI 126
                C V   E     V   V  FG +D  + NAG +  +   D        +  V  +
Sbjct: 75  AKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEA---WNHVVQV 131

Query: 127 NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAA 184
           ++ G FH  K        +  G+++   S++G I        +Y  +K   + + +++A 
Sbjct: 132 DLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLAN 191

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E   +  RVN +SP  + TGL+   +P+E +       + + +       G +  A ++ 
Sbjct: 192 EWRDF-ARVNSISPGYIDTGLS-DFVPKETQQL-----WHSMIP-----MGRDGLAKELK 239

Query: 245 NAVLFLASDEARYISGTNLMVDGGFTS 271
            A ++ ASD + Y +G +L++DGG+T+
Sbjct: 240 GAYVYFASDASTYTTGADLLIDGGYTT 266

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  205 bits (524), Expect = 6e-66
 Identities = 76/266 (28%), Positives = 112/266 (42%), Gaps = 29/266 (10%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQV---CQSLGGEPDTF 69
           QR   R  ++ G    IG +    F + GA V +       G        + LG      
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRS--AL 61

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D+T   +V +A+    +KFG +  +V+ AG   A    I E D + + +V D+N+ 
Sbjct: 62  AIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKT-IAEMDEAFWHQVLDVNLT 120

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGK 188
            +F   K A   M     G I++  S AG  GG  G  AY  SK AV+   + +A E+G 
Sbjct: 121 SLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP 178

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
             IRVN V P  ++T        + E  E                  T L    ++ DVA
Sbjct: 179 -KIRVNAVCPGMISTTF-HDTFTKPEVRERVA-------------GATSLKREGSSEDVA 223

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
             V FLASD+A Y++G    ++GG  
Sbjct: 224 GLVAFLASDDAAYVTGACYDINGGVL 249

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  205 bits (524), Expect = 1e-65
 Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 19/263 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQV---CQSLGGEPDTFF 70
           +    VA++TGG  GIG    R     G  + I  + D  G   V      LG      F
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR--VIF 83

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D+       + VD  V +FG +D +VNNAGI+     D  +     F+ +  +N++G
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRG 143

Query: 131 VFHGMKHAARIMI---PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
                +   + M+    +   +II+I SV+  +       Y  SK  +   ++ +A  L 
Sbjct: 144 TVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLA 203

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           + GI V  V P  + + +  A +  +      +      + R            D+ N V
Sbjct: 204 ETGIAVFEVRPGIIRSDM-TAAVSGKYD--GLIESGLVPMRRWG-------EPEDIGNIV 253

Query: 248 LFLASDEARYISGTNLMVDGGFT 270
             LA  +  + +G+ +  DGG +
Sbjct: 254 AGLAGGQFGFATGSVIQADGGLS 276

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  202 bits (517), Expect = 8e-65
 Identities = 71/263 (26%), Positives = 106/263 (40%), Gaps = 28/263 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCH 72
            L GR  ++TGG  GIG     +F + GA V +A             L   G        
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDINVKG 130
            DV+      +     VE+FG +D++  NAG+     PD   A ++      +F +NV G
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF----PDAPLATMTPEQLNGIFAVNVNG 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGPHAYTGSKHAVLGLNKNVAAELGKY 189
            F+ ++     +I    G ++   S+ G I G  G   Y  +K A LG  +  A EL  +
Sbjct: 123 TFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPH 182

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
            I VN + P  + T   L    EE                 +  +        T  D+ +
Sbjct: 183 KITVNAIMPGNIMTEG-LLENGEE--------------YIASMARSIPAGALGTPEDIGH 227

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
              FLA+ EA YI+G  + VDGG
Sbjct: 228 LAAFLATKEAGYITGQAIAVDGG 250

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  201 bits (513), Expect = 2e-64
 Identities = 55/252 (21%), Positives = 91/252 (36%), Gaps = 34/252 (13%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADV--------QDNLGQQV--CQSLGGEPDT 68
            + LITG   GIG +    F +        +           +L +    C++ G   DT
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                D++   DV       VE++G +D +VNNAG+       + +    +F+   + N+
Sbjct: 63  I--TADISDMADVRRLTTHIVERYGHIDCLVNNAGV--GRFGALSDLTEEDFDYTMNTNL 118

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           KG F   +    +M  Q  G I  I SVA          Y  SK    GL + +     K
Sbjct: 119 KGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARK 178

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
             +R+  V P AV T +    + +E +                      +   D+A  V+
Sbjct: 179 CNVRITDVQPGAVYTPMW-GKVDDEMQ-------------------ALMMMPEDIAAPVV 218

Query: 249 FLASDEARYISG 260
                 +R +  
Sbjct: 219 QAYLQPSRTVVE 230

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  203 bits (518), Expect = 2e-64
 Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 5/247 (2%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCH 72
               GR A++TGGA+GIG +T   F + GA++ ++DV     +Q    L G+  D     
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV   +++    D      G +D++ +NAGI  A    + + +  ++  V DI++ G  
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAG--PLAQMNHDDWRWVIDIDLWGSI 144

Query: 133 HGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           H ++     ++ Q T G I    S AG +   G   Y  +K+ V+GL + +A E+   GI
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGI 204

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
            V+ + P  V T L +++       +  M             Q   ++A+DVA       
Sbjct: 205 GVSVLCPMVVETKL-VSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAI 263

Query: 252 SDEARYI 258
                YI
Sbjct: 264 LANRLYI 270

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  202 bits (516), Expect = 2e-64
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 18/262 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L GR+AL+TGG+ GIG+   +   + GA+V I              L    D      D
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPAD 85

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFH 133
           ++ E           E    LDI+VNNAG S GA       +    +EKV  +NV  VF 
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSG---WEKVMQLNVTSVFS 142

Query: 134 GMKHAARIM----IPQTKGTIISICSVAGAIG-GLGPHAYTGSKHAVLGLNKNVAAELGK 188
            ++    ++      +    +I+I SVAG    G   +AY  SK A+  L++ +A EL  
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
             I VN ++P    + +   H+  + +  +A       + R            ++A   +
Sbjct: 203 EHINVNVIAPGRFPSRMT-RHIANDPQALEADSA-SIPMGRWG-------RPEEMAALAI 253

Query: 249 FLASDEARYISGTNLMVDGGFT 270
            LA     Y++G  + +DGGF 
Sbjct: 254 SLAGTAGAYMTGNVIPIDGGFH 275

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  202 bits (515), Expect = 2e-64
 Identities = 76/263 (28%), Positives = 113/263 (42%), Gaps = 25/263 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQV---CQSLGGEPDTFFC 71
               V L+TGG+ GIG +  RL  + G +V +    +      V       GGE      
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGE--AVAI 81

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV    D+ +       +FG LD +VNNAGI   P   + E  +   E++  +NV G 
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQR-VDEMSVERIERMLRVNVTGS 140

Query: 132 FHGMKHAARIMIPQTK---GTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELG 187
                 A R M        G I+++ S+A  +G    +  Y  SK A+      +A E+ 
Sbjct: 141 ILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVA 200

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVAN 245
             GIRVN V P  + T L  +    +   E         +A +  MQ  G      +VA+
Sbjct: 201 AEGIRVNAVRPGIIETDLHASGGLPDRARE---------MAPSVPMQRAGM---PEEVAD 248

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
           A+L+L S  A Y++G+ L V GG
Sbjct: 249 AILYLLSPSASYVTGSILNVSGG 271

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  200 bits (512), Expect = 3e-64
 Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 23/256 (8%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGG+ GIG +        G +V IA       ++  QSLG          D+ K+
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP---EEAAQSLGAV----PLPTDLEKD 55

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            D    V   +E  G L ++V+ A ++   P  ++   +   + +V  +++   F   + 
Sbjct: 56  -DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEE---WRRVLYLHLDVAFLLAQA 111

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           AA  M     G ++ I SV     G      AYT +K A+LGL + +A E  + GIRVN 
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNL 171

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           + P  V T      L +     + +   R  + R A          ++A     L  DEA
Sbjct: 172 LCPGYVETEFT-LPLRQNPELYEPITA-RIPMGRWA-------RPEEIARVAAVLCGDEA 222

Query: 256 RYISGTNLMVDGGFTS 271
            Y++G  + VDGGF +
Sbjct: 223 EYLTGQAVAVDGGFLA 238

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  201 bits (513), Expect = 3e-64
 Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 24/268 (8%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
            A + + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG      F
Sbjct: 5   AACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN--CVF 62

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA----PCPDIREADLSEFEKVFDI 126
              DVT E+DV +A+ L   KFG +D+ VN AGI+ A         +   L +F++V D+
Sbjct: 63  APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122

Query: 127 NVKGVFHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           N+ G F+ ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+  
Sbjct: 123 NLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 182

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
            +A +L   GIRV  ++P    T L L  LPE+    + +     F +R           
Sbjct: 183 PIARDLAPIGIRVMTIAPGLFGTPL-LTSLPEKVC--NFLASQVPFPSRLG-------DP 232

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGG 268
            + A+ V  +   E  +++G  + +DG 
Sbjct: 233 AEYAHLVQAII--ENPFLNGEVIRLDGA 258

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  202 bits (515), Expect = 4e-64
 Identities = 76/274 (27%), Positives = 114/274 (41%), Gaps = 28/274 (10%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG 63
           S        +  L  R  L+TGG  GIG     +F + GA V +A         V   LG
Sbjct: 27  SAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELG 86

Query: 64  --GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE-- 119
             G  +      DV+       A    V+ FG LD++  NAGI     P+ R   ++   
Sbjct: 87  ELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIF----PEARLDTMTPEQ 142

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGPHAYTGSKHAVLGL 178
             +V D+NVKG  + ++     +    +G +I   S+ G + G  G   Y  SK A LG 
Sbjct: 143 LSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGF 202

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +  A EL   G+ VN + P  + T   L  + EE                +   +   +
Sbjct: 203 MRTAAIELAPRGVTVNAILPGNILTEG-LVDMGEE--------------YISGMARSIPM 247

Query: 239 ----TANDVANAVLFLASDEARYISGTNLMVDGG 268
               +  D+ +   FLA+DEA YI+G  ++VDGG
Sbjct: 248 GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  200 bits (510), Expect = 6e-64
 Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 24/263 (9%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L  RV ++TG ++G+G +  R+  + GA V   D++   G++    LG      F + D
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAA--VRFRNAD 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR---EADLSEFEKVFDINVKGV 131
           VT E D  +A+    ++FG +  +VN AG        +       L  F +   +N+ G 
Sbjct: 62  VTNEADATAALAFAKQEFGHVHGLVNCAGT-APGEKILGRSGPHALDSFARTVAVNLIGT 120

Query: 132 FHGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           F+ ++ AA +M          +G I++  S+A   G +G  AY  SK  V  L    A E
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARE 180

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
           L ++GIRV  ++P    T + +A +P++ +  DA+     F  R          A + A 
Sbjct: 181 LARFGIRVVTIAPGIFDTPM-MAGMPQDVQ--DALAASVPFPPRLG-------RAEEYAA 230

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
            V  +   E   ++G  + +DG 
Sbjct: 231 LVKHIC--ENTMLNGEVIRLDGA 251

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  199 bits (508), Expect = 1e-63
 Identities = 60/256 (23%), Positives = 91/256 (35%), Gaps = 12/256 (4%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC---HCDVT 76
           V  ITG A+GIG +   L  + G  V   D      +    + GG           C   
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGV 62

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
            +  VC A          L + VN  G+S             +      +          
Sbjct: 63  LDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGA 122

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
               ++     G       +A    G    AY GSK+AV  L +    +    G+R+N V
Sbjct: 123 AELPMVEAMLAGDEARAIELAE-QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVV 181

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           +P AV T L L     + R  ++   F   + R +          +VA A+ FL   +A 
Sbjct: 182 APGAVETPL-LQASKADPRYGESTRRFVAPLGRGS-------EPREVAEAIAFLLGPQAS 233

Query: 257 YISGTNLMVDGGFTSV 272
           +I G+ L VDGG  ++
Sbjct: 234 FIHGSVLFVDGGMDAL 249

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  198 bits (505), Expect = 3e-63
 Identities = 82/263 (31%), Positives = 124/263 (47%), Gaps = 36/263 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL  +  LITG A GIG +T+ LF K GA++   D+++   ++  +++G  P       D
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP----VVMD 57

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVK 129
           V     V       +   G LD +V+ AGI        R+         ++E V  +N+ 
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNLT 110

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           G F   K A+  M  +  G+I+   S    +G LG   Y  S   V+GL + +A ELG++
Sbjct: 111 GSFLVAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRW 169

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
           GIRVN ++P  + T +  A +PE+               R   +  T L       +VA 
Sbjct: 170 GIRVNTLAPGFIETRM-TAKVPEK--------------VREKAIAATPLGRAGKPLEVAY 214

Query: 246 AVLFLASDEARYISGTNLMVDGG 268
           A LFL SDE+ +I+G  L VDGG
Sbjct: 215 AALFLLSDESSFITGQVLFVDGG 237

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  199 bits (508), Expect = 3e-63
 Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 19/271 (7%)

Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGG 64
            P    L G+VAL+TG   GIG        + G KV +      +  + +   + +  G 
Sbjct: 21  GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI-KKNGS 79

Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVF 124
           +        +V   ED+    +  V+ FG LDI+ +N+G+       +++    EF++VF
Sbjct: 80  D--AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVF 135

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVA 183
            IN +G F   + A + +  +  G +I + S+ G    +  HA Y+GSK A+    + +A
Sbjct: 136 TINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMA 193

Query: 184 AELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----T 239
            ++    I VN V+P  + T +  A   E     + +      V   A +Q + L     
Sbjct: 194 IDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSN--EEVDEYAAVQWSPLRRVGL 251

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGGFT 270
             D+A  V FLAS++  +++G  + +DGG  
Sbjct: 252 PIDIARVVCFLASNDGGWVTGKVIGIDGGAC 282

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  197 bits (504), Expect = 9e-63
 Identities = 61/271 (22%), Positives = 100/271 (36%), Gaps = 37/271 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----------CQSLGG 64
            L G+   ITG + GIG +      + GA V IA        ++            + GG
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 65  EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKV 123
           +       CD+ +E+ V +AV  TV+ FG +DI+VNNA         D        F+ +
Sbjct: 63  Q--GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKR---FDLM 117

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPH-AYTGSKHAVLGLNKN 181
             +N +G F   +     ++      I+++           G H  YT +K  +  +   
Sbjct: 118 QQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLG 177

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +AAE G  G+ +N + P  V    A+  LP  +    A                      
Sbjct: 178 LAAEFGPQGVAINALWPRTVIATDAINMLPGVDA---AACR----------------RPE 218

Query: 242 DVANAVLFLASDEARYISGTNLMVDGGFTSV 272
            +A+A   + + EA    G  L+ D      
Sbjct: 219 IMADAAHAVLTREAAGFHGQFLIDDEVLAQA 249

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  197 bits (504), Expect = 1e-62
 Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 27/281 (9%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS 61
            +S        +      VAL+TG  +GIG    R   K G +V +    +   +   + 
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65

Query: 62  L---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADL 117
           L   G E D     CDV    ++ + V   VE++G +D++VNNAG  G     ++ +   
Sbjct: 66  LREAGVEADGR--TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL- 122

Query: 118 SEFEKVFDINVKGVFHGMKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
             +  V + N+ GVF   K   +   M+ +  G I++I S  G  G +    Y+ SKH V
Sbjct: 123 --WLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 180

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNA 231
           +G  K +  EL + GI VN V P  V T     +   +    E + +         A + 
Sbjct: 181 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEE--------AFDR 232

Query: 232 NMQGTEL----TANDVANAVLFLASDEARYISGTNLMVDGG 268
                 +      ++VA  V +L    A  ++   L V GG
Sbjct: 233 ITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  197 bits (503), Expect = 1e-62
 Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 30/277 (10%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQ 56
            +  + +          +VA++TG + GIG +        G  V I     A   + +  
Sbjct: 11  VDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAG 70

Query: 57  QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD 116
           ++ ++ GG+        DV+    V        E FG +D++VNNAGI   P   I E  
Sbjct: 71  KI-EAAGGK--ALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGI--MPLTTIAETG 125

Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
            + F++V  +N+KG F+ ++ AA+ +  +  G II++ +    +       Y  +K  V 
Sbjct: 126 DAVFDRVIAVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYAAAKAGVE 183

Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT 236
            +   ++ EL    I VN V+P   AT L L    +E               R+   +  
Sbjct: 184 AMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE--------------VRDRFAKLA 229

Query: 237 EL----TANDVANAVLFLASDEARYISGTNLMVDGGF 269
            L    T  D+A AV FLA  +  +++G  L  +GG 
Sbjct: 230 PLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI 266

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  195 bits (499), Expect = 2e-62
 Identities = 43/260 (16%), Positives = 93/260 (35%), Gaps = 26/260 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           +     ++TG  +G+G +      + G +V +   +    QQ    LG          D+
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNA--VIGIVADL 58

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
              EDV  A    VE  G  +++++ AG        +      +  +V + N+       
Sbjct: 59  AHHEDVDVAFAAAVEWGGLPELVLHCAGT--GEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +   R++  +  G + ++ S A  +G      Y  SK  + G  +++ AEL    +R+  
Sbjct: 117 QQTVRLIG-ERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVN 175

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF-LASDE 254
           + P  + +                      +   +       +T  D A  +L  L +  
Sbjct: 176 LYPSGIRSEF--------------------WDNTDHVDPSGFMTPEDAAAYMLDALEARS 215

Query: 255 ARYISGTNLMVDGGFTSVNH 274
           + +++   +  + G    +H
Sbjct: 216 SCHVTDLFIGRNEGHHHHHH 235

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  196 bits (501), Expect = 2e-62
 Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 27/270 (10%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-------ADVQDNLGQQVCQS 61
           S      L  +V +I GG   +G  T + F      + +       +D  + L  ++ + 
Sbjct: 2   SLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL-ED 60

Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGI-SGAPCPDIREADLSEF 120
            G +        D++ EE+V    D   ++FG +DI +N  G     P  +  EA+   F
Sbjct: 61  QGAK--VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAE---F 115

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
           + +  IN K  +  +K AA+ M     G II+I +   A        Y G+K  V    +
Sbjct: 116 DAMDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTR 173

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
             + EL K  I VN ++P  + T         +E T            ++  M       
Sbjct: 174 AASKELMKQQISVNAIAPGPMDTSFFYG-QETKESTA---------FHKSQAMGNQLTKI 223

Query: 241 NDVANAVLFLASDEARYISGTNLMVDGGFT 270
            D+A  + FL +D   +I+G  +  +GG+T
Sbjct: 224 EDIAPIIKFLTTD-GWWINGQTIFANGGYT 252

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  196 bits (500), Expect = 3e-62
 Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 20/279 (7%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLG 55
           M +  +   +    RL G+VAL+TG   GIG +      + GAKV +         + + 
Sbjct: 1   MPHVENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVV 60

Query: 56  QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA 115
            ++ ++LG +        D+ +  ++    D  V  FG LDI V+N+G+       +++ 
Sbjct: 61  SEI-KALGSD--AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV--VSFGHLKDV 115

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHA 174
              EF++VF +N +G F   + A R +     G I+   S       +  H+ Y+GSK A
Sbjct: 116 TEEEFDRVFSLNTRGQFFVAREAYRHLTEG--GRIVLTSSNTSKDFSVPKHSLYSGSKGA 173

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           V    +  + + G   I VN V+P    T +             +    +    +     
Sbjct: 174 VDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQ---RQQMAAH 230

Query: 235 GTEL----TANDVANAVLFLASDEARYISGTNLMVDGGF 269
            + L       DVAN V FL S E  +++G  L +DGG 
Sbjct: 231 ASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  195 bits (498), Expect = 8e-62
 Identities = 83/276 (30%), Positives = 117/276 (42%), Gaps = 19/276 (6%)

Query: 3   NSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL 62
           + +S            + A +TG ++GIG +  R     G  V                L
Sbjct: 9   HHSSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL 68

Query: 63  ---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLS 118
              G + D     CDVT  ++V +AV   VE+FG + I+VN+AG +G     D+ +A   
Sbjct: 69  RAAGHDVDGS--SCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDAL-- 124

Query: 119 EFEKVFDINVKGVFHGMKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
            +  V D N+ GVF   +   R   M     G I++I S  G  G +    YT SKH V+
Sbjct: 125 -WADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVV 183

Query: 177 GLNKNVAAELGKYGIRVNCVSPYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNAN 232
           G  K+V  EL K GI VN V P  V T     +   +      TE  +     F A+   
Sbjct: 184 GFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVH--ERFNAKIP- 240

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
             G   T  +VA  V +L +D A  I+   L V GG
Sbjct: 241 -LGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG 275

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  195 bits (497), Expect = 1e-61
 Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 19/277 (6%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQ 56
           ++  S+  S A + L G+VAL TG   GIG        + GA V +     +   + +  
Sbjct: 5   ADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVA 64

Query: 57  QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD 116
           ++ + LG +        D++K  +V +  D  V  FG LD +++N+G+      D  E  
Sbjct: 65  EL-KKLGAQ--GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVT 119

Query: 117 LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAV 175
              F+KVF++N +G F   +   +    +  G II   S+A  + G+  HA Y GSK AV
Sbjct: 120 QELFDKVFNLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAV 177

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
            G  +  A + G  G+ VNC++P  V T +   +           +         ANM  
Sbjct: 178 EGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM-- 235

Query: 236 TEL----TANDVANAVLFLASDEARYISGTNLMVDGG 268
             L       D+  AV  L  +E+ +I+G  + + GG
Sbjct: 236 NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  191 bits (489), Expect = 8e-61
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 29/260 (11%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+VAL+TG + GIG++   L  + GAKV      ++  Q +   LG          +V
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN--GKGMALNV 64

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVF 132
           T  E + + +    ++FG +DI+VNNAGI+     D   +R  +  E+  + + N+  +F
Sbjct: 65  TNPESIEAVLKAITDEFGGVDILVNNAGIT----RDNLLMRMKE-EEWSDIMETNLTSIF 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K   R M+ + +G II++ SV G +G  G   Y  +K  V+G  K++A E+   G+ 
Sbjct: 120 RLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 179

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VN V+P  + T +    L +E               R A +            ++A+AV 
Sbjct: 180 VNTVAPGFIETDMT-KALNDE--------------QRTATLAQVPAGRLGDPREIASAVA 224

Query: 249 FLASDEARYISGTNLMVDGG 268
           FLAS EA YI+G  L V+GG
Sbjct: 225 FLASPEAAYITGETLHVNGG 244

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  193 bits (493), Expect = 2e-60
 Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 12/255 (4%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFF 70
           +   GR A +TGGA G+G   VR     G KV IAD++ +   +   +L   G  P+   
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV   E    A D    +FG + I+ NNAG+       I E+   +++ +  +N+ G
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGV--NLFQPIEESSYDDWDWLLGVNLHG 121

Query: 131 VFHGMKHAARIMI------PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           V +G+      M+       Q  G +++  S+A  +    P  Y  +K AV GL++++  
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHY 181

Query: 185 ELGKYGIRVNCVSPYAVATGLAL-AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV 243
            L KY I V+ + P  V + +     +  +    +     +  V R A +    +  + +
Sbjct: 182 SLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI 241

Query: 244 ANAVLFLASDEARYI 258
              V+        +I
Sbjct: 242 GARVIEAMKANRLHI 256

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  191 bits (487), Expect = 2e-60
 Identities = 46/245 (18%), Positives = 82/245 (33%), Gaps = 21/245 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFC 71
                   + G    IG    + F   G  V            +   +   GG       
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR--IVAR 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             D   E++V + ++   +    L++ + N G      P I E     F KV+++     
Sbjct: 62  SLDARNEDEVTAFLN-AADAHAPLEVTIFNVGA-NVNFP-ILETTDRVFRKVWEMACWAG 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   + +AR+M+   +G I    + A   GG G  A+  +K  +  + +++A EL    I
Sbjct: 119 FVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 192 RV-NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
            V + +    V T   +    E+   +DA+                 +    VA A   L
Sbjct: 179 HVAHLIIDSGVDTAW-VRERREQMFGKDALANPDLL-----------MPPAAVAGAYWQL 226

Query: 251 ASDEA 255
                
Sbjct: 227 YQQPK 231

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  191 bits (488), Expect = 2e-60
 Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 25/273 (9%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQV 58
           +    S      L G+ A +TGG+ GIG +  +     GA V +     A+    +  ++
Sbjct: 17  NLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI 76

Query: 59  CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS 118
            +  GG         D    E +  A+  TVE  G LDI+VN+AGI       + E  ++
Sbjct: 77  -EQAGGR--AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGI--WHSAPLEETTVA 131

Query: 119 EFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS-VAGAIGGLGPHAYTGSKHAVLG 177
           +F++V  +N +  F  ++ A+R +     G II+I S +A  +   G   Y+ SK A+ G
Sbjct: 132 DFDEVMAVNFRAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAG 189

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
           L K +A +LG  GI VN V P +  T +  A   +    +   +   ++        G  
Sbjct: 190 LTKGLARDLGPRGITVNIVHPGSTDTDMNPA-DGDHAEAQRERIATGSY--------GE- 239

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
               D+A  V +LA  + ++++G +L +DGG  
Sbjct: 240 --PQDIAGLVAWLAGPQGKFVTGASLTIDGGAN 270

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  190 bits (484), Expect = 4e-60
 Identities = 75/238 (31%), Positives = 104/238 (43%), Gaps = 27/238 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
             +    LITG + GIGE+T RL H  G +V +    +   Q +   L G         D
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG---ALPLPGD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V +E D   AV    E FG L  +VNNAG+       + E  L E+  V D N+ G F G
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGV--GVMKPVHELTLEEWRLVLDTNLTGAFLG 116

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++HA   ++ +  GTI+++ S+AG     G  AY  SK  +LGL      +L +  +RV 
Sbjct: 117 IRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVV 176

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            V P +V TG A  + P +                        L   DVA AVLF   
Sbjct: 177 NVLPGSVDTGFA-GNTPGQAWK---------------------LKPEDVAQAVLFALE 212

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  191 bits (488), Expect = 4e-60
 Identities = 62/273 (22%), Positives = 98/273 (35%), Gaps = 35/273 (12%)

Query: 11  PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----------CQ 60
           P    L G+   I+GG+ GIG +  +     GA V +         ++           +
Sbjct: 2   PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE 61

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
             GG+        D+   + V +AV  TVE+FG +DI VNNA         I E  L  F
Sbjct: 62  EAGGQ--ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASA--INLGSIEEVPLKRF 117

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGPHAYTGSKHAVLGLN 179
           + +  I V+G +   +     M  +    I+++          L P  Y  +K+ +    
Sbjct: 118 DLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCA 177

Query: 180 KNVAAELGKYGIRVNCVSP-YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
             +A EL   GI  N + P   VAT      L  +E    AM   R              
Sbjct: 178 LGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDE----AMARSR-------------- 219

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFTS 271
                A+A   + +  + Y  G  L+ +     
Sbjct: 220 KPEVYADAAYVVLNKPSSYT-GNTLLCEDVLLE 251

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  190 bits (485), Expect = 4e-60
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 19/261 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ---SLGGEPDTFFC 71
            + G+V ++TG + GIG        K GA V I     +  + V Q   SLGG+      
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQ--CVPV 59

Query: 72  HCDVTKEEDVCSAVD-LTVEKFGTLDIMVNNAGISGAPCPDIR-----EADLSEFEKVFD 125
            CD ++E +V S  + +  E+ G LD++VNNA        + R     E   S ++ + +
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
           + ++G +    + AR+M+P  +G I+ I S    +  +    Y   K A   L  + A E
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAADCAHE 178

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN 245
           L ++G+    + P  V T L   H+ +EE  +D ++        +A       T      
Sbjct: 179 LRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAE------TTELSGK 232

Query: 246 AVLFLASDEAR-YISGTNLMV 265
            V+ LA+D     +SG  L  
Sbjct: 233 CVVALATDPNILSLSGKVLPS 253

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  189 bits (483), Expect = 5e-60
 Identities = 42/263 (15%), Positives = 81/263 (30%), Gaps = 33/263 (12%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
                R  L+ GG   +G   V+ F      V   DV +N                    
Sbjct: 3   ASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-------EEASASVIVKMTD 55

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
             T++ D  +A    +     +D ++  AG   A      ++     + ++  ++     
Sbjct: 56  SFTEQADQVTAEVGKLLGDQKVDAILCVAGG-WAGGNAKSKSLFKNCDLMWKQSIWTSTI 114

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYGI 191
               A + +  +  G +    + A   G  G   Y  +K AV  L +++A +      G 
Sbjct: 115 SSHLATKHL--KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
               V P  + T +    +PE +        F ++                +        
Sbjct: 173 AAIAVLPVTLDTPMNRKSMPEAD--------FSSWT-----------PLEFLVETFHDWI 213

Query: 252 SDEARYISGTNLMV--DGGFTSV 272
           +   R  SG+ + V    G T +
Sbjct: 214 TGNKRPNSGSLIQVVTTDGKTEL 236

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  190 bits (485), Expect = 5e-60
 Identities = 69/270 (25%), Positives = 105/270 (38%), Gaps = 39/270 (14%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----CQSLGGEPDTFF 70
               R ALIT G  G+G+         G  V +    D    +      + +       F
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER--LQF 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL------SEFEKVF 124
              DVTK+ED+   V+  +  FG +D ++NNAG      P + E          E+ ++ 
Sbjct: 62  VQADVTKKEDLHKIVEEAMSHFGKIDFLINNAG------PYVFERKKLVDYEEDEWNEMI 115

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTII--SICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
             N+  VFH +K    +M  Q  G II         A G +   A+  +K  ++ L K V
Sbjct: 116 QGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTV 175

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL---- 238
           A E  +YGI  N V P  +   +      +E              AR      T +    
Sbjct: 176 AYEEAEYGITANMVCPGDIIGEM-KEATIQE--------------ARQLKEHNTPIGRSG 220

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
           T  D+A  + FL  D++  I+GT + V G 
Sbjct: 221 TGEDIARTISFLCEDDSDMITGTIIEVTGA 250

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  190 bits (485), Expect = 6e-60
 Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 41/274 (14%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-------- 65
            RL   +AL+TG  +GIG +        GA V   D+     Q+  + LGG         
Sbjct: 3   NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREADL-----SE 119
            +      DV++       ++     F     ++V+ AGI        ++  L      +
Sbjct: 63  GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI-------TQDEFLLHMSEDD 115

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
           ++KV  +N+KG F   + AA+ ++    +G+II+I S+ G +G +G   Y  SK  V+GL
Sbjct: 116 WDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGL 175

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +  A ELG++GIR N V P  +AT +    +P++                +   +   +
Sbjct: 176 TQTAARELGRHGIRCNSVLPGFIATPM-TQKVPQK--------------VVDKITEMIPM 220

Query: 239 ----TANDVANAVLFLASDEARYISGTNLMVDGG 268
                  DVA+ V FLAS+++ YI+GT++ V GG
Sbjct: 221 GHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG 254

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  190 bits (484), Expect = 8e-60
 Identities = 45/260 (17%), Positives = 93/260 (35%), Gaps = 31/260 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L     LITG +  +G        +HG +V I+   ++      +  G        + D
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVA----LYGD 79

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            + E  + + +DL   +  +L  +V+NA        +    +   F ++F +++   +  
Sbjct: 80  FSCETGIMAFIDLLKTQTSSLRAVVHNASEWL---AETPGEEADNFTRMFSVHMLAPYLI 136

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
             H   ++       I+ I       G     AY  +K  +  L  + AA      ++VN
Sbjct: 137 NLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVN 195

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFL 250
            ++P  +          + +              R   +  + L     A  +  ++ +L
Sbjct: 196 GIAPALLMF--------QPKDDAA---------YRANALAKSALGIEPGAEVIYQSLRYL 238

Query: 251 ASDEARYISGTNLMVDGGFT 270
               + Y++GT L V+GG  
Sbjct: 239 LD--STYVTGTTLTVNGGRH 256

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  189 bits (483), Expect = 1e-59
 Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 29/270 (10%)

Query: 6   STDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE 65
            T    ++ +L GR AL+TG   GIGE+  R FH  GA V +   +++  +++   LG +
Sbjct: 15  QTQGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD 74

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEK 122
              F    +++  + +    ++   +   +DI+VNNAGI+     D   +R  D  +++ 
Sbjct: 75  VFVF--SANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT----RDGLFVRMQD-QDWDD 127

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           V  +N+       +     M+ +  G II+I S+ G +G  G   Y  +K  ++G +K +
Sbjct: 128 VLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKAL 187

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL---- 238
           A E+    I VNC++P  + + +    L E+               + A M    +    
Sbjct: 188 AQEIASRNITVNCIAPGFIKSAMT-DKLNEK--------------QKEAIMAMIPMKRMG 232

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
              ++A A ++LASDEA Y++G  L ++GG
Sbjct: 233 IGEEIAFATVYLASDEAAYLTGQTLHINGG 262

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  188 bits (479), Expect = 3e-59
 Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 37/267 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQ---SLGGEPDTFF 70
           +L G+ A++TG + G+G++        GA + +             +   + G       
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVA- 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFD 125
              DV   EDV + V   ++ FG +DI+VNNAGI+       R+  +      +++ V +
Sbjct: 61  -KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT-------RDTLMLKMSEKDWDDVLN 112

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
            N+K  +   K  ++IM+ Q  G II+I S+AG IG  G   Y  SK  ++G  K++A E
Sbjct: 113 TNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKE 172

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAN 241
               GI  N V+P  + T +    LP++               +   +    L    T  
Sbjct: 173 FAAKGIYCNAVAPGIIKTDM-TDVLPDK--------------VKEMYLNNIPLKRFGTPE 217

Query: 242 DVANAVLFLASDEARYISGTNLMVDGG 268
           +VAN V FLASD++ YI+G  + +DGG
Sbjct: 218 EVANVVGFLASDDSNYITGQVINIDGG 244

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  187 bits (478), Expect = 5e-59
 Identities = 81/264 (30%), Positives = 126/264 (47%), Gaps = 28/264 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            +   VA++TGGA+G+G +T +     GA+V + D++   G+ V   LG      F   D
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDR--ARFAAAD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE--ADLSEFEKVFDINVKGVF 132
           VT E  V SA+D   E  GTL I+VN AG   A     R+    L+ F K+ DIN+ G F
Sbjct: 61  VTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119

Query: 133 HGMKHAARIMI--------PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           + ++ AA  +          + +G II+  SVA   G +G  AY+ SK  V+G+   +A 
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           +L  + IRV  ++P    T L LA LPEE R   ++       +R           ++  
Sbjct: 180 DLASHRIRVMTIAPGLFDTPL-LASLPEEAR--ASLGKQVPHPSRLG-------NPDEYG 229

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
              + +   E   ++G  + +DG 
Sbjct: 230 ALAVHII--ENPMLNGEVIRLDGA 251

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  188 bits (481), Expect = 6e-59
 Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 19/259 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDTF 69
           RL  R AL+TGG +GIG +    + + GA V I  +          + + +  G +    
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKA--V 103

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
               D++ E    S V    E  G LDI+   AG      P+I++    +F++ F +NV 
Sbjct: 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGK-QTAIPEIKDLTSEQFQQTFAVNVF 162

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
            +F   + A  ++      +II+  S+           Y  +K A+L  ++ +A ++ + 
Sbjct: 163 ALFWITQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           GIRVN V+P  + T L ++    +++      G +  + R            ++A   ++
Sbjct: 221 GIRVNIVAPGPIWTALQISGGQTQDKIPQ--FGQQTPMKRAG-------QPAELAPVYVY 271

Query: 250 LASDEARYISGTNLMVDGG 268
           LAS E+ Y++     V GG
Sbjct: 272 LASQESSYVTAEVHGVCGG 290

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  188 bits (480), Expect = 7e-59
 Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 36/280 (12%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+  +             +VAL+TG   GIG    ++  K  + V            V  
Sbjct: 27  MNLLSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVD 86

Query: 61  SL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL 117
            +   G E   +    DV+K+E++   ++  + +   +DI+VNNAGI+       R+   
Sbjct: 87  EIKSFGYESSGY--AGDVSKKEEISEVINKILTEHKNVDILVNNAGIT-------RDNLF 137

Query: 118 -----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK 172
                 E+E V   N+  +F+  +  ++ MI    G II+I S+ G  G +G   Y+ SK
Sbjct: 138 LRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSK 197

Query: 173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
             V+G  K++A EL    I VN ++P  +++ +    + E+               +   
Sbjct: 198 AGVIGFTKSLAKELASRNITVNAIAPGFISSDM-TDKISEQ--------------IKKNI 242

Query: 233 MQGTEL----TANDVANAVLFLASDEARYISGTNLMVDGG 268
           +         T  +VAN   FL+SD++ YI+G   ++DGG
Sbjct: 243 ISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 282

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  186 bits (475), Expect = 1e-58
 Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 33/264 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFC 71
           L G+V+L+TG   GIG +        G+ V I     +    + +++    G +      
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGV-- 62

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINV 128
             ++  EE +  A +        +DI+VNNAGI+     D   +R +   ++E+V  +N+
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT----RDKLFLRMSL-LDWEEVLKVNL 117

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G F   +++ R MI Q  G I++I SV G  G +G   Y+ +K  ++G  K++A EL  
Sbjct: 118 TGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAP 177

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
             + VN V+P  + T +  A L EE               +    +   L    +  +VA
Sbjct: 178 RNVLVNAVAPGFIETDMT-AVLSEE--------------IKQKYKEQIPLGRFGSPEEVA 222

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           N VLFL S+ A YI+G  + V+GG
Sbjct: 223 NVVLFLCSELASYITGEVIHVNGG 246

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  186 bits (475), Expect = 1e-58
 Identities = 58/286 (20%), Positives = 104/286 (36%), Gaps = 62/286 (21%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
            + +I+G ATGIG +T ++    G ++   D++D                     D++  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----------------ADLSTA 45

Query: 79  EDVCSAV-DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E    A+ D+  +    +D +V  AG+                  V  +N  G    M  
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQT---------KVLGNVVSVNYFGATELMDA 96

Query: 138 AARIMIPQ---------------------------TKGTIISICSVAGAIGGL-GPHAYT 169
               +                                G      ++    G   G  AY 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR 229
           GSK+A+    +  AA  G+ G+R+N ++P A  T L L    ++ R  +++  F   + R
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL-LQAGLQDPRYGESIAKFVPPMGR 215

Query: 230 NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHS 275
            A         +++A+ + FL S  A Y+ G  +++DGG  +V   
Sbjct: 216 RA-------EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAVMRP 254

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  186 bits (476), Expect = 1e-58
 Identities = 80/277 (28%), Positives = 129/277 (46%), Gaps = 36/277 (12%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL- 62
           + +       + L  +VA++TG + GIG +      + GA V      +   + +  +  
Sbjct: 14  AQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK 73

Query: 63  --GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL--- 117
             G E        +V     V + V+ T+++FG L+++VNNAGI+       ++      
Sbjct: 74  QAGLEGRGA--VLNVNDATAVDALVESTLKEFGALNVLVNNAGIT-------QDQLAMRM 124

Query: 118 --SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
              E++ V D N+K VF   +   R M+    G I++I SV G+ G  G   Y  +K  V
Sbjct: 125 KDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGV 184

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
            G+ + +A E+G  GI VNCV+P  + T +    LP+E               + A    
Sbjct: 185 AGMTRALAREIGSRGITVNCVAPGFIDTDM-TKGLPQE--------------QQTALKTQ 229

Query: 236 TEL----TANDVANAVLFLASDEARYISGTNLMVDGG 268
             L    +  D+A+AV FLAS +A YI+GT L V+GG
Sbjct: 230 IPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG 266

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  186 bits (474), Expect = 2e-58
 Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 28/261 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-CD 74
           L  +VAL+TG + GIG          GA V          ++   S+  +         +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGV 131
           ++  E + +       +   +DI+VNNAGI+     D   +R ++  E++ V + N+  +
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGIT----RDNLMMRMSE-DEWQSVINTNLSSI 117

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F   K   R M+ +  G IISI SV G+ G  G   Y  +K  V+G +K++A E+    I
Sbjct: 118 FRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNI 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAV 247
            VN V+P  +AT +    L +E               ++               D+A AV
Sbjct: 178 TVNVVAPGFIATDMT-DKLTDE--------------QKSFIATKIPSGQIGEPKDIAAAV 222

Query: 248 LFLASDEARYISGTNLMVDGG 268
            FLAS+EA+YI+G  L V+GG
Sbjct: 223 AFLASEEAKYITGQTLHVNGG 243

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  188 bits (480), Expect = 2e-58
 Identities = 65/307 (21%), Positives = 103/307 (33%), Gaps = 54/307 (17%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQV 58
           S        +      VAL+TG A  +G S     H  G  VC+     A   + L   +
Sbjct: 32  SGLVPRGSHMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL 91

Query: 59  CQSLGGEPDTFFCHCDVTKEED-----------------VCSAVDLTVEKFGTLDIMVNN 101
                          D++                         V      +G  D++VNN
Sbjct: 92  NARRPNS--AITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNN 149

Query: 102 AGISG-APCPDIREAD-----------LSEFEKVFDINVKGVFHGMKHAARIMIP----- 144
           A      P     E              +    +F  N    +  +K  A  +       
Sbjct: 150 ASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKH 209

Query: 145 -QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT 203
             T  +II++         LG   YT +K A+ GL ++ A EL    IRVN V P     
Sbjct: 210 RGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 269

Query: 204 GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNL 263
              +  +P                     +   + +A +V++ V+FL S +A+YI+GT +
Sbjct: 270 ---VDDMPPAVWEG---------HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCV 317

Query: 264 MVDGGFT 270
            VDGG++
Sbjct: 318 KVDGGYS 324

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  186 bits (474), Expect = 2e-58
 Identities = 87/260 (33%), Positives = 128/260 (49%), Gaps = 33/260 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+ +LITG ++GIG +  RL HK G+KV I+   +   + +  +L          C++
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE--VCNL 69

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVF 132
             +E         + K   LDI+V NAGI+     D   IR  D  +F+KV DIN+K  F
Sbjct: 70  ANKE----ECSNLISKTSNLDILVCNAGIT----SDTLAIRMKD-QDFDKVIDINLKANF 120

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              + A + MI +  G II+I S+ G  G  G   Y  SK  ++G+ K+++ E+   GI 
Sbjct: 121 ILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGIT 180

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VN V+P  + + +    L E+               R A +Q   L       DVA AV 
Sbjct: 181 VNAVAPGFIKSDMT-DKLNEK--------------QREAIVQKIPLGTYGIPEDVAYAVA 225

Query: 249 FLASDEARYISGTNLMVDGG 268
           FLAS+ A YI+G  L V+GG
Sbjct: 226 FLASNNASYITGQTLHVNGG 245

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  186 bits (475), Expect = 2e-58
 Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 21/264 (7%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCH 72
           L G+ AL+TG   GIG++        GA V I   ++    +  + +     +       
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+  E+         +EK+  +DI++NN GI      +  +    ++ K+F++N+    
Sbjct: 68  ADLGTEQGC----QDVIEKYPKVDILINNLGIFEPV--EYFDIPDEDWFKLFEVNIMSGV 121

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              +   + MI + +G +I I S A  +       Y+ +K   L L++++A       + 
Sbjct: 122 RLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVT 181

Query: 193 VNCVSPYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
           VN + P +  T     +  +  P E+ T +     + F+    N   + +       ++A
Sbjct: 182 VNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAE--KRFMK--ENRPTSIIQRLIRPEEIA 237

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           + V FL+S  +  I+G+ L +DGG
Sbjct: 238 HLVTFLSSPLSSAINGSALRIDGG 261

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  187 bits (476), Expect = 2e-58
 Identities = 64/296 (21%), Positives = 101/296 (34%), Gaps = 54/296 (18%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEPDTF 69
                VAL+TG A  +G S     H  G  VC+     A   + L   +           
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS--AI 63

Query: 70  FCHCDVTKEED-----------------VCSAVDLTVEKFGTLDIMVNNAGISG-APCPD 111
               D++                         V      +G  D++VNNA      P   
Sbjct: 64  TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR 123

Query: 112 IREAD-----------LSEFEKVFDINVKGVFHGMKHAARIMIP------QTKGTIISIC 154
             E              +    +F  N    +  +K  A  +         T  +II++ 
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 155 SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE 214
                   LG   YT +K A+ GL ++ A EL    IRVN V P        +  +P   
Sbjct: 184 DAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL---VDDMPPAV 240

Query: 215 RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                             +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 241 WEG---------HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  186 bits (474), Expect = 5e-58
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 27/262 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA------DVQDNLGQQVCQSLGGEPDT 68
           +L G+  LITGG +GIG +    F K GA + IA      D  +   +Q  +  G +   
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANET--KQYVEKEGVKCVL 101

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
                D++ E+     V  TV + G+L+I+VNN      P   +      + EK F IN+
Sbjct: 102 L--PGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQ-YPQQGLEYITAEQLEKTFRINI 158

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
              FH  K A   +  +    II+  S+    G      Y+ +K A++   ++++  L +
Sbjct: 159 FSYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQ 216

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA--RNANMQGTELTANDVANA 246
            GIRVN V+P  + T L  +   E++     +  F + V   R            ++A A
Sbjct: 217 KGIRVNGVAPGPIWTPLIPSSFDEKK-----VSQFGSNVPMQRPG-------QPYELAPA 264

Query: 247 VLFLASDEARYISGTNLMVDGG 268
            ++LAS ++ Y++G  + V+GG
Sbjct: 265 YVYLASSDSSYVTGQMIHVNGG 286

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  184 bits (470), Expect = 5e-58
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 37/266 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQV---CQSLGGEPDTFFC 71
           L G+VAL+TG + GIG +      K GA V +     +    +V    + LG +      
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAV-- 59

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDI 126
             DV   EDV + V  TV+ FG +DI+VNNAG++       ++  L      E++ V + 
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT-------KDNLLMRMKEEEWDTVINT 112

Query: 127 NVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           N+KGVF   K  +R M+ Q  G I++I SV G  G  G   Y  +K  V+GL K  A EL
Sbjct: 113 NLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKEL 172

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAND 242
               I VN ++P  +AT +    L E                +   ++         A D
Sbjct: 173 ASRNITVNAIAPGFIATDM-TDVLDEN--------------IKAEMLKLIPAAQFGEAQD 217

Query: 243 VANAVLFLASDEARYISGTNLMVDGG 268
           +ANAV F ASD+++YI+G  L VDGG
Sbjct: 218 IANAVTFFASDQSKYITGQTLNVDGG 243

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  184 bits (470), Expect = 6e-58
 Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 33/264 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSL---GGEPDTFFC 71
            + + AL+TG + GIG S      + G  V +         + V + +   G +      
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI-- 59

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINV 128
             +V   ++V + +   V +FG+LD++VNNAGI+     D   +R  +  E++ V D N+
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT----RDNLLMRMKE-QEWDDVIDTNL 114

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           KGVF+ ++ A   M+ Q  G II++ SV GA+G  G   Y  +K  V+GL K+ A EL  
Sbjct: 115 KGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELAS 174

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
            GI VN V+P  + + +    L +E               +   +    L       D+A
Sbjct: 175 RGITVNAVAPGFIVSDM-TDALSDE--------------LKEQMLTQIPLARFGQDTDIA 219

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           N V FLASD+A+YI+G  + V+GG
Sbjct: 220 NTVAFLASDKAKYITGQTIHVNGG 243

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  183 bits (468), Expect = 1e-57
 Identities = 55/238 (23%), Positives = 91/238 (38%), Gaps = 24/238 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L  ++A++TG   G+G   V+   +      +    ++L   + +  G EP       D
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIEGVEP----IESD 56

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           + KE      VD  ++    +D +V+ A +  A    I    ++E+    D+NV      
Sbjct: 57  IVKEVLEEGGVD-KLKNLDHVDTLVHAAAV--ARDTTIEAGSVAEWHAHLDLNVIVPAEL 113

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            +     +     G +I I S AG     G   Y  SKHA+ GL      E    GIRV+
Sbjct: 114 SRQLLPALR-AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
            VSP    T + L  L + + T                     +   ++ANA+ F+  
Sbjct: 173 TVSPGPTNTPM-LQGLMDSQGTN--------------FRPEIYIEPKEIANAIRFVID 215

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  183 bits (468), Expect = 1e-57
 Identities = 80/270 (29%), Positives = 118/270 (43%), Gaps = 37/270 (13%)

Query: 6   STDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE 65
           +T +  A    V R  L+TGG  GIG +  +     G KV +            +  G  
Sbjct: 3   ATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH----------RGSGAP 52

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEK 122
              F    DVT  + V  A     E  G ++++V+NAG+S     D   +R  +  +FEK
Sbjct: 53  KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS----ADAFLMRMTE-EKFEK 107

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           V + N+ G F   + A+R M     G +I I SV+G  G      Y  SK  V+G+ +++
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL---- 238
           A EL K  +  N V+P  + T +    L E                +   +Q        
Sbjct: 168 ARELSKANVTANVVAPGYIDTDMT-RALDER--------------IQQGALQFIPAKRVG 212

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGG 268
           T  +VA  V FLAS++A YISG  + VDGG
Sbjct: 213 TPAEVAGVVSFLASEDASYISGAVIPVDGG 242

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  181 bits (463), Expect = 6e-57
 Identities = 78/260 (30%), Positives = 118/260 (45%), Gaps = 30/260 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLG--GEPDTFFCHCDV 75
           R ALITG + GIG +      + G  + I         ++V +     G P       ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVF 132
            + E   + V    E  G LD +VNNAGI+     D   +R  D  ++E V + N+  VF
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGIT----RDTLLVRMKD-EDWEAVLEANLSAVF 116

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              + A ++M+    G I++I SV G +G  G   Y  SK  ++G  + VA E  + GI 
Sbjct: 117 RTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGIT 176

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           VN V+P  + T +    LP+E               + A ++           +VA AV 
Sbjct: 177 VNAVAPGFIETEMT-ERLPQE--------------VKEAYLKQIPAGRFGRPEEVAEAVA 221

Query: 249 FLASDEARYISGTNLMVDGG 268
           FL S++A YI+G  L VDGG
Sbjct: 222 FLVSEKAGYITGQTLCVDGG 241

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  180 bits (460), Expect = 2e-56
 Identities = 52/264 (19%), Positives = 107/264 (40%), Gaps = 22/264 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP---DTFFCH 72
           + G++A++T G++G+G ++     ++GA++ +        +     +             
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D+ +  D+    +      G  DI+V + G  G       E  + ++++ + +  +   
Sbjct: 65  GDIREPGDIDRLFE-KARDLGGADILVYSTG--GPRPGRFMELGVEDWDESYRLLARSAV 121

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              + AA  M+ +  G ++ I SV               +  V+G+ + +A EL  +G+ 
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181

Query: 193 VNCVSPYAVAT----GLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVA 244
           VN V P  + T     LA         T +         A  +      +       ++A
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEE--------ALKSMASRIPMGRVGKPEELA 233

Query: 245 NAVLFLASDEARYISGTNLMVDGG 268
           + V FLAS++A +I+G  + VDGG
Sbjct: 234 SVVAFLASEKASFITGAVIPVDGG 257

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  179 bits (457), Expect = 7e-56
 Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 37/260 (14%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
            + R  L+TGG  GIG +  R F   G KV I        +                CD+
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF----------LAVKCDI 68

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVF 132
           T  E V  A     E  G +++++ NAG++     D   +R ++  +F  V + N+ G F
Sbjct: 69  TDTEQVEQAYKEIEETHGPVEVLIANAGVT----KDQLLMRMSE-EDFTSVVETNLTGTF 123

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
             +K A R M+   KG ++ I SV G +G  G   Y  SK  ++G  +++A ELG   I 
Sbjct: 124 RVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNIT 183

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
            N V+P  V T +    L +E               R   +    L       ++A  V 
Sbjct: 184 FNVVAPGFVDTDMT-KVLTDE--------------QRANIVSQVPLGRYARPEEIAATVR 228

Query: 249 FLASDEARYISGTNLMVDGG 268
           FLASD+A YI+G  + VDGG
Sbjct: 229 FLASDDASYITGAVIPVDGG 248

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  179 bits (457), Expect = 1e-55
 Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 39/282 (13%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----Q 56
           M    +    P       RVA +TGG  G+G +  R  H  G  V ++  + N       
Sbjct: 9   MGTLEAQTQGPGSM-QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWL 67

Query: 57  QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD 116
              +  G +   +    DV   E      +  +  FG +D+++NNAGI+       R+A 
Sbjct: 68  MHERDAGRDFKAY--AVDVADFESCERCAEKVLADFGKVDVLINNAGIT-------RDAT 118

Query: 117 L-----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS 171
                  +++ V   ++  +F+  K     M+ +  G I++I SV G+ G  G   Y  +
Sbjct: 119 FMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASA 178

Query: 172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA 231
           K  + G  K +A E  K GI VN VSP  +AT + +  +P++                 A
Sbjct: 179 KAGIHGFTKTLALETAKRGITVNTVSPGYLATAM-VEAVPQD--------------VLEA 223

Query: 232 NMQGT----EL-TANDVANAVLFLASDEARYISGTNLMVDGG 268
            +        L   ++VA  + FL SD+A +++G +L ++GG
Sbjct: 224 KILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG 265

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  178 bits (454), Expect = 2e-55
 Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 37/267 (13%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLGGEPDTFF 70
            +  R+A +TGG  GIG S  +  HK G +V      ++       +  ++LG +     
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS- 68

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFD 125
              +V   +    A D    + G +D++VNNAGI+       R+         +++ V D
Sbjct: 69  -EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT-------RDVVFRKMTREDWQAVID 120

Query: 126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE 185
            N+  +F+  K     M+ +  G II+I SV G  G  G   Y+ +K  + G   ++A E
Sbjct: 121 TNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQE 180

Query: 186 LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TAN 241
           +   G+ VN VSP  + T + +  +  +                   +    +    + +
Sbjct: 181 VATKGVTVNTVSPGYIGTDM-VKAIRPD--------------VLEKIVATIPVRRLGSPD 225

Query: 242 DVANAVLFLASDEARYISGTNLMVDGG 268
           ++ + V +LAS+E+ + +G +  ++GG
Sbjct: 226 EIGSIVAWLASEESGFSTGADFSLNGG 252

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  177 bits (451), Expect = 3e-55
 Identities = 84/264 (31%), Positives = 129/264 (48%), Gaps = 38/264 (14%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSL---GGEPDTFFCHCD 74
            V ++TG + GIG++      K G KV +         ++V + +   GG+  TF    D
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF--GGD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVFDINVK 129
           V+KE DV + +   ++ +GT+D++VNNAGI+       R+  L     S++++V D+N+ 
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGIT-------RDTLLIRMKKSQWDEVIDLNLT 112

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
           GVF   + A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A E    
Sbjct: 113 GVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASR 172

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVAN 245
            I VN V P  +A+ +  A L E+                   +    L       +VA 
Sbjct: 173 NINVNVVCPGFIASDM-TAKLGED--------------MEKKILGTIPLGRTGQPENVAG 217

Query: 246 AVLFLA-SDEARYISGTNLMVDGG 268
            V FLA S  A YI+G    +DGG
Sbjct: 218 LVEFLALSPAASYITGQAFTIDGG 241

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  178 bits (453), Expect = 3e-55
 Identities = 90/268 (33%), Positives = 131/268 (48%), Gaps = 39/268 (14%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQ---SLGGEPDTF 69
             L  R+AL+TG + GIG +        GAKV +          +V     + GGE    
Sbjct: 24  LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADL-----SEFEKVF 124
               DV++E +V +     +E++G LD++VNNAGI+       R+  L      +++ V 
Sbjct: 84  --KADVSQESEVEALFAAVIERWGRLDVLVNNAGIT-------RDTLLLRMKRDDWQSVL 134

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           D+N+ GVF   + AA+IM+ Q  G II+I SV G +G  G   Y+ +K  V+GL K VA 
Sbjct: 135 DLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAK 194

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTED---AMVGFRNFVARNANMQGTELTAN 241
           EL   GI VN V+P  +AT +  + L  E+  E       G                 A 
Sbjct: 195 ELASRGITVNAVAPGFIATDM-TSELAAEKLLEVIPLGRYG----------------EAA 237

Query: 242 DVANAVLFLASD-EARYISGTNLMVDGG 268
           +VA  V FLA+D  A YI+G  + +DGG
Sbjct: 238 EVAGVVRFLAADPAAAYITGQVINIDGG 265

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  177 bits (450), Expect = 5e-55
 Identities = 73/258 (28%), Positives = 114/258 (44%), Gaps = 32/258 (12%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGGA+G+G +        G +V + D++      +           +   DVT+E
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI-----------YVEGDVTRE 51

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE--ADLSEFEKVFDINVKGVFHGMK 136
           EDV  AV    ++   L  +V+ AG+  A     +E    L  F +V ++N+ G F+ ++
Sbjct: 52  EDVRRAVA-RAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 110

Query: 137 HAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            AA  M          +G I++  SVA   G +G  AY  SK  V+ L    A EL  +G
Sbjct: 111 LAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWG 170

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           IRV  V+P    T L L  LPE+ +   ++     F  R            + A  VL +
Sbjct: 171 IRVVTVAPGLFDTPL-LQGLPEKAK--ASLAAQVPFPPRLG-------RPEEYAALVLHI 220

Query: 251 ASDEARYISGTNLMVDGG 268
              E   ++G  + +DG 
Sbjct: 221 L--ENPMLNGEVVRLDGA 236

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  176 bits (448), Expect = 9e-55
 Identities = 37/256 (14%), Positives = 81/256 (31%), Gaps = 32/256 (12%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           +     ++ GG   +G + +  F K+G  V   D+  N        + G       + + 
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG-------NKNW 53

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T++E        +  +   +D +   AG   A      +  +   + +   +V       
Sbjct: 54  TEQEQSILEQTASSLQGSQVDGVFCVAGG-WAGGSASSKDFVKNADLMIKQSVWSSAIAA 112

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY--GIRV 193
           K A   +  +  G +    + A          Y  +K AV  L  ++AA+         V
Sbjct: 113 KLATTHL--KPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 170

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
             + P  + T +    +P  + +                        + ++  +L   ++
Sbjct: 171 LTIMPVTLDTPMNRKWMPNADHSSWT-------------------PLSFISEHLLKWTTE 211

Query: 254 -EARYISGTNLMVDGG 268
             +R  SG  L +   
Sbjct: 212 TSSRPSSGALLKITTE 227

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  176 bits (449), Expect = 2e-54
 Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 6/195 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
           + G + LITG   GIG  T   F K  +K+ + D+  +  ++      G          D
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 88

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            +  ED+ S+      + G + I+VNNAG+      D+      + EK F++NV   F  
Sbjct: 89  CSNREDIYSSAKKVKAEIGDVSILVNNAGV--VYTSDLFATQDPQIEKTFEVNVLAHFWT 146

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL---GKYGI 191
            K     M     G I+++ S AG +      AY  SK A +G +K +  EL      G+
Sbjct: 147 TKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGV 206

Query: 192 RVNCVSPYAVATGLA 206
           +  C+ P  V TG  
Sbjct: 207 KTTCLCPNFVNTGFI 221

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  173 bits (442), Expect = 1e-53
 Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 33/271 (12%)

Query: 12  AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-----ADVQDNLGQQVCQSLGGEP 66
           A   L G+VAL+TG + GIG +  +     GA V I      +  +    ++ QS GG  
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI-QSNGGS- 58

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKF------GTLDIMVNNAGISG-APCPDIREADLSE 119
             F    ++     V +       +          DI++NNAGI   A   +  E     
Sbjct: 59  -AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQF--- 114

Query: 120 FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN 179
           F+++  +N K  F  ++ A   +  +    II+I S A  I      AY+ +K A+  + 
Sbjct: 115 FDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMT 172

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTE 237
             +A +LG  GI VN + P  V T +    L +           + +    +     G  
Sbjct: 173 FTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM--------MKQYATTISAFNRLG-- 222

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGG 268
               D+A+   FLAS ++R+++G  + V GG
Sbjct: 223 -EVEDIADTAAFLASPDSRWVTGQLIDVSGG 252

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  173 bits (441), Expect = 4e-53
 Identities = 44/251 (17%), Positives = 88/251 (35%), Gaps = 30/251 (11%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQV---CQSLGGEPDTF 69
           + L G+  ++TG + GIG        K GA V +    ++ L Q+V   C  LG      
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL-QKVVSHCLELGA-ASAH 81

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVK 129
           +    +         V    +  G LD+++ N   +     ++   D+    K  ++N  
Sbjct: 82  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN--TSLNLFHDDIHHVRKSMEVNFL 139

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG-- 187
                   A   M+ Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E    
Sbjct: 140 SYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 198

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           +  + +       + T  A+                    A +  +        + A  +
Sbjct: 199 RVNVSITLCVLGLIDTETAMK-------------------AVSGIVHMQAAPKEECALEI 239

Query: 248 LFLASDEARYI 258
           +   +     +
Sbjct: 240 IKGGALRQEEV 250

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  171 bits (435), Expect = 2e-52
 Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 24/258 (9%)

Query: 5   NSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQ 60
               + P ++R   R+AL+TG + GIG +  R   + G KV          + L  + C+
Sbjct: 19  QGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE-CK 77

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           S G         CD++ EED+ S       +   +DI +NNAG+  A    +     S +
Sbjct: 78  SAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL--ARPDTLLSGSTSGW 135

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISICSVAG--AIGGLGPHAYTGSKHAVL 176
           + +F++NV  +    + A + M  +    G II+I S++G   +     H Y+ +K+AV 
Sbjct: 136 KDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVT 195

Query: 177 GLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
            L + +  EL   +  IR  C+SP  V T  A     ++   E A   +           
Sbjct: 196 ALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD--PEKAAATYEQMKC------ 247

Query: 235 GTELTANDVANAVLFLAS 252
              L   DVA AV+++ S
Sbjct: 248 ---LKPEDVAEAVIYVLS 262

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  170 bits (432), Expect = 3e-52
 Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 36/260 (13%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           +  +  L+   + GIG +   +  + GA+V I        +++ +  G         CD+
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR----NEELLKRSGHRYVV----CDL 68

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP-DIREADLSEFEKVFDINVKGVFHG 134
            K       +DL  EK   +DI+V NAG    P      E    +F++  D     +   
Sbjct: 69  RK------DLDLLFEKVKEVDILVLNAGG---PKAGFFDELTNEDFKEAIDSLFLNMIKI 119

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           +++    M  +  G I++I S +        +    ++ A+ G  K ++ E+  YGI VN
Sbjct: 120 VRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVN 179

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVLFL 250
           CV+P    T      L EE               +        +       ++A+ V FL
Sbjct: 180 CVAPGWTETERVKELLSEE--------------KKKQVESQIPMRRMAKPEEIASVVAFL 225

Query: 251 ASDEARYISGTNLMVDGGFT 270
            S++A Y++G  ++VDGG +
Sbjct: 226 CSEKASYLTGQTIVVDGGLS 245

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  170 bits (432), Expect = 5e-52
 Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 24/253 (9%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSL 62
           ++ T      +  + ++ +ITG ++GIGE+  R F + G  + + A   + L     ++L
Sbjct: 2   ASMTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-----KAL 56

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEK 122
               +T     DVT +    +A+    + +G  D +VNNAG+       I   + +E+++
Sbjct: 57  NLP-NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGM--MLLGQIDTQEANEWQR 113

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
           +FD+NV G+ +GM+     M  +  GTII+I S+AG        AY G+K AV  +++NV
Sbjct: 114 MFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENV 173

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ---GTELT 239
             E+    +RV  ++P AV T L             +    +         +   G  L 
Sbjct: 174 REEVAASNVRVMTIAPSAVKTELL------------SHTTSQQIKDGYDAWRVDMGGVLA 221

Query: 240 ANDVANAVLFLAS 252
           A+DVA AVLF   
Sbjct: 222 ADDVARAVLFAYQ 234

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  172 bits (438), Expect = 5e-52
 Identities = 53/276 (19%), Positives = 98/276 (35%), Gaps = 36/276 (13%)

Query: 4   SNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV----- 58
              +   P   RL G    ITG + GIG++      K GA + IA        ++     
Sbjct: 31  GRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIY 90

Query: 59  -----CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIR 113
                 +++GG+     C  DV  E+ + +AV+  ++KFG +DI+VNNA        +  
Sbjct: 91  TAAEEIEAVGGK--ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASA--ISLTNTL 146

Query: 114 EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--GPHAYTGS 171
           +      + + ++N +G +   K     +       I++I               AYT +
Sbjct: 147 DTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIA 206

Query: 172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA 231
           K+ +      +A E  K  I VN + P       A+  L                     
Sbjct: 207 KYGMSMYVLGMAEEF-KGEIAVNALWPKTAIHTAAMDMLGGPGIESQCR----------- 254

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDG 267
                    + +A+A   +     +  +G  ++ + 
Sbjct: 255 -------KVDIIADAAYSIFQK-PKSFTGNFVIDEN 282

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  168 bits (428), Expect = 7e-52
 Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 32/240 (13%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIA----DVQDNLGQQVCQSLGGEPDTFFCHC 73
            +VA+ITG + GIGE+  R   + G  + +     D  + +  ++ Q  G E   F+ H 
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYHHL 59

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+K E V       +E+FG +D++V NAG+       + E    EF ++ ++N+ GV+ 
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGL--GYFKRLEELSEEEFHEMIEVNLLGVWR 117

Query: 134 GMKHAARIMIPQTKGTIISICSVAG-AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            +K     +       +++   V+   I   G   Y  +K A   L +    E     +R
Sbjct: 118 TLKAFLDSLKRTGGLALVTTSDVSARLIPYGG--GYVSTKWAARALVRTFQIE--NPDVR 173

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
              + P AV T                              +   L  +++A AV  L  
Sbjct: 174 FFELRPGAVDTYFGG-------------------SKPGKPKEKGYLKPDEIAEAVRCLLK 214

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  167 bits (426), Expect = 4e-51
 Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 21/240 (8%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCH-C 73
           ++ +V LITG + GIGE   R     GAK+ + A  Q  + + +   +     T      
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI-EAIATEIRDAGGTALAQVL 60

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVF 132
           DVT    V +     V+ +G +D++VNNAG+   +P   +    + E+E++ D+N+KGV 
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP---LAAVKVDEWERMIDVNIKGVL 117

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
            G+     IM  Q  G II+I S+           Y  +K AV  ++  +  E     IR
Sbjct: 118 WGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIR 175

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           V CV+P  V + LA     EE              A     +   L   D+A AV  +  
Sbjct: 176 VTCVNPGVVESELAGTITHEETM------------AAMDTYRAIALQPADIARAVRQVIE 223

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  166 bits (423), Expect = 6e-51
 Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 20/243 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCH 72
             L G+VALITG ++GIGE+T R     GA V I A   + L + +   L          
Sbjct: 3   SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKL-RALGDELTAAGAKVHVL 61

Query: 73  -CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV   + V +AV  TVE  G LDI+VNNAGI       + +AD +++ ++ D N+ G+
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGI--MLLGPVEDADTTDWTRMIDTNLLGL 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            +  + A   ++ ++KGT++ + S+AG +       Y  +K  V   ++ +  E+ + G+
Sbjct: 120 MYMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-MQGTE-LTANDVANAVLF 249
           RV  + P    T L               +            +     L A D+A AV +
Sbjct: 179 RVVVIEPGTTDTELR------------GHITHTATKEMYEQRISQIRKLQAQDIAEAVRY 226

Query: 250 LAS 252
             +
Sbjct: 227 AVT 229

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  170 bits (434), Expect = 3e-50
 Identities = 71/276 (25%), Positives = 115/276 (41%), Gaps = 30/276 (10%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--QQV 58
           +  ++ST  +   + L G+VA++TG A GIG +   +F + GA V   DV       ++V
Sbjct: 196 VGAADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRV 255

Query: 59  CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREADL 117
              +GG         DVT ++ V        E  G  +DI+VNNAGI+       R+  L
Sbjct: 256 ADKVGGTA----LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT-------RDKLL 304

Query: 118 -----SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK 172
                  ++ V  +N+       +           G +I + S+AG  G  G   Y  +K
Sbjct: 305 ANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTK 364

Query: 173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN 232
             ++GL + +A  L   GI +N V+P  + T +    +P   R           V R  N
Sbjct: 365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMT-EAIPLATRE----------VGRRLN 413

Query: 233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGG 268
                    DVA  + + AS  +  ++G  + V G 
Sbjct: 414 SLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ 449

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  164 bits (416), Expect = 2e-49
 Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 20/258 (7%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAK----VCIADVQDNLGQQ 57
             S+ +    A +RL  +  LITG + GIG++T   + +        +  A   + L ++
Sbjct: 17  RGSHMSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL-EE 75

Query: 58  VCQSLGGEPDTFFCH---CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIRE 114
           + +++  E      H    D+T+ E +   ++   ++F  +DI+VNNAG +      + +
Sbjct: 76  LKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDR-VGQ 134

Query: 115 ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA 174
               + + VFD NV  + +  +    I   +  G I+++ S+AG         Y  SK A
Sbjct: 135 IATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFA 194

Query: 175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ 234
           V     ++  EL    IRV  ++P  V T  +L      E  E A   +++         
Sbjct: 195 VGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNE--EQAKNVYKDTTP------ 246

Query: 235 GTELTANDVANAVLFLAS 252
              L A+DVA+ +++  S
Sbjct: 247 ---LMADDVADLIVYATS 261

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  162 bits (412), Expect = 5e-49
 Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 15/250 (6%)

Query: 5   NSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLG 63
           + +         +     ITG  +G GE+  R F + G  + +    ++ L Q +   L 
Sbjct: 8   HHSSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERL-QALAGELS 66

Query: 64  GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV 123
            +        DV     + +AVD   E+F TL  ++NNAG++    P  +  DL +++ +
Sbjct: 67  AKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDP-AQSCDLDDWDTM 125

Query: 124 FDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV 182
            D N+KG+ +  +     +I    G +I+++ SVAG     G H Y G+K  V   + N+
Sbjct: 126 VDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNL 185

Query: 183 AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND 242
             +L   G+RV  + P    +  +L     ++        +              +   D
Sbjct: 186 RCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHP---------IQPED 234

Query: 243 VANAVLFLAS 252
           +A  + ++ +
Sbjct: 235 IAETIFWIMN 244

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  163 bits (414), Expect = 1e-48
 Identities = 82/292 (28%), Positives = 126/292 (43%), Gaps = 48/292 (16%)

Query: 5   NSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG--------- 55
             T    ++  + GRV ++TG   GIG +    F   GA+V + D+   L          
Sbjct: 14  AQTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSA 73

Query: 56  -QQVCQ---SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD 111
            Q V     + GGE        +V   +     +   VE FG LD++VNNAGI       
Sbjct: 74  AQSVVDEITAAGGE--AVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI------- 124

Query: 112 IREADL-----SEFEKVFDINVKGVFHGMKHAARIMIPQTK------GTIISICSVAGAI 160
           +R+  +      EF+ V  +++KG F  M+HAA      +K      G II+  S AG  
Sbjct: 125 VRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184

Query: 161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM 220
           G +G   Y+ +K  +  L    AAE+G+YG+ VN ++P A  T +      E   T+D  
Sbjct: 185 GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSA-RTRMTETVFAEMMATQDQD 243

Query: 221 VGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
                            +   +V+  V++L S EAR ++G    V+GG   V
Sbjct: 244 FDA--------------MAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRV 281

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  158 bits (403), Expect = 7e-48
 Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 19/236 (8%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           + L+TG   G GE   R F + G KV      Q+ L Q++   LG     +    DV   
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-QELKDELGDN--LYIAQLDVRNR 58

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
             +   +     ++  +DI+VNNAG++    P   +A + ++E + D N KG+ +  +  
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGMEP-AHKASVEDWETMIDTNNKGLVYMTRAV 117

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
              M+ +  G II+I S AG+    G + Y  +K  V   + N+  +L    +RV  + P
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

Query: 199 YAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-MQGTE-LTANDVANAVLFLAS 252
             V              TE + V F+    +     Q T  LT  DV+ AV ++++
Sbjct: 178 GLVGG------------TEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVST 221

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  157 bits (399), Expect = 3e-47
 Identities = 44/260 (16%), Positives = 90/260 (34%), Gaps = 22/260 (8%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHK---HGAKVCIADVQDNLGQQVCQSLGGEPDTFF 70
             L   V ++TG + G G +      +    G+ + ++   +++ +Q+ + LG +     
Sbjct: 2   DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK 61

Query: 71  CH---CDVTKEEDVCSAVDLTVEKFGT----LDIMVNNAGISG-APCPDIREADLSEFEK 122
                 D+  E  V   +    E          +++NNA   G      +   DL+E   
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 123 VFDINVKGVFHGMKHAARIMI--PQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNK 180
            + +N+  +              P    T+++I S+       G   Y   K A   L +
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 181

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
            +AAE  +  +RV   +P  +   +      E  +  +     +   +      G  +  
Sbjct: 182 VLAAE--EPSVRVLSYAPGPLDNDMQ-QLARETSKDPELRSKLQKLKS-----DGALVDC 233

Query: 241 NDVANAVLFLASDEARYISG 260
              A  +L L   +  + SG
Sbjct: 234 GTSAQKLLGLLQKDT-FQSG 252

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  162 bits (413), Expect = 2e-46
 Identities = 72/280 (25%), Positives = 113/280 (40%), Gaps = 51/280 (18%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG---------QQVCQ---SL 62
               +V +ITG   G+G+     F K GAKV + D+   L            V       
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-----DL 117
           GG       + +V    D    V+  V+ FGT+ +++NNAGI       +R+A       
Sbjct: 65  GGV--AVADYNNVL---DGDKIVETAVKNFGTVHVIINNAGI-------LRDASMKKMTE 112

Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
            +++ V D+++ G F   K A      Q  G I++  S AG  G  G   Y  +K A+LG
Sbjct: 113 KDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLG 172

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
             + +A E  KY I+ N ++P A  + +  + +P                         +
Sbjct: 173 FAETLAKEGAKYNIKANAIAPLA-RSRMTESIMPPPML--------------------EK 211

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR 277
           L    VA  VL+L+S E   ++G    V  GF +     R
Sbjct: 212 LGPEKVAPLVLYLSSAEN-ELTGQFFEVAAGFYAQIRWER 250

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  156 bits (396), Expect = 6e-44
 Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 37/273 (13%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
                +  S      L  +V LITG   G+G+   + F K+GAKV + D +D    +   
Sbjct: 305 RKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVD 362

Query: 61  ---SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPD--IREA 115
              + GGE   +    DV   +D  + +   ++K+GT+DI+VNNAGI      D    + 
Sbjct: 363 EIKAAGGE--AWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGI----LRDRSFAKM 414

Query: 116 DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV 175
              E++ V  +++ G F+  + A    + +  G II+I S +G  G  G   Y+ SK  +
Sbjct: 415 SKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGI 474

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG 235
           LGL+K +A E  K  I+VN V+P+A  T + L+ + E+++                    
Sbjct: 475 LGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQDK-------------------- 513

Query: 236 TELTANDVANAVLFLASDEARYISGTNLMVDGG 268
               A+ VA  +++L +D+   ++G    + GG
Sbjct: 514 NLYHADQVAPLLVYLGTDDV-PVTGETFEIGGG 545

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  152 bits (387), Expect = 8e-45
 Identities = 64/275 (23%), Positives = 106/275 (38%), Gaps = 51/275 (18%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG---------QQVCQ---SL 62
           R  GRV L+TG   G+G +    F + GA V + D+  +            +V +     
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 63  GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-----DL 117
           GG+      +  V   E     V   ++ FG +D++VNNAGI       +R+        
Sbjct: 66  GGK--AVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGI-------LRDRSFSRISD 113

Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG 177
            +++ +  ++++G F   + A   M  Q  G II   S +G  G  G   Y+ +K  +LG
Sbjct: 114 EDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLG 173

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE 237
           L   +  E  K  I  N ++P A  + +    +PE+                        
Sbjct: 174 LANTLVIEGRKNNIHCNTIAPNA-GSRMTETVMPEDLV--------------------EA 212

Query: 238 LTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
           L    VA  VL+L  +     +G    V  G+   
Sbjct: 213 LKPEYVAPLVLWLCHESC-EENGGLFEVGAGWIGK 246

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  148 bits (375), Expect = 6e-44
 Identities = 42/251 (16%), Positives = 90/251 (35%), Gaps = 30/251 (11%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           + +ITG ++G+G    +L+   G    +    +  L   V   L       +   D+   
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-STVTNCLSNN--VGYRARDLASH 59

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHA 138
           ++V    +   +       +V++AG        ++E D  + + + + N+    + ++  
Sbjct: 60  QEVEQLFE---QLDSIPSTVVHSAGS--GYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 139 ARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSP 198
            +    Q    ++ I S A          Y   K AV GL ++V  EL    +++  V P
Sbjct: 115 VKRYKDQ-PVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP 173

Query: 199 YAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR-Y 257
             +AT          E +  ++                 ++A D A  +    ++    Y
Sbjct: 174 GGMATEFW-------ETSGKSLDTSS------------FMSAEDAALMIHGALANIGNGY 214

Query: 258 ISGTNLMVDGG 268
           +S   +  +G 
Sbjct: 215 VSDITVNREGH 225

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  146 bits (369), Expect = 4e-40
 Identities = 73/293 (24%), Positives = 115/293 (39%), Gaps = 51/293 (17%)

Query: 2   SNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---------QD 52
            + +   SS    R  GRVA++TG   G+G     LF + GAKV + D+           
Sbjct: 3   HHHHHMSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQ 62

Query: 53  NLGQQVCQ---SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPC 109
                V       GGE      +  V     V   ++  ++ FG +DI+VNNAGI     
Sbjct: 63  RAADIVVDEIRKAGGE--AVADYNSVIDGAKV---IETAIKAFGRVDILVNNAGI----- 112

Query: 110 PDIREA-----DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG 164
             +R+         ++  V D+++KG F   + A   M  Q  G II   S +G  G  G
Sbjct: 113 --LRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG 170

Query: 165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR 224
              YT +K  ++GL   VA E  +  +  N + P A A+ +    LP+            
Sbjct: 171 QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTA-ASRMTEGILPDILF--------- 220

Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR 277
                       EL    +A  V +L  +     +G+ +    G+ +  H +R
Sbjct: 221 -----------NELKPKLIAPVVAYLCHESCE-DNGSYIESAAGWATKLHMVR 261

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  136 bits (343), Expect = 3e-38
 Identities = 57/259 (22%), Positives = 99/259 (38%), Gaps = 28/259 (10%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKV-----CIADVQDNLGQQVCQSLGGEPDTFFC- 71
            ++ LITG ++G G  T       G +V      I     +  + +              
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTL 64

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVK 129
             DV  +  V  A+D  + + G +D++++NAG    G            +F +++DINV 
Sbjct: 65  ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGP----AEAFTPEQFAELYDINVL 120

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIG---GLGPHAYTGSKHAVLGLNKNVAAEL 186
                 + A   M  Q  G +I I S + A G    L P  Y  +K A+  +    A EL
Sbjct: 121 STQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP--YFAAKAAMDAIAVQYAREL 178

Query: 187 GKYGIRVNCVSPYAVATGLA----------LAHLPEEERTEDAMVGFRNFVARNANMQGT 236
            ++GI  + + P A  +G             A   E E   +A +G        A +   
Sbjct: 179 SRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLG-EEIKKAFAAIVPP 237

Query: 237 ELTANDVANAVLFLASDEA 255
           +   + VA+A++ +    +
Sbjct: 238 DADVSLVADAIVRVVGTAS 256

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  130 bits (330), Expect = 1e-37
 Identities = 26/190 (13%), Positives = 59/190 (31%), Gaps = 28/190 (14%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
               L+ G +  +G +      K    +       ++                   D+T 
Sbjct: 3   AMKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDV-----------------TVDITN 45

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISG-APCPDIREADLSEFEKVFDINVKGVFHGMK 136
            + +        E+ G +D +V+  G +  +P  ++               + G  + + 
Sbjct: 46  IDSI----KKMYEQVGKVDAIVSATGSATFSPLTELTPEK---NAVTISSKLGGQINLVL 98

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
                +  +  G+      +      +   +   +  AV    K+ A E+ + GIR+N V
Sbjct: 99  LGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTV 155

Query: 197 SPYAVATGLA 206
           SP  +     
Sbjct: 156 SPNVLEESWD 165

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  129 bits (326), Expect = 6e-37
 Identities = 45/236 (19%), Positives = 79/236 (33%), Gaps = 37/236 (15%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
            LITG   G+G +  R     G  + ++  +     ++ + +G          D+  E  
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARALP----ADLADEL- 55

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
                   +E+ G LD++V+  G +G     +REA     E++   ++      +KH   
Sbjct: 56  ---EAKALLEEAGPLDLLVHAVGKAGRA--SVREAGRDLVEEMLAAHLLTAAFVLKH--- 107

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
               Q     +   +    +   G  AY  +K A+    +    EL + G+ +  V   A
Sbjct: 108 -ARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166

Query: 201 VATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
           VATG                       A         L+  + A  VL     E  
Sbjct: 167 VATG---------------------LWAPLGGPPKGALSPEEAARKVLEGLFREPV 201

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  131 bits (331), Expect = 7e-37
 Identities = 56/251 (22%), Positives = 95/251 (37%), Gaps = 15/251 (5%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC-HCDVTK 77
           +V L+TG ++G G +        G  V I   +    + +   +   PD       DVT 
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTV-IGTARR--TEALDDLVAAYPDRAEAISLDVTD 62

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAG--ISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            E +       + ++G +D++VNNAG    GA      E    E   +F+++V G     
Sbjct: 63  GERIDVVAADVLARYGRVDVLVNNAGRTQVGA----FEETTERELRDLFELHVFGPARLT 118

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           +     M  +  G++++I S  G +   G  AY+ +K A+  L++ +A E+  +GI+V  
Sbjct: 119 RALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLI 178

Query: 196 VSPYAVATG-LALAHLPEEERTEDAMVGFRNFVARNANMQGTELT-ANDVANAVLFLASD 253
           V P A  T           E                    G++       A A+      
Sbjct: 179 VEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDT 238

Query: 254 E---ARYISGT 261
           E    R   G 
Sbjct: 239 EKTPLRLALGG 249

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  125 bits (317), Expect = 2e-34
 Identities = 53/260 (20%), Positives = 87/260 (33%), Gaps = 22/260 (8%)

Query: 19  RVALITGGATGIGESTVRLFHK---HGAKVCIA-----DVQDNLGQQVCQSLGGEPDTFF 70
            V LITG ++GIG               KV  A       Q  L +              
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKV-YATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DV   + V +A +   E  G +D++V NAG+ G   P +          V D+NV G
Sbjct: 62  LQLDVRDSKSVAAARERVTE--GRVDVLVCNAGL-GLLGP-LEALGEDAVASVLDVNVVG 117

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
               ++     M  +  G ++   SV G +G      Y  SK A+ GL +++A  L  +G
Sbjct: 118 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFG 177

Query: 191 IRVNCVSPYAVATGLA------LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           + ++ +    V T            + +          ++         +       +VA
Sbjct: 178 VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA 237

Query: 245 NAVLFLASDE---ARYISGT 261
              L          RY +  
Sbjct: 238 EVFLTALRAPKPTLRYFTTE 257

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  105 bits (264), Expect = 6e-27
 Identities = 58/321 (18%), Positives = 91/321 (28%), Gaps = 102/321 (31%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP--DTFFCH 72
               R A++TGG  GIG    +    +G  V +       G +  + L      +  F  
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 73  CDVTKEED-VCSAVDLTVEKFGTLDIMVNNAGISGAPCP--------------------- 110
            DVT     + S  D     FG LDI+VNNAG++G                         
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 111 -------DIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL 163
                  ++        E+   IN  GV    +    ++       I+++ S  G++  +
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188

Query: 164 GPH-------------------------------------------AYTGSKHAVLGLNK 180
                                                         AYT SK  +    +
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA 240
            +A ++     +VNCV P  V T                M                  TA
Sbjct: 249 VLANKIP--KFQVNCVCPGLVKTE---------------MNYGIGN-----------YTA 280

Query: 241 NDVANAVLFLASDEARYISGT 261
            + A  V+ +A       SG 
Sbjct: 281 EEGAEHVVRIALFPDDGPSGF 301

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 99.3 bits (248), Expect = 4e-25
 Identities = 41/206 (19%), Positives = 72/206 (34%), Gaps = 23/206 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
              ++TG   GIG   V+   K       IA  +D       +S+            VT 
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVL-PLTVTC 62

Query: 78  EEDVCSAVDLTVEKFG--TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF--- 132
           ++ + + V    E  G   L +++NNAG+         E + +   +  D+N   V    
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNAGVLL-SYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 133 --------HGMKHAARIMIPQTKGTIISICSVAGAIG-------GLGPHAYTGSKHAVLG 177
                   +     +   +  ++  +I+I S  G+I             AY  SK A+  
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 178 LNKNVAAELGKYGIRVNCVSPYAVAT 203
             + +A +L    + V    P  V T
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQT 207

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 98.2 bits (245), Expect = 2e-24
 Identities = 53/238 (22%), Positives = 81/238 (34%), Gaps = 55/238 (23%)

Query: 18  GRVALITGGATGIGESTVR-LFHKHGAKVCIA--DVQDNLGQQVCQSLGGE-PDTFFCHC 73
             VAL+TGG  GIG + VR L       V +   DV    GQ   Q L  E     F   
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT--RGQAAVQQLQAEGLSPRFHQL 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+   + + +  D   +++G LD++VNNAGI+             + E     N  G   
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAF--KVADPTPFHIQAEVTMKTNFFGTRD 119

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIG-------------------------------- 161
                  ++ PQ  G ++++ S+                                     
Sbjct: 120 VCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177

Query: 162 ---------GLGPHAYTGSKHAVLGLNKNVAAELGKY----GIRVNCVSPYAVATGLA 206
                    G    AY  +K  V  L++  A +L +      I +N   P  V T +A
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 235

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 96.7 bits (241), Expect = 5e-24
 Identities = 42/222 (18%), Positives = 69/222 (31%), Gaps = 21/222 (9%)

Query: 2   SNSNSTDSSPAVQRLVG-RVALITGGATGIGESTVRLFHKHGAKVC--IADVQDNLGQQV 58
           S+ +   SS  V R       LITG   G+G   V+                ++    + 
Sbjct: 4   SHHHHHHSSGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE 63

Query: 59  CQSLGGEPDTFFCH-CDVTKEEDVCSAVDLTVEKFGT--LDIMVNNAGISGAPCPDIREA 115
            + L            D+   +     V           L+++ NNAGI+      I   
Sbjct: 64  LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS-ARITAV 122

Query: 116 DLSEFEKVFDINVKGVF-----------HGMKHAARIMIPQTKGTIISICSVAGAIG--- 161
              E       N                   K      +   +  II++ S+ G+I    
Sbjct: 123 RSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT 182

Query: 162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT 203
             G +AY  SK A+    K+++ +L    I    + P  V T
Sbjct: 183 DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKT 224

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 89.2 bits (222), Expect = 4e-21
 Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 64/283 (22%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L G+ ALITG A       GI +S    FH+ GA++        L ++V    +  G + 
Sbjct: 19  LEGKRALITGVANERSIAYGIAKS----FHREGAQLAFTYATPKLEKRVREIAKGFGSD- 73

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READLSE--FEK 122
                 CDV+ +ED+ +      E +G+LDI+V+   I+ AP  +      D S   F+ 
Sbjct: 74  --LVVKCDVSLDEDIKNLKKFLEENWGSLDIIVH--SIAYAPKEEFKGGVIDTSREGFKI 129

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLG 177
             DI+V      +      ++    G I+++             +Y G++       V+G
Sbjct: 130 AMDISVYS-LIALTRELLPLMEGRNGAIVTL-------------SYYGAEKVVPHYNVMG 175

Query: 178 LNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NF 226
           + K      V   A ++ K+G R+N +S   V T LA   +           GF      
Sbjct: 176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKT-LAAYSIT----------GFHLLMEH 224

Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
             +        +T  DV +  +FL SD AR I+G  + VD G+
Sbjct: 225 TTKVNPFGKP-ITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 89.2 bits (222), Expect = 5e-21
 Identities = 57/281 (20%), Positives = 109/281 (38%), Gaps = 59/281 (20%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L  +  +I G A       G+ +       + GAK+     ++   +++    + L   P
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKV----LDQLGAKLVFTYRKERSRKELEKLLEQLNQ-P 84

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVF 124
           +      DV  +E+V +  +   +  G +D + ++   +       R ++ S   F    
Sbjct: 85  EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQ 144

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLN 179
           DI+       + H A+ ++P+  G+I++               Y G + A     V+G+ 
Sbjct: 145 DISSYS-LTIVAHEAKKLMPE-GGSIVAT-------------TYLGGEFAVQNYNVMGVA 189

Query: 180 K-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVA 228
           K     NV   A +LG   IRVN +S   + T L+   +           GF      + 
Sbjct: 190 KASLEANVKYLALDLGPDNIRVNAISAGPIRT-LSAKGVG----------GFNTILKEIE 238

Query: 229 RNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
             A ++   +   +V     +L SD +  ++G N+ VD GF
Sbjct: 239 ERAPLKRN-VDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 278

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 88.0 bits (219), Expect = 7e-21
 Identities = 61/278 (21%), Positives = 107/278 (38%), Gaps = 55/278 (19%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
           L G+ AL+ G          I         + GA+V ++   + L  +  +         
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAK----LKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDIN 127
               DVT++E++ +      E FG LD +V+    +     + R  D     +    +++
Sbjct: 62  LFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVS 121

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLNK-- 180
                  +   A  ++ +  G I+++              Y  S+       V+ + K  
Sbjct: 122 AYS-LVAVARRAEPLLRE-GGGIVTL-------------TYYASEKVVPKYNVMAIAKAA 166

Query: 181 ---NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNA 231
              +V   A ELG  G+RVN +S   V T +A   +P          GF    + VA+ A
Sbjct: 167 LEASVRYLAYELGPKGVRVNAISAGPVRT-VAARSIP----------GFTKMYDRVAQTA 215

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            ++   +T  +V N  LFL S  A  I+G  + VD G+
Sbjct: 216 PLRRN-ITQEEVGNLGLFLLSPLASGITGEVVYVDAGY 252

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 59/280 (21%), Positives = 97/280 (34%), Gaps = 46/280 (16%)

Query: 16  LVGRVALITGGATG--IGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFCH 72
           L G+  L++G  T   I     R+  + GA++ +       L Q++   L  +       
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLL--E 62

Query: 73  CDVTKEEDVCSAVDLTVEKFGT---LDIMVNNAGISGAPCPDIREADLSE-----FEKVF 124
            DV  EE + S      E  G    LD +V+   I   P   +      +       K  
Sbjct: 63  LDVQNEEHLASLAGRVTEAIGAGNKLDGVVH--SIGFMPQTGMGINPFFDAPYADVSKGI 120

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA----VLGLNK 180
            I+    +  M  A   ++              G+I G+    +  S+       + + K
Sbjct: 121 HISAYS-YASMAKALLPIMNP-----------GGSIVGM---DFDPSRAMPAYNWMTVAK 165

Query: 181 -----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVAR 229
                     A E GKYG+R N V+   + T LA++ +      E+A    +       +
Sbjct: 166 SALESVNRFVAREAGKYGVRSNLVAAGPIRT-LAMSAIVGGALGEEAGAQIQLLEEGWDQ 224

Query: 230 NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            A +      A  VA  V  L SD     +G  +  DGG 
Sbjct: 225 RAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 87.3 bits (217), Expect = 2e-20
 Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 68/285 (23%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
           L G+  LITG  +      GI ++     H+ GA++           +V +         
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKA----MHREGAELAFT-YVGQFKDRVEKLCAEFNPAA 78

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI---------READLSEF 120
              CDV  ++++        + +  LD +V+   I+ AP   +         RE     F
Sbjct: 79  VLPCDVISDQEIKDLFVELGKVWDGLDAIVH--SIAFAPRDQLEGNFIDCVTREG----F 132

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----V 175
               DI+    F  +    R M+     +++++              Y G++ A      
Sbjct: 133 SIAHDISAYS-FAALAKEGRSMMKNRNASMVAL-------------TYIGAEKAMPSYNT 178

Query: 176 LGLNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR--- 224
           +G+ K      V   A  LG+ GI+VN VS   + T LA + +            F+   
Sbjct: 179 MGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKT-LAASGIS----------NFKKML 227

Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
           ++ A  + ++   +   +V N V FL SD A  I+G  + VD G+
Sbjct: 228 DYNAMVSPLKKN-VDIMEVGNTVAFLCSDMATGITGEVVHVDAGY 271

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 86.1 bits (214), Expect = 5e-20
 Identities = 64/281 (22%), Positives = 109/281 (38%), Gaps = 59/281 (20%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L GR  ++ G       A GI  S     H+ GA++      + L + V     +L    
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARS----LHEAGARLIFTYAGERLEKSVHELAGTLDRND 60

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVF 124
            +    CDVT + ++ +      E+ G +  + +    +          + +   F    
Sbjct: 61  -SIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAH 119

Query: 125 DINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLN 179
           +I+       +  AAR M+ +  G+I+++              Y G +       V+G+ 
Sbjct: 120 NISSYS-LTAVVKAARPMMTE-GGSIVTL-------------TYLGGELVMPNYNVMGVA 164

Query: 180 K-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVA 228
           K     +V   AA+LGK  IRVN +S   + T L+   +            F      + 
Sbjct: 165 KASLDASVKYLAADLGKENIRVNSISAGPIRT-LSAKGIS----------DFNSILKDIE 213

Query: 229 RNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
             A ++ T  T  +V +   FL SD +R I+G NL VD GF
Sbjct: 214 ERAPLRRT-TTPEEVGDTAAFLFSDMSRGITGENLHVDSGF 253

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 85.3 bits (212), Expect = 1e-19
 Identities = 61/278 (21%), Positives = 111/278 (39%), Gaps = 55/278 (19%)

Query: 16  LVGRVALITGGAT------GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF 69
           L G+  LI G A       GI +S        GA +    + ++L ++V          +
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQS----CFNQGATLAFTYLNESLEKRVRPIAQELNSPY 59

Query: 70  FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE--FEKVFDIN 127
               DV+KEE   S  +   +  G+LD +V++   +     +    + S+  F    +I+
Sbjct: 60  VYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEIS 119

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGLNK-- 180
           V      + +  + ++     +++++              Y GS        V+GL K  
Sbjct: 120 VYS-LIELTNTLKPLLNN-GASVLTLS-------------YLGSTKYMAHYNVMGLAKAA 164

Query: 181 ---NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFVARNA 231
               V   A +LGK+ IRVN +S   + T LA + +            FR    +   NA
Sbjct: 165 LESAVRYLAVDLGKHHIRVNALSAGPIRT-LASSGIA----------DFRMILKWNEINA 213

Query: 232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            ++   ++  +V NA ++L S  +  +SG    VD G+
Sbjct: 214 PLRKN-VSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 250

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 85.4 bits (212), Expect = 1e-19
 Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 65/283 (22%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L G+  LI G       A GI ++      + GA++      D L ++V    + LG   
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKA----AREAGAELAFTYQGDALKKRVEPLAEELGAF- 83

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READLSE--FEK 122
                HCDV     + +  +   +K+G LD +V+   I  +   ++  R  D SE  F  
Sbjct: 84  --VAGHCDVADAASIDAVFETLEKKWGKLDFLVH--AIGFSDKDELTGRYIDTSEANFTN 139

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLG 177
              I+V      +   A  ++    G+I+++              Y G++       V+G
Sbjct: 140 TMLISVYS-LTAVSRRAEKLMAD-GGSILTLT-------------YYGAEKVMPNYNVMG 184

Query: 178 LNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NF 226
           + K     +V   A +LG   IRVN +S   + T LA + +            FR    +
Sbjct: 185 VAKAALEASVKYLAVDLGPQNIRVNAISAGPIKT-LAASGIG----------DFRYILKW 233

Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
              NA ++ T +T ++V +  L+  SD +R ++G     D G+
Sbjct: 234 NEYNAPLRRT-VTIDEVGDVGLYFLSDLSRSVTGEVHHADSGY 275

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 85.0 bits (211), Expect = 2e-19
 Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 65/283 (22%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           + G+  +I G       A GI ++        GA+V +  + +   ++V    +SLG + 
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKA----VCAQGAEVALTYLSETFKKRVDPLAESLGVK- 82

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI--READLSE--FEK 122
                 CDV+  E V +   +  E++G+LD +V+   ++ +   ++  R  D S   F  
Sbjct: 83  --LTVPCDVSDAESVDNMFKVLAEEWGSLDFVVH--AVAFSDKNELKGRYVDTSLGNFLT 138

Query: 123 VFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLG 177
              I+    F  +   A  ++    G+I+++              Y G++       V+G
Sbjct: 139 SMHISCYS-FTYIASKAEPLMTN-GGSILTLS-------------YYGAEKVVPHYNVMG 183

Query: 178 LNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NF 226
           + K     +V   A +LGK  IRVN +S   V T LA + +            F     +
Sbjct: 184 VCKAALEASVKYLAVDLGKQQIRVNAISAGPVRT-LASSGIS----------DFHYILTW 232

Query: 227 VARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
              N+ ++    T +DV  A L+L SD  R  +G  + VD G+
Sbjct: 233 NKYNSPLRRN-TTLDDVGGAALYLLSDLGRGTTGETVHVDCGY 274

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 68/288 (23%), Positives = 109/288 (37%), Gaps = 74/288 (25%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L G+  L+TG       A GI ++      + GA++    V D    ++       G E 
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKA----CKREGAELAFTYVGDRFKDRITEFAAEFGSE- 66

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDI---------READL 117
                 CDV  +  + +        + +LD +V+   I  AP   I         RE   
Sbjct: 67  --LVFPCDVADDAQIDALFASLKTHWDSLDGLVH--SIGFAPREAIAGDFLDGLTREN-- 120

Query: 118 SEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA--- 174
             F    DI+    F  +  AA  M+     +++++              Y G++ A   
Sbjct: 121 --FRIAHDISAYS-FPALAKAALPMLSD-DASLLTLS-------------YLGAERAIPN 163

Query: 175 --VLGLNK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR 224
              +GL K     +V   A  LG  G+RVN +S   + T LA + +            F 
Sbjct: 164 YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKT-LAASGIK----------SFG 212

Query: 225 ---NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
              +FV  N+ ++   +T   V NA  FL SD A  ++   + VD GF
Sbjct: 213 KILDFVESNSPLKRN-VTIEQVGNAGAFLLSDLASGVTAEVMHVDSGF 259

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 69/282 (24%), Positives = 110/282 (39%), Gaps = 62/282 (21%)

Query: 16  LVGRVALITGG------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGEP 66
           L G+  L+TG       A GI ++     H+ GA++      D L  +V      LG + 
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQA----MHREGAELAFTYQNDKLKGRVEEFAAQLGSD- 61

Query: 67  DTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSE---FEKV 123
                 CDV ++  + +      + +   D  V++ G +     D    +      F+  
Sbjct: 62  --IVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIA 119

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA-----VLGL 178
            DI+    F  M  A R M+      ++++              Y G++ A     V+GL
Sbjct: 120 HDISSYS-FVAMAKACRSMLNP-GSALLTLS-------------YLGAERAIPNYNVMGL 164

Query: 179 NK-----NV---AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR---NFV 227
            K     NV   A  +G  G+RVN +S   + T LA + +            FR      
Sbjct: 165 AKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIK----------DFRKMLAHC 213

Query: 228 ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
                ++ T +T  DV N+  FL SD +  ISG  + VDGGF
Sbjct: 214 EAVTPIRRT-VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 254

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 57/279 (20%), Positives = 95/279 (34%), Gaps = 60/279 (21%)

Query: 1   MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ 60
           M+   + D    +     R  +ITG  +G+G  T R   + GA V +A      G+   +
Sbjct: 3   MTGWTAAD----LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR 58

Query: 61  SLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEF 120
           ++ G+ +      D+     V        +     D+++NNAGI     P     D   F
Sbjct: 59  TMAGQVE--VRELDLQDLSSVRRF----ADGVSGADVLINNAGI--MAVPYALTVD--GF 108

Query: 121 EKVFDINVKGVFHGMKHAA--RIMIPQTKGTIISICSVAGAIGGLGPH------------ 166
           E     N  G      H A   +++P+    ++++ S+A   G +               
Sbjct: 109 ESQIGTNHLG------HFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPW 162

Query: 167 -AYTGSKHAVLGLNKNV--AAELGK------YGIRVNCVSPYAVATGLALAHLPEEERTE 217
            AY+ SK A      N+   +EL +        +R     P    T L       +    
Sbjct: 163 LAYSQSKLA------NLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQ-GASGRKLGDA 215

Query: 218 DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
                 R  VA +A   G        A   L+ AS +  
Sbjct: 216 LMSAATR-VVATDA-DFG--------ARQTLYAASQDLP 244

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 58/308 (18%), Positives = 102/308 (33%), Gaps = 76/308 (24%)

Query: 16  LVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD------ 67
           L G+ A + G A   G G +  +     GA+V +      LG        G  D      
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 68  -------------------TFFCHCDVTKEEDVCSAVDLTV--------EKFGTLDIMVN 100
                                    D+   +        T+        +  G +DI+V+
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126

Query: 101 NAGISGAPCPDIREADLSE--FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG 158
              ++  P       + S   +      +       ++H   IM     G+ +++     
Sbjct: 127 --SLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEG--GSAVTL----- 177

Query: 159 AIGGLGPHAYTGSKHA------VLGLNK-----NV---AAELG-KYGIRVNCVSPYAVAT 203
                   +Y  ++         +   K     +    A E G KYG+RVN +S   + +
Sbjct: 178 --------SYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS 229

Query: 204 GLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGT 261
             A + + +       D  +   ++   NA ++   L ++DV  A LFL S  AR +SG 
Sbjct: 230 -RAASAIGKSGEKSFIDYAI---DYSYNNAPLRRD-LHSDDVGGAALFLLSPLARAVSGV 284

Query: 262 NLMVDGGF 269
            L VD G 
Sbjct: 285 TLYVDNGL 292

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 66/311 (21%), Positives = 100/311 (32%), Gaps = 88/311 (28%)

Query: 16  LVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD------ 67
           L G+ A I G A   G G +  +     GA++ +      L         G+ D      
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 68  -------------------TFFCHCDV--------TKEEDVCSAVDLTVEKFGTLDIMVN 100
                                    DV        +    V  A +   + FG++DI+V+
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 101 NAGISGAPCPDIR----EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV 156
               S A  P++     E     +      +       + H   IM P   G  IS+   
Sbjct: 126 ----SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG--GASISL--- 176

Query: 157 AGAIGGLGPHAYTGSKHAVLGLN--------------KNVAAELG-KYGIRVNCVSPYAV 201
                      Y  S+  + G                + +A E G K  IRVN +S   +
Sbjct: 177 ----------TYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL 226

Query: 202 ATGLALAHLPEEERTEDAMVGFR---NFVARNANMQGTELTANDVANAVLFLASDEARYI 258
            +  A            A+        +   NA +Q T LTA++V NA  FL S  A  I
Sbjct: 227 GS-RAAK----------AIGFIDTMIEYSYNNAPIQKT-LTADEVGNAAAFLVSPLASAI 274

Query: 259 SGTNLMVDGGF 269
           +G  + VD G 
Sbjct: 275 TGATIYVDNGL 285

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 66.0 bits (161), Expect = 1e-12
 Identities = 44/230 (19%), Positives = 83/230 (36%), Gaps = 53/230 (23%)

Query: 69  FFCHCDVTKEEDVCSAVDLTV--------EKFGTLDIMVNNAGISGAPCPDI--READLS 118
                +V+  +        T+           G +DI+V+    S A  P++       S
Sbjct: 100 QDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVH----SLANGPEVTKPLLQTS 155

Query: 119 E--FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL 176
              +      +       ++H   +M     G+ +++             +Y  S+  + 
Sbjct: 156 RKGYLAAVSSSSYSFVSLLQHFLPLMKE--GGSALAL-------------SYIASEKVIP 200

Query: 177 GLN--------------KNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEERTE--DA 219
           G                + +A E G+   +RVNC+S   + +  A + + +       D 
Sbjct: 201 GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS-RAASAIGKAGDKTFIDL 259

Query: 220 MVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            +   ++   NA +Q   L ++DV  A LFL S  AR ++G  L VD G 
Sbjct: 260 AI---DYSEANAPLQKE-LESDDVGRAALFLLSPLARAVTGATLYVDNGL 305

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 63.0 bits (153), Expect = 1e-11
 Identities = 22/164 (13%), Positives = 47/164 (28%), Gaps = 15/164 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           + G+ A++  G   +G  +  L    GA+V +   + +  Q    S+           + 
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
             +     AV            +             +     + ++    I +   ++  
Sbjct: 177 ADDASRAEAV-------KGAHFVFTAGA------IGLELLPQAAWQNESSIEIVADYNAQ 223

Query: 136 KHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGL 178
                  I  T KG         GA+ G+G       +  +  L
Sbjct: 224 PPLGIGGIDATDKGKEYGGKRAFGAL-GIGGLKLKLHRACIAKL 266

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 58.0 bits (140), Expect = 5e-10
 Identities = 47/345 (13%), Positives = 92/345 (26%), Gaps = 117/345 (33%)

Query: 18  GRVALITGGA------TGIGESTVRLFHKHGAKVCIADVQDNLGQQV------------- 58
             +  I G         GI +       K   K+            +             
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKE----LSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMI 57

Query: 59  --------------------CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM 98
                                 +   E        ++ +   +    +L  +K+G ++++
Sbjct: 58  IDKDKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINML 117

Query: 99  VNNAGISGAPCPDI--READLSE--FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC 154
           V+    S A   ++     + S   +      +   +    K+   IM PQ   +IIS+ 
Sbjct: 118 VH----SLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQ--SSIISLT 171

Query: 155 SVAGAIGGLGPHAYTGSKHA------VLGLNK-----NV---AAELG-KYGIRVNCVSPY 199
                        Y  S+         +   K     +    A  LG  Y IR+N +S  
Sbjct: 172 -------------YHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAG 218

Query: 200 AVAT-----------------------------------GLALAHLPEEERTEDAMVGFR 224
            + +                                   G          +    +    
Sbjct: 219 PLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAI 278

Query: 225 NFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF 269
            +  + A ++   L + D+ +   FL S E+R I+G  + VD G 
Sbjct: 279 EYSEKYAPLRQK-LLSTDIGSVASFLLSRESRAITGQTIYVDNGL 322

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 41/304 (13%), Positives = 78/304 (25%), Gaps = 67/304 (22%)

Query: 18  GRVALITGGATGIGEST-VRLFHKHGAKVCI---------------ADVQDNLGQQVCQS 61
            +  L+ G ++G G ++ +      GA                            +  ++
Sbjct: 61  PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA 120

Query: 62  LGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-TLDIMVNNAGISGAPCPDIREADLSEF 120
            G    +   + D   +      ++L   + G  +D++V +        P   E   S  
Sbjct: 121 AGLYSKSI--NGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSAL 178

Query: 121 EKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---------------LGP 165
           + +                 I       +   I      +GG               L  
Sbjct: 179 KPIGQ-TYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLAD 237

Query: 166 HA------YTGSK-------HAVLGLNK--------NVAAELGKYGIRVNCVSPYAVATG 204
            A      Y G++       H  LG  K         + A L K+G   N     +V T 
Sbjct: 238 GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVT- 296

Query: 205 LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLM 264
            A A +P              +++    +   +         +  L  +      G    
Sbjct: 297 QASAAIP----------VMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAE 346

Query: 265 VDGG 268
           VD  
Sbjct: 347 VDEQ 350

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.94
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.93
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.93
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.93
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.92
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.92
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.92
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.91
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.91
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.91
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.91
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.91
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.91
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.91
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.91
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.91
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.9
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.9
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.9
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.9
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.9
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.9
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.9
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.9
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.9
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.9
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.89
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.89
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.89
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.88
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.88
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.88
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.88
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.88
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.88
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.88
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.87
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.87
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.87
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.86
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.86
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.85
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.84
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.84
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.84
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.84
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.84
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.83
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.83
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.83
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.82
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.81
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.81
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.8
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.79
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.77
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.77
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.74
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.74
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.73
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.7
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.69
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.66
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.66
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.65
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.63
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.61
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.6
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.45
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.41
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.13
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.13
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.94
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.93
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.72
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.7
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.68
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.68
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.65
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.63
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.59
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.58
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.53
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.52
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.5
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.41
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.4
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.39
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.38
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.38
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.36
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.34
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.3
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.3
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.29
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.28
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.28
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.22
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.21
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.15
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.13
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.09
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.08
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.08
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.06
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.05
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.05
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.02
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.01
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.97
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.96
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.95
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.95
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.93
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.92
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.9
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.87
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.86
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.85
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.82
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.82
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.79
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.78
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.72
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.7
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.69
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.69
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.68
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.63
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.62
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.61
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.6
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.6
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.57
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.54
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.54
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.53
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.51
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.49
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.47
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.46
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.44
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.43
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.43
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.42
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.42
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.41
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.4
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.27
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.27
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.25
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.17
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.16
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.15
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.14
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.13
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.11
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.1
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.07
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.05
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.05
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.05
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.03
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.98
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.98
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.96
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.95
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.94
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.93
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.93
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.93
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.87
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.86
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.84
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.83
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.82
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.81
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.81
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.81
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.72
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.72
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.69
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.67
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.65
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.61
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.54
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.53
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.51
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.5
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.49
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.48
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.48
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.48
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.45
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.44
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.39
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.38
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.37
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.36
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.33
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.28
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.27
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.25
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.22
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.2
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.2
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.19
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.18
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.09
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.09
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.08
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.08
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.05
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.05
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.05
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.03
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.03
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.97
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.97
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.97
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.97
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.95
1lnq_A	336	MTHK channels, potassium channel related protein;	95.95
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.94
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.93
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.91
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.9
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.87
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.87
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.87
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.85
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.83
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.82
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.81
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.8
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.79
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.78
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.77
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.76
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.76
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.72
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.7
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.67
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.65
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.62
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.61
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.6
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.6
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.56
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.45
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.44
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.42
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	95.4

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=5.3e-60  Score=396.69  Aligned_cols=250  Identities=32%  Similarity=0.528  Sum_probs=226.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.+++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            379999999999999999999999999999999999999999988888754 3678999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |++|++|||||+.... .++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|++||
T Consensus        83 G~iDiLVNNAGi~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK  161 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGV-TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK  161 (254)
T ss_dssp             SCCCEEEECCCCCCTT-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred             CCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence            9999999999986532 679999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|+.+|+|++|.||+++|||||+|+||+++|++........+..      ...+ .+..++.+|+.+|+|+|++++||+|
T Consensus       162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~------~~~~-~~~~~~~~R~g~pediA~~v~fLaS  234 (254)
T 4fn4_A          162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELG------MRTL-TKLMSLSSRLAEPEDIANVIVFLAS  234 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHH------HHHH-HHHHTTCCCCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHH------HHHH-HhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999976654432211      1222 2333456999999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +.++|+||++|.+|||+++
T Consensus       235 d~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          235 DEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCCcCCEEEeCCCccc
Confidence            9999999999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=3.8e-59  Score=391.74  Aligned_cols=249  Identities=28%  Similarity=0.403  Sum_probs=225.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999988888777754 357889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|++|++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|+|.++ +.|+||++||..+..+.++...|++
T Consensus        84 ~G~iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (255)
T 4g81_D           84 GIHVDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTA  161 (255)
T ss_dssp             TCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             CCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHH
Confidence            9999999999999866  899999999999999999999999999999999754 5699999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|+.+|+|++|.||+++|||||+|+||+++|++.......+.        ...+..... |.+|+.+|+|+|++++||
T Consensus       162 sKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~--------~~~~~~~~~-Pl~R~g~pediA~~v~fL  232 (255)
T 4g81_D          162 AKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQ--------FDSWVKSST-PSQRWGRPEELIGTAIFL  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHH--------HHHHHHHHS-TTCSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHH--------HHHHHHhCC-CCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999765433221        223333333 459999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+.++|+||++|.+|||++-+
T Consensus       233 ~S~~a~~iTG~~i~VDGG~~Av  254 (255)
T 4g81_D          233 SSKASDYINGQIIYVDGGWLAV  254 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCchhCCCcCCEEEECCCeEee
Confidence            9999999999999999998753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=8.3e-58  Score=386.95  Aligned_cols=251  Identities=27%  Similarity=0.410  Sum_probs=217.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |+..|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.  .++..+.||++|+++++++++++.++
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG--GGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            4446999999999999999999999999999999999999999999888886  46778899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|+||+||||||+...  .++.+.+.++|++.+++|+.+++.++|+++|+|++  .|+||+++|..+..+.++...|++|
T Consensus       101 ~G~iDiLVNNAG~~~~--~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~as  176 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSM--LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAAS  176 (273)
T ss_dssp             HSCEEEEEECCCCCCC--CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHH
Confidence            9999999999998765  88999999999999999999999999999999965  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+.+|+|++|.||+++|||||+|+||+++|++............   +.+...+.+. .|.+|+.+|+|||++++||+
T Consensus       177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~---~~~~~~~~~~-~PlgR~g~peeiA~~v~FLa  252 (273)
T 4fgs_A          177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQ---QGLLNALAAQ-VPMGRVGRAEEVAAAALFLA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHH---HHHHHHHHHH-STTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhh---HHHHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999876554332211   1122223333 34599999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+.++|+||++|.+|||++.+
T Consensus       253 Sd~a~~iTG~~i~VDGG~s~V  273 (273)
T 4fgs_A          253 SDDSSFVTGAELFVDGGSAQV  273 (273)
T ss_dssp             SGGGTTCCSCEEEESTTTTTC
T ss_pred             CchhcCccCCeEeECcChhhC
Confidence            999999999999999999863

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=4.7e-58  Score=386.56  Aligned_cols=257  Identities=26%  Similarity=0.337  Sum_probs=217.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |.++|+||++|||||++|||+++|+.|+++|++|++++|+++..+...+......++.++.||++++++++++++++.++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999998765544332233467889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|++|||||+...   ...+.+.++|++.+++|+.+++.++|+++|+|+++ +|+||++||..+..+.++...|++|
T Consensus        81 ~G~iDiLVNnAGi~~~---~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~as  156 (258)
T 4gkb_A           81 FGRLDGLVNNAGVNDG---IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCAS  156 (258)
T ss_dssp             HSCCCEEEECCCCCCC---CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHH
T ss_pred             hCCCCEEEECCCCCCC---CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHH
Confidence            9999999999998643   34578999999999999999999999999999654 5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+.+|+|++|.||+++|||||+|+||+++|++...........+.    .........++.+|+.+|+|||++++||+
T Consensus       157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~----~~~~~~~~~plg~R~g~peeiA~~v~fLa  232 (258)
T 4gkb_A          157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEA----KLAEIAAKVPLGRRFTTPDEIADTAVFLL  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------C----HHHHHHTTCTTTTSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHH----HHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998765433221111    12222333444358999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      |+.++|+||++|.+|||+++.++++
T Consensus       233 S~~a~~iTG~~i~VDGG~T~l~~s~  257 (258)
T 4gkb_A          233 SPRASHTTGEWLFVDGGYTHLDRAL  257 (258)
T ss_dssp             SGGGTTCCSCEEEESTTTTTSCTTC
T ss_pred             CchhcCccCCeEEECCCcchhhhhh
Confidence            9999999999999999999998874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.7e-56  Score=369.72  Aligned_cols=240  Identities=28%  Similarity=0.390  Sum_probs=208.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+.  +..+.+. ...++.++.||++|+++++++++     +
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~--~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~   77 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD--ETLDIIAKDGGNASALLIDFADPLAAKDSFT-----D   77 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----T
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH--HHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----h
Confidence            68999999999999999999999999999999999998642  2222222 23578899999999998877653     4


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|.|.+++ .|+||+|||..+..+.++...|++|
T Consensus        78 g~iDiLVNNAGi~~~--~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~as  155 (247)
T 4hp8_A           78 AGFDILVNNAGIIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAA  155 (247)
T ss_dssp             TCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHH
Confidence            799999999999866  8899999999999999999999999999999997764 6999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+.+|+|++|.||+++|||||+|+||+++|++.........        ....... ..|.+|+.+|+|||++++||+
T Consensus       156 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~--------~~~~~~~-~~PlgR~g~peeiA~~v~fLa  226 (247)
T 4hp8_A          156 KHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAA--------RNKAILE-RIPAGRWGHSEDIAGAAVFLS  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHH--------HHHHHHT-TCTTSSCBCTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHH--------HHHHHHh-CCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999765433221        1112222 345599999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |++++|+||++|.+|||++.
T Consensus       227 Sd~a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          227 SAAADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCCcCCeEEECccccc
Confidence            99999999999999999863

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.1e-55  Score=364.03  Aligned_cols=233  Identities=29%  Similarity=0.431  Sum_probs=201.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+.+++     ....++..+.||++|+++++++++    ++|++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~i   79 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-----PRHPRIRREELDITDSQRLQRLFE----ALPRL   79 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-----CCCTTEEEEECCTTCHHHHHHHHH----HCSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-----hhcCCeEEEEecCCCHHHHHHHHH----hcCCC
Confidence            689999999999999999999999999999999999876542     123578899999999999877764    57999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||+.    .++.+.+.++|++.+++|+.+++.++|+++|.|+++ +|+||+|||..+..+.++...|++||+|+
T Consensus        80 DiLVNNAGi~----~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav  154 (242)
T 4b79_A           80 DVLVNNAGIS----RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAI  154 (242)
T ss_dssp             SEEEECCCCC----CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred             CEEEECCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHH
Confidence            9999999985    457789999999999999999999999999998654 59999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      .+|+|++|.||+++|||||+|+||+++|||........+.       . ....+. .|.+|+.+|+|+|++++||+|+.+
T Consensus       155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~-------~-~~~~~~-~PlgR~g~peeiA~~v~fLaSd~a  225 (242)
T 4b79_A          155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEA-------T-RRIMQR-TPLARWGEAPEVASAAAFLCGPGA  225 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHH-------H-HHHHHT-CTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHH-------H-HHHHhc-CCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999998765443221       1 112223 455999999999999999999999


Q ss_pred             CCeeecEEEeCCcccc
Q 023613          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      +|+||++|.+|||++.
T Consensus       226 ~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          226 SFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCccCceEEECccHhh
Confidence            9999999999999864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1e-54  Score=367.20  Aligned_cols=249  Identities=25%  Similarity=0.363  Sum_probs=211.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+..         ..+..++.+|++++++++++++++.+++|
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG---------LPEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------SCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999976421         12345788999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-~~~~Y~~sK  172 (280)
                      ++|++|||||+......++.+.+.++|++.+++|+.+++.++|+++|+|.+++.|+||+++|..+..+.+ +...|++||
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asK  157 (261)
T 4h15_A           78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAK  157 (261)
T ss_dssp             SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHH
T ss_pred             CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHH
Confidence            9999999999865543688999999999999999999999999999999998899999999999999876 578899999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHh--hhccCCCCCCCHHHHHHHHHH
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVA--RNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +|+.+|+|++|.||+++|||||+|+||+++|++............. ..+....+..  ....|.+|+.+|+|||++++|
T Consensus       158 aal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~f  237 (261)
T 4h15_A          158 AALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAF  237 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999987643221110000 0001111111  123456999999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+|+.++|+||++|.+|||+..
T Consensus       238 LaS~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          238 LASDRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTCSC
T ss_pred             HhCchhcCccCcEEEECCcCcc
Confidence            9999999999999999999854

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=4.6e-54  Score=359.24  Aligned_cols=230  Identities=27%  Similarity=0.467  Sum_probs=206.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++|||||++|||+++|+.|+++|++|++++|+++.++++.++   ..++.++.||++|+++++++++++.+++|++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999999999999999999999999999998877765543   347888999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      ||||||+...  .++.+.+.++|++.+++|+.+++.++|+++|.|.++ +|+||++||..+..+.++...|++||+|+.+
T Consensus        79 LVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~  155 (247)
T 3ged_A           79 LVNNACRGSK--GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVA  155 (247)
T ss_dssp             EEECCCCCCC--CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence            9999999766  889999999999999999999999999999999865 4999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCC
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  257 (280)
                      |+|++|.||++ |||||+|+||+++|++..+....             . .. ..|.+|+.+|+|||++++||+|+  +|
T Consensus       156 ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~-------------~-~~-~~Pl~R~g~pediA~~v~fL~s~--~~  217 (247)
T 3ged_A          156 LTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQE-------------D-CA-AIPAGKVGTPKDISNMVLFLCQQ--DF  217 (247)
T ss_dssp             HHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHH-------------H-HH-TSTTSSCBCHHHHHHHHHHHHHC--SS
T ss_pred             HHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHH-------------H-Hh-cCCCCCCcCHHHHHHHHHHHHhC--CC
Confidence            99999999997 99999999999999986543221             1 11 23559999999999999999984  69


Q ss_pred             eeecEEEeCCcccc
Q 023613          258 ISGTNLMVDGGFTS  271 (280)
Q Consensus       258 ~~G~~i~~dgG~~~  271 (280)
                      +|||+|.+|||++.
T Consensus       218 iTG~~i~VDGG~s~  231 (247)
T 3ged_A          218 ITGETIIVDGGMSK  231 (247)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CCCCeEEECcCHHH
Confidence            99999999999875

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=3.7e-53  Score=358.10  Aligned_cols=249  Identities=19%  Similarity=0.237  Sum_probs=218.7

Q ss_pred             ccccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      |++|+||++|||||+|  |||+++|+.|+++|++|++++|+++.++++.+.+..  ..++.++.||++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4679999999999875  999999999999999999999999888887776653  347889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           89 VEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      .+.+|++|++|||||+...  ....+.+.+.++|+..+++|+.+++.+.+.+.+.+.  ++|+||++||..+..+.+++.
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~~~~~~~  158 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEFAVQNYN  158 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTSCCTTTH
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccccCcccch
Confidence            9999999999999998643  124667889999999999999999999999998874  369999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+.+|+|+||.||+++|||||+|+||+++|++.......+.        ..+..... .|.+|+.+|+|||++
T Consensus       159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~--------~~~~~~~~-~Pl~R~g~peevA~~  229 (256)
T 4fs3_A          159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNT--------ILKEIKER-APLKRNVDQVEVGKT  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHH--------HHHHHHHH-STTSSCCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHH--------HHHHHHhc-CCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999999776543221        11222233 345999999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++||+|+.++|+||++|.+|||++-+
T Consensus       230 v~fL~Sd~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          230 AAYLLSDLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHhCchhcCccCCEEEECcCHHhc
Confidence            99999999999999999999999753

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.9e-51  Score=348.41  Aligned_cols=258  Identities=24%  Similarity=0.301  Sum_probs=222.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   ..++.++.||++|+++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888877766642   2358899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|+
T Consensus        83 ~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRV--STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATS  160 (265)
T ss_dssp             HHHCSCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhH
Confidence            999999999999999765  788999999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh-hccCCCCCCCHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-NANMQGTELTANDVANAVL  248 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~  248 (280)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.................+.....+ ...+.+++.+|+|+|++++
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  240 (265)
T 3lf2_A          161 AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAIL  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999998765432111000000111122111 1245599999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCccccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ||+++.+.++||++|.+|||+++.
T Consensus       241 fL~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          241 FLASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HHhCchhcCcCCCEEEECCCCcCC
Confidence            999999999999999999999864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7.5e-51  Score=345.25  Aligned_cols=253  Identities=27%  Similarity=0.394  Sum_probs=224.4

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +|.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  .++.++.+|++++++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999999999888877776542  478899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAY  168 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y  168 (280)
                      +.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+. .+.+++..|
T Consensus        84 ~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y  161 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPD--APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHY  161 (262)
T ss_dssp             HHHSCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHH
T ss_pred             HHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhh
Confidence            999999999999999765  78899999999999999999999999999999988888999999999986 788899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++||+++++|++.++.|++++||+||+|+||+++|++.....+.          +.....+. .+.+++.+|+|+|++++
T Consensus       162 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----------~~~~~~~~-~p~~r~~~p~dva~~v~  230 (262)
T 3pk0_A          162 GATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEE----------YIASMARS-IPAGALGTPEDIGHLAA  230 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHH----------HHHHHHTT-STTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHH----------HHHHHHhc-CCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999987643211          11122222 34489999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccccccccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      ||+++...++||++|.+|||+.......+
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~~~~~~~  259 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVLPESLDA  259 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTCCSSGGG
T ss_pred             HHhCccccCCcCCEEEECCCeecCcchhh
Confidence            99999999999999999999988654433

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.4e-50  Score=340.92  Aligned_cols=244  Identities=32%  Similarity=0.484  Sum_probs=219.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+.+..  ...++.+|++|+++++++++++.+.+
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD--NGKGMALNVTNPESIEAVLKAITDEF   81 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG--GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc--cceEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3568999999999999999999999999999999999999888887777653  46788999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+++..|++||
T Consensus        82 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (248)
T 3op4_A           82 GGVDILVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK  159 (248)
T ss_dssp             CCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence            999999999999865  788999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|+++|++.++.|++++||+||+|+||+++|++.....+.          ....... ..+.+++.+|+|+|++++||++
T Consensus       160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~-~~p~~r~~~p~dva~~v~~L~s  228 (248)
T 3op4_A          160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDE----------QRTATLA-QVPAGRLGDPREIASAVAFLAS  228 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHH----------HHHHHHH-TCTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHH----------HHHHHHh-cCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999987653221          1111112 2344899999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...++||+.+.+|||+.+
T Consensus       229 ~~~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          229 PEAAYITGETLHVNGGMYM  247 (248)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             CccCCccCcEEEECCCeec
Confidence            9999999999999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.1e-50  Score=341.41  Aligned_cols=246  Identities=33%  Similarity=0.477  Sum_probs=220.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888877776643 357889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++ +.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++|
T Consensus        87 ~g~id~lv~nAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGP--KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HSCCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence            9999999999999765  566 8999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|++.++.|++++||+||+|+||+++|++.......+         ........ .+.+++.+|+|+|++++||+
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---------~~~~~~~~-~p~~r~~~~~dva~~~~~L~  233 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPE---------IERAMLKH-TPLGRLGEAQDIANAALFLC  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHH---------HHHHHHTT-CTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHH---------HHHHHHhc-CCCCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999876543221         11122222 34489999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|++|.+|||+..
T Consensus       234 s~~~~~itG~~i~vdgG~~~  253 (256)
T 3gaf_A          234 SPAAAWISGQVLTVSGGGVQ  253 (256)
T ss_dssp             SGGGTTCCSCEEEESTTSCC
T ss_pred             CCcccCccCCEEEECCCccc
Confidence            99999999999999999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-50  Score=344.17  Aligned_cols=258  Identities=30%  Similarity=0.467  Sum_probs=223.5

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++.+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. ..++.++.+|++++++++++++++.+
T Consensus         2 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            2 VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35578999999999999999999999999999999999999988888888764 35788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccch
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYT  169 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~  169 (280)
                      .++++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+. .+.++...|+
T Consensus        82 ~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  160 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAM-GEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYA  160 (280)
T ss_dssp             HHSCCCEEEECCCCCCSC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHH
Confidence            999999999999987432 67889999999999999999999999999999998888999999999988 6788899999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.....+....      ......... .+.+++.+|+|+|++++|
T Consensus       161 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~~-~p~~r~~~pedvA~~v~~  233 (280)
T 3tox_A          161 ASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAP------ETRGFVEGL-HALKRIARPEEIAEAALY  233 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCT------HHHHHHHTT-STTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCH------HHHHHHhcc-CccCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999987653321111      011222222 344899999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccccccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      |+++...++||++|.+|||++...+-..
T Consensus       234 L~s~~a~~itG~~i~vdGG~~~~~~a~~  261 (280)
T 3tox_A          234 LASDGASFVTGAALLADGGASVTKAAEN  261 (280)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCC----
T ss_pred             HhCccccCCcCcEEEECCCccccccccc
Confidence            9999999999999999999998766543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.1e-50  Score=344.95  Aligned_cols=247  Identities=26%  Similarity=0.463  Sum_probs=209.9

Q ss_pred             CccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++++.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.  .++.++.+|++|+++++++++++.
T Consensus        19 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG--KDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             --CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEeecCCHHHHHHHHHHHH
Confidence            445678999999999999999999999999999999999999988888777664  478899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|+
T Consensus        97 ~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  174 (266)
T 3grp_A           97 REMEGIDILVNNAGITRD--GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYC  174 (266)
T ss_dssp             HHHTSCCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHH
Confidence            999999999999999765  778899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.....+.          ........ .+.+++.+|+|+|++++|
T Consensus       175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~----------~~~~~~~~-~p~~r~~~~edvA~~v~~  243 (266)
T 3grp_A          175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK----------QKEAIMAM-IPMKRMGIGEEIAFATVY  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH----------HHHHHHTT-CTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH----------HHHHHHhc-CCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999987654221          11112222 344899999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...++||++|.+|||+++
T Consensus       244 L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          244 LASDEAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTC--
T ss_pred             HhCccccCccCCEEEECCCeee
Confidence            9999999999999999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.2e-50  Score=344.74  Aligned_cols=249  Identities=30%  Similarity=0.409  Sum_probs=221.5

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  ..++.++.+|++|+++++++++++.
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   93 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA   93 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999999999888877666542  3578899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      +.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|
T Consensus        94 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  171 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISHP--QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAY  171 (266)
T ss_dssp             HHHTSCSEEEEECCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHH
Confidence            999999999999999865  7889999999999999999999999999999998765 6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|+|+++|++.++.|++++||+||+|+||+++|++.........        ....... ..+.+++.+|+|+|++++
T Consensus       172 ~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--------~~~~~~~-~~p~~r~~~p~dva~~v~  242 (266)
T 4egf_A          172 CTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEA--------KSAPMIA-RIPLGRFAVPHEVSDAVV  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHH--------HHHHHHT-TCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChH--------HHHHHHh-cCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999998765433211        1111122 234589999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ||+++...++||++|.+|||++.
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          243 WLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCchhcCccCcEEEECCCccC
Confidence            99999999999999999999875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-50  Score=341.27  Aligned_cols=253  Identities=29%  Similarity=0.419  Sum_probs=221.1

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.  .++.++.+|++|+++++++++++.+
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            4 SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG--RGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CCeEEEECCCCCHHHHHHHHHHHHH
Confidence            35567999999999999999999999999999999999999998888877774  4678889999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||+.......+.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (271)
T 3tzq_B           82 TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYAC  161 (271)
T ss_dssp             HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHH
Confidence            99999999999998743236788999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|+++|++.++.|++++||+||+|+||+++|++.....+..         ....... ..+.+++.+|+|+|++++||
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---------~~~~~~~-~~~~~r~~~p~dvA~~v~~L  231 (271)
T 3tzq_B          162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQP---------IVDIFAT-HHLAGRIGEPHEIAELVCFL  231 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHH---------HHHHHHT-TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHH---------HHHHHHh-cCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999876433221         1112222 23458999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +++...++||++|.+|||+....+.
T Consensus       232 ~s~~~~~itG~~i~vdGG~~~~~~~  256 (271)
T 3tzq_B          232 ASDRAAFITGQVIAADSGLLAHLPG  256 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTTTTBCTT
T ss_pred             hCcccCCcCCCEEEECCCccccCCC
Confidence            9999999999999999996554443

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=5.6e-50  Score=342.47  Aligned_cols=255  Identities=33%  Similarity=0.496  Sum_probs=223.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  .++.++.+|++++++++++++++.+.+
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG--SKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            456899999999999999999999999999999999999988888777764  468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||
T Consensus       100 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 4dqx_A          100 GRVDVLVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASK  177 (277)
T ss_dssp             SCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHH
Confidence            999999999998765  788899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|+++|++.++.|++++||+||+|+||+++|++............    ........ ..+.+++.+|+|+|+++++|++
T Consensus       178 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~----~~~~~~~~-~~~~~r~~~pedvA~~v~~L~s  252 (277)
T 4dqx_A          178 GAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPA----KLRSDFNA-RAVMDRMGTAEEIAEAMLFLAS  252 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHH----HHHHHHHT-TSTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchh----HHHHHHHh-cCcccCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998543221111100    01111122 2345899999999999999999


Q ss_pred             CCCCCeeecEEEeCCccccccccc
Q 023613          253 DEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      +...+++|++|.+|||++...+..
T Consensus       253 ~~~~~itG~~i~vdGG~~~~~~~~  276 (277)
T 4dqx_A          253 DRSRFATGSILTVDGGSSIGNHLV  276 (277)
T ss_dssp             GGGTTCCSCEEEESSSSSSCCTTC
T ss_pred             CccCCCcCCEEEECCchhhhhccC
Confidence            999999999999999999877654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.2e-50  Score=345.55  Aligned_cols=250  Identities=28%  Similarity=0.401  Sum_probs=222.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++|+++++++++++.+
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999888887777643 35788899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++
T Consensus       100 ~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a  177 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFR--KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTV  177 (271)
T ss_dssp             HTCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             HCCCCCEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHH
Confidence            99999999999999765  7889999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+++|++.++.|++++||+||+|+||+++|++........        .+..+..... +.+++.+|+|+|++++||
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~-p~~r~~~pedva~~v~~L  248 (271)
T 4ibo_A          178 AKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNP--------EFDAWVKART-PAKRWGKPQELVGTAVFL  248 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCH--------HHHHHHHHHS-TTCSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCH--------HHHHHHHhcC-CCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999865432111        1222223333 448999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...++||++|.+|||+...
T Consensus       249 ~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          249 SASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCccccCCCCcEEEECCCeecc
Confidence            9999999999999999998753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.9e-50  Score=338.82  Aligned_cols=244  Identities=31%  Similarity=0.445  Sum_probs=219.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  .++.++.+|++|+++++++++++.+.++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG--KKARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            46889999999999999999999999999999999999998888877774  5788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.+++..|+++|
T Consensus        80 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (247)
T 3rwb_A           80 GIDILVNNASIVPF--VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK  157 (247)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence            99999999999865  7889999999999999999999999999999998765 69999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|+++|++.++.|++++||+||+|+||+++|++.....+..         ...+. ....+.+++.+|+|+|++++||++
T Consensus       158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---------~~~~~-~~~~~~~r~~~pedva~~v~~L~s  227 (247)
T 3rwb_A          158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNE---------AFGFV-EMLQAMKGKGQPEHIADVVSFLAS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGG---------GHHHH-HHHSSSCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhH---------HHHHH-hcccccCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999876532211         11111 121334889999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...++||++|.+|||+++
T Consensus       228 ~~~~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          228 DDARWITGQTLNVDAGMVR  246 (247)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             ccccCCCCCEEEECCCccC
Confidence            9999999999999999875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=6.3e-50  Score=344.58  Aligned_cols=252  Identities=29%  Similarity=0.410  Sum_probs=223.7

Q ss_pred             CCCccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHH
Q 023613            8 DSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus         8 ~~~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~   85 (280)
                      ..+..+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  .++.++.||++|++++++++
T Consensus        31 ~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~  110 (293)
T 3rih_A           31 AERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAA  110 (293)
T ss_dssp             ---CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHH
T ss_pred             cccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHH
Confidence            3345567899999999999999999999999999999999999999998888887653  47889999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCC
Q 023613           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLG  164 (280)
Q Consensus        86 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~  164 (280)
                      +++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+. .+.++
T Consensus       111 ~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~  188 (293)
T 3rih_A          111 RTVVDAFGALDVVCANAGIFPE--ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG  188 (293)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCC
Confidence            9999999999999999999865  78899999999999999999999999999999988888999999999986 78889


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      +..|++||++++.|++.++.|++++||+||+|+||+++|++.....+.          +.....+. .+.+++.+|+|+|
T Consensus       189 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~----------~~~~~~~~-~p~~r~~~p~dvA  257 (293)
T 3rih_A          189 WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEE----------YISGMARS-IPMGMLGSPVDIG  257 (293)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHH----------HHHHHHTT-STTSSCBCHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHH----------HHHHHHhc-CCCCCCCCHHHHH
Confidence            999999999999999999999999999999999999999987553211          11112222 3458999999999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          245 NAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++||+++...+++|++|.+|||+...
T Consensus       258 ~~v~fL~s~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          258 HLAAFLATDEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTTTCB
T ss_pred             HHHHHHhCccccCCCCCEEEECCCccCC
Confidence            9999999999999999999999998863

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-50  Score=342.77  Aligned_cols=257  Identities=23%  Similarity=0.300  Sum_probs=220.2

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |...+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++|+++++++++++.+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45568999999999999999999999999999999999999888887777643 35788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.+++..|++
T Consensus        85 ~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a  162 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSM-KPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKM  162 (264)
T ss_dssp             HTSCCSEEEECCCSCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHH
T ss_pred             HcCCCcEEEECCCCCCCC-CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHH
Confidence            999999999999986432 7889999999999999999999999999999997654 99999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ||+|+++|++.++.|++++||+||+|+||+++|++............. ........... ..+.+++.+|+|+|++++|
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~p~dvA~~v~~  241 (264)
T 3ucx_A          163 AKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA-GSDLKRLPTEDEVASAILF  241 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT-TSSSSSCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc-cCCcccCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999987654321110000 00111222222 3345899999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...++||++|.+|||+++
T Consensus       242 L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          242 MASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTSSC
T ss_pred             HcCccccCCCCCEEEECCCccC
Confidence            9999999999999999999875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.7e-50  Score=344.47  Aligned_cols=247  Identities=30%  Similarity=0.437  Sum_probs=220.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.. ..++.++.+|++|+++++++++++.+
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999999999999999888777666543 34678899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+++..|++
T Consensus       102 ~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQD--QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAA  179 (270)
T ss_dssp             HHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHH
Confidence            99999999999998765  7788999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|++.|++.++.|++++||+||+|+||+++|++.....+.          ....... ..+.+++.+|+|+|++++||
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~-~~p~~r~~~pedvA~~v~~L  248 (270)
T 3ftp_A          180 AKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE----------QQTALKT-QIPLGRLGSPEDIAHAVAFL  248 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH----------HHHHHHT-TCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH----------HHHHHHh-cCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987653221          1111122 33458999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|++|.+|||+..
T Consensus       249 ~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          249 ASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HSGGGTTCCSCEEEESTTSSC
T ss_pred             hCCCcCCccCcEEEECCCccc
Confidence            999999999999999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1e-49  Score=336.91  Aligned_cols=249  Identities=28%  Similarity=0.415  Sum_probs=218.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +|.+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.  .++.++.+|++|+++++++++++.+.
T Consensus         2 ~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            2 VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHH
Confidence            3557899999999999999999999999999999999999988888777764  47889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+++..|++|
T Consensus        80 ~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  155 (255)
T 4eso_A           80 LGAIDLLHINAGVSEL--EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSAS  155 (255)
T ss_dssp             HSSEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHH
T ss_pred             hCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHH
Confidence            9999999999999765  78899999999999999999999999999999865  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|++.++.|++++||+||+|+||+++|++...........    ..+....... .+.+++.+|+|+|++++||+
T Consensus       156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~-~p~~r~~~pedvA~~v~~L~  230 (255)
T 4eso_A          156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAER----AEFKTLGDNI-TPMKRNGTADEVARAVLFLA  230 (255)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHH----HHHHHHHHHH-STTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhH----HHHHHHHhcc-CCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999865432111111    1122222222 34589999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++ ..++||+.|.+|||+...
T Consensus       231 s~-~~~itG~~i~vdGG~~~~  250 (255)
T 4eso_A          231 FE-ATFTTGAKLAVDGGLGQK  250 (255)
T ss_dssp             HT-CTTCCSCEEEESTTTTTT
T ss_pred             Cc-CcCccCCEEEECCCcccc
Confidence            98 889999999999999874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.6e-49  Score=335.05  Aligned_cols=249  Identities=24%  Similarity=0.309  Sum_probs=220.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++.. ..++.++.+|++|+++++++++++.+.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999986 8888888877777654 357889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+++..|++||+|
T Consensus        83 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           83 LDVFVNNAASGVL--RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            9999999998765  78899999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|++++||+++.
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~~~dva~~v~~L~s~~  231 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRED--------LLEDARQN-TPAGRMVEIKDMVDTVEFLVSSK  231 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHH--------HHHHHHHH-CTTSSCBCHHHHHHHHHHHTSST
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHH--------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999776433211        11112222 34489999999999999999999


Q ss_pred             CCCeeecEEEeCCccccccccc
Q 023613          255 ARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      .+++||++|.+|||++...+..
T Consensus       232 ~~~itG~~i~vdGG~~~~~~~~  253 (258)
T 3oid_A          232 ADMIRGQTIIVDGGRSLLVLEH  253 (258)
T ss_dssp             TTTCCSCEEEESTTGGGBCC--
T ss_pred             cCCccCCEEEECCCccCCCCCC
Confidence            9999999999999998865543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.6e-50  Score=342.03  Aligned_cols=255  Identities=29%  Similarity=0.397  Sum_probs=217.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... .++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999999888888887643 5788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc--cCCCCccc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI--GGLGPHAY  168 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~--~~~~~~~Y  168 (280)
                      .++++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..  +.++...|
T Consensus       102 ~~g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y  180 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVW-APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAY  180 (283)
T ss_dssp             HHSCCCEEEECCCCCCCB-CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHH
T ss_pred             HhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHH
Confidence            999999999999986432 678899999999999999999999999999999888889999999999987  77889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCC--CCCCCHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANA  246 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~  246 (280)
                      ++||+|+++|++.++.|++++||+||+|+||+++|++.............   ....+.. ...+.  +++.+|+|+|++
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~---~~~~~~~-~~~p~~~~r~~~pedvA~~  256 (283)
T 3v8b_A          181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETA---IPVEWPK-GQVPITDGQPGRSEDVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHS---CCCBCTT-CSCGGGTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhh---hhhhhhh-hcCccccCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999997654322111000   0001111 11223  889999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCcccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++||+++.+.++||++|.+|||++.
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHcCccccCCcCCEEEECcCccc
Confidence            9999999999999999999999865

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=7.4e-50  Score=338.58  Aligned_cols=255  Identities=35%  Similarity=0.458  Sum_probs=219.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  .++.++.+|++++++++++++++.++
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~   79 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--PAAYAVQMDVTRQDSIDAAIAATVEH   79 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999998888887775  46788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++
T Consensus        80 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (259)
T 4e6p_A           80 AGGLDILVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA  157 (259)
T ss_dssp             SSSCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             cCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence            9999999999999765  7889999999999999999999999999999997765 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ||+++++|++.++.|++++||+||+|+||+++|++............. ........... ..+.+++.+|+|+|++++|
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~~~dva~~v~~  236 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGE-AVPFGRMGTAEDLTGMAIF  236 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHH-HSTTSSCBCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhc-cCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999986543100000000 00001111222 2345899999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|++|.+|||+..
T Consensus       237 L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          237 LASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             TTSGGGTTCCSCEEEESTTSSC
T ss_pred             HhCCccCCCCCCEEEECcChhc
Confidence            9999999999999999999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.5e-49  Score=343.39  Aligned_cols=259  Identities=29%  Similarity=0.412  Sum_probs=215.5

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhCC-CCCeEEEecCCCC
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLGG-EPDTFFCHCDVTK   77 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~~-~~~~~~~~~D~~~   77 (280)
                      .|+.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++.. ..++.++.+|++|
T Consensus        21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD  100 (299)
T ss_dssp             -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC
Confidence            35567999999999999999999999999999999999987            5555555555432 3578899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccc
Q 023613           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSV  156 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~  156 (280)
                      +++++++++++.+.++++|+||||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||.
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~  179 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEG-TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSI  179 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence            9999999999999999999999999987652 3488999999999999999999999999999987764 6899999999


Q ss_pred             cccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh----hhhhhhhHHHH-Hhhhc
Q 023613          157 AGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER----TEDAMVGFRNF-VARNA  231 (280)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~  231 (280)
                      .+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++..........    .......+... .....
T Consensus       180 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (299)
T 3t7c_A          180 GGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV  259 (299)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS
T ss_pred             hhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc
Confidence            99999999999999999999999999999999999999999999999986532100000    00000001111 11122


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       232 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .+ +++.+|+|+|++++||+++.++++||++|.+|||++.
T Consensus       260 ~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          260 LP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             SS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            23 7889999999999999999999999999999999875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.3e-49  Score=341.85  Aligned_cols=259  Identities=31%  Similarity=0.403  Sum_probs=215.9

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----------------cchHHHHHHHhCC-CCCeEEEec
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----------------DNLGQQVCQSLGG-EPDTFFCHC   73 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~----------------~~~~~~~~~~~~~-~~~~~~~~~   73 (280)
                      +|+.+++||++|||||++|||+++|++|+++|++|++++|+                .+.+++..+.+.. ..++.++.+
T Consensus         4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (286)
T 3uve_A            4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEV   83 (286)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred             CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEc
Confidence            45667999999999999999999999999999999999887                5556666555543 357889999


Q ss_pred             CCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEE
Q 023613           74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIIS  152 (280)
Q Consensus        74 D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~  152 (280)
                      |++++++++++++++.+.++++|+||||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||+
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~  162 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG-DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL  162 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            99999999999999999999999999999987652 3588999999999999999999999999999998765 689999


Q ss_pred             EccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh----hhhhhhhHHHHH-
Q 023613          153 ICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER----TEDAMVGFRNFV-  227 (280)
Q Consensus       153 isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~----~~~~~~~~~~~~-  227 (280)
                      +||..+..+.++...|++||+|+++|++.++.|++++||+||+|+||+++|++..........    ............ 
T Consensus       163 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
T 3uve_A          163 TSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQ  242 (286)
T ss_dssp             ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH
T ss_pred             ECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHH
Confidence            999999999999999999999999999999999999999999999999999987531100000    000000011111 


Q ss_pred             hhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          228 ARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       228 ~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .....+ +++.+|+|+|++++||+++.+.++||++|.+|||++.
T Consensus       243 ~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          243 MFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             TTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            112233 7899999999999999999999999999999999874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-49  Score=340.97  Aligned_cols=258  Identities=28%  Similarity=0.483  Sum_probs=211.9

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .++.++++|++|||||++|||+++|++|+++|++|++++| +.+.++...+++..  ..++.++.+|++|++++++++++
T Consensus        18 ~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   97 (281)
T 3v2h_A           18 LYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM   97 (281)
T ss_dssp             ----CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred             hhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence            3466789999999999999999999999999999999999 55666666666543  35788999999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  167 (280)
                      +.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...
T Consensus        98 ~~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  175 (281)
T 3v2h_A           98 VADRFGGADILVNNAGVQFV--EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSA  175 (281)
T ss_dssp             HHHHTSSCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchH
Confidence            99999999999999999765  7888999999999999999999999999999998888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh--hhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED--AMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      |++||+|+++|++.++.|++++||+||+|+||+++|++.....+.......  ..........+ ..+.+++.+|+|+|+
T Consensus       176 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~~edvA~  254 (281)
T 3v2h_A          176 YVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLK-GQPTKKFITVEQVAS  254 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------------------CCTTCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHh-cCCCCCccCHHHHHH
Confidence            999999999999999999999999999999999999997765432211100  00001111222 234589999999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++||+++...+++|++|.+|||++.
T Consensus       255 ~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          255 LALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHHcCCCcCCCCCcEEEECCCccC
Confidence            99999999999999999999999864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-49  Score=339.05  Aligned_cols=257  Identities=27%  Similarity=0.415  Sum_probs=215.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhCC-CCCeEEEecCCCCH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLGG-EPDTFFCHCDVTKE   78 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~~-~~~~~~~~~D~~~~   78 (280)
                      .|.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.. ..++.++.+|++|+
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            4567999999999999999999999999999999999997            3444444444432 35788999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      ++++++++++.+.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTI--ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCC--CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            99999999999999999999999999765  7889999999999999999999999999999998888899999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCch----hhhhhhhhhHHHHH-hhhccC
Q 023613          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE----ERTEDAMVGFRNFV-ARNANM  233 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~  233 (280)
                      ..+.++...|++||+|+++|++.++.|++++||+||+|+||+++|++........    .............. .....+
T Consensus       162 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (281)
T 3s55_A          162 HSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY  241 (281)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC
Confidence            9999999999999999999999999999999999999999999999875321000    00000000011111 112223


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                       +++.+|+|+|++++||+++...++||++|.+|||+..
T Consensus       242 -~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          242 -APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence             7899999999999999999999999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1e-49  Score=340.98  Aligned_cols=257  Identities=30%  Similarity=0.381  Sum_probs=214.6

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-------------CcchHHHHHHHhCC-CCCeEEEecCCC
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-------------QDNLGQQVCQSLGG-EPDTFFCHCDVT   76 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-------------~~~~~~~~~~~~~~-~~~~~~~~~D~~   76 (280)
                      .|+.+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+.. ..++.++.+|++
T Consensus         4 ~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   83 (277)
T 3tsc_A            4 SMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR   83 (277)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             ccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence            3556799999999999999999999999999999999998             45556655555532 357889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEcc
Q 023613           77 KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICS  155 (280)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS  155 (280)
                      |+++++++++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  161 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAP--QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS  161 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            9999999999999999999999999999865  7888999999999999999999999999999998765 689999999


Q ss_pred             ccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHhhhccCC
Q 023613          156 VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQ  234 (280)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  234 (280)
                      ..+..+.++...|++||+|++.|++.++.|++++||+||+|+||+++|++............. .......... ...+ 
T Consensus       162 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-  239 (277)
T 3tsc_A          162 AAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLT-PFLP-  239 (277)
T ss_dssp             GGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTC-CSSS-
T ss_pred             HhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhh-hccC-
Confidence            999999999999999999999999999999999999999999999999986542110000000 0000111111 1122 


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       235 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .++.+|+|+|++++||+++.+.++||++|.+|||++.
T Consensus       240 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          240 DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            3789999999999999999999999999999999874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.9e-49  Score=338.80  Aligned_cols=252  Identities=30%  Similarity=0.333  Sum_probs=220.2

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      .|..++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++...    .++.++.+|++|+++++++++
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   83 (281)
T 3svt_A            4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVD   83 (281)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHH
Confidence            3556799999999999999999999999999999999999998888877776432    268889999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        87 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      ++.+.++++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++..
T Consensus        84 ~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  162 (281)
T 3svt_A           84 AVTAWHGRLHGVVHCAGGSENI-GPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFG  162 (281)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCT
T ss_pred             HHHHHcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCCh
Confidence            9999999999999999984432 678899999999999999999999999999999988889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+++++|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|++
T Consensus       163 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~~~dva~~  233 (281)
T 3svt_A          163 AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAE--------LSSDYAMC-TPLPRQGEVEDVANM  233 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHH--------HHHHHHHH-CSSSSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHH--------HHHHHHhc-CCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999998765322111        11111222 345899999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++|+++...+++|+++.+|||+...
T Consensus       234 ~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          234 AMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHhCcccCCCCCCEEEeCCChhcc
Confidence            99999999999999999999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=4.3e-49  Score=335.89  Aligned_cols=263  Identities=27%  Similarity=0.382  Sum_probs=214.5

Q ss_pred             CCCCCCCCCCccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCH
Q 023613            1 MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKE   78 (280)
Q Consensus         1 m~~~~~~~~~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~   78 (280)
                      |+...+...+.++.+++||++|||||++|||+++|++|+++|++|++++++ .+.++++.+++.. ..++.++.+|++|+
T Consensus         1 m~~~~~~~~~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   80 (270)
T 3is3_A            1 MPHVENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV   80 (270)
T ss_dssp             ----------CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred             CCCccccccccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence            555555555556678999999999999999999999999999999997764 4555555555533 35788999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc-
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA-  157 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~-  157 (280)
                      ++++++++++.+.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||.. 
T Consensus        81 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~  156 (270)
T 3is3_A           81 PEIVKLFDQAVAHFGHLDIAVSNSGVVSF--GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTS  156 (270)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchh
Confidence            99999999999999999999999999865  78899999999999999999999999999999965  68999999988 


Q ss_pred             ccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCC----chhhhhhhhhhHHHHHhhhccC
Q 023613          158 GAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP----EEERTEDAMVGFRNFVARNANM  233 (280)
Q Consensus       158 ~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  233 (280)
                      ...+.++...|++||+|+++|++.++.|++++||+||+|+||+++|++......    .......  ......... ..+
T Consensus       157 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~p  233 (270)
T 3is3_A          157 KDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTA--EQRQQMAAH-ASP  233 (270)
T ss_dssp             TTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCH--HHHHHHHHH-HST
T ss_pred             ccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccch--HHHHHHHHh-cCC
Confidence            567888999999999999999999999999999999999999999999763211    1000000  112222222 334


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .+++.+|+|+|++++||+++...++||++|.+|||+.
T Consensus       234 ~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          234 LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            5999999999999999999999999999999999973

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.8e-49  Score=338.01  Aligned_cols=252  Identities=31%  Similarity=0.497  Sum_probs=217.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.  .++.++.+|++|+++++++++++.+.
T Consensus        23 ~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           23 NHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG--CGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             ----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--SSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CcceEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999998888877774  56788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++|
T Consensus       101 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  178 (277)
T 3gvc_A          101 FGGVDKLVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMS  178 (277)
T ss_dssp             HSSCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHH
Confidence            9999999999999865  78889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|++.|++.++.|++++||+||+|+||+++|++.....+.......  .......  ...+.+++.+|+|+|++++||+
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~r~~~pedvA~~v~~L~  254 (277)
T 3gvc_A          179 KAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALG--AGGARSM--IARLQGRMAAPEEMAGIVVFLL  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC--------CCHHHH--HHHHHSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHH--HHhhhhh--hhccccCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999986543221000000  0000000  0112378999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...++||++|.+|||+..
T Consensus       255 s~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          255 SDDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CCccCCccCcEEEECCcchh
Confidence            99999999999999999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5e-49  Score=333.12  Aligned_cols=249  Identities=27%  Similarity=0.401  Sum_probs=217.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... .++.++.+|++++++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999999988888887653 578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcc-cCCCceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|. +...|+||++||..+..+.++...|++|
T Consensus        82 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (257)
T 3imf_A           82 GRIDILINNAAGNFI--CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA  159 (257)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHH
Confidence            999999999998765  7889999999999999999999999999999994 4457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHC-CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          172 KHAVLGLNKNVAAELG-KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~-~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      |+|+++|++.++.|++ ++||+||+|+||+++|++..........       ....... ..+.+++.+|+|+|++++||
T Consensus       160 Kaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~-------~~~~~~~-~~p~~r~~~pedvA~~v~~L  231 (257)
T 3imf_A          160 KAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEE-------MAKRTIQ-SVPLGRLGTPEEIAGLAYYL  231 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------C-------CSHHHHT-TSTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHH-------HHHHHHh-cCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999997 6799999999999999976543211111       1111112 23448999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...++||+++.+|||+...
T Consensus       232 ~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          232 CSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HSGGGTTCCSCEEEESTTTTSC
T ss_pred             cCchhcCccCCEEEECCCcccC
Confidence            9999999999999999998764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.9e-49  Score=339.65  Aligned_cols=254  Identities=31%  Similarity=0.379  Sum_probs=216.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.. ..++.++.||++|+++++++++++.+.++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999999888887777754 35788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHH--hcccCCCceEEEEccccccccCCCCccchhh
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR--IMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|  .|.+++.|+||++||..+..+.++...|++|
T Consensus       101 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  178 (279)
T 3sju_A          101 PIGILVNSAGRNGG--GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTAS  178 (279)
T ss_dssp             SCCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHH
Confidence            99999999999765  7888999999999999999999999999999  5777777999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      |+|+++|++.++.|++++||+||+|+||+++|++............. ............ .+.+++.+|+|+|++++||
T Consensus       179 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~pedvA~~v~~L  257 (279)
T 3sju_A          179 KHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAK-IPLGRYSTPEEVAGLVGYL  257 (279)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTT-CTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhc-CCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999986542110000000 001111222222 3448999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...++||++|.+|||++.
T Consensus       258 ~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          258 VTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             TSSGGGGCCSCEEEESTTCCC
T ss_pred             hCccccCcCCcEEEECCCccC
Confidence            999999999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.8e-49  Score=339.42  Aligned_cols=250  Identities=27%  Similarity=0.351  Sum_probs=219.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  ..++.++.+|++++++++++++++.+
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3458999999999999999999999999999999999998887776666532  35788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++
T Consensus       102 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFL--CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS  179 (277)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHH
T ss_pred             HcCCCCEEEECCcCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHH
Confidence            99999999999998765  7888999999999999999999999999999998877899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|+++|++.++.|++++||+||+|+||+++|++..........       ....... ..+.+++.+|+|+|++++||
T Consensus       180 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~-------~~~~~~~-~~p~~r~~~p~dvA~~v~fL  251 (277)
T 4fc7_A          180 AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQA-------SLSTKVT-ASPLQRLGNKTEIAHSVLYL  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHH-------HHHHHHH-TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHH-------HHHHHhc-cCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999864332221111       1111122 23458999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++.++++||++|.+|||+...
T Consensus       252 ~s~~~~~itG~~i~vdGG~~~~  273 (277)
T 4fc7_A          252 ASPLASYVTGAVLVADGGAWLT  273 (277)
T ss_dssp             HSGGGTTCCSCEEEESTTHHHH
T ss_pred             cCCccCCcCCCEEEECCCcccC
Confidence            9999999999999999998764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-49  Score=339.09  Aligned_cols=257  Identities=28%  Similarity=0.414  Sum_probs=215.0

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-------------CcchHHHHHHHhCC-CCCeEEEecCCC
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-------------QDNLGQQVCQSLGG-EPDTFFCHCDVT   76 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-------------~~~~~~~~~~~~~~-~~~~~~~~~D~~   76 (280)
                      .++.+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+.. ..++.++.+|++
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            3456799999999999999999999999999999999998             56666666666543 357889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEcc
Q 023613           77 KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICS  155 (280)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS  155 (280)
                      |+++++++++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSW--GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS  165 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            9999999999999999999999999999865  7888999999999999999999999999999998765 799999999


Q ss_pred             ccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCC
Q 023613          156 VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG  235 (280)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (280)
                      ..+..+.++...|++||+|+++|++.++.|++++||+||+|+||+++|++.............+ .....+......+ .
T Consensus       166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~  243 (280)
T 3pgx_A          166 SAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHP-SFVHSFPPMPVQP-N  243 (280)
T ss_dssp             GGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCG-GGGGGSCCBTTBC-S
T ss_pred             hhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCc-hhhhhhhhcccCC-C
Confidence            9999999999999999999999999999999999999999999999999864311000000000 0000000111122 3


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       236 ~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++.+|+|+|++++||+++...++||++|.+|||++.
T Consensus       244 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            689999999999999999999999999999999864

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=5.8e-49  Score=335.98  Aligned_cols=245  Identities=34%  Similarity=0.501  Sum_probs=216.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. ..++.++.||++|+++++++++++.+.
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888887777643 357889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccC--CCCccc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGG--LGPHAY  168 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~--~~~~~Y  168 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.  ++...|
T Consensus       107 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  184 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHY  184 (276)
T ss_dssp             HSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHH
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchH
Confidence            9999999999999865  7888999999999999999999999999999998766 4899999999987664  356889


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++||+|++.|++.++.|++++||+||+|+||+++|++......           ....... ..+.+++.+|+|+|++++
T Consensus       185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-----------~~~~~~~-~~p~~r~~~pedvA~~v~  252 (276)
T 3r1i_A          185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-----------YHALWEP-KIPLGRMGRPEELTGLYL  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-----------GHHHHGG-GSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-----------HHHHHHh-cCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999998754311           1111122 234489999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ||+++.+.++||++|.+|||++.
T Consensus       253 fL~s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHcCccccCccCcEEEECcCccC
Confidence            99999999999999999999864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-49  Score=339.88  Aligned_cols=252  Identities=23%  Similarity=0.339  Sum_probs=199.7

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .|+.++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.. ..++.++.+|++|+++++++++++
T Consensus        22 ~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           22 SMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             -CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            3556789999999999999999999999999999999986 66666666666543 357889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCC
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~  165 (280)
                      .+.++++|+||||||+......++.+.+.++|++.+++|+.+++.++++++|.|.+++   .|+||++||..+..+.++.
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  181 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER  181 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence            9999999999999998432237888999999999999999999999999999997755   6899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|++||+|+++|++.++.|++++||+||+|+||+++|++.....+..          .........+.+++.+|+|+|+
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~p~~r~~~pedvA~  251 (280)
T 4da9_A          182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY----------DGLIESGLVPMRRWGEPEDIGN  251 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------------CCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH----------HHHHhhcCCCcCCcCCHHHHHH
Confidence            999999999999999999999999999999999999999976543211          1111121234489999999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++||+++.+.++||++|.+|||++..
T Consensus       252 ~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          252 IVAGLAGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             HHHHHHTSTTGGGTTCEEEESTTCC--
T ss_pred             HHHHHhCccccCCCCCEEEECCCcccC
Confidence            999999999999999999999998763

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=5.2e-49  Score=330.92  Aligned_cols=243  Identities=33%  Similarity=0.519  Sum_probs=214.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +.+|++|||||++|||+++|++|+++|++|++++|+ .+..++..+.+.. ..++.++.+|++|+++++++++++.+.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            568999999999999999999999999999988774 4666666555543 35788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||+
T Consensus        82 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (246)
T 3osu_A           82 SLDVLVNNAGITRD--NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKA  159 (246)
T ss_dssp             CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            99999999999765  7889999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      |+++|++.++.|++++||+||+|+||+++|++.....+.          ....... ..+.+++.+|+|+|+++++|+++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----------~~~~~~~-~~p~~r~~~~~dva~~v~~l~s~  228 (246)
T 3osu_A          160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE----------LKEQMLT-QIPLARFGQDTDIANTVAFLASD  228 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHH----------HHHHHHT-TCTTCSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHH----------HHHHHHh-cCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999997653221          1111222 23448999999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...++||++|.+|||+.+
T Consensus       229 ~~~~itG~~i~vdgG~~~  246 (246)
T 3osu_A          229 KAKYITGQTIHVNGGMYM  246 (246)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             cccCCCCCEEEeCCCccC
Confidence            999999999999999863

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=3e-49  Score=336.60  Aligned_cols=244  Identities=34%  Similarity=0.537  Sum_probs=215.2

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ...++++|++|||||++|||+++|++|+++|++|++++| +.+..+++.+.+.. ..++.++.+|++|+++++++++++.
T Consensus        22 ~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             --CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999888 55556665555532 3578899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|+
T Consensus       102 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  179 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRD--TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYS  179 (269)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHH
Confidence            999999999999999865  778899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|+++|++.++.|++++||+||+|+||+++|++......             .... ...+.+++.+|+|+|++++|
T Consensus       180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------------~~~~-~~~p~~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-------------EKLL-EVIPLGRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-------------HHHG-GGCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-------------HHHH-hcCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998643211             1111 22345899999999999999


Q ss_pred             hcCC-CCCCeeecEEEeCCcccc
Q 023613          250 LASD-EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~-~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++ ...++||++|.+|||+.+
T Consensus       246 l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTSCC
T ss_pred             HhCCcccCCCcCCEEEECCCeec
Confidence            9997 788999999999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-48  Score=332.84  Aligned_cols=243  Identities=27%  Similarity=0.388  Sum_probs=203.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.+++|++|||||++|||+++|++|+++|++|+++ .|+.+..+++.+.+.. ..++.++.+|++++++++++++++.+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999987 4555566666555532 357889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+++..|++|
T Consensus       103 ~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  178 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPL--TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAA  178 (267)
T ss_dssp             HSCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHH
Confidence            9999999999999765  78899999999999999999999999999999965  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|++.++.|++++||+||+|+||+++|++.......+         ....... ..+.+++.+|+|+|++++||+
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---------~~~~~~~-~~p~~r~~~pedvA~~v~~L~  248 (267)
T 3u5t_A          179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE---------VRDRFAK-LAPLERLGTPQDIAGAVAFLA  248 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------------CHHHHHT-SSTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHH---------HHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999975532211         1111122 234589999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccc
Q 023613          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++...++||++|.+|||+.
T Consensus       249 s~~~~~itG~~i~vdGG~~  267 (267)
T 3u5t_A          249 GPDGAWVNGQVLRANGGII  267 (267)
T ss_dssp             STTTTTCCSEEEEESSSCC
T ss_pred             CccccCccCCEEEeCCCcC
Confidence            9999999999999999973

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.6e-48  Score=330.63  Aligned_cols=253  Identities=32%  Similarity=0.453  Sum_probs=208.2

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  .++.++.+|+++.++++++++++.+.
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG--DAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHh
Confidence            3457899999999999999999999999999999999999998888887775  46888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC----CceEEEEccccccccCCCCcc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT----KGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~iv~isS~~~~~~~~~~~~  167 (280)
                      ++++|++|||||+...+ .++.+.+.++|++.+++|+.+++.++++++|.|.+++    .++||++||..+..+.+++..
T Consensus        81 ~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  159 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKP-QNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW  159 (261)
T ss_dssp             HSCCCEEEECCCCCCCS-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHH
T ss_pred             cCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccH
Confidence            99999999999987532 6788889999999999999999999999999997653    678999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+++|+|+++|++.++.|++++||+|++|+||+++|++..........      ........ ..+.+++.+|+|+|+++
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~dva~~~  232 (261)
T 3n74_A          160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSE------EIRKKFRD-SIPMGRLLKPDDLAEAA  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------CTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcH------HHHHHHhh-cCCcCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999997765432111      01111122 23448999999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCccccccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ++|+++...+++|++|.+|||++....
T Consensus       233 ~~l~s~~~~~itG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          233 AFLCSPQASMITGVALDVDGGRSIGGR  259 (261)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTTC---
T ss_pred             HHHcCCcccCcCCcEEEecCCcccCCC
Confidence            999999999999999999999988654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-48  Score=332.34  Aligned_cols=245  Identities=29%  Similarity=0.432  Sum_probs=211.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++||++|||||++|||+++|++|+++|++|++++|++. .++..+++. ...++.++.+|++|.++++++.+.+ +.+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-~~~  104 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEEL-AAT  104 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH-HHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH-Hhc
Confidence            4689999999999999999999999999999999997643 444444443 3457889999999999999995544 556


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||
T Consensus       105 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  182 (273)
T 3uf0_A          105 RRVDVLVNNAGIIAR--APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASK  182 (273)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCcEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHH
Confidence            999999999999865  788999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|++.|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|++++||++
T Consensus       183 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~pedva~~v~~L~s  253 (273)
T 3uf0_A          183 HAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDE--------RAAEITAR-IPAGRWATPEDMVGPAVFLAS  253 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHH--------HHHHHHHH-STTSSCBCGGGGHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHH--------HHHHHHhc-CCCCCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998654322111        11111222 344899999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|++|.+|||+..
T Consensus       254 ~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          254 DAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCCcCCEEEECcCccC
Confidence            9999999999999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.5e-48  Score=328.77  Aligned_cols=253  Identities=28%  Similarity=0.393  Sum_probs=215.5

Q ss_pred             CCCCCccccccCCcEEEEEcCC-ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHH
Q 023613            6 STDSSPAVQRLVGRVALITGGA-TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVC   82 (280)
Q Consensus         6 ~~~~~~~~~~l~~k~vlItGa~-~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~   82 (280)
                      .|...+.+.++++|++|||||+ +|||+++|++|+++|++|++++|+.+.+++..+++..  ..++.++.+|++++++++
T Consensus        10 ~~~~~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~   89 (266)
T 3o38_A           10 APKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVD   89 (266)
T ss_dssp             CCCCCCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHH
T ss_pred             CccccccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHH
Confidence            3333344567899999999997 6999999999999999999999999888887777743  257899999999999999


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEcccccccc
Q 023613           83 SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIG  161 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~  161 (280)
                      ++++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.++ ..++||++||..+..+
T Consensus        90 ~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~  167 (266)
T 3o38_A           90 ALITQTVEKAGRLDVLVNNAGLGGQ--TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA  167 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC
T ss_pred             HHHHHHHHHhCCCcEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC
Confidence            9999999999999999999998765  788899999999999999999999999999999876 5689999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHH
Q 023613          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      .++...|+++|+|++.|++.++.|++++||+||+|+||+++|++.......+         ....... ..+.+++.+|+
T Consensus       168 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~-~~~~~r~~~~~  237 (266)
T 3o38_A          168 QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSE---------LLDRLAS-DEAFGRAAEPW  237 (266)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------------CCTTSSCCCHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHH---------HHHHHHh-cCCcCCCCCHH
Confidence            9999999999999999999999999999999999999999999976543321         1111122 23348999999


Q ss_pred             HHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          242 DVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       242 dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+|+++++|+++...+++|++|.+|||++
T Consensus       238 dva~~i~~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          238 EVAATIAFLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSCCC
T ss_pred             HHHHHHHHHcCccccCccCCEEEEcCCcC
Confidence            99999999999988999999999999974

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-48  Score=329.61  Aligned_cols=244  Identities=27%  Similarity=0.440  Sum_probs=199.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.  .++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG--AAVRFRNADVTNEADATAALAFAKQEF   79 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999999988777666653  467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCC----CCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC------CCceEEEEccccccccC
Q 023613           93 GTLDIMVNNAGISGAPCPDI----READLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGG  162 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~  162 (280)
                      +++|++|||||+...  ..+    .+.+.++|++.+++|+.+++.++++++|.|.++      +.|+||++||..+..+.
T Consensus        80 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           80 GHVHGLVNCAGTAPG--EKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             SCCCEEEECCCCCCC--CCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             CCCCEEEECCCCCCC--CccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence            999999999998754  333    367899999999999999999999999999874      56899999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ++...|++||+|+++|++.++.|++++||+||+|+||+++|++.....+.          .........++.+++.+|+|
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----------~~~~~~~~~p~~~r~~~~~d  227 (257)
T 3tpc_A          158 IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD----------VQDALAASVPFPPRLGRAEE  227 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------------CCSSSSCSCBCHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH----------HHHHHHhcCCCCCCCCCHHH
Confidence            99999999999999999999999999999999999999999997653221          11111222222388999999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+++++|+++  .+++|+++.+|||++..
T Consensus       228 va~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          228 YAALVKHICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHHHHHHHHC--TTCCSCEEEESTTCCC-
T ss_pred             HHHHHHHHccc--CCcCCcEEEECCCccCC
Confidence            99999999975  79999999999998764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=3.1e-49  Score=337.52  Aligned_cols=248  Identities=21%  Similarity=0.304  Sum_probs=217.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|+++.++++++++++.+
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999888877776643 35788999999999999999999988


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      . +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+....|++
T Consensus       107 ~-g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  183 (275)
T 4imr_A          107 I-APVDILVINASAQIN--ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAA  183 (275)
T ss_dssp             H-SCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             h-CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHH
Confidence            7 999999999998765  7889999999999999999999999999999998888899999999999998888888999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|+++|++.++.|++++||+||+|+||+++|++.........      .....+. ....+.+++.+|+|+|++++||
T Consensus       184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~------~~~~~~~-~~~~p~~r~~~pedvA~~v~fL  256 (275)
T 4imr_A          184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDP------EGWDEYV-RTLNWMGRAGRPEEMVGAALFL  256 (275)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCH------HHHHHHH-HHHSTTCSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccCh------HHHHHHH-hhcCccCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998654321111      1122222 2222458999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcc
Q 023613          251 ASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~  269 (280)
                      +++.++++||++|.+|||+
T Consensus       257 ~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          257 ASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             HSGGGTTCCSCEEEESSCC
T ss_pred             cCcccCCCCCCEEEeCCCC
Confidence            9999999999999999995

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=6.6e-48  Score=332.16  Aligned_cols=250  Identities=21%  Similarity=0.239  Sum_probs=208.9

Q ss_pred             ccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+++||++|||||+  +|||+++|++|+++|++|++++|+++..+.+.+......++.++.||++|+++++++++++.+
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999  559999999999999999999999654333332222224678899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           91 KFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .++++|+||||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+++..|
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y  183 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVM  183 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHH
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHH
Confidence            99999999999998751  0167889999999999999999999999999999965  6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++||+|++.|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|++++
T Consensus       184 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~r~~~pedvA~~v~  254 (293)
T 3grk_A          184 GVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRY--------ILKWNEYN-APLRRTVTIDEVGDVGL  254 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHH--------HHHHHHHH-STTSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHH--------HHHHHHhc-CCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998765432111        11222222 34489999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ||+++...++||++|.+|||+....
T Consensus       255 ~L~s~~~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          255 YFLSDLSRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHcCccccCCcceEEEECCCcccCC
Confidence            9999999999999999999998754

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=5.5e-48  Score=333.19  Aligned_cols=249  Identities=22%  Similarity=0.237  Sum_probs=213.3

Q ss_pred             ccccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++++|++|||||++  |||+++|++|+++|++|++++|+++..+.+.+.......+.++.||++|+++++++++++.+
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            3468999999999996  99999999999999999999999765544433332223467899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           91 KFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .++++|+||||||+...  ...++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+++..|
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y  182 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVM  182 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHH
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhh
Confidence            99999999999998742  0156788999999999999999999999999999965  6999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++........        ......... .+.+++.+|+|+|++++
T Consensus       183 ~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~-~p~~r~~~pedvA~~v~  253 (296)
T 3k31_A          183 GVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFH--------YILTWNKYN-SPLRRNTTLDDVGGAAL  253 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHH--------HHHHHHHHH-STTSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchH--------HHHHHHHhc-CCCCCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999865432111        112222223 34489999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCccccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ||+++...++||++|.+|||++..
T Consensus       254 fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          254 YLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHcCCccCCccCCEEEECCCcccc
Confidence            999999999999999999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-48  Score=326.12  Aligned_cols=244  Identities=30%  Similarity=0.404  Sum_probs=219.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++..+++.+.+.. ..++.++.+|++|+++++++++++.+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999999888877776643 35788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|+++|+
T Consensus        82 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (247)
T 3lyl_A           82 AIDILVNNAGITRD--NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA  159 (247)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence            99999999999865  7788999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      |++.|++.++.|++++||++++|+||+++|++.....+.          ....... ..+.+++.+|+|+|+++++|+++
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~dva~~i~~l~s~  228 (247)
T 3lyl_A          160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDE----------QKSFIAT-KIPSGQIGEPKDIAAAVAFLASE  228 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHH----------HHHHHHT-TSTTCCCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHH----------HHHHHhh-cCCCCCCcCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999997654321          1112222 23448999999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|++|.+|||+.+
T Consensus       229 ~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          229 EAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             CcCCccCCEEEECCCEec
Confidence            999999999999999875

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=4.2e-48  Score=327.82  Aligned_cols=247  Identities=30%  Similarity=0.422  Sum_probs=204.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+++||++|||||++|||+++|++|+++|++|+++ .|+.+..+...+++.. ..++.++.+|++|+++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998 5566666666666543 35788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccch
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYT  169 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~  169 (280)
                      .++++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+. .+.++...|+
T Consensus        83 ~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~  159 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIAR-KTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYA  159 (259)
T ss_dssp             HHCSEEEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHH
T ss_pred             HhCCCCEEEECCCccCCC-CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHH
Confidence            999999999999987332 78899999999999999999999999999999976  6899999999988 6788899999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|+++|++.++.|+++. |+||+|+||+++|++.......+         ........ .+.+++.+|+|+|++++|
T Consensus       160 asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~---------~~~~~~~~-~p~~r~~~pedva~~v~~  228 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPE---------VRERVAGA-TSLKREGSSEDVAGLVAF  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC--------------------------------CCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChH---------HHHHHHhc-CCCCCCcCHHHHHHHHHH
Confidence            99999999999999999987 99999999999999976543211         11111122 234889999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      |+++...++||++|.+|||++...
T Consensus       229 L~s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          229 LASDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             HHSGGGTTCCSCEEEESBCSSBC-
T ss_pred             HcCccccCccCCEEEECCCcCCCC
Confidence            999999999999999999998754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.9e-48  Score=337.19  Aligned_cols=256  Identities=31%  Similarity=0.465  Sum_probs=213.5

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhCC-CCCeEEEecCCCCH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLGG-EPDTFFCHCDVTKE   78 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~~-~~~~~~~~~D~~~~   78 (280)
                      .+.+++||++|||||++|||+++|+.|+++|++|++++|+            .+.+++..+.+.. ..++.++.+|++|+
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            3557899999999999999999999999999999999876            4455555444432 35788999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEcccc
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVA  157 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~  157 (280)
                      ++++++++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQ--GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH
Confidence            99999999999999999999999999865  7888999999999999999999999999999998765 68999999999


Q ss_pred             ccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCC------CchhhhhhhhhhHHHHHhhhc
Q 023613          158 GAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL------PEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       158 ~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  231 (280)
                      +..+.++...|++||+|++.|++.++.|++++||+||+|+||+++|++.....      +......  ............
T Consensus       198 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  275 (317)
T 3oec_A          198 GLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPT--REDAAELFSQLT  275 (317)
T ss_dssp             GSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCC--HHHHHHHHTTTC
T ss_pred             hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccc--hhHHHHHHhhhc
Confidence            99999999999999999999999999999999999999999999999864210      0000000  000111111111


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       232 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++++|+|||++++||+++.++++||++|.+|||++.
T Consensus       276 ~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          276 LLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             SSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            1126889999999999999999999999999999999875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-47  Score=326.92  Aligned_cols=241  Identities=30%  Similarity=0.452  Sum_probs=210.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++||++|||||++|||+++|++|+++|++|++++++ .+..+++.+++.. ..++.++.+|++|+++++++++++.+.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998665 4556665555532 357889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-CCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-~~~~~~Y~~  170 (280)
                      ++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+ .++...|++
T Consensus       107 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~a  182 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHS--APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSA  182 (271)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHH
T ss_pred             cCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHH
Confidence            9999999999999865  78899999999999999999999999999999954  689999999877665 688999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+++|++.++.|++++||+||+|+||+++|++........           ..... ..+.+++.+|+|+|++++||
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~-----------~~~~~-~~~~~r~~~pedvA~~v~fL  250 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA-----------EAQRE-RIATGSYGEPQDIAGLVAWL  250 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH-----------HHHHH-TCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH-----------HHHHh-cCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999975432111           11112 23448999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccc
Q 023613          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++...++||++|.+|||++
T Consensus       251 ~s~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          251 AGPQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hCcccCCccCCEEEeCcCcc
Confidence            99999999999999999975

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=4.3e-48  Score=326.49  Aligned_cols=237  Identities=23%  Similarity=0.359  Sum_probs=211.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCC--CCHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDV--TKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~--~~~~~~~~~~~~~~   89 (280)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+..  ..++.++.+|+  +++++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            458999999999999999999999999999999999999888877666542  23678889999  99999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|+
T Consensus        88 ~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDV-CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA  166 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCC-SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhH
Confidence            9999999999999986432 678899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|+++|++.++.|++++ |+||+|+||+++|++.....+...                   ..++.+|+|+|++++|
T Consensus       167 asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~~-------------------~~~~~~p~dva~~~~~  226 (252)
T 3f1l_A          167 ASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTED-------------------PQKLKTPADIMPLYLW  226 (252)
T ss_dssp             HHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTCC-------------------GGGSBCTGGGHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCccc-------------------hhccCCHHHHHHHHHH
Confidence            99999999999999999987 999999999999998654333211                   0356789999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++..+++||++|.+|||+..
T Consensus       227 L~s~~~~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          227 LMGDDSRRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             HHSGGGTTCCSCEEESSCC---
T ss_pred             HcCccccCCCCCEEEeCCCcCC
Confidence            9999999999999999999864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=5e-48  Score=328.79  Aligned_cols=253  Identities=23%  Similarity=0.324  Sum_probs=214.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      |.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   ...+.++.+|++++++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            44578999999999999999999999999999999999999888777666532   3467788999999999877654  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                        +++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|
T Consensus        82 --~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  157 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFEP--VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHY  157 (267)
T ss_dssp             --HCCCCSEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHH
T ss_pred             --hcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHH
Confidence              57899999999999865  78889999999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCC----chhhhhhhhhhHHHHHhhh--ccCCCCCCCHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP----EEERTEDAMVGFRNFVARN--ANMQGTELTAND  242 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d  242 (280)
                      ++||+|+++|++.++.|++++||+||+|+||+++|++......    ......  ......+....  ..+.+++.+|+|
T Consensus       158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~~ped  235 (267)
T 3t4x_A          158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTI--EEAEKRFMKENRPTSIIQRLIRPEE  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCH--HHHHHHHHHHHCTTCSSCSCBCTHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCH--HHHHHHHhhccCCcccccCccCHHH
Confidence            9999999999999999999999999999999999997653211    110000  01112222222  224589999999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|++++||+++.+.++||++|.+|||+..+
T Consensus       236 vA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          236 IAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            999999999999999999999999998764

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.7e-48  Score=330.75  Aligned_cols=244  Identities=25%  Similarity=0.377  Sum_probs=206.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC---cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ---DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~---~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++|.   .+.++++.+++.. ..++.++.+|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998764   4455566666543 357889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.  +.|+||++||..+..+.++...|
T Consensus        86 ~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~Y  161 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYSTY  161 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCS--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC-
T ss_pred             HHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCchh
Confidence            9999999999999999865  7888999999999999999999999999999994  36899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++||+|+++|++.++.|++++||+||+|+||+++|++.........         ..... ...+.+++.+|+|+|++++
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---------~~~~~-~~~~~~r~~~pedvA~~v~  231 (262)
T 3ksu_A          162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES---------TAFHK-SQAMGNQLTKIEDIAPIIK  231 (262)
T ss_dssp             ----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------------CCCCSCCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH---------HHHHH-hcCcccCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999765432211         11111 2234489999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ||+++ ..++||++|.+|||+..
T Consensus       232 ~L~s~-~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          232 FLTTD-GWWINGQTIFANGGYTT  253 (262)
T ss_dssp             HHHTT-TTTCCSCEEEESTTCCC
T ss_pred             HHcCC-CCCccCCEEEECCCccC
Confidence            99998 88999999999999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=5.3e-48  Score=328.91  Aligned_cols=251  Identities=33%  Similarity=0.460  Sum_probs=212.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+..         .....++.+|++|+++++++++++.+.+
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------VNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3468899999999999999999999999999999999987643         1256678999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||
T Consensus        80 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (269)
T 3vtz_A           80 GRIDILVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSK  157 (269)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHH
Confidence            999999999998765  788899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh-hhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      +|+++|++.++.|+++ ||+||+|+||+++|++.......... .............. ..+.+++.+|+|+|++++||+
T Consensus       158 aa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~pedvA~~v~~L~  235 (269)
T 3vtz_A          158 HALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR-QHPMGRIGRPEEVAEVVAFLA  235 (269)
T ss_dssp             HHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH-HSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999998 89999999999999986543211000 00000111111122 234589999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ++...+++|++|.+|||++...+..
T Consensus       236 s~~~~~itG~~i~vdGG~~~~~~~~  260 (269)
T 3vtz_A          236 SDRSSFITGACLTVDGGLLSKLPIS  260 (269)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBCCCC
T ss_pred             CCccCCCcCcEEEECCCccccCCCC
Confidence            9999999999999999998876544

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.5e-47  Score=328.16  Aligned_cols=254  Identities=28%  Similarity=0.396  Sum_probs=210.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+.  .++.++.+|++++++++++++++.+.+++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG--GNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999999999988888776653  57888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCC----CCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           95 LDIMVNNAGISGAPCPDI----READLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +|+||||||+.... ..+    .+.+.++|++.+++|+.+++.++++++|.|.++ .|+||++||..+..+.++...|++
T Consensus        80 iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  157 (281)
T 3zv4_A           80 IDTLIPNAGIWDYS-TALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTA  157 (281)
T ss_dssp             CCEEECCCCCCCTT-CCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHHHH
T ss_pred             CCEEEECCCcCccc-cccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchhHH
Confidence            99999999986432 222    244567899999999999999999999999765 489999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|+++|++.++.|++++ |+||+|+||+++|++......................... .+.+++.+|+|+|++++||
T Consensus       158 sKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~pedvA~~v~fL  235 (281)
T 3zv4_A          158 TKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV-LPIGRMPALEEYTGAYVFF  235 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT-CTTSSCCCGGGGSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc-CCCCCCCCHHHHHHHHHHh
Confidence            9999999999999999987 9999999999999987543221110000000112222233 3459999999999999999


Q ss_pred             cC-CCCCCeeecEEEeCCccccccc
Q 023613          251 AS-DEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       251 ~s-~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ++ +...++||++|.+|||++....
T Consensus       236 ~s~~~~~~itG~~i~vdGG~~~~~~  260 (281)
T 3zv4_A          236 ATRGDSLPATGALLNYDGGMGVRGF  260 (281)
T ss_dssp             HSTTTSTTCSSCEEEESSSGGGCCS
T ss_pred             hcccccccccCcEEEECCCCccccc
Confidence            99 7888999999999999987654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=8.1e-48  Score=325.37  Aligned_cols=246  Identities=26%  Similarity=0.392  Sum_probs=213.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ...+++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+.+.. ..++.++.+|+++.++++++++++.+
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999887 666666555555432 35788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++
T Consensus        88 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRD--VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYST  165 (256)
T ss_dssp             HTCCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHH
T ss_pred             hcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHH
Confidence            99999999999999865  7888999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+++|++.++.|++++||++++|+||+++|++.....+.          ........ .+.+++.+|+|+|+++++|
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~dva~~~~~l  234 (256)
T 3ezl_A          166 AKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD----------VLEKIVAT-IPVRRLGSPDEIGSIVAWL  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH----------HHHHHHHH-STTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHH----------HHHHHHhc-CCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999997664322          11111222 2348899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|+++.+|||+..
T Consensus       235 ~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          235 ASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCC
T ss_pred             hCCcccCCcCcEEEECCCEeC
Confidence            999999999999999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.5e-48  Score=331.51  Aligned_cols=252  Identities=33%  Similarity=0.435  Sum_probs=206.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhCC-CCCeEEEecCCCCHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLGG-EPDTFFCHCDVTKEE   79 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~~-~~~~~~~~~D~~~~~   79 (280)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+.. ..++.++.+|++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            456899999999999999999999999999999999987            4555554444432 357889999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccc
Q 023613           80 DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAG  158 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~  158 (280)
                      +++++++++.+.++++|+||||||+...  .    .+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~--~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPM--S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCC--S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC--C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            9999999999999999999999998643  2    25889999999999999999999999998764 689999999999


Q ss_pred             cccC----CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCC
Q 023613          159 AIGG----LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       159 ~~~~----~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                      ..+.    ++...|++||+|+++|++.++.|++++||+||+|+||+++|++...........................+ 
T Consensus       162 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  240 (278)
T 3sx2_A          162 LAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-  240 (278)
T ss_dssp             TSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-
T ss_pred             cCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-
Confidence            8876    67788999999999999999999999999999999999999986543211100000000000000111223 


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       235 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++.+|+|+|++++||+++..+++||++|.+|||++.
T Consensus       241 ~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          241 VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            6889999999999999999999999999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=4.5e-47  Score=319.66  Aligned_cols=245  Identities=32%  Similarity=0.437  Sum_probs=205.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+. +.+++..+..  ..++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            458899999999999999999999999999999999988 6665533332  2468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|
T Consensus        81 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (249)
T 2ew8_A           81 GRCDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK  158 (249)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHH
Confidence            999999999998754  678899999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.|++.++.|++++||+||+|+||+++|++........ ..    .....+.    .+.+++.+|+|+|+++++|++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~----~~~~~~~----~~~~~~~~p~dva~~~~~l~s  229 (249)
T 2ew8_A          159 AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA-MF----DVLPNML----QAIPRLQVPLDLTGAAAFLAS  229 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------CTT----SSSCSCCCTHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccc-hh----hHHHHhh----CccCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999865111100 00    0001110    344889999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||+..
T Consensus       230 ~~~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          230 DDASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             GGGTTCCSCEEEESSSCCC
T ss_pred             cccCCCCCcEEEECCCccC
Confidence            8889999999999999764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-47  Score=323.71  Aligned_cols=250  Identities=32%  Similarity=0.474  Sum_probs=214.7

Q ss_pred             CccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh-C-CCCCeEEEecCCCCHHHHHHHHHH
Q 023613           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-G-GEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ++...++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+ . ...++.++.+|+++++++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            33455789999999999999999999999999999999999988777766555 1 124678899999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc-ccccCCCCc
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA-GAIGGLGPH  166 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~-~~~~~~~~~  166 (280)
                      +.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||.. +..+.++..
T Consensus        93 ~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  170 (267)
T 1vl8_A           93 VKEKFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNIS  170 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCH
T ss_pred             HHHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCCh
Confidence            99999999999999998765  678899999999999999999999999999999887789999999998 888888899


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|+++|++++.|++.++.|++++||+||+|+||+++|++........       .....+ ... .+.+++.+|+|+|++
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~-~~~-~p~~~~~~p~dvA~~  241 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP-------EKLDYM-LKR-IPLGRTGVPEDLKGV  241 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH-------HHHHHH-HHT-CTTSSCBCGGGGHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccCh-------HHHHHH-Hhh-CCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999999864321100       001111 122 234889999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++|+++...+++|+.+.+|||+.
T Consensus       242 v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          242 AVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHcCccccCCcCCeEEECCCCC
Confidence            999999988999999999999975

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=4.7e-47  Score=326.60  Aligned_cols=246  Identities=26%  Similarity=0.386  Sum_probs=212.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+.. +...+.+.. ..++.++.+|++|+++++++++++.+
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999987643 333333332 35788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+  .++||++||..+..+.++...|++
T Consensus       122 ~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  198 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQ-QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSA  198 (291)
T ss_dssp             HHSSCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHH
Confidence            999999999999987532 67888999999999999999999999999999954  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|+++|++.++.|++++||+||+|+||+++|++.......+.        . .... ...+.+++.+|+|+|++++||
T Consensus       199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~--------~-~~~~-~~~p~~r~~~p~dvA~~v~~L  268 (291)
T 3ijr_A          199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKK--------V-SQFG-SNVPMQRPGQPYELAPAYVYL  268 (291)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHH--------H-HHTT-TTSTTSSCBCGGGTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHH--------H-HHHH-ccCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998654432211        1 1111 223458999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|++|.+|||++.
T Consensus       269 ~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCCC
T ss_pred             hCCccCCCcCCEEEECCCccc
Confidence            999999999999999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-47  Score=323.64  Aligned_cols=252  Identities=25%  Similarity=0.369  Sum_probs=211.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++++++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            458899999999999999999999999999999999998877776665532 3568889999999999999999999999


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 -GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|+++
T Consensus        97 ~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  174 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  174 (273)
T ss_dssp             TSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence             899999999998754  77889999999999999999999999999999987777999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.|++.++.|++++||+||+|+||+++|++.....+......   .....+ ... .+.+++.+|+|+|+++++|+
T Consensus       175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~-~~~-~p~~r~~~p~dvA~~v~~l~  249 (273)
T 1ae1_A          175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQK---EEIDNF-IVK-TPMGRAGKPQEVSALIAFLC  249 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CH---HHHHHH-HHH-STTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcH---HHHHHH-Hhc-CCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998654322100000   001111 122 34488999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++...+++|+++.+|||+...
T Consensus       250 s~~~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          250 FPAASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CccccCcCCCEEEECCCcccC
Confidence            998899999999999998753

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=2.2e-47  Score=325.09  Aligned_cols=245  Identities=27%  Similarity=0.408  Sum_probs=212.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++ |+.+..+...+.+.. ..++.++.+|++|.++++++++++.+.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            37899999999999999999999999999999998 555555555544432 3678899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+++..|++||
T Consensus       102 g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  179 (269)
T 3gk3_A          102 GKVDVLINNAGITRD--ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAK  179 (269)
T ss_dssp             SCCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCcCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHH
Confidence            999999999999865  778899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|+++|++.++.|++++||+||+|+||+++|++.....+...         ..... ...+.+++.+|+|+|+++++|++
T Consensus       180 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---------~~~~~-~~~~~~~~~~p~dvA~~v~~L~s  249 (269)
T 3gk3_A          180 AGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVL---------EAKIL-PQIPVGRLGRPDEVAALIAFLCS  249 (269)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------------CCSG-GGCTTSSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHH---------HHHhh-hcCCcCCccCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999765432211         00111 12344889999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|++|.+|||+..
T Consensus       250 ~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          250 DDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             TTCTTCCSCEEEESTTSCC
T ss_pred             CCcCCeeCcEEEECCCEeC
Confidence            9999999999999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=2.5e-47  Score=320.61  Aligned_cols=242  Identities=35%  Similarity=0.535  Sum_probs=212.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++|++|||||++|||+++|++|+++|++|++++| +++.+++..+++.. ..++.++.+|++|+++++++++++.+.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            67999999999999999999999999999999999 77777666555532 34688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|+
T Consensus        82 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  159 (246)
T 2uvd_A           82 QVDILVNNAGVTKD--NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKA  159 (246)
T ss_dssp             CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHH
Confidence            99999999998754  6788899999999999999999999999999998777799999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.|++.++.|++++||+||+|+||+++|++.....+.          ........ .+.+++.+|+|+|+++++|+++
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~-~p~~~~~~~~dvA~~~~~l~s~  228 (246)
T 2uvd_A          160 GVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN----------IKAEMLKL-IPAAQFGEAQDIANAVTFFASD  228 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT----------HHHHHHHT-CTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH----------HHHHHHhc-CCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999986542211          01111122 2347899999999999999998


Q ss_pred             CCCCeeecEEEeCCccc
Q 023613          254 EARYISGTNLMVDGGFT  270 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~  270 (280)
                      ...+++|+.+.+|||+.
T Consensus       229 ~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          229 QSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             hhcCCCCCEEEECcCcc
Confidence            88999999999999975

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=3.1e-47  Score=328.19  Aligned_cols=246  Identities=26%  Similarity=0.355  Sum_probs=210.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc--chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.  +..+.+.+.+.. ..++.++.+|++|+++++++++++.+
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999873  334444443322 35788899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++...|++
T Consensus       125 ~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~a  201 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAI-PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAA  201 (294)
T ss_dssp             HHTCCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHH
Confidence            999999999999986532 67889999999999999999999999999999954  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|+++|++.++.|++++||+||+|+||+++|++...........        .... ...+.+++.+|+|+|++++||
T Consensus       202 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~--------~~~~-~~~p~~r~~~p~dvA~~v~~L  272 (294)
T 3r3s_A          202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKI--------PQFG-QQTPMKRAGQPAELAPVYVYL  272 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGS--------TTTT-TTSTTSSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHH--------HHHH-hcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999854322211110        1111 123458999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...++||++|.+|||+..
T Consensus       273 ~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          273 ASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             hCccccCCCCCEEEECCCccC
Confidence            999999999999999999875

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.7e-47  Score=326.19  Aligned_cols=246  Identities=27%  Similarity=0.399  Sum_probs=211.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+ ++..+.+.+.+.. ..++.++.+|++++++++++++++.+
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            446899999999999999999999999999999999995 4444544444432 35788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++
T Consensus       104 ~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  181 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRD--KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSA  181 (271)
T ss_dssp             HHSSCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCcCCC--cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHH
Confidence            99999999999999865  7788999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|++.|++.++.|++++||+|++|+||+++|++.....+..          ...... ..+.+++.+|+|+|+++++|
T Consensus       182 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~-~~~~~~~~~p~dvA~~i~~l  250 (271)
T 4iin_A          182 SKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDEL----------KADYVK-NIPLNRLGSAKEVAEAVAFL  250 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------CGG-GCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHH----------HHHHHh-cCCcCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999976543211          111112 23348899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|+++.+|||+.+
T Consensus       251 ~s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          251 LSDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTSCC
T ss_pred             hCCCcCCCcCCEEEeCCCeeC
Confidence            999999999999999999864

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.2e-47  Score=324.54  Aligned_cols=246  Identities=27%  Similarity=0.331  Sum_probs=215.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....++.++.+|++|+++++++++++.+.++
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            45889999999999999999999999999999999999988887777775434788889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC----ceEEEEccccccccCCCCc-cc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK----GTIISICSVAGAIGGLGPH-AY  168 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~iv~isS~~~~~~~~~~~-~Y  168 (280)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.    ++||++||..+..+.++.. .|
T Consensus       105 ~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y  182 (276)
T 2b4q_A          105 RLDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAY  182 (276)
T ss_dssp             CCSEEEECCCCCCC--CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCcccc
Confidence            99999999998765  67889999999999999999999999999999976655    8999999999998888888 99


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|++++.|++.++.|++++||+||+|+||+++|++.....+.   .      ...+......+.+++.+|+|+|++++
T Consensus       183 ~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~------~~~~~~~~~~p~~r~~~p~dvA~~v~  253 (276)
T 2b4q_A          183 GPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND---P------QALEADSASIPMGRWGRPEEMAALAI  253 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC---H------HHHHHHHHTSTTSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh---H------HHHHHhhcCCCCCCcCCHHHHHHHHH
Confidence            99999999999999999999999999999999999985432110   0      01111101234488999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCccc
Q 023613          249 FLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+++...+++|+++.+|||+.
T Consensus       254 ~l~s~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          254 SLAGTAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhCccccCCCCCEEEeCCCcc
Confidence            9999888899999999999975

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-46  Score=316.36  Aligned_cols=239  Identities=33%  Similarity=0.496  Sum_probs=211.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.    +.++.+|++|+++++++++++.+.+++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG----AHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT----CEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999999887777665442    678899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||.. ..+.+++..|+++|++
T Consensus        78 id~lvn~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a  154 (245)
T 1uls_A           78 LDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAG  154 (245)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHH
Confidence            9999999998754  778899999999999999999999999999999887789999999998 8888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++.|++.++.|++++||+||+|+||+++|++.... +.. .       ...+ ... .+.+++.+|+|+|+++++|+++.
T Consensus       155 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~-~-------~~~~-~~~-~p~~~~~~~~dvA~~v~~l~s~~  223 (245)
T 1uls_A          155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-PEK-V-------REKA-IAA-TPLGRAGKPLEVAYAALFLLSDE  223 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-CHH-H-------HHHH-HHT-CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-CHH-H-------HHHH-Hhh-CCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999986542 111 0       1111 122 23488999999999999999998


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++|+.+.+|||+..
T Consensus       224 ~~~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          224 SSFITGQVLFVDGGRTI  240 (245)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hcCCcCCEEEECCCccc
Confidence            89999999999999864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=4.2e-47  Score=321.81  Aligned_cols=253  Identities=31%  Similarity=0.462  Sum_probs=208.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+. ++++.+.+..  ..++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999999999999877 6666555532  2468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||
T Consensus        82 g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  159 (260)
T 1x1t_A           82 GRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHH
Confidence            999999999998754  678889999999999999999999999999999877779999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh--hhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ++++.|++.++.|++++||+||+|+||+++|++.....+....  ..........+.... .+.+++.+|+|+|+++++|
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~p~dva~~~~~l  238 (260)
T 1x1t_A          160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK-QPSLQFVTPEQLGGTAVFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH-CTTCCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhcc-CCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999986643221000  000000011110112 2448899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++...+++|+++.+|||+..
T Consensus       239 ~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          239 ASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hChhhcCCCCCEEEECCCccC
Confidence            998889999999999999763

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-47  Score=322.80  Aligned_cols=252  Identities=33%  Similarity=0.519  Sum_probs=214.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   ..++.++.+|++++++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998877766555521   35788899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++
T Consensus        89 ~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  167 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA  167 (267)
T ss_dssp             HHSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             HcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHH
Confidence            999999999999986431 4678889999999999999999999999999998777899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccC--CCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH--LPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +|++++.|++.++.|++++||+||+|+||+++|++....  ........   .....+ ... .+.+++.+|+|+|++++
T Consensus       168 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~-~~~-~p~~r~~~~~dvA~~v~  242 (267)
T 1iy8_A          168 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPR---KAAEEF-IQV-NPSKRYGEAPEIAAVVA  242 (267)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHH---HHHHHH-HTT-CTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhh---hHHHHH-hcc-CCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999986532  00000000   000011 122 34488999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+++...+++|+.+.+|||+..
T Consensus       243 ~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          243 FLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHcCccccCCCCCEEEECCCccc
Confidence            99999889999999999999764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-47  Score=322.92  Aligned_cols=251  Identities=30%  Similarity=0.462  Sum_probs=214.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999998888777666643 3478889999999999999999999999


Q ss_pred             CCccEEEECCCCC-CCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|+||||||+. ..  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|+++
T Consensus        83 g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  160 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAF--APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTS  160 (262)
T ss_dssp             SCCCEEEECCCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHH
Confidence            9999999999986 33  67888999999999999999999999999999987777999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCch-------hhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE-------ERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      |++++.|++.++.|++++||+||+|+||+++|++.....+..       .....+ ......... ..+.+++.+|+|+|
T Consensus       161 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~p~~r~~~p~dvA  238 (262)
T 1zem_A          161 KGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDP-KVVAQQMIG-SVPMRRYGDINEIP  238 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSH-HHHHHHHHH-TSTTSSCBCGGGSH
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCH-HHHHHHHHh-cCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999865420000       000000 001111112 23448999999999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCCc
Q 023613          245 NAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      ++++||+++...+++|+.+.+|||
T Consensus       239 ~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          239 GVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHcCchhcCcCCcEEecCCC
Confidence            999999999899999999999998

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.5e-47  Score=325.59  Aligned_cols=244  Identities=29%  Similarity=0.386  Sum_probs=209.0

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.+..+          ....+.+|+++.++++++++++.+.
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------~~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------ADLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------CSEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------hhhccCcCCCCHHHHHHHHHHHHHh
Confidence            356789999999999999999999999999999999999876432          1234579999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus        92 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  169 (266)
T 3uxy_A           92 LGRLDIVVNNAGVISR--GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLT  169 (266)
T ss_dssp             HSCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHH
Confidence            9999999999999865  78889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|++.|++.++.|++++||+||+|+||+++|++............   ......... ..+.+++.+|+|+|+++++|+
T Consensus       170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~-~~p~~r~~~pedvA~~v~~L~  245 (266)
T 3uxy_A          170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDP---DRAVAELGR-TVPLGRIAEPEDIADVVLFLA  245 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCH---HHHHHHHHT-TSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccc---hHHHHHHHh-cCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999998654322111000   001112222 234589999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.|.+|||+..
T Consensus       246 s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          246 SDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             SGGGTTCCSCEEEESTTCCC
T ss_pred             CchhcCCcCCEEEECcCEeC
Confidence            99999999999999999864

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=8.9e-47  Score=320.32  Aligned_cols=255  Identities=26%  Similarity=0.323  Sum_probs=215.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  ..++.++.+|++++++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999998877776665532  246888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++
T Consensus        83 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (263)
T 3ai3_A           83 FGGADILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT  160 (263)
T ss_dssp             HSSCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence            9999999999998764  77889999999999999999999999999999987777999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh--hhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED--AMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      |++++.|++.++.|++++||+||+|+||+++|++.....+.......  .......+ .....+.+++.+|+|+|+++++
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~dvA~~~~~  239 (263)
T 3ai3_A          161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSV-ADEHAPIKRFASPEELANFFVF  239 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHH-HHHHCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHH-HhcCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999986532110000000  00001111 1110344889999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+.+.+|||+..
T Consensus       240 l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          240 LCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HTSTTCTTCCSCEEEESTTCCC
T ss_pred             HcCccccCCCCcEEEECCCccc
Confidence            9999889999999999999764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=9.8e-47  Score=320.63  Aligned_cols=257  Identities=25%  Similarity=0.418  Sum_probs=218.0

Q ss_pred             CCCCCCCCCC--ccccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCC--CCCeEEEec
Q 023613            1 MSNSNSTDSS--PAVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGG--EPDTFFCHC   73 (280)
Q Consensus         1 m~~~~~~~~~--~~~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~   73 (280)
                      |+....+...  +.+.++++|++|||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++..  ..++.++.|
T Consensus         1 m~~~~~~~~~~~~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   80 (267)
T 3gdg_A            1 MPGQQATKHESLLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKC   80 (267)
T ss_dssp             CCCCCCCSCSSHHHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBC
T ss_pred             CCcccCCCCcccccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEec
Confidence            5554444322  23457899999999999  9999999999999999999998876544 444444321  357888999


Q ss_pred             CCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEE
Q 023613           74 DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISI  153 (280)
Q Consensus        74 D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~i  153 (280)
                      |++++++++++++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++
T Consensus        81 Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~i  158 (267)
T 3gdg_A           81 QVDSYESCEKLVKDVVADFGQIDAFIANAGATAD--SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVIT  158 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCC--SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEE
Confidence            9999999999999999999999999999999865  67889999999999999999999999999999988888999999


Q ss_pred             ccccccccC--CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc
Q 023613          154 CSVAGAIGG--LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       154 sS~~~~~~~--~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                      ||..+..+.  ++...|++||+|++.|++.++.|++++ |+||+|+||+++|++.....+.          ....... .
T Consensus       159 sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~-~  226 (267)
T 3gdg_A          159 ASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKE----------TQQLWHS-M  226 (267)
T ss_dssp             CCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHH----------HHHHHHT-T
T ss_pred             ccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHH----------HHHHHHh-c
Confidence            999988776  577899999999999999999999987 9999999999999997654221          1111122 2


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       232 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .+.+++.+|+|+|+++++|+++...++||+.|.+|||++.
T Consensus       227 ~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          227 IPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             STTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHhHhheeecCccccccCCEEEECCceec
Confidence            3458999999999999999999999999999999999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-47  Score=326.94  Aligned_cols=253  Identities=28%  Similarity=0.402  Sum_probs=207.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------------cchHHHHHHHhC-CCCCeEEEecCCCCH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ------------DNLGQQVCQSLG-GEPDTFFCHCDVTKE   78 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~------------~~~~~~~~~~~~-~~~~~~~~~~D~~~~   78 (280)
                      .|.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++....+. ...++.++.+|++++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            3557999999999999999999999999999999999987            444454444443 235788999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      ++++++++++.+.++++|+||||||+...  .  .+.+.++|++.+++|+.+++.++++++|+|  .+.++||++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~  157 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPL--G--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAG  157 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC--C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcc--c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchh
Confidence            99999999999999999999999998754  3  347899999999999999999999999999  44689999999988


Q ss_pred             cccC-----------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh-----hhhhhhh
Q 023613          159 AIGG-----------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-----TEDAMVG  222 (280)
Q Consensus       159 ~~~~-----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~-----~~~~~~~  222 (280)
                      ..+.           ++...|+++|+++++|++.++.|++++||+||+|+||+++|++..........     .......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T 3pxx_A          158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA  237 (287)
T ss_dssp             HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence            7765           66789999999999999999999999999999999999999997532100000     0000000


Q ss_pred             HHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          223 FRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+......+ +++.+|+|+|++++||+++.++++||++|.+|||++.
T Consensus       238 ~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          238 LLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             HHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            11111112223 7899999999999999999999999999999999875

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.1e-46  Score=324.34  Aligned_cols=245  Identities=25%  Similarity=0.324  Sum_probs=211.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhC--CCCCeEEEecCCCCHH----------
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLG--GEPDTFFCHCDVTKEE----------   79 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~----------   79 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++ |+.+.+++..+++.  ...++.++.+|+++++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            4568899999999999999999999999999999999 99888777766653  2357889999999999          


Q ss_pred             -------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCC--------------HHHHHHHhhhhhHhHHHHHHHH
Q 023613           80 -------DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD--------------LSEFEKVFDINVKGVFHGMKHA  138 (280)
Q Consensus        80 -------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~  138 (280)
                             +++++++++.+.++++|+||||||+...  .++.+.+              .++|++.+++|+.+++.+++++
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                   9999999999999999999999998765  6777888              9999999999999999999999


Q ss_pred             HHhcccCC------CceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc
Q 023613          139 ARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE  212 (280)
Q Consensus       139 ~~~l~~~~------~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~  212 (280)
                      +|.|.+++      .++||++||..+..+.++...|++||+++++|++.++.|++++||+||+|+||+++|++ .  .+ 
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~-  237 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP-  237 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC-
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC-
Confidence            99998776      69999999999999999999999999999999999999999999999999999999999 4  32 


Q ss_pred             hhhhhhhhhhHHHHHhhhccCCC-CCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          213 EERTEDAMVGFRNFVARNANMQG-TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ...       ...+ .... +.+ ++.+|+|+|+++++|+++...+++|+++.+|||+...
T Consensus       238 ~~~-------~~~~-~~~~-p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          238 PAV-------WEGH-RSKV-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             HHH-------HHHH-HTTC-TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHH-------HHHH-HhhC-CCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence            110       1111 2222 336 8999999999999999998899999999999998753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-47  Score=328.04  Aligned_cols=251  Identities=24%  Similarity=0.349  Sum_probs=218.1

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~---~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~   85 (280)
                      ++.+++||++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++..   ..++.++.||++|++++++++
T Consensus        27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~  106 (287)
T 3rku_A           27 AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFI  106 (287)
T ss_dssp             HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHH
T ss_pred             chhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            35578999999999999999999999999998   999999999888887776632   357889999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC
Q 023613           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        86 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  165 (280)
                      +++.+.++++|+||||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++.
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~  185 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGS-DRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTG  185 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCC-CCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHhcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCC
Confidence            99999999999999999987532 67889999999999999999999999999999988888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|++||+|+++|++.++.|++++||+||+|+||+++|++...........      .......     ....+|+|||+
T Consensus       186 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~------~~~~~~~-----~~p~~pedvA~  254 (287)
T 3rku_A          186 SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQ------AKNVYKD-----TTPLMADDVAD  254 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHH------HHHHHTT-----SCCEEHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHH------HHHhhcc-----cCCCCHHHHHH
Confidence            999999999999999999999999999999999999999864332211110      1111111     23458999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCccccccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      +++||+++...+++|+.+.+|||......
T Consensus       255 ~v~~l~s~~~~~i~g~~i~v~~g~~~p~~  283 (287)
T 3rku_A          255 LIVYATSRKQNTVIADTLIFPTNQASPHH  283 (287)
T ss_dssp             HHHHHHTSCTTEEEEEEEEEETTEEETTE
T ss_pred             HHHHHhCCCCCeEecceEEeeCCCCCCcc
Confidence            99999999999999999999999876433

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.7e-47  Score=323.63  Aligned_cols=243  Identities=29%  Similarity=0.417  Sum_probs=195.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+...   +.+.  .++.++.+|++|+++++++++.+.+ 
T Consensus         3 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            3 GSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADLG--DRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHTC--TTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---HhcC--CceEEEECCCCCHHHHHHHHHHHHH-
Confidence            455789999999999999999999999999999999999655432   3332  5788999999999999999998877 


Q ss_pred             cCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhccc--------CCCceEEEEcccccccc
Q 023613           92 FGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIP--------QTKGTIISICSVAGAIG  161 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--------~~~~~iv~isS~~~~~~  161 (280)
                      ++++|++|||||+....  ..+..+.+.++|++.+++|+.+++.++++++|.|.+        +..|+||++||..+..+
T Consensus        77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  156 (257)
T 3tl3_A           77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG  156 (257)
T ss_dssp             HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC
T ss_pred             hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC
Confidence            89999999999986431  012235889999999999999999999999999987        56789999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHH
Q 023613          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      .+++..|++||+|+++|++.++.|++++||+||+|+||+++|++.....+.          .........++.+++.+|+
T Consensus       157 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~~~r~~~p~  226 (257)
T 3tl3_A          157 QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE----------ARASLGKQVPHPSRLGNPD  226 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHH----------HHHHHHHTSSSSCSCBCHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHH----------HHHHHHhcCCCCCCccCHH
Confidence            889999999999999999999999999999999999999999997653221          1111222233338899999


Q ss_pred             HHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          242 DVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       242 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+|+++++|+++  .++||++|.+|||+.+.
T Consensus       227 dva~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          227 EYGALAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHHHHHhcC--CCCCCCEEEECCCccCC
Confidence            999999999986  79999999999998764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=4.3e-46  Score=316.56  Aligned_cols=253  Identities=23%  Similarity=0.271  Sum_probs=216.5

Q ss_pred             ccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +.++++|++|||||+  +|||+++|++|+++|++|++++|++...+...+....  ..++.++.||++++++++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            357899999999999  6799999999999999999999987555444433322  236889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           89 VEKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      .+.++++|++|||||+....  ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++..
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  159 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYN  159 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTH
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcc
Confidence            99999999999999987520  167788999999999999999999999999999964  68999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+++|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~p~dva~~  230 (266)
T 3oig_A          160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNS--------ILKDIEER-APLRRTTTPEEVGDT  230 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHH--------HHHHHHHH-STTSSCCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHH--------HHHHHHhc-CCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999998766433211        11112222 234889999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccccccccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      +++|+++...+++|++|.+|||+......+
T Consensus       231 v~~l~s~~~~~~tG~~i~vdGG~~~~~~~~  260 (266)
T 3oig_A          231 AAFLFSDMSRGITGENLHVDSGFHITARLE  260 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGCCCCC
T ss_pred             HHHHcCCchhcCcCCEEEECCCeEEeeecC
Confidence            999999989999999999999999876544

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.9e-47  Score=326.98  Aligned_cols=240  Identities=23%  Similarity=0.287  Sum_probs=210.7

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-------hHHHHHHHhCC-CCCeEEEecCCCCHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-------LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-------~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~   83 (280)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+.+.. ..++.++.||+++++++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            345689999999999999999999999999999999999876       34444444432 3578899999999999999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-
Q 023613           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-  162 (280)
Q Consensus        84 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-  162 (280)
                      +++++.+.++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+. 
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  160 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINL--GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW  160 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC
Confidence            999999999999999999999865  78999999999999999999999999999999988888999999999998886 


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCC-eeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHH
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY-AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      ++...|++||+|+++|++.++.|++++||+||+|+|| .++|++.......                  ..+.+++.+|+
T Consensus       161 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~------------------~~~~~r~~~pe  222 (285)
T 3sc4_A          161 LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG------------------DEAMARSRKPE  222 (285)
T ss_dssp             SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS------------------CCCCTTCBCTH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc------------------cccccCCCCHH
Confidence            7889999999999999999999999999999999999 6899885432211                  11237889999


Q ss_pred             HHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          242 DVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       242 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+|+++++|+++.. +++|+.+.+|||+...
T Consensus       223 dvA~~~~~l~s~~~-~~tG~~i~~dgg~~~~  252 (285)
T 3sc4_A          223 VYADAAYVVLNKPS-SYTGNTLLCEDVLLES  252 (285)
T ss_dssp             HHHHHHHHHHTSCT-TCCSCEEEHHHHHHHH
T ss_pred             HHHHHHHHHhCCcc-cccceEEEEcCchhcc
Confidence            99999999999988 9999999999998753

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=6.2e-47  Score=320.77  Aligned_cols=253  Identities=21%  Similarity=0.270  Sum_probs=211.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   ..++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998877776665532   22688899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++ +|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++
T Consensus        83 ~~g-id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  159 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRP--GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNI  159 (260)
T ss_dssp             TTC-CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             hcC-CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHH
Confidence            988 9999999998754  6788899999999999999999999999999998777899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhH-HHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +|++++.+++.++.|++++||+||+|+||+++|++.................. ...... ..+.+++.+|+|+|+++++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~~~dva~~v~~  238 (260)
T 2z1n_A          160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMAS-RIPMGRVGKPEELASVVAF  238 (260)
T ss_dssp             HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------CCTTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHh-cCCCCCccCHHHHHHHHHH
Confidence            99999999999999999999999999999999998652211000000000000 111111 2244889999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCccc
Q 023613          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++...+++|+.+.+|||+.
T Consensus       239 l~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          239 LASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             HTSGGGTTCCSCEEEESTTTT
T ss_pred             HhCccccCCCCCEEEeCCCcc
Confidence            999988999999999999975

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.9e-46  Score=317.68  Aligned_cols=239  Identities=20%  Similarity=0.253  Sum_probs=199.3

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..++++++|++|||||++|||+++|++|+++|++|++++|+.+...+..+...    +.++.+|++++++++++++++.+
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG----AVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT----CEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC----CeEEECCCCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999877655544433    67889999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  .. .+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus        96 ~~g~iD~lv~nAg~~~~--~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  172 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLA--ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCA  172 (260)
T ss_dssp             HCSCCSEEEECCCCCCC--CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHH
T ss_pred             hcCCCCEEEECCCccCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHH
Confidence            99999999999998764  33 5678899999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|+++|++.++.|+++ +|+||+|+||+++|++.....            +...... ..+.+++.+|+|+|++++||
T Consensus       173 sKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~------------~~~~~~~-~~p~~r~~~~edva~~v~~L  238 (260)
T 3gem_A          173 TKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAA------------YRANALA-KSALGIEPGAEVIYQSLRYL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----------------------------CCSCCCCCTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHH------------HHHHHHh-cCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999998 699999999999998743210            1111112 23448899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +  ...+++|++|.+|||+...
T Consensus       239 ~--~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          239 L--DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             H--HCSSCCSCEEEESTTTTTC
T ss_pred             h--hCCCCCCCEEEECCCcccC
Confidence            9  4679999999999999764

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2e-46  Score=317.68  Aligned_cols=249  Identities=26%  Similarity=0.371  Sum_probs=216.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc-
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF-   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   92 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++++++++++++++.+.+ 
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   85 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999998877776665532 2468889999999999999999999999 


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||
T Consensus        86 g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (260)
T 2ae2_A           86 GKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  163 (260)
T ss_dssp             TCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHH
Confidence            899999999998754  678889999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.|++.++.|++++||+||+|+||+++|++...........    .....+ ... .+.+++.+|+|+|+++++|++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~-~~~-~~~~~~~~~~dvA~~v~~l~s  237 (260)
T 2ae2_A          164 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQK----ENLNKL-IDR-CALRRMGEPKELAAMVAFLCF  237 (260)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHH----HHHHHH-HHT-STTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhH----HHHHHH-Hhc-CCCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999865432211110    001111 122 344889999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||+..
T Consensus       238 ~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          238 PAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             ccccCCCCCEEEECCCccc
Confidence            8888999999999999764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.6e-46  Score=317.87  Aligned_cols=251  Identities=30%  Similarity=0.439  Sum_probs=212.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch--HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL--GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +|++|||||++|||+++|++|+++|++|++++|+.+.  +++..+.+.. ..++.++.+|++++++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999999999999877  6666666543 357888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++. ++||++||..+..+.++...|+++|+
T Consensus        82 iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (258)
T 3a28_C           82 FDVLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKF  159 (258)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHH
Confidence            9999999998754  67889999999999999999999999999999987666 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhh-hhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA-MVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++.|++.++.|++++||+||+|+||+++|++.............. ........... .+.+++.+|+|+|+++++|++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~p~dvA~~v~~l~s  238 (258)
T 3a28_C          160 AVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSS-IALGRPSVPEDVAGLVSFLAS  238 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTT-CTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhc-CCCCCccCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999865321000000000 00011111122 244889999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||+..
T Consensus       239 ~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          239 ENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             GGGTTCCSCEEEESSSSCC
T ss_pred             cccCCCCCCEEEECCCEec
Confidence            9889999999999999753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-46  Score=319.13  Aligned_cols=250  Identities=28%  Similarity=0.385  Sum_probs=207.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++.+|++|||||++|||+++|++|+++|++|++++|+.+. .+.+.+.+.. ..++.++.||++++++++++++++.+.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999776544 3334333332 257889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccc-cc-cccCCCCccch
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV-AG-AIGGLGPHAYT  169 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~-~~-~~~~~~~~~Y~  169 (280)
                      ++++|++|||||+......++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||. .. ..+.++...|+
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~  162 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA  162 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHH
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhH
Confidence            99999999999953333377889999999999999999999999999999988888999999998 44 55667788999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|+|++.|++.++.|++++||+|++|+||+++|++.....+.          ....... ..+.+++.+|+|+|+++++
T Consensus       163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~-~~p~~r~~~~~dva~~v~~  231 (264)
T 3i4f_A          163 AAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE----------ARQLKEH-NTPIGRSGTGEDIARTISF  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH----------HHHC---------CCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH----------HHHHHhh-cCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999997654321          1111112 2344889999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCccccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      |+++...+++|++|.+|||++....
T Consensus       232 l~s~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          232 LCEDDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             HHSGGGTTCCSCEEEESCSCCCCC-
T ss_pred             HcCcccCCCCCcEEEEcCceeeccC
Confidence            9999899999999999999987543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=4.1e-47  Score=324.29  Aligned_cols=239  Identities=23%  Similarity=0.287  Sum_probs=206.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-------HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-------GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~   85 (280)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+.+.. ..++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998753       3444444322 357889999999999999999


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--CC
Q 023613           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--GL  163 (280)
Q Consensus        86 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--~~  163 (280)
                      +++.++++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+  .+
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWL--RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcccC--CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCC
Confidence            9999999999999999999765  7888999999999999999999999999999999888899999999998887  67


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCC-eeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPY-AVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      +...|++||+|+++|++.++.|++++||+||+|+|| .++|++.... +..                   ...++.+|+|
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~-~~~-------------------~~~~~~~ped  219 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML-PGV-------------------DAAACRRPEI  219 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--------CC-------------------CGGGSBCTHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc-ccc-------------------cccccCCHHH
Confidence            788999999999999999999999999999999999 6899986321 110                   0134679999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCcccccccc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +|+++++|+++...++||+++ +|||.....+.
T Consensus       220 vA~~v~~l~s~~~~~itG~~i-~~~g~~~~~~~  251 (274)
T 3e03_A          220 MADAAHAVLTREAAGFHGQFL-IDDEVLAQAGI  251 (274)
T ss_dssp             HHHHHHHHHTSCCTTCCSCEE-EHHHHHHHTTC
T ss_pred             HHHHHHHHhCccccccCCeEE-EcCcchhhccc
Confidence            999999999999999999999 88887765543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2e-46  Score=318.10  Aligned_cols=241  Identities=31%  Similarity=0.489  Sum_probs=209.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.  .++.++.+|++|+++++++++++.+.++
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999999988887776665  4688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.| ++ .|+||++||..+. +.++...|+++|+
T Consensus        80 ~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~  154 (263)
T 2a4k_A           80 RLHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKL  154 (263)
T ss_dssp             CCCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSS
T ss_pred             CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHH
Confidence            99999999998755  678889999999999999999999999999999 54 7999999999988 7778889999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.|++.++.|++++||++|+|+||+++|++.... +..         ........ .+.+++.+|+|+|+++++|+++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~---------~~~~~~~~-~p~~~~~~p~dvA~~v~~l~s~  223 (263)
T 2a4k_A          155 GVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-PPW---------AWEQEVGA-SPLGRAGRPEEVAQAALFLLSE  223 (263)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-CHH---------HHHHHHHT-STTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-CHH---------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999987543 110         11111122 2348899999999999999999


Q ss_pred             CCCCeeecEEEeCCccccc
Q 023613          254 EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~  272 (280)
                      ...+++|+.+.+|||+...
T Consensus       224 ~~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          224 ESAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             GGTTCCSCEEEESTTTTTC
T ss_pred             cccCCcCCEEEECCCcccc
Confidence            8899999999999998764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.5e-46  Score=321.23  Aligned_cols=256  Identities=27%  Similarity=0.390  Sum_probs=216.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++++++++++++++.+
T Consensus        16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (277)
T 2rhc_B           16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE   95 (277)
T ss_dssp             TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34468999999999999999999999999999999999998877776666532 24688899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHh--cccCCCceEEEEccccccccCCCCccc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI--MIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.  |.+++.++||++||..+..+.++...|
T Consensus        96 ~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  173 (277)
T 2rhc_B           96 RYGPVDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY  173 (277)
T ss_dssp             HTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHH
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccH
Confidence            99999999999998754  67889999999999999999999999999999  877667999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh--hhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED--AMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      +++|++++.|++.++.|++++||+||+|+||+++|++.............  .......+ ... .+.+++++|+|+|++
T Consensus       174 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~p~~r~~~~~dvA~~  251 (277)
T 2rhc_B          174 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRI-TAR-VPIGRYVQPSEVAEM  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHH-HHH-STTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHH-Hhc-CCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999986432110000000  00001111 122 244889999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCcccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++|+++...+++|+++.+|||+..
T Consensus       252 v~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          252 VAYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHhCchhcCCCCcEEEECCCccc
Confidence            9999999888999999999999753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.1e-47  Score=319.44  Aligned_cols=247  Identities=27%  Similarity=0.408  Sum_probs=183.0

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. ..++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999888887777643 35788899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC-CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           91 KFGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .++++|++|||||+... ...++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+.   ++...|+
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence            99999999999998431 1256778999999999999999999999999999988888999999999876   4567899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|++.|++.++.|++++||+|++|+||+++|++.....+..         +.....+. .+.+++.+|+|+|+++++
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~dva~~~~~  229 (253)
T 3qiv_A          160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKE---------MVDDIVKG-LPLSRMGTPDDLVGMCLF  229 (253)
T ss_dssp             CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------------CCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHH---------HHHHHhcc-CCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999876543321         11111122 233788999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|++|.+|||...
T Consensus       230 l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          230 LLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             HHSGGGTTCCSCEEEC------
T ss_pred             HcCccccCCCCCEEEECCCeec
Confidence            9999999999999999999875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.4e-46  Score=317.58  Aligned_cols=242  Identities=38%  Similarity=0.512  Sum_probs=213.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  .++.++.+|++++++++++++++.+.+++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG--GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999999888777766552  46788999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++
T Consensus        80 iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  157 (254)
T 1hdc_A           80 VDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             CCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence            9999999998754  67888999999999999999999999999999987778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCC-CHHHHHHHHHHhcCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~L~s~  253 (280)
                      ++.|++.++.|++++||+||+|+||+++|++.....+..         ...+ .. ..+.+++. +|+|+|+++++|+++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---------~~~~-~~-~~p~~~~~~~~~dvA~~v~~l~s~  226 (254)
T 1hdc_A          158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ---------GEGN-YP-NTPMGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC---------STTS-CT-TSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhH---------HHHH-Hh-cCCCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999865421110         0000 11 12337788 999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||+..
T Consensus       227 ~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          227 TSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             hhcCCCCCEEEECCCccc
Confidence            888999999999999865

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-46  Score=316.20  Aligned_cols=251  Identities=31%  Similarity=0.458  Sum_probs=212.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.. ..++.++.+|++|+++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999998877776666532 24688899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      +||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+++|+++
T Consensus        82 ~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  159 (256)
T 1geg_A           82 VIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  159 (256)
T ss_dssp             EEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHH
Confidence            99999998754  6788899999999999999999999999999998766 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +.|++.++.|++++||+||+|+||+++|++............. ..........+. .+.+++.+|+|+|+++++|+++.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~p~dvA~~v~~l~s~~  238 (256)
T 1geg_A          160 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR-ITLGRLSEPEDVAACVSYLASPD  238 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT-CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999986432100000000 000011111222 34488999999999999999998


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++|+.+.+|||+..
T Consensus       239 ~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          239 SDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             ccCCCCCEEEeCCCccC
Confidence            89999999999999763

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6e-46  Score=314.07  Aligned_cols=247  Identities=32%  Similarity=0.487  Sum_probs=211.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+. ++..+.+.   . .++.+|++|+++++++++++.+.++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG---G-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT---C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh---C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999999877 66656554   3 6789999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+
T Consensus        77 ~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           77 RVDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  154 (256)
T ss_dssp             CCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence            99999999998754  6788899999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.|++.++.|++++||++|+|+||+++|++............   .....+ .. ..+.+++.+|+|+|+++++|+++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~-~~-~~~~~~~~~~~dvA~~~~~l~s~  229 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPE---RTRRDW-ED-LHALRRLGKPEEVAEAVLFLASE  229 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC-----------CHHH-HT-TSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCH---HHHHHH-Hh-cCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999998643210000000   001111 11 22348899999999999999998


Q ss_pred             CCCCeeecEEEeCCccccc
Q 023613          254 EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~  272 (280)
                      ...+++|+.+.+|||+...
T Consensus       230 ~~~~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          230 KASFITGAILPVDGGMTAS  248 (256)
T ss_dssp             GGTTCCSCEEEESTTGGGB
T ss_pred             hhcCCCCCEEEECCCcccc
Confidence            8889999999999998653

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3.1e-46  Score=316.47  Aligned_cols=248  Identities=29%  Similarity=0.394  Sum_probs=214.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.. ..++.++.+|++++++++++++++.+.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999998877766665532 3468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|
T Consensus        90 g~iD~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  168 (260)
T 2zat_A           90 GGVDILVSNAAVNPFF-GNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSK  168 (260)
T ss_dssp             SCCCEEEECCCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence            9999999999986422 567889999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|+++++|++
T Consensus       169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~v~~l~s  239 (260)
T 2zat_A          169 TALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKA--------RKEYMKES-LRIRRLGNPEDCAGIVSFLCS  239 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHH--------HHHHHHHH-HTCSSCBCGGGGHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChH--------HHHHHHhc-CCCCCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999998643211110        01111112 234789999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||+..
T Consensus       240 ~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          240 EDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             GGGTTCCSCEEEESTTCCC
T ss_pred             cccCCccCCEEEECCCccc
Confidence            9889999999999999764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-46  Score=319.77  Aligned_cols=257  Identities=26%  Similarity=0.383  Sum_probs=216.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-C---CeEEEecCCCCHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-P---DTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~---~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... .   ++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998887776666432 2   688899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCC----CCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-CCC
Q 023613           91 KFGTLDIMVNNAGISGAPCPD----IREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGP  165 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~~  165 (280)
                      .++++|+||||||+...  .+    +.+.+.++|++.+++|+.+++.++++++|.|.+++ ++||++||..+..+. ++.
T Consensus        83 ~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIP--DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDF  159 (280)
T ss_dssp             HHSCCCEEEECCCCCCC--CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSS
T ss_pred             hcCCCCEEEECCCCCCC--CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcc
Confidence            99999999999998754  44    77889999999999999999999999999997655 999999999998887 888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+++|++++.|++.++.|++++||+||+|+||+++|++.............. ..+...... ..+.+++.+|+|+|+
T Consensus       160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~-~~p~~~~~~pedvA~  237 (280)
T 1xkq_A          160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKF-YNFMASHKE-CIPIGAAGKPEHIAN  237 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHH-HHHHHHCTT-TCTTSSCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccch-HHHHHHHHc-CCCCCCCCCHHHHHH
Confidence            999999999999999999999999999999999999999865532111000000 001111111 234488999999999


Q ss_pred             HHHHhcCCC-CCCeeecEEEeCCccccccccc
Q 023613          246 AVLFLASDE-ARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       246 ~~~~L~s~~-~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ++++|+++. ..+++|+.+.+|||+....+++
T Consensus       238 ~v~~l~s~~~~~~~tG~~i~vdgG~~~~~~~~  269 (280)
T 1xkq_A          238 IILFLADRNLSFYILGQSIVADGGTSLVMGTQ  269 (280)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGCBGGG
T ss_pred             HHHHhcCcccccCccCCeEEECCCcccccCcc
Confidence            999999987 8899999999999998766554

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=7.1e-47  Score=318.65  Aligned_cols=237  Identities=22%  Similarity=0.290  Sum_probs=202.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---C-CCeEEEecCCCCHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---E-PDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..   . .++.++.+|++++++++++++++
T Consensus         2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (250)
T 3nyw_A            2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI   81 (250)
T ss_dssp             ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999999888877666532   2 57889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+.++++|++|||||+...  .++ +.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|
T Consensus        82 ~~~~g~iD~lvnnAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (250)
T 3nyw_A           82 HQKYGAVDILVNAAAMFMD--GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIY  158 (250)
T ss_dssp             HHHHCCEEEEEECCCCCCC--CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHH
T ss_pred             HHhcCCCCEEEECCCcCCC--CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcch
Confidence            9999999999999999765  556 7899999999999999999999999999988888999999999999977778999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++||+|+++|++.++.|++++||+||+|+||+++|++........                   +.+++.+|+|+|++++
T Consensus       159 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-------------------~~~~~~~p~dva~~v~  219 (250)
T 3nyw_A          159 GSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPF-------------------KDEEMIQPDDLLNTIR  219 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCCS-------------------CGGGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCCc-------------------ccccCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999876433211                   1156789999999999


Q ss_pred             HhcCCCCC-CeeecEEEeCCcccc
Q 023613          249 FLASDEAR-YISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~-~~~G~~i~~dgG~~~  271 (280)
                      +|+++... +++|..|.+|||...
T Consensus       220 ~l~s~~~~~~~~~~~i~vd~~~~~  243 (250)
T 3nyw_A          220 CLLNLSENVCIKDIVFEMKKSIIE  243 (250)
T ss_dssp             HHHTSCTTEECCEEEEEEHHHHHC
T ss_pred             HHHcCCCceEeeEEEEEeeccccc
Confidence            99996555 668889999999754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-46  Score=315.56  Aligned_cols=245  Identities=35%  Similarity=0.535  Sum_probs=214.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++.+|++|+++++++++.+.+.+++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--ERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999999888887777663  46888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ ++||++||..+..+.++...|+++|++
T Consensus        81 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (253)
T 1hxh_A           81 LNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHH
Confidence            9999999998754  6788999999999999999999999999999998776 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCC--CeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh--hccCCCCCCCHHHHHHHHHHh
Q 023613          175 VLGLNKNVAAELGKY--GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR--NANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       175 l~~~~~~la~e~~~~--gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ++.|++.++.|++++  ||++|+|+||+++|++.....+...        ...+...  ...+.+++.+|+|+|+++++|
T Consensus       158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  229 (253)
T 1hxh_A          158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGV--------SKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTC--------CHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhh--------hHHHHhhhhccCccCCCCCHHHHHHHHHHH
Confidence            999999999999988  9999999999999998654222110        0110111  012347889999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...+++|+.+.+|||+...
T Consensus       230 ~s~~~~~~tG~~~~vdgG~~~~  251 (253)
T 1hxh_A          230 ASDESSVMSGSELHADNSILGM  251 (253)
T ss_dssp             HSGGGTTCCSCEEEESSSCTTT
T ss_pred             cCccccCCCCcEEEECCCcccc
Confidence            9998899999999999998653

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=7.7e-46  Score=318.61  Aligned_cols=247  Identities=26%  Similarity=0.378  Sum_probs=206.7

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhC--CCCCeEEEecCCCC----HHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLG--GEPDTFFCHCDVTK----EEDVCS   83 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~--~~~~~~~~~~D~~~----~~~~~~   83 (280)
                      +...++++|++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.  ...++.++.+|+++    ++++++
T Consensus        16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             ------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHH
Confidence            344568999999999999999999999999999999999998 77776666553  23578899999999    999999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCC-----CC-----CCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC------C
Q 023613           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDI-----RE-----ADLSEFEKVFDINVKGVFHGMKHAARIMIPQT------K  147 (280)
Q Consensus        84 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~  147 (280)
                      +++++.+.++++|+||||||+...  .++     .+     .+.++|++.+++|+.+++.+++.++|.|.+++      .
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~  173 (288)
T 2x9g_A           96 IINSCFRAFGRCDVLVNNASAFYP--TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSN  173 (288)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC--CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCC--CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCC
Confidence            999999999999999999998754  455     56     88899999999999999999999999998766      6


Q ss_pred             ceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHH
Q 023613          148 GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV  227 (280)
Q Consensus       148 ~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~  227 (280)
                      ++||++||..+..+.++...|++||+|++.|++.++.|++++||+||+|+||+++|++ . ..+  ..       ...+.
T Consensus       174 g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~--~~-------~~~~~  242 (288)
T 2x9g_A          174 LSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGE--EE-------KDKWR  242 (288)
T ss_dssp             EEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCH--HH-------HHHHH
T ss_pred             eEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cCh--HH-------HHHHH
Confidence            8999999999999999999999999999999999999999999999999999999998 3 211  10       11111


Q ss_pred             hhhccCCCCC-CCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          228 ARNANMQGTE-LTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       228 ~~~~~~~~~~-~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                       .. .+.+++ .+|+|+|+++++|+++...+++|+.+.+|||+...
T Consensus       243 -~~-~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          243 -RK-VPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             -HT-CTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -hh-CCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence             22 234788 99999999999999998899999999999998753

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.2e-46  Score=315.64  Aligned_cols=234  Identities=30%  Similarity=0.428  Sum_probs=205.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+...        ..++.++.+|++|+++++++++++.+.+
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------DPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            45689999999999999999999999999999999999876422        1368899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--CCCCccchh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAYTG  170 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--~~~~~~Y~~  170 (280)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+  .++...|++
T Consensus        95 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  172 (260)
T 3un1_A           95 GRIDSLVNNAGVFLA--KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL  172 (260)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence            999999999999865  7888999999999999999999999999999999888899999999887644  345689999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ||+|++.|++.++.|++++||+||+|+||+++|++.....             ...... ..+.+++.+|+|+|+++++|
T Consensus       173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-------------~~~~~~-~~p~~r~~~~~dva~av~~L  238 (260)
T 3un1_A          173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET-------------HSTLAG-LHPVGRMGEIRDVVDAVLYL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG-------------HHHHHT-TSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH-------------HHHHhc-cCCCCCCcCHHHHHHHHHHh
Confidence            9999999999999999999999999999999999864311             111112 23458999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                        ....+++|++|.+|||+..+
T Consensus       239 --~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          239 --EHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             --HHCTTCCSCEEEESTTGGGC
T ss_pred             --cccCCCCCcEEEECCCeecc
Confidence              45679999999999998764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.3e-46  Score=328.11  Aligned_cols=242  Identities=20%  Similarity=0.257  Sum_probs=213.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-------HHHHHHHhCC-CCCeEEEecCCCCHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-------GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~   84 (280)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++.. ..++.++.+|++|+++++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            456899999999999999999999999999999999998764       3344444432 35788899999999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--C
Q 023613           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--G  162 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--~  162 (280)
                      ++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+  .
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~  197 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISL--TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF  197 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC
Confidence            99999999999999999999865  7889999999999999999999999999999999888899999999998887  6


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCe-eeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHH
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA-VATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      ++...|++||++++.|++.++.|++ +||+||+|+||+ ++|++.......                   .+.+++.+|+
T Consensus       198 ~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~-------------------~~~~r~~~pe  257 (346)
T 3kvo_A          198 KQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGP-------------------GIESQCRKVD  257 (346)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC---------------------CGGGCBCTH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccc-------------------cccccCCCHH
Confidence            7889999999999999999999999 899999999995 999875432211                   1126788999


Q ss_pred             HHHHHHHHhcCCCCCCeeecEEEeCCccccccccccc
Q 023613          242 DVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLRV  278 (280)
Q Consensus       242 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~  278 (280)
                      |+|+++++|+++ .+++||+++ +|||+....++.++
T Consensus       258 dvA~~v~~L~s~-~~~itG~~i-vdgg~~~~~g~~~~  292 (346)
T 3kvo_A          258 IIADAAYSIFQK-PKSFTGNFV-IDENILKEEGIENF  292 (346)
T ss_dssp             HHHHHHHHHHTS-CTTCCSCEE-EHHHHHHHTTCCCG
T ss_pred             HHHHHHHHHHhc-CCCCCceEE-ECCcEehhceeecc
Confidence            999999999999 889999999 99998887777665

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5e-46  Score=321.04  Aligned_cols=255  Identities=29%  Similarity=0.407  Sum_probs=214.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CC---CeEEEecCCCCHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EP---DTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..   ++.++.+|++++++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            3458999999999999999999999999999999999998887776666532 22   6888999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCC--CCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-CCC
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPD--IREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-LGP  165 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-~~~  165 (280)
                      .+.++++|+||||||+...  .+  +.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+. ++.
T Consensus       101 ~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~  177 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLA--DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGY  177 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTS
T ss_pred             HHhcCCCCEEEECCCcCcC--CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCc
Confidence            9999999999999998754  44  88899999999999999999999999999998766 999999999998888 888


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+++|++++.|++.++.|++++||+||+|+||+++|++.............. ......... ..+.+++.+|+|+|+
T Consensus       178 ~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~-~~p~~r~~~pedvA~  255 (297)
T 1xhl_A          178 PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKL-YSFIGSRKE-CIPVGHCGKPEEIAN  255 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHH-HHHHHHCTT-TCTTSSCBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccch-HHHHHHHHh-cCCCCCCcCHHHHHH
Confidence            999999999999999999999999999999999999999876532111000000 001111111 234488999999999


Q ss_pred             HHHHhcCCC-CCCeeecEEEeCCccccc
Q 023613          246 AVLFLASDE-ARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       246 ~~~~L~s~~-~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++|+++. ..+++|+.+.+|||+...
T Consensus       256 ~v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          256 IIVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhCCcccCCccCcEEEECCCcccc
Confidence            999999987 889999999999998754

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=7.4e-46  Score=315.36  Aligned_cols=244  Identities=23%  Similarity=0.386  Sum_probs=210.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++.+|++|||||++|||+++|++|+++|++|++ ..|+.+..++..+.+.. ..++.++.+|++++++++++++++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999866 55666666666666533 35788999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcc-cCCCceEEEEccccccccCCCCccch
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .++++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.+++.|. ++..++||++||..+..+.+++..|+
T Consensus       101 ~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARD--AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYS  178 (267)
T ss_dssp             HHCCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HhCCccEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhH
Confidence            99999999999999865  7888999999999999999999999999998886 55679999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|+|++.|++.++.|++++||+|++|+||+++|++....   ...       ... .... .+.+++.+|+|+|+++++
T Consensus       179 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~-------~~~-~~~~-~p~~~~~~~edva~~~~~  246 (267)
T 4iiu_A          179 AAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESA-------LKE-AMSM-IPMKRMGQAEEVAGLASY  246 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHH-------HHH-HHHT-CTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHH-------HHH-HHhc-CCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999987543   110       111 1122 334889999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCccc
Q 023613          250 LASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++...+++|++|.+|||+.
T Consensus       247 L~s~~~~~itG~~i~vdGG~~  267 (267)
T 4iiu_A          247 LMSDIAGYVTRQVISINGGML  267 (267)
T ss_dssp             HHSGGGTTCCSCEEEESTTCC
T ss_pred             HhCCcccCccCCEEEeCCCcC
Confidence            999999999999999999973

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=7.1e-46  Score=315.80  Aligned_cols=252  Identities=24%  Similarity=0.232  Sum_probs=208.2

Q ss_pred             ccccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa--~~giG~~la~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.++++|++|||||  ++|||+++|++|+++|++|++++|+.+. ++++.+.+.  .++.++.+|++++++++++++++.
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP--AKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS--SCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC--CCceEEEccCCCHHHHHHHHHHHH
Confidence            44688999999999  9999999999999999999999998765 355544443  357788999999999999999999


Q ss_pred             HHcC---CccEEEECCCCCCCC---CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC
Q 023613           90 EKFG---TLDIMVNNAGISGAP---CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL  163 (280)
Q Consensus        90 ~~~~---~~d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  163 (280)
                      +.++   ++|++|||||+....   ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||... .+.+
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~  156 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMP  156 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCT
T ss_pred             HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccC
Confidence            9999   999999999986510   157788999999999999999999999999999965  489999999876 6778


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCC---chhhhhhhhhhHHHHHhhhccCCC-CCCC
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP---EEERTEDAMVGFRNFVARNANMQG-TELT  239 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  239 (280)
                      .+..|+++|+++++|++.++.|++++||+||+|+||+++|++......   .+..... ............ +.+ ++.+
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-p~~rr~~~  234 (269)
T 2h7i_A          157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQ-IQLLEEGWDQRA-PIGWNMKD  234 (269)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHH-HHHHHHHHHHHC-TTCCCTTC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHH-HHHHHHhhhccC-CcccCCCC
Confidence            889999999999999999999999999999999999999998654211   1110000 000111112223 347 6999


Q ss_pred             HHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          240 ANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+|+|++++||+++...++||+.+.+|||+..
T Consensus       235 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          235 ATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             CHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence            99999999999999999999999999999865

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-46  Score=314.86  Aligned_cols=251  Identities=21%  Similarity=0.246  Sum_probs=207.1

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ...++++|++|||||+  +|||+++|++|+++|++|++++|+....+.+.+.......+.++.||++++++++++++++.
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            3456899999999998  99999999999999999999999865444333322222357889999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCC--CCCCCC-CCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           90 EKFGTLDIMVNNAGISGAP--CPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      +.++++|++|||||+....  ..++.+ .+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++..
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  165 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYN  165 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTT
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCcc
Confidence            9999999999999987531  033444 899999999999999999999999999964  58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|+++|++.++.|++++||+|++|+||+++|++........        .......... +.+++.+|+|+|++
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~pedva~~  236 (271)
T 3ek2_A          166 TMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFG--------KILDFVESNS-PLKRNVTIEQVGNA  236 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHH--------HHHHHHHHHS-TTSSCCCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchH--------HHHHHHHhcC-CcCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999865532111        1112222223 34889999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCcccccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +++|+++...+++|++|.+|||+...-
T Consensus       237 i~~l~s~~~~~~tG~~i~vdgG~~~~~  263 (271)
T 3ek2_A          237 GAFLLSDLASGVTAEVMHVDSGFNAVV  263 (271)
T ss_dssp             HHHHHSGGGTTCCSEEEEESTTGGGBC
T ss_pred             HHHHcCcccCCeeeeEEEECCCeeeeh
Confidence            999999988999999999999998754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1.7e-45  Score=315.18  Aligned_cols=248  Identities=20%  Similarity=0.257  Sum_probs=210.7

Q ss_pred             cccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .|.++++|++|||||+  +|||+++|++|+++|++|++++|+.  +.++++.+..   .++.++.||+++.+++++++++
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF---NPAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG---CCSEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc---CCceEEEeecCCHHHHHHHHHH
Confidence            3557899999999988  7899999999999999999999987  3333333322   3578899999999999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCC--CCCCCC-CCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023613           88 TVEKFGTLDIMVNNAGISGAP--CPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  164 (280)
                      +.+.++++|+||||||+....  ..++.+ .+.++|++.+++|+.+++.++++++|.|.++ .++||++||..+..+.++
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~  175 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPS  175 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTT
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCC
Confidence            999999999999999986431  133444 8999999999999999999999999999765 699999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      +..|++||+|++.|++.++.|++++||+|++|+||+++|++.........        ........ .+.+++.+|+|+|
T Consensus       176 ~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~~~~~pedvA  246 (280)
T 3nrc_A          176 YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKK--------MLDYNAMV-SPLKKNVDIMEVG  246 (280)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHH--------HHHHHHHH-STTCSCCCHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHH--------HHHHHHhc-CCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999766433211        11122222 3348899999999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          245 NAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++++|+++...+++|++|.+|||+...
T Consensus       247 ~~v~~l~s~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          247 NTVAFLCSDMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHhCcccCCcCCcEEEECCCcccc
Confidence            9999999998999999999999999864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=9.6e-47  Score=329.15  Aligned_cols=247  Identities=30%  Similarity=0.469  Sum_probs=213.5

Q ss_pred             CccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----------cchHHHHHHHhCC-CCCeEEEecCCCCH
Q 023613           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----------DNLGQQVCQSLGG-EPDTFFCHCDVTKE   78 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~----------~~~~~~~~~~~~~-~~~~~~~~~D~~~~   78 (280)
                      +.++.+++||++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++.. ..++.++.+|++|+
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            445667999999999999999999999999999999999987          5666666666543 35788899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC------CceEEE
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT------KGTIIS  152 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~  152 (280)
                      ++++++++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+..      .|+||+
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~  176 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRD--RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIIN  176 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEE
Confidence            99999999999999999999999999865  7889999999999999999999999999999987532      379999


Q ss_pred             EccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc
Q 023613          153 ICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN  232 (280)
Q Consensus       153 isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
                      +||..+..+.++...|++||+|+++|++.++.|++++||+||+|+|| +.|++...........         .     .
T Consensus       177 isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~---------~-----~  241 (322)
T 3qlj_A          177 TSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMAT---------Q-----D  241 (322)
T ss_dssp             ECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------------------
T ss_pred             EcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhc---------c-----c
Confidence            99999999999999999999999999999999999999999999999 9999876654332110         0     0


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccccc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ...++.+|+|+|++++||+++...++||++|.+|||+....
T Consensus       242 ~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~  282 (322)
T 3qlj_A          242 QDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVA  282 (322)
T ss_dssp             --CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEE
T ss_pred             cccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccC
Confidence            01346799999999999999999999999999999998754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.2e-45  Score=311.95  Aligned_cols=252  Identities=27%  Similarity=0.459  Sum_probs=210.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+  +...+.+.. ..++.++.+|++|+++++++++++.+.++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            367999999999999999999999999999999999876  333333322 35688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|+
T Consensus        79 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (255)
T 2q2v_A           79 GVDILVNNAGIQHV--APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKH  156 (255)
T ss_dssp             SCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHH
Confidence            99999999998754  6788899999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++.|++.++.|++++||+||+|+||+++|++............. .......+... ..+.+++++|+|+|+++++|++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~dvA~~~~~l~s  235 (255)
T 2q2v_A          157 GVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAE-KQPSLAFVTPEHLGELVLFLCS  235 (255)
T ss_dssp             HHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTT-TCTTCCCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhc-cCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999986532100000000 00000111012 2344889999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||+..
T Consensus       236 ~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          236 EAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             CccCCCCCCEEEECCCccC
Confidence            8888999999999999764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-45  Score=313.36  Aligned_cols=253  Identities=33%  Similarity=0.484  Sum_probs=214.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+..  ++.++.+|++|+++++++++++.+.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~d~~~v~~~~~~~~~~~g   85 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN--GGFAVEVDVTKRASVDAAMQKAIDALG   85 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT--CCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999999998887777665543  577889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+++|
T Consensus        86 ~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (263)
T 3ak4_A           86 GFDLLCANAGVSTM--RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK  163 (263)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHH
Confidence            99999999998754  6788899999999999999999999999999998776 69999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhh-hhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA-MVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      ++++.|++.++.|++++||++|+|+||+++|++.............. ........... .+.+++.+|+|+|+++++|+
T Consensus       164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~dvA~~v~~l~  242 (263)
T 3ak4_A          164 FAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL-TPLGRIEEPEDVADVVVFLA  242 (263)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999864321000000000 00011111222 34488999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++..++++|+.+.+|||+..
T Consensus       243 s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          243 SDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             SGGGTTCCSCEEEESSSSSC
T ss_pred             CccccCCCCCEEEECcCEeC
Confidence            98888999999999999753

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.3e-46  Score=312.84  Aligned_cols=246  Identities=20%  Similarity=0.224  Sum_probs=206.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ||++|||||++|||+++|++|+++|  +.|++++|+++.++++.+.+.  .++.++.+|++|+++++++++++.+.++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG--DRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG--GGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            7999999999999999999999985  789999999988888777664  478889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.+++..|++||+|+
T Consensus        80 d~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~  157 (254)
T 3kzv_A           80 DSLVANAGVLEPV-QNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAAL  157 (254)
T ss_dssp             CEEEEECCCCCCC-TTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHH
T ss_pred             cEEEECCcccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHH
Confidence            9999999986432 6788999999999999999999999999999998765 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      ++|++.++.|+  +||+||+|+||+++|++........... ............. .+.+++.+|+|+|++++||+++..
T Consensus       158 ~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~r~~~p~dva~~v~~L~s~~~  233 (254)
T 3kzv_A          158 NHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPS-SMSAEQLKMFRGL-KENNQLLDSSVPATVYAKLALHGI  233 (254)
T ss_dssp             HHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTT-TSCHHHHHHHHHH-HTTC----CHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCcc-ccCHHHHHHHHHH-HhcCCcCCcccHHHHHHHHHhhcc
Confidence            99999999998  6899999999999999987643321100 0000011112222 234899999999999999999984


Q ss_pred             -CCeeecEEEeCCcccc
Q 023613          256 -RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 -~~~~G~~i~~dgG~~~  271 (280)
                       .++||+.+.+|||...
T Consensus       234 ~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          234 PDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             CGGGTTCEEETTCGGGG
T ss_pred             cCCCCccEEEecCcccc
Confidence             8999999999999764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=2.5e-45  Score=314.68  Aligned_cols=254  Identities=26%  Similarity=0.424  Sum_probs=210.4

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +...++++|++|||||++|||+++|++|+++|++|++++|+.+. .+...+.+.. ..++.++.+|+++.++++++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence            34456899999999999999999999999999999999998654 3444344322 357888999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-Ccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-PHA  167 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-~~~  167 (280)
                      .+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|  ++.|+||++||..+..+.++ ...
T Consensus       102 ~~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~  177 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAV  177 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcc
Confidence            9999999999999998754  678889999999999999999999999999999  34689999999999887764 889


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc----hhhhhhhhhhHHHHHhhhccCCCCCCCHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE----EERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      |++||++++.|++.++.|++++||+||+|+||+++|++.......    ......  .....+......+.+++.+|+|+
T Consensus       178 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~r~~~p~dv  255 (283)
T 1g0o_A          178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSN--EEVDEYAAVQWSPLRRVGLPIDI  255 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCH--HHHHHHHHHHSCTTCSCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCH--HHHHHHHhhcCCCCCCCcCHHHH
Confidence            999999999999999999999999999999999999986542110    000000  00111111012345899999999


Q ss_pred             HHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          244 ANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       244 a~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |++++||+++...+++|+++.+|||+.
T Consensus       256 A~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          256 ARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHhCccccCcCCCEEEeCCCcc
Confidence            999999999988999999999999975

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=5.8e-46  Score=312.75  Aligned_cols=241  Identities=33%  Similarity=0.500  Sum_probs=195.5

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ...++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+.  .++.++.+|+++.+++.+++++    
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~----   81 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK--DNYTIEVCNLANKEECSNLISK----   81 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHT----
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc--cCccEEEcCCCCHHHHHHHHHh----
Confidence            3457899999999999999999999999999999999999998888877776  4678889999999998877764    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      .+++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++|
T Consensus        82 ~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  159 (249)
T 3f9i_A           82 TSNLDILVCNAGITSD--TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCAS  159 (249)
T ss_dssp             CSCCSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHH
Confidence            3789999999998765  67778899999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|++.|++.++.|++++||++++|+||+++|++.....+..          ....... .+.+++.+|+|+|+++++|+
T Consensus       160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~dva~~~~~l~  228 (249)
T 3f9i_A          160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQ----------REAIVQK-IPLGTYGIPEDVAYAVAFLA  228 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHH----------HHHHHHH-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHH----------HHHHHhc-CCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999876543211          1111122 23489999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+++.+|||+..
T Consensus       229 s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          229 SNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CCccCCccCcEEEECCCEee
Confidence            99999999999999999875

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-45  Score=322.50  Aligned_cols=245  Identities=25%  Similarity=0.313  Sum_probs=210.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhC--CCCCeEEEecCCCCHH----------
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLG--GEPDTFFCHCDVTKEE----------   79 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~----------   79 (280)
                      |.++++|++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++.  ...++.++.+|+++.+          
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  120 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS  120 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence            3348899999999999999999999999999999999 99887777766653  2357889999999999          


Q ss_pred             -------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCC--------------HHHHHHHhhhhhHhHHHHHHHH
Q 023613           80 -------DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREAD--------------LSEFEKVFDINVKGVFHGMKHA  138 (280)
Q Consensus        80 -------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~  138 (280)
                             +++++++++.+.++++|+||||||+...  .++.+.+              .++|++.+++|+.+++.+++++
T Consensus       121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  198 (328)
T 2qhx_A          121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  198 (328)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence                   9999999999999999999999998765  6777788              9999999999999999999999


Q ss_pred             HHhcccCC------CceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc
Q 023613          139 ARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE  212 (280)
Q Consensus       139 ~~~l~~~~------~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~  212 (280)
                      +|.|.+++      .++||++||..+..+.++...|+++|++++.|++.++.|++++||+||+|+||+++|++ . ..+.
T Consensus       199 ~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-~~~~  276 (328)
T 2qhx_A          199 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MPPA  276 (328)
T ss_dssp             HHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-SCHH
T ss_pred             HHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-ccHH
Confidence            99998766      79999999999999999999999999999999999999999999999999999999998 3 2211


Q ss_pred             hhhhhhhhhhHHHHHhhhccCCC-CCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          213 EERTEDAMVGFRNFVARNANMQG-TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                        .       ...+ ... .+.+ ++.+|+|+|+++++|+++...+++|++|.+|||+...
T Consensus       277 --~-------~~~~-~~~-~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          277 --V-------WEGH-RSK-VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             --H-------HHHH-HTT-CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             --H-------HHHH-Hhh-CCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence              0       1111 122 2336 8999999999999999998899999999999998753

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=5.1e-46  Score=312.90  Aligned_cols=237  Identities=32%  Similarity=0.419  Sum_probs=199.0

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ...++++|++|||||++|||++++++|+++|++|++++|+.+.+++          ...+.+|++|+++++++++++.+.
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~D~~~~~~~~~~~~~~~~~   78 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG----------LFGVEVDVTDSDAVDRAFTAVEEH   78 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT----------SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH----------hcCeeccCCCHHHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999998764322          124789999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++
T Consensus        79 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  156 (247)
T 1uzm_A           79 QGPVEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAAS  156 (247)
T ss_dssp             HSSCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHH
Confidence            9999999999998754  67888999999999999999999999999999988778999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.|++.++.|++++||+||+|+||+++|++..... ..         ........ .+.+++.+|+|+|+++++|+
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~---------~~~~~~~~-~p~~~~~~~~dvA~~~~~l~  225 (247)
T 1uzm_A          157 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD-ER---------IQQGALQF-IPAKRVGTPAEVAGVVSFLA  225 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC-HH---------HHHHHGGG-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC-HH---------HHHHHHhc-CCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999865421 10         11111122 23478999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||+..
T Consensus       226 s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          226 SEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             SGGGTTCCSCEEEESTTTTC
T ss_pred             CccccCCcCCEEEECCCccc
Confidence            98888999999999999864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=8.7e-46  Score=312.36  Aligned_cols=238  Identities=18%  Similarity=0.156  Sum_probs=195.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. ..++.++.||++|+++++++++++.+.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            3568899999999999999999999999999999999999988888777643 357889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++|
T Consensus        82 -g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (252)
T 3h7a_A           82 -APLEVTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASA  158 (252)
T ss_dssp             -SCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHH
T ss_pred             -CCceEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHH
Confidence             999999999999865  78899999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEE-EEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          172 KHAVLGLNKNVAAELGKYGIRV-NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v-~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      |+|+++|++.++.|++++||+| |+|+||+++|++.....+....          ..... .+.+ +.+|+|+|+++++|
T Consensus       159 Kaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~----------~~~~~-~~~~-~~~pedvA~~~~~l  226 (252)
T 3h7a_A          159 KFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFG----------KDALA-NPDL-LMPPAAVAGAYWQL  226 (252)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------CCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhh----------hhhhc-CCcc-CCCHHHHHHHHHHH
Confidence            9999999999999999999999 9999999999998765432110          01111 1224 89999999999999


Q ss_pred             cCCCCCCeeecEEEe
Q 023613          251 ASDEARYISGTNLMV  265 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~  265 (280)
                      +++...+++|++..-
T Consensus       227 ~s~~~~~~~~~i~~~  241 (252)
T 3h7a_A          227 YQQPKSAWTFEMEIR  241 (252)
T ss_dssp             HHCCGGGBCSEEEEB
T ss_pred             HhCchhcceeeEEee
Confidence            998888889987653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-45  Score=314.23  Aligned_cols=247  Identities=34%  Similarity=0.527  Sum_probs=211.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++.   .+.++.+|++|+++++++++++.+.+++
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP---GAVFILCDVTQEDDVKTLVSETIRRFGR   82 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT---TEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999999888777766654   3778999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.++ .++||++||..+..+.++...|+++|++
T Consensus        83 iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (270)
T 1yde_A           83 LDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGA  160 (270)
T ss_dssp             CCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHH
Confidence            99999999986432 578889999999999999999999999999998654 5899999999999998999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++.|++.++.|++++||+||+|+||+++|++............   ...... . ...+.+++.+|+|+|++++||+++ 
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~-~-~~~p~~r~~~p~dva~~v~~L~s~-  234 (270)
T 1yde_A          161 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPR---ASIREG-M-LAQPLGRMGQPAEVGAAAVFLASE-  234 (270)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHH---HHHHHH-H-HTSTTSSCBCHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchH---HHHHHH-h-hcCCCCCCcCHHHHHHHHHHHccc-
Confidence            9999999999999999999999999999998653211000000   001111 1 123458899999999999999997 


Q ss_pred             CCCeeecEEEeCCccccc
Q 023613          255 ARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~  272 (280)
                      ..+++|+.+.+|||+...
T Consensus       235 ~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          235 ANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             CTTCCSCEEEESTTTTSC
T ss_pred             CCCcCCCEEEECCCeecc
Confidence            689999999999998764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.1e-45  Score=310.33  Aligned_cols=238  Identities=39%  Similarity=0.633  Sum_probs=212.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+.+.  ..+.++.+|++++++++++++++.+.++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--DAARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--cCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999999888777666654  2477889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|+
T Consensus        81 ~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (260)
T 1nff_A           81 GLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  158 (260)
T ss_dssp             CCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence            99999999998754  6788899999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.|++.++.|++++||++|+|+||+++|++..  ....           .+ .  ..+.+++.+|+|+|+++++|+++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~-----------~~-~--~~~~~~~~~~~dvA~~v~~l~s~  222 (260)
T 1nff_A          159 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVPE-----------DI-F--QTALGRAAEPVEVSNLVVYLASD  222 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSCT-----------TC-S--CCSSSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cchh-----------hH-H--hCccCCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999864  1110           00 0  12347889999999999999998


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||+..
T Consensus       223 ~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          223 ESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             cccCCcCCEEEECCCeec
Confidence            888999999999999865

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=4.2e-46  Score=314.40  Aligned_cols=239  Identities=31%  Similarity=0.484  Sum_probs=198.9

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ....++++|++|||||++|||+++|++|+++|++|++++|+.+.++          .+.++.+|++|+++++++++++.+
T Consensus        14 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~Dl~d~~~v~~~~~~~~~   83 (253)
T 2nm0_A           14 LVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----------GFLAVKCDITDTEQVEQAYKEIEE   83 (253)
T ss_dssp             ------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----------cceEEEecCCCHHHHHHHHHHHHH
Confidence            3445788999999999999999999999999999999999876432          267889999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++
T Consensus        84 ~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (253)
T 2nm0_A           84 THGPVEVLIANAGVTKD--QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAA  161 (253)
T ss_dssp             HTCSCSEEEEECSCCTT--TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHH
Confidence            99999999999998754  6788889999999999999999999999999998777899999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|++++.|++.++.|++++||++|+|+||+++|++.....+ . .       ...+ ... .+.+++.+|+|+|+++++|
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~-~-------~~~~-~~~-~p~~~~~~p~dvA~~i~~l  230 (253)
T 2nm0_A          162 SKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD-E-Q-------RANI-VSQ-VPLGRYARPEEIAATVRFL  230 (253)
T ss_dssp             HHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------C-------HHHH-HTT-CTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH-H-H-------HHHH-Hhc-CCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999998653211 1 0       1111 111 2347899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...+++|+.+.+|||+...
T Consensus       231 ~s~~~~~~tG~~i~vdGG~~~~  252 (253)
T 2nm0_A          231 ASDDASYITGAVIPVDGGLGMG  252 (253)
T ss_dssp             HSGGGTTCCSCEEEESTTTTCC
T ss_pred             hCccccCCcCcEEEECCccccC
Confidence            9998899999999999998653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=4.4e-45  Score=310.11  Aligned_cols=250  Identities=30%  Similarity=0.436  Sum_probs=211.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.          ..++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            346889999999999999999999999999999999998764          2467889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||
T Consensus        73 g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (264)
T 2dtx_A           73 GSISVLVNNAGIESY--GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSK  150 (264)
T ss_dssp             SCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHH
Confidence            999999999998755  678899999999999999999999999999999887789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchh-hhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE-RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      ++++.|++.++.|++++ |+||+|+||+++|++......... ................ .+.+++.+|+|+|+++++|+
T Consensus       151 ~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~p~dvA~~v~~l~  228 (264)
T 2dtx_A          151 HAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHE-HPMQRIGKPQEVASAVAFLA  228 (264)
T ss_dssp             HHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHH-STTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999998 999999999999998654210000 0000000011111122 23488999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ++...+++|+.+.+|||+...-|..
T Consensus       229 s~~~~~~tG~~i~vdGG~~~~~p~~  253 (264)
T 2dtx_A          229 SREASFITGTCLYVDGGLSIRAPIS  253 (264)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCCCCC
T ss_pred             CchhcCCCCcEEEECCCcccCCCCC
Confidence            9888899999999999988766543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.1e-45  Score=311.90  Aligned_cols=244  Identities=25%  Similarity=0.357  Sum_probs=211.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++.. ..++.++.+|+++.++++++++.+.+.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999885 6677767666666543 3578889999999999999999998776


Q ss_pred             C------CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           93 G------TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        93 ~------~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      +      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+  .++||++||..+..+.+++.
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~  159 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFI  159 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBH
T ss_pred             cccccCCcccEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcc
Confidence            4      49999999998755  77889999999999999999999999999999843  58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|++||+|++.|++.++.|++++||+||+|+||+++|++.........        ...+... ..+.+++.+|+|+|++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~dva~~  230 (255)
T 3icc_A          160 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM--------MKQYATT-ISAFNRLGEVEDIADT  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHH--------HHHHHHH-TSTTSSCBCHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHH--------HHHhhhc-cCCcCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999876544321        1222222 2334889999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCcccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++|+++..++++|+++.+|||+++
T Consensus       231 ~~~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          231 AAFLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSTTC
T ss_pred             HHHHhCcccCCccCCEEEecCCeeC
Confidence            9999999999999999999999863

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=3.6e-45  Score=312.48  Aligned_cols=241  Identities=28%  Similarity=0.406  Sum_probs=202.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC--CCCeEEEecCCCCH----HHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG--EPDTFFCHCDVTKE----EDVCSAVDL   87 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~D~~~~----~~~~~~~~~   87 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++..  ..++.++.+|+++.    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            468999999999999999999999999999999999 88777776666532  24688899999999    999999999


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCH-----------HHHHHHhhhhhHhHHHHHHHHHHhcccCCC------ceE
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADL-----------SEFEKVFDINVKGVFHGMKHAARIMIPQTK------GTI  150 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~i  150 (280)
                      +.+.++++|+||||||+...  .++.+.+.           ++|++.+++|+.+++.++++++|.|. ++.      ++|
T Consensus        88 ~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~i  164 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSV  164 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEE
T ss_pred             HHHhcCCCCEEEECCCCCCC--CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEE
Confidence            99999999999999998754  67778888           99999999999999999999999997 555      899


Q ss_pred             EEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh
Q 023613          151 ISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       151 v~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                      |++||..+..+.+++..|++||++++.|++.++.|++++||+||+|+||+++|+  . ..+.. .       ...+ .+.
T Consensus       165 v~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~-~~~~~-~-------~~~~-~~~  232 (276)
T 1mxh_A          165 VNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--P-AMPQE-T-------QEEY-RRK  232 (276)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--S-SSCHH-H-------HHHH-HTT
T ss_pred             EEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--c-cCCHH-H-------HHHH-Hhc
Confidence            999999999999999999999999999999999999999999999999999999  2 22211 0       1111 122


Q ss_pred             ccCCCC-CCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          231 ANMQGT-ELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       231 ~~~~~~-~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                       .+.++ +.+|+|+|+++++|+++...+++|+++.+|||+..
T Consensus       233 -~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          233 -VPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             -CTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -CCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence             23477 89999999999999998888999999999999865

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=3.9e-45  Score=308.01  Aligned_cols=245  Identities=28%  Similarity=0.352  Sum_probs=195.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.        .. ..+.++.+|++|+++++++++++.+.+++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-YPFATEVMDVADAAQVAQVCQRLLAETER   74 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-CSSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-CCceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999998752        11 12678899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|++
T Consensus        75 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  152 (250)
T 2fwm_X           75 LDALVNAAGILRM--GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAA  152 (250)
T ss_dssp             CCEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHH
Confidence            9999999998764  67889999999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++.|++.++.|++++||++|+|+||+++|++....................... ...+.+++.+|+|+|+++++|+++.
T Consensus       153 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~p~dvA~~v~~l~s~~  231 (250)
T 2fwm_X          153 LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFK-LGIPLGKIARPQEIANTILFLASDL  231 (250)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhccc-ccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999865432111000000000000000 0123478999999999999999998


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ..+++|+.+.+|||+..
T Consensus       232 ~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          232 ASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             ccCCCCCEEEECCCccc
Confidence            89999999999999864

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=6.5e-45  Score=311.73  Aligned_cols=243  Identities=30%  Similarity=0.505  Sum_probs=211.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  .++.++.+|+++.++++++++.+ +.+
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~-~~~  101 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG--NRAEFVSTNVTSEDSVLAAIEAA-NQL  101 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHH-TTS
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHH-HHh
Confidence            457899999999999999999999999999999999999998888888774  57889999999999999999999 788


Q ss_pred             CCccEEEEC-CCCCCCCCCCC-----CCCCHHHHHHHhhhhhHhHHHHHHHHHHhccc------CCCceEEEEccccccc
Q 023613           93 GTLDIMVNN-AGISGAPCPDI-----READLSEFEKVFDINVKGVFHGMKHAARIMIP------QTKGTIISICSVAGAI  160 (280)
Q Consensus        93 ~~~d~li~~-ag~~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~------~~~~~iv~isS~~~~~  160 (280)
                      +++|++||| +|....  ..+     .+.+.++|++.+++|+.+++.+++.+++.|.+      +..|+||++||..+..
T Consensus       102 ~~id~lv~~aag~~~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          102 GRLRYAVVAHGGFGVA--QRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             SEEEEEEECCCCCCCC--CCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             CCCCeEEEccCccccc--ccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence            999999999 555432  333     47889999999999999999999999999976      4578999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.++...|++||+|++.|++.++.|++++||+|++|+||+++|++.....+..         ...+ ....++.+++.+|
T Consensus       180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---------~~~~-~~~~~~~~~~~~p  249 (281)
T 3ppi_A          180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEA---------LAKF-AANIPFPKRLGTP  249 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHH---------HHHH-HHTCCSSSSCBCH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHH---------HHHH-HhcCCCCCCCCCH
Confidence            99999999999999999999999999999999999999999999976643211         1111 2223333789999


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+|+++++|+++  .+++|++|.+|||+...
T Consensus       250 edvA~~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          250 DEFADAAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHHcC--CCcCCcEEEECCCcccC
Confidence            9999999999974  69999999999998764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.6e-45  Score=311.77  Aligned_cols=244  Identities=27%  Similarity=0.378  Sum_probs=209.5

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +..++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++.    . ...+.++.+|++|.++++++++++.+.
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL----N-LPNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT----C-CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh----h-cCCceEEEecCCCHHHHHHHHHHHHHH
Confidence            44568899999999999999999999999999999999997765432    1 136788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++|
T Consensus        85 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  162 (266)
T 3p19_A           85 YGPADAIVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGT  162 (266)
T ss_dssp             HCSEEEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHH
Confidence            9999999999999765  78899999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|++.++.|++++||+||+|+||+++|++..........        ..+ .....+.+++++|+|+|+++++|+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~--------~~~-~~~~~~~~r~~~pedvA~av~~l~  233 (266)
T 3p19_A          163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIK--------DGY-DAWRVDMGGVLAADDVARAVLFAY  233 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHH--------HHH-HHHHHHTTCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhh--------HHH-HhhcccccCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999997765432111        011 111123488999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +.....++++.+....+...
T Consensus       234 ~~~~~~~~~~i~i~p~~~~~  253 (266)
T 3p19_A          234 QQPQNVCIREIALAPTKQQP  253 (266)
T ss_dssp             HSCTTEEEEEEEEEETTCCC
T ss_pred             cCCCCccceeeEEecCCCCC
Confidence            99998999998887766543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-45  Score=311.39  Aligned_cols=242  Identities=26%  Similarity=0.360  Sum_probs=201.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. ..++.++.||++++++++++++++.+.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999999999999999999888887777643 357888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||+|
T Consensus        82 iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  159 (264)
T 3tfo_A           82 IDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFA  159 (264)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHH
Confidence            9999999999765  78899999999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++|++.++.|+ + ||+||+|+||+++|++...........      ..      ....+...+|+|+|+++++|+++.
T Consensus       160 l~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~------~~------~~~~~~~~~pedvA~~v~~l~s~~  225 (264)
T 3tfo_A          160 VRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMA------AM------DTYRAIALQPADIARAVRQVIEAP  225 (264)
T ss_dssp             HHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------------------CCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHH------HH------HhhhccCCCHHHHHHHHHHHhcCC
Confidence            999999999998 4 999999999999999976543221110      00      001133579999999999999999


Q ss_pred             CCCeeecEEEeCCcccccc
Q 023613          255 ARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~~  273 (280)
                      ..+.+|+++..++|..+..
T Consensus       226 ~~~~~~~i~i~p~~~~~~~  244 (264)
T 3tfo_A          226 QSVDTTEITIRPTASGNAE  244 (264)
T ss_dssp             TTEEEEEEEEEECC-----
T ss_pred             ccCccceEEEecCcccccc
Confidence            9999999999999987644

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=2.7e-44  Score=307.05  Aligned_cols=254  Identities=49%  Similarity=0.791  Sum_probs=219.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+....++.++.+|++|+++++++++++.+.+
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34688999999999999999999999999999999999988777777776544478899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-~~~~Y~~s  171 (280)
                      +++|+||||||.......++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.+ +...|+++
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~s  170 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  170 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHH
Confidence            99999999999875433577889999999999999999999999999999887789999999999988877 78899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++.++.|++++||++++|+||++.|++.....+.....      ...+......+.+++++|+|+|+++++|+
T Consensus       171 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~~~l~  244 (278)
T 2bgk_A          171 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSR------VEELAHQAANLKGTLLRAEDVADAVAYLA  244 (278)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHH------HHHHHHHTCSSCSCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhH------HHHhhhcccccccccCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999876544321111      11111222223478999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++...+++|+.+.+|||....
T Consensus       245 ~~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          245 GDESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CcccccCCCCEEEECCccccc
Confidence            988889999999999998764

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=7.4e-45  Score=308.19  Aligned_cols=249  Identities=21%  Similarity=0.245  Sum_probs=208.2

Q ss_pred             ccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..++++|++|||||+  +|||+++|++|+++|++|++++|+++ .++..+.+.. ...+.++.+|++++++++++++++.
T Consensus         3 ~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             EECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            346889999999999  99999999999999999999999875 2222222211 1236788999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023613           90 EKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  167 (280)
                      +.++++|+||||||+....  ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++...
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  159 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNV  159 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHH
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchH
Confidence            9999999999999986420  145778999999999999999999999999999964  489999999999999899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |++||++++.|++.++.|++++||+||+|+||+++|++.........        ......+. .+.+++.+|+|+|+++
T Consensus       160 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~-~p~~~~~~~~dva~~v  230 (261)
T 2wyu_A          160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTK--------MYDRVAQT-APLRRNITQEEVGNLG  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHH--------HHHHHHHH-STTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHH--------HHHHHHhc-CCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999998654321110        11111222 2348899999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ++|+++...+++|+.+.+|||+....
T Consensus       231 ~~l~s~~~~~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          231 LFLLSPLASGITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHcChhhcCCCCCEEEECCCccccC
Confidence            99999888999999999999987654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-45  Score=313.11  Aligned_cols=253  Identities=30%  Similarity=0.415  Sum_probs=202.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---CC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+   .. ..++.++.+|++++++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988887776666   32 24688899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCC----CHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc-cccCCCC
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREA----DLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-AIGGLGP  165 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-~~~~~~~  165 (280)
                      .++++|+||||||+...  .++.+.    +.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+ ..+.++.
T Consensus        83 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIP--DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HHSCCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS
T ss_pred             HcCCCCEEEECCCCCCC--cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCc
Confidence            99999999999998754  566777    9999999999999999999999999997655 99999999998 8888899


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+++|++++.|++.++.|++++||++|+|+||+++|++.................... .... .+.+++.+|+|+|+
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~-~p~~~~~~~~dvA~  237 (278)
T 1spx_A          160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT-MKEC-VPAGVMGQPQDIAE  237 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH-HHHH-CTTSSCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHH-HHhc-CCCcCCCCHHHHHH
Confidence            999999999999999999999999999999999999999865421111000000000111 1122 23488999999999


Q ss_pred             HHHHhcCCCCCC-eeecEEEeCCccccc
Q 023613          246 AVLFLASDEARY-ISGTNLMVDGGFTSV  272 (280)
Q Consensus       246 ~~~~L~s~~~~~-~~G~~i~~dgG~~~~  272 (280)
                      ++++|+++...+ ++|+.+.+|||+...
T Consensus       238 ~v~~l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          238 VIAFLADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHcCccccCcccCcEEEECCCcccc
Confidence            999999876666 999999999998653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-45  Score=307.41  Aligned_cols=232  Identities=25%  Similarity=0.381  Sum_probs=206.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCC--CCHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDV--TKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~--~~~~~~~~~~~~~~   89 (280)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  .....++.+|+  ++.++++++++++.
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999999888887776642  23566666666  99999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +.++++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.+++..|+
T Consensus        90 ~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  168 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPR-TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYG  168 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhH
Confidence            9999999999999986432 678899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++|+|+++|++.++.|+++ +||+||+|+||+++|++.....+....                   .++.+|+|+|++++
T Consensus       169 ~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~-------------------~~~~~p~dva~~~~  229 (247)
T 3i1j_A          169 VSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDENP-------------------LNNPAPEDIMPVYL  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTSCG-------------------GGSCCGGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccccCc-------------------cCCCCHHHHHHHHH
Confidence            9999999999999999987 799999999999999987654332110                   34578999999999


Q ss_pred             HhcCCCCCCeeecEEEe
Q 023613          249 FLASDEARYISGTNLMV  265 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~  265 (280)
                      ||++++..++||++|.+
T Consensus       230 ~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          230 YLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHSGGGTTCCSCEEEC
T ss_pred             HHhCchhccccCeeecC
Confidence            99999999999999986

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.2e-44  Score=307.62  Aligned_cols=248  Identities=20%  Similarity=0.236  Sum_probs=205.9

Q ss_pred             ccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      |.++++|++|||||+  +|||+++|++|+++|++|++++|+. ..++..+++.. .....++.+|++++++++++++++.
T Consensus         4 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            4 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             -CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHH
Confidence            445889999999999  9999999999999999999999987 23322222211 1234678999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCC--CCCCCC-CCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           90 EKFGTLDIMVNNAGISGAP--CPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      +.++++|+||||||+....  ..++.+ .+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.+++.
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  160 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYN  160 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTT
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCch
Confidence            9999999999999986420  145666 899999999999999999999999999964  58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|+++|++++.|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|++
T Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~-~p~~~~~~~~dva~~  231 (265)
T 1qsg_A          161 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRK--------MLAHCEAV-TPIRRTVTIEDVGNS  231 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHH--------HHHHHHHH-STTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHH--------HHHHHHhc-CCCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999998654221110        11111222 234889999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++|+++...+++|+++.+|||+...
T Consensus       232 v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          232 AAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHhCchhcCccCCEEEECCCcCCC
Confidence            99999988899999999999998764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=5.8e-45  Score=310.64  Aligned_cols=243  Identities=28%  Similarity=0.397  Sum_probs=202.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+.++.+.+.+.. ..++.++.+|+++.++++++++++.+.++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999876 7777777766666543 35788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC---CCceEEEEccccccccCC-CCccch
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ---TKGTIISICSVAGAIGGL-GPHAYT  169 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~isS~~~~~~~~-~~~~Y~  169 (280)
                      ++|+||||||+...+ .++.+.+.++|++.+++|+.+++.+++.++|.|.+.   ..++||++||..+..+.+ ++..|+
T Consensus       104 ~id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  182 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYP-QRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA  182 (272)
T ss_dssp             CCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred             CCCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence            999999999987543 678889999999999999999999999999998763   468999999999988776 677899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|++.|++.++.|++++||+|++|+||+++|++........         ....... ..+.+++.+|+|+|+++++
T Consensus       183 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~edvA~~i~~  252 (272)
T 4e3z_A          183 ASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPD---------RAREMAP-SVPMQRAGMPEEVADAILY  252 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------------CCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChH---------HHHHHhh-cCCcCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999865421111         1111111 2234788999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcc
Q 023613          250 LASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~  269 (280)
                      |+++...+++|++|.+|||+
T Consensus       253 l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          253 LLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCCccccccCCEEeecCCC
Confidence            99999999999999999995

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.3e-45  Score=308.34  Aligned_cols=240  Identities=27%  Similarity=0.349  Sum_probs=201.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .++|++|||||++|||+++|++|++ .|+.|++++|+++..         ...+.++.+|++++++++++++.+.  +++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~   70 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIK--NVS   70 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTT--TCC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHH--hCC
Confidence            4689999999999999999999999 789999999876521         1356889999999999999996554  689


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+.  |+||++||..+..+.++...|++||+|
T Consensus        71 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa  146 (244)
T 4e4y_A           71 FDGIFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGA  146 (244)
T ss_dssp             EEEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHH
T ss_pred             CCEEEECCccCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHH
Confidence            9999999999865  788999999999999999999999999999999654  899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhh-hhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA-MVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++|++.++.|++++||+||+|+||+++|++.............. .......... ..+.+++.+|+|+|+++++|+++
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~p~dvA~~v~~l~s~  225 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEK-EFPLNRIAQPQEIAELVIFLLSD  225 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHT-TSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhh-cCCCCCCcCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999876532211100000 0001112222 33458999999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+++.+|||++.
T Consensus       226 ~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          226 KSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccccccCCeEeECCCccC
Confidence            999999999999999874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-45  Score=307.80  Aligned_cols=242  Identities=30%  Similarity=0.499  Sum_probs=203.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++. .+   .++.++.+|++++++++    ++.+.+++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~---~~~~~~~~D~~~~~~~~----~~~~~~~~   74 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY---PGIQTRVLDVTKKKQID----QFANEVER   74 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS---TTEEEEECCTTCHHHHH----HHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc---cCceEEEeeCCCHHHHH----HHHHHhCC
Confidence            578999999999999999999999999999999999987655443 22   26788999999999987    44456789


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-~~~~Y~~sK~  173 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.+ +...|+++|+
T Consensus        75 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~  152 (246)
T 2ag5_A           75 LDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA  152 (246)
T ss_dssp             CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred             CCEEEECCccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHH
Confidence            9999999998765  678889999999999999999999999999999877789999999999988877 8899999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +++.+++.++.|++++||++|+|+||+++|++............   .....+ ... .+.+++.+|+|+|+++++|+++
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~-~~~-~~~~~~~~~~dvA~~v~~l~s~  227 (246)
T 2ag5_A          153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPE---EARNDF-LKR-QKTGRFATAEEIAMLCVYLASD  227 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHH---HHHHHH-HHT-CTTSSCEEHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcH---HHHHHH-Hhc-CCCCCCCCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999998543211000000   001112 122 2348899999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      ...+++|+.+.+|||+..
T Consensus       228 ~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          228 ESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             GGTTCCSCEEEECTTGGG
T ss_pred             cccCCCCCEEEECCCccC
Confidence            889999999999999764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=3.6e-44  Score=307.78  Aligned_cols=249  Identities=23%  Similarity=0.309  Sum_probs=206.9

Q ss_pred             ccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      |.++++|++|||||+  +|||+++|+.|+++|++|++++|+.+ .++..+.+.. ...+.++.+|++++++++++++++.
T Consensus        16 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           16 MGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             -CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            345899999999999  99999999999999999999999875 2222222211 1236788999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023613           90 EKFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  167 (280)
                      +.++++|+||||||+....  ..++.+.+.++|++.+++|+.+++.++++++|.|.++ .|+||++||..+..+.++...
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  173 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNV  173 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTH
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccH
Confidence            9999999999999986420  1457789999999999999999999999999999754 599999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |++||++++.|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|+++
T Consensus       174 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~-~p~~~~~~~~dva~~~  244 (285)
T 2p91_A          174 MGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHL--------LMEHTTKV-NPFGKPITIEDVGDTA  244 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHH--------HHHHHHHH-STTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHH--------HHHHHHhc-CCCCCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999998654211110        11111222 2347899999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCccccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++|+++...+++|+++.+|||+...
T Consensus       245 ~~l~s~~~~~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          245 VFLCSDWARAITGEVVHVDNGYHIM  269 (285)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHcCCcccCCCCCEEEECCCcccc
Confidence            9999988889999999999998764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.1e-44  Score=305.63  Aligned_cols=237  Identities=24%  Similarity=0.342  Sum_probs=204.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+.. ..++.++.+|+++++++.++++.+.+.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            5568999999999999999999999999999999999999888887776643 357888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|+++
T Consensus       104 ~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (262)
T 3rkr_A          104 HGRCDVLVNNAGVGWFG-GPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTAS  182 (262)
T ss_dssp             HSCCSEEEECCCCCCCS-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCccCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHH
Confidence            99999999999984332 67889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|++.++.|++++||+|++|+||+++|++........                   +..++++|+|+|+++++|+
T Consensus       183 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------------------~~~~~~~p~dvA~~v~~l~  243 (262)
T 3rkr_A          183 KWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAKK-------------------SALGAIEPDDIADVVALLA  243 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccccc-------------------ccccCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999865432210                   1156789999999999999


Q ss_pred             CCCCCCeeecEEEeCCcc
Q 023613          252 SDEARYISGTNLMVDGGF  269 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~  269 (280)
                      ++...+++|+.+..+.|.
T Consensus       244 s~~~~~~~g~~~i~p~~~  261 (262)
T 3rkr_A          244 TQADQSFISEVLVRPTLK  261 (262)
T ss_dssp             TCCTTCCEEEEEEECCCC
T ss_pred             cCccccccCcEEeccccC
Confidence            999999999999887763

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.7e-44  Score=306.96  Aligned_cols=246  Identities=19%  Similarity=0.236  Sum_probs=207.2

Q ss_pred             ccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+.+.. ...+.++.+|++++++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999876 2222222211 123678899999999999999999999


Q ss_pred             cCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           92 FGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++|+||||||+....  ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++...|+
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  159 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMG  159 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhH
Confidence            99999999999986420  146778999999999999999999999999999964  48999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||++++.|++.++.|++++||+||+|+||+++|++.........        ........ .+.+++.+|+|+|+++++
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~p~~~~~~p~dva~~~~~  230 (275)
T 2pd4_A          160 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRM--------ILKWNEIN-APLRKNVSLEEVGNAGMY  230 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHH--------HHHHHHHH-STTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHH--------HHHHHHhc-CCcCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998654321110        11111122 234789999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+++...+++|+.+.+|||+...
T Consensus       231 l~s~~~~~~tG~~~~vdgg~~~~  253 (275)
T 2pd4_A          231 LLSSLSSGVSGEVHFVDAGYHVM  253 (275)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhCccccCCCCCEEEECCCcccC
Confidence            99988899999999999998763

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=7.3e-44  Score=300.02  Aligned_cols=245  Identities=33%  Similarity=0.512  Sum_probs=215.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++...+.+....++.++.+|++++++++++++.+.+.+++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999998888777777654467889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++. ++||++||..+..+.++...|+++|+
T Consensus        83 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (251)
T 1zk4_A           83 VSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHH
Confidence            9999999998754  67888999999999999999999999999999987766 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHC--CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          174 AVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~--~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      +++.+++.++.|++  .+||++++|+||+++|++.... +...        ....... ..+.+++.+|+|+|+++++|+
T Consensus       161 a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~--------~~~~~~~-~~~~~~~~~~~dva~~~~~l~  230 (251)
T 1zk4_A          161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGAE--------EAMSQRT-KTPMGHIGEPNDIAYICVYLA  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTHH--------HHHTSTT-TCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cchh--------hhHHHhh-cCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999998  8899999999999999987653 2110        1111111 223478999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||+..
T Consensus       231 ~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          231 SNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CcccccccCcEEEECCCccC
Confidence            98888999999999999863

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.4e-44  Score=301.21  Aligned_cols=235  Identities=30%  Similarity=0.417  Sum_probs=204.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+..   .+++.    +.++.+|+++ ++++++++++.+.++++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~----~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSLG----AVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHT----CEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhhC----cEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            78999999999999999999999999999999987653   23332    6788999999 9999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC--CCCccchhhHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--LGPHAYTGSKHAV  175 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--~~~~~Y~~sK~al  175 (280)
                      +|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.  ++...|++||+++
T Consensus        74 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           74 LVHAAAVNVR--KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL  151 (239)
T ss_dssp             EEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence            9999998754  77889999999999999999999999999999987778999999999998887  8889999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      +.|++.++.|++++||++|+|+||+++|++........       .....+ ... .+.+++.+|+|+|+++++|+++..
T Consensus       152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~-~~~-~p~~~~~~~~dvA~~~~~l~s~~~  222 (239)
T 2ekp_A          152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNP-------ELYEPI-TAR-IPMGRWARPEEIARVAAVLCGDEA  222 (239)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH-------HHHHHH-HTT-CTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCH-------HHHHHH-Hhc-CCCCCCcCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999999865321000       001111 122 234889999999999999999988


Q ss_pred             CCeeecEEEeCCcccc
Q 023613          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .+++|+.+.+|||+..
T Consensus       223 ~~~tG~~~~vdgG~~~  238 (239)
T 2ekp_A          223 EYLTGQAVAVDGGFLA  238 (239)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             cCCCCCEEEECCCccc
Confidence            9999999999999754

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.3e-44  Score=306.86  Aligned_cols=237  Identities=24%  Similarity=0.310  Sum_probs=191.3

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  .++.++.+|++|+++++++++++.+.
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~   99 (272)
T 4dyv_A           22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG--DDALCVPTDVTDPDSVRALFTATVEK   99 (272)
T ss_dssp             ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT--SCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999999998888888775  56788999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--CceEEEEccccccccCCCCccch
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++|+||||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++  .|+||++||..+..+.++...|+
T Consensus       100 ~g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  178 (272)
T 4dyv_A          100 FGRVDVLFNNAGTGAPA-IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYT  178 (272)
T ss_dssp             HSCCCEEEECCCCCCCS-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHH
Confidence            99999999999986432 6788999999999999999999999999999998765  68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|+++|++.++.|++++||+||+|+||+++|++...........           . ...+.+++.+|+|+|++++|
T Consensus       179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-----------~-~~~~~~~~~~pedvA~~v~f  246 (272)
T 4dyv_A          179 ATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQA-----------D-LSIKVEPVMDVAHVASAVVY  246 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------------------CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhh-----------h-hcccccCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999976543221110           0 01223678999999999999


Q ss_pred             hcCCCCCCeeecEE
Q 023613          250 LASDEARYISGTNL  263 (280)
Q Consensus       250 L~s~~~~~~~G~~i  263 (280)
                      |++.......++..
T Consensus       247 L~s~~~~~~~~~i~  260 (272)
T 4dyv_A          247 MASLPLDANVQFMT  260 (272)
T ss_dssp             HHHSCTTSCCCEEE
T ss_pred             HhCCCCcCccceEE
Confidence            99976554444443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3e-44  Score=308.21  Aligned_cols=245  Identities=27%  Similarity=0.422  Sum_probs=211.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++|++|||||++|||+++|+.|+++|++|++++|+.+.+++..+.+.. ..++.++.+|++|.++++++++++.+.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            4568899999999999999999999999999999999998877777666643 357888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|+++
T Consensus       119 ~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as  196 (285)
T 2c07_A          119 HKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS  196 (285)
T ss_dssp             CSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHH
Confidence            9999999999998755  67888999999999999999999999999999987777999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++.++.|++++||++++|+||+++|++.....+.          ........ .+.+++.+|+|+|+++++|+
T Consensus       197 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~dvA~~~~~l~  265 (285)
T 2c07_A          197 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ----------IKKNIISN-IPAGRMGTPEEVANLACFLS  265 (285)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH----------HHHHHHTT-CTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHH----------HHHHHHhh-CCCCCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986542210          11111112 23478999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccc
Q 023613          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++...+++|+.+.+|||+.
T Consensus       266 ~~~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          266 SDKSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CCCcCCCCCCEEEeCCCcc
Confidence            9888899999999999975

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=3.5e-45  Score=320.18  Aligned_cols=253  Identities=19%  Similarity=0.217  Sum_probs=206.5

Q ss_pred             CCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCc---------chHHHHHHHhCC----CCCeEEEecCCCCH--H
Q 023613           17 VGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQD---------NLGQQVCQSLGG----EPDTFFCHCDVTKE--E   79 (280)
Q Consensus        17 ~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~----~~~~~~~~~D~~~~--~   79 (280)
                      .+|++|||||++  |||+++|++|+++|++|++++|++         +.++...+....    ...+.++.||+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            379999999986  999999999999999999777654         222222222221    13467888999888  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHh
Q 023613           80 ------------------DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI  141 (280)
Q Consensus        80 ------------------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  141 (280)
                                        +++++++++.+.++++|+||||||+......++.+.+.++|++.+++|+.+++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999985433378999999999999999999999999999999


Q ss_pred             cccCCCceEEEEccccccccCCCCc-cchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCeeeccccccCCCchhh----
Q 023613          142 MIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEER----  215 (280)
Q Consensus       142 l~~~~~~~iv~isS~~~~~~~~~~~-~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~T~~~~~~~~~~~~----  215 (280)
                      |.++  |+||++||..+..+.+++. .|++||+|+.+|+++++.|+++ +||+||+|+||+++|++..........    
T Consensus       161 m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  238 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC---------
T ss_pred             HhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccc
Confidence            9764  9999999999999999986 9999999999999999999998 899999999999999998765321100    


Q ss_pred             ---------------------hh----------hhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEE
Q 023613          216 ---------------------TE----------DAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLM  264 (280)
Q Consensus       216 ---------------------~~----------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~  264 (280)
                                           ..          ...+.+....... .+.+++.+|+|+|++++||+++...++||++|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~  317 (329)
T 3lt0_A          239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKY-APLRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHH-SSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             ccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhc-CcccCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence                                 00          0000012222233 344999999999999999999999999999999


Q ss_pred             eCCccccc
Q 023613          265 VDGGFTSV  272 (280)
Q Consensus       265 ~dgG~~~~  272 (280)
                      +|||++..
T Consensus       318 vdGG~~~~  325 (329)
T 3lt0_A          318 VDNGLNIM  325 (329)
T ss_dssp             ESTTGGGC
T ss_pred             EcCCeeEE
Confidence            99999874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4e-44  Score=299.15  Aligned_cols=226  Identities=18%  Similarity=0.175  Sum_probs=192.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.  .++.++.+|++++++++++++++.+.++++|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG--NAVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            57999999999999999999999999999999999998888877774  2588899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ ++||++||..+..+.++...|++||+|++
T Consensus        80 ~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~  156 (235)
T 3l6e_A           80 LVLHCAGTGEF--GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMR  156 (235)
T ss_dssp             EEEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHH
Confidence            99999999754  7888999999999999999999999999999997655 59999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC-CCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS-DEA  255 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s-~~~  255 (280)
                      +|++.++.|++++||+||+|+||+++|++.......                    ..+++.+|+|+|+++++|++ +..
T Consensus       157 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--------------------~~~~~~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          157 GFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHV--------------------DPSGFMTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             HHHHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred             HHHHHHHHHhhccCCEEEEEeCCCccCcchhccCCC--------------------CCcCCCCHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999986543210                    11578899999999999998 556


Q ss_pred             CCeeecEEEeCC
Q 023613          256 RYISGTNLMVDG  267 (280)
Q Consensus       256 ~~~~G~~i~~dg  267 (280)
                      .+++|-.+.=..
T Consensus       217 ~~i~~i~~~~~~  228 (235)
T 3l6e_A          217 CHVTDLFIGRNE  228 (235)
T ss_dssp             EEEEEEEEEECC
T ss_pred             cceeeEEEecCC
Confidence            677776655433

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.1e-43  Score=298.66  Aligned_cols=237  Identities=28%  Similarity=0.401  Sum_probs=205.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.. ..++.++.+|++|+++++++++++.+.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999998888777666532 34788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.++...|+++|+
T Consensus        84 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  160 (247)
T 2jah_A           84 GLDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKF  160 (247)
T ss_dssp             CCSEEEECCCCCCC--CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHH
Confidence            99999999998754  7788999999999999999999999999999998766 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCC--CCHHHHHHHHHHhc
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE--LTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~L~  251 (280)
                      ++++|++.++.|++++||+||+|+||+++|++....... . .       .......  + +++  .+|+|+|+++++|+
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~-~-------~~~~~~~--~-~~~~~~~pedvA~~v~~l~  228 (247)
T 2jah_A          161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHT-A-T-------KEMYEQR--I-SQIRKLQAQDIAEAVRYAV  228 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCH-H-H-------HHHHHHH--T-TTSCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccch-h-h-------HHHHHhc--c-cccCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999986543221 1 0       0111111  1 344  89999999999999


Q ss_pred             CCCCCCeeecEEEeCC
Q 023613          252 SDEARYISGTNLMVDG  267 (280)
Q Consensus       252 s~~~~~~~G~~i~~dg  267 (280)
                      ++...+++++. .+++
T Consensus       229 s~~~~~~~~~i-~i~~  243 (247)
T 2jah_A          229 TAPHHATVHEI-FIRP  243 (247)
T ss_dssp             HSCTTEEEEEE-EEEE
T ss_pred             CCCccCccceE-EecC
Confidence            98888888775 4443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.2e-43  Score=301.07  Aligned_cols=245  Identities=31%  Similarity=0.473  Sum_probs=208.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.  .++.++.+|++++++++++++++.+.++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--NNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            35889999999999999999999999999999999999888887777764  4688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCC------CCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC------CCceEEEEcccccccc
Q 023613           94 TLDIMVNNAGISGAPCPDIR------EADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIG  161 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~  161 (280)
                      ++|+||||||+...  .++.      +.+.++|++.+++|+.+++.++++++|.|.++      +.++||++||..+..+
T Consensus        86 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  163 (265)
T 2o23_A           86 RVDVAVNCAGIAVA--SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  163 (265)
T ss_dssp             CCCEEEECCCCCCC--CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             CCCEEEECCccCCC--CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence            99999999998754  3333      37899999999999999999999999999877      5789999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHH
Q 023613          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      .++...|+++|++++.+++.++.|++++||++++|+||+++|++.....+.          .........+..+++.+|+
T Consensus       164 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~  233 (265)
T 2o23_A          164 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK----------VCNFLASQVPFPSRLGDPA  233 (265)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------------CHHHHTCSSSCSCBCHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH----------HHHHHHHcCCCcCCCCCHH
Confidence            999999999999999999999999999999999999999999986542111          0111112222227889999


Q ss_pred             HHHHHHHHhcCCCCCCeeecEEEeCCccccccc
Q 023613          242 DVANAVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       242 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      |+|+++++|++  ..+++|+.+.+|||++...+
T Consensus       234 dva~~~~~l~~--~~~~~G~~i~vdgG~~~~~~  264 (265)
T 2o23_A          234 EYAHLVQAIIE--NPFLNGEVIRLDGAIRMQPG  264 (265)
T ss_dssp             HHHHHHHHHHH--CTTCCSCEEEESTTCCCCCC
T ss_pred             HHHHHHHHHhh--cCccCceEEEECCCEecCCC
Confidence            99999999995  46899999999999987544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=5.3e-44  Score=302.66  Aligned_cols=248  Identities=32%  Similarity=0.463  Sum_probs=213.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++++|++|||||++|||++++++|+++|++|++++| +.+..+++.+.+.. ..++.++.+|++++++++++++++.+
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999 77666666555532 24678899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccch
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+
T Consensus        82 ~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (261)
T 1gee_A           82 EFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHH
Confidence            99999999999998754  6778899999999999999999999999999998776 78999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|++++.+++.++.|++++||++++|+||+++|++.........        ........ .+.+++.+|+|+|+++++
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~~~~  230 (261)
T 1gee_A          160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPE--------QRADVESM-IPMGYIGEPEEIAAVAAW  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHH--------HHHHHHTT-CTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChh--------HHHHHHhc-CCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999998654211100        11111122 234789999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+.+.+|||+..
T Consensus       231 l~~~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          231 LASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCccccCCCCcEEEEcCCccc
Confidence            9998888999999999999875

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-44  Score=307.56  Aligned_cols=244  Identities=25%  Similarity=0.341  Sum_probs=199.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..  ...+.++.+|++|+++++++++++.+.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999888877766642  123588999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--CceEEEEccccccccCCCCccch
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++|+||||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++  .|+||++||..+..+.++...|+
T Consensus       109 ~g~iD~lvnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  187 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPP-VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT  187 (281)
T ss_dssp             HSCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHH
Confidence            99999999999986432 6788999999999999999999999999999998765  68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.....+.....           . ...+.+++.+|+|+|++++|
T Consensus       188 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-----------~-~~~~~~~~~~pedvA~~v~f  255 (281)
T 4dry_A          188 ATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQA-----------N-GEVAAEPTIPIEHIAEAVVY  255 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECT-----------T-SCEEECCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhh-----------h-hcccccCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999976543321110           0 11123678999999999999


Q ss_pred             hcCCCCC-CeeecEEEeCCccc
Q 023613          250 LASDEAR-YISGTNLMVDGGFT  270 (280)
Q Consensus       250 L~s~~~~-~~~G~~i~~dgG~~  270 (280)
                      |++.... .+++..+.-....+
T Consensus       256 L~s~~~~~~i~~~~i~p~~~~~  277 (281)
T 4dry_A          256 MASLPLSANVLTMTVMATRMPL  277 (281)
T ss_dssp             HHHSCTTEEEEEEEEEETTSSC
T ss_pred             HhCCCccCccccEEEEeccccc
Confidence            9996544 55666665555443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.3e-43  Score=296.78  Aligned_cols=243  Identities=35%  Similarity=0.555  Sum_probs=211.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh-CC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL-GG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+ .. ..++.++.+|++++++++++++++.+.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999988887777666 32 2468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCC---CCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           96 DIMVNNAGISGAPCPD---IREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        96 d~li~~ag~~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |+||||||+...  .+   +.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|
T Consensus        82 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           82 DVLVNNAGITGN--SEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CEEEECCCCCCC--TTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CEEEECCCCCCC--CCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHH
Confidence            999999998654  44   7788999999999999999999999999999877779999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.|++++||++++++||+++|++.........        +....... .+.+++.+|+|+|+++++|++
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~dva~~~~~l~~  230 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPE--------LRDQVLAR-IPQKEIGTAAQVADAVMFLAG  230 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHH--------HHHHHHTT-CTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHH--------HHHHHHhc-CCCCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999998654211110        11111122 234789999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +...+++|+.+.+|||+..
T Consensus       231 ~~~~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          231 EDATYVNGAALVMDGAYTA  249 (250)
T ss_dssp             TTCTTCCSCEEEESTTGGG
T ss_pred             chhhcccCCEEEECCceec
Confidence            8888999999999999763

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1e-43  Score=301.27  Aligned_cols=247  Identities=30%  Similarity=0.472  Sum_probs=208.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--------CCeEEEecCCCCHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--------PDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~   84 (280)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+...        .++.++.+|++++++++++
T Consensus         2 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            34578999999999999999999999999999999999988877776655421        4678899999999999999


Q ss_pred             HHHHHHHcCCc-cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccC
Q 023613           85 VDLTVEKFGTL-DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGG  162 (280)
Q Consensus        85 ~~~~~~~~~~~-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~  162 (280)
                      ++.+.+.++++ |+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  159 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGITQD--EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN  159 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC
T ss_pred             HHHHHHHhCCCCeEEEECCCcCCC--cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC
Confidence            99999999998 999999998755  6788899999999999999999999999999997765 6899999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ++...|+++|++++.+++.++.|++++||++++|+||++.|++.....+.          +....... .+.+++.+|+|
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~d  228 (264)
T 2pd6_A          160 VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQK----------VVDKITEM-IPMGHLGDPED  228 (264)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------------CTGGG-CTTCSCBCHHH
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHH----------HHHHHHHh-CCCCCCCCHHH
Confidence            99999999999999999999999999999999999999999986542111          00111111 23378899999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+++++|+++...+++|+.+.+|||+...
T Consensus       229 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          229 VADVVAFLASEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC---
T ss_pred             HHHHHHHHcCCcccCCCCCEEEECCCceec
Confidence            999999999988889999999999998764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5.2e-44  Score=303.61  Aligned_cols=247  Identities=27%  Similarity=0.379  Sum_probs=191.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+.. ..++.++.+|++++++++++++++.+.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            458899999999999999999999999999999999998877776665532 2468889999999999999999999999


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 -GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+.+.++||++||..+..+.++...|+++
T Consensus        90 ~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  167 (266)
T 1xq1_A           90 GGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT  167 (266)
T ss_dssp             TTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred             CCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHH
Confidence             899999999998754  67788999999999999999999999999999987777999999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++.++.|++++||++++|+||++.|++........         +....... .+.+++.+|+|+|+++++|+
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l~  237 (266)
T 1xq1_A          168 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---------FKKVVISR-KPLGRFGEPEEVSSLVAFLC  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------CCGGGGHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHH---------HHHHHHhc-CCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999865432110         00111111 23378899999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++...+++|+.+.+|||+...
T Consensus       238 ~~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          238 MPAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             SGGGTTCCSCEEECCCCEEET
T ss_pred             CccccCccCcEEEEcCCcccc
Confidence            988889999999999998764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.2e-43  Score=321.90  Aligned_cols=242  Identities=26%  Similarity=0.343  Sum_probs=206.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+..  .+++..+..    .+.++.||++|.++++++++++.+.
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~~  284 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV----GGTALTLDVTADDAVDKITAHVTEH  284 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999643  333333333    3468899999999999999999999


Q ss_pred             cCC-ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           92 FGT-LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~-~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++ +|+||||||+...  ..+.+.+.++|++.+++|+.+++++.+++.+.|.+++.++||++||..+..+.+++..|++
T Consensus       285 ~g~~id~lV~nAGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~Yaa  362 (454)
T 3u0b_A          285 HGGKVDILVNNAGITRD--KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYAT  362 (454)
T ss_dssp             STTCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHH
T ss_pred             cCCCceEEEECCcccCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHH
Confidence            976 9999999999876  7889999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+++++|++.++.|++++||+||+|+||+++|+|.........          ....+ ..+.+++.+|+|+|++++||
T Consensus       363 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~----------~~~~~-~~~l~r~g~pedvA~~v~fL  431 (454)
T 3u0b_A          363 TKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR----------EVGRR-LNSLFQGGQPVDVAELIAYF  431 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C----------HHHHH-SBTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH----------HHHHh-hccccCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999765322111          11112 22347889999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +++...++||++|.+|||....
T Consensus       432 ~s~~a~~itG~~i~vdGG~~lG  453 (454)
T 3u0b_A          432 ASPASNAVTGNTIRVCGQAMLG  453 (454)
T ss_dssp             HCGGGTTCCSCEEEESSSBSCC
T ss_pred             hCCccCCCCCcEEEECCccccc
Confidence            9999999999999999998753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=3.1e-43  Score=297.65  Aligned_cols=249  Identities=34%  Similarity=0.457  Sum_probs=213.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+.. ..++.++.+|++|+++++++++++.+.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999998777666655532 347889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC--ccch
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYT  169 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~  169 (280)
                      ++++|+||||||+.... .++.+.+.++|++.+++|+.+++.+++++.|.|.+++.++||++||..+..+.++.  ..|+
T Consensus        88 ~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~  166 (260)
T 3awd_A           88 EGRVDILVACAGICISE-VKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN  166 (260)
T ss_dssp             HSCCCEEEECCCCCCCS-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             cCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence            99999999999987521 67888999999999999999999999999999987778999999999998887776  8999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|++++.+++.++.|++++||++++|+||+++|++.........       ....+. .. .+.+++.+|+|+|+++++
T Consensus       167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-------~~~~~~-~~-~~~~~~~~~~dva~~~~~  237 (260)
T 3awd_A          167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPE-------LYDAWI-AG-TPMGRVGQPDEVASVVQF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHH-------HHHHHH-HT-CTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChH-------HHHHHH-hc-CCcCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999998652111110       011121 12 234789999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+.+.+|||+..
T Consensus       238 l~~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          238 LASDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTT
T ss_pred             HhCchhccCCCcEEEECCceec
Confidence            9998888999999999999753

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-43  Score=304.47  Aligned_cols=263  Identities=26%  Similarity=0.345  Sum_probs=216.2

Q ss_pred             CCCCCCCCCCccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC------CCCeEEEecC
Q 023613            1 MSNSNSTDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG------EPDTFFCHCD   74 (280)
Q Consensus         1 m~~~~~~~~~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~D   74 (280)
                      |++.+......+...+++|++|||||++|||+++|++|+++|++|++++|+.+.++...+++..      ..++.++.+|
T Consensus         1 ~~~~~~~~~~~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D   80 (303)
T 1yxm_A            1 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN   80 (303)
T ss_dssp             ------CCCSBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECC
T ss_pred             CccccccCCccCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecC
Confidence            5555555554555678999999999999999999999999999999999998877776665532      3578899999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           75 VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ++++++++++++.+.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.+.++..++||++|
T Consensus        81 ~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~is  158 (303)
T 1yxm_A           81 IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNII  158 (303)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence            999999999999999999999999999997654  677889999999999999999999999999976655579999999


Q ss_pred             cccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCC
Q 023613          155 SVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       155 S~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                      |.. ..+.+....|+++|+++..+++.++.|++++||++++|+||+++|++..........     .....+ .. ..+.
T Consensus       159 S~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-----~~~~~~-~~-~~p~  230 (303)
T 1yxm_A          159 VPT-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ-----SFFEGS-FQ-KIPA  230 (303)
T ss_dssp             CCC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGG-----GGGTTG-GG-GSTT
T ss_pred             eec-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccch-----HHHHHH-Hh-cCcc
Confidence            998 778888899999999999999999999999999999999999999964322211000     001111 11 1234


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccccc
Q 023613          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       235 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +++.+|+|+|+++++|+++...+++|+.+.+|||.....
T Consensus       231 ~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          231 KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeeccc
Confidence            789999999999999999888899999999999987653

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.2e-43  Score=298.02  Aligned_cols=244  Identities=30%  Similarity=0.461  Sum_probs=212.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+.+..  ..++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999999998877766555432  346888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++
T Consensus        83 ~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  160 (248)
T 2pnf_A           83 VDGIDILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTT  160 (248)
T ss_dssp             SSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHH
Confidence            9999999999998754  67788999999999999999999999999999987777999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++.++.|++++||++++++||+++|++.... +..         ........ .+.+++.+|+|+|+++++|+
T Consensus       161 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-~~~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l~  229 (248)
T 2pnf_A          161 KAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-SEE---------IKQKYKEQ-IPLGRFGSPEEVANVVLFLC  229 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CHH---------HHHHHHHT-CTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-cHH---------HHHHHHhc-CCCCCccCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986542 110         11111111 23378899999999999999


Q ss_pred             CCCCCCeeecEEEeCCccc
Q 023613          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++...+++|+.+.+|||+.
T Consensus       230 ~~~~~~~~G~~~~v~gg~~  248 (248)
T 2pnf_A          230 SELASYITGEVIHVNGGMF  248 (248)
T ss_dssp             SGGGTTCCSCEEEESTTCC
T ss_pred             CchhhcCCCcEEEeCCCcC
Confidence            9877899999999999963

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=5.3e-44  Score=302.54  Aligned_cols=245  Identities=18%  Similarity=0.230  Sum_probs=205.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHH---cCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHK---HGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~---~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .++++|++|||||++|||+++|++|++   +|++|++++|+.+.+++..+++..   ..++.++.+|+++++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            357899999999999999999999999   899999999998888777666532   34688899999999999999999


Q ss_pred             HHH--HcCCcc--EEEECCCCCCCCCCCCCC-CCHHHHHHHhhhhhHhHHHHHHHHHHhcccC--CCceEEEEccccccc
Q 023613           88 TVE--KFGTLD--IMVNNAGISGAPCPDIRE-ADLSEFEKVFDINVKGVFHGMKHAARIMIPQ--TKGTIISICSVAGAI  160 (280)
Q Consensus        88 ~~~--~~~~~d--~li~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS~~~~~  160 (280)
                      +.+  .++++|  +||||||+......++.+ .+.++|++.+++|+.+++.++++++|.|.++  +.|+||++||..+..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence            988  668899  999999986432245667 7899999999999999999999999999876  569999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.++...|++||+|+++|++.++.|+++  |+||+|+||+++|++.......... .   . ......... +.+++.+|
T Consensus       162 ~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~-~---~-~~~~~~~~~-p~~~~~~p  233 (259)
T 1oaa_A          162 PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKD-P---E-LRSKLQKLK-SDGALVDC  233 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSC-H---H-HHHHHHHHH-HTTCSBCH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCC-h---h-HHHHHHHhh-hcCCcCCH
Confidence            9999999999999999999999999974  9999999999999986542110000 0   0 111111222 23789999


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCC
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      +|+|+++++|+++ .+++||+++.+||
T Consensus       234 ~dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          234 GTSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHHHHHHhh-ccccCCcEEeccC
Confidence            9999999999985 6899999999986

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-43  Score=300.71  Aligned_cols=248  Identities=27%  Similarity=0.382  Sum_probs=209.8

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ....++++|++|||||++|||++++++|+++|++|++++|+.+......+.+..  ..++.++.+|++|+++++++++++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   86 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   86 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH
Confidence            344568999999999999999999999999999999999976655444443321  246888999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCC---
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLG---  164 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~---  164 (280)
                      .+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.+.   
T Consensus        87 ~~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  164 (265)
T 1h5q_A           87 DADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  164 (265)
T ss_dssp             HHHSCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHhcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccc
Confidence            9999999999999998765  6788899999999999999999999999999987655 489999999988766542   


Q ss_pred             ----CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          165 ----PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       165 ----~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                          ...|+++|++++.+++.++.|++++||++++|+||+++|++.....+.          ....... ..+.+++.+|
T Consensus       165 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~-~~~~~~~~~~  233 (265)
T 1h5q_A          165 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK----------IRDHQAS-NIPLNRFAQP  233 (265)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH----------HHHHHHH-TCTTSSCBCG
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchh----------HHHHHHh-cCcccCCCCH
Confidence                678999999999999999999999999999999999999987653211          1111111 2234789999


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+|+++++|+++...+++|+.+.+|||+..
T Consensus       234 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          234 EEMTGQAILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence            9999999999998888999999999999753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=2.3e-43  Score=297.49  Aligned_cols=245  Identities=33%  Similarity=0.467  Sum_probs=212.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCe-EEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT-FFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+.  .++ .++.+|++|+++++++++++.+ 
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG--AAVAARIVADVTDAEAMTAAAAEAEA-   82 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--ccceeEEEEecCCHHHHHHHHHHHHh-
Confidence            346889999999999999999999999999999999999887777766663  355 7889999999999999999988 


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC--ccch
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYT  169 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~  169 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+..  ..|+
T Consensus        83 ~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~  160 (254)
T 2wsb_A           83 VAPVSILVNSAGIARL--HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYM  160 (254)
T ss_dssp             HSCCCEEEECCCCCCC--BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHH
T ss_pred             hCCCcEEEECCccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHH
Confidence            8999999999998765  67888999999999999999999999999999988778999999999998887777  8999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|++++.+++.++.|++++||++++|+||+++|++........       .....+. +. .+.+++.+|+|+|+++++
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~~-~~-~~~~~~~~~~dva~~~~~  231 (254)
T 2wsb_A          161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERP-------ELFETWL-DM-TPMGRCGEPSEIAAAALF  231 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCH-------HHHHHHH-HT-STTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccCh-------HHHHHHH-hc-CCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999865321110       0011121 22 234789999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+.+.+|||+..
T Consensus       232 l~~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          232 LASPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhCcccccccCCEEEECCCEec
Confidence            9998888999999999999753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.1e-43  Score=302.60  Aligned_cols=245  Identities=22%  Similarity=0.364  Sum_probs=201.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+++ |++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....++.++.+|++|+++++++++++.+.+
T Consensus        17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            34566 99999999999999999999999999999999998888877777543578889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCc-eEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|+||||||+.... .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.| +||++||..+..+.++...|+++
T Consensus        96 g~iD~lvnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~as  174 (272)
T 2nwq_A           96 ATLRGLINNAGLALGT-DPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT  174 (272)
T ss_dssp             SSCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHH
Confidence            9999999999986421 678889999999999999999999999999999877778 99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.|++.++.|++++||+||+|+||+++|++...........      .......     ....+|+|+|+++++|+
T Consensus       175 Kaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~------~~~~~~~-----~~~~~pedvA~~v~~l~  243 (272)
T 2nwq_A          175 KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQAR------YDKTYAG-----AHPIQPEDIAETIFWIM  243 (272)
T ss_dssp             HHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------------C-----CCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHH------HHHhhcc-----CCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999865322111000      0011100     23579999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++ ..+++|+.+.+|+|...
T Consensus       244 s~-~~~~~g~~i~v~~~~~~  262 (272)
T 2nwq_A          244 NQ-PAHLNINSLEIMPVSQS  262 (272)
T ss_dssp             TS-CTTEEEEEEEEEETTEE
T ss_pred             CC-CccCccceEEEeeccCc
Confidence            86 56899999999998543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=2e-43  Score=292.58  Aligned_cols=221  Identities=23%  Similarity=0.290  Sum_probs=190.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+                   +|++|+++++++++++    +
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------~D~~~~~~v~~~~~~~----g   58 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------LDISDEKSVYHYFETI----G   58 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------CCTTCHHHHHHHHHHH----C
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------cCCCCHHHHHHHHHHh----C
Confidence            4578999999999999999999999999999999999765                   8999999999888754    8


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++...|+++|+
T Consensus        59 ~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~  135 (223)
T 3uce_A           59 AFDHLIVTAGSYAPA-GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINA  135 (223)
T ss_dssp             SEEEEEECCCCCCCC-SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCC-CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHH
Confidence            999999999987432 78899999999999999999999999999999965  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      ++++|++.++.|+++  |+||+|+||+++|++.....+....      ......... .+.+++.+|+|+|+++++|++ 
T Consensus       136 a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~dvA~~~~~l~~-  205 (223)
T 3uce_A          136 AIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRD------AMYQRTQSH-LPVGKVGEASDIAMAYLFAIQ-  205 (223)
T ss_dssp             HHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHH------HHHHHHHHH-STTCSCBCHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHH------HHHHHHhhc-CCCCCccCHHHHHHHHHHHcc-
Confidence            999999999999987  9999999999999997654432111      111122222 344899999999999999997 


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                       ..+++|+++.+|||+..
T Consensus       206 -~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          206 -NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             -CTTCCSCEEEESTTGGG
T ss_pred             -CCCCCCcEEEecCCeec
Confidence             47999999999999875

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.9e-43  Score=293.73  Aligned_cols=230  Identities=23%  Similarity=0.272  Sum_probs=204.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.  ...++.++.+|++++++++++++++.+.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47999999999999999999999999999999999988887766653  2357889999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.| ++..+++|+++|..+..+.++...|+++|++
T Consensus        81 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  157 (235)
T 3l77_A           81 VDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL-KRTGGLALVTTSDVSARLIPYGGGYVSTKWA  157 (235)
T ss_dssp             CSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH-HHHTCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCccccc--cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcEEEEecchhcccCCCcchHHHHHHH
Confidence            9999999999765  788999999999999999999999999999999 4456899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++|++.++.+  .+||+||+|+||+++|++..........                   .++.+|+|+|+++++|+++.
T Consensus       158 ~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~-------------------~~~~~p~dva~~v~~l~~~~  216 (235)
T 3l77_A          158 ARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKPKE-------------------KGYLKPDEIAEAVRCLLKLP  216 (235)
T ss_dssp             HHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCCCGG-------------------GTCBCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHhhc--CCCeEEEEEeCCccccccccccCCcccc-------------------cCCCCHHHHHHHHHHHHcCC
Confidence            99999999444  6789999999999999997654432110                   35789999999999999999


Q ss_pred             CCCeeecEEEeCCccc
Q 023613          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+.+..|+|..
T Consensus       217 ~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          217 KDVRVEELMLRSVYQR  232 (235)
T ss_dssp             TTCCCCEEEECCTTSC
T ss_pred             CCCccceEEEeecccC
Confidence            9999999999999974

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.3e-43  Score=297.88  Aligned_cols=243  Identities=30%  Similarity=0.507  Sum_probs=189.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|++|||||++|||++++++|+++|++|+++ .|+++.+++..+.+.. ..++.++.+|++|+++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4679999999999999999999999999999998 6676666665555432 3578889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|
T Consensus        82 ~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  159 (247)
T 2hq1_A           82 GRIDILVNNAGITRD--TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK  159 (247)
T ss_dssp             SCCCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence            999999999998754  667788899999999999999999999999999877779999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ++++.+++.++.|++.+||++++++||+++|++.... +..         ........ .+.+++.+|+|+|+++++|++
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l~~  228 (247)
T 2hq1_A          160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL-PDK---------VKEMYLNN-IPLKRFGTPEEVANVVGFLAS  228 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-CHH---------HHHHHHTT-STTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc-chH---------HHHHHHhh-CCCCCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999986542 111         11111111 234789999999999999999


Q ss_pred             CCCCCeeecEEEeCCccc
Q 023613          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      +...+++|+.+++|||+.
T Consensus       229 ~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          229 DDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             GGGTTCCSCEEEESTTC-
T ss_pred             cccccccCcEEEeCCCcc
Confidence            888899999999999975

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=7.6e-43  Score=294.34  Aligned_cols=246  Identities=31%  Similarity=0.504  Sum_probs=213.3

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.. ..++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3458899999999999999999999999999999999998877766665532 246888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||....  .++ +.+.++|++.+++|+.+++.++++++|.|.+.+.++||++||..+..+.++...|+++
T Consensus        86 ~~~~d~vi~~Ag~~~~--~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  162 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_dssp             HSSCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence            9999999999998754  445 7889999999999999999999999999987777999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++.++.|++.+||++++++||++.|++........         +....... .+.+++.+|+|+|+++++|+
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l~  232 (255)
T 1fmc_A          163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE---------IEQKMLQH-TPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH---------HHHHHHHT-CSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChH---------HHHHHHhc-CCcccCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999876533211         11111122 23478999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||...
T Consensus       233 ~~~~~~~~G~~~~v~gg~~~  252 (255)
T 1fmc_A          233 SPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSCC
T ss_pred             CCccccCCCcEEEECCceec
Confidence            98888999999999999765

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=5.8e-43  Score=299.21  Aligned_cols=246  Identities=23%  Similarity=0.386  Sum_probs=208.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+.. ..++.++.+|+++.++++++++++.+.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999998766665544422 246888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCC-CCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--CCCCccc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIR-EADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--GLGPHAY  168 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--~~~~~~Y  168 (280)
                      ++++|+||||||+.... .++. +.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+  .++...|
T Consensus       109 ~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  187 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQ-GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPY  187 (279)
T ss_dssp             HSCCSEEEECGGGSTTC---CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHH
T ss_pred             hCCCCEEEECCcccccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccH
Confidence            99999999999986431 3455 788999999999999999999999999998777799999999998887  7788899


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|++++.+++.++.|++++| ++++|+||+++|++.... +. ..       ...+ ... .+.+++.+|+|+|++++
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~-~~-------~~~~-~~~-~p~~~~~~~~dvA~~~~  255 (279)
T 3ctm_A          188 NTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SK-DM-------KAKW-WQL-TPLGREGLTQELVGGYL  255 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CH-HH-------HHHH-HHH-STTCSCBCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-Ch-HH-------HHHH-HHh-CCccCCcCHHHHHHHHH
Confidence            9999999999999999999999 999999999999987421 11 10       1111 112 23478999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+++...+++|+.+.+|||+..
T Consensus       256 ~l~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          256 YLASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHhCccccCccCCEEEECCCeec
Confidence            99998888999999999999764

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=3.5e-43  Score=294.66  Aligned_cols=240  Identities=31%  Similarity=0.496  Sum_probs=208.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ||++|||||++|||++++++|+++|++|++ .+|+.+..+.+.+.+.. ..++.++.+|++++++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999998 48887776665555432 2467889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|+++
T Consensus        81 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (244)
T 1edo_A           81 DVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             SEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCC--cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHH
Confidence            999999998765  678889999999999999999999999999999877789999999999999989999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc-CCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SDE  254 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~-s~~  254 (280)
                      +.+++.++.|++++||++++|+||+++|++.....+.          ....... ..+.+++.+|+|+|+++++|+ ++.
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~~  227 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED----------MEKKILG-TIPLGRTGQPENVAGLVEFLALSPA  227 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH----------HHHHHHT-SCTTCSCBCHHHHHHHHHHHHHCSG
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChH----------HHHHHhh-cCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999999987543211          1111112 223478999999999999999 777


Q ss_pred             CCCeeecEEEeCCccc
Q 023613          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+.+.+|||+.
T Consensus       228 ~~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          228 ASYITGQAFTIDGGIA  243 (244)
T ss_dssp             GGGCCSCEEEESTTTT
T ss_pred             cCCcCCCEEEeCCCcc
Confidence            7899999999999975

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=8.4e-44  Score=298.81  Aligned_cols=236  Identities=18%  Similarity=0.156  Sum_probs=199.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-e--cCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIA-D--VQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +|++|||||++|||+++|++|+++|++|+++ +  |+.+.+++..+.+ ..       +|+.|+++++++++++.+.+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~-------~~~~~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PG-------TIALAEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TT-------EEECCCCCGGGHHHHHGGGSSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CC-------CcccCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999 6  9988887776665 11       1233677788889999999999


Q ss_pred             ccEEEECCCCCCCC-CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAP-CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|+||||||+.... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|+++|+
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  152 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARA  152 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHH
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHH
Confidence            99999999986420 04678899999999999999999999999999998887899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeecccc---ccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA---LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      ++++|++.++.|++++||+||+|+||+++|++.   .... ..       .....+.... .+.+++.+|+|+|+++++|
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~-------~~~~~~~~~~-~p~~r~~~pe~vA~~v~~l  223 (244)
T 1zmo_A          153 ATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWE-NN-------PELRERVDRD-VPLGRLGRPDEMGALITFL  223 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHH-HC-------HHHHHHHHHH-CTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccccccc-ch-------HHHHHHHhcC-CCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999986   3211 00       0011111102 2348899999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccc
Q 023613          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++...+++|+.+.+|||++
T Consensus       224 ~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          224 ASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HTTTTGGGTTCEEEESTTCC
T ss_pred             cCccccCccCCEEEeCCCCC
Confidence            99999999999999999964

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=8.8e-43  Score=292.28  Aligned_cols=241  Identities=28%  Similarity=0.387  Sum_probs=206.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.   ...++.+|++++++++++++    .+
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP---GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC---CCCEEEEeCCCHHHHHHHHH----Hc
Confidence            346899999999999999999999999999999999999887777666543   34567999999999888776    55


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.++...|+++
T Consensus        75 ~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 3d3w_A           75 GPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             CCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCccCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHH
Confidence            789999999998754  6788899999999999999999999999999998766 6999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++.++.|++++||++++|+||++.|++.....+....       ...+ ... .+.+++.+|+|+|+++++|+
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~-------~~~~-~~~-~~~~~~~~~~dva~~~~~l~  223 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK-------AKTM-LNR-IPLGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTH-------HHHH-HHT-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHH-------HHHH-Hhh-CCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999986543221111       1111 111 23478999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||++.
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          224 SDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            98778999999999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-43  Score=296.79  Aligned_cols=239  Identities=23%  Similarity=0.332  Sum_probs=196.1

Q ss_pred             CCCCccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023613            7 TDSSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus         7 ~~~~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ...+++..++++|++|||||++|||+++|++|+++|++|++++|+.+..+    .+   ..+.++ +|+  .++++++++
T Consensus         8 ~~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~~~~~~-~D~--~~~~~~~~~   77 (249)
T 1o5i_A            8 HHHHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---GHRYVV-CDL--RKDLDLLFE   77 (249)
T ss_dssp             --------CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---CSEEEE-CCT--TTCHHHHHH
T ss_pred             hhhhhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---CCeEEE-eeH--HHHHHHHHH
Confidence            34455667899999999999999999999999999999999999874332    22   256667 999  456666665


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        87 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      .+    .++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++..
T Consensus        78 ~~----~~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  151 (249)
T 1o5i_A           78 KV----KEVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLY  151 (249)
T ss_dssp             HS----CCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBH
T ss_pred             Hh----cCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCc
Confidence            44    489999999998754  678899999999999999999999999999999887779999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|+++|++++.|++.++.|++++||++|+|+||+++|++.....+..         ........ .+.+++.+|+|+|++
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---------~~~~~~~~-~p~~~~~~~~dvA~~  221 (249)
T 1o5i_A          152 TSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEE---------KKKQVESQ-IPMRRMAKPEEIASV  221 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHH---------HHHHHHTT-STTSSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhh---------HHHHHHhc-CCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999999999999864321110         01011122 234889999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCcccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++|+++...+++|+.+.+|||+..
T Consensus       222 i~~l~s~~~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          222 VAFLCSEKASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHcCccccCCCCCEEEECCCccc
Confidence            9999998888999999999999764

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=4.1e-43  Score=305.29  Aligned_cols=255  Identities=21%  Similarity=0.233  Sum_probs=199.7

Q ss_pred             cccccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCc-----------chHHHHHHHhCCCC---CeEEEecCC
Q 023613           12 AVQRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQD-----------NLGQQVCQSLGGEP---DTFFCHCDV   75 (280)
Q Consensus        12 ~~~~l~~k~vlItGa--~~giG~~la~~l~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~~---~~~~~~~D~   75 (280)
                      +.++++||++|||||  ++|||+++|++|+++|++|++++|++           +.+++. +.+....   ...++.+|+
T Consensus         3 ~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~   81 (315)
T 2o2s_A            3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDA   81 (315)
T ss_dssp             -CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCT
T ss_pred             CcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhccccccccccccccc
Confidence            345689999999999  89999999999999999999998753           122222 2222111   123444432


Q ss_pred             ------------C--------CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHH
Q 023613           76 ------------T--------KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM  135 (280)
Q Consensus        76 ------------~--------~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  135 (280)
                                  +        |+++++++++++.+.++++|+||||||+......++.+.+.++|++.+++|+.+++.++
T Consensus        82 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  161 (315)
T 2o2s_A           82 AFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL  161 (315)
T ss_dssp             TCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence                        3        25689999999999999999999999976422267888999999999999999999999


Q ss_pred             HHHHHhcccCCCceEEEEccccccccCCCC-ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCeeeccccccCCCch
Q 023613          136 KHAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEE  213 (280)
Q Consensus       136 ~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~T~~~~~~~~~~  213 (280)
                      ++++|.|.+  .|+||++||..+..+.+++ ..|++||+|+++|++.++.|+++ +||+||+|+||+++|++........
T Consensus       162 ~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~  239 (315)
T 2o2s_A          162 QHFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG  239 (315)
T ss_dssp             HHHSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS
T ss_pred             HHHHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc
Confidence            999999965  4899999999999888887 58999999999999999999985 8999999999999999865432111


Q ss_pred             hhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          214 ERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ....  ........... .+.+++.+|+|+|++++||+++...++||+++.+|||+...
T Consensus       240 ~~~~--~~~~~~~~~~~-~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  295 (315)
T 2o2s_A          240 EKSF--IDYAIDYSYNN-APLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAM  295 (315)
T ss_dssp             SSCH--HHHHHHHHHHH-SSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             cchh--HHHHHHHHhcc-CCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeee
Confidence            0000  00011111222 34489999999999999999998999999999999998754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=3.4e-43  Score=296.83  Aligned_cols=235  Identities=19%  Similarity=0.237  Sum_probs=199.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++...+ +.. ..++.++     |.++++++++++.+.++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            789999999999999999999999999999999887766544 321 2334433     566788889999999999999


Q ss_pred             EEECCCCC-CCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           98 MVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        98 li~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ||||||+. ..  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||++++
T Consensus        76 lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (254)
T 1zmt_A           76 LVSNDIFAPEF--QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGAC  153 (254)
T ss_dssp             EEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHH
T ss_pred             EEECCCcCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHH
Confidence            99999987 43  6788999999999999999999999999999998777899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCee---------eccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAV---------ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v---------~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      .|++.++.|++++||+||+|+||++         +|++.... +         .....+ ... .+.+++.+|+|+|+++
T Consensus       154 ~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~-~---------~~~~~~-~~~-~p~~~~~~p~dvA~~v  221 (254)
T 1zmt_A          154 TLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN-P---------EHVAHV-KKV-TALQRLGTQKELGELV  221 (254)
T ss_dssp             HHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC-H---------HHHHHH-HHH-SSSSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC-h---------HHHHHH-hcc-CCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999         66664321 0         001111 122 2448899999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ++|+++...+++|+.+.+|||+....
T Consensus       222 ~~l~s~~~~~~tG~~~~vdgG~~~~~  247 (254)
T 1zmt_A          222 AFLASGSCDYLTGQVFWLAGGFPMIE  247 (254)
T ss_dssp             HHHHTTSCGGGTTCEEEESTTCCCCC
T ss_pred             HHHhCcccCCccCCEEEECCCchhhc
Confidence            99999988999999999999987643

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=9.7e-43  Score=293.02  Aligned_cols=237  Identities=23%  Similarity=0.327  Sum_probs=197.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.  .++.++.+|++++++++++++++.+.++++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            689999999999999999999999999999999988887777765  468889999999999999999998889999999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||+.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||+++++|
T Consensus        79 vnnAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  157 (248)
T 3asu_A           79 VNNAGLALGM-EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_dssp             EECCCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCcCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHH
Confidence            9999986321 667889999999999999999999999999999877789999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeee-ccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCC
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  257 (280)
                      ++.++.|++++||+||+|+||+++ |++...........      .......     ....+|+|+|+++++|+++ ..+
T Consensus       158 ~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~------~~~~~~~-----~~~~~p~dvA~~v~~l~s~-~~~  225 (248)
T 3asu_A          158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGK------AEKTYQN-----TVALTPEDVSEAVWWVSTL-PAH  225 (248)
T ss_dssp             HHHHHHHTTTSCCEEEEEEECSBCC---------------------------------CCBCHHHHHHHHHHHHHS-CTT
T ss_pred             HHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHH------HHHHHhc-----cCCCCHHHHHHHHHHHhcC-Ccc
Confidence            999999999999999999999999 99864321111000      0011001     2346999999999999986 568


Q ss_pred             eeecEEEeCCccc
Q 023613          258 ISGTNLMVDGGFT  270 (280)
Q Consensus       258 ~~G~~i~~dgG~~  270 (280)
                      ++|+.+.++++..
T Consensus       226 ~~g~~i~v~~~~~  238 (248)
T 3asu_A          226 VNINTLEMMPVTQ  238 (248)
T ss_dssp             CCCCEEEECCTTC
T ss_pred             ceeeEEEEccccc
Confidence            9999999998843

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-43  Score=298.06  Aligned_cols=246  Identities=24%  Similarity=0.277  Sum_probs=197.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH-c
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK-F   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   92 (280)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++|+++++++++.+.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999999999999998877776665532 246788999999999999999999886 8


Q ss_pred             CCccEEEECCCCCCC-----CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc
Q 023613           93 GTLDIMVNNAGISGA-----PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        93 ~~~d~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~  167 (280)
                      +++|+||||||....     ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+. +...
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCc
Confidence            999999999953110     1156788899999999999999999999999999988778999999999887654 4579


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |++||++++.|++.++.|++++||+||+|+||+++|++.....+......      .........+.++..+|+|+|+++
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~pe~va~~v  234 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQ------DPVLKQFKSAFSSAETTELSGKCV  234 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------------CHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccc------hhHHHHHHhhhccCCCHHHHHHHH
Confidence            99999999999999999999999999999999999998654322111000      000010111225567899999999


Q ss_pred             HHhcCCCC-CCeeecEEEeCC
Q 023613          248 LFLASDEA-RYISGTNLMVDG  267 (280)
Q Consensus       248 ~~L~s~~~-~~~~G~~i~~dg  267 (280)
                      +||+++.. .++||+++..|+
T Consensus       235 ~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          235 VALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHTCTTGGGGTTCEEEHHH
T ss_pred             HHHhcCcccccccceeechhh
Confidence            99999876 489999998874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=4.1e-43  Score=296.36  Aligned_cols=245  Identities=33%  Similarity=0.439  Sum_probs=210.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.++++|++|||||++|||++++++|+++|++|++++|+ .+.++.+.+++.. ..++.++.+|++++++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999998 7777766655532 24688899999999999999999999


Q ss_pred             HcCCccEEEECCCC-CCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--C---ceEEEEccccccc-cCC
Q 023613           91 KFGTLDIMVNNAGI-SGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--K---GTIISICSVAGAI-GGL  163 (280)
Q Consensus        91 ~~~~~d~li~~ag~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~---~~iv~isS~~~~~-~~~  163 (280)
                      .++++|+||||||. ...  .++.+.+.++|++.+++|+.+++.++++++|.|.+..  .   ++||++||..+.. +.+
T Consensus        82 ~~g~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  159 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGR--KPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP  159 (258)
T ss_dssp             HHSSCSEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT
T ss_pred             HcCCCCEEEECCCCcCCc--CccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC
Confidence            99999999999997 433  6788899999999999999999999999999987543  3   8999999999887 788


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHH
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      +...|+++|++++.+++.++.|++++||++++|+||+++|++.....+.          +....... .+.+++.+|+|+
T Consensus       160 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~dv  228 (258)
T 3afn_B          160 GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQD----------VRDRISNG-IPMGRFGTAEEM  228 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHH----------HHHHHHTT-CTTCSCBCGGGT
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHH----------HHHHHhcc-CCCCcCCCHHHH
Confidence            8899999999999999999999999999999999999999986543110          11111122 234789999999


Q ss_pred             HHHHHHhcCCCCC-CeeecEEEeCCccc
Q 023613          244 ANAVLFLASDEAR-YISGTNLMVDGGFT  270 (280)
Q Consensus       244 a~~~~~L~s~~~~-~~~G~~i~~dgG~~  270 (280)
                      |+++++|+++... +++|+.+.+|||+.
T Consensus       229 a~~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          229 APAFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             HHHHHHHhCcchhccccCCEEeECCCcc
Confidence            9999999987666 89999999999975

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=6.5e-42  Score=295.82  Aligned_cols=249  Identities=25%  Similarity=0.340  Sum_probs=211.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+..  ..++.++.+|+++.++++++++.+.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999998877776665532  24688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcc-cCCCceEEEEccccccccCCCCccch
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|. +...++||++||..+..+.++...|+
T Consensus       101 ~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  178 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA  178 (302)
T ss_dssp             HTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH
Confidence            99999999999998654  6778899999999999999999999999999997 44568999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecc-ccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG-LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ++|++++.+++.++.+++++||++++|+||++.|+ +.....+....       ...+ ... .+.+++.+|+|+|++++
T Consensus       179 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-------~~~~-~~~-~p~~~~~~~~dva~~~~  249 (302)
T 1w6u_A          179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF-------EKEM-IGR-IPCGRLGTVEELANLAA  249 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH-------HHHH-HTT-CTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhh-------HHHH-Hhc-CCcCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999998 43332221110       0111 122 23478999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCccccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|+++...+++|+.+.+|||....
T Consensus       250 ~l~~~~~~~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          250 FLCSDYASWINGAVIKFDGGEEVL  273 (302)
T ss_dssp             HHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHcCCcccccCCCEEEECCCeeec
Confidence            999988889999999999997653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.6e-43  Score=328.18  Aligned_cols=231  Identities=28%  Similarity=0.449  Sum_probs=199.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---------chHHHHHHHhCCC-CCeEEEecCCCCHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---------NLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~   83 (280)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.         +.++++.+++... .+.   .+|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            358899999999999999999999999999999998764         5566555555322 222   358888888899


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC
Q 023613           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL  163 (280)
Q Consensus        84 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  163 (280)
                      +++++.+.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRD--ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            999999999999999999999765  788999999999999999999999999999999888789999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHH
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      +...|++||+|+.+|+++++.|++++||+||+|+|| +.|+|.....+..         .           .+..+|+|+
T Consensus       159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~---------~-----------~~~~~pe~v  217 (604)
T 2et6_A          159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPP---------M-----------LEKLGPEKV  217 (604)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHH---------H-----------HTTCSHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChh---------h-----------hccCCHHHH
Confidence            999999999999999999999999999999999998 6898865432210         0           123589999


Q ss_pred             HHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          244 ANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       244 a~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |.+++||+++. .++||+++.+|||+..
T Consensus       218 A~~v~~L~s~~-~~itG~~~~vdgG~~~  244 (604)
T 2et6_A          218 APLVLYLSSAE-NELTGQFFEVAAGFYA  244 (604)
T ss_dssp             HHHHHHHTSSS-CCCCSCEEEEETTEEE
T ss_pred             HHHHHHHhCCc-ccCCCCEEEECCCeEE
Confidence            99999999988 8999999999999753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=3.8e-43  Score=294.24  Aligned_cols=226  Identities=16%  Similarity=0.114  Sum_probs=198.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   92 (280)
                      ..++|++|||||++|||++++++|+++|++|++++|+.+...         ....++.+|++++++++++++++.+.+  
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999999999999876532         135677899999999999999999999  


Q ss_pred             CCccEEEECCCCCCCCCCCC-CCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDI-READLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||+...  .++ .+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++...|+++
T Consensus        75 g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  150 (241)
T 1dhr_A           75 QKVDAILCVAGGWAG--GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMA  150 (241)
T ss_dssp             CCEEEEEECCCCCCC--BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCCCEEEEcccccCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHH
Confidence            799999999998754  566 78889999999999999999999999999965  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHC--CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          172 KHAVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       172 K~al~~~~~~la~e~~--~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      |++++.|++.++.|++  ++||+||+|+||+++|++.....+...                   ..+..+|+|+|+++++
T Consensus       151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-------------------~~~~~~~~~vA~~v~~  211 (241)
T 1dhr_A          151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEAD-------------------FSSWTPLEFLVETFHD  211 (241)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSC-------------------GGGSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcchh-------------------hccCCCHHHHHHHHHH
Confidence            9999999999999999  899999999999999998654322110                   0234678999999999


Q ss_pred             hcCCCCCCeeecEEEeCCccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++...+++|+.+.+|||....
T Consensus       212 l~~~~~~~~~G~~~~v~g~~~~~  234 (241)
T 1dhr_A          212 WITGNKRPNSGSLIQVVTTDGKT  234 (241)
T ss_dssp             HHTTTTCCCTTCEEEEEEETTEE
T ss_pred             HhcCCCcCccceEEEEeCCCCce
Confidence            99999999999999999997653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.5e-42  Score=288.63  Aligned_cols=240  Identities=30%  Similarity=0.451  Sum_probs=207.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-CCCeEE-EecCCCCHHHHHHHHHHHHHHcCC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-EPDTFF-CHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~-~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+..++..+.+.. ..++.+ +.+|+++.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999999998 8888777766555432 235566 899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++...|+++|++
T Consensus        81 ~d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  158 (245)
T 2ph3_A           81 LDTLVNNAGITRD--TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAG  158 (245)
T ss_dssp             CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHH
Confidence            9999999998754  67788999999999999999999999999999987777999999999998888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++.+++.++.|++++||++++|+||+++|++.....+ .         ........ .+.+++.+|+|+|+++++++++.
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~---------~~~~~~~~-~~~~~~~~~~dva~~~~~l~~~~  227 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQ-E---------VKEAYLKQ-IPAGRFGRPEEVAEAVAFLVSEK  227 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-H---------HHHHHHHT-CTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCH-H---------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999998754211 1         11111112 23478899999999999999987


Q ss_pred             CCCeeecEEEeCCccc
Q 023613          255 ARYISGTNLMVDGGFT  270 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~  270 (280)
                      ..+++|+.+.+|||+.
T Consensus       228 ~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          228 AGYITGQTLCVDGGLT  243 (245)
T ss_dssp             GTTCCSCEEEESTTCS
T ss_pred             cccccCCEEEECCCCC
Confidence            7899999999999975

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-41  Score=284.87  Aligned_cols=233  Identities=22%  Similarity=0.235  Sum_probs=209.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-------KVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-------~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+.++.+.+++.. ..++.++.+|++++++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       999999998887777666643 356888999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|
T Consensus        81 ~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  158 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY  158 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCCEEEEcCCcCCc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchh
Confidence            9999999999999998754  67888999999999999999999999999999987778999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|++++.|++.++.|++++||++++|+||+++|++....... .              .     .++.+|+|+|++++
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~--------------~-----~~~~~~~dva~~~~  218 (244)
T 2bd0_A          159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-M--------------Q-----ALMMMPEDIAAPVV  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-T--------------G-----GGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcccc-c--------------c-----ccCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999986543211 0              0     25679999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++++...+++|+++..+||..+
T Consensus       219 ~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          219 QAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             HHHTSCTTEEEEEEEEEETTCCC
T ss_pred             HHHhCCccccchheEEecccccc
Confidence            99999999999999999999766

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-42  Score=286.46  Aligned_cols=241  Identities=28%  Similarity=0.385  Sum_probs=205.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+..++..+...   .+.++.+|++++++++++++    .+
T Consensus         2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 1cyd_A            2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP---GIEPVCVDLGDWDATEKALG----GI   74 (244)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc---CCCcEEecCCCHHHHHHHHH----Hc
Confidence            346889999999999999999999999999999999999887776655442   35567999999999888776    55


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+++
T Consensus        75 ~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 1cyd_A           75 GPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  152 (244)
T ss_dssp             CCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHH
Confidence            789999999998754  6788899999999999999999999999999998766 6899999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++++.+++.++.+++.+||++++++||++.|++..........       ...+ .+. .+.+++++|+|+|+++++|+
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~~-~~~-~~~~~~~~~~dva~~~~~l~  223 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEF-------ARKL-KER-HPLRKFAEVEDVVNSILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHH-------HHHH-HHH-STTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHH-------HHHH-Hhc-CCccCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999986533221111       1111 112 23378999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++...+++|+.+.+|||+..
T Consensus       224 ~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          224 SDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             SGGGTTCCSSEEEESTTGGG
T ss_pred             CchhhcccCCEEEECCCccC
Confidence            98888999999999999764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.8e-42  Score=299.45  Aligned_cols=239  Identities=26%  Similarity=0.360  Sum_probs=198.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ..++.++.+|++|.++++++++++.+.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4458999999999999999999999999999999999999988887777643 357889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++
T Consensus       106 ~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  183 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVA--GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV  183 (301)
T ss_dssp             HSSCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHH
Confidence            9999999999999865  7888999999999999999999999999999998766 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhh-hhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM-VGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ||+|+++|++.++.|++++||+|++|+||+++|++............... .....+  ........+++|+|+|++++.
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pedvA~~i~~  261 (301)
T 3tjr_A          184 AKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAF--GPLPTQDESVSADDVARLTAD  261 (301)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC------------------------CCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhc--cccccccCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999998654211100000000 000000  001112467899999999999


Q ss_pred             hcCCCC
Q 023613          250 LASDEA  255 (280)
Q Consensus       250 L~s~~~  255 (280)
                      ++....
T Consensus       262 ~l~~~~  267 (301)
T 3tjr_A          262 AILANR  267 (301)
T ss_dssp             HHHHTC
T ss_pred             HHhcCC
Confidence            986544

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.7e-42  Score=286.25  Aligned_cols=225  Identities=18%  Similarity=0.206  Sum_probs=187.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||++|||+++|++|+++|++|++++|+++.+++..+.+.  .++.++.+|+++.++++++++++.+   .+|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS--NNVGYRARDLASHQEVEQLFEQLDS---IPSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS--SCCCEEECCTTCHHHHHHHHHSCSS---CCSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--hccCeEeecCCCHHHHHHHHHHHhh---cCCEE
Confidence            789999999999999999999999999999999998888877763  4677889999999999998886643   34999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ ++||++||..+..+.++...|++||+|++.|
T Consensus        77 v~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           77 VHSAGSGYF--GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             EECCCCCCC--SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEeCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence            999998765  7888999999999999999999999999999997655 4999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC-CCCCC
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS-DEARY  257 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s-~~~~~  257 (280)
                      ++.++.|++++||+||+|+||+++|++.......                   .+.+++.+|+|+|+++++|++ +...+
T Consensus       154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------------------~~~~~~~~~~dvA~~i~~l~~~~~~~~  214 (230)
T 3guy_A          154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGKS-------------------LDTSSFMSAEDAALMIHGALANIGNGY  214 (230)
T ss_dssp             HHHHHHHTTTSSCEEEEEEECCC-----------------------------------CCCHHHHHHHHHHHCCEETTEE
T ss_pred             HHHHHHHHHhcCeEEEEEECCcccChHHHhcCCC-------------------CCcccCCCHHHHHHHHHHHHhCcCCCC
Confidence            9999999999999999999999999986553221                   012688999999999999987 67789


Q ss_pred             eeecEEEeCCccc
Q 023613          258 ISGTNLMVDGGFT  270 (280)
Q Consensus       258 ~~G~~i~~dgG~~  270 (280)
                      ++|+.+..+....
T Consensus       215 itg~~~~~~~~~~  227 (230)
T 3guy_A          215 VSDITVNREGHHH  227 (230)
T ss_dssp             EEEEEEEC-----
T ss_pred             ccceeecCCCCCC
Confidence            9999999887654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=4.9e-43  Score=305.36  Aligned_cols=256  Identities=20%  Similarity=0.255  Sum_probs=170.5

Q ss_pred             cccccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCc-----------chHHH-----------HHHHhCCCC-
Q 023613           12 AVQRLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQD-----------NLGQQ-----------VCQSLGGEP-   66 (280)
Q Consensus        12 ~~~~l~~k~vlItGa--~~giG~~la~~l~~~g~~V~~~~r~~-----------~~~~~-----------~~~~~~~~~-   66 (280)
                      +.+++++|++|||||  ++|||+++|++|+++|++|++++|++           +.+++           ..+++.... 
T Consensus         3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred             cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence            334688999999999  89999999999999999999998753           11111           112221111 


Q ss_pred             ---CeEEEecC--CCC------------------HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHH
Q 023613           67 ---DTFFCHCD--VTK------------------EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV  123 (280)
Q Consensus        67 ---~~~~~~~D--~~~------------------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~  123 (280)
                         ...++.+|  +++                  +++++++++++.+.++++|+||||||+......++.+.+.++|++.
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence               12344433  332                  3478999999999999999999999976321267889999999999


Q ss_pred             hhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC-ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCee
Q 023613          124 FDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAV  201 (280)
Q Consensus       124 ~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v  201 (280)
                      +++|+.+++.++++++|+|.+  .|+||++||..+..+.+++ ..|++||+|+++|++.++.|+++ +||+||+|+||++
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  240 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL  240 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhHhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCc
Confidence            999999999999999999965  3899999999999888887 69999999999999999999985 8999999999999


Q ss_pred             eccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          202 ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       202 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +|++............  .......... ..+.+++.+|+|+|++++||+++...++||++|.+|||+...
T Consensus       241 ~T~~~~~~~~~~~~~~--~~~~~~~~~~-~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          241 KSRAASAIGKAGDKTF--IDLAIDYSEA-NAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             C----------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             cChhhhhcccccchhh--HHHHHHHHhc-cCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            9998654321100000  0001011111 123488999999999999999998999999999999998754

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-42  Score=290.97  Aligned_cols=253  Identities=27%  Similarity=0.367  Sum_probs=209.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+.+.. ..++.++.+|++|+++++++++++.+
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999 66666665555432 35688899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccch
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYT  169 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~  169 (280)
                      .++++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++++.|. + +++||++||..+. .+.++...|+
T Consensus        96 ~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~~iv~~sS~~~~~~~~~~~~~Y~  171 (274)
T 1ja9_A           96 HFGGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R-GGRIILTSSIAAVMTGIPNHALYA  171 (274)
T ss_dssp             HHSCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E-EEEEEEECCGGGTCCSCCSCHHHH
T ss_pred             HcCCCCEEEECCCCCCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-CCEEEEEcChHhccCCCCCCchHH
Confidence            99999999999998754  6778899999999999999999999999999997 3 3899999999988 7778889999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc---hhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE---EERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      ++|++++.+++.++.|++.+||++++++||+++|++.......   ................. ..+.+++++|+|+|++
T Consensus       172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~  250 (274)
T 1ja9_A          172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN-MNPLKRIGYPADIGRA  250 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH-TSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh-cCCCCCccCHHHHHHH
Confidence            9999999999999999999999999999999999986531100   00000000001111111 2234789999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++|+++...+++|+.+.+|||+.
T Consensus       251 i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          251 VSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHhCcccccccCcEEEecCCcC
Confidence            999999888899999999999963

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.3e-42  Score=321.60  Aligned_cols=230  Identities=30%  Similarity=0.524  Sum_probs=195.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.  .++..+++.. ..++..+.+|++  ++.+++++++.+.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999998642  2233333321 245667778883  55678899999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+++..|++||
T Consensus       394 G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asK  471 (604)
T 2et6_A          394 GTIDILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSK  471 (604)
T ss_dssp             SCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHH
Confidence            999999999999765  788999999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|+.+|+++++.|++++||+||+|+||. +|+|.....+.+                    ..+..+|+|+|++++||++
T Consensus       472 aal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~--------------------~~~~~~pe~vA~~v~~L~s  530 (604)
T 2et6_A          472 AGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQ--------------------DKNLYHADQVAPLLVYLGT  530 (604)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-----------------------------CCSSCGGGTHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchh--------------------hccCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999995 999865432210                    0234689999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +... +||+++.+|||+..
T Consensus       531 ~~~~-itG~~~~vdGG~~~  548 (604)
T 2et6_A          531 DDVP-VTGETFEIGGGWIG  548 (604)
T ss_dssp             TTCC-CCSCEEEEETTEEE
T ss_pred             CccC-CCCcEEEECCCeeE
Confidence            9888 99999999999764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=4.2e-42  Score=296.53  Aligned_cols=248  Identities=24%  Similarity=0.257  Sum_probs=197.6

Q ss_pred             ccccCCcEEEEEcCC--ChHHHHHHHHHHHcCCeEEEEecCcc-----------hHHHHHHHhCCCC--C-eEEEecC--
Q 023613           13 VQRLVGRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDN-----------LGQQVCQSLGGEP--D-TFFCHCD--   74 (280)
Q Consensus        13 ~~~l~~k~vlItGa~--~giG~~la~~l~~~g~~V~~~~r~~~-----------~~~~~~~~~~~~~--~-~~~~~~D--   74 (280)
                      .+++++|++|||||+  +|||+++|++|+++|++|++++|++.           .+++. +.+....  . ...+.+|  
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcccccccccccccccee
Confidence            346889999999999  99999999999999999999987531           11111 1121110  1 2333333  


Q ss_pred             ------CC------------CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHH
Q 023613           75 ------VT------------KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK  136 (280)
Q Consensus        75 ------~~------------~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  136 (280)
                            ++            ++++++++++++.+.++++|+||||||+......++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                  32            256899999999999999999999999754222678889999999999999999999999


Q ss_pred             HHHHhcccCCCceEEEEccccccccCCCC-ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCeeeccccccCCCchh
Q 023613          137 HAARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLPEEE  214 (280)
Q Consensus       137 ~~~~~l~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~T~~~~~~~~~~~  214 (280)
                      +++|.|.+  .|+||++||..+..+.+++ ..|++||+|+++|++.++.|+++ +||+||+|+||+++|++...... .+
T Consensus       162 ~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~-~~  238 (297)
T 1d7o_A          162 HFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF-ID  238 (297)
T ss_dssp             HHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH-HH
T ss_pred             HHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc-cH
Confidence            99999965  4899999999999988887 69999999999999999999985 89999999999999998654210 00


Q ss_pred             hhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          215 RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                             .+....... .+.+++.+|+|+|+++++|+++...+++|+.+.+|||+...
T Consensus       239 -------~~~~~~~~~-~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          239 -------TMIEYSYNN-APIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             -------HHHHHHHHH-SSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             -------HHHHHhhcc-CCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence                   011111222 24488999999999999999998899999999999998764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2.2e-42  Score=291.37  Aligned_cols=228  Identities=17%  Similarity=0.192  Sum_probs=197.6

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +...+..+|++|||||++|||+++|++|+++|++|++++|+.+...           ...+.+|++|.++++++++++.+
T Consensus        15 ~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~d~~d~~~v~~~~~~~~~   83 (251)
T 3orf_A           15 VPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------DHSFTIKDSGEEEIKSVIEKINS   83 (251)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred             cccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------ccceEEEeCCHHHHHHHHHHHHH
Confidence            3444567999999999999999999999999999999999876432           23578999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+.... ..+.+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++...|++
T Consensus        84 ~~g~iD~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~  160 (251)
T 3orf_A           84 KSIKVDTFVCAAGGWSGG-NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGA  160 (251)
T ss_dssp             TTCCEEEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCccCCCC-CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHH
Confidence            999999999999987652 33778889999999999999999999999999965  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHC--CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~~~~la~e~~--~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +|+|++.|++.++.|++  ++||+|++|+||+++|++.....+..                   +.+++.+|+|+|++++
T Consensus       161 sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------------------~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          161 TKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDA-------------------NFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             HHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTS-------------------CGGGSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccc-------------------cccccCCHHHHHHHHH
Confidence            99999999999999987  88999999999999999866543321                   1256789999999999


Q ss_pred             HhcCC-CCCCeeecEEEeCCcccc
Q 023613          249 FLASD-EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~-~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+++ ...+++|+++.+++|...
T Consensus       222 ~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHhcCccccCCcceEEEEecCCcc
Confidence            99998 888999999999988654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-42  Score=288.29  Aligned_cols=224  Identities=17%  Similarity=0.160  Sum_probs=196.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      +++|++|||||++|||++++++|+++|++|++++|+++..+         ....++.+|++++++++++++++.+.+  +
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            35899999999999999999999999999999999876532         135677899999999999999999998  7


Q ss_pred             CccEEEECCCCCCCCCCCC-CCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDI-READLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|+||||||+...  .++ .+.+.++|++.+++|+.+++.++++++|.|.+  .|+||++||..+..+.++...|+++|
T Consensus        72 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK  147 (236)
T 1ooe_A           72 QVDGVFCVAGGWAG--GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAK  147 (236)
T ss_dssp             CEEEEEECCCCCCC--BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             CCCEEEECCcccCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHH
Confidence            99999999998754  566 77889999999999999999999999999965  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHC--CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH-H
Q 023613          173 HAVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-F  249 (280)
Q Consensus       173 ~al~~~~~~la~e~~--~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~  249 (280)
                      ++++.|++.++.|++  ++||+|++|+||+++|++.....+...                   ..++.+|+|+|++++ +
T Consensus       148 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-------------------~~~~~~~~dvA~~i~~~  208 (236)
T 1ooe_A          148 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNAD-------------------HSSWTPLSFISEHLLKW  208 (236)
T ss_dssp             HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCC-------------------GGGCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCcc-------------------ccccCCHHHHHHHHHHH
Confidence            999999999999998  899999999999999998654322110                   034568999999998 5


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+++...+++|+.+.+|||...
T Consensus       209 l~s~~~~~~~G~~~~v~gg~~~  230 (236)
T 1ooe_A          209 TTETSSRPSSGALLKITTENGT  230 (236)
T ss_dssp             HHCGGGCCCTTCEEEEEEETTE
T ss_pred             HcCCCcccccccEEEEecCCCc
Confidence            5588888999999999999765

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=6.5e-41  Score=286.83  Aligned_cols=244  Identities=21%  Similarity=0.269  Sum_probs=202.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+...  .++.++.+|+++.++++++++++.+.++++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP--DRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT--TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            568999999999999999999999999999999999998888776654  468899999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|++||+++
T Consensus        81 d~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (281)
T 3m1a_A           81 DVLVNNAGRTQV--GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAAL  158 (281)
T ss_dssp             SEEEECCCCEEE--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCcCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHH
Confidence            999999998755  778899999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc----hhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE----EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      +.+++.++.|++++||++++|+||+++|++.......    .............+.  ...+.+++.+|+|+|+++++++
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~a~~~~~  236 (281)
T 3m1a_A          159 EQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV--QGSDGSQPGDPAKAAAAIRLAL  236 (281)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH--HC-----CBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH--hhccCCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999986543211    011111101111111  1123477899999999999999


Q ss_pred             CCCCCCeeecEEEeCCc
Q 023613          252 SDEARYISGTNLMVDGG  268 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG  268 (280)
                      +...   .|..+.+.++
T Consensus       237 ~~~~---~~~~~~l~s~  250 (281)
T 3m1a_A          237 DTEK---TPLRLALGGD  250 (281)
T ss_dssp             HSSS---CCSEEEESHH
T ss_pred             hCCC---CCeEEecCch
Confidence            7653   4556666554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-41  Score=283.70  Aligned_cols=244  Identities=29%  Similarity=0.437  Sum_probs=199.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+..   ..++.++.+|++|+++++++++.+.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            6799999999999999999999999999999999998877776666643   2468889999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCccch
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +++|+||||||+..          .++|++.+++|+.+++.+++.++|.|.+++   .++||++||..+..+.++...|+
T Consensus        85 g~id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (267)
T 2gdz_A           85 GRLDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  154 (267)
T ss_dssp             SCCCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence            99999999999752          256899999999999999999999997653   58999999999999989999999


Q ss_pred             hhHHHHHHHHHHH--HHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          170 GSKHAVLGLNKNV--AAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       170 ~sK~al~~~~~~l--a~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      ++|++++.+++.+  +.|++++||+||+|+||+++|++.....+..... . ...+........+ ..++++|+|+|+++
T Consensus       155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~~dvA~~v  231 (267)
T 2gdz_A          155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMG-Q-YIEYKDHIKDMIK-YYGILDPPLIANGL  231 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHG-G-GGGGHHHHHHHHH-HHCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccc-h-hhhHHHHHHHHhc-cccCCCHHHHHHHH
Confidence            9999999999995  6899999999999999999999865432111000 0 0000000000000 13578999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCccccccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      ++|+++.  +++|+++.+|||....-.
T Consensus       232 ~~l~s~~--~~~G~~~~v~gg~~~~~~  256 (267)
T 2gdz_A          232 ITLIEDD--ALNGAIMKITTSKGIHFQ  256 (267)
T ss_dssp             HHHHHCT--TCSSCEEEEETTTEEEEC
T ss_pred             HHHhcCc--CCCCcEEEecCCCccccc
Confidence            9999875  599999999998765433

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=285.01  Aligned_cols=246  Identities=27%  Similarity=0.375  Sum_probs=204.0

Q ss_pred             CccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHH
Q 023613           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ++.+.++++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.+..   ..++.++.+|++++++++++++
T Consensus        24 ~~~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~  103 (279)
T 1xg5_A           24 RPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS  103 (279)
T ss_dssp             CTTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred             cccccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHH
Confidence            3345568999999999999999999999999999999999998877766655532   2457888999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC--ceEEEEcccccc--ccC
Q 023613           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK--GTIISICSVAGA--IGG  162 (280)
Q Consensus        87 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~isS~~~~--~~~  162 (280)
                      ++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.  ++||++||..+.  .+.
T Consensus       104 ~~~~~~g~iD~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~  181 (279)
T 1xg5_A          104 AIRSQHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL  181 (279)
T ss_dssp             HHHHHHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC
T ss_pred             HHHHhCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC
Confidence            999999999999999998754  67888999999999999999999999999999987763  899999999887  566


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHC--CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~--~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      ++...|+++|++++.|++.++.|++  .+||++++|+||+++|++...........      .    ..... ..++.+|
T Consensus       182 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~------~----~~~~~-~~~~~~~  250 (279)
T 1xg5_A          182 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEK------A----AATYE-QMKCLKP  250 (279)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHH------H----HHHHC----CBCH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhH------H----hhhcc-cccCCCH
Confidence            7778999999999999999999998  88999999999999999854332211100      0    01111 2567899


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      +|+|++++++++....+.+|+....++|
T Consensus       251 ~dvA~~i~~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          251 EDVAEAVIYVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             HHHHHHHHHHhcCCcceEeeeEEEccCC
Confidence            9999999999998887888865555444

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.9e-40  Score=276.45  Aligned_cols=226  Identities=33%  Similarity=0.434  Sum_probs=192.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+.   ++.++.+|+++.++++++++.+.+.++++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE---GALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---hceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999999888777766654   577889999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++++
T Consensus        81 ~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  158 (234)
T 2ehd_A           81 ALVNNAGVGVM--KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLL  158 (234)
T ss_dssp             EEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHH
Confidence            99999998754  6788899999999999999999999999999998877899999999999998889999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  256 (280)
                      .+++.++.|++++||++++|+||+++|++.... +.            .+         ...+|+|+|+++++++++...
T Consensus       159 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~------------~~---------~~~~~~dvA~~~~~l~~~~~~  216 (234)
T 2ehd_A          159 GLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-PG------------QA---------WKLKPEDVAQAVLFALEMPGH  216 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEECC--------------------------------------CCHHHHHHHHHHHHHSCCS
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-cc------------cc---------CCCCHHHHHHHHHHHhCCCcc
Confidence            999999999999999999999999999985431 10            00         036999999999999999889


Q ss_pred             CeeecEEEeCCcc
Q 023613          257 YISGTNLMVDGGF  269 (280)
Q Consensus       257 ~~~G~~i~~dgG~  269 (280)
                      +++|+++..+++.
T Consensus       217 ~~~g~~~~~~~~~  229 (234)
T 2ehd_A          217 AMVSEIELRPTRP  229 (234)
T ss_dssp             SCCCEEECCC---
T ss_pred             cccceEEEeecCC
Confidence            9999987666543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=7e-42  Score=321.24  Aligned_cols=234  Identities=27%  Similarity=0.414  Sum_probs=188.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec---------CcchHHHHHHHhCCCCCeEEEecCCCCHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV---------QDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   83 (280)
                      ..+++||++|||||++|||+++|++|+++|++|++++|         +.+.++...+++.....  ...+|+++.+++++
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~D~~d~~~~~~   91 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG--EAVADYNSVIDGAK   91 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC--CEEECCCCGGGHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC--eEEEEeCCHHHHHH
Confidence            45789999999999999999999999999999999987         66666666666643221  12479999999999


Q ss_pred             HHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC
Q 023613           84 AVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL  163 (280)
Q Consensus        84 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~  163 (280)
                      +++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.+
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~  169 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRD--RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF  169 (613)
T ss_dssp             HHC----------CEECCCCCCCC--CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            999999999999999999999865  788999999999999999999999999999999988889999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHH
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      +...|++||+|+++|++.++.|++++||+||+|+||.+ |++.....+...                    .+..+|+|+
T Consensus       170 ~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~--------------------~~~~~pedv  228 (613)
T 3oml_A          170 GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDIL--------------------FNELKPKLI  228 (613)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHH--------------------HTTCCGGGT
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchhh--------------------hhcCCHHHH
Confidence            99999999999999999999999999999999999974 666555433210                    234589999


Q ss_pred             HHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          244 ANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       244 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |++++||+++. .+++|+++.+|||+...
T Consensus       229 A~~v~~L~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          229 APVVAYLCHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             HHHHHHTTSTT-CCCCSCEEEEETTEEEE
T ss_pred             HHHHHHhcCCC-cCCCceEEEECCCeEEE
Confidence            99999999998 89999999999998754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.1e-41  Score=296.46  Aligned_cols=232  Identities=26%  Similarity=0.402  Sum_probs=199.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEe---------cCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIAD---------VQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~---------r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   84 (280)
                      ++++||++|||||++|||+++|++|+++|++|++++         |+.+..++..+++.....  ...+|+++.++++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~~~~D~~~~~~~~~~   82 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--KAVANYDSVEAGEKL   82 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--EEEEECCCGGGHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--eEEEeCCCHHHHHHH
Confidence            358899999999999999999999999999999964         456666666555532221  234899999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023613           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  164 (280)
                      ++++.+.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++
T Consensus        83 ~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~  160 (319)
T 1gz6_A           83 VKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  160 (319)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence            99999999999999999998765  6788899999999999999999999999999998877899999999999999899


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      +..|++||++++.|++.++.|++++||+||+|+||++ |++.....+..         .           .+..+|+|+|
T Consensus       161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~---------~-----------~~~~~p~dvA  219 (319)
T 1gz6_A          161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPED---------L-----------VEALKPEYVA  219 (319)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHH---------H-----------HHHSCGGGTH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChh---------h-----------hccCCHHHHH
Confidence            9999999999999999999999999999999999998 87754322210         0           1135899999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          245 NAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++++|+++. .+++|++|.+|||+..
T Consensus       220 ~~~~~l~s~~-~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          220 PLVLWLCHES-CEENGGLFEVGAGWIG  245 (319)
T ss_dssp             HHHHHHTSTT-CCCCSCEEEEETTEEE
T ss_pred             HHHHHHhCch-hhcCCCEEEECCCeEE
Confidence            9999999874 5889999999999764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.4e-41  Score=292.51  Aligned_cols=232  Identities=21%  Similarity=0.205  Sum_probs=189.9

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+.+..++..+.+.  .++.++.+|++|.++++++++++   
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~---   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA--GQVEVRELDLQDLSSVRRFADGV---   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSS--SEEEEEECCTTCHHHHHHHHHTC---
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--CCeeEEEcCCCCHHHHHHHHHhc---
Confidence            4567999999999999999999999999999999999999988887776663  57889999999999999888866   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------  161 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~----------  161 (280)
                       +++|+||||||+..+    ..+.+.++|++.+++|+.+++.++++++|.|.+    +||++||..+..+          
T Consensus        85 -~~iD~lv~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~  155 (291)
T 3rd5_A           85 -SGADVLINNAGIMAV----PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWR  155 (291)
T ss_dssp             -CCEEEEEECCCCCSC----CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCS
T ss_pred             -CCCCEEEECCcCCCC----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccccc
Confidence             799999999998743    356788899999999999999999999999964    8999999988755          


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCCCC--eEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCC
Q 023613          162 ---GLGPHAYTGSKHAVLGLNKNVAAELGKYG--IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGT  236 (280)
Q Consensus       162 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~g--i~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (280)
                         .++...|++||+|++.|++.++.|++++|  |++|+|+||+++|++.....+...          ....+  .+.++
T Consensus       156 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~----------~~~~~--~~~~~  223 (291)
T 3rd5_A          156 SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLG----------DALMS--AATRV  223 (291)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------------
T ss_pred             ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHH----------HHHHH--HHHHH
Confidence               23456899999999999999999999887  999999999999999765422110          00011  12244


Q ss_pred             CC-CHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          237 EL-TANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       237 ~~-~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +. +|+|+|+++++|+++  .+++|+.+.+|||+..
T Consensus       224 ~~~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          224 VATDADFGARQTLYAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             -CHHHHHHHHHHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred             HhCCHHHHHHHHHHHHcC--CCCCCceeCCcccccC
Confidence            44 499999999999987  4899999999999874

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=6.9e-41  Score=291.65  Aligned_cols=241  Identities=24%  Similarity=0.385  Sum_probs=191.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+..   ..++.++.+|++++++++++++.+.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999999888877666532   2378899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC------CCceEEEEccccccccCC
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGL  163 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~  163 (280)
                      +.++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.++      +.|+||++||..+..+.+
T Consensus        83 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~  160 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLF--QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG  160 (319)
T ss_dssp             HHTCCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS
T ss_pred             HhCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC
Confidence            999999999999999765  789999999999999999999999999999999764      579999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhh-HHHHHhhhccCCCCCCCHHH
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG-FRNFVARNANMQGTELTAND  242 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ++..|++||+|+++|++.++.|++++||+|++|+||+|+|++................. ...............++|++
T Consensus       161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~  240 (319)
T 3ioy_A          161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDV  240 (319)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHH
Confidence            99999999999999999999999999999999999999999876432211110000000 00000111111112379999


Q ss_pred             HHHHHHHhcCCCC
Q 023613          243 VANAVLFLASDEA  255 (280)
Q Consensus       243 va~~~~~L~s~~~  255 (280)
                      +|+.++.++....
T Consensus       241 vA~~~~~al~~~~  253 (319)
T 3ioy_A          241 IGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999987654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-40  Score=278.58  Aligned_cols=226  Identities=19%  Similarity=0.194  Sum_probs=193.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++|++|||||++|||++++++|+++|  ++|++++|+.+..+.+.+ + ...++.++.+|++++++++++++++.+.++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C-CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c-cCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            358999999999999999999999999  999999999887766543 2 245788999999999999999999999998


Q ss_pred             --CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC------C-----CceEEEEccccccc
Q 023613           94 --TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------T-----KGTIISICSVAGAI  160 (280)
Q Consensus        94 --~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~iv~isS~~~~~  160 (280)
                        ++|+||||||+..+ ..++.+.+.++|++.+++|+.+++.++++++|.|.++      +     .++||++||..+..
T Consensus        79 ~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  157 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence              99999999998762 2678889999999999999999999999999998765      4     68999999999887


Q ss_pred             cC-------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccC
Q 023613          161 GG-------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM  233 (280)
Q Consensus       161 ~~-------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (280)
                      +.       ++...|+++|++++.+++.++.+++++||++++|+||+++|++...                         
T Consensus       158 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------------  212 (250)
T 1yo6_A          158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------------  212 (250)
T ss_dssp             TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred             CCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------------
Confidence            76       5778999999999999999999999999999999999999998532                         


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                       ..+.+|+|+|+.++++++....+++|+.+.+|||..
T Consensus       213 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             -CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCC
Confidence             134689999999999999888889999999999853

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-40  Score=275.68  Aligned_cols=228  Identities=30%  Similarity=0.442  Sum_probs=194.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .          .++.++.+|++++++++++++++ +.++++|+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~   69 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFA   69 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceE
Confidence            789999999999999999999999999999999875 1          23578899999999999999999 88899999


Q ss_pred             EEECCCCCCCCCCCCCCCC----HHHHHHHhhhhhHhHHHHHHHHHHhcccCC---C---ceEEEEccccccccCCCCcc
Q 023613           98 MVNNAGISGAPCPDIREAD----LSEFEKVFDINVKGVFHGMKHAARIMIPQT---K---GTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~---~~iv~isS~~~~~~~~~~~~  167 (280)
                      +|||||....  .++.+.+    .++|++.+++|+.+++.+++++.+.|.+++   .   ++||++||..+..+.++...
T Consensus        70 li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  147 (242)
T 1uay_A           70 VVSAAGVGLA--EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  147 (242)
T ss_dssp             EEECCCCCCC--CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             EEEcccccCc--ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence            9999998754  4455444    459999999999999999999999998754   3   49999999999999899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+++|++++.+++.++.|++++||++++|+||+++|++.....+.          +.....+..++.+++.+|+|+|+++
T Consensus       148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~dva~~~  217 (242)
T 1uay_A          148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK----------AKASLAAQVPFPPRLGRPEEYAALV  217 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH----------HHHHHHTTCCSSCSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchh----------HHHHHHhhCCCcccCCCHHHHHHHH
Confidence            999999999999999999999999999999999999987653211          1111122222227889999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++|+++  .+++|+.+.+|||+..
T Consensus       218 ~~l~~~--~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          218 LHILEN--PMLNGEVVRLDGALRM  239 (242)
T ss_dssp             HHHHHC--TTCCSCEEEESTTCCC
T ss_pred             HHHhcC--CCCCCcEEEEcCCeec
Confidence            999987  7899999999999875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=4.5e-40  Score=277.61  Aligned_cols=234  Identities=21%  Similarity=0.226  Sum_probs=192.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~   90 (280)
                      ++++|++|||||++|||+++|++|+++|++ |++++|+.+  ..+++.+.. ...++.++.+|++|+ ++++++++++.+
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC-TTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC-CCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            478999999999999999999999999997 999999863  333333322 234678899999998 999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCcc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~~  167 (280)
                      .++++|++|||||+.          +.++|++.+++|+.+++.++++++|.|.+++   .|+||++||..+..+.++...
T Consensus        81 ~~g~id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (254)
T 1sby_A           81 QLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHSCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             hcCCCCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchH
Confidence            999999999999974          2357999999999999999999999997654   589999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |++||++++.|++.++.+++++||++++|+||+++|++...........    .....+.. .    ..+.+|+|+|+++
T Consensus       151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~-~----~~~~~~~dvA~~i  221 (254)
T 1sby_A          151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVE----PRVAELLL-S----HPTQTSEQCGQNF  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSC----TTHHHHHT-T----SCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhh----HHHHHHHh-c----CCCCCHHHHHHHH
Confidence            9999999999999999999888999999999999999876432110000    00111111 1    2345899999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++++   .+.+|+++.+|||+..
T Consensus       222 ~~~~~---~~~~G~~~~v~gG~~~  242 (254)
T 1sby_A          222 VKAIE---ANKNGAIWKLDLGTLE  242 (254)
T ss_dssp             HHHHH---HCCTTCEEEEETTEEE
T ss_pred             HHHHH---cCCCCCEEEEeCCcee
Confidence            99995   4789999999999754

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.7e-40  Score=291.34  Aligned_cols=241  Identities=12%  Similarity=0.001  Sum_probs=196.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHH------------HHHHHhC-CCCCeEEEecCCCCHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQ------------QVCQSLG-GEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~-~g~~V~~~~r~~~~~~------------~~~~~~~-~~~~~~~~~~D~~~~~~~   81 (280)
                      ..+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            ...+.+. ...++..+.+|+++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4599999999999999999999999 9999999988754321            1222221 235678899999999999


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCC-----------CCCCC---------------------CCCCHHHHHHHhhhhhH
Q 023613           82 CSAVDLTVEKFGTLDIMVNNAGISGA-----------PCPDI---------------------READLSEFEKVFDINVK  129 (280)
Q Consensus        82 ~~~~~~~~~~~~~~d~li~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~~  129 (280)
                      +++++++.+.+|++|+||||||....           ..+++                     .+.+.++|++.+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            99999999999999999999997410           11344                     77899999999999999


Q ss_pred             hHH-HHHHHHHHh-cccCCCceEEEEccccccccCCCC--ccchhhHHHHHHHHHHHHHHHCCC-CeEEEEEeCCeeecc
Q 023613          130 GVF-HGMKHAARI-MIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGKY-GIRVNCVSPYAVATG  204 (280)
Q Consensus       130 ~~~-~l~~~~~~~-l~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~~-gi~v~~v~pg~v~T~  204 (280)
                      +.+ .+++++.+. |. ..+|+||++||..+..+.+.+  +.|++||+++++|++++|.||+++ |||||+|+||++.|+
T Consensus       205 ~~~~~~~~~~~~~~m~-~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVL-AEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHHHHHHHHTCE-EEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             hHHHHHHHHHHHHhhh-hCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            998 788887754 44 346999999999999998887  999999999999999999999999 999999999999999


Q ss_pred             ccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          205 LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +........ ...       ....+   +.++..+|||+++++++|+++   ++.|+.+.+|++...
T Consensus       284 ~s~~ip~~p-~y~-------~~l~~---~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~  336 (405)
T 3zu3_A          284 ASSAIPMMP-LYL-------SLLFK---VMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRL  336 (405)
T ss_dssp             HHHTSTTHH-HHH-------HHHHH---HHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCE
T ss_pred             hhhcCCCCc-HHH-------HHHHH---HHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCC
Confidence            976543221 111       11111   127788999999999999987   678888889997654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-40  Score=277.73  Aligned_cols=233  Identities=18%  Similarity=0.159  Sum_probs=199.5

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcC---CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHG---AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      +...++++|++|||||++|||+++|++|+++|   ++|++++|+.+..+.+.+......++.++.+|+++.+++++++++
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   93 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVAD   93 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHH
Confidence            34456889999999999999999999999999   999999999876554432222235788999999999999999999


Q ss_pred             HHHHcC--CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC------C-----CceEEEEc
Q 023613           88 TVEKFG--TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------T-----KGTIISIC  154 (280)
Q Consensus        88 ~~~~~~--~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~iv~is  154 (280)
                      +.+.++  ++|+||||||+... ..++.+.+.++|++.+++|+.+++.++++++|.|.++      +     .++||++|
T Consensus        94 ~~~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  172 (267)
T 1sny_A           94 IEGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  172 (267)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             HHHhcCCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEe
Confidence            999988  89999999998762 1678889999999999999999999999999998765      3     58999999


Q ss_pred             cccccccCC---CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc
Q 023613          155 SVAGAIGGL---GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       155 S~~~~~~~~---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                      |..+..+.+   +...|+++|++++.|++.++.|++++||++++|+||+++|++...                       
T Consensus       173 S~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------  229 (267)
T 1sny_A          173 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------------  229 (267)
T ss_dssp             CGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------
T ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------
Confidence            998877653   677899999999999999999999999999999999999998532                       


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                         ....+|+++|+.++++++.....++|+.+.+|||..
T Consensus       230 ---~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 ---SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             ---TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             ---CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence               134689999999999999888899999999999863

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2.1e-40  Score=293.30  Aligned_cols=243  Identities=13%  Similarity=0.017  Sum_probs=194.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHH------------HHHHhC-CCCCeEEEecCCCCHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQ------------VCQSLG-GEPDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~-~g~~V~~~~r~~~~~~~------------~~~~~~-~~~~~~~~~~D~~~~~~~~   82 (280)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+..++            +.+.+. ...++..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            599999999999999999999999 99999999997654321            112222 2357888999999999999


Q ss_pred             HHHHHHHHHc-CCccEEEECCCCCC-----------CCCCCC---------------------CCCCHHHHHHHhhhhhH
Q 023613           83 SAVDLTVEKF-GTLDIMVNNAGISG-----------APCPDI---------------------READLSEFEKVFDINVK  129 (280)
Q Consensus        83 ~~~~~~~~~~-~~~d~li~~ag~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~n~~  129 (280)
                      ++++.+.+.+ |++|+||||||...           ....++                     .+.+.++|++.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 99999999999720           011333                     36899999999999999


Q ss_pred             hHH-HHHHHHHHhcccCCCceEEEEccccccccCCCC--ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecccc
Q 023613          130 GVF-HGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       130 ~~~-~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~  206 (280)
                      +.+ .+++++.+.+...++|+||++||..+..+.|.+  ..|++||+|+.+|+++||.||+++|||||+|+||+++|++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            987 788887765433446899999999999888766  89999999999999999999999999999999999999997


Q ss_pred             ccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCee-ecEEEeCCcccc
Q 023613          207 LAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS-GTNLMVDGGFTS  271 (280)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~-G~~i~~dgG~~~  271 (280)
                      .... ..+...      ... .  . +.++..+||||++++++|+++.- |.+ |+...+|++...
T Consensus       300 ~~ip-~~~~~~------~~~-~--~-~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~  353 (422)
T 3s8m_A          300 AAIP-VMPLYI------SMV-Y--K-IMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRL  353 (422)
T ss_dssp             GGST-HHHHHH------HHH-H--H-HHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCE
T ss_pred             hcCC-CChHHH------HHH-H--h-hhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCC
Confidence            6542 211110      000 1  1 23788999999999999998754 665 777768887665

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-38  Score=277.64  Aligned_cols=249  Identities=21%  Similarity=0.230  Sum_probs=187.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-----cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++|++|||||++|||+++|++|+++|++|+++.|+     .+.++.+.+.+.. ..++.++.+|++|+++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            3678999999999999999999999999999988775     3444444443322 357889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-CCCCcc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPHA  167 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-~~~~~~  167 (280)
                      .+.+|++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+ .++...
T Consensus        82 ~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~  159 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVF--GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP  159 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchh
Confidence            9999999999999998765  7889999999999999999999999999999998888899999999998854 466788


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCC---Cchhhhhhhhh------hHHHHHhhhccCCCCCC
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL---PEEERTEDAMV------GFRNFVARNANMQGTEL  238 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~  238 (280)
                      |++||+|+++|++.++.|++++||+|++|+||++.|++.....   +..........      ...........+.....
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDA  239 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999999999999987643211   11110000000      00001111111223457


Q ss_pred             CHHHHHHHHHHhcCCCCCCeeecEEEeC
Q 023613          239 TANDVANAVLFLASDEARYISGTNLMVD  266 (280)
Q Consensus       239 ~~~dva~~~~~L~s~~~~~~~G~~i~~d  266 (280)
                      +|+++|++++.++..... .....+.++
T Consensus       240 ~p~~vA~aiv~~~~~~~~-~~~~~~~~g  266 (324)
T 3u9l_A          240 DVSLVADAIVRVVGTASG-KRPFRVHVD  266 (324)
T ss_dssp             CTHHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred             CHHHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence            899999999999865421 234566665

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-39  Score=274.08  Aligned_cols=221  Identities=27%  Similarity=0.403  Sum_probs=194.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+..+++.+++.. ..++.++.+|++++++++++++++.+.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999998877776665532 247889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++
T Consensus       106 ~g~iD~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  183 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSS  183 (272)
T ss_dssp             TCCCSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred             CCCCcEEEECCCcCCC--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHH
Confidence            9999999999998754  67788889999999999999999999999999988878999999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHC---CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          172 KHAVLGLNKNVAAELG---KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       172 K~al~~~~~~la~e~~---~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      |++++.+++.++.|++   ++||++++|+||+++|++....             ...        .+++.+|+|+|++++
T Consensus       184 K~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-------------~~~--------~~~~~~~~dva~~i~  242 (272)
T 1yb1_A          184 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-------------STS--------LGPTLEPEEVVNRLM  242 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-------------HHH--------HCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-------------ccc--------ccCCCCHHHHHHHHH
Confidence            9999999999999996   6799999999999999984320             000        167889999999999


Q ss_pred             HhcCCCCC
Q 023613          249 FLASDEAR  256 (280)
Q Consensus       249 ~L~s~~~~  256 (280)
                      +++.....
T Consensus       243 ~~~~~~~~  250 (272)
T 1yb1_A          243 HGILTEQK  250 (272)
T ss_dssp             HHHHTTCS
T ss_pred             HHHHcCCC
Confidence            99976554

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.7e-40  Score=275.57  Aligned_cols=217  Identities=21%  Similarity=0.247  Sum_probs=157.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|||+++|++|++ |+.|++++|+.+.++.+.+    ...+.++.+|+++.++ .+.+.+..+.+++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~   75 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----IEGVEPIESDIVKEVL-EEGGVDKLKNLDH   75 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----STTEEEEECCHHHHHH-TSSSCGGGTTCSC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----hcCCcceecccchHHH-HHHHHHHHHhcCC
Confidence            47899999999999999999999998 9999999999887776654    2357889999998877 4444455566789


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.++...|++||+|
T Consensus        76 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  152 (245)
T 3e9n_A           76 VDTLVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHA  152 (245)
T ss_dssp             CSEEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHH
T ss_pred             CCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHH
Confidence            9999999999765  7788899999999999999999999999999997654 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++.|++.++.|++++||+|++|+||+++|++..........               ....+++.+|+|+|+++++|++..
T Consensus       153 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---------------~~~~~~~~~p~dvA~~i~~l~~~~  217 (245)
T 3e9n_A          153 LRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGT---------------NFRPEIYIEPKEIANAIRFVIDAG  217 (245)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCGGGSCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhc---------------ccccccCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999987654332110               011256789999999999999865


Q ss_pred             C
Q 023613          255 A  255 (280)
Q Consensus       255 ~  255 (280)
                      .
T Consensus       218 ~  218 (245)
T 3e9n_A          218 E  218 (245)
T ss_dssp             T
T ss_pred             C
Confidence            5

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-38  Score=274.43  Aligned_cols=221  Identities=26%  Similarity=0.335  Sum_probs=187.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCH-HHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKE-EDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~-~~~~~~~~~~~~~   91 (280)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  .++.++.+|+++. ++++++++.+.+.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999998888877776432  4788999999998 9999999999999


Q ss_pred             cCCccEEEECCCCCCCC----------------------------CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcc
Q 023613           92 FGTLDIMVNNAGISGAP----------------------------CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI  143 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  143 (280)
                      ++++|+||||||+....                            ...+.+.+.++|++.+++|+.+++.++++++|.|.
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            99999999999987420                            02456778999999999999999999999999998


Q ss_pred             cCCCceEEEEccccccccC-------------------------------------------CCCccchhhHHHHHHHHH
Q 023613          144 PQTKGTIISICSVAGAIGG-------------------------------------------LGPHAYTGSKHAVLGLNK  180 (280)
Q Consensus       144 ~~~~~~iv~isS~~~~~~~-------------------------------------------~~~~~Y~~sK~al~~~~~  180 (280)
                      +++.++||++||..+..+.                                           ++...|++||+|++.|++
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence            8888999999999887653                                           355789999999999999


Q ss_pred             HHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeee
Q 023613          181 NVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG  260 (280)
Q Consensus       181 ~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G  260 (280)
                      .++.++++  |+||+|+||+|+|++.....                          ..++++.++.+++++.......+|
T Consensus       249 ~la~e~~~--i~v~~v~PG~v~T~~~~~~~--------------------------~~~~~~~a~~~~~~~~~~~~~~~g  300 (311)
T 3o26_A          249 VLANKIPK--FQVNCVCPGLVKTEMNYGIG--------------------------NYTAEEGAEHVVRIALFPDDGPSG  300 (311)
T ss_dssp             HHHHHCTT--SEEEEECCCSBCSGGGTTCC--------------------------SBCHHHHHHHHHHHHTCCSSCCCS
T ss_pred             HHHhhcCC--ceEEEecCCceecCCcCCCC--------------------------CCCHHHHHHHHHHHHhCCCCCCCc
Confidence            99999964  99999999999999865431                          237899999999998755444455


Q ss_pred             cEE
Q 023613          261 TNL  263 (280)
Q Consensus       261 ~~i  263 (280)
                      ..+
T Consensus       301 ~~~  303 (311)
T 3o26_A          301 FFY  303 (311)
T ss_dssp             CEE
T ss_pred             eEe
Confidence            544

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=4e-39  Score=281.38  Aligned_cols=243  Identities=20%  Similarity=0.227  Sum_probs=186.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH---HHHHHhC----CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ---QVCQSLG----GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~---~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ++|++|||||++|||+++|++|+++|++|++++|+...++   +..+...    ...++.++.+|++++++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4799999999999999999999999999888877654332   2222221    12578899999999999999999883


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                        ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+
T Consensus        81 --~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             --TSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             --cCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH
Confidence              4899999999998754  678889999999999999999999999999999877789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhh-----hhhhhHHHHHhhhccCCCCC-CCHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-----DAMVGFRNFVARNANMQGTE-LTANDV  243 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~dv  243 (280)
                      +||++++.|++.++.|++++||+|++|+||+|+|++............     .....+..+......+.+++ .+|+|+
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  236 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV  236 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHH
Confidence            999999999999999999999999999999999999765332211000     00000111111000011233 589999


Q ss_pred             HHHHHHhcCC---CCCCeeecEE
Q 023613          244 ANAVLFLASD---EARYISGTNL  263 (280)
Q Consensus       244 a~~~~~L~s~---~~~~~~G~~i  263 (280)
                      |++++++++.   ..+|++|+.+
T Consensus       237 A~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          237 AEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHcCCCCCeEEEeCchH
Confidence            9999999874   3557888754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=8.2e-40  Score=276.27  Aligned_cols=221  Identities=25%  Similarity=0.358  Sum_probs=174.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||++|||+++|++|+++|++|++++|+++.++.         .   +.+|+++.++++++++++   .+++|+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~---~~~Dl~~~~~v~~~~~~~---~~~id~l   66 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------D---LSTAEGRKQAIADVLAKC---SKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------C---TTSHHHHHHHHHHHHTTC---TTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------c---cccCCCCHHHHHHHHHHh---CCCCCEE
Confidence            689999999999999999999999999999998764321         1   568999999988877633   2799999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-------------------
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-------------------  159 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-------------------  159 (280)
                      |||||+....         +.|++.+++|+.+++.++++++|.|.+++.++||++||..+.                   
T Consensus        67 v~~Ag~~~~~---------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           67 VLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EECCCCCCCc---------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            9999986411         238999999999999999999999988777999999999887                   


Q ss_pred             ---------ccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh
Q 023613          160 ---------IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       160 ---------~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                               .+.++...|++||++++.+++.++.|++++||+|++|+||+++|++.....+...        ...+....
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~  209 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR--------YGESIAKF  209 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------------C
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchh--------HHHHHHhc
Confidence                     3445678999999999999999999999999999999999999998765322110        01111110


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          231 ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ..+.+++.+|+|+|+++++|+++...+++|+.+.+|||+..
T Consensus       210 ~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          210 VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             ccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            23347899999999999999998888999999999999754

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=3.4e-38  Score=281.26  Aligned_cols=249  Identities=12%  Similarity=0.012  Sum_probs=198.0

Q ss_pred             cCCcEEEEEcCCChHHHH--HHHHHHHcCCeEEEEecCcch------------HHHHHHHhC-CCCCeEEEecCCCCHHH
Q 023613           16 LVGRVALITGGATGIGES--TVRLFHKHGAKVCIADVQDNL------------GQQVCQSLG-GEPDTFFCHCDVTKEED   80 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~--la~~l~~~g~~V~~~~r~~~~------------~~~~~~~~~-~~~~~~~~~~D~~~~~~   80 (280)
                      +.||++|||||++|||++  +++.|+++|++|++++|+.+.            .+.+.+... ...++.++.||++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            579999999999999999  999999999999999986543            122222222 23568889999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCC-----------CCCCC---------------------CCCCHHHHHHHhhhhh
Q 023613           81 VCSAVDLTVEKFGTLDIMVNNAGISGA-----------PCPDI---------------------READLSEFEKVFDINV  128 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~d~li~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~  128 (280)
                      ++++++.+.+.+|++|+||||||....           ...++                     .+.+.++|++.+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            999999999999999999999997410           01233                     4679999999999999


Q ss_pred             HhHH-HHHHHHHHhcccCCCceEEEEccccccccCCCC--ccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCeeecc
Q 023613          129 KGVF-HGMKHAARIMIPQTKGTIISICSVAGAIGGLGP--HAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATG  204 (280)
Q Consensus       129 ~~~~-~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~T~  204 (280)
                      .+.+ .+++++.+.+....+|+||++||..+..+.|.+  +.|++||+|+++|+++|+.|+++ +|||||+|+||+++|+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9888 778888776544556999999999999999988  99999999999999999999999 9999999999999999


Q ss_pred             ccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccccccccc
Q 023613          205 LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      +.............   .+.        +.++..++|++++.+.+|+++  +..+|+.+.+|||....--.|+
T Consensus       298 ~s~~ip~~p~y~~~---~~~--------~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d~~e  357 (418)
T 4eue_A          298 ASAYIPTFPLYAAI---LYK--------VMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMDDLE  357 (418)
T ss_dssp             HHHTSTTHHHHHHH---HHH--------HHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESCTTT
T ss_pred             hhhcCCCCcHHHHH---HHH--------HHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCChhh
Confidence            97665322111100   011        115567899999999999987  5678999999986554333333

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=3.5e-37  Score=262.09  Aligned_cols=221  Identities=24%  Similarity=0.280  Sum_probs=188.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++|++|||||++|||++++++|++ +|++|++++|+.+..++..+.+.. ..++.++.+|+++.++++++++++.+.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3589999999999999999999999 999999999998877776666532 24688899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCC-HHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------
Q 023613           94 TLDIMVNNAGISGAPCPDIREAD-LSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------  161 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------  161 (280)
                      ++|+||||||+...  .. ...+ .+++++.+++|+.+++.+++.++|.|.+  .++||++||..+..+           
T Consensus        82 ~id~li~~Ag~~~~--~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~  156 (276)
T 1wma_A           82 GLDVLVNNAGIAFK--VA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQK  156 (276)
T ss_dssp             SEEEEEECCCCCCC--TT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             CCCEEEECCccccc--CC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhh
Confidence            99999999998754  22 3344 5889999999999999999999999865  489999999877632           


Q ss_pred             ------------------------------CCCCccchhhHHHHHHHHHHHHHHHCC----CCeEEEEEeCCeeeccccc
Q 023613          162 ------------------------------GLGPHAYTGSKHAVLGLNKNVAAELGK----YGIRVNCVSPYAVATGLAL  207 (280)
Q Consensus       162 ------------------------------~~~~~~Y~~sK~al~~~~~~la~e~~~----~gi~v~~v~pg~v~T~~~~  207 (280)
                                                    ..+...|+++|++++.|++.++.+++.    +||++++|+||+++|++..
T Consensus       157 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          157 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             ccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence                                          012379999999999999999999987    7999999999999999853


Q ss_pred             cCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC--CCCeeecEEEeCCc
Q 023613          208 AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE--ARYISGTNLMVDGG  268 (280)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i~~dgG  268 (280)
                      .                          .++.+|+|+|+++++|++..  ..+++|+.+. +++
T Consensus       237 ~--------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          237 P--------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             T--------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             c--------------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            2                          23569999999999999854  3689999987 555

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.2e-36  Score=261.04  Aligned_cols=218  Identities=17%  Similarity=0.205  Sum_probs=187.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++..  ..++.++.+|++|.++++++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999998887776655432  236788999999999999999999999


Q ss_pred             cCCccEEEEC-CCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           92 FGTLDIMVNN-AGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~-ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++||| +|...   .++.+.+.++|++.+++|+.+++.++++++|.|.+. .|+||++||..+..+.++...|++
T Consensus       104 ~g~iD~li~naag~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  179 (286)
T 1xu9_A          104 MGGLDMLILNHITNTS---LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSA  179 (286)
T ss_dssp             HTSCSEEEECCCCCCC---CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCccCCC---CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHH
Confidence            9999999999 56643   345567899999999999999999999999998654 589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHH--CCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ||++++.+++.++.|+  ...||++++|+||+++|++........         .          .....+|+|+|+.++
T Consensus       180 sK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~---------~----------~~~~~~~~~vA~~i~  240 (286)
T 1xu9_A          180 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI---------V----------HMQAAPKEECALEII  240 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG---------G----------GGGCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc---------c----------cCCCCCHHHHHHHHH
Confidence            9999999999999999  678999999999999999865322110         0          023579999999999


Q ss_pred             HhcCCC
Q 023613          249 FLASDE  254 (280)
Q Consensus       249 ~L~s~~  254 (280)
                      ..+...
T Consensus       241 ~~~~~~  246 (286)
T 1xu9_A          241 KGGALR  246 (286)
T ss_dssp             HHHHTT
T ss_pred             HHHhcC
Confidence            988654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1e-35  Score=299.35  Aligned_cols=241  Identities=20%  Similarity=0.268  Sum_probs=197.7

Q ss_pred             cccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHh----CC-CCCeEEEecCCCCHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATG-IGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSL----GG-EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        14 ~~l~~k~vlItGa~~g-iG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ++++||++|||||++| ||+++|+.|+++|++|+++ .|+.+.+++..+.+    .. ..++.++.||+++.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3588999999999998 9999999999999999998 57766665544433    22 3578889999999999999999


Q ss_pred             HHHHH-----cC-CccEEEECCCCCCCCCC-CCCCCC--HHHHHHHhhhhhHhHHHHHHHH--HHhcccCCCceEEEEcc
Q 023613           87 LTVEK-----FG-TLDIMVNNAGISGAPCP-DIREAD--LSEFEKVFDINVKGVFHGMKHA--ARIMIPQTKGTIISICS  155 (280)
Q Consensus        87 ~~~~~-----~~-~~d~li~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~iv~isS  155 (280)
                      .+.+.     +| ++|+||||||+...  . ++.+.+  .++|++++++|+.+++.+++.+  +|.|.+++.|+||++||
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~--~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS  828 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  828 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCC--SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECS
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcC
Confidence            99988     66 89999999998754  5 788888  8999999999999999999988  78887776789999999


Q ss_pred             ccccccCCCCccchhhHHHHHHH-HHHHHHHHCCCCeEEEEEeCCeee-ccccccCCCchhhhhhhhhhHHHHHhhhccC
Q 023613          156 VAGAIGGLGPHAYTGSKHAVLGL-NKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNANM  233 (280)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~al~~~-~~~la~e~~~~gi~v~~v~pg~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (280)
                      ..+..+  +...|++||+|+++| ++.++.+++++ |+||+|+||+++ |+|......           ......+ .+ 
T Consensus       829 ~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~-----------~~~~~~~-~p-  892 (1887)
T 2uv8_A          829 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI-----------IAEGIEK-MG-  892 (1887)
T ss_dssp             CTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCT-----------THHHHHT-TS-
T ss_pred             hHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchh-----------HHHHHHh-cC-
Confidence            998877  678999999999999 99999999988 999999999999 888653100           0111111 11 


Q ss_pred             CCCCCCHHHHHHHHHHhcCCC-CCCeeecEEEeC--Ccccccc
Q 023613          234 QGTELTANDVANAVLFLASDE-ARYISGTNLMVD--GGFTSVN  273 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~-~~~~~G~~i~~d--gG~~~~~  273 (280)
                       .+..+|+|+|+++++|+++. ..+++|+.+.+|  ||+....
T Consensus       893 -lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          893 -VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             -CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             -CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccc
Confidence             15669999999999999987 679999999875  9987654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-36  Score=296.15  Aligned_cols=242  Identities=20%  Similarity=0.245  Sum_probs=200.4

Q ss_pred             ccccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEE-ecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATG-IGESTVRLFHKHGAKVCIA-DVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~g-iG~~la~~l~~~g~~V~~~-~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~   85 (280)
                      .++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++..     ..++.++.||+++.+++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            34588999999999998 9999999999999999998 6776666555555521     246888999999999999999


Q ss_pred             HHHHHH-----cC-CccEEEECCCCCCCCCC-CCCCCC--HHHHHHHhhhhhHhHHHHHHHH--HHhcccCCCceEEEEc
Q 023613           86 DLTVEK-----FG-TLDIMVNNAGISGAPCP-DIREAD--LSEFEKVFDINVKGVFHGMKHA--ARIMIPQTKGTIISIC  154 (280)
Q Consensus        86 ~~~~~~-----~~-~~d~li~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~iv~is  154 (280)
                      +++.+.     ++ ++|+||||||+...  . ++.+.+  .++|++.+++|+.+++.+++.+  +|.|.+++.|+||++|
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~--g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS  628 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  628 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCC--SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence            999988     77 89999999998754  5 788888  9999999999999999999999  8888877678999999


Q ss_pred             cccccccCCCCccchhhHHHHHHH-HHHHHHHHCCCCeEEEEEeCCeee-ccccccCCCchhhhhhhhhhHHHHHhhhcc
Q 023613          155 SVAGAIGGLGPHAYTGSKHAVLGL-NKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNAN  232 (280)
Q Consensus       155 S~~~~~~~~~~~~Y~~sK~al~~~-~~~la~e~~~~gi~v~~v~pg~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
                      |..+..+  +...|++||+|+++| .+.++.++++. |+||+|+||+++ |++.......           ..... ..+
T Consensus       629 SiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~-----------~~~l~-~ip  693 (1688)
T 2pff_A          629 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNII-----------AEGIE-KMG  693 (1688)
T ss_dssp             SCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTC-----------STTTS-SSS
T ss_pred             ChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHH-----------HHHHH-hCC
Confidence            9998877  678999999999999 88888888887 999999999999 7875431000           00001 111


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCC-CCCeeecEEEeC--Ccccccc
Q 023613          233 MQGTELTANDVANAVLFLASDE-ARYISGTNLMVD--GGFTSVN  273 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~-~~~~~G~~i~~d--gG~~~~~  273 (280)
                        -+..+|+|+|+++++|+++. ..+++|+.+.+|  ||+....
T Consensus       694 --lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~  735 (1688)
T 2pff_A          694 --VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  735 (1688)
T ss_dssp             --CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSS
T ss_pred             --CCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecC
Confidence              15669999999999999987 679999999875  9987654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=7.2e-35  Score=237.28  Aligned_cols=200  Identities=17%  Similarity=0.140  Sum_probs=175.0

Q ss_pred             Cc-EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GR-VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k-~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +| ++|||||++|||++++++|+ +|++|++++|+.+                ++.+|++++++++++++.+    +++|
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~----~~~d   60 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQV----GKVD   60 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence            44 79999999999999999999 9999999999864                4679999999999888764    7999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  .++.+.+.++|++.+++|+.+++.+++++.+.|.+  .++||++||..+..+.++...|+++|++++
T Consensus        61 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  136 (202)
T 3d7l_A           61 AIVSATGSATF--SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVT  136 (202)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence            99999998754  67888999999999999999999999999999864  389999999999999899999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  256 (280)
                      .+++.++.|+ ++||++++++||++.|++....                    ...+..++++++|+|++++++++   .
T Consensus       137 ~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~--------------------~~~~~~~~~~~~dva~~~~~~~~---~  192 (202)
T 3d7l_A          137 AFAKSAAIEM-PRGIRINTVSPNVLEESWDKLE--------------------PFFEGFLPVPAAKVARAFEKSVF---G  192 (202)
T ss_dssp             HHHHHHTTSC-STTCEEEEEEECCBGGGHHHHG--------------------GGSTTCCCBCHHHHHHHHHHHHH---S
T ss_pred             HHHHHHHHHc-cCCeEEEEEecCccCCchhhhh--------------------hhccccCCCCHHHHHHHHHHhhh---c
Confidence            9999999999 7899999999999999974210                    00112578899999999999883   4


Q ss_pred             CeeecEEEeC
Q 023613          257 YISGTNLMVD  266 (280)
Q Consensus       257 ~~~G~~i~~d  266 (280)
                      +++|+.+++|
T Consensus       193 ~~~G~~~~vd  202 (202)
T 3d7l_A          193 AQTGESYQVY  202 (202)
T ss_dssp             CCCSCEEEEC
T ss_pred             cccCceEecC
Confidence            7899999987

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.5e-34  Score=290.36  Aligned_cols=240  Identities=20%  Similarity=0.251  Sum_probs=196.8

Q ss_pred             cccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEe-cCcchHHHHH----HHhCC-CCCeEEEecCCCCHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATG-IGESTVRLFHKHGAKVCIAD-VQDNLGQQVC----QSLGG-EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        14 ~~l~~k~vlItGa~~g-iG~~la~~l~~~g~~V~~~~-r~~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ++++||++|||||++| ||+++|++|+++|++|++++ |+.+.+.+..    +.+.. ..++.++.||++|.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3588999999999999 99999999999999999985 5555554333    33332 3578889999999999999999


Q ss_pred             HHHHH---cC-CccEEEECCCCCCCCCC-CCCCCC--HHHHHHHhhhhhHhHHHHHHH--HHHhcccCCCceEEEEcccc
Q 023613           87 LTVEK---FG-TLDIMVNNAGISGAPCP-DIREAD--LSEFEKVFDINVKGVFHGMKH--AARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        87 ~~~~~---~~-~~d~li~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~~iv~isS~~  157 (280)
                      ++.+.   +| ++|+||||||+...  . ++.+.+  .++|++++++|+.+++.+++.  +++.|.+++.|+||++||..
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~--~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~a  805 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPEN--GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNH  805 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCT--TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccC--CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchh
Confidence            99988   88 99999999998754  5 788888  899999999999999999987  77888777678999999999


Q ss_pred             ccccCCCCccchhhHHHHHHHHHHHHH-HHCCCCeEEEEEeCCeee-ccccccCCCchhhhhhhhhhHHHHHhhhccCCC
Q 023613          158 GAIGGLGPHAYTGSKHAVLGLNKNVAA-ELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNANMQG  235 (280)
Q Consensus       158 ~~~~~~~~~~Y~~sK~al~~~~~~la~-e~~~~gi~v~~v~pg~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (280)
                      +..+  +...|++||+|+++|++.++. +++++ |+||+|+||+++ |+|....    ..       ......+ .+  -
T Consensus       806 g~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~----~~-------~~~~~~~-~p--l  868 (1878)
T 2uv9_A          806 GTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN----NL-------VAEGVEK-LG--V  868 (1878)
T ss_dssp             SSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH----HH-------THHHHHT-TT--C
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc----hh-------hHHHHHh-cC--C
Confidence            8877  578999999999999887655 57776 999999999999 9985431    00       1111111 11  1


Q ss_pred             CCCCHHHHHHHHHHhcCCCC-CCeeecEEEe--CCccccc
Q 023613          236 TELTANDVANAVLFLASDEA-RYISGTNLMV--DGGFTSV  272 (280)
Q Consensus       236 ~~~~~~dva~~~~~L~s~~~-~~~~G~~i~~--dgG~~~~  272 (280)
                      +..+|+|+|+++++|+++.. .+++|+.+.+  |||+...
T Consensus       869 r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          869 RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            56699999999999999876 7999999986  5998764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=3.8e-34  Score=233.70  Aligned_cols=200  Identities=23%  Similarity=0.242  Sum_probs=171.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||++|||++++++|+++  +|++++|+.+..+...+.+..    .++.+|++|++++++++++    ++++|++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~----~~~~~D~~~~~~~~~~~~~----~~~id~v   70 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA----RALPADLADELEAKALLEE----AGPLDLL   70 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC----EECCCCTTSHHHHHHHHHH----HCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC----cEEEeeCCCHHHHHHHHHh----cCCCCEE
Confidence            68999999999999999999998  999999998888777666652    7788999999999998886    6899999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      |||||....  .++.+.+.++|++.+++|+.+++.+++++    .+.+.++||++||..+..+.++...|+++|++++.+
T Consensus        71 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           71 VHAVGKAGR--ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY  144 (207)
T ss_dssp             EECCCCCCC--BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred             EECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence            999998754  67888899999999999999999999987    234458999999999999989999999999999999


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      ++.++.+++++||++++++||++.|++.....                     .+.+++++|+|+|++++++++...
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~---------------------~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWAPLG---------------------GPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGGGGT---------------------SCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCccccC---------------------CCCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999832110                     112678999999999999997654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=9.8e-35  Score=244.32  Aligned_cols=222  Identities=28%  Similarity=0.326  Sum_probs=181.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||++|||++++++|+++|++|++++|+.+..+.            .+.+|+++.++++++++++   .+++|+|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~D~~~~~~~~~~~~~~---~~~~d~v   66 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------------DLSTPGGRETAVAAVLDRC---GGVLDGL   66 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHHHH---TTCCSEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------------cccCCcccHHHHHHHHHHc---CCCccEE
Confidence            689999999999999999999999999999998764321            1568999999988887754   3799999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC----------------
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG----------------  162 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~----------------  162 (280)
                      |||||....         .+++++.+++|+.+++.+++++.+.|.+.+.++||++||..+..+.                
T Consensus        67 i~~Ag~~~~---------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           67 VCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EECCCCCTT---------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EECCCCCCc---------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            999997541         1348999999999999999999999987777999999999887654                


Q ss_pred             ----------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc
Q 023613          163 ----------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN  232 (280)
Q Consensus       163 ----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (280)
                                ++...|+++|++++.+++.++.+++++|+++++++||.+.|++.....+...        ...+......
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~--------~~~~~~~~~~  209 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPR--------YGESTRRFVA  209 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTT--------THHHHHSCCC
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchh--------hHHHHHHHHH
Confidence                      4567899999999999999999998889999999999999998654211110        0111111100


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      +.+++++++|+|+++++++++...+++|+.+.+|||....
T Consensus       210 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          210 PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            3478999999999999999887778999999999998654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=1e-32  Score=254.23  Aligned_cols=220  Identities=14%  Similarity=0.112  Sum_probs=180.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEE-ecCc-------------chHHHHHHHhCC-CCCeEEEecCCCCHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIA-DVQD-------------NLGQQVCQSLGG-EPDTFFCHCDVTKEE   79 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~-~r~~-------------~~~~~~~~~~~~-~~~~~~~~~D~~~~~   79 (280)
                      -++|++|||||++|||+++|++|+++|++ |+++ +|+.             +..+++.+++.. ..++.++.||++|.+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            36999999999999999999999999998 7777 8883             444555555532 357889999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccc
Q 023613           80 DVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAG  158 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~  158 (280)
                      +++++++++. .++++|+||||||+...  ..+.+.+.++|++.+++|+.+++++.+.+.+.+.+++ .++||++||.++
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~~~--~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTVDS--EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence            9999999998 68999999999999876  8899999999999999999999999999999997765 689999999999


Q ss_pred             cccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCC
Q 023613          159 AIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL  238 (280)
Q Consensus       159 ~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
                      ..+.+++..|+++|+++++|+    .+++.+||++++|+||+++|+|.....            ....+.+. .  -..+
T Consensus       406 ~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~------------~~~~~~~~-g--~~~l  466 (525)
T 3qp9_A          406 IWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGA------------TGERLRRL-G--LRPL  466 (525)
T ss_dssp             TTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSH------------HHHHHHHT-T--BCCB
T ss_pred             cCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchh------------hHHHHHhc-C--CCCC
Confidence            999999999999999998874    567788999999999999999864210            00111111 1  2457


Q ss_pred             CHHHHHHHHHHhcCCCCCC
Q 023613          239 TANDVANAVLFLASDEARY  257 (280)
Q Consensus       239 ~~~dva~~~~~L~s~~~~~  257 (280)
                      +|+++++++.++++.....
T Consensus       467 ~pee~a~~l~~~l~~~~~~  485 (525)
T 3qp9_A          467 APATALTALDTALGHGDTA  485 (525)
T ss_dssp             CHHHHHHHHHHHHHHTCSE
T ss_pred             CHHHHHHHHHHHHhCCCCe
Confidence            9999999999999765543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=5.4e-31  Score=276.25  Aligned_cols=240  Identities=20%  Similarity=0.184  Sum_probs=180.9

Q ss_pred             ccCCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATG-IGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        15 ~l~~k~vlItGa~~g-iG~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .|+||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++... .++..+.||+++++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            488999999999999 9999999999999999999998776     66666666543 4678899999999999999999


Q ss_pred             HHH----HcCCccEEEECCCCCC---CCCCCCCCCCHHH----HHHHhhhhhHhHHHHHHHHHHhcccCCCc----eEEE
Q 023613           88 TVE----KFGTLDIMVNNAGISG---APCPDIREADLSE----FEKVFDINVKGVFHGMKHAARIMIPQTKG----TIIS  152 (280)
Q Consensus        88 ~~~----~~~~~d~li~~ag~~~---~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~----~iv~  152 (280)
                      +.+    .+|++|+||||||+..   +......+.+.++    ++..+++|+.+.+.+++.+.+.|.+...+    .++.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            998    8899999999999821   0001222233333    45559999999999999999998776532    2333


Q ss_pred             EccccccccCCCCccchhhHHHHHHHHHHHHHH--HCCCCeEEEEEeCCeee-ccccccCCCchhhhhhhhhhHHHHHhh
Q 023613          153 ICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE--LGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVAR  229 (280)
Q Consensus       153 isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e--~~~~gi~v~~v~pg~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (280)
                      +++..+.  .++...|++||+|+++|+++++.|  +++ +|+||+++||+++ |++....-..           .....+
T Consensus      2293 ~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~~-----------~~~~~~ 2358 (3089)
T 3zen_D         2293 GSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDAI-----------VSAVEE 2358 (3089)
T ss_dssp             ECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTTT-----------HHHHGG
T ss_pred             CCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchhH-----------HHHHHh
Confidence            3333322  235568999999999999999999  665 6999999999999 7664321110           011111


Q ss_pred             hccCCCCCCCHHHHHHHHHHhcCCCCCCe-eecEEEeC--Ccccc
Q 023613          230 NANMQGTELTANDVANAVLFLASDEARYI-SGTNLMVD--GGFTS  271 (280)
Q Consensus       230 ~~~~~~~~~~~~dva~~~~~L~s~~~~~~-~G~~i~~d--gG~~~  271 (280)
                        .. .+..+|+|+|++++||+|+..+++ +|+.+.+|  ||+..
T Consensus      2359 --~~-~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2359 --AG-VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             --GS-CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             --cC-CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence              11 234499999999999999887755 56666655  99965

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=1.1e-29  Score=231.66  Aligned_cols=215  Identities=14%  Similarity=0.211  Sum_probs=171.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc---chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD---NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~---~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +|++|||||++|||+++|++|+++|+ +|++++|+.   +..+++.+++.. ..++.++.||++|++++.++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            59999999999999999999999999 688999964   334455555433 357889999999999999999998766 


Q ss_pred             CCccEEEECCCCC-CCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGIS-GAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|+||||||+. ..  ..+.+.+.++|++.+++|+.+++++.+.+.+.    ..++||++||..+..+.+++..|+++
T Consensus       318 g~ld~vVh~AGv~~~~--~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~YaAa  391 (496)
T 3mje_A          318 APLTAVFHSAGVAHDD--APVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYAAA  391 (496)
T ss_dssp             SCEEEEEECCCCCCSC--CCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHHHH
T ss_pred             CCCeEEEECCcccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHHHH
Confidence            7999999999997 44  78999999999999999999999999887664    45799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+++++|++.+    ..+||++++|+||++.+..........          ..+ .+. .  -...+|+++++++.+++
T Consensus       392 Ka~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~~~~~----------~~l-~~~-g--~~~l~pe~~~~~l~~~l  453 (496)
T 3mje_A          392 NAYLDALAEHR----RSLGLTASSVAWGTWGEVGMATDPEVH----------DRL-VRQ-G--VLAMEPEHALGALDQML  453 (496)
T ss_dssp             HHHHHHHHHHH----HHTTCCCEEEEECEESSSCC------C----------HHH-HHT-T--EEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH----HhcCCeEEEEECCcccCCccccChHHH----------HHH-Hhc-C--CCCCCHHHHHHHHHHHH
Confidence            99999888754    456999999999999776543211100          001 110 0  12359999999999998


Q ss_pred             CCCCCC
Q 023613          252 SDEARY  257 (280)
Q Consensus       252 s~~~~~  257 (280)
                      ......
T Consensus       454 ~~~~~~  459 (496)
T 3mje_A          454 ENDDTA  459 (496)
T ss_dssp             HHTCSE
T ss_pred             cCCCce
Confidence            765443

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=5.1e-29  Score=207.51  Aligned_cols=209  Identities=15%  Similarity=0.166  Sum_probs=161.0

Q ss_pred             CccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCe-EEEecCCCCHHHHHHHHHHH
Q 023613           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDT-FFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++...++++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+     ..+ .++.+|++         +.+
T Consensus        13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-----~~~~~~~~~Dl~---------~~~   78 (236)
T 3e8x_A           13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-----RGASDIVVANLE---------EDF   78 (236)
T ss_dssp             --------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----TTCSEEEECCTT---------SCC
T ss_pred             cccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-----CCCceEEEcccH---------HHH
Confidence            445667899999999999999999999999999999999999887766543     256 78999998         334


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC---CCC
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---LGP  165 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---~~~  165 (280)
                      .+.++++|+||||||....          +++++.+++|+.++.++++++..    .+.++||++||..+..+.   +..
T Consensus        79 ~~~~~~~D~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~  144 (236)
T 3e8x_A           79 SHAFASIDAVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMNM  144 (236)
T ss_dssp             GGGGTTCSEEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGGG
T ss_pred             HHHHcCCCEEEECCCCCCC----------CCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhhh
Confidence            4556799999999997532          45899999999999999999855    345799999997776654   466


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+.+|++++.+++       ..|++++.++||.+.++..........               .......+++++|+|+
T Consensus       145 ~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~---------------~~~~~~~~i~~~Dva~  202 (236)
T 3e8x_A          145 RHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP---------------HFSEITRSITRHDVAK  202 (236)
T ss_dssp             HHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES---------------SCSCCCCCEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc---------------CCCcccCcEeHHHHHH
Confidence            899999999999876       468999999999999986433221110               0011256889999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++++++...  ..|+.+++++|..
T Consensus       203 ~~~~~~~~~~--~~g~~~~v~~~~~  225 (236)
T 3e8x_A          203 VIAELVDQQH--TIGKTFEVLNGDT  225 (236)
T ss_dssp             HHHHHTTCGG--GTTEEEEEEECSE
T ss_pred             HHHHHhcCcc--ccCCeEEEeCCCc
Confidence            9999997643  7899999988853

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.7e-29  Score=243.04  Aligned_cols=220  Identities=15%  Similarity=0.227  Sum_probs=177.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHH-HcCCe-EEEEecC---cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFH-KHGAK-VCIADVQ---DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~-~~g~~-V~~~~r~---~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+|++|||||++|||+++|++|+ ++|++ |++++|+   .+..++..+++.. ..++.++.||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999 79995 9999998   4455566666543 35788999999999999999999887


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .+ ++|++|||||+...  ..+.+.+.++|++.+++|+.+++++.+++.|.|      +||++||.++..+.+++..|++
T Consensus       609 ~~-~id~lVnnAGv~~~--~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaA  679 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDD--GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAA  679 (795)
T ss_dssp             TS-CEEEEEECCCCCCC--CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHH
T ss_pred             hC-CCEEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHH
Confidence            76 99999999999876  889999999999999999999999999987766      7999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+    |++.++++++.+||++|+|+||++.|++........         ....+.+ ..  ...++++++...+..+
T Consensus       680 aka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~---------~~~~~~~-~g--~~~l~~~e~~~~~~~~  743 (795)
T 3slk_A          680 ANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREA---------EQDRLAR-SG--LLPISTEEGLSQFDAA  743 (795)
T ss_dssp             HHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHH---------HHHHHHH-TT--BCCCCHHHHHHHHHHH
T ss_pred             HHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHH---------HHHHHHh-cC--CCCCCHHHHHHHHHHH
Confidence            996    566666777788999999999999988643321110         1111111 11  2346888888888777


Q ss_pred             cCCCCCCeeec
Q 023613          251 ASDEARYISGT  261 (280)
Q Consensus       251 ~s~~~~~~~G~  261 (280)
                      +......+...
T Consensus       744 l~~~~~~~~~~  754 (795)
T 3slk_A          744 CGGAHTVVAPV  754 (795)
T ss_dssp             HTSSCSSCCCC
T ss_pred             HhCCCcEEEEE
Confidence            76555444433

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=5.8e-28  Score=220.87  Aligned_cols=214  Identities=17%  Similarity=0.172  Sum_probs=169.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcc---hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDN---LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~---~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      -.+|++|||||++|||++++++|+++|++ |++++|+.+   ..+++.+++.. ..++.++.||++|.+++.++++.+ +
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            35899999999999999999999999996 999999864   34444444432 357889999999999999999988 5


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      .++++|+||||||+...  ..+.+.+.+++++.+++|+.+.+++.+.+.+    .+.++||++||..+..+.++...|++
T Consensus       303 ~~g~ld~VIh~AG~~~~--~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaa  376 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAP  376 (486)
T ss_dssp             TTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHH
T ss_pred             hcCCCcEEEECCccCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHH
Confidence            56899999999999865  7788999999999999999999999987654    34589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecc-ccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATG-LALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +|++++.|++.+    ..+|+++++|+||++.++ |......             ..+.+   .--..++++|+++++..
T Consensus       377 aka~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~~~-------------~~~~~---~g~~~i~~e~~a~~l~~  436 (486)
T 2fr1_A          377 GNAYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGPVA-------------DRFRR---HGVIEMPPETACRALQN  436 (486)
T ss_dssp             HHHHHHHHHHHH----HHTTCCCEEEEECCBC-------------------------CTT---TTEECBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchhHH-------------HHHHh---cCCCCCCHHHHHHHHHH
Confidence            999999887654    446899999999999886 3221100             00000   00136799999999999


Q ss_pred             hcCCCCC
Q 023613          250 LASDEAR  256 (280)
Q Consensus       250 L~s~~~~  256 (280)
                      ++.....
T Consensus       437 ~l~~~~~  443 (486)
T 2fr1_A          437 ALDRAEV  443 (486)
T ss_dssp             HHHTTCS
T ss_pred             HHhCCCC
Confidence            9876543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=5.1e-27  Score=215.54  Aligned_cols=209  Identities=21%  Similarity=0.279  Sum_probs=169.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcc---hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDN---LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~---~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+|++|||||++|||++++++|+++|+ +|++++|+..   ..+++.+++.. ..++.++.||++|.+++.++++.    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            589999999999999999999999999 5999999863   34555555543 35788999999999999988876    


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|+||||||+...  ..+.+.+.+++++.+++|+.+.+++.+.+.+.   .+.++||++||..+..+.++...|+++
T Consensus       334 -~~ld~VVh~AGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~Yaaa  407 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDD--AVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAA  407 (511)
T ss_dssp             -SCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHH
T ss_pred             -CCCcEEEECCcccCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHH
Confidence             689999999999865  77889999999999999999999998875432   145899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCee-eccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAV-ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      |++++.|++.+    ..+|+++++|+||++ +|.|....   ..         ..+ .+. .  -..++++|+++++..+
T Consensus       408 Ka~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~---~~---------~~~-~~~-g--~~~l~~e~~a~~l~~a  467 (511)
T 2z5l_A          408 NAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGA---GE---------ESL-SRR-G--LRAMDPDAAVDALLGA  467 (511)
T ss_dssp             HHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCH---HH---------HHH-HHH-T--BCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccc---cH---------HHH-Hhc-C--CCCCCHHHHHHHHHHH
Confidence            99999998764    456999999999999 77775331   00         000 011 0  2467999999999999


Q ss_pred             cCCCC
Q 023613          251 ASDEA  255 (280)
Q Consensus       251 ~s~~~  255 (280)
                      +....
T Consensus       468 l~~~~  472 (511)
T 2z5l_A          468 MGRND  472 (511)
T ss_dssp             HHHTC
T ss_pred             HhCCC
Confidence            86544

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=5.9e-27  Score=198.72  Aligned_cols=194  Identities=16%  Similarity=0.140  Sum_probs=155.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++|++|||||+|+||++++++|+++|++|++++|++....        ...+.++.+|++|.+++.++++       ++|
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~-------~~D   66 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVA-------GCD   66 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHc-------CCC
Confidence            4789999999999999999999999999999999875432        3578899999999999888776       899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc------------ccCCC
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA------------IGGLG  164 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~------------~~~~~  164 (280)
                      +||||||...          .++|++.+++|+.+++++++++.+    .+.++||++||..+.            .+.++
T Consensus        67 ~vi~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~  132 (267)
T 3rft_A           67 GIVHLGGISV----------EKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPARP  132 (267)
T ss_dssp             EEEECCSCCS----------CCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCC
T ss_pred             EEEECCCCcC----------cCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCCCC
Confidence            9999999742          235789999999999999999854    456899999998876            33455


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|+.||++.+.+++.++.++   |++++.|.||.+.++.....     .       .           ..+++++|++
T Consensus       133 ~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~-----~-------~-----------~~~~~~~d~a  186 (267)
T 3rft_A          133 DGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYR-----M-------L-----------STWFSHDDFV  186 (267)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTT-----H-------H-----------HHBCCHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCC-----c-------e-----------eeEEcHHHHH
Confidence            6899999999999999999885   68899999999987742211     0       0           2356899999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCC
Q 023613          245 NAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      +.+..++....  ..+.++.+.+
T Consensus       187 ~~~~~~~~~~~--~~~~~~~~~s  207 (267)
T 3rft_A          187 SLIEAVFRAPV--LGCPVVWGAS  207 (267)
T ss_dssp             HHHHHHHHCSC--CCSCEEEECC
T ss_pred             HHHHHHHhCCC--CCceEEEEeC
Confidence            99999886542  2334444443

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=7.7e-26  Score=198.67  Aligned_cols=224  Identities=17%  Similarity=0.151  Sum_probs=172.1

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHc-CC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKH-GA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +....+++|++|||||+|+||++++++|+++ |+ +|++++|++.......+.+.. ..+.++.+|++|.+++.++++  
T Consensus        14 ~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~--   90 (344)
T 2gn4_A           14 NHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND-PRMRFFIGDVRDLERLNYALE--   90 (344)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC-TTEEEEECCTTCHHHHHHHTT--
T ss_pred             cHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC-CCEEEEECCCCCHHHHHHHHh--
Confidence            3344578999999999999999999999999 98 899999998877766666542 478899999999988876654  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                           ++|+|||+||....      .....+..+.+++|+.++.++++++.+.    +.++||++||..+..|   ...|
T Consensus        91 -----~~D~Vih~Aa~~~~------~~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~~Y  152 (344)
T 2gn4_A           91 -----GVDICIHAAALKHV------PIAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP---INLY  152 (344)
T ss_dssp             -----TCSEEEECCCCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CSHH
T ss_pred             -----cCCEEEECCCCCCC------CchhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC---ccHH
Confidence                 79999999997532      1122346789999999999999999874    3579999999876543   4789


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc--------cCCCCCCCH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------NMQGTELTA  240 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  240 (280)
                      +++|++.+.+++.++.+++..|++++++.||.+.++.... .+          .+........        .....++++
T Consensus       153 ~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~-i~----------~~~~~~~~g~~~~~i~~~~~~r~~i~v  221 (344)
T 2gn4_A          153 GATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV-VP----------FFKKLVQNKASEIPITDIRMTRFWITL  221 (344)
T ss_dssp             HHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSH-HH----------HHHHHHHHTCCCEEESCTTCEEEEECH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCH-HH----------HHHHHHHcCCCceEEeCCCeEEeeEEH
Confidence            9999999999999998888889999999999999875210 00          0111111110        011347899


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      +|+|+++++++...   ..|+++.++++.
T Consensus       222 ~D~a~~v~~~l~~~---~~g~~~~~~~~~  247 (344)
T 2gn4_A          222 DEGVSFVLKSLKRM---HGGEIFVPKIPS  247 (344)
T ss_dssp             HHHHHHHHHHHHHC---CSSCEEEECCCE
T ss_pred             HHHHHHHHHHHhhc---cCCCEEecCCCc
Confidence            99999999998653   267888887764

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=1.3e-25  Score=184.96  Aligned_cols=201  Identities=9%  Similarity=0.017  Sum_probs=150.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFH-KHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|++|||||+|+||++++++|+ +.|++|++++|+++ .++.+.+   ....+.++.+|++|++++.++++       ++
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII---DHERVTVIEGSFQNPGXLEQAVT-------NA   74 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH---TSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc---CCCceEEEECCCCCHHHHHHHHc-------CC
Confidence            3789999999999999999999 89999999999987 6554431   23578899999999999887765       78


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc---------
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH---------  166 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~---------  166 (280)
                      |+||||||..                     |+.     ++.+++.+.+.+.++||++||..+..+.+...         
T Consensus        75 d~vv~~ag~~---------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~  128 (221)
T 3r6d_A           75 EVVFVGAMES---------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLP  128 (221)
T ss_dssp             SEEEESCCCC---------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSC
T ss_pred             CEEEEcCCCC---------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccc
Confidence            9999999842                     222     67777777777778999999998877655433         


Q ss_pred             -cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          167 -AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       167 -~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                       .|+.+|.+++.+.+.       .|++++.|+||++.++..........              ......+.+++++|+|+
T Consensus       129 ~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~dvA~  187 (221)
T 3r6d_A          129 ISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP--------------EGAQFNDAQVSREAVVK  187 (221)
T ss_dssp             HHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC--------------TTSCCCCCEEEHHHHHH
T ss_pred             cHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc--------------CCccCCCceeeHHHHHH
Confidence             899999999987753       58999999999998873222111100              01112245789999999


Q ss_pred             HHHHhc--CCCCCCeeecEEEeCCcccccccc
Q 023613          246 AVLFLA--SDEARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       246 ~~~~L~--s~~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      ++++++  ++...++++.....+.+.....++
T Consensus       188 ~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~  219 (221)
T 3r6d_A          188 AIFDILHAADETPFHRTSIGVGEPGTHYDXPS  219 (221)
T ss_dssp             HHHHHHTCSCCGGGTTEEEEEECTTCCCSSCC
T ss_pred             HHHHHHHhcChhhhhcceeeecCCCCCCCCCC
Confidence            999999  877766666555555544433333

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.94  E-value=2.8e-25  Score=194.68  Aligned_cols=229  Identities=17%  Similarity=0.111  Sum_probs=167.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      |++|||||+|+||++++++|++.|++|++++|+. .......+.+....++.++.+|++|.+++.++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            5799999999999999999999999999998853 222222233322346788999999999998888752     7999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------------
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------------  160 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------------  160 (280)
                      |||+||....      +.+.+++++.+++|+.++..+++++.+...   .++||++||.....                 
T Consensus        77 vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           77 CFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             EEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             EEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            9999996421      233557889999999999999999998753   26999999976432                 


Q ss_pred             ----------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh
Q 023613          161 ----------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       161 ----------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                                +..+...|+.+|++.+.+++.++.++   |++++.+.||.+.++........... .   ..........
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~-~---~~~~~~~~~~  220 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWV-G---WFCQKAVEIK  220 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHH-H---HHHHHHHHHH
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHH-H---HHHHHHHhCc
Confidence                      12345689999999999999999885   79999999999999975432111000 0   0011111111


Q ss_pred             ------ccC------CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          231 ------ANM------QGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       231 ------~~~------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                            ...      ...++.++|+|+++++++.. ....+|+.++++||.
T Consensus       221 ~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          221 NGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             TTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             ccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence                  000      12378999999999999863 235689999999985

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=2e-25  Score=195.35  Aligned_cols=238  Identities=15%  Similarity=0.122  Sum_probs=168.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+|++|||||+|+||++++++|+++|++|++++|+.+......+.+..  ...+.++.+|++|++++.++++.     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            478999999999999999999999999999999976654444333311  24678899999999999888875     48


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------cCC
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------GGL  163 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~~  163 (280)
                      +|+||||||....      ....+..++.+++|+.+...+++++..    .+.++||++||.....           +..
T Consensus        79 ~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~  148 (341)
T 3enk_A           79 ITAAIHFAALKAV------GESVAKPIEYYRNNLDSLLSLLRVMRE----RAVKRIVFSSSATVYGVPERSPIDETFPLS  148 (341)
T ss_dssp             CCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGBCSCSSSSBCTTSCCB
T ss_pred             CcEEEECcccccc------CccccChHHHHHHHHHHHHHHHHHHHh----CCCCEEEEEecceEecCCCCCCCCCCCCCC
Confidence            9999999997532      123345668899999999988887654    4457999999976542           222


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh--hhhhhhhHHHHHhhh-c---------
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARN-A---------  231 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~---------  231 (280)
                      +...|+.+|++.+.+++.++.++.  ++++..+.|+.+.++.....+.....  .......+....... .         
T Consensus       149 ~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  226 (341)
T 3enk_A          149 ATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDY  226 (341)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCcc
Confidence            346899999999999999998864  58999999999998854322211100  000001111111110 0         


Q ss_pred             -----cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          232 -----NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       232 -----~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                           .....++.++|+|++++.++........|+.+++++|...
T Consensus       227 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          227 PTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             CCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence                 0113478899999999999864222346899999988643

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.93  E-value=9.9e-26  Score=195.66  Aligned_cols=219  Identities=16%  Similarity=0.096  Sum_probs=165.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .+.|++|||||+|+||++++++|+++|++|++++|+... ..    +    .+.++.+|++|.+++.++++.     +++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l----~~~~~~~Dl~d~~~~~~~~~~-----~~~   75 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P----NVEMISLDIMDSQRVKKVISD-----IKP   75 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T----TEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c----eeeEEECCCCCHHHHHHHHHh-----cCC
Confidence            457899999999999999999999999999999998754 11    1    577889999999999888774     379


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-------------
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------------  162 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-------------  162 (280)
                      |+|||+||....      ..+.+++++.+++|+.++..+++++ +.+  .+.++||++||.......             
T Consensus        76 d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~  146 (321)
T 2pk3_A           76 DYIFHLAAKSSV------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQL  146 (321)
T ss_dssp             SEEEECCSCCCH------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC
T ss_pred             CEEEEcCcccch------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCC
Confidence            999999997532      1233468899999999999999998 554  235899999998754322             


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHh---h---------h
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA---R---------N  230 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~  230 (280)
                      ++...|+.+|++.+.+++.++.++   |++++.+.|+.+.++...........       ......   .         .
T Consensus       147 ~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~  216 (321)
T 2pk3_A          147 RPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDF-------AKQIVDIEMEKQEPIIKVGN  216 (321)
T ss_dssp             BCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHH-------HHHHHHHHTTSSCSEEEESC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHH-------HHHHHHHhcCCCCCeEEeCC
Confidence            456789999999999999998874   79999999999999875431100000       011111   1         0


Q ss_pred             ccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          231 ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 ~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ......+++++|+|+++++++...   .+|+.+++++|..
T Consensus       217 ~~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~  253 (321)
T 2pk3_A          217 LEAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIG  253 (321)
T ss_dssp             SSCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCE
T ss_pred             CCcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCC
Confidence            001234789999999999999654   4689999998864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.93  E-value=1.9e-25  Score=195.03  Aligned_cols=223  Identities=16%  Similarity=0.077  Sum_probs=164.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +.+....++.++.+|++|.+++.+++       +
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLEDDPRYTFVKGDVADYELVKELV-------R   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHH-------H
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhccCCceEEEEcCCCCHHHHHHHh-------h
Confidence            5679999999999999999999996  89999988642  12211 22222346888999999999888776       2


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------cC
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------GG  162 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~  162 (280)
                      ++|+|||+||....      +.+.+++++.+++|+.++.++++++.+.   ...++||++||.....           +.
T Consensus        75 ~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~  145 (336)
T 2hun_A           75 KVDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRL  145 (336)
T ss_dssp             TCSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCC
T ss_pred             CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCC
Confidence            89999999997531      2344567899999999999999999886   2237999999976432           23


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-------cCCC
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NMQG  235 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  235 (280)
                      .+...|+.+|++.+.+++.++.++   |++++.++|+.+.++......    ....   ..........       ....
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~  215 (336)
T 2hun_A          146 MPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEK----LIPK---TIIRASLGLKIPIYGTGKNVR  215 (336)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTS----HHHH---HHHHHHTTCCEEEETC---CE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCc----hHHH---HHHHHHcCCCceEeCCCCcee
Confidence            456789999999999999999884   799999999999998743210    0000   0111111100       0124


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       236 ~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .++.++|+|++++++++..   .+|+.+++++|..
T Consensus       216 ~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~  247 (336)
T 2hun_A          216 DWLYVEDHVRAIELVLLKG---ESREIYNISAGEE  247 (336)
T ss_dssp             EEEEHHHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             eeEEHHHHHHHHHHHHhCC---CCCCEEEeCCCCc
Confidence            5789999999999998643   3799999999864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.93  E-value=5.4e-25  Score=193.92  Aligned_cols=233  Identities=14%  Similarity=0.042  Sum_probs=171.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+......+.+....++.++.+|+++.+++.++++..     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            6789999999999999999999999999999999987655444444433356888999999999998888755     79


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc------------cCC
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI------------GGL  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~------------~~~  163 (280)
                      |+|||+||...      ...+.+++++.+++|+.++..+++++.+.   ...++||++||.....            +..
T Consensus        82 d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~  152 (357)
T 1rkx_A           82 EIVFHMAAQPL------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  152 (357)
T ss_dssp             SEEEECCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             CEEEECCCCcc------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence            99999998632      12345678899999999999999999763   2247999999976421            233


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHC------CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc-----
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELG------KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-----  232 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~------~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  232 (280)
                      +...|+.+|.+.+.+++.++.++.      ..|++++.++||.+.++.....   ......   ...........     
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~---~~~~~~---~~~~~~~g~~~~~~~~  226 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL---DRIVPD---ILRAFEQSQPVIIRNP  226 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS---SCHHHH---HHHHHHTTCCEECSCT
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc---ccHHHH---HHHHHhcCCCEEECCC
Confidence            567899999999999999999985      3489999999999999864211   000000   01111111100     


Q ss_pred             -CCCCCCCHHHHHHHHHHhcCCC--CCCeeecEEEeCCc
Q 023613          233 -MQGTELTANDVANAVLFLASDE--ARYISGTNLMVDGG  268 (280)
Q Consensus       233 -~~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i~~dgG  268 (280)
                       ....++.++|+|++++.++...  .....|+.+++.+|
T Consensus       227 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          227 HAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             TCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             CCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence             1135789999999999888521  11235788998764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.93  E-value=2.6e-25  Score=194.43  Aligned_cols=229  Identities=14%  Similarity=0.052  Sum_probs=167.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEE-ecCCCCHHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFC-HCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~-~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+..  ..++.++ .+|+++.+++.++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            46799999999999999999999999999999999987766554443311  1467777 799999887766554     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-cCC-------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGL-------  163 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~-------  163 (280)
                        ++|+|||+||....  .       +++++.+++|+.++.++++++.+.   .+.++||++||..+.. +.+       
T Consensus        83 --~~d~vih~A~~~~~--~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~  148 (342)
T 1y1p_A           83 --GAAGVAHIASVVSF--S-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             --TCSEEEECCCCCSC--C-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             --CCCEEEEeCCCCCC--C-------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCccc
Confidence              89999999997532  1       246789999999999999998762   3347999999987652 211       


Q ss_pred             -----------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhh
Q 023613          164 -----------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM  220 (280)
Q Consensus       164 -----------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~  220 (280)
                                             +...|+.+|++.+.+++.++.++.. +++++.++||.+.++......... ...   
T Consensus       149 ~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~-~~~---  223 (342)
T 1y1p_A          149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSG-STS---  223 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCC-HHH---
T ss_pred             CccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCc-cHH---
Confidence                                   2357999999999999999999876 899999999999999754322110 000   


Q ss_pred             hhHHHHHhh------hccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          221 VGFRNFVAR------NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       221 ~~~~~~~~~------~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      .........      .......+++++|+|++++.++..  ...+|+.+..+|+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~~  276 (342)
T 1y1p_A          224 GWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAGT  276 (342)
T ss_dssp             HHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCEE
T ss_pred             HHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCCC
Confidence            000111000      001224678999999999999864  34567766666654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=1.8e-26  Score=192.57  Aligned_cols=199  Identities=14%  Similarity=0.077  Sum_probs=149.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|++|||||+|+||++++++|+++|+  +|++++|+.+......     ...+.++.+|++|++++.++++      
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~------   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQ------   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGS------
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----cCCceEEecCcCCHHHHHHHhc------
Confidence            36789999999999999999999999999  9999999876543211     1256788999999888766554      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                       ++|+||||||....         ..++++.+++|+.++..+++++.+    .+.++||++||..+..  +....|+++|
T Consensus        84 -~~d~vi~~ag~~~~---------~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~iv~~SS~~~~~--~~~~~Y~~sK  147 (242)
T 2bka_A           84 -GHDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK--SSNFLYLQVK  147 (242)
T ss_dssp             -SCSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHH
T ss_pred             -CCCEEEECCCcccc---------cCCcccceeeeHHHHHHHHHHHHH----CCCCEEEEEccCcCCC--CCcchHHHHH
Confidence             89999999996421         245788999999999998887654    4457999999987764  3456899999


Q ss_pred             HHHHHHHHHHHHHHCCCCe-EEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc---CCCCCCCHHHHHHHHH
Q 023613          173 HAVLGLNKNVAAELGKYGI-RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN---MQGTELTANDVANAVL  248 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi-~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~~~~  248 (280)
                      ++++.+++.+       ++ ++++|+||.+.|++......  ..       .........+   ..+++++++|+|++++
T Consensus       148 ~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  211 (242)
T 2bka_A          148 GEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG--EW-------LVRKFFGSLPDSWASGHSVPVVTVVRAML  211 (242)
T ss_dssp             HHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH--HH-------HHHHHHCSCCTTGGGGTEEEHHHHHHHHH
T ss_pred             HHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH--HH-------HHHHhhcccCccccCCcccCHHHHHHHHH
Confidence            9999988653       45 79999999999997432110  00       0010011111   0256889999999999


Q ss_pred             HhcCCCCC
Q 023613          249 FLASDEAR  256 (280)
Q Consensus       249 ~L~s~~~~  256 (280)
                      +++++...
T Consensus       212 ~~~~~~~~  219 (242)
T 2bka_A          212 NNVVRPRD  219 (242)
T ss_dssp             HHHTSCCC
T ss_pred             HHHhCccc
Confidence            99987543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.93  E-value=2e-25  Score=196.88  Aligned_cols=226  Identities=15%  Similarity=0.118  Sum_probs=166.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCc--chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           20 VALITGGATGIGESTVRLFHKH-GAKVCIADVQD--NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++|||||+|+||++++++|++. |++|++++|+.  ...+.+ +.+....++.++.+|+++.+++.+++++.     ++|
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCC
Confidence            4899999999999999999998 79999999864  222222 22222346888999999999998887752     899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-----CceEEEEccccccc-----------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-----KGTIISICSVAGAI-----------  160 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~iv~isS~~~~~-----------  160 (280)
                      +|||+||....      +.+.+++++.+++|+.++.++++++.+.|...+     .++||++||.....           
T Consensus        76 ~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           76 AVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             EEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             EEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            99999997531      234566889999999999999999999864321     25999999965321           


Q ss_pred             ----------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh
Q 023613          161 ----------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       161 ----------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                                +.++...|+.+|++.+.+++.++.++   |++++.++|+.+.++......    ...   ..........
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~----~~~---~~~~~~~~~~  219 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEK----LIP---LVILNALEGK  219 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTS----HHH---HHHHHHHHTC
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCccc----HHH---HHHHHHHcCC
Confidence                      12345789999999999999999886   799999999999999753210    000   0011111111


Q ss_pred             c-------cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          231 A-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 ~-------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .       .....++.++|+|++++++++..   .+|+.+++++|..
T Consensus       220 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~  263 (361)
T 1kew_A          220 PLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNE  263 (361)
T ss_dssp             CEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCE
T ss_pred             CceEcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCe
Confidence            0       01135789999999999999653   4799999999864

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.93  E-value=6.6e-25  Score=191.52  Aligned_cols=221  Identities=18%  Similarity=0.073  Sum_probs=157.1

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +...++++|++|||||+|+||++++++|+++|++|++++|+.+...+..+.+   .++.++.+|++|.+++.++++++  
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l---~~v~~~~~Dl~d~~~~~~~~~~~--   87 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV---AGLSVIEGSVTDAGLLERAFDSF--   87 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC---TTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc---CCceEEEeeCCCHHHHHHHHhhc--
Confidence            3345688999999999999999999999999999999999754322111111   46788999999999998888765  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----C--
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----L--  163 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----~--  163 (280)
                         ++|+||||||....  .     +.++++  +++|+.++.++++++..    .+.++||++||.....+.     +  
T Consensus        88 ---~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~  151 (330)
T 2pzm_A           88 ---KPTHVVHSAAAYKD--P-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPID  151 (330)
T ss_dssp             ---CCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ---CCCEEEECCccCCC--c-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcC
Confidence               89999999997542  1     445666  99999999999999875    235799999998765433     2  


Q ss_pred             ----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccC----CC
Q 023613          164 ----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM----QG  235 (280)
Q Consensus       164 ----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  235 (280)
                          +...|+.+|++++.+++.+       ++....+.|+.+..+.....+.. ..       ..........+    ..
T Consensus       152 E~~~~~~~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~  216 (330)
T 2pzm_A          152 SPTAPFTSYGISKTAGEAFLMMS-------DVPVVSLRLANVTGPRLAIGPIP-TF-------YKRLKAGQKCFCSDTVR  216 (330)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHTC-------SSCEEEEEECEEECTTCCSSHHH-HH-------HHHHHTTCCCCEESCEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcCCCCCHHH-HH-------HHHHHcCCEEeCCCCEe
Confidence                5678999999999998876       34445555555544432000000 00       00000000000    25


Q ss_pred             CCCCHHHHHH-HHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          236 TELTANDVAN-AVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       236 ~~~~~~dva~-~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .+++++|+|+ +++++++...    |+.+++++|...
T Consensus       217 ~~i~~~Dva~~a~~~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          217 DFLDMSDFLAIADLSLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             CEEEHHHHHHHHHHHTSTTCC----CEEEEESCSCCE
T ss_pred             cceeHHHHHHHHHHHHhhcCC----CCEEEeCCCCCC
Confidence            6789999999 9999997632    899999998643

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.92  E-value=1.3e-24  Score=190.13  Aligned_cols=233  Identities=17%  Similarity=0.107  Sum_probs=161.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-HHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+....++.++.+|++|.+++.++++..     +
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            35789999999999999999999999999999999875432 12233332346888899999999998888765     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-----------ccCC
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-----------IGGL  163 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-----------~~~~  163 (280)
                      +|+||||||....      +.+.+++++.+++|+.++.++++++...   ...++||++||....           .+..
T Consensus        76 ~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           76 PDEVYNLAAQSFV------GVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             CSEEEECCCCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECCCCcch------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence            9999999997531      1234568899999999999999999853   113799999998542           2334


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHC---CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHH-HHHhhhccCCCCCCC
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELG---KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFR-NFVARNANMQGTELT  239 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~---~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  239 (280)
                      +...|+.+|++.+.+++.++.++.   ..++.++.+.||...|.+.... ..  .......... ............++.
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (345)
T 2z1m_A          147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKI-TY--SLARIKYGLQDKLVLGNLNAKRDWGY  223 (345)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH-HH--HHHHHHTTSCSCEEESCTTCEECCEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHH-HH--HHHHHHcCCCCeeeeCCCCceeeeEE
Confidence            567899999999999999999875   2345667777887766542110 00  0000000000 000000011134899


Q ss_pred             HHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          240 ANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++|+|++++++++...    ++.+++.+|.
T Consensus       224 v~Dva~a~~~~~~~~~----~~~~~i~~~~  249 (345)
T 2z1m_A          224 APEYVEAMWLMMQQPE----PDDYVIATGE  249 (345)
T ss_dssp             HHHHHHHHHHHHTSSS----CCCEEECCSC
T ss_pred             HHHHHHHHHHHHhCCC----CceEEEeCCC
Confidence            9999999999997543    3677776664

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.92  E-value=4.7e-25  Score=181.39  Aligned_cols=192  Identities=16%  Similarity=0.178  Sum_probs=155.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHcCCccEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      ++|||||+|+||++++++|+++|++|++++|+.+.....       ..+.++.+|++| ++++.++++       ++|+|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~-------~~d~v   67 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------NNVKAVHFDVDWTPEEMAKQLH-------GMDAI   67 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------TTEEEEECCTTSCHHHHHTTTT-------TCSEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------CCceEEEecccCCHHHHHHHHc-------CCCEE
Confidence            589999999999999999999999999999998654321       468899999999 888776654       79999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-------Cccchhh
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-------PHAYTGS  171 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~Y~~s  171 (280)
                      |||||....              +.+++|+.+...+++++..    .+.++||++||..+..+.+.       ...|+.+
T Consensus        68 i~~ag~~~~--------------~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s  129 (219)
T 3dqp_A           68 INVSGSGGK--------------SLLKVDLYGAVKLMQAAEK----AEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA  129 (219)
T ss_dssp             EECCCCTTS--------------SCCCCCCHHHHHHHHHHHH----TTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred             EECCcCCCC--------------CcEeEeHHHHHHHHHHHHH----hCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence            999997632              2788999999998888754    44579999999888776665       7799999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |++.+.+++      ...|++++.++||.+.++.........                  .....+++++|+|+++++++
T Consensus       130 K~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~~------------------~~~~~~i~~~Dva~~i~~~l  185 (219)
T 3dqp_A          130 KHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDIN------------------DEVSASNTIGDVADTIKELV  185 (219)
T ss_dssp             HHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEES------------------SSCCCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHH------hccCCcEEEEeCceEecCCCCCccccC------------------CCcCCcccHHHHHHHHHHHH
Confidence            999999886      357899999999999987543322110                  12267899999999999999


Q ss_pred             CCCCCCeeecEEEeCCcc
Q 023613          252 SDEARYISGTNLMVDGGF  269 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~  269 (280)
                      ...  ...|+.+++++|.
T Consensus       186 ~~~--~~~g~~~~i~~g~  201 (219)
T 3dqp_A          186 MTD--HSIGKVISMHNGK  201 (219)
T ss_dssp             TCG--GGTTEEEEEEECS
T ss_pred             hCc--cccCcEEEeCCCC
Confidence            764  3459999998875

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.92  E-value=1e-24  Score=191.90  Aligned_cols=232  Identities=14%  Similarity=0.030  Sum_probs=169.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc----hHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN----LGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++|++|||||+|+||++++++|+++|++|++++|+..    .+..+.+.+..  ...+.++.+|+++.+++.++++  
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence            467899999999999999999999999999999999753    23333333221  1467889999999988877665  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----  163 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----  163 (280)
                           ++|+|||+||....  .    .+.+++++.+++|+.++..+++++.+.    +.++||++||.....+.+     
T Consensus       102 -----~~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~  166 (352)
T 1sb8_A          102 -----GVDYVLHQAALGSV--P----RSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPKV  166 (352)
T ss_dssp             -----TCSEEEECCSCCCH--H----HHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             -----CCCEEEECCcccCc--h----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHhcCCCCCCCCC
Confidence                 89999999997532  1    244678899999999999999998763    447999999987654332     


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc-----
Q 023613          164 ------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-----  232 (280)
Q Consensus       164 ------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  232 (280)
                            +...|+.+|++.+.+++.++.++   |++++.+.||.+.++.............   ............     
T Consensus       167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~  240 (352)
T 1sb8_A          167 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIP---KWTSSMIQGDDVYINGD  240 (352)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHH---HHHHHHHHTCCCEEESS
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHH---HHHHHHHCCCCcEEeCC
Confidence                  35789999999999999998885   7999999999999987543210000000   001111111110     


Q ss_pred             --CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 --MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 --~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                        ....++.++|+|++++.++... ....|+.+++++|..
T Consensus       241 g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~  279 (352)
T 1sb8_A          241 GETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGR  279 (352)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCC
T ss_pred             CCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCC
Confidence              1125889999999999888642 245789999998854

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.92  E-value=1.3e-24  Score=181.94  Aligned_cols=217  Identities=11%  Similarity=0.005  Sum_probs=157.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +++|++|||||+|+||++++++|+++  |++|++++|+.+..+.+    .  ..+.++.+|++|.+++.++++       
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~-------   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----G--GEADVFIGDITDADSINPAFQ-------   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----T--CCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc----C--CCeeEEEecCCCHHHHHHHHc-------
Confidence            35789999999999999999999999  89999999987655432    2  356688999999998887765       


Q ss_pred             CccEEEECCCCCCCCCC-------CCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           94 TLDIMVNNAGISGAPCP-------DIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      ++|+||||||.......       ...+...+++++.+++|+.+...+++++.+.    +.++||++||..+..+.++..
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~  144 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLN  144 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGG
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCCCCCccc
Confidence            69999999997642100       0112233455678899999999999887653    347999999988765544433


Q ss_pred             c-----chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHH
Q 023613          167 A-----YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN  241 (280)
Q Consensus       167 ~-----Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (280)
                      .     |+.+|++++.+++.       .|++++.++||.+.++............       .... .   ...++++++
T Consensus       145 ~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~-------~~~~-~---~~~~~~~~~  206 (253)
T 1xq6_A          145 KLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKD-------DELL-Q---TDTKTVPRA  206 (253)
T ss_dssp             GGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEEST-------TGGG-G---SSCCEEEHH
T ss_pred             cccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCC-------cCCc-C---CCCcEEcHH
Confidence            3     55689999887753       6899999999999998643210000000       0000 0   114578999


Q ss_pred             HHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          242 DVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       242 dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      |+|+++++++...  ...|+.+++++|.
T Consensus       207 Dva~~~~~~~~~~--~~~g~~~~i~~~~  232 (253)
T 1xq6_A          207 DVAEVCIQALLFE--EAKNKAFDLGSKP  232 (253)
T ss_dssp             HHHHHHHHHTTCG--GGTTEEEEEEECC
T ss_pred             HHHHHHHHHHcCc--cccCCEEEecCCC
Confidence            9999999999753  3478999999864

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=1.9e-24  Score=179.92  Aligned_cols=198  Identities=15%  Similarity=0.076  Sum_probs=138.8

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +..|++|||||+|+||++++++|+++| ++|++++|+++.+...    . ...+.++.+|++|+++++++++       +
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~----~-~~~~~~~~~Dl~d~~~~~~~~~-------~   88 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP----Y-PTNSQIIMGDVLNHAALKQAMQ-------G   88 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS----C-CTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc----c-cCCcEEEEecCCCHHHHHHHhc-------C
Confidence            346899999999999999999999999 8999999998754321    1 2468889999999999887766       7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCcc-------
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-------  167 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~-------  167 (280)
                      +|+||||+|...             +.           ..++.+++.+++.+.++||++||..+..+.+....       
T Consensus        89 ~D~vv~~a~~~~-------------~~-----------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~  144 (236)
T 3qvo_A           89 QDIVYANLTGED-------------LD-----------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVI  144 (236)
T ss_dssp             CSEEEEECCSTT-------------HH-----------HHHHHHHHHHHHTTCCEEEEECCCCC----------------
T ss_pred             CCEEEEcCCCCc-------------hh-----------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcc
Confidence            899999998521             11           22456777777777789999999887655443211       


Q ss_pred             --chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          168 --YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       168 --Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                        +...+...       ...+...|++++.|+||++.++........               .......+++++++|+|+
T Consensus       145 ~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~---------------~~~~~~~~~~i~~~DvA~  202 (236)
T 3qvo_A          145 GEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELT---------------SRNEPFKGTIVSRKSVAA  202 (236)
T ss_dssp             CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEE---------------CTTSCCSCSEEEHHHHHH
T ss_pred             cchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEe---------------ccCCCCCCcEECHHHHHH
Confidence              11222221       223346799999999999998754321100               011122367899999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++++++...++ |+.+.++++.+..
T Consensus       203 ~i~~ll~~~~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          203 LITDIIDKPEKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             HHHHHHHSTTTTT-TEEEEEECSSCCC
T ss_pred             HHHHHHcCccccc-CeeEEecCCCCCC
Confidence            9999999876565 8999998887654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.92  E-value=4.5e-24  Score=187.18  Aligned_cols=229  Identities=14%  Similarity=0.072  Sum_probs=160.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+++|++|||||+|+||++++++|+++|  ++|++.+|... ......+.+.....+.++.+|++|.+++.++++..  
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER--   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc--
Confidence            34678999999999999999999999999  66777777541 11111122222357889999999999998888753  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-------
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-------  163 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-------  163 (280)
                         ++|+|||+|+....      ....+++++.+++|+.++..+++++...    +.+++|++||.......+       
T Consensus        98 ---~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy~~~~~~~~~~E  164 (346)
T 4egb_A           98 ---DVQVIVNFAAESHV------DRSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVYGSLGKTGRFTE  164 (346)
T ss_dssp             ---TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGGCCCCSSCCBCT
T ss_pred             ---CCCEEEECCcccch------hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHhCCCCcCCCcCC
Confidence               79999999997643      1245667889999999999999988763    447899999976543321       


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-------
Q 023613          164 -----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------  231 (280)
Q Consensus       164 -----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  231 (280)
                           +...|+.+|.+.+.+++.++.++   |+++..+.|+.+.++...........       .........       
T Consensus       165 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  234 (346)
T 4egb_A          165 ETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLM-------VTNALEGKKLPLYGDG  234 (346)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHH-------HHHHHTTCCCEEETTS
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHH-------HHHHHcCCCceeeCCC
Confidence                 24789999999999999998884   78999999999998864321100000       111111110       


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .....++.++|+|++++.++....   .|+++++.+|..
T Consensus       235 ~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~  270 (346)
T 4egb_A          235 LNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNE  270 (346)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCC
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCc
Confidence            011245789999999999997543   789999999864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.91  E-value=1.3e-23  Score=183.85  Aligned_cols=211  Identities=12%  Similarity=0.067  Sum_probs=153.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +++|||||+|+||++++++|+++|++|++++|+....+.+.+     ..+.++.+|++|.+++.++++       ++|+|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   81 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-----LEPECRVAEMLDHAGLERALR-------GLDGV   81 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-----GCCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-----CCeEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            379999999999999999999999999999998765433211     257788999999988776664       79999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC--------------
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--------------  164 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~--------------  164 (280)
                      ||+||...        .+.+++++.+++|+.++.++++++.+.    +.++||++||.....+.+.              
T Consensus        82 ih~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           82 IFSAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             EEC--------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             EECCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            99999642        234567889999999999999999874    3479999999877654433              


Q ss_pred             --CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecccc-ccCCCchhhhhhhhhhHHHHHhhhcc----CCCCC
Q 023613          165 --PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA-LAHLPEEERTEDAMVGFRNFVARNAN----MQGTE  237 (280)
Q Consensus       165 --~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  237 (280)
                        ...|+.+|.+.+.+++.++.   . |++++.+.||.+.++.. ....+.  .       ..........    ....+
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~  216 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGR--V-------ITAIGNGEMTHYVAGQRNV  216 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTH--H-------HHHHHTTCCCEEECCEEEE
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHH--H-------HHHHHcCCCccccCCCcce
Confidence              67899999999999999876   3 79999999999999875 211110  0       1111111110    11237


Q ss_pred             CCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          238 LTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       238 ~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++++|+|+++++++....   .|+.+++++|.
T Consensus       217 i~v~Dva~~~~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          217 IDAAEAGRGLLMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             EEHHHHHHHHHHHHHHSC---TTCEEEECCEE
T ss_pred             eeHHHHHHHHHHHHhCCC---CCceEEEcCCc
Confidence            899999999999997543   28999999986

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.91  E-value=4.1e-24  Score=187.50  Aligned_cols=220  Identities=14%  Similarity=0.090  Sum_probs=161.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcch-HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           19 RVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNL-GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~--g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      |++|||||+|+||++++++|+++  |++|++++|+... .....+.+. ..++.++.+|++|++++.++++       ++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-------~~   76 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAA-------KA   76 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc-cCCeEEEECCCCCHHHHHHHhh-------cC
Confidence            68999999999999999999999  8999999986421 111112222 2468889999999988877665       67


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc---------------
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---------------  160 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------------  160 (280)
                      |+|||+||....      +.+.+++++.+++|+.++.++++++.+.    + .+||++||.....               
T Consensus        77 d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~  145 (348)
T 1oc2_A           77 DAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP  145 (348)
T ss_dssp             SEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             CEEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence            999999997531      2234567889999999999999999875    2 4999999976431               


Q ss_pred             --------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-
Q 023613          161 --------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-  231 (280)
Q Consensus       161 --------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  231 (280)
                              +..+...|+.+|++.+.+++.++.++   |++++.++|+.+.++......    ...   ........... 
T Consensus       146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~----~~~---~~~~~~~~~~~~  215 (348)
T 1oc2_A          146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEK----FIP---RQITNILAGIKP  215 (348)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTS----HHH---HHHHHHHHTCCC
T ss_pred             CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccc----hHH---HHHHHHHcCCCc
Confidence                    22345789999999999999998886   799999999999998753210    000   00111111110 


Q ss_pred             ------cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 ------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                            .....+++++|+|+++++++...   .+|+.+++++|..
T Consensus       216 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~  257 (348)
T 1oc2_A          216 KLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGE  257 (348)
T ss_dssp             EEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             eEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCC
Confidence                  11235789999999999998643   3789999999864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.91  E-value=2e-23  Score=169.51  Aligned_cols=198  Identities=13%  Similarity=0.079  Sum_probs=148.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|+++||||+|+||++++++|+++|++|++++|+.+....    . ...++.++.+|++|++++.++++       ++|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   70 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS----E-GPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS----S-SCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc----c-cCCceEEEEecCCCHHHHHHHHc-------CCCE
Confidence            4789999999999999999999999999999998765321    1 12467889999999988877665       6899


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC----CCccchhhHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----GPHAYTGSKH  173 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----~~~~Y~~sK~  173 (280)
                      +||++|....     .+  +      .++|+.+...+++++...    +.+++|++||.......+    +...|+.+|.
T Consensus        71 vi~~a~~~~~-----~~--~------~~~n~~~~~~~~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~  133 (206)
T 1hdo_A           71 VIVLLGTRND-----LS--P------TTVMSEGARNIVAAMKAH----GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (206)
T ss_dssp             EEECCCCTTC-----CS--C------CCHHHHHHHHHHHHHHHH----TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             EEECccCCCC-----CC--c------cchHHHHHHHHHHHHHHh----CCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence            9999997532     11  1      247888888888877653    346999999987655444    4578999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCee-eccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAV-ATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++.+++.       .|++++.+.||.+ .++.... +...         .     ...+. +.+++++|+|+++++++.
T Consensus       134 ~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~-~~~~---------~-----~~~~~-~~~i~~~Dva~~~~~~~~  190 (206)
T 1hdo_A          134 RMHKVLRE-------SGLKYVAVMPPHIGDQPLTGA-YTVT---------L-----DGRGP-SRVISKHDLGHFMLRCLT  190 (206)
T ss_dssp             HHHHHHHH-------TCSEEEEECCSEEECCCCCSC-CEEE---------S-----SSCSS-CSEEEHHHHHHHHHHTTS
T ss_pred             HHHHHHHh-------CCCCEEEEeCCcccCCCCCcc-eEec---------c-----cCCCC-CCccCHHHHHHHHHHHhc
Confidence            99998742       5799999999998 3332211 1000         0     00111 578899999999999997


Q ss_pred             CCCCCeeecEEEeCCcc
Q 023613          253 DEARYISGTNLMVDGGF  269 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~  269 (280)
                      ..  ..+|+.+.++||+
T Consensus       191 ~~--~~~g~~~~i~~g~  205 (206)
T 1hdo_A          191 TD--EYDGHSTYPSHQY  205 (206)
T ss_dssp             CS--TTTTCEEEEECCC
T ss_pred             Cc--cccccceeeeccc
Confidence            64  3689999999985

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.91  E-value=9.9e-24  Score=185.32  Aligned_cols=232  Identities=12%  Similarity=-0.003  Sum_probs=169.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC------CCeEEEecCCCCHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE------PDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .+++|++|||||+|+||++++++|+++|++|++++|+........+.+...      .++.++.+|++|.+++.++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            467999999999999999999999999999999999765433332222111      478899999999988877665  


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----  163 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----  163 (280)
                           ++|+|||+||....      ..+.+++.+.+++|+.+..++++++...    +-+++|++||.......+     
T Consensus       100 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~  164 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSV------PRSIVDPITTNATNITGFLNILHAAKNA----QVQSFTYAASSSTYGDHPALPKV  164 (351)
T ss_dssp             -----TCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             -----CCCEEEECCccCCc------chhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEecHHhcCCCCCCCCc
Confidence                 89999999996432      2345667889999999999999988653    346999999987653322     


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc-----
Q 023613          164 ------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-----  232 (280)
Q Consensus       164 ------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  232 (280)
                            +...|+.+|.+.+.+++.++.++   |+++..+.|+.+.++.............   ............     
T Consensus       165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~  238 (351)
T 3ruf_A          165 EENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIP---KWTAAMLKGDDVYINGD  238 (351)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHH---HHHHHHHHTCCCEEESS
T ss_pred             cCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHH---HHHHHHHcCCCcEEeCC
Confidence                  24689999999999999998885   7899999999999886443211100000   001111111110     


Q ss_pred             --CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 --MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 --~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                        ....++.++|+|++++.++... ....|+.+++.+|..
T Consensus       239 g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~  277 (351)
T 3ruf_A          239 GETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDR  277 (351)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCC
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCc
Confidence              1135788999999999988642 356789999988764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.91  E-value=1.3e-23  Score=184.36  Aligned_cols=225  Identities=10%  Similarity=0.025  Sum_probs=157.2

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+.++++|++|||||+|+||+++++.|+++|++|++++|+.+.           ..+.++.+|+++.+++.++++    
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~----   76 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIM----   76 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHT----
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHh----
Confidence            34567889999999999999999999999999999999998764           356788999999998877665    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc---------
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG---------  161 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------  161 (280)
                         ++|+|||+|+....        +.+++++.+++|+.++..+++++..    .+.++||++||......         
T Consensus        77 ---~~d~vih~A~~~~~--------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~~  141 (347)
T 4id9_A           77 ---GVSAVLHLGAFMSW--------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPVT  141 (347)
T ss_dssp             ---TCSEEEECCCCCCS--------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSBC
T ss_pred             ---CCCEEEECCcccCc--------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCcC
Confidence               89999999987532        3455699999999999999998865    34579999999654322         


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeee-------------ccccccCCCch---hhhhhhhh
Q 023613          162 ----GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVA-------------TGLALAHLPEE---ERTEDAMV  221 (280)
Q Consensus       162 ----~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~-------------T~~~~~~~~~~---~~~~~~~~  221 (280)
                          ..+...|+.+|.+.+.+++.++.+   .|+++..+.|+.+.             .+.........   ........
T Consensus       142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~  218 (347)
T 4id9_A          142 EDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIA  218 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHH
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHH
Confidence                234578999999999999999887   47999999999998             33211000000   00000001


Q ss_pred             hHHHHHhhhcc--------CCCCC----CCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          222 GFRNFVARNAN--------MQGTE----LTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       222 ~~~~~~~~~~~--------~~~~~----~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .+.........        ....+    +.++|+|++++.++....  ..|+.+++.+|..
T Consensus       219 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~  277 (347)
T 4id9_A          219 ELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEP  277 (347)
T ss_dssp             HHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSC
T ss_pred             HHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCc
Confidence            11111111110        11245    889999999999996542  4589999988864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.91  E-value=2.6e-23  Score=181.71  Aligned_cols=224  Identities=17%  Similarity=0.121  Sum_probs=153.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH--hCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS--LGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+...+....  +.. ..++.++.+|++|.+++.++++      
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            4689999999999999999999999999999989987644332221  111 1257788999999988776654      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC---------
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL---------  163 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~---------  163 (280)
                       ++|+|||+|+...     ...  .+..++.+++|+.++.++++++.+..   ..++||++||..+..+.+         
T Consensus        77 -~~d~Vih~A~~~~-----~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           77 -GCTGVFHVATPMD-----FES--KDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             -TCSEEEECCCCCC-----SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             -CCCEEEEeccccC-----CCC--CChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcc
Confidence             7899999998541     111  12345789999999999999988753   147999999987544211         


Q ss_pred             -------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhh-hhhhhHHHHHhh
Q 023613          164 -------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFVAR  229 (280)
Q Consensus       164 -------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~-~~~~~~~~~~~~  229 (280)
                                   ....|+.+|.+.+.+++.++.+   +|++++.++|+.+.++......+...... .......... .
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~-~  221 (337)
T 2c29_D          146 CWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHY-S  221 (337)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGH-H
T ss_pred             cCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccc-c
Confidence                         2236999999999998887765   47999999999999997544332210000 0000000000 0


Q ss_pred             hccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEE
Q 023613          230 NANMQGTELTANDVANAVLFLASDEARYISGTNL  263 (280)
Q Consensus       230 ~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i  263 (280)
                      . ....+++.++|+|+++++++...  ...|..+
T Consensus       222 ~-~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~  252 (337)
T 2c29_D          222 I-IRQGQFVHLDDLCNAHIYLFENP--KAEGRYI  252 (337)
T ss_dssp             H-HTEEEEEEHHHHHHHHHHHHHCT--TCCEEEE
T ss_pred             c-cCCCCEEEHHHHHHHHHHHhcCc--ccCceEE
Confidence            0 01245899999999999998643  3456543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.91  E-value=1.8e-23  Score=180.79  Aligned_cols=219  Identities=16%  Similarity=0.087  Sum_probs=158.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|+||++++++|+++|++|++++|......   +.+.  ..+.++.+|+++++++.++++..     ++|++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~--~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi   71 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVP--KGVPFFRVDLRDKEGVERAFREF-----RPTHVS   71 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGSC--TTCCEECCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhcc--cCeEEEECCCCCHHHHHHHHHhc-----CCCEEE
Confidence            6899999999999999999999999999988543211   1111  24667899999999988877642     799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-------------CCCc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-------------LGPH  166 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-------------~~~~  166 (280)
                      |+|+....      ..+.+++++.+++|+.++.++++++..    .+.++||++||..+.++.             .+..
T Consensus        72 ~~a~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           72 HQAAQASV------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             ECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             ECccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            99986431      134567889999999999999998864    334799999998222211             2456


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh------------ccCC
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN------------ANMQ  234 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~  234 (280)
                      .|+.+|++.+.+++.++.++   |++++.+.|+.+.++......... ...   ..........            ....
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~  214 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAG-VVA---IFAERVLKGLPVTLYARKTPGDEGCV  214 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTH-HHH---HHHHHHHHTCCEEEECSSSTTSCCCE
T ss_pred             hHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCc-HHH---HHHHHHHcCCCcEEEecccCCCCCeE
Confidence            89999999999999998885   799999999999998753321100 000   0011111110            0012


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       235 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ..++.++|+|+++++++...     |+.+++++|..
T Consensus       215 ~~~i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~  245 (311)
T 2p5y_A          215 RDYVYVGDVAEAHALALFSL-----EGIYNVGTGEG  245 (311)
T ss_dssp             ECEEEHHHHHHHHHHHHHHC-----CEEEEESCSCC
T ss_pred             EeeEEHHHHHHHHHHHHhCC-----CCEEEeCCCCC
Confidence            35788999999999998642     88999998864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.91  E-value=9.3e-24  Score=187.53  Aligned_cols=229  Identities=14%  Similarity=0.093  Sum_probs=161.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..++++++|||||+|+||++++++|+++| ++|++++|+.+...   +.+.....+.++.+|+++++++.++++      
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~l~~~~~v~~~~~Dl~d~~~l~~~~~------   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK---INVPDHPAVRFSETSITDDALLASLQD------   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG---GGSCCCTTEEEECSCTTCHHHHHHCCS------
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch---hhccCCCceEEEECCCCCHHHHHHHhh------
Confidence            45789999999999999999999999999 99999999765422   112123468889999999987765544      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccc-----------
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAI-----------  160 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~-----------  160 (280)
                       ++|+|||+||....      ..+.+++++.+++|+.++..+++++..    . +.++||++||.....           
T Consensus        99 -~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~~~~E  167 (377)
T 2q1s_A           99 -EYDYVFHLATYHGN------QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDAKATE  167 (377)
T ss_dssp             -CCSEEEECCCCSCH------HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--------------C
T ss_pred             -CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCcCccc
Confidence             89999999996532      123456889999999999999988743    3 446999999975321           


Q ss_pred             -----cC-CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccC------CCchhhhhhhhhhHHHHHh
Q 023613          161 -----GG-LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH------LPEEERTEDAMVGFRNFVA  228 (280)
Q Consensus       161 -----~~-~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~------~~~~~~~~~~~~~~~~~~~  228 (280)
                           +. .+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.....      .+.... ......+.....
T Consensus       168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~  243 (377)
T 2q1s_A          168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVW-RNVTPTFIYKAL  243 (377)
T ss_dssp             CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTS-CSHHHHHHHHHH
T ss_pred             ccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCccccc-ccHHHHHHHHHH
Confidence                 22 345789999999999999998875   79999999999999865100      000000 000000111111


Q ss_pred             hhcc--------CCCCCCCHHHHHHH-HHHhcCCCCCCeeecEEEeCCccc
Q 023613          229 RNAN--------MQGTELTANDVANA-VLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       229 ~~~~--------~~~~~~~~~dva~~-~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ....        ....++.++|+|++ ++.++....   +| .+++.+|..
T Consensus       244 ~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~  290 (377)
T 2q1s_A          244 KGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKE  290 (377)
T ss_dssp             TTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCC
T ss_pred             cCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCc
Confidence            1111        11357889999999 999987543   68 999998753

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.91  E-value=4.1e-23  Score=180.34  Aligned_cols=215  Identities=15%  Similarity=0.054  Sum_probs=154.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.....+   .+....++.++.+|++|.+++.++++.     ++
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   89 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKDHPNLTFVEGSIADHALVNQLIGD-----LQ   89 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCCCTTEEEEECCTTCHHHHHHHHHH-----HC
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhhcCCceEEEEeCCCHHHHHHHHhc-----cC
Confidence            4678999999999999999999999999999999997543211   111114678899999999998888774     27


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc----cC--------
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI----GG--------  162 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~----~~--------  162 (280)
                      +|+|||+||....  .     +.++++  +++|+.++..+++++.+    .+.++||++||.....    ..        
T Consensus        90 ~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~  156 (333)
T 2q1w_A           90 PDAVVHTAASYKD--P-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPR  156 (333)
T ss_dssp             CSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCC
T ss_pred             CcEEEECceecCC--C-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCC
Confidence            9999999997642  1     334555  99999999999999877    3457999999977643    21        


Q ss_pred             CCC-ccchhhHHHHHHHHHH-HHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh----ccCCCC
Q 023613          163 LGP-HAYTGSKHAVLGLNKN-VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN----ANMQGT  236 (280)
Q Consensus       163 ~~~-~~Y~~sK~al~~~~~~-la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  236 (280)
                      .+. ..|+.+|++.+.+++. ++        ++..+.|+.+..+....... ...       ........    ......
T Consensus       157 ~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~  220 (333)
T 2q1w_A          157 NPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPL-PIF-------FQRLSEGKKCFVTKARRD  220 (333)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHH-HHH-------HHHHHTTCCCEEEECEEC
T ss_pred             CCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHH-HHH-------HHHHHcCCeeeCCCceEe
Confidence            233 7899999999999887 54        56778888887765110000 000       01111110    112256


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          237 ELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       237 ~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++.++|+|++++++++...    |+.+++++|..
T Consensus       221 ~i~v~Dva~ai~~~~~~~~----g~~~~v~~~~~  250 (333)
T 2q1w_A          221 FVFVKDLARATVRAVDGVG----HGAYHFSSGTD  250 (333)
T ss_dssp             EEEHHHHHHHHHHHHTTCC----CEEEECSCSCC
T ss_pred             eEEHHHHHHHHHHHHhcCC----CCEEEeCCCCC
Confidence            7899999999999997543    89999998864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.90  E-value=9.5e-24  Score=186.39  Aligned_cols=225  Identities=16%  Similarity=0.052  Sum_probs=156.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHH--cCCeEEEEecCcchHHHH---------HHHhCCCCCeEEEecCCCCHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHK--HGAKVCIADVQDNLGQQV---------CQSLGGEPDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~--~g~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~~~~D~~~~~~~~   82 (280)
                      +++++|++|||||+|+||++++++|++  .|++|++++|+.......         .... ....+.++.+|+++.++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL-IGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG-TTCCSEEEECCTTCHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc-cccCceEEECCCCCHHHHH
Confidence            467899999999999999999999999  999999999965421100         0011 1235688999999999887


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC
Q 023613           83 SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG  162 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  162 (280)
                      ++      ...++|+|||+||...        .+.+++++.+++|+.++.++++++...     +.+||++||.......
T Consensus        85 ~~------~~~~~D~vih~A~~~~--------~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~~V~~SS~~vyg~~  145 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSD--------TTMLNQELVMKTNYQAFLNLLEIARSK-----KAKVIYASSAGVYGNT  145 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCG--------GGCCCHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEEEEGGGGCSC
T ss_pred             Hh------hccCCCEEEECCccCC--------ccccCHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEeCcHHHhCCC
Confidence            76      2358999999999642        134568899999999999999998542     3469999995543221


Q ss_pred             ----------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-
Q 023613          163 ----------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-  231 (280)
Q Consensus       163 ----------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  231 (280)
                                .+...|+.+|.+.+.+++.++.+     +++..+.|+.+..+.............   ........... 
T Consensus       146 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~---~~~~~~~~~~~~  217 (362)
T 3sxp_A          146 KAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVL---QLALGAMAFKEV  217 (362)
T ss_dssp             CSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHH---HHHHHHHTTSEE
T ss_pred             CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHH---HHHHHHHhCCCe
Confidence                      12346999999999999887655     678888898888775432210000000   00111111110 


Q ss_pred             ------cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 ------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                            .....++.++|+|+++++++....   +| .+++++|..
T Consensus       218 ~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~  258 (362)
T 3sxp_A          218 KLFEFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQA  258 (362)
T ss_dssp             ECSGGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCE
T ss_pred             EEECCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCC
Confidence                  011357889999999999997643   68 999988764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.90  E-value=1.8e-23  Score=188.71  Aligned_cols=227  Identities=13%  Similarity=0.073  Sum_probs=158.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc---hHHHHHHHhC----------CCCCeEEEecCCCCHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN---LGQQVCQSLG----------GEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~---~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~   81 (280)
                      ...+|++|||||+|+||++++++|++.|++|+++.|+.+   ..+.+.+.+.          ...++.++.+|+++++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            356789999999999999999999999999999999876   2222222211          125788999999998877


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc--c
Q 023613           82 CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--A  159 (280)
Q Consensus        82 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~--~  159 (280)
                      .        ..+++|+||||||....         .+++++.+++|+.+...+++++.+     ...++|++||..+  .
T Consensus       146 ~--------~~~~~d~Vih~A~~~~~---------~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~  203 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTY  203 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSE
T ss_pred             C--------CcCCCCEEEECCcccCC---------CCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCC
Confidence            6        45799999999997532         246788999999999999999877     2479999999887  0


Q ss_pred             ----------------ccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhH
Q 023613          160 ----------------IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF  223 (280)
Q Consensus       160 ----------------~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~  223 (280)
                                      .+......|+.+|.+.+.+++.++.    .|++++.+.||.+.++.....+.............
T Consensus       204 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~  279 (427)
T 4f6c_A          204 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVM  279 (427)
T ss_dssp             ECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHH
T ss_pred             ccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHH
Confidence                            0122568999999999999988753    58999999999999987554322110000000001


Q ss_pred             HHHHhhhc------cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          224 RNFVARNA------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       224 ~~~~~~~~------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ........      .....++.++|+|+++++++....   .|+++++++|..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~  329 (427)
T 4f6c_A          280 NDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNK  329 (427)
T ss_dssp             HHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCC
T ss_pred             HHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCC
Confidence            11111100      112458899999999999997644   899999998764

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.90  E-value=1.9e-23  Score=180.80  Aligned_cols=214  Identities=12%  Similarity=0.064  Sum_probs=156.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||+|+||++++++|+++|+.|++..|+....+.    +  ...+.++.+|+++ +++.++++       ++|+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~----~--~~~~~~~~~Dl~~-~~~~~~~~-------~~d~v   67 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF----V--NEAARLVKADLAA-DDIKDYLK-------GAEEV   67 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG----S--CTTEEEECCCTTT-SCCHHHHT-------TCSEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh----c--CCCcEEEECcCCh-HHHHHHhc-------CCCEE
Confidence            579999999999999999999999555555554433221    1  2467889999998 77766654       89999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------cCCCCcc
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------GGLGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~~~~~~  167 (280)
                      ||+|+...      ...+.+++++.+++|+.++.++++++..    .+.++||++||.....           +..+...
T Consensus        68 ih~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~  137 (313)
T 3ehe_A           68 WHIAANPD------VRIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL  137 (313)
T ss_dssp             EECCCCCC------CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EECCCCCC------hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence            99998542      2345567899999999999999998655    3457999999977642           3345678


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc--------cCCCCCCC
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------NMQGTELT  239 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  239 (280)
                      |+.+|.+.+.+++.++.++   |+++..+.|+.+.++........        ...........        .....++.
T Consensus       138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~i~  206 (313)
T 3ehe_A          138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIY--------DFIMKLKRNPEELEILGNGEQNKSYIY  206 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHH--------HHHHHHHHCTTEEEESTTSCCEECCEE
T ss_pred             HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHH--------HHHHHHHcCCCceEEeCCCCeEEeEEE
Confidence            9999999999999999885   79999999999998864321000        00111111100        01135789


Q ss_pred             HHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          240 ANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+|+++++++.+   ...|+.+++.+|..
T Consensus       207 v~Dva~a~~~~~~~---~~~~~~~ni~~~~~  234 (313)
T 3ehe_A          207 ISDCVDAMLFGLRG---DERVNIFNIGSEDQ  234 (313)
T ss_dssp             HHHHHHHHHHHTTC---CSSEEEEECCCSCC
T ss_pred             HHHHHHHHHHHhcc---CCCCceEEECCCCC
Confidence            99999999999973   34689999998854

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.90  E-value=2.2e-23  Score=182.07  Aligned_cols=220  Identities=15%  Similarity=0.152  Sum_probs=160.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc---C---CeEEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKH---G---AKVCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~---g---~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++|||||+|+||++++++|+++   |   ++|++++|+..  ..+.+ +.+....++.++.+|++|.+++.+++      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcccCCCeEEEEcCCCCHHHHHHHh------
Confidence            5899999999999999999997   8   89999998642  11111 22222346888999999998877665      


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------  160 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------  160 (280)
                       +++|+|||+||....      +.+.+++++.+++|+.++.++++++.+.    +.++||++||.....           
T Consensus        75 -~~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 -RGVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             -TTCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             -cCCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCC
Confidence             489999999996531      1234567889999999999999999875    246999999976432           


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-c------C
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-N------M  233 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~  233 (280)
                      +..+...|+.+|++.+.+++.++.++   |++++.++|+.+.++......    ...   ........... .      .
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~  213 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEK----LIP---LFVTNLLDGGTLPLYGDGAN  213 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTS----HHH---HHHHHHHTTCCEEEETTSCC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCC----hHH---HHHHHHhcCCCcEEeCCCCe
Confidence            22346789999999999999998875   689999999999998743210    000   00111111110 0      1


Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          234 QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ...++.++|+|++++.++...   .+|+.+++++|..
T Consensus       214 ~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~  247 (337)
T 1r6d_A          214 VREWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLE  247 (337)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCE
T ss_pred             eEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCC
Confidence            135788999999999998643   3689999999864

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.90  E-value=4.4e-24  Score=184.53  Aligned_cols=217  Identities=17%  Similarity=0.058  Sum_probs=160.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||+|+||++++++|+++|++|++++|+.+......     ...+.++.+|+++.+ +.++++       . |+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~-~~~~~~-------~-d~v   66 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYS-WGAGIK-------G-DVV   66 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTT-TTTTCC-------C-SEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----CCCceEEECccccHH-HHhhcC-------C-CEE
Confidence            47999999999999999999999999999999765433211     246788999999986 544332       3 999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCcc
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~  167 (280)
                      ||+|+....      ..+.++++..+++|+.++.++++++...    +.++||++||......           ..+...
T Consensus        67 ih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           67 FHFAANPEV------RLSTTEPIVHFNENVVATFNVLEWARQT----GVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             EECCSSCSS------SGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EECCCCCCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence            999996422      3455678899999999999999988653    3469999999775422           234678


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc--------CCCCCCC
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN--------MQGTELT  239 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  239 (280)
                      |+.+|.+.+.+++.++.++   |++++.++|+.+.++........        ............        ....++.
T Consensus       137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~i~  205 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIY--------DFIMKLRRNPNVLEVLGDGTQRKSYLY  205 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHH--------HHHHHHHHCTTEEEEC----CEECEEE
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHH--------HHHHHHHhCCCCeEEcCCCCeEEeeEE
Confidence            9999999999999999986   79999999999999875421100        001111111000        1135788


Q ss_pred             HHHHHHHHHHhcCC-CCCCeeecEEEeCCccc
Q 023613          240 ANDVANAVLFLASD-EARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~~~~L~s~-~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+|+++++++.. ......|+.+++.+|..
T Consensus       206 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~  237 (312)
T 3ko8_A          206 VRDAVEATLAAWKKFEEMDAPFLALNVGNVDA  237 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSEEEEEESCSSC
T ss_pred             HHHHHHHHHHHHHhccccCCCCcEEEEcCCCc
Confidence            99999999999864 11345789999998764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.90  E-value=1.3e-22  Score=180.36  Aligned_cols=224  Identities=15%  Similarity=0.009  Sum_probs=162.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .++|++|||||+|+||++++++|+++|++|++++|+........     ...+.++.+|+++.+++.++++       ++
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----MFCDEFHLVDLRVMENCLKVTE-------GV   94 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----GTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-----cCCceEEECCCCCHHHHHHHhC-------CC
Confidence            45789999999999999999999999999999999865432110     1357788999999998877664       89


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc---------------
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI---------------  160 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------------  160 (280)
                      |+|||+||....  .   ....+++++.+++|+.++.++++++..    .+.++||++||.....               
T Consensus        95 d~Vih~A~~~~~--~---~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~  165 (379)
T 2c5a_A           95 DHVFNLAADMGG--M---GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKES  165 (379)
T ss_dssp             SEEEECCCCCCC--H---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGG
T ss_pred             CEEEECceecCc--c---cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcCcc
Confidence            999999997532  1   111345788999999999999998865    3346999999976533               


Q ss_pred             ---cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc------
Q 023613          161 ---GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA------  231 (280)
Q Consensus       161 ---~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  231 (280)
                         +..+...|+.+|.+.+.+++.++.++   |++++.++||.+.++..............   ..........      
T Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g  239 (379)
T 2c5a_A          166 DAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAA---FCRKAQTSTDRFEMWG  239 (379)
T ss_dssp             GGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHH---HHHHHHHCSSCEEEES
T ss_pred             cCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHH---HHHHHHhCCCceEEeC
Confidence               22345689999999999999998875   79999999999999864322111000000   0111111110      


Q ss_pred             --cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 --NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 --~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                        .....++.++|+|++++.++...    .|+.+++.+|..
T Consensus       240 ~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~  276 (379)
T 2c5a_A          240 DGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  276 (379)
T ss_dssp             CSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCC
T ss_pred             CCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCc
Confidence              01236788999999999999653    477889988754

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.90  E-value=3.4e-23  Score=179.64  Aligned_cols=220  Identities=17%  Similarity=0.118  Sum_probs=147.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-Ccch---HHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNL---GQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~---~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+.   ...+ ..+.. ..++.++.+|++|++++.++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999888 5422   2221 11111 1246788899999988877665      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHH-HHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC-------
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSE-FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG-------  164 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------  164 (280)
                       ++|+|||+|+...        .+.++ +++.+++|+.++.++++++.+..   +.++||++||..+..+.+.       
T Consensus        74 -~~d~vih~A~~~~--------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e  141 (322)
T 2p4h_X           74 -GCVGIFHTASPID--------FAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDE  141 (322)
T ss_dssp             -TCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred             -CCCEEEEcCCccc--------CCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCC
Confidence             7899999996321        11222 45689999999999999887641   3479999999875433211       


Q ss_pred             --------------C-ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh
Q 023613          165 --------------P-HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR  229 (280)
Q Consensus       165 --------------~-~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (280)
                                    . ..|+.+|++.+.+++.++.+   +|++++.++|+.+.+++.....+....      ........
T Consensus       142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~------~~~~~~~g  212 (322)
T 2p4h_X          142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIE------KALVLVLG  212 (322)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHH------HHTHHHHS
T ss_pred             ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHH------HHHHHHhC
Confidence                          1 16999999888877666544   589999999999999975433221100      00001111


Q ss_pred             hccCC--C--CCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          230 NANMQ--G--TELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       230 ~~~~~--~--~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      .....  +  .++.++|+|+++++++...  ..+|+ +++.++
T Consensus       213 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~~~~  252 (322)
T 2p4h_X          213 KKEQIGVTRFHMVHVDDVARAHIYLLENS--VPGGR-YNCSPF  252 (322)
T ss_dssp             CGGGCCEEEEEEEEHHHHHHHHHHHHHSC--CCCEE-EECCCE
T ss_pred             CCccCcCCCcCEEEHHHHHHHHHHHhhCc--CCCCC-EEEcCC
Confidence            00000  1  4789999999999999643  35676 445443

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.90  E-value=4e-23  Score=179.73  Aligned_cols=242  Identities=10%  Similarity=-0.018  Sum_probs=172.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecCcchH------------HHHHHHhCC-CCCeEEEecCCCCHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFH-KHGAKVCIADVQDNLG------------QQVCQSLGG-EPDTFFCHCDVTKEED   80 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~-~~g~~V~~~~r~~~~~------------~~~~~~~~~-~~~~~~~~~D~~~~~~   80 (280)
                      .+.+|++|||||++|||++++..|+ +.|+.++++.+..+..            ....+.+.. ..+...+.||+++.++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4678999999999999999999999 7899999988764322            122233322 3578899999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCCCC-----------CC---------------------CCCCCHHHHH---HHhh
Q 023613           81 VCSAVDLTVEKFGTLDIMVNNAGISGAPC-----------PD---------------------IREADLSEFE---KVFD  125 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~-----------~~---------------------~~~~~~~~~~---~~~~  125 (280)
                      ++++++++++.+|++|+|||+++......           ++                     +...+.++++   +.+.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            99999999999999999999999753100           00                     1223445544   4555


Q ss_pred             hhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC--CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeec
Q 023613          126 INVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT  203 (280)
Q Consensus       126 ~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~--~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T  203 (280)
                      ...++.|...+...+.|.  .+++++.+|+..+....|  ..+.++++|++|++.++.|+.++++  ++++++.||.+.|
T Consensus       207 ~s~~s~w~~al~~a~lla--~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT  282 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLE--EGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVT  282 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEE--EEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCC
T ss_pred             hhHHHHHHHHHHhhhccc--CCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCcccc
Confidence            567777777777777774  368999999988765544  4468999999999999999999975  8999999999999


Q ss_pred             cccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCC-ccccc
Q 023613          204 GLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDG-GFTSV  272 (280)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dg-G~~~~  272 (280)
                      .-......-. .+..      .+++-+    +...+.|.+.+.+..|..+. -|-++..+.+|+ |+.+.
T Consensus       283 ~AssaIP~~p-ly~~------~l~kvm----k~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~~~r~r~  340 (401)
T 4ggo_A          283 RASAVIPVIP-LYLA------SLFKVM----KEKGNHEGCIEQITRLYAER-LYRKDGTIPVDEENRIRI  340 (401)
T ss_dssp             TTGGGSSSHH-HHHH------HHHHHH----HHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCTTSCEES
T ss_pred             chhhcCCCch-HHHH------HHHHHH----HhcCCCCchHHHHHHHHHHh-hccCCCCCCcCCCCCccC
Confidence            9876654322 1111      111110    23346688999999988642 233333444666 45443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=3.8e-23  Score=170.72  Aligned_cols=209  Identities=10%  Similarity=0.018  Sum_probs=155.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||+|+||++++++|+++|++|++++|+.+.....      ...+.++.+|++|.+++.++++       ++|+|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   71 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------NEHLKVKKADVSSLDEVCEVCK-------GADAV   71 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------CTTEEEECCCTTCHHHHHHHHT-------TCSEE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------cCceEEEEecCCCHHHHHHHhc-------CCCEE
Confidence            6899999999999999999999999999999997654221      1578899999999999887765       79999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------CCccc
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------GPHAY  168 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----------~~~~Y  168 (280)
                      ||+||....            ..+.+++|+.+...+++++..    .+.+++|++||..+..+.+          +...|
T Consensus        72 i~~a~~~~~------------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y  135 (227)
T 3dhn_A           72 ISAFNPGWN------------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL  135 (227)
T ss_dssp             EECCCC------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred             EEeCcCCCC------------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence            999986421            123788999999998888765    3346999999987665433          35789


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +.+|.+.+.+.+.++.   ..|++++.++||.+.++......-.....       ..+.   ......+++++|+|++++
T Consensus       136 ~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~-------~~~~---~~~~~~~i~~~Dva~ai~  202 (227)
T 3dhn_A          136 PGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKD-------DMIV---DIVGNSHISVEDYAAAMI  202 (227)
T ss_dssp             HHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESS-------BCCC---CTTSCCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCC-------Cccc---CCCCCcEEeHHHHHHHHH
Confidence            9999999988888765   36899999999999887643221110000       0000   000135789999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .++...  ...|+.+.+.+..-.
T Consensus       203 ~~l~~~--~~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          203 DELEHP--KHHQERFTIGYLEHH  223 (227)
T ss_dssp             HHHHSC--CCCSEEEEEECCSCC
T ss_pred             HHHhCc--cccCcEEEEEeehhc
Confidence            999654  468999998876543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.90  E-value=3.4e-22  Score=178.73  Aligned_cols=235  Identities=14%  Similarity=0.004  Sum_probs=161.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-----------------HHHHHhC-CCCCeEEEecCCCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-----------------QVCQSLG-GEPDTFFCHCDVTK   77 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~-----------------~~~~~~~-~~~~~~~~~~D~~~   77 (280)
                      ..+.++|||||+|.||++++++|+++|++|++++|......                 .+.+... ...++.++.+|+++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            46889999999999999999999999999999988643211                 1111100 12467888999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      .+++.++++..     ++|+|||+||....   .....+.+++...+++|+.++.++++++.+.-   ...+||++||.+
T Consensus        89 ~~~~~~~~~~~-----~~D~Vih~A~~~~~---~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~~~~~V~~SS~~  157 (404)
T 1i24_A           89 FEFLAESFKSF-----EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGTMG  157 (404)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECCGG
T ss_pred             HHHHHHHHhcc-----CCCEEEECCCCCCc---cchhhCccchhhhHHHHHHHHHHHHHHHHHhC---CCcEEEEeCcHH
Confidence            99998887754     79999999997532   11223567788899999999999999987642   124999999976


Q ss_pred             ccc------------------------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCC---
Q 023613          158 GAI------------------------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHL---  210 (280)
Q Consensus       158 ~~~------------------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~---  210 (280)
                      ...                        +..+...|+.+|++.+.+++.++.++   |+++++++||.+.++......   
T Consensus       158 vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~  234 (404)
T 1i24_A          158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHE  234 (404)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSG
T ss_pred             HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccccc
Confidence            432                        22345689999999999999998886   799999999999998643210   


Q ss_pred             -------Cchhhhhhhhhh-HHHHHhhhcc-------CCCCCCCHHHHHHHHHHhcCCCCCCeee--cEEEeCC
Q 023613          211 -------PEEERTEDAMVG-FRNFVARNAN-------MQGTELTANDVANAVLFLASDEARYISG--TNLMVDG  267 (280)
Q Consensus       211 -------~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~dva~~~~~L~s~~~~~~~G--~~i~~dg  267 (280)
                             +.... ...... ..........       ....++.++|+|++++.++....  ..|  +.+++.+
T Consensus       235 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          235 ELRNRLDYDAVF-GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GGCCCCCCSTTT-CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             ccccccccccch-hhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence                   00000 000000 1111111110       11346889999999999986432  235  6888865

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.90  E-value=8.4e-23  Score=180.85  Aligned_cols=232  Identities=13%  Similarity=0.114  Sum_probs=164.3

Q ss_pred             CccccccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCC-CHHHHHHHHHH
Q 023613           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT-KEEDVCSAVDL   87 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~   87 (280)
                      ++.+..+++|++|||||+|+||++++++|+++ |++|++++|+.+....+.+    ...+.++.+|++ +.+++.++++ 
T Consensus        16 ~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~~d~~~~~~~~~-   90 (372)
T 3slg_A           16 TQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----HERMHFFEGDITINKEWVEYHVK-   90 (372)
T ss_dssp             -------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----STTEEEEECCTTTCHHHHHHHHH-
T ss_pred             hcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----CCCeEEEeCccCCCHHHHHHHhc-
Confidence            34455678899999999999999999999998 9999999998765443322    247889999999 9998887776 


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----  162 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----  162 (280)
                            ++|+|||+|+....      ....++.++.+++|+.+...+++++...    + .++|++||.......     
T Consensus        91 ------~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~  153 (372)
T 3slg_A           91 ------KCDVILPLVAIATP------ATYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQF  153 (372)
T ss_dssp             ------HCSEEEECBCCCCH------HHHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSB
T ss_pred             ------cCCEEEEcCccccH------HHHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCC
Confidence                  79999999997643      1234567789999999999999988654    3 699999996543221     


Q ss_pred             -------------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhH-HHHHh
Q 023613          163 -------------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVA  228 (280)
Q Consensus       163 -------------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~  228 (280)
                                   .+...|+.+|.+.+.+++.++.+    |+++..+.|+.+.++..................+ .....
T Consensus       154 ~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (372)
T 3slg_A          154 DPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR  229 (372)
T ss_dssp             CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHH
T ss_pred             CccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHc
Confidence                         12337999999999999888755    7999999999999887543221110000000111 11111


Q ss_pred             hhc-------cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCC
Q 023613          229 RNA-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       229 ~~~-------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      ...       .....++.++|+|++++.++........|+++++.+
T Consensus       230 ~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~  275 (372)
T 3slg_A          230 GENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGN  275 (372)
T ss_dssp             TCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             CCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCC
Confidence            110       011257899999999999997654446789999998

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.90  E-value=2.2e-22  Score=176.45  Aligned_cols=234  Identities=13%  Similarity=0.100  Sum_probs=161.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch----------HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----------GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      +|++|||||+|+||++++++|+++|++|++++|+...          .+.+.+..  ..++.++.+|+++.+++.++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHHh
Confidence            5889999999999999999999999999999875432          22222111  23678889999999998877764


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc------
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------  161 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------  161 (280)
                      .     ++|+|||+||....  .    .+.+++++.+++|+.++.++++++..    .+.++||++||......      
T Consensus        80 ~-----~~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~  144 (348)
T 1ek6_A           80 Y-----SFMAVIHFAGLKAV--G----ESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPL  144 (348)
T ss_dssp             C-----CEEEEEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             c-----CCCEEEECCCCcCc--c----chhhchHHHHHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCCCCCc
Confidence            2     89999999997532  1    13466889999999999999987654    34579999999765421      


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh--hhhhhhhHHHHHh-hhc-
Q 023613          162 ------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVA-RNA-  231 (280)
Q Consensus       162 ------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~-  231 (280)
                            .|....|+.+|++.+.+++.++.+  ..++++..+.|+.+..+.....+.....  .......+..... ... 
T Consensus       145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~  222 (348)
T 1ek6_A          145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREA  222 (348)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSC
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCC
Confidence                  122678999999999999999887  3469999999999987742111110000  0000011111111 110 


Q ss_pred             -------------cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 -------------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 -------------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                                   .....++.++|+|++++.++........++.+++.+|..
T Consensus       223 ~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~  274 (348)
T 1ek6_A          223 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG  274 (348)
T ss_dssp             EEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC
T ss_pred             eEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCC
Confidence                         011257889999999999885432122348999987753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.90  E-value=2.3e-23  Score=219.40  Aligned_cols=176  Identities=14%  Similarity=0.130  Sum_probs=138.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchH---HHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLG---QQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+|++|||||++|||+++|++|+++|++ |++++|+....   ++..+++. ...++.++.||+++.++++++++++.+ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence            6999999999999999999999999998 88889986543   23333332 235788899999999999999999874 


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      ++++|+||||||+...  ..+.+.+.++|++.+++|+.+++++.+++.+.|.+.  ++||++||.++..+.+++..|+++
T Consensus      1962 ~g~id~lVnnAgv~~~--~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRD--AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFA 2037 (2512)
T ss_dssp             HSCEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHH
T ss_pred             cCCCcEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHH
Confidence            7999999999999765  788999999999999999999999999999988543  899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCee
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAV  201 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v  201 (280)
                      |+++++|++..+.+    |+...++..|.+
T Consensus      2038 Kaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2038 NSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            99999999987655    677777777765

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.89  E-value=8e-22  Score=175.94  Aligned_cols=172  Identities=21%  Similarity=0.196  Sum_probs=135.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH-HcCCeEEEEecCcch---------HHHH---HHHhCCC---CC---eEEEecCCCCH
Q 023613           18 GRVALITGGATGIGESTVRLFH-KHGAKVCIADVQDNL---------GQQV---CQSLGGE---PD---TFFCHCDVTKE   78 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~-~~g~~V~~~~r~~~~---------~~~~---~~~~~~~---~~---~~~~~~D~~~~   78 (280)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+.+   .+.+...   ..   +.++.+|++++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999987543         2333   2333221   23   78899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      +++.+++++    ++++|+|||+||....  .    .+.+++++.+++|+.++.++++++..    .+.++||++||...
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~--~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~v  147 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAV--G----ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAI  147 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCc--C----cchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHHH
Confidence            998777653    4569999999997532  1    14567889999999999999998754    34579999999654


Q ss_pred             cccCC------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecccc
Q 023613          159 AIGGL------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       159 ~~~~~------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~  206 (280)
                      .....                  +...|+.+|++.+.+++.++.++   |++++.++|+.+.++..
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE  210 (397)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred             hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCCc
Confidence            32211                  25789999999999999999986   79999999999988853

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.89  E-value=7.7e-22  Score=172.59  Aligned_cols=226  Identities=13%  Similarity=0.067  Sum_probs=159.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH-HHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE-EDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d   96 (280)
                      +++|||||+|+||++++++|+++ |++|++++|+.+....+    .....+.++.+|+++. +.+.++++       ++|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~-------~~d   69 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVK-------KCD   69 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG----TTCTTEEEEECCTTTCSHHHHHHHH-------HCS
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh----hcCCCeEEEeccccCcHHHHHhhcc-------CCC
Confidence            47999999999999999999998 89999999987654322    1234688899999984 55655554       689


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-------------  163 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-------------  163 (280)
                      +|||+||....  .    ...+++++.+++|+.+..++++++..    .+ +++|++||.......+             
T Consensus        70 ~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~  138 (345)
T 2bll_A           70 VVLPLVAIATP--I----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (345)
T ss_dssp             EEEECBCCCCH--H----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             EEEEcccccCc--c----chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence            99999997532  1    12346788999999999999998865    33 7999999976542211             


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhh-HHHHHhhhc------
Q 023613          164 -----GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG-FRNFVARNA------  231 (280)
Q Consensus       164 -----~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------  231 (280)
                           +...|+.+|.+.+.+++.++.++   |++++.+.|+.+.++.................. .........      
T Consensus       139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (345)
T 2bll_A          139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (345)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence                 11279999999999999998875   799999999999988653211000000000000 111111110      


Q ss_pred             -cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          232 -NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       232 -~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                       .....++.++|+|++++.++........|+.+++.+|.
T Consensus       216 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence             01124889999999999999754334678999999874

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=2e-21  Score=171.86  Aligned_cols=229  Identities=12%  Similarity=0.063  Sum_probs=155.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-HHHHHhC-----CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSLG-----GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.     ...++.++.+|+++.+++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            478999999999999999999999999999999765321 1111111     1246788899999999998888755   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------  161 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~----------  161 (280)
                        ++|+||||||....      ..+.+++++.+++|+.++.++++++.+...+ +.++||++||......          
T Consensus        78 --~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~  148 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETT  148 (372)
T ss_dssp             --CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccC
Confidence              79999999997532      2344567889999999999999999886543 2479999999765432          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc--------c
Q 023613          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------N  232 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  232 (280)
                       ..+...|+.+|++.+.+++.++.++   ++.+..+.|..+..+.....+... ...   ...........        .
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~-~~~---~~~~~~~~g~~~~~~~g~~~  221 (372)
T 1db3_A          149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTR-KIT---RAIANIAQGLESCLYLGNMD  221 (372)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHH-HHH---HHHHHHHTTSCCCEEESCTT
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhh-HHH---HHHHHHHcCCCCceeecCCC
Confidence             1235789999999999999999885   456666666666555422211000 000   00111111110        0


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ....++.++|+|++++.++....    ++.+++.+|.
T Consensus       222 ~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  254 (372)
T 1db3_A          222 SLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGV  254 (372)
T ss_dssp             CEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCC
T ss_pred             ceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCC
Confidence            11357899999999999986432    4678877765

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=1e-21  Score=174.11  Aligned_cols=228  Identities=11%  Similarity=0.020  Sum_probs=159.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+...  ....+.++.+|++|.+++.++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999997543     211111110  1246788899999999998888755   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------  161 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~----------  161 (280)
                        ++|+|||+||....      ..+.+++++.+++|+.++..+++++.+... .+.++||++||......          
T Consensus       102 --~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCcccc------cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCccC
Confidence              79999999997532      123567889999999999999999988654 22379999999876432          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc--------
Q 023613          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN--------  232 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  232 (280)
                       ..+...|+.+|++.+.+++.++.++   ++.+..+.|+.+..+.....+......    ............        
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~----~~~~~~~~g~~~~~~~g~~~  245 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKIS----RSVAKIYLGQLECFSLGNLD  245 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHH----HHHHHHHHTSCSCEEESCTT
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHH----HHHHHHHcCCCceeEeCCCC
Confidence             1245789999999999999998875   577777888877666432211100000    001111111100        


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ....++.++|+|++++.++....    ++.+++.+|.
T Consensus       246 ~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  278 (375)
T 1t2a_A          246 AKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGE  278 (375)
T ss_dssp             CEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             ceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCC
Confidence            11357899999999999986432    3667776664

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.89  E-value=1.1e-22  Score=172.12  Aligned_cols=192  Identities=16%  Similarity=0.111  Sum_probs=147.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .|++|||||+|+||++++++|+++|++|++++|+.+..      ..  ..+.++.+|+++++++.++++       ++|+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~   66 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------AE--AHEEIVACDLADAQAVHDLVK-------DCDG   66 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC------CC--TTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc------cC--CCccEEEccCCCHHHHHHHHc-------CCCE
Confidence            36899999999999999999999999999999987531      11  356788999999988877665       6999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CC
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GP  165 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------------~~  165 (280)
                      ||||||...          .+++++.+++|+.++.++++++.+    .+.++||++||.......+            +.
T Consensus        67 vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~  132 (267)
T 3ay3_A           67 IIHLGGVSV----------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD  132 (267)
T ss_dssp             EEECCSCCS----------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC
T ss_pred             EEECCcCCC----------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC
Confidence            999999752          134688999999999999998875    3457999999987654332            34


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeee-ccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVA-TGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ..|+.+|++++.+++.++.+   +|++++.++||.+. ++.      ...          ..        ..+++++|+|
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~------~~~----------~~--------~~~~~~~dva  185 (267)
T 3ay3_A          133 SLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPK------DAR----------MM--------ATWLSVDDFM  185 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCC------SHH----------HH--------HHBCCHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCC------CCC----------ee--------eccccHHHHH
Confidence            78999999999999988653   68999999999984 321      000          00        3467999999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCC
Q 023613          245 NAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      ++++.++....  ..+..+.+.+
T Consensus       186 ~~~~~~~~~~~--~~~~~~~~~~  206 (267)
T 3ay3_A          186 RLMKRAFVAPK--LGCTVVYGAS  206 (267)
T ss_dssp             HHHHHHHHSSC--CCEEEEEECC
T ss_pred             HHHHHHHhCCC--CCceeEecCC
Confidence            99999986542  2234455443

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.88  E-value=1.7e-22  Score=177.92  Aligned_cols=227  Identities=15%  Similarity=0.094  Sum_probs=156.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.++++|++|||||+|+||++++++|+++| ++|++++|+.....  .+.+.   .+. +.+|+++.++++++++.  ..
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~~~-~~~d~~~~~~~~~~~~~--~~  112 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---DLN-IADYMDKEDFLIQIMAG--EE  112 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT---TSC-CSEEEEHHHHHHHHHTT--CC
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc---Cce-EeeecCcHHHHHHHHhh--cc
Confidence            345778999999999999999999999999 99999999765421  11111   122 67899998888776653  12


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC--------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--------  163 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~--------  163 (280)
                      ++++|+|||+||....        +.+++++.+++|+.++..+++++.+.    +. +||++||.......+        
T Consensus       113 ~~~~d~Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~  179 (357)
T 2x6t_A          113 FGDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESRE  179 (357)
T ss_dssp             CSSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGG
T ss_pred             cCCCCEEEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcC
Confidence            4589999999997532        23457889999999999999998873    23 899999987643322        


Q ss_pred             ---CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-------cC
Q 023613          164 ---GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NM  233 (280)
Q Consensus       164 ---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~  233 (280)
                         +...|+.+|.+.+.+++.++.+   .|++++.+.|+.+.++.............   ...........       ..
T Consensus       180 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  253 (357)
T 2x6t_A          180 YEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAF---HLNTQLNNGESPKLFEGSEN  253 (357)
T ss_dssp             GCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHH---HHHHHHHTTCCCEEETTGGG
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHH---HHHHHHHcCCCcEEeCCCCc
Confidence               2568999999999999998765   47999999999999886431100000000   00011111100       01


Q ss_pred             -CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          234 -QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       234 -~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                       ...++.++|+|+++++++....    |+.+++++|..
T Consensus       254 ~~~~~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~  287 (357)
T 2x6t_A          254 FKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRA  287 (357)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHCC----CEEEEESCSCC
T ss_pred             ceEccEEHHHHHHHHHHHHhcCC----CCeEEecCCCc
Confidence             2357899999999999996543    88999988753

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.88  E-value=1.6e-21  Score=173.25  Aligned_cols=230  Identities=13%  Similarity=0.014  Sum_probs=158.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-----HHHHHHHhCC-CC-CeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-----GQQVCQSLGG-EP-DTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+.... .. .+.++.+|+++.+++.++++..   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999997653     2221111110 12 6788999999999998888755   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccc----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAI----------  160 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~----------  160 (280)
                        ++|+|||+||....      ..+.+++++.+++|+.++..+++++.+...++ +.++||++||.....          
T Consensus       106 --~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~  177 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  177 (381)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCC
Confidence              79999999997532      13456788999999999999999999876432 246999999987543          


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc--------c
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------N  232 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  232 (280)
                      +..+...|+.+|++.+.+++.++.++   ++.+..+.|..+..+.....+... ...   ...........        .
T Consensus       178 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~-~~~---~~~~~~~~g~~~~~~~g~~~  250 (381)
T 1n7h_A          178 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTR-KIT---RALGRIKVGLQTKLFLGNLQ  250 (381)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHH-HHH---HHHHHHHHTSCCCEEESCTT
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhH-HHH---HHHHHHHcCCCCeEEeCCCC
Confidence            23346789999999999999998886   455544555544444321111000 000   00111111100        0


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ....++.++|+|+++++++....    ++.+++.+|..
T Consensus       251 ~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~  284 (381)
T 1n7h_A          251 ASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEEG  284 (381)
T ss_dssp             CEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSCE
T ss_pred             ceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCC
Confidence            11357899999999999997543    47888888753

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=1.5e-21  Score=170.22  Aligned_cols=230  Identities=15%  Similarity=0.058  Sum_probs=159.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH-HHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ-QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ..++++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.....+.++.+|+++.+++.++++..     +
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   86 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----Q   86 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----C
Confidence            34889999999999999999999999999999999765321 11222222346788999999999998888755     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------  163 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----------  163 (280)
                      +|+|||+||....      ..+.+++++.+++|+.++.++++++.+.   ...++||++||.....+.+           
T Consensus        87 ~d~Vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~  157 (335)
T 1rpn_A           87 PQEVYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFY  157 (335)
T ss_dssp             CSEEEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECccccch------hhhhhChHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence            9999999996431      1123457889999999999999998764   1137999999976543221           


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc--------CCC
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN--------MQG  235 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  235 (280)
                      +...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..+.....+... ...   ............        ...
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~-~~~---~~~~~~~~g~~~~~~~g~g~~~~  230 (335)
T 1rpn_A          158 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTR-KVT---DAVARIKLGKQQELRLGNVDAKR  230 (335)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHH-HHH---HHHHHHHTTSCSCEEESCTTCEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchH-HHH---HHHHHHHcCCCceEEeCCCccee
Confidence            24689999999999999998875   577888999988877543221100 000   001111111100        012


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       236 ~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      .++.++|+|++++.++....    ++.+++.+|..
T Consensus       231 ~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  261 (335)
T 1rpn_A          231 DWGFAGDYVEAMWLMLQQDK----ADDYVVATGVT  261 (335)
T ss_dssp             ECEEHHHHHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             ceEEHHHHHHHHHHHHhcCC----CCEEEEeCCCC
Confidence            47889999999999986542    36788877653

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.88  E-value=1.7e-21  Score=169.51  Aligned_cols=229  Identities=14%  Similarity=0.101  Sum_probs=160.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |++|||||+|+||++++++|+++|++|++++|+.....   +.+.  ..+.++.+|+++.+++.++++.     .++|+|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~--~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   71 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAIT--EGAKFYNGDLRDKAFLRDVFTQ-----ENIEAV   71 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSC--TTSEEEECCTTCHHHHHHHHHH-----SCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcC--CCcEEEECCCCCHHHHHHHHhh-----cCCCEE
Confidence            57999999999999999999999999999998754322   1222  2677889999999998877764     389999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCcc
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~  167 (280)
                      ||+||....      ..+.+++++.+++|+.++..+++++..    .+.+++|++||......           ..+...
T Consensus        72 ih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           72 MHFAADSLV------GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             EECCCCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             EECCcccCc------cccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            999997532      114467889999999999999998754    34479999999765432           123578


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh-hhhhhhhHHHHHhhhcc--------------
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER-TEDAMVGFRNFVARNAN--------------  232 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------------  232 (280)
                      |+.+|.+.+.+++.++.++   |+++..+.|+.+.++.....+..... .......+.........              
T Consensus       142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG  218 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence            9999999999999988764   79999999999998853221110000 00000011111111000              


Q ss_pred             -CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 -MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 -~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                       ....++.++|+|++++.++........|+.+++.+|..
T Consensus       219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~  257 (330)
T 2c20_A          219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNG  257 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTC
T ss_pred             ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCC
Confidence             01246889999999998885322222468899877653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.88  E-value=2e-21  Score=167.97  Aligned_cols=210  Identities=16%  Similarity=0.112  Sum_probs=154.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++|||||+|+||++++++|+++|++|++++|+..... + +      .+.++.+|++ .+++.++++       ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~------~~~~~~~Dl~-~~~~~~~~~-------~~d~   65 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-N------DYEYRVSDYT-LEDLINQLN-------DVDA   65 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------CCEEEECCCC-HHHHHHHTT-------TCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-C------ceEEEEcccc-HHHHHHhhc-------CCCE
Confidence            478999999999999999999999999999999844322 1 1      5778999999 888776655       8999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCc
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPH  166 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~  166 (280)
                      |||+|+....  .        +.++.+++|+.+..++++++..    .+-.++|++||.......           .+..
T Consensus        66 Vih~a~~~~~--~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (311)
T 3m2p_A           66 VVHLAATRGS--Q--------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDL  131 (311)
T ss_dssp             EEECCCCCCS--S--------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred             EEEccccCCC--C--------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence            9999997643  1        4467889999999999998865    334689999996653221           1346


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-------cCCCCCCC
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NMQGTELT  239 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  239 (280)
                      .|+.+|.+.+.+++.++.+   .|+++..+.|+.+.++..........       ..........       .....++.
T Consensus       132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~v~  201 (311)
T 3m2p_A          132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINR-------FFRQAFHGEQLTLHANSVAKREFLY  201 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHH-------HHHHHHTCCCEEESSBCCCCEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHH-------HHHHHHcCCCeEEecCCCeEEceEE
Confidence            8999999999999998876   58999999999999886542200000       0111111100       01125788


Q ss_pred             HHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          240 ANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+|++++.++....   .|+.+++.+|..
T Consensus       202 v~Dva~a~~~~~~~~~---~~~~~~i~~~~~  229 (311)
T 3m2p_A          202 AKDAAKSVIYALKQEK---VSGTFNIGSGDA  229 (311)
T ss_dssp             HHHHHHHHHHHTTCTT---CCEEEEECCSCE
T ss_pred             HHHHHHHHHHHHhcCC---CCCeEEeCCCCc
Confidence            9999999999997653   789999988754

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.88  E-value=8.9e-23  Score=178.34  Aligned_cols=227  Identities=19%  Similarity=0.166  Sum_probs=147.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH--HHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV--CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+.....  ...+....++.++.+|+++.+++.++++       ++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            78999999999999999999999999999988876432110  1112212357788999999888766654       78


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHH-HHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC------------
Q 023613           96 DIMVNNAGISGAPCPDIREADLSE-FEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG------------  162 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------------  162 (280)
                      |+|||+|+...     .   ..++ .++.+++|+.+..++++++.+..   ..++||++||.++..+.            
T Consensus        82 D~Vih~A~~~~-----~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~  150 (338)
T 2rh8_A           82 DFVFHVATPVH-----F---ASEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEK  150 (338)
T ss_dssp             SEEEEESSCCC-----C------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTT
T ss_pred             CEEEEeCCccC-----C---CCCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChh
Confidence            99999998542     1   1122 34589999999999999988642   24799999997642210            


Q ss_pred             ---------C---CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhh-hhhhhHHHHH--
Q 023613          163 ---------L---GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE-DAMVGFRNFV--  227 (280)
Q Consensus       163 ---------~---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~-~~~~~~~~~~--  227 (280)
                               +   ....|+.+|.+.+.+++.++.+   +|++++++.|+.+.++......+...... ..........  
T Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  227 (338)
T 2rh8_A          151 NWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLING  227 (338)
T ss_dssp             TTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHH
T ss_pred             hccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccccc
Confidence                     0   1115999999999988887765   47999999999999997654332210000 0000000000  


Q ss_pred             -hhhc-cC-CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          228 -ARNA-NM-QGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       228 -~~~~-~~-~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                       .... .. ...++.++|+|++++++++..  ...|.. .+.++
T Consensus       228 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~-~~~~~  268 (338)
T 2rh8_A          228 MKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRY-ICCAA  268 (338)
T ss_dssp             HHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEE-EECSE
T ss_pred             ccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCcE-EEecC
Confidence             0000 00 014789999999999998643  335654 44333

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.88  E-value=1.2e-21  Score=161.26  Aligned_cols=199  Identities=10%  Similarity=0.015  Sum_probs=142.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|+||++++++|+++|++|++++|+.+....+.     ...+.++.+|++|+++         +.++++|+||
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~~D~~d~~~---------~~~~~~d~vi   67 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----GATVATLVKEPLVLTE---------ADLDSVDAVV   67 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----CTTSEEEECCGGGCCH---------HHHTTCSEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----CCCceEEecccccccH---------hhcccCCEEE
Confidence            5999999999999999999999999999999987665432     1467889999999876         2335899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC--------------C
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG--------------P  165 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~--------------~  165 (280)
                      ||||....  ..           ...+|+.+.    +.+++.+.+.+ +++|++||..+..+.+.              .
T Consensus        68 ~~ag~~~~--~~-----------~~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           68 DALSVPWG--SG-----------RGYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             ECCCCCTT--SS-----------CTHHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             ECCccCCC--cc-----------hhhHHHHHH----HHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            99998622  11           124566665    45566666666 99999999877665443              6


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+.+|++.+.+ +   ......|+++..++||.+.++.....+....         ..+  ........+++++|+|+
T Consensus       130 ~~y~~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~---------~~~--~~~~~~~~~i~~~DvA~  194 (224)
T 3h2s_A          130 PWYDGALYQYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATSYVAGK---------DTL--LVGEDGQSHITTGNMAL  194 (224)
T ss_dssp             TTHHHHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCCEEEES---------SBC--CCCTTSCCBCCHHHHHH
T ss_pred             hhhHHHHHHHHHH-H---HHHhcCCCcEEEEcCccccCCCcccCceecc---------ccc--ccCCCCCceEeHHHHHH
Confidence            7899999998854 2   2234578999999999999873221110000         000  00011146799999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCC
Q 023613          246 AVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      +++.++...  ...|+.+++.|
T Consensus       195 ~~~~~l~~~--~~~g~~~~~~~  214 (224)
T 3h2s_A          195 AILDQLEHP--TAIRDRIVVRD  214 (224)
T ss_dssp             HHHHHHHSC--CCTTSEEEEEE
T ss_pred             HHHHHhcCc--cccCCEEEEec
Confidence            999999654  35688888754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.88  E-value=5.3e-22  Score=171.72  Aligned_cols=214  Identities=14%  Similarity=0.049  Sum_probs=125.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.           ..  ++.+|+++++++.++++..     ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~--~~~~Dl~d~~~~~~~~~~~-----~~d~   63 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------PK--FEQVNLLDSNAVHHIIHDF-----QPHV   63 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------CHHHHHHH-----CCSE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------CC--eEEecCCCHHHHHHHHHhh-----CCCE
Confidence            6889999999999999999999999999999987543           11  6779999999988887754     7999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc----------CCCCcc
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------GLGPHA  167 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~----------~~~~~~  167 (280)
                      |||+||....      ..+.+++++.+++|+.++.++++++.+.     ++++|++||.....+          ..+...
T Consensus        64 vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~  132 (315)
T 2ydy_A           64 IVHCAAERRP------DVVENQPDAASQLNVDASGNLAKEAAAV-----GAFLIYISSDYVFDGTNPPYREEDIPAPLNL  132 (315)
T ss_dssp             EEECC-------------------------CHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred             EEECCcccCh------hhhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence            9999997532      1345678999999999999999999873     249999999876543          234678


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccc---cCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL---AHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      |+.+|++.+.+++.++.       .+..+.|+.+..+...   ...+.  ........-..... .......++.++|+|
T Consensus       133 Y~~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva  202 (315)
T 2ydy_A          133 YGKTKLDGEKAVLENNL-------GAAVLRIPILYGEVEKLEESAVTV--MFDKVQFSNKSANM-DHWQQRFPTHVKDVA  202 (315)
T ss_dssp             HHHHHHHHHHHHHHHCT-------TCEEEEECSEECSCSSGGGSTTGG--GHHHHHCCSSCEEE-ECSSBBCCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeeeCCCCcccccHHHH--HHHHHHhcCCCeee-ccCceECcEEHHHHH
Confidence            99999999999988632       2345666666554432   11110  00000000000000 011235788999999


Q ss_pred             HHHHHhcCCC-CCCeeecEEEeCCccc
Q 023613          245 NAVLFLASDE-ARYISGTNLMVDGGFT  270 (280)
Q Consensus       245 ~~~~~L~s~~-~~~~~G~~i~~dgG~~  270 (280)
                      +++++++... .....|+.+++++|..
T Consensus       203 ~a~~~~~~~~~~~~~~~~~~~i~~~~~  229 (315)
T 2ydy_A          203 TVCRQLAEKRMLDPSIKGTFHWSGNEQ  229 (315)
T ss_dssp             HHHHHHHHHHHTCTTCCEEEECCCSCC
T ss_pred             HHHHHHHHhhccccCCCCeEEEcCCCc
Confidence            9999998642 1234688999998864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.87  E-value=8.9e-22  Score=172.45  Aligned_cols=224  Identities=13%  Similarity=0.055  Sum_probs=153.2

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +...+++|++|||||+|+||++++++|+++|++|++++|+........+.+....++.++.+|+.+..            
T Consensus        21 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------   88 (343)
T 2b69_A           21 GHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------   88 (343)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------
T ss_pred             cccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------
Confidence            34567899999999999999999999999999999999865422211122222346788899998752            


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------  160 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------  160 (280)
                      +.++|+|||+||....  ..    ..+++++.+++|+.++.++++++.+.    + .++|++||.....           
T Consensus        89 ~~~~d~vih~A~~~~~--~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~  157 (343)
T 2b69_A           89 YIEVDQIYHLASPASP--PN----YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDY  157 (343)
T ss_dssp             CCCCSEEEECCSCCSH--HH----HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTC
T ss_pred             hcCCCEEEECccccCc--hh----hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCcccc
Confidence            3589999999997532  10    12346788999999999999988763    2 4899999976532           


Q ss_pred             -----cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc---
Q 023613          161 -----GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN---  232 (280)
Q Consensus       161 -----~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  232 (280)
                           +..+...|+.+|.+.+.+++.++.++   |++++.+.|+.+.++........  ...   ............   
T Consensus       158 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~--~~~---~~~~~~~~~~~~~~~  229 (343)
T 2b69_A          158 WGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGR--VVS---NFILQALQGEPLTVY  229 (343)
T ss_dssp             CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCC--HHH---HHHHHHHHTCCEEEE
T ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCccc--HHH---HHHHHHHcCCCceEc
Confidence                 22234579999999999999998774   79999999999998864321100  000   001111111100   


Q ss_pred             ----CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 ----MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 ----~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                          ....++.++|+|++++.++...    .|+.+++.+|..
T Consensus       230 ~~~~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~  267 (343)
T 2b69_A          230 GSGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEE  267 (343)
T ss_dssp             SSSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCE
T ss_pred             CCCCeEEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCC
Confidence                1134789999999999998643    267888888753

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.87  E-value=4.9e-21  Score=157.09  Aligned_cols=203  Identities=13%  Similarity=0.077  Sum_probs=134.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|+||++++++|+++|++|++++|+.+....+.      ..+.++.+|++|+++         +.+.++|+||
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~D~~d~~~---------~~~~~~d~vi   66 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH------KDINILQKDIFDLTL---------SDLSDQNVVV   66 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC------SSSEEEECCGGGCCH---------HHHTTCSEEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc------CCCeEEeccccChhh---------hhhcCCCEEE
Confidence            5899999999999999999999999999999987665432      467889999999876         2335899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CCcc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GPHA  167 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------------~~~~  167 (280)
                      |+||....               ...+|+.+..    .+++.+.+.+.+++|++||..+..+.+            +...
T Consensus        67 ~~ag~~~~---------------~~~~~~~~~~----~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
T 3ew7_A           67 DAYGISPD---------------EAEKHVTSLD----HLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY  127 (221)
T ss_dssp             ECCCSSTT---------------TTTSHHHHHH----HHHHHHCSCCSSEEEEECCCC-------------------CCC
T ss_pred             ECCcCCcc---------------ccchHHHHHH----HHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence            99997421               1334555544    455556666678999999988765443            2456


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+.+|.+.+.+. .+..  ...|+++..++||.+.++.....  .  ....    ...+..  ......+++++|+|+++
T Consensus       128 y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~--~--~~~~----~~~~~~--~~~~~~~i~~~Dva~~~  194 (221)
T 3ew7_A          128 YPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTG--D--YQIG----KDHLLF--GSDGNSFISMEDYAIAV  194 (221)
T ss_dssp             SCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC-------------------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccC--c--eEec----ccccee--cCCCCceEeHHHHHHHH
Confidence            999999988863 2221  15789999999999988721110  0  0000    000000  00013578999999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +.++...  ...|+.+++.|-...
T Consensus       195 ~~~l~~~--~~~g~~~~~~~~~~~  216 (221)
T 3ew7_A          195 LDEIERP--NHLNEHFTVAGKLEH  216 (221)
T ss_dssp             HHHHHSC--SCTTSEEECCC----
T ss_pred             HHHHhCc--cccCCEEEECCCCcc
Confidence            9999654  457899998875543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.87  E-value=1.1e-21  Score=171.63  Aligned_cols=226  Identities=16%  Similarity=0.078  Sum_probs=154.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcC-------CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHG-------AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ..++++++|||||+|+||++++++|+++|       ++|++++|+.+....     ....++.++.+|+++.+++.++++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHHHHHHHh
Confidence            35789999999999999999999999999       899999997653211     112467788999999998877765


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccC-C-
Q 023613           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGG-L-  163 (280)
Q Consensus        87 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~-~-  163 (280)
                            +++|+|||+||...       ..+.+++++.+++|+.++..+++++.+...+. ..++||++||.....+. + 
T Consensus        85 ------~~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~  151 (342)
T 2hrz_A           85 ------ARPDVIFHLAAIVS-------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY  151 (342)
T ss_dssp             ------TCCSEEEECCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS
T ss_pred             ------cCCCEEEECCccCc-------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC
Confidence                  48999999998642       12456789999999999999999988753211 14799999998765432 1 


Q ss_pred             ---------CCccchhhHHHHHHHHHHHHHHHC--CCCeEEEEEe--CCeeeccccccCCCchhhhhhhhhhHHHHHhhh
Q 023613          164 ---------GPHAYTGSKHAVLGLNKNVAAELG--KYGIRVNCVS--PYAVATGLALAHLPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       164 ---------~~~~Y~~sK~al~~~~~~la~e~~--~~gi~v~~v~--pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (280)
                               +...|+.+|++.+.+++.++.++.  ...+|++.+.  ||.+.+....       ....   .........
T Consensus       152 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~-------~~~~---~~~~~~~~~  221 (342)
T 2hrz_A          152 PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG-------FFSN---ILREPLVGQ  221 (342)
T ss_dssp             SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG-------HHHH---HHHHHHTTC
T ss_pred             CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH-------HHHH---HHHHHhcCC
Confidence                     567899999999999998877631  1224555555  6654332100       0000   011111111


Q ss_pred             c--cCCC-----CCCCHHHHHHHHHHhcCCCCC-CeeecEEEeCC
Q 023613          231 A--NMQG-----TELTANDVANAVLFLASDEAR-YISGTNLMVDG  267 (280)
Q Consensus       231 ~--~~~~-----~~~~~~dva~~~~~L~s~~~~-~~~G~~i~~dg  267 (280)
                      .  .+.+     .++.++|+|++++.++..... ...|+.+++.|
T Consensus       222 ~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          222 EAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             CEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             CeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence            0  0111     257899999999998854311 11467888843

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.87  E-value=5.7e-21  Score=166.85  Aligned_cols=231  Identities=16%  Similarity=0.131  Sum_probs=153.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc----hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDN----LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ++|||||+|+||++++++|+++|++|++++|...    ..+.+.+...  .++.++.+|+++++++.++++.     .++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~-----~~~   74 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIRNEALMTEILHD-----HAI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT--SCCEEEECCTTCHHHHHHHHHH-----TTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcC--CcceEEEccCCCHHHHHHHhhc-----cCC
Confidence            6899999999999999999999999999876422    2222211111  3567889999999998877764     279


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------cC-C
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------GG-L  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------~~-~  163 (280)
                      |+|||+||....  .    ...+++++.+++|+.++..+++++..    .+.++||++||.....           +. +
T Consensus        75 D~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  144 (338)
T 1udb_A           75 DTVIHFAGLKAV--G----ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDNPKIPYVESFPTGT  144 (338)
T ss_dssp             SEEEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             CEEEECCccCcc--c----cchhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHHhCCCCCCCcCcccCCCC
Confidence            999999997532  1    12345678899999999999887654    3347999999976532           11 2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh--hhhhhhhHHHHHh-hhc---------
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVA-RNA---------  231 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~---------  231 (280)
                      ....|+.+|++++.+++.++.++  .++++..+.|+.+..+.....+.....  .......+..... +..         
T Consensus       145 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  222 (338)
T 1udb_A          145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcc
Confidence            36789999999999999999884  368999999988766521111100000  0000001111111 000         


Q ss_pred             -----cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          232 -----NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       232 -----~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                           .....++.++|+|++++.++........++.+++.+|.
T Consensus       223 ~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~  265 (338)
T 1udb_A          223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV  265 (338)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSC
T ss_pred             cCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCC
Confidence                 00125688999999998877432111234788887764

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.87  E-value=1.1e-21  Score=169.23  Aligned_cols=221  Identities=14%  Similarity=0.085  Sum_probs=158.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +|++|||||+|+||++++++|+++  |++|++++|+..... ..      ..+.++.+|++|.+++.+++++.     ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~------~~~~~~~~D~~d~~~~~~~~~~~-----~~   69 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV------NSGPFEVVNALDFNQIEHLVEVH-----KI   69 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH------HSSCEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc------CCCceEEecCCCHHHHHHHHhhc-----CC
Confidence            578999999999999999999999  899999999865532 11      13567899999999988877643     79


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC------------C
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG------------L  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------------~  163 (280)
                      |+|||+||....       ...+++++.+++|+.++.++++++.+    .+.+++|++||.....+.            .
T Consensus        70 d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  138 (312)
T 2yy7_A           70 TDIYLMAALLSA-------TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIME  138 (312)
T ss_dssp             CEEEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred             CEEEECCccCCC-------chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence            999999986431       12356788999999999999998865    334699999998654331            2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc-------CCCC
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN-------MQGT  236 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  236 (280)
                      +...|+.+|.+.+.+++.++.++   |++++.+.|+.+.++............   ...+.........       ....
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  212 (312)
T 2yy7_A          139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYA---VDIFYKAIADKKYECFLSSETKMP  212 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHH---HHHHHHHHHTSEEEESSCTTCCEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhH---HHHHHHHHcCCCeEEecCCCceee
Confidence            35689999999999999998775   799999999999886532211100000   0011111111110       1124


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCe-eecEEEeCC
Q 023613          237 ELTANDVANAVLFLASDEARYI-SGTNLMVDG  267 (280)
Q Consensus       237 ~~~~~dva~~~~~L~s~~~~~~-~G~~i~~dg  267 (280)
                      ++.++|+|++++.++....... .|+.+++.|
T Consensus       213 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          213 MMYMDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             EEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             eeeHHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            6789999999999986543222 258888875

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.86  E-value=2.2e-21  Score=184.11  Aligned_cols=227  Identities=12%  Similarity=0.062  Sum_probs=161.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH-HHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED-VCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   92 (280)
                      .+++|++|||||+|+||++++++|+++ |++|++++|+......+    ....++.++.+|+++.++ ++++++      
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----TTCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----ccCCceEEEECCCCCcHHHHHHhhc------
Confidence            357899999999999999999999998 89999999987654321    123468889999998764 544443      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC----------
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG----------  162 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~----------  162 (280)
                       ++|+|||+||....  .    ...+++++.+++|+.+..++++++.+.    + +++|++||.......          
T Consensus       382 -~~D~Vih~Aa~~~~--~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~r~V~~SS~~vyg~~~~~~~~E~~~  449 (660)
T 1z7e_A          382 -KCDVVLPLVAIATP--I----EYTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEVYGMCSDKYFDEDHS  449 (660)
T ss_dssp             -HCSEEEECCCCCCT--H----HHHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGGGBTCCSSSBCTTTC
T ss_pred             -CCCEEEECceecCc--c----ccccCHHHHHHhhhHHHHHHHHHHHHh----C-CEEEEEecHHHcCCCCCcccCCCcc
Confidence             68999999997532  1    123567889999999999999988763    3 799999997654221          


Q ss_pred             --------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccC----CCchhhhhhhhhhHHHHHhhh
Q 023613          163 --------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH----LPEEERTEDAMVGFRNFVARN  230 (280)
Q Consensus       163 --------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~----~~~~~~~~~~~~~~~~~~~~~  230 (280)
                              .+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.....    ........   ..........
T Consensus       450 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~---~~~~~~~~g~  523 (660)
T 1z7e_A          450 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAIT---QLILNLVEGS  523 (660)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHH---HHHHHHHHTC
T ss_pred             ccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHH---HHHHHHHcCC
Confidence                    112369999999999999998875   79999999999998864320    00000000   0011111111


Q ss_pred             c-------cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          231 A-------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       231 ~-------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      .       .....+++++|+|+++++++........|+++++++|.
T Consensus       524 ~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          524 PIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             CEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            0       01124788999999999999765444678999999884

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.86  E-value=1.4e-22  Score=165.76  Aligned_cols=201  Identities=13%  Similarity=0.047  Sum_probs=147.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+|++|||||+|+||++++++|+++|+  +|++++|+++.         ...++.++.+|+++++++.+++         
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~---------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGS---------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSC---------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhh---------
Confidence            478999999999999999999999998  99999998764         1246777889998876654433         


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|+|||+||....        +.+++++.+++|+.++..+++++.+.    +.+++|++||.....+  +...|+.+|++
T Consensus        66 ~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~~--~~~~y~~sK~~  131 (215)
T 2a35_A           66 IDTAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALEM----GARHYLVVSALGADAK--SSIFYNRVKGE  131 (215)
T ss_dssp             CSEEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHHT----TCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             hcEEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHHc----CCCEEEEECCcccCCC--CccHHHHHHHH
Confidence            8999999996431        24568889999999999999987653    4468999999876543  45689999999


Q ss_pred             HHHHHHHHHHHHCCCCeE-EEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          175 VLGLNKNVAAELGKYGIR-VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~-v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      ++.+++.       .|++ ++.++||.+.++.....+.....  .   ....+..   . ...+++++|+|++++.++..
T Consensus       132 ~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~--~---~~~~~~~---~-~~~~i~~~Dva~~~~~~~~~  195 (215)
T 2a35_A          132 LEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILA--A---PIARILP---G-KYHGIEACDLARALWRLALE  195 (215)
T ss_dssp             HHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTT--C---CCC-------C-HHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHH--H---hhhhccC---C-CcCcEeHHHHHHHHHHHHhc
Confidence            9988764       3788 99999999998864311100000  0   0000000   0 02356889999999999976


Q ss_pred             CCCCeeecEEEeCCcc
Q 023613          254 EARYISGTNLMVDGGF  269 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~  269 (280)
                      ..    |+.+++.++.
T Consensus       196 ~~----~~~~~i~~~~  207 (215)
T 2a35_A          196 EG----KGVRFVESDE  207 (215)
T ss_dssp             CC----SEEEEEEHHH
T ss_pred             CC----CCceEEcHHH
Confidence            43    6778877664

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.85  E-value=5.3e-21  Score=163.67  Aligned_cols=198  Identities=16%  Similarity=0.124  Sum_probs=147.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      -..+++|||||+|+||++++++|+++|++|++++|+                    .+|++|.+++.++++..     ++
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~-----~~   64 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------DLDITNVLAVNKFFNEK-----KP   64 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------cCCCCCHHHHHHHHHhc-----CC
Confidence            347899999999999999999999999999999986                    27999999988877754     89


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------C
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------G  164 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----------~  164 (280)
                      |+|||+||....      +.+.+++++.+++|+.++.++++++.+.    + .++|++||.....+..           +
T Consensus        65 d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~  133 (292)
T 1vl0_A           65 NVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTDYVFDGEAKEPITEFDEVNP  133 (292)
T ss_dssp             SEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSCCSSCBCTTSCCCC
T ss_pred             CEEEECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEechHHeECCCCCCCCCCCCCCCC
Confidence            999999996431      1234678999999999999999998773    2 3999999986543322           3


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-----cCCCCCCC
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-----NMQGTELT  239 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  239 (280)
                      ...|+.+|.+.+.+++.++.       .+..+.|+.+.++ .....+   ..      .........     .....++.
T Consensus       134 ~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~i~  196 (292)
T 1vl0_A          134 QSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVK---TM------INLGKTHDELKVVHDQVGTPTS  196 (292)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHH---HH------HHHHHHCSEEEEESSCEECCEE
T ss_pred             ccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHH---HH------HHHHhcCCcEEeecCeeeCCcc
Confidence            56899999999999887642       3678889988866 211000   00      011111100     01256789


Q ss_pred             HHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          240 ANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+|+++++++...    .|+.+++++|..
T Consensus       197 v~Dva~~~~~~~~~~----~~~~~~i~~~~~  223 (292)
T 1vl0_A          197 TVDLARVVLKVIDEK----NYGTFHCTCKGI  223 (292)
T ss_dssp             HHHHHHHHHHHHHHT----CCEEEECCCBSC
T ss_pred             HHHHHHHHHHHHhcC----CCcEEEecCCCC
Confidence            999999999999753    688999988853

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.84  E-value=3.6e-20  Score=160.52  Aligned_cols=215  Identities=14%  Similarity=0.073  Sum_probs=152.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +++++|||||+|+||++++++|+++|++|+++.|+.                   .+|+++.+++.++++..     ++|
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------~~D~~d~~~~~~~~~~~-----~~d   57 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASE-----RID   57 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------cCCccCHHHHHHHHHhc-----CCC
Confidence            357899999999999999999999999999888753                   27999999988877654     899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc---------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG---------------  161 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~---------------  161 (280)
                      +|||+|+....     .....++.++.+++|+.+...+++++...    +..++|++||......               
T Consensus        58 ~vih~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  128 (321)
T 1e6u_A           58 QVYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAKQPMAESELLQGT  128 (321)
T ss_dssp             EEEECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             EEEEcCeecCC-----cchhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence            99999986431     11234567889999999999999988763    3469999999765421               


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHh------hhcc--
Q 023613          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVA------RNAN--  232 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--  232 (280)
                       .|....|+.+|.+.+.+++.++.++   |++++.+.|+.+.++...............   ...+..      ....  
T Consensus       129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~  202 (321)
T 1e6u_A          129 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPAL---LRRFHEATAQKAPDVVVW  202 (321)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHH---HHHHHHHHHHTCSEEEEE
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHH---HHHHHHhhhcCCCceEEc
Confidence             1112589999999999999998775   799999999999988653211100000000   111111      0000  


Q ss_pred             ----CCCCCCCHHHHHHHHHHhcCCCCCC------eeecEEEeCCccc
Q 023613          233 ----MQGTELTANDVANAVLFLASDEARY------ISGTNLMVDGGFT  270 (280)
Q Consensus       233 ----~~~~~~~~~dva~~~~~L~s~~~~~------~~G~~i~~dgG~~  270 (280)
                          ....++.++|+|++++.++......      ..|+.+++.+|..
T Consensus       203 ~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~  250 (321)
T 1e6u_A          203 GSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD  250 (321)
T ss_dssp             SCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC
T ss_pred             CCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCC
Confidence                1125679999999999998643211      1368898877653

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=2.6e-20  Score=160.51  Aligned_cols=220  Identities=14%  Similarity=0.078  Sum_probs=151.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           20 VALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      ++|||||+|+||++++++|+++| +.|++++|+......  ..+.   .+. +.+|+++.+.++++++...  ++++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~~---~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNLV---DLN-IADYMDKEDFLIQIMAGEE--FGDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG--HHHH---TSC-CSEEEEHHHHHHHHHTTCC--CSSCCEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh--hhcC---cce-eccccccHHHHHHHHhccc--cCCCcEE
Confidence            48999999999999999999999 899999987654210  1111   111 5689988887766654110  1369999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------CCcc
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------GPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----------~~~~  167 (280)
                      ||+||....        +.+++++.+++|+.++.++++++.+.    +. ++|++||.......+           +...
T Consensus        73 i~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~  139 (310)
T 1eq2_A           73 FHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (310)
T ss_dssp             EECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             EECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence            999997532        23457889999999999999998764    33 899999986543221           2568


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh-------hccC-CCCCCC
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-------NANM-QGTELT  239 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~  239 (280)
                      |+.+|.+.+.+++.++.+   .|++++.+.||.+.++..............   ........       .... ...++.
T Consensus       140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~i~  213 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFH---LNTQLNNGESPKLFEGSENFKRDFVY  213 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHH---HHHHHHC-------------CBCEEE
T ss_pred             hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHH---HHHHHHcCCCcEEecCCCcceEccEE
Confidence            999999999999988765   589999999999998864311000000000   00000000       0001 235688


Q ss_pred             HHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          240 ANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+|++++.++....    |+.+++.+|..
T Consensus       214 v~Dva~~~~~~~~~~~----~~~~~i~~~~~  240 (310)
T 1eq2_A          214 VGDVADVNLWFLENGV----SGIFNLGTGRA  240 (310)
T ss_dssp             HHHHHHHHHHHHHHCC----CEEEEESCSCC
T ss_pred             HHHHHHHHHHHHhcCC----CCeEEEeCCCc
Confidence            9999999999986543    78999988754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.84  E-value=1.9e-20  Score=161.96  Aligned_cols=217  Identities=16%  Similarity=0.161  Sum_probs=152.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           20 VALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      ++|||||+|+||++++++|+++  |++|++++|+.+...          .+.++.+|++|.+++.++++.     .++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~~~~~~~~-----~~~d~   65 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------GIKFITLDVSNRDEIDRAVEK-----YSIDA   65 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------TCCEEECCTTCHHHHHHHHHH-----TTCCE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------CceEEEecCCCHHHHHHHHhh-----cCCcE
Confidence            3899999999999999999998  899999998765321          345788999999998887764     28999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC------------CC
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL------------GP  165 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------------~~  165 (280)
                      |||+|+....       ...+++++.+++|+.++.++++++.+    .+.+++|++||.....+..            +.
T Consensus        66 vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           66 IFHLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             EEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             EEECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            9999986431       12356788999999999999998865    3346999999987654321            35


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-------cCCCCCC
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NMQGTEL  238 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  238 (280)
                      ..|+.+|.+.+.+++.++.++   |++++.+.|+.+..+............   ...+........       .....++
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i  208 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYA---VEIFYYAVKREKYKCYLAPNRALPMM  208 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHH---HHHHHHHHTTCCEEECSCTTCCEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHH---HHHHHHHHhCCCceeecCccceeeee
Confidence            789999999999999988764   799999987766554321110000000   000111111110       0112357


Q ss_pred             CHHHHHHHHHHhcCCCCC-CeeecEEEeCCc
Q 023613          239 TANDVANAVLFLASDEAR-YISGTNLMVDGG  268 (280)
Q Consensus       239 ~~~dva~~~~~L~s~~~~-~~~G~~i~~dgG  268 (280)
                      .++|+|++++.++..... ...|+.+++.|+
T Consensus       209 ~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          209 YMPDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             EHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             EHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence            899999999888864332 335788998864

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.84  E-value=1.2e-21  Score=169.68  Aligned_cols=213  Identities=16%  Similarity=0.098  Sum_probs=143.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch----HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL----GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ++++|++|||||+|+||++++++|+++|++|++++|+...    ...+ ..+.....+.++.+|++              
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~--------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGT-GKFLEKPVLELEERDLS--------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTS-SEEECSCGGGCCHHHHT--------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhh-hhhccCCCeeEEeCccc--------------
Confidence            4668999999999999999999999999999999997652    1111 11111123344445544              


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC--------
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------  162 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--------  162 (280)
                         ++|+|||+|+....  .    ...++....++ |+.+..++++++...    +-.++|++||.......        
T Consensus        69 ---~~d~vi~~a~~~~~--~----~~~~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~  134 (321)
T 3vps_A           69 ---DVRLVYHLASHKSV--P----RSFKQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPED  134 (321)
T ss_dssp             ---TEEEEEECCCCCCH--H----HHTTSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ---cCCEEEECCccCCh--H----HHHhCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCC
Confidence               89999999997542  1    01112234556 999999999988664    24699999997654322        


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHCCCCe-EEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-c-----
Q 023613          163 ---LGPHAYTGSKHAVLGLNKNVAAELGKYGI-RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-N-----  232 (280)
Q Consensus       163 ---~~~~~Y~~sK~al~~~~~~la~e~~~~gi-~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----  232 (280)
                         .+...|+.+|.+.+.+++.++.+   .|+ ++..+.|+.+.++...........       ......... .     
T Consensus       135 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  204 (321)
T 3vps_A          135 SPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRL-------CANLLTRNELPVEGDG  204 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHH-------HHHHHHHSEEEEETTS
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHH-------HHHHHcCCCeEEeCCC
Confidence               23578999999999999998776   578 999999999998764431100000       111111110 0     


Q ss_pred             -CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 -MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 -~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                       ....++.++|+|++++.++.....   | .+++.+|..
T Consensus       205 ~~~~~~v~v~Dva~~~~~~~~~~~~---g-~~~i~~~~~  239 (321)
T 3vps_A          205 EQRRDFTYITDVVDKLVALANRPLP---S-VVNFGSGQS  239 (321)
T ss_dssp             CCEECEEEHHHHHHHHHHGGGSCCC---S-EEEESCSCC
T ss_pred             CceEceEEHHHHHHHHHHHHhcCCC---C-eEEecCCCc
Confidence             113568999999999999976543   7 999998864

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.84  E-value=5.5e-20  Score=175.62  Aligned_cols=241  Identities=12%  Similarity=0.083  Sum_probs=159.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH---HHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC---QSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.++++|++|||||+|+||++++++|+++|++|++++|+........   +.+. ...+.++.+|+++.+++.++++.. 
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC-
Confidence            34578999999999999999999999999999999998754321111   1111 235678899999999988877642 


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--------
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------  161 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--------  161 (280)
                          ++|+|||+||....  .    ...+..++.+++|+.++..+++++..    .+.++||++||......        
T Consensus        84 ----~~D~Vih~A~~~~~--~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~~~  149 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAV--G----ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMI  149 (699)
T ss_dssp             ----CCCEEEECCSCCCH--H----HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCC
T ss_pred             ----CCCEEEECCcccCc--C----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccccC
Confidence                89999999997532  1    11234567899999999999887754    33479999999765321        


Q ss_pred             -------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh--hhhhhhhHHHHHhhh--
Q 023613          162 -------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARN--  230 (280)
Q Consensus       162 -------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~--  230 (280)
                             ..+...|+.+|++++.+++.++.++ ..++++..+.|+.+..+.....+.....  .......+.......  
T Consensus       150 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  228 (699)
T 1z45_A          150 PIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRRE  228 (699)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSS
T ss_pred             CccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCC
Confidence                   1134689999999999999998875 3579999999999887642211111000  000001111111110  


Q ss_pred             -ccC------------CCCCCCHHHHHHHHHHhcCCC----CCCeeecEEEeCCccc
Q 023613          231 -ANM------------QGTELTANDVANAVLFLASDE----ARYISGTNLMVDGGFT  270 (280)
Q Consensus       231 -~~~------------~~~~~~~~dva~~~~~L~s~~----~~~~~G~~i~~dgG~~  270 (280)
                       ...            ...++.++|+|++++.++...    .....|+++++.+|..
T Consensus       229 ~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~  285 (699)
T 1z45_A          229 KLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKG  285 (699)
T ss_dssp             CCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCC
T ss_pred             ceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCC
Confidence             000            124678999999998887421    1123478899887753

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.84  E-value=1.9e-19  Score=164.56  Aligned_cols=229  Identities=14%  Similarity=0.072  Sum_probs=158.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc---CCeEEEEecCcchHHH---HHHHhCC-------------CCCeEEEecCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKH---GAKVCIADVQDNLGQQ---VCQSLGG-------------EPDTFFCHCDV   75 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~---g~~V~~~~r~~~~~~~---~~~~~~~-------------~~~~~~~~~D~   75 (280)
                      ..++|+||||||+|+||++++++|++.   |++|++++|+.+....   +.+.+..             ..++.++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            457999999999999999999999999   8999999998664332   2222221             14788999999


Q ss_pred             C------CHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCce
Q 023613           76 T------KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGT  149 (280)
Q Consensus        76 ~------~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~  149 (280)
                      +      +.+++.++++       ++|+|||+||....          +.+++.+++|+.++.++++++..    .+..+
T Consensus       150 ~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~----------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~~  208 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA----------FPYHELFGPNVAGTAELIRIALT----TKLKP  208 (478)
T ss_dssp             TSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB----------SSCCEEHHHHHHHHHHHHHHHTS----SSCCC
T ss_pred             CCcccCCCHHHHHHHHc-------CCCEEEECccccCC----------cCHHHHHHHHHHHHHHHHHHHHh----CCCCe
Confidence            8      5566666555       78999999997532          23457889999999999888754    33468


Q ss_pred             EEEEccccccccCCC----------------------CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccc
Q 023613          150 IISICSVAGAIGGLG----------------------PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLAL  207 (280)
Q Consensus       150 iv~isS~~~~~~~~~----------------------~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~  207 (280)
                      +|++||.........                      ...|+.+|.+.+.+++.++.+.   |++++.+.||.|.++...
T Consensus       209 ~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~  285 (478)
T 4dqv_A          209 FTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSY  285 (478)
T ss_dssp             EEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSS
T ss_pred             EEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCcc
Confidence            999999765322111                      1349999999999999998864   799999999999887432


Q ss_pred             cCC-CchhhhhhhhhhHHHHHh-hhcc--------------CCCCCCCHHHHHHHHHHhcCCC--CCCeeecEEEeCCcc
Q 023613          208 AHL-PEEERTEDAMVGFRNFVA-RNAN--------------MQGTELTANDVANAVLFLASDE--ARYISGTNLMVDGGF  269 (280)
Q Consensus       208 ~~~-~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i~~dgG~  269 (280)
                      ... .........   ...... ...+              ..-.++.++|+|++++.++...  .....|+++++.++.
T Consensus       286 ~g~~~~~~~~~~l---~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~  362 (478)
T 4dqv_A          286 AGQLNMSDWVTRM---VLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH  362 (478)
T ss_dssp             SSCCCTTBHHHHH---HHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC
T ss_pred             CCcCCHHHHHHHH---HHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC
Confidence            111 111111110   111111 1111              0124589999999999987531  123468899988775


Q ss_pred             c
Q 023613          270 T  270 (280)
Q Consensus       270 ~  270 (280)
                      .
T Consensus       363 ~  363 (478)
T 4dqv_A          363 D  363 (478)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.83  E-value=3.1e-20  Score=157.21  Aligned_cols=193  Identities=19%  Similarity=0.163  Sum_probs=139.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|+||++++++|++ |++|++++|+.+..       .   .   +.+|+++++++.++++..     ++|+||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-------~---~---~~~Dl~~~~~~~~~~~~~-----~~d~vi   62 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-------G---G---YKLDLTDFPRLEDFIIKK-----RPDVII   62 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-------T---C---EECCTTSHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-------C---C---ceeccCCHHHHHHHHHhc-----CCCEEE
Confidence            589999999999999999995 89999999987521       1   1   789999999998888755     799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------CCccch
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------GPHAYT  169 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----------~~~~Y~  169 (280)
                      ||||....      +.+.+++++.+++|+.++..+++++.+    . ++++|++||..+..+.+          +...|+
T Consensus        63 ~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~  131 (273)
T 2ggs_A           63 NAAAMTDV------DKCEIEKEKAYKINAEAVRHIVRAGKV----I-DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYG  131 (273)
T ss_dssp             ECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred             ECCcccCh------hhhhhCHHHHHHHhHHHHHHHHHHHHH----h-CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence            99997532      133567899999999999999999875    2 25999999988764433          257899


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccC-----CCCCCCHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-----QGTELTANDVA  244 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva  244 (280)
                      .+|++++.+++.    +     ....+.|+.+..+   ..+.  ..       +..........     ..++++++|+|
T Consensus       132 ~sK~~~e~~~~~----~-----~~~~iR~~~v~G~---~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~dva  190 (273)
T 2ggs_A          132 LSKLLGETFALQ----D-----DSLIIRTSGIFRN---KGFP--IY-------VYKTLKEGKTVFAFKGYYSPISARKLA  190 (273)
T ss_dssp             HHHHHHHHHHCC----T-----TCEEEEECCCBSS---SSHH--HH-------HHHHHHTTCCEEEESCEECCCBHHHHH
T ss_pred             HHHHHHHHHHhC----C-----CeEEEeccccccc---cHHH--HH-------HHHHHHcCCCEEeecCCCCceEHHHHH
Confidence            999999999877    2     2344555555421   0000  00       00000010000     25689999999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCC
Q 023613          245 NAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      ++++++++...   +| .++++|
T Consensus       191 ~~i~~~~~~~~---~g-~~~i~~  209 (273)
T 2ggs_A          191 SAILELLELRK---TG-IIHVAG  209 (273)
T ss_dssp             HHHHHHHHHTC---CE-EEECCC
T ss_pred             HHHHHHHhcCc---CC-eEEECC
Confidence            99999997542   45 888887

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.83  E-value=1.8e-19  Score=153.64  Aligned_cols=201  Identities=11%  Similarity=0.015  Sum_probs=145.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      |++|||||+|+||++++++|+++  |++|++++|+.+....+..     ..+.++.+|++|++++.++++       ++|
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~d~~~l~~~~~-------~~d   68 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-----QGVEVRHGDYNQPESLQKAFA-------GVS   68 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-----TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-----cCCeEEEeccCCHHHHHHHHh-------cCC
Confidence            56999999999999999999998  9999999998776654432     256788999999988776655       799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      +|||+|+.. .        . +      ++|+.+..++++++..    .+-++||++||..+. +  ....|+.+|.+.+
T Consensus        69 ~vi~~a~~~-~--------~-~------~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~-~--~~~~y~~~K~~~E  125 (287)
T 2jl1_A           69 KLLFISGPH-Y--------D-N------TLLIVQHANVVKAARD----AGVKHIAYTGYAFAE-E--SIIPLAHVHLATE  125 (287)
T ss_dssp             EEEECCCCC-S--------C-H------HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGG-G--CCSTHHHHHHHHH
T ss_pred             EEEEcCCCC-c--------C-c------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC-C--CCCchHHHHHHHH
Confidence            999999852 1        1 1      5788888888888754    344699999998764 2  2358999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR  256 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~  256 (280)
                      .+++.       .|++++.+.||.+.++.....+..      ... ..............+++++|+|++++.++.... 
T Consensus       126 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-  190 (287)
T 2jl1_A          126 YAIRT-------TNIPYTFLRNALYTDFFVNEGLRA------STE-SGAIVTNAGSGIVNSVTRNELALAAATVLTEEG-  190 (287)
T ss_dssp             HHHHH-------TTCCEEEEEECCBHHHHSSGGGHH------HHH-HTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS-
T ss_pred             HHHHH-------cCCCeEEEECCEeccccchhhHHH------Hhh-CCceeccCCCCccCccCHHHHHHHHHHHhcCCC-
Confidence            88753       579999999998877642111100      000 000000000112468999999999999996532 


Q ss_pred             CeeecEEEeCCccc
Q 023613          257 YISGTNLMVDGGFT  270 (280)
Q Consensus       257 ~~~G~~i~~dgG~~  270 (280)
                       ..|+.++++||..
T Consensus       191 -~~g~~~~i~~~~~  203 (287)
T 2jl1_A          191 -HENKTYNLVSNQP  203 (287)
T ss_dssp             -CTTEEEEECCSSC
T ss_pred             -CCCcEEEecCCCc
Confidence             4789999999853

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.83  E-value=5.1e-20  Score=158.75  Aligned_cols=222  Identities=11%  Similarity=0.039  Sum_probs=150.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+++|++|||||+|+||++++++|+++|+      +....          ...+.++.+|++|.+++.++++..     +
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~-----~   61 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED----------WVFVSSKDADLTDTAQTRALFEKV-----Q   61 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE----------EEECCTTTCCTTSHHHHHHHHHHS-----C
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc----------ccccCceecccCCHHHHHHHHhhc-----C
Confidence            36789999999999999999999999997      11000          012333468999999988877742     7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-------------
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-------------  161 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------------  161 (280)
                      +|+|||+|+....     ...+.++.++.+++|+.++.++++++...    +-.++|++||......             
T Consensus        62 ~d~Vih~A~~~~~-----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  132 (319)
T 4b8w_A           62 PTHVIHLAAMVGG-----LFRNIKYNLDFWRKNVHMNDNVLHSAFEV----GARKVVSCLSTCIFPDKTTYPIDETMIHN  132 (319)
T ss_dssp             CSEEEECCCCCCC-----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSCSSCCSSBCGGGGGB
T ss_pred             CCEEEECceeccc-----ccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEEcchhhcCCCCCCCcccccccc
Confidence            9999999997431     11223456788999999999999988653    3468999999865321             


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc------
Q 023613          162 ---GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN------  232 (280)
Q Consensus       162 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  232 (280)
                         .+....|+.+|.+.+.+++.++++.   |+++..+.|+.+.++..................+.........      
T Consensus       133 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (319)
T 4b8w_A          133 GPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGT  209 (319)
T ss_dssp             SCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCC
Confidence               1122259999999999999998875   7999999999999886532211111000000000000111111      


Q ss_pred             --CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 --MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 --~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                        ....++.++|+|++++.++.... ...|+++++.+|..
T Consensus       210 g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~  248 (319)
T 4b8w_A          210 GNPRRQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEEDE  248 (319)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGGC
T ss_pred             CCeeEEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCCc
Confidence              11246899999999999986532 24577888877653

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.82  E-value=6.2e-20  Score=156.65  Aligned_cols=194  Identities=14%  Similarity=0.076  Sum_probs=145.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|+||+++++.|+++|++|++++|.                    .+|++|.+++.++++..     ++|+||
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~D~~d~~~~~~~~~~~-----~~d~vi   61 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------LLDITNISQVQQVVQEI-----RPHIII   61 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------TSCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------ccCCCCHHHHHHHHHhc-----CCCEEE
Confidence            79999999999999999999999999999992                    37999999998888765     899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  168 (280)
                      |+||....      +...+++++.+++|+.++.++++++.+.     +.++|++||.....+.           .+...|
T Consensus        62 ~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           62 HCAAYTKV------DQAEKERDLAYVINAIGARNVAVASQLV-----GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             ECCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             ECCcccCh------HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            99997642      1122467899999999999999998764     2479999998654321           235689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc------cCCCCCCCHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA------NMQGTELTAND  242 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d  242 (280)
                      +.+|.+.+.+++.++.       +...+.|+.+.++......+          .+........      .....++.++|
T Consensus       131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~i~v~D  193 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVK----------TMIRLGKEREEISVVADQIGSPTYVAD  193 (287)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH----------HHHHHHTTCSEEEEECSCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHH----------HHHHHHHcCCCeEeecCcccCceEHHH
Confidence            9999999999887543       45789999998875322110          0111111100      01145788999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          243 VANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+++++++....    ++.+++.+|..
T Consensus       194 va~~~~~~~~~~~----~~~~~i~~~~~  217 (287)
T 3sc6_A          194 LNVMINKLIHTSL----YGTYHVSNTGS  217 (287)
T ss_dssp             HHHHHHHHHTSCC----CEEEECCCBSC
T ss_pred             HHHHHHHHHhCCC----CCeEEEcCCCc
Confidence            9999999997654    66899888763

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.81  E-value=1.2e-19  Score=167.15  Aligned_cols=224  Identities=13%  Similarity=0.074  Sum_probs=155.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH---HHHHHHh----------CCCCCeEEEecCCCCHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG---QQVCQSL----------GGEPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~---~~~~~~~----------~~~~~~~~~~~D~~~~~~~~~~   84 (280)
                      .|+||||||+|+||++++++|.+.|++|+++.|+....   +.+.+.+          ....++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            58999999999999999999999999999999987632   2221111          11257899999999977765  


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc--cc--
Q 023613           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--AI--  160 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~--~~--  160 (280)
                            ...++|+|||+|+....         ..+++..+++|+.+..++++++.+     ...++|++||...  ..  
T Consensus       228 ------~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~  287 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDI  287 (508)
T ss_dssp             ------CSSCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECT
T ss_pred             ------CccCCCEEEECCceecC---------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCcc
Confidence                  34689999999987531         235678889999999999998865     3478999999876  10  


Q ss_pred             --------------cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHH
Q 023613          161 --------------GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNF  226 (280)
Q Consensus       161 --------------~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~  226 (280)
                                    +......|+.+|.+.+.+++.++.    .|++++.+.||.+.++.....+................
T Consensus       288 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~  363 (508)
T 4f6l_B          288 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDL  363 (508)
T ss_dssp             TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHH
T ss_pred             CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHH
Confidence                          011457899999999999988653    58999999999999887544321110000000001111


Q ss_pred             Hhhhcc------CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          227 VARNAN------MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       227 ~~~~~~------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ......      ....++.++|+|++++.++....   .|+++++.+|..
T Consensus       364 ~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~  410 (508)
T 4f6l_B          364 LQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNK  410 (508)
T ss_dssp             TTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCE
T ss_pred             HHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCC
Confidence            111000      11247889999999999996543   789999988764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.81  E-value=4.8e-20  Score=158.15  Aligned_cols=202  Identities=16%  Similarity=0.042  Sum_probs=145.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      ++|||||+|+||++++++|+ +|++|++++|+..                ++.+|++|.+++.++++..     ++|+||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~-----~~d~vi   59 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRKL-----RPDVIV   59 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHhc-----CCCEEE
Confidence            69999999999999999999 8999999999762                3468999999988877743     799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  168 (280)
                      |+||....      ..+.+++++.+++|+.+..++++++..    .+ .++|++||.....+.           .+...|
T Consensus        60 h~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  128 (299)
T 1n2s_A           60 NAAAHTAV------DKAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (299)
T ss_dssp             ECCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             ECcccCCH------hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence            99996532      112345788899999999999998753    22 489999998654322           125689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-----cCCCCCCCHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-----NMQGTELTANDV  243 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dv  243 (280)
                      +.+|.+.+.+++.++.       +++.+.|+.+.++......+   .      ..........     .....++.++|+
T Consensus       129 ~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~i~v~Dv  192 (299)
T 1n2s_A          129 GKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAK---T------MLRLAKERQTLSVINDQYGAPTGAELL  192 (299)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH---H------HHHHHHHCSEEEEECSCEECCEEHHHH
T ss_pred             HHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHH---H------HHHHHhcCCCEEeecCcccCCeeHHHH
Confidence            9999999999877532       68899999999886431110   0      0111111100     011456789999


Q ss_pred             HHHHHHhcCCCCCCe-eecEEEeCCccc
Q 023613          244 ANAVLFLASDEARYI-SGTNLMVDGGFT  270 (280)
Q Consensus       244 a~~~~~L~s~~~~~~-~G~~i~~dgG~~  270 (280)
                      |++++.++....... .|+.+++.+|..
T Consensus       193 a~~~~~~~~~~~~~~~~~~~~~i~~~~~  220 (299)
T 1n2s_A          193 ADCTAHAIRVALNKPEVAGLYHLVAGGT  220 (299)
T ss_dssp             HHHHHHHHHHHHHCGGGCEEEECCCBSC
T ss_pred             HHHHHHHHHHhccccccCceEEEeCCCC
Confidence            999999986432122 578999988753

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.80  E-value=8.5e-19  Score=149.35  Aligned_cols=197  Identities=12%  Similarity=0.073  Sum_probs=137.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           20 VALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      ++|||||+|+||++++++|+++  |++|++++|+.+....+..     ..+.++.+|++|++++.++++       ++|+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~-------~~d~   68 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-----QGITVRQADYGDEAALTSALQ-------GVEK   68 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-----TTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-----CCCeEEEcCCCCHHHHHHHHh-------CCCE
Confidence            3899999999999999999998  9999999998776554432     246788999999988776654       7899


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      |||+|+...   .               .|+.+..++++++..    .+.++||++||..+.   +....|+.+|.+.+.
T Consensus        69 vi~~a~~~~---~---------------~~~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           69 LLLISSSEV---G---------------QRAPQHRNVINAAKA----AGVKFIAYTSLLHAD---TSPLGLADEHIETEK  123 (286)
T ss_dssp             EEECC--------------------------CHHHHHHHHHHH----HTCCEEEEEEETTTT---TCCSTTHHHHHHHHH
T ss_pred             EEEeCCCCc---h---------------HHHHHHHHHHHHHHH----cCCCEEEEECCCCCC---CCcchhHHHHHHHHH
Confidence            999998521   0               256666666666644    345799999998765   233589999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCC
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARY  257 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~  257 (280)
                      +++.       .|++++.+.||.+.++... .+..  ..    . ...+..........+++++|+|++++.++....  
T Consensus       124 ~~~~-------~~~~~~ilrp~~~~~~~~~-~~~~--~~----~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--  186 (286)
T 2zcu_A          124 MLAD-------SGIVYTLLRNGWYSENYLA-SAPA--AL----E-HGVFIGAAGDGKIASATRADYAAAAARVISEAG--  186 (286)
T ss_dssp             HHHH-------HCSEEEEEEECCBHHHHHT-THHH--HH----H-HTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--
T ss_pred             HHHH-------cCCCeEEEeChHHhhhhHH-HhHH--hh----c-CCceeccCCCCccccccHHHHHHHHHHHhcCCC--
Confidence            8763       4799999999988766421 0000  00    0 000000000112468899999999999997532  


Q ss_pred             eeecEEEeCCccc
Q 023613          258 ISGTNLMVDGGFT  270 (280)
Q Consensus       258 ~~G~~i~~dgG~~  270 (280)
                      .+|+.++++||..
T Consensus       187 ~~g~~~~i~~~~~  199 (286)
T 2zcu_A          187 HEGKVYELAGDSA  199 (286)
T ss_dssp             CTTCEEEECCSSC
T ss_pred             CCCceEEEeCCCc
Confidence            4789999999843

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.79  E-value=1.1e-19  Score=155.11  Aligned_cols=205  Identities=13%  Similarity=0.018  Sum_probs=145.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +++++|||| +|+||++++++|+++|++|++++|+.+.+         ...+.++.+|++|.+++.++++      +++|
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~------~~~d   65 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVH------LRPE   65 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGG------GCCS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhc------CCCC
Confidence            357899999 59999999999999999999999987642         2467788999999988776554      3699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCC
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGP  165 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~  165 (280)
                      +|||+|+..           ..+.+..+++|+.+..++++++.    +.+.+++|++||.......           .+.
T Consensus        66 ~vih~a~~~-----------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~  130 (286)
T 3gpi_A           66 ILVYCVAAS-----------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK  130 (286)
T ss_dssp             EEEECHHHH-----------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC
T ss_pred             EEEEeCCCC-----------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC
Confidence            999999853           13457788999999988888764    3445799999997653221           235


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVAN  245 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  245 (280)
                      ..|+.+|.+.+.+ +..        +++..+.|+.+.++........-       ..  ............++.++|+|+
T Consensus       131 ~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~-------~~--~~~~~~~~~~~~~i~v~Dva~  192 (286)
T 3gpi_A          131 DFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQA-------QT--PEQWPARNAWTNRIHRDDGAA  192 (286)
T ss_dssp             SHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHT-------TC--GGGSCSSBCEECEEEHHHHHH
T ss_pred             ChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHH-------Hh--cccCCCcCceeEEEEHHHHHH
Confidence            6899999999887 442        78999999999887643110000       00  000011111245789999999


Q ss_pred             HHHHhcCCCCCCeeecEEEeCCccc
Q 023613          246 AVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       246 ~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +++.++........|+.+++.+|..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~  217 (286)
T 3gpi_A          193 FIAYLIQQRSHAVPERLYIVTDNQP  217 (286)
T ss_dssp             HHHHHHHHHTTSCCCSEEEECCSCC
T ss_pred             HHHHHHhhhccCCCCceEEEeCCCC
Confidence            9999997533345689999988753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.77  E-value=1.8e-18  Score=152.08  Aligned_cols=212  Identities=13%  Similarity=0.050  Sum_probs=140.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecC-CCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD-VTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .+|++|||||+|+||++++++|+++|++|++++|+.+....  +.+.....+.++.+| ++|++++.++++       ++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~~~~v~~v~~D~l~d~~~l~~~~~-------~~   74 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAIPNVTLFQGPLLNNVPLMDTLFE-------GA   74 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTSTTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhhcCCcEEEECCccCCHHHHHHHHh-------cC
Confidence            46889999999999999999999999999999998765421  122222357788999 999998877665       78


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEcccc-ccccCCCCccchhhHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVA-GAIGGLGPHAYTGSKH  173 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~-~~~~~~~~~~Y~~sK~  173 (280)
                      |++|||++...                 ...|..+ .++++++.    +.+ -++||++||.. ...+.+....|..+|+
T Consensus        75 d~Vi~~a~~~~-----------------~~~~~~~-~~l~~aa~----~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~  132 (352)
T 1xgk_A           75 HLAFINTTSQA-----------------GDEIAIG-KDLADAAK----RAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF  132 (352)
T ss_dssp             SEEEECCCSTT-----------------SCHHHHH-HHHHHHHH----HHSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred             CEEEEcCCCCC-----------------cHHHHHH-HHHHHHHH----HcCCccEEEEeCCccccccCCCCCccHHHHHH
Confidence            99999987431                 0224444 45555443    333 47999999986 3444455678999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCC---chhhhhhhhhhHHHHHhhhccCCCCCCCH-HHHHHHHHH
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLP---EEERTEDAMVGFRNFVARNANMQGTELTA-NDVANAVLF  249 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dva~~~~~  249 (280)
                      +.+.+++.       .|++++.++||.+.+.......+   .......... . ... ........++++ +|+|++++.
T Consensus       133 ~~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~-~-~~~-~~~~~~~~~i~v~~Dva~ai~~  202 (352)
T 1xgk_A          133 TVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFE-W-HAP-FDPDIPLPWLDAEHDVGPALLQ  202 (352)
T ss_dssp             HHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEE-E-EES-SCTTSCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHH-------cCCCEEEEecceecCCchhcccccccccccCCCceE-E-eec-cCCCCceeeEecHHHHHHHHHH
Confidence            99998865       27999999999875543321100   0000000000 0 000 000001236788 899999999


Q ss_pred             hcCCCCCCeeecEEEeCCcc
Q 023613          250 LASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++........|+.+++.++.
T Consensus       203 ~l~~~~~~~~g~~~~l~~~~  222 (352)
T 1xgk_A          203 IFKDGPQKWNGHRIALTFET  222 (352)
T ss_dssp             HHHHCHHHHTTCEEEECSEE
T ss_pred             HHhCCchhhCCeEEEEecCC
Confidence            98643224468999998754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.77  E-value=3.4e-18  Score=146.74  Aligned_cols=211  Identities=14%  Similarity=0.051  Sum_probs=138.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|++|||||+|+||++++++|+++| ++|++++|+.+....  +.+. ...+.++.+|++|++++.++++       ++|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~-~~~~~~~~~D~~d~~~l~~~~~-------~~d   74 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELR-LQGAEVVQGDQDDQVIMELALN-------GAY   74 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHH-HTTCEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHH-HCCCEEEEecCCCHHHHHHHHh-------cCC
Confidence            5889999999999999999999999 999999998765421  1111 1246788999999998877665       799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc--cCCCCccchhhHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI--GGLGPHAYTGSKHA  174 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~--~~~~~~~Y~~sK~a  174 (280)
                      +|||+++....  .            ..+.|+.+...+++++    .+.+.++||++|+.....  +......|..+|.+
T Consensus        75 ~vi~~a~~~~~--~------------~~~~~~~~~~~~~~aa----~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~  136 (299)
T 2wm3_A           75 ATFIVTNYWES--C------------SQEQEVKQGKLLADLA----RRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE  136 (299)
T ss_dssp             EEEECCCHHHH--T------------CHHHHHHHHHHHHHHH----HHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred             EEEEeCCCCcc--c------------cchHHHHHHHHHHHHH----HHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence            99999985321  0            1234555555555544    334457899966543222  11224689999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ++.+++.       .|++++.+.||.+.+++.....+..... .. . . .+..........+++++|+|++++.++...
T Consensus       137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~-g~-~-~-~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (299)
T 2wm3_A          137 VEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPD-GK-S-Y-LLSLPTGDVPMDGMSVSDLGPVVLSLLKMP  205 (299)
T ss_dssp             HHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTT-SS-S-E-EECCCCTTSCEEEECGGGHHHHHHHHHHSH
T ss_pred             HHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCC-CC-E-E-EEEecCCCCccceecHHHHHHHHHHHHcCh
Confidence            9988764       3799999999999988654222211000 00 0 0 000000000124689999999999998643


Q ss_pred             CCCeeecEEEeCCc
Q 023613          255 ARYISGTNLMVDGG  268 (280)
Q Consensus       255 ~~~~~G~~i~~dgG  268 (280)
                      . ...|+.+.++|.
T Consensus       206 ~-~~~g~~~~~~g~  218 (299)
T 2wm3_A          206 E-KYVGQNIGLSTC  218 (299)
T ss_dssp             H-HHTTCEEECCSE
T ss_pred             h-hhCCeEEEeeec
Confidence            1 236889998864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.74  E-value=5.8e-17  Score=138.32  Aligned_cols=193  Identities=16%  Similarity=0.108  Sum_probs=131.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           20 VALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      ++|||||+|+||++++++|.+. |++|+++.|+.+....+.     ...+.++.+|++|++++.++++       ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-----~~~v~~~~~D~~d~~~l~~~~~-------~~d~v   69 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-----RGKVSVRQLDYFNQESMVEAFK-------GMDTV   69 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-----BTTBEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-----hCCCEEEEcCCCCHHHHHHHHh-------CCCEE
Confidence            5899999999999999999998 999999999887543321     2468889999999988776664       89999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGL  178 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  178 (280)
                      ||+||....         .       ..|+.+...+++++    .+.+-++||++||......    ..|..++...   
T Consensus        70 i~~a~~~~~---------~-------~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~----~~~~~~~~~~---  122 (289)
T 3e48_A           70 VFIPSIIHP---------S-------FKRIPEVENLVYAA----KQSGVAHIIFIGYYADQHN----NPFHMSPYFG---  122 (289)
T ss_dssp             EECCCCCCS---------H-------HHHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTT----CCSTTHHHHH---
T ss_pred             EEeCCCCcc---------c-------hhhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCC----CCCccchhHH---
Confidence            999986532         0       12555555555554    3455579999999654322    2333333221   


Q ss_pred             HHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh--ccCCC----CCCCHHHHHHHHHHhcC
Q 023613          179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN--ANMQG----TELTANDVANAVLFLAS  252 (280)
Q Consensus       179 ~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~dva~~~~~L~s  252 (280)
                        .+...+...|++++.+.||.+.+++...              ........  ..+.+    .+++++|+|++++.++.
T Consensus       123 --~~e~~~~~~g~~~~ilrp~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~  186 (289)
T 3e48_A          123 --YASRLLSTSGIDYTYVRMAMYMDPLKPY--------------LPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIK  186 (289)
T ss_dssp             --HHHHHHHHHCCEEEEEEECEESTTHHHH--------------HHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHcCCCEEEEeccccccccHHH--------------HHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHc
Confidence              2223333468999999999998875311              00111111  11112    27899999999999997


Q ss_pred             CCCCCeeecEEEeCCccc
Q 023613          253 DEARYISGTNLMVDGGFT  270 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~  270 (280)
                      .....  |+.++++ |..
T Consensus       187 ~~~~~--g~~~~~~-~~~  201 (289)
T 3e48_A          187 NPDTW--GKRYLLS-GYS  201 (289)
T ss_dssp             CGGGT--TCEEEEC-CEE
T ss_pred             CCCcC--CceEEeC-CCc
Confidence            65433  8999998 654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.74  E-value=2e-17  Score=140.88  Aligned_cols=196  Identities=7%  Similarity=-0.105  Sum_probs=134.9

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +++||||| |.||++++++|+++|++|++++|+.+....+..     ..+.++.+|+++.+            +.++|+|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~------------~~~~d~v   67 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-----SGAEPLLWPGEEPS------------LDGVTHL   67 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-----TTEEEEESSSSCCC------------CTTCCEE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-----CCCeEEEecccccc------------cCCCCEE
Confidence            68999998 999999999999999999999999877665433     35788999999832            4689999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCcc
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHA  167 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~  167 (280)
                      ||+|+....  .     .  ..          ...+++++...  ..+-.++|++||.......           .+...
T Consensus        68 i~~a~~~~~--~-----~--~~----------~~~l~~a~~~~--~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~  126 (286)
T 3ius_A           68 LISTAPDSG--G-----D--PV----------LAALGDQIAAR--AAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAA  126 (286)
T ss_dssp             EECCCCBTT--B-----C--HH----------HHHHHHHHHHT--GGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSH
T ss_pred             EECCCcccc--c-----c--HH----------HHHHHHHHHhh--cCCceEEEEeecceecCCCCCCCcCCCCCCCCCCH
Confidence            999997532  1     1  10          11223333221  1334799999997643221           12457


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+.+|.+.+.+++.+      .|+++..+.|+.+.++..........   .    ........ .....++.++|+|+++
T Consensus       127 Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~---~----~~~~~~~~-~~~~~~i~v~Dva~a~  192 (286)
T 3ius_A          127 RGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGK---G----GIRRIIKP-GQVFSRIHVEDIAQVL  192 (286)
T ss_dssp             HHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSS---S----CCCEEECT-TCCBCEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhc---C----CccccCCC-CcccceEEHHHHHHHH
Confidence            999999999988776      57999999999998886332110000   0    00000000 1124678899999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +.++....   .|+.+++.+|..
T Consensus       193 ~~~~~~~~---~g~~~~i~~~~~  212 (286)
T 3ius_A          193 AASMARPD---PGAVYNVCDDEP  212 (286)
T ss_dssp             HHHHHSCC---TTCEEEECCSCC
T ss_pred             HHHHhCCC---CCCEEEEeCCCC
Confidence            99997654   688999988764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.73  E-value=3.7e-17  Score=144.48  Aligned_cols=192  Identities=21%  Similarity=0.143  Sum_probs=140.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      ++|||||+|+||++++++|++.|+ +|+..+|+                        .+++++.++++       ++|+|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------~d~~~l~~~~~-------~~d~V   50 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------TKEEELESALL-------KADFI   50 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------CCHHHHHHHHH-------HCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------CCHHHHHHHhc-------cCCEE
Confidence            699999999999999999999998 67666554                        67888877776       69999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchhhHHHHHH
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLG  177 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~~sK~al~~  177 (280)
                      ||+||....          ++.++.+++|+.+..++++++..    .+. .++|++||.....    ...|+.+|.+.+.
T Consensus        51 ih~a~~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~  112 (369)
T 3st7_A           51 VHLAGVNRP----------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQATQ----DNPYGESKLQGEQ  112 (369)
T ss_dssp             EECCCSBCT----------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGGS----CSHHHHHHHHHHH
T ss_pred             EECCcCCCC----------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhcC----CCCchHHHHHHHH
Confidence            999997643          13455788999999998888743    333 3899999987653    5799999999999


Q ss_pred             HHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccC-------CCCCCCHHHHHHHHHHh
Q 023613          178 LNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANM-------QGTELTANDVANAVLFL  250 (280)
Q Consensus       178 ~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~L  250 (280)
                      +++.++++.   |+++..+.|+.+.++........-      ...+..........       ...++.++|+|++++.+
T Consensus       113 ~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  183 (369)
T 3st7_A          113 LLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSV------IATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRA  183 (369)
T ss_dssp             HHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCH------HHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHh---CCCEEEEECCceeCCCCCCCcchH------HHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHH
Confidence            999998874   688999999999888654321110      00111111111111       12467899999999999


Q ss_pred             cCCCCCCeeecEEEeCCccc
Q 023613          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +..... ..|+.+++.+|..
T Consensus       184 l~~~~~-~~~~~~~i~~~~~  202 (369)
T 3st7_A          184 IEGTPT-IENGVPTVPNVFK  202 (369)
T ss_dssp             HHTCCC-EETTEECCSCCEE
T ss_pred             HhCCcc-cCCceEEeCCCCc
Confidence            975432 2488999988743

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.70  E-value=1.9e-16  Score=136.12  Aligned_cols=200  Identities=14%  Similarity=0.112  Sum_probs=128.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-------chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-------NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +|+++||||+|+||++++++|++.|++|+++.|+.       +..+.+ +.+. ...+.++.+|++|++++.++++    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~-~~~v~~v~~D~~d~~~l~~~~~----   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQ-SLGVILLEGDINDHETLVKAIK----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHH-HTTCEEEECCTTCHHHHHHHHT----
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHH-hCCCEEEEeCCCCHHHHHHHHh----
Confidence            57799999999999999999999999999999986       333332 2221 1347788999999988877665    


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccc------cCC
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAI------GGL  163 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~------~~~  163 (280)
                         ++|+|||++|...                     +.+...+++++..    .+ -.++|.  |..+..      ..|
T Consensus        76 ---~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~--S~~g~~~~~~~~~~p  125 (307)
T 2gas_A           76 ---QVDIVICAAGRLL---------------------IEDQVKIIKAIKE----AGNVKKFFP--SEFGLDVDRHDAVEP  125 (307)
T ss_dssp             ---TCSEEEECSSSSC---------------------GGGHHHHHHHHHH----HCCCSEEEC--SCCSSCTTSCCCCTT
T ss_pred             ---CCCEEEECCcccc---------------------cccHHHHHHHHHh----cCCceEEee--cccccCcccccCCCc
Confidence               7999999998631                     2344455555433    33 457763  433321      112


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCch-hhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE-ERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ....| .+|++++.+++.       .|++++.++||++.+.+........ .....  ... ... ........+++++|
T Consensus       126 ~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~--~~~-~~~-~~~~~~~~~i~~~D  193 (307)
T 2gas_A          126 VRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPR--DKV-VIL-GDGNVKGAYVTEAD  193 (307)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCS--SEE-EEE-TTSCSEEEEECHHH
T ss_pred             chhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCC--CeE-EEe-cCCCcceEEeeHHH
Confidence            24578 999999887753       3688999999999886543221100 00000  000 000 00001135689999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCC
Q 023613          243 VANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      +|++++.++....  ..|+.+.+.|
T Consensus       194 va~~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          194 VGTFTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHHHHHcCcc--ccCceEEEeC
Confidence            9999999997542  2467777764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.69  E-value=9.3e-16  Score=134.87  Aligned_cols=216  Identities=13%  Similarity=0.044  Sum_probs=142.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC-----CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHG-----AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +|++|||||+|+||++++++|+++|     ++|++++|+.....     . ...++.++.+|++|.+++.++++..    
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~-~~~~~~~~~~Dl~d~~~~~~~~~~~----   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H-EDNPINYVQCDISDPDDSQAKLSPL----   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C-CSSCCEEEECCTTSHHHHHHHHTTC----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c-ccCceEEEEeecCCHHHHHHHHhcC----
Confidence            5789999999999999999999999     99999999865432     1 1246788899999998887766522    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEE-------EEccccccccC---
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTII-------SICSVAGAIGG---  162 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv-------~isS~~~~~~~---  162 (280)
                      +++|+|||+||...           ++.++.+++|+.+..++++++.+..  .+-.++|       ++||.......   
T Consensus        71 ~~~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           71 TDVTHVFYVTWANR-----------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             TTCCEEEECCCCCC-----------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             CCCCEEEECCCCCc-----------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccC
Confidence            24999999998642           2467889999999999999887642  1235676       68876532111   


Q ss_pred             -----------CCCccchhhHHHHHHHHHHHHHHHCCCC-eEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHH-hh
Q 023613          163 -----------LGPHAYTGSKHAVLGLNKNVAAELGKYG-IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFV-AR  229 (280)
Q Consensus       163 -----------~~~~~Y~~sK~al~~~~~~la~e~~~~g-i~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~  229 (280)
                                 +....|    .+.+.+++.++   ..+| +++..+.|+.+..+....... .....   .-...+. ..
T Consensus       138 ~~~~~E~~~~~~~~~~y----~~~E~~~~~~~---~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~---~~~~~~~~~~  206 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFY----YDLEDIMLEEV---EKKEGLTWSVHRPGNIFGFSPYSMMN-LVGTL---CVYAAICKHE  206 (364)
T ss_dssp             CSSBCTTSCCCSSCCHH----HHHHHHHHHHH---TTSTTCEEEEEEESSEECCCTTCSSC-HHHHH---HHHHHHHHHH
T ss_pred             CCCCCccccCCccchhh----HHHHHHHHHHh---hcCCCceEEEECCCceeCCCCCcccc-hHHHH---HHHHHHHHhc
Confidence                       112345    23344444433   2245 999999999999876542211 00000   0011110 01


Q ss_pred             hc--cCC---------CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          230 NA--NMQ---------GTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       230 ~~--~~~---------~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ..  ...         -.+++++|+|++++.++...  ...|+.+++.+|.
T Consensus       207 g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~  255 (364)
T 2v6g_A          207 GKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGD  255 (364)
T ss_dssp             TCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSC
T ss_pred             CCceecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCC
Confidence            11  101         13455689999999998543  2468899998885

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.66  E-value=1e-15  Score=131.87  Aligned_cols=204  Identities=12%  Similarity=0.070  Sum_probs=131.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-----hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-----LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++|||||+|+||++++++|++.|++|+++.|+..     ..+.+ +.+. ...+.++.+|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~~d~~~l~~~~~------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK-QLGAKLIEASLDDHQRLVDALK------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH-TTTCEEECCCSSCHHHHHHHHT------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH-hCCeEEEeCCCCCHHHHHHHHh------
Confidence            467999999999999999999999999999999842     22222 2221 2357788999999988877665      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEcccccccc-------CCC
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIG-------GLG  164 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~-------~~~  164 (280)
                       ++|+|||+++....  .               .|+.+...+++++..    .+ -++||+ | ..+...       .+.
T Consensus        76 -~~d~vi~~a~~~~~--~---------------~~~~~~~~l~~aa~~----~g~v~~~v~-S-~~g~~~~~~~~~~~p~  131 (313)
T 1qyd_A           76 -QVDVVISALAGGVL--S---------------HHILEQLKLVEAIKE----AGNIKRFLP-S-EFGMDPDIMEHALQPG  131 (313)
T ss_dssp             -TCSEEEECCCCSSS--S---------------TTTTTHHHHHHHHHH----SCCCSEEEC-S-CCSSCTTSCCCCCSST
T ss_pred             -CCCEEEECCccccc--h---------------hhHHHHHHHHHHHHh----cCCCceEEe-c-CCcCCccccccCCCCC
Confidence             79999999987532  1               256666666666543    33 467874 3 333111       133


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCch--hhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ...| .+|.+++.+.+.       .|+++..+.||++.+..........  .....  ... ... ........+++++|
T Consensus       132 ~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~-~~g~~~~~~i~~~D  199 (313)
T 1qyd_A          132 SITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPR--DKV-LIY-GDGNVKGIWVDEDD  199 (313)
T ss_dssp             THHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCS--SEE-CCB-TTSCSEEEEECHHH
T ss_pred             cchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCC--CeE-EEe-CCCCceEEEEEHHH
Confidence            4578 999998887752       4788899999998775432211100  00000  000 000 00001134689999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCC
Q 023613          243 VANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      +|++++.++....  ..|+.+.+.|
T Consensus       200 va~~~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          200 VGTYTIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHHHHHHHTTCGG--GSSSEEECCC
T ss_pred             HHHHHHHHHhCcc--cCCceEEEeC
Confidence            9999999996542  2467777665

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.66  E-value=1.7e-15  Score=132.62  Aligned_cols=206  Identities=12%  Similarity=0.070  Sum_probs=134.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc----chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      +.+++|||||+|+||+++++.|++.|++|+++.|+.    +..+.+ +.+. ...+.++.+|++|.+++.+++++.    
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~-~~~v~~~~~Dl~d~~~l~~~~~~~----   82 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF-KALE-DKGAIIVYGLINEQEAMEKILKEH----   82 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHH-HTTCEEEECCTTCHHHHHHHHHHT----
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHH-hCCcEEEEeecCCHHHHHHHHhhC----
Confidence            367899999999999999999999999999999976    222222 1221 146788999999999988877643    


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc----ccCCCCccc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA----IGGLGPHAY  168 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~----~~~~~~~~Y  168 (280)
                       ++|+|||+++.                     .|+.+...+++++...-   .-.++|+ |+....    .+.++...|
T Consensus        83 -~~d~Vi~~a~~---------------------~n~~~~~~l~~aa~~~g---~v~~~v~-S~~g~~~~e~~~~~p~~~y  136 (346)
T 3i6i_A           83 -EIDIVVSTVGG---------------------ESILDQIALVKAMKAVG---TIKRFLP-SEFGHDVNRADPVEPGLNM  136 (346)
T ss_dssp             -TCCEEEECCCG---------------------GGGGGHHHHHHHHHHHC---CCSEEEC-SCCSSCTTTCCCCTTHHHH
T ss_pred             -CCCEEEECCch---------------------hhHHHHHHHHHHHHHcC---CceEEee-cccCCCCCccCcCCCcchH
Confidence             89999999975                     17778888888776531   1346664 432221    112345689


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ..+|.+.+.+.+.       .|+++..++||.+.+...............  ...... .........+++++|+|++++
T Consensus       137 ~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~--~~~~~~-~g~g~~~~~~i~~~Dva~~~~  206 (346)
T 3i6i_A          137 YREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPP--TDFFQI-YGDGNVKAYFVAGTDIGKFTM  206 (346)
T ss_dssp             HHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCC--SSCEEE-ETTSCCCEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCC--CceEEE-ccCCCceEEecCHHHHHHHHH
Confidence            9999998887764       478999999999877543221110000000  000000 000001135789999999999


Q ss_pred             HhcCCCCCCeeecEEEeC
Q 023613          249 FLASDEARYISGTNLMVD  266 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~d  266 (280)
                      .++...  ...|+.+.+.
T Consensus       207 ~~l~~~--~~~~~~~~i~  222 (346)
T 3i6i_A          207 KTVDDV--RTLNKSVHFR  222 (346)
T ss_dssp             HHTTCG--GGTTEEEECC
T ss_pred             HHHhCc--cccCeEEEEe
Confidence            999654  2346667765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.65  E-value=2e-15  Score=139.27  Aligned_cols=204  Identities=15%  Similarity=0.039  Sum_probs=137.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      ++++|||||+|.||+++++.|++.|++|++++|+.....             .+.+|+.+..         .+.+.++|+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-------------~v~~d~~~~~---------~~~l~~~D~  204 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-------------KRFWDPLNPA---------SDLLDGADV  204 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-------------CEECCTTSCC---------TTTTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-------------ceeecccchh---------HHhcCCCCE
Confidence            679999999999999999999999999999999876421             2556776421         223358999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCc
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPH  166 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~  166 (280)
                      |||+||....  .   ..+.+..+..+++|+.+..++++++..   +.+.++||++||......           ..+..
T Consensus       205 Vih~A~~~~~--~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~  276 (516)
T 3oh8_A          205 LVHLAGEPIF--G---RFNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMISASAVGFYGHDRGDEILTEESESGDD  276 (516)
T ss_dssp             EEECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred             EEECCCCccc--c---ccchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence            9999997532  1   455677889999999999999997543   234579999999765420           11345


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh-hcc------CCCCCCC
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-NAN------MQGTELT  239 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~  239 (280)
                      .|+.+|...+.+.+.    ....|+++..+.||.+.++... ..+          .+...... ...      ....++.
T Consensus       277 ~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~-~~~----------~~~~~~~~g~~~~~g~g~~~~~~i~  341 (516)
T 3oh8_A          277 FLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGG-MLP----------LLKTLFSTGLGGKFGDGTSWFSWIA  341 (516)
T ss_dssp             HHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBS-HHH----------HHHHTTC---CCCCTTSCCEECEEE
T ss_pred             hHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCC-hHH----------HHHHHHHhCCCcccCCCCceEceEe
Confidence            677778776665432    3346899999999999887521 000          00000000 000      1125688


Q ss_pred             HHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          240 ANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++|+|++++.++....  ..| .+++.+|.
T Consensus       342 v~Dva~ai~~~l~~~~--~~g-~~ni~~~~  368 (516)
T 3oh8_A          342 IDDLTDIYYRAIVDAQ--ISG-PINAVAPN  368 (516)
T ss_dssp             HHHHHHHHHHHHHCTT--CCE-EEEESCSC
T ss_pred             HHHHHHHHHHHHhCcc--cCC-cEEEECCC
Confidence            9999999999996543  344 56666653

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.63  E-value=7.7e-16  Score=133.30  Aligned_cols=199  Identities=13%  Similarity=0.049  Sum_probs=125.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc------chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD------NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++||||+|+||++++++|++.|++|++++|+.      +..+.+ +.+. ...+.++.+|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l-~~~~-~~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLR-EEFR-SMGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHH-HHHH-HTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHH-HHhh-cCCcEEEEecCCCHHHHHHHHc-----
Confidence            46799999999999999999999999999999986      222222 1121 1357788999999988877665     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEcccccccc---C---CC
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIG---G---LG  164 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~---~---~~  164 (280)
                        ++|+|||+++...                     +.+...+++++..    .+ -++||  .|..+...   .   +.
T Consensus        77 --~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v--~S~~g~~~~~~~~~~p~  127 (321)
T 3c1o_A           77 --QVDIVISALPFPM---------------------ISSQIHIINAIKA----AGNIKRFL--PSDFGCEEDRIKPLPPF  127 (321)
T ss_dssp             --TCSEEEECCCGGG---------------------SGGGHHHHHHHHH----HCCCCEEE--CSCCSSCGGGCCCCHHH
T ss_pred             --CCCEEEECCCccc---------------------hhhHHHHHHHHHH----hCCccEEe--ccccccCccccccCCCc
Confidence              6999999998531                     3334444555443    33 45776  34433211   1   11


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCc--hhhhhhhhhhHHHHHhhhccCCCCCCCHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPE--EERTEDAMVGFRNFVARNANMQGTELTAND  242 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  242 (280)
                      ...| .+|++++.+++.       .|+++..+.||.+.+.........  .......   .. . .........+++++|
T Consensus       128 ~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~~~~~i~~~D  194 (321)
T 3c1o_A          128 ESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDD---IV-I-YGTGETKFVLNYEED  194 (321)
T ss_dssp             HHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSC---EE-E-ETTSCCEEEEECHHH
T ss_pred             chHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCc---eE-E-ecCCCcceeEeeHHH
Confidence            3578 999999888763       267888899998876542110000  0000000   00 0 000001135789999


Q ss_pred             HHHHHHHhcCCCCCCeeecEEEeCC
Q 023613          243 VANAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       243 va~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      +|++++.++....  ..|+.+.+.|
T Consensus       195 va~~~~~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          195 IAKYTIKVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHHHHHHHHCGG--GTTEEEECCC
T ss_pred             HHHHHHHHHhCcc--ccCeEEEEeC
Confidence            9999999997543  2477788765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.61  E-value=8e-16  Score=133.06  Aligned_cols=198  Identities=12%  Similarity=0.079  Sum_probs=124.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|++|||||+|+||++++++|++.|++|+++.|+.. ..+.+ +.+. ...+.++.+|++|++++.++++       ++|
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-~~l~-~~~v~~v~~Dl~d~~~l~~a~~-------~~d   81 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLL-DEFQ-SLGAIIVKGELDEHEKLVELMK-------KVD   81 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHH-HHHH-HTTCEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHH-HHhh-cCCCEEEEecCCCHHHHHHHHc-------CCC
Confidence            467999999999999999999999999999999875 32222 2221 1347788999999998877665       799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEcccccccc---C---CCCccch
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIG---G---LGPHAYT  169 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~---~---~~~~~Y~  169 (280)
                      +|||+++...                     +.+...+++++..    .+ -++||+ | ..+...   .   +....| 
T Consensus        82 ~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~-S-~~g~~~~~~~~~~p~~~~y-  133 (318)
T 2r6j_A           82 VVISALAFPQ---------------------ILDQFKILEAIKV----AGNIKRFLP-S-DFGVEEDRINALPPFEALI-  133 (318)
T ss_dssp             EEEECCCGGG---------------------STTHHHHHHHHHH----HCCCCEEEC-S-CCSSCTTTCCCCHHHHHHH-
T ss_pred             EEEECCchhh---------------------hHHHHHHHHHHHh----cCCCCEEEe-e-ccccCcccccCCCCcchhH-
Confidence            9999998531                     2233444444433    33 457764 3 333211   1   113468 


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      .+|.+++.+.+.       .|+++..+.||.+............ .....   . .. .........+++++|+|++++.
T Consensus       134 ~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~-~~~~~---~-~~-~~~~~~~~~~i~~~Dva~~~~~  200 (318)
T 2r6j_A          134 ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPY-DPKDE---I-TV-YGTGEAKFAMNYEQDIGLYTIK  200 (318)
T ss_dssp             HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTT-CCCSE---E-EE-ETTSCCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhcccc-CCCCc---e-EE-ecCCCceeeEeeHHHHHHHHHH
Confidence            899998887753       4688888999988654321100000 00000   0 00 0000011346889999999999


Q ss_pred             hcCCCCCCeeecEEEeCC
Q 023613          250 LASDEARYISGTNLMVDG  267 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dg  267 (280)
                      ++....  ..|+.+.+.|
T Consensus       201 ~l~~~~--~~~~~~~~~g  216 (318)
T 2r6j_A          201 VATDPR--ALNRVVIYRP  216 (318)
T ss_dssp             HTTCGG--GTTEEEECCC
T ss_pred             HhcCcc--ccCeEEEecC
Confidence            997542  2366777654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.60  E-value=3.5e-15  Score=128.25  Aligned_cols=201  Identities=12%  Similarity=0.106  Sum_probs=125.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-----HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-----QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .|+++||||+|+||++++++|++.|++|+++.|+....     .+..+.+. ...+.++.+|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHc------
Confidence            46799999999999999999999999999999975321     11112221 2357789999999998877766      


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEcccccccc------CCCC
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIG------GLGP  165 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~------~~~~  165 (280)
                       ++|+|||+++...                     +.+...+++++..    .+ -+++|+ |+ .+...      .|..
T Consensus        77 -~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~-S~-~g~~~~~~~~~~p~~  128 (308)
T 1qyc_A           77 -NVDVVISTVGSLQ---------------------IESQVNIIKAIKE----VGTVKRFFP-SE-FGNDVDNVHAVEPAK  128 (308)
T ss_dssp             -TCSEEEECCCGGG---------------------SGGGHHHHHHHHH----HCCCSEEEC-SC-CSSCTTSCCCCTTHH
T ss_pred             -CCCEEEECCcchh---------------------hhhHHHHHHHHHh----cCCCceEee-cc-cccCccccccCCcch
Confidence             7999999998531                     2233444555443    33 457763 43 33211      1223


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCch-hhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE-ERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ..| .+|.+++.+.+.       .|+++..+.||.+.+.......... .....  ... ... ........+++++|+|
T Consensus       129 ~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~-~~~~~~~~~i~~~Dva  196 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPR--DKV-VIL-GDGNARVVFVKEEDIG  196 (308)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCS--SEE-EEE-TTSCCEEEEECHHHHH
T ss_pred             hHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCC--Cce-EEe-cCCCceEEEecHHHHH
Confidence            468 999998887754       3678888999998775432211100 00000  000 000 0000113468899999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCC
Q 023613          245 NAVLFLASDEARYISGTNLMVDG  267 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dg  267 (280)
                      ++++.++....  ..|+.+.+.|
T Consensus       197 ~~~~~~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          197 TFTIKAVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             HHHHTTSSCGG--GTTEEEECCC
T ss_pred             HHHHHHHhCcc--ccCeEEEEeC
Confidence            99999996532  2367777764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.45  E-value=3e-12  Score=109.52  Aligned_cols=203  Identities=16%  Similarity=0.068  Sum_probs=127.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      +||||||+|.||++++++|.++|++|+++.|++..           .+   +..|     .+      ..+...++|.+|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------~~---~~~~-----~~------~~~~l~~~d~vi   56 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------GR---ITWD-----EL------AASGLPSCDAAV   56 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------TE---EEHH-----HH------HHHCCCSCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------Ce---eecc-----hh------hHhhccCCCEEE
Confidence            48999999999999999999999999999997542           11   1121     11      112346899999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-----------CCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-----------GPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-----------~~~~Y  168 (280)
                      |.||....  ......+.+..+..++.|+.+...+.+.+...  +.+...+|+.||.....+..           +...|
T Consensus        57 hla~~~i~--~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~  132 (298)
T 4b4o_A           57 NLAGENIL--NPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFF  132 (298)
T ss_dssp             ECCCCCSS--CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHH
T ss_pred             EeccCccc--chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccccchh
Confidence            99986433  34445677778888999999988888776543  22334577777765433211           22334


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh-------hccCCCCCCCHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-------NANMQGTELTAN  241 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  241 (280)
                      +..|...+.     +......++++..+.|+.+..+..... .          .+......       .......++..+
T Consensus       133 ~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~-~----------~~~~~~~~~~~~~~g~g~~~~~~ihv~  196 (298)
T 4b4o_A          133 SNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAM-G----------HMLLPFRLGLGGPIGSGHQFFPWIHIG  196 (298)
T ss_dssp             HHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHH-H----------HHHHHHHTTCCCCBTTSCSBCCEEEHH
T ss_pred             HHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCch-h----------HHHHHHhcCCcceecccCceeecCcHH
Confidence            444433322     122345689999999999987742110 0          00010000       011113467899


Q ss_pred             HHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          242 DVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       242 dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+++++++++...  ...| .+++.++..
T Consensus       197 Dva~a~~~~~~~~--~~~g-~yn~~~~~~  222 (298)
T 4b4o_A          197 DLAGILTHALEAN--HVHG-VLNGVAPSS  222 (298)
T ss_dssp             HHHHHHHHHHHCT--TCCE-EEEESCSCC
T ss_pred             HHHHHHHHHHhCC--CCCC-eEEEECCCc
Confidence            9999999998543  2345 778776653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.41  E-value=3e-14  Score=121.63  Aligned_cols=110  Identities=16%  Similarity=0.183  Sum_probs=83.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|++|||||++|+|++++..|+++|++|++++|+.++.+++.+.+.....+.++.+|+++++++.++++       .
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~  188 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------G  188 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------T
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------h
Confidence            478999999999999999999999999999999999988877776655321234567799999988766554       5


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCH-HHHHHHhhhhhHhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADL-SEFEKVFDINVKGVF  132 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  132 (280)
                      +|++|||+|....+ .++.+.+. ++++..+++|+.+++
T Consensus       189 ~DvlVn~ag~g~~~-~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          189 AHFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             CSEEEECCCTTCCS-BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             CCEEEECCCccccC-CChhHcCchHHHHHHHHhhhhhhH
Confidence            89999999864321 22222332 455667888888765

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.13  E-value=2.6e-10  Score=92.91  Aligned_cols=79  Identities=18%  Similarity=0.188  Sum_probs=61.8

Q ss_pred             ccCCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCH
Q 023613           15 RLVGRVALITGG----------------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        15 ~l~~k~vlItGa----------------~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~   78 (280)
                      +|+||++|||||                +||||+++|++|+++|++|++++++... .       ....+  -.+|+.+.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~-------~~~g~--~~~dv~~~   74 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P-------TPPFV--KRVDVMTA   74 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C-------CCTTE--EEEECCSH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c-------cCCCC--eEEccCcH
Confidence            588999999999                5899999999999999999998886521 1       01112  24677775


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCC
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISG  106 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~  106 (280)
                      ++   +++.+.+.++++|++|||||+..
T Consensus        75 ~~---~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           75 LE---MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HH---HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HH---HHHHHHHhcCCCCEEEECCcccC
Confidence            44   56777788899999999999864

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.13  E-value=1.1e-10  Score=101.29  Aligned_cols=162  Identities=14%  Similarity=0.068  Sum_probs=105.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCc--chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA-------KVCIADVQD--NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++++||||+|.||.+++..|++.|+       .|++.++.+  +........+.. ...+  + .|+.+.++..+.    
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a----   77 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVA----   77 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHH----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHH----
Confidence            4699999999999999999999986       799998874  222222222221 1122  2 355443333222    


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc--------cc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG--------AI  160 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~--------~~  160 (280)
                         +.+.|+|||.||....+     ..   +..+.+++|+.+...+++++...-  ....+++++|+...        ..
T Consensus        78 ---~~~~D~Vih~Ag~~~~~-----~~---~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~  144 (327)
T 1y7t_A           78 ---FKDADYALLVGAAPRKA-----GM---ERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNA  144 (327)
T ss_dssp             ---TTTCSEEEECCCCCCCT-----TC---CHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTC
T ss_pred             ---hCCCCEEEECCCcCCCC-----CC---CHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHc
Confidence               23799999999976431     12   345689999999999999887651  13468888877541        11


Q ss_pred             -cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeec
Q 023613          161 -GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVAT  203 (280)
Q Consensus       161 -~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T  203 (280)
                       +.++...|+.+|...+.+...+++.+.   +.+..++|..+..
T Consensus       145 ~~~~p~~~yg~tkl~~er~~~~~a~~~g---~~~~~vr~~~V~G  185 (327)
T 1y7t_A          145 PGLNPRNFTAMTRLDHNRAKAQLAKKTG---TGVDRIRRMTVWG  185 (327)
T ss_dssp             TTSCGGGEEECCHHHHHHHHHHHHHHHT---CCGGGEECCEEEB
T ss_pred             CCCChhheeccchHHHHHHHHHHHHHhC---cChhheeeeEEEc
Confidence             233456799999999999998888753   3344444444333

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.94  E-value=5.6e-09  Score=76.14  Aligned_cols=74  Identities=16%  Similarity=0.165  Sum_probs=61.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|+++..+.+.     ...+.++.+|+.+.+++.++++       ++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~~   70 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----RMGVATKQVDAKDEAGLAKALG-------GF   70 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----TTTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----hCCCcEEEecCCCHHHHHHHHc-------CC
Confidence            3678999999 999999999999999 88999999988776654     1345678899999877765543       89


Q ss_pred             cEEEECCC
Q 023613           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |++|++++
T Consensus        71 d~vi~~~~   78 (118)
T 3ic5_A           71 DAVISAAP   78 (118)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999995

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.93  E-value=5.5e-10  Score=91.19  Aligned_cols=80  Identities=15%  Similarity=0.271  Sum_probs=59.7

Q ss_pred             CCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH
Q 023613           17 VGRVALITGG----------------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED   80 (280)
Q Consensus        17 ~~k~vlItGa----------------~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   80 (280)
                      +||++|||||                +|++|.++|++|+++|++|++++|+.....      .....+..  .|+.   +
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~------~~~~~~~~--~~v~---s   70 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP------EPHPNLSI--REIT---N   70 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC------CCCTTEEE--EECC---S
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cCCCCeEE--EEHh---H
Confidence            4899999999                778999999999999999999999754210      00112333  3443   5


Q ss_pred             HHHHHHHHHHHcCCccEEEECCCCCCC
Q 023613           81 VCSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        81 ~~~~~~~~~~~~~~~d~li~~ag~~~~  107 (280)
                      ++++++.+.+.++++|++|+||++...
T Consensus        71 ~~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           71 TKDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCccccc
Confidence            566678888888899999999998643

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.72  E-value=5.4e-08  Score=86.73  Aligned_cols=80  Identities=16%  Similarity=0.180  Sum_probs=68.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC---CeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           19 RVALITGGATGIGESTVRLFHKHG---AKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g---~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+|| |+||+++++.|++.|   ..|++++|+.++++++.+.+..  ..++..+.+|+++.++++++++..     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47899999 899999999999998   4899999999988888777642  135788899999999999888865     


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|+||||+|.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.70  E-value=2.5e-08  Score=77.03  Aligned_cols=74  Identities=19%  Similarity=0.187  Sum_probs=59.9

Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCcchH------HHHHHHhCCCCCeEEEecCCCCH--HHHHHHHHHHHHHcCCccEEEE
Q 023613           29 GIGESTVRLFHKHGAKVCIADVQDNLG------QQVCQSLGGEPDTFFCHCDVTKE--EDVCSAVDLTVEKFGTLDIMVN  100 (280)
Q Consensus        29 giG~~la~~l~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~li~  100 (280)
                      -++.++++.|+++|++|++..|++...      .+..+..  ..++..+.+|++++  ++++++++.+.+.+|+ |++||
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            467999999999999999998865432      2223322  24677889999999  9999999999998899 99999


Q ss_pred             CCCCC
Q 023613          101 NAGIS  105 (280)
Q Consensus       101 ~ag~~  105 (280)
                      |||+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99974

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.68  E-value=2e-11  Score=109.79  Aligned_cols=126  Identities=18%  Similarity=0.292  Sum_probs=75.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---------CCCCCeEEEec---CCCCHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---------GGEPDTFFCHC---DVTKEEDVC   82 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~~~---D~~~~~~~~   82 (280)
                      ++.||+++|||++ +||+++|+.|+..|++|+++++++....+.....         ....++.+...   |+-+.+.  
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e~--  338 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDH--  338 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHHH--
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHHH--
Confidence            4789999999998 9999999999999999999999876655443321         11123333221   2222221  


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHH-------hhhhhHhHHHHH-HHHHHhcccCCCceEEEEc
Q 023613           83 SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV-------FDINVKGVFHGM-KHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~-------~~~n~~~~~~l~-~~~~~~l~~~~~~~iv~is  154 (280)
                        ++    . -+.+.+|+|+|...      .+.+.+.++..       +..|+....... +..++.+   ..|+|||++
T Consensus       339 --l~----~-mk~gaiVvNaG~~~------~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lL---aeGRIVNls  402 (488)
T 3ond_A          339 --MK----K-MKNNAIVCNIGHFD------NEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIIL---AEGRLMNLG  402 (488)
T ss_dssp             --HT----T-SCTTEEEEESSSTT------TTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEE---GGGSCHHHH
T ss_pred             --HH----h-cCCCeEEEEcCCCC------cccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHH---cCCcEEEEe
Confidence              11    1 26678888888642      24556666554       223332222111 2222233   238999999


Q ss_pred             ccccc
Q 023613          155 SVAGA  159 (280)
Q Consensus       155 S~~~~  159 (280)
                      |..+.
T Consensus       403 S~~G~  407 (488)
T 3ond_A          403 CATGH  407 (488)
T ss_dssp             HSCCS
T ss_pred             cCccc
Confidence            98765

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.68  E-value=6.3e-08  Score=85.28  Aligned_cols=107  Identities=19%  Similarity=0.265  Sum_probs=75.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+++++++|+|+ |+||+.+++.+...|++|++++|++++++...+....  .   +.+|.++.+++.+++.       +
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~--~---~~~~~~~~~~l~~~~~-------~  229 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG--R---VITLTATEANIKKSVQ-------H  229 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT--S---EEEEECCHHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc--e---EEEecCCHHHHHHHHh-------C
Confidence            578999999999 9999999999999999999999998877766554432  2   3456777777665543       7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      .|++|++++..... .                    +..+.+..++.|+  +++.||++++..
T Consensus       230 ~DvVi~~~g~~~~~-~--------------------~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          230 ADLLIGAVLVPGAK-A--------------------PKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             CSEEEECCC----------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             CCEEEECCCCCccc-c--------------------chhHHHHHHHhhc--CCCEEEEEecCC
Confidence            89999999864210 0                    1223456677774  468999998754

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.65  E-value=7.5e-08  Score=86.90  Aligned_cols=78  Identities=14%  Similarity=0.200  Sum_probs=62.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++|+++|+| +|++|+++++.|++.|++|++++|+.+..+++.+.+   ..+..+.+|+++.+++.++++       ++|
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~---~~~~~~~~Dv~d~~~l~~~l~-------~~D   70 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---QHSTPISLDVNDDAALDAEVA-------KHD   70 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC---TTEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc---CCceEEEeecCCHHHHHHHHc-------CCc
Confidence            478899998 799999999999999999999999987665544322   246678899999888766553       799


Q ss_pred             EEEECCCCC
Q 023613           97 IMVNNAGIS  105 (280)
Q Consensus        97 ~li~~ag~~  105 (280)
                      +|||+++..
T Consensus        71 vVIn~a~~~   79 (450)
T 1ff9_A           71 LVISLIPYT   79 (450)
T ss_dssp             EEEECCC--
T ss_pred             EEEECCccc
Confidence            999999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.63  E-value=6.2e-08  Score=84.02  Aligned_cols=79  Identities=19%  Similarity=0.235  Sum_probs=59.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+||++|||.++++.+...|++|++++++++.++.. +.+..  ..   .+|.++.+++.+.+.++..  +++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~--~~---~~d~~~~~~~~~~~~~~~~--~~~d  216 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGF--DA---AFNYKTVNSLEEALKKASP--DGYD  216 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTC--SE---EEETTSCSCHHHHHHHHCT--TCEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCC--cE---EEecCCHHHHHHHHHHHhC--CCCe
Confidence            589999999999999999999999999999999998877666 44432  21   2466653444444444332  5899


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|+|+|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999997

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.59  E-value=1.8e-08  Score=92.70  Aligned_cols=101  Identities=21%  Similarity=0.325  Sum_probs=67.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++||||+ |+|++++..|++.|++|++++|+.++.+++.+.+..  .+.    ++.+   +    +..  ..+.
T Consensus       361 ~l~~k~vlV~GaG-Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~--~~~----~~~d---l----~~~--~~~~  424 (523)
T 2o7s_A          361 PLASKTVVVIGAG-GAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG--KAL----SLTD---L----DNY--HPED  424 (523)
T ss_dssp             -----CEEEECCS-HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC---CE----ETTT---T----TTC----CC
T ss_pred             ccCCCEEEEECCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC--cee----eHHH---h----hhc--cccC
Confidence            5789999999994 999999999999999999999999888888777642  221    1211   1    100  1135


Q ss_pred             ccEEEECCCCCCCC---CCCCCCCCHHHHHHHhhhhhHhH
Q 023613           95 LDIMVNNAGISGAP---CPDIREADLSEFEKVFDINVKGV  131 (280)
Q Consensus        95 ~d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~  131 (280)
                      +|++|||+|+...+   ..++.+.+.++|...+++|+.+.
T Consensus       425 ~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          425 GMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             SEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             ceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            89999999985421   13455566777788888888765

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.58  E-value=5.7e-08  Score=77.76  Aligned_cols=103  Identities=18%  Similarity=0.253  Sum_probs=70.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+||++|||+++++.+...|++|++++|+++..+... .+.  ...   .+|..+.+..+.+.+...  .+++|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g--~~~---~~d~~~~~~~~~~~~~~~--~~~~D  109 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLG--VEY---VGDSRSVDFADEILELTD--GYGVD  109 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTC--CSE---EEETTCSTHHHHHHHHTT--TCCEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC--CCE---EeeCCcHHHHHHHHHHhC--CCCCe
Confidence            5899999999999999999999999999999999887665442 222  222   236666543333332221  13699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      ++|+|+|.  .                          ..+.+++.+.  .+|+++.+++..
T Consensus       110 ~vi~~~g~--~--------------------------~~~~~~~~l~--~~G~~v~~g~~~  140 (198)
T 1pqw_A          110 VVLNSLAG--E--------------------------AIQRGVQILA--PGGRFIELGKKD  140 (198)
T ss_dssp             EEEECCCT--H--------------------------HHHHHHHTEE--EEEEEEECSCGG
T ss_pred             EEEECCch--H--------------------------HHHHHHHHhc--cCCEEEEEcCCC
Confidence            99999962  0                          1345566664  358999988754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.53  E-value=1.5e-07  Score=81.30  Aligned_cols=104  Identities=15%  Similarity=0.166  Sum_probs=72.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+||++|||.++++.+...|++|++++|++++++.+.+ +.  ... .  +|..+.+..+++.+...  ..++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g--~~~-~--~~~~~~~~~~~~~~~~~--~~~~D  211 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AG--AWQ-V--INYREEDLVERLKEITG--GKKVR  211 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT--CSE-E--EETTTSCHHHHHHHHTT--TCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC--CCE-E--EECCCccHHHHHHHHhC--CCCce
Confidence            58999999999999999999999999999999999877666543 33  222 2  35555444333333221  13699


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      ++|+|+| . .                          ..+.+++.+.  .+|+++.+++..+
T Consensus       212 ~vi~~~g-~-~--------------------------~~~~~~~~l~--~~G~iv~~g~~~~  243 (327)
T 1qor_A          212 VVYDSVG-R-D--------------------------TWERSLDCLQ--RRGLMVSFGNSSG  243 (327)
T ss_dssp             EEEECSC-G-G--------------------------GHHHHHHTEE--EEEEEEECCCTTC
T ss_pred             EEEECCc-h-H--------------------------HHHHHHHHhc--CCCEEEEEecCCC
Confidence            9999998 2 1                          0245556664  3589999987543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.52  E-value=4.1e-07  Score=77.97  Aligned_cols=84  Identities=14%  Similarity=0.249  Sum_probs=62.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC---cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ---DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .++++|++||+|+ ||+|++++..|++.|+ +|+++.|+   .++.+++.+.+.......+...++.+.+++.+.+.   
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---
Confidence            3578999999998 6999999999999999 79999999   77777776665432122233446666555543333   


Q ss_pred             HHcCCccEEEECCCCC
Q 023613           90 EKFGTLDIMVNNAGIS  105 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~  105 (280)
                          ..|+|||+.+..
T Consensus       226 ----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ----ESVIFTNATGVG  237 (315)
T ss_dssp             ----TCSEEEECSSTT
T ss_pred             ----CCCEEEECccCC
Confidence                789999998764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.50  E-value=3.8e-07  Score=82.53  Aligned_cols=80  Identities=14%  Similarity=0.179  Sum_probs=63.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|+++|+|+ |++|++++..|++. |++|++++|+.++.+++.+. .   .+.++.+|+.+.+++.++++      
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~---~~~~~~~D~~d~~~l~~~l~------   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-S---GSKAISLDVTDDSALDKVLA------   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-G---TCEEEECCTTCHHHHHHHHH------
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-c---CCcEEEEecCCHHHHHHHHc------
Confidence            4578899999997 99999999999998 78899999998887776554 1   34567799999888766654      


Q ss_pred             CCccEEEECCCCC
Q 023613           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 ~~~d~li~~ag~~  105 (280)
                       ++|+|||+++..
T Consensus        88 -~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -DNDVVISLIPYT   99 (467)
T ss_dssp             -TSSEEEECSCGG
T ss_pred             -CCCEEEECCchh
Confidence             799999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.41  E-value=6.3e-07  Score=78.12  Aligned_cols=104  Identities=24%  Similarity=0.319  Sum_probs=74.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+|++++||.++++.+...|++|++++|+++.++.. +.+.  .. .  .+|.++.+++.+.+.++.+  +++|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~g--~~-~--~~d~~~~~~~~~~~~~~~~--~~~D  240 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIG--GE-V--FIDFTKEKDIVGAVLKATD--GGAH  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHTT--CC-E--EEETTTCSCHHHHHHHHHT--SCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHcC--Cc-e--EEecCccHhHHHHHHHHhC--CCCC
Confidence            589999999999999999999999999999999988877544 3443  22 1  2376654555555554433  3799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      ++|+++|..                           ..++.+++.+.  .+|+++.+++..
T Consensus       241 ~vi~~~g~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~  272 (347)
T 2hcy_A          241 GVINVSVSE---------------------------AAIEASTRYVR--ANGTTVLVGMPA  272 (347)
T ss_dssp             EEEECSSCH---------------------------HHHHHHTTSEE--EEEEEEECCCCT
T ss_pred             EEEECCCcH---------------------------HHHHHHHHHHh--cCCEEEEEeCCC
Confidence            999999731                           02355566663  358999987754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.40  E-value=4.2e-07  Score=68.39  Aligned_cols=77  Identities=18%  Similarity=0.279  Sum_probs=56.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++++++|+|+ |++|+.+++.|.+.|++|++++++++..+.+    ... ...++.+|.++.+.+.++      ..++
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~-~~~~~~~d~~~~~~l~~~------~~~~   70 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY-ATHAVIANATEENELLSL------GIRN   70 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT-CSEEEECCTTCHHHHHTT------TGGG
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh-CCEEEEeCCCCHHHHHhc------CCCC
Confidence            456788999998 9999999999999999999999987654432    211 234577899887655332      1347


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      .|++|++++
T Consensus        71 ~d~vi~~~~   79 (144)
T 2hmt_A           71 FEYVIVAIG   79 (144)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999986

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.39  E-value=1.6e-06  Score=65.23  Aligned_cols=76  Identities=16%  Similarity=0.061  Sum_probs=59.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ++.+.++|+|+ |.+|+.+++.|.++|++|++++++++..+.+.+.     .+.++.+|.++++.++++      ...+.
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~~------~~~~~   71 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYRSL------DLEGV   71 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHHHS------CCTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHHhC------CcccC
Confidence            34678999998 6799999999999999999999998877665442     356788999998876543      12478


Q ss_pred             cEEEECCC
Q 023613           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |.+|.+.+
T Consensus        72 d~vi~~~~   79 (141)
T 3llv_A           72 SAVLITGS   79 (141)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEecC
Confidence            99998775

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.38  E-value=7.7e-07  Score=74.90  Aligned_cols=77  Identities=10%  Similarity=0.144  Sum_probs=58.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.....+  ..+|+   +++       .+  +.
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~--~~~~~---~~~-------~~--~~  180 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSI--QALSM---DEL-------EG--HE  180 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSE--EECCS---GGG-------TT--CC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCe--eEecH---HHh-------cc--CC
Confidence            568999999998 69999999999999999999999998888877766432122  12333   111       11  58


Q ss_pred             ccEEEECCCCCC
Q 023613           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 ~d~li~~ag~~~  106 (280)
                      .|++||++|...
T Consensus       181 ~DivVn~t~~~~  192 (271)
T 1nyt_A          181 FDLIINATSSGI  192 (271)
T ss_dssp             CSEEEECCSCGG
T ss_pred             CCEEEECCCCCC
Confidence            999999999754

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.38  E-value=2.1e-07  Score=79.11  Aligned_cols=80  Identities=15%  Similarity=0.211  Sum_probs=58.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCC-CeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-DTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++|+|++ |+|+++++.|++.| +|++++|+.++.+++.+.+.... ....+.+|+.+.          .+.++
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            5789999999997 99999999999999 99999999887777766553210 000112344331          23457


Q ss_pred             CccEEEECCCCCC
Q 023613           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~~d~li~~ag~~~  106 (280)
                      ++|++|||+|...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999764

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.36  E-value=5e-07  Score=78.62  Aligned_cols=104  Identities=16%  Similarity=0.178  Sum_probs=72.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+||+|+||..+++.+...|++|+++++++++++.+.+.+..  .. .  +|..+.+++.+.+.++..  +++|
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~--~~-~--~d~~~~~~~~~~~~~~~~--~~~d  227 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF--DD-A--FNYKEESDLTAALKRCFP--NGID  227 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC--SE-E--EETTSCSCSHHHHHHHCT--TCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC--ce-E--EecCCHHHHHHHHHHHhC--CCCc
Confidence            589999999999999999999999999999999998877665534432  22 2  355543334333443322  4799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      ++|+|+|..                            .++.+++.+.  .+|+++.++...
T Consensus       228 ~vi~~~g~~----------------------------~~~~~~~~l~--~~G~~v~~G~~~  258 (345)
T 2j3h_A          228 IYFENVGGK----------------------------MLDAVLVNMN--MHGRIAVCGMIS  258 (345)
T ss_dssp             EEEESSCHH----------------------------HHHHHHTTEE--EEEEEEECCCGG
T ss_pred             EEEECCCHH----------------------------HHHHHHHHHh--cCCEEEEEcccc
Confidence            999999720                            1344555653  358999887644

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.34  E-value=8.9e-07  Score=76.69  Aligned_cols=80  Identities=19%  Similarity=0.202  Sum_probs=58.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+||++|||.++++.+...|++|++++|++++++.+.+ +.  ... .  +|..+.+..+++.+...  ..++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g--~~~-~--~d~~~~~~~~~i~~~~~--~~~~d  216 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LG--CHH-T--INYSTQDFAEVVREITG--GKGVD  216 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT--CSE-E--EETTTSCHHHHHHHHHT--TCCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--CCE-E--EECCCHHHHHHHHHHhC--CCCCe
Confidence            58999999999999999999999999999999999877766543 43  222 2  35555443333333221  13799


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|+|+|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.30  E-value=1e-06  Score=77.01  Aligned_cols=103  Identities=17%  Similarity=0.177  Sum_probs=71.3

Q ss_pred             CC--cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-
Q 023613           17 VG--RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-   92 (280)
Q Consensus        17 ~~--k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   92 (280)
                      .|  +++||+||++|||..+++.+...|+ +|+++++++++++.+.+.+..  ..   .+|..+.+..    +.+.+.. 
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~--~~---~~d~~~~~~~----~~~~~~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF--DA---AINYKKDNVA----EQLRESCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC--SE---EEETTTSCHH----HHHHHHCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC--ce---EEecCchHHH----HHHHHhcC
Confidence            47  9999999999999999999999999 999999998777666554442  21   2455553222    2233322 


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      +++|++|+|+|.  .                          .++.+++.+.  .+|+++.++....
T Consensus       229 ~~~d~vi~~~G~--~--------------------------~~~~~~~~l~--~~G~iv~~G~~~~  264 (357)
T 2zb4_A          229 AGVDVYFDNVGG--N--------------------------ISDTVISQMN--ENSHIILCGQISQ  264 (357)
T ss_dssp             TCEEEEEESCCH--H--------------------------HHHHHHHTEE--EEEEEEECCCGGG
T ss_pred             CCCCEEEECCCH--H--------------------------HHHHHHHHhc--cCcEEEEECCccc
Confidence            379999999972  0                          1334556653  3589999876543

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.30  E-value=1.5e-06  Score=75.92  Aligned_cols=77  Identities=14%  Similarity=0.202  Sum_probs=56.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|+++||+||+||||.++++.+...|++|+++++++++++.. +.+.  ... .  +|..+.+..+    .+.+..  ++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g--a~~-~--~d~~~~~~~~----~~~~~~~~~~  239 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNG--AHE-V--FNHREVNYID----KIKKYVGEKG  239 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--CSE-E--EETTSTTHHH----HHHHHHCTTC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHcC--CCE-E--EeCCCchHHH----HHHHHcCCCC
Confidence            589999999999999999999999999999999998877643 4443  221 2  3555543333    333332  27


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      +|++|+|+|
T Consensus       240 ~D~vi~~~G  248 (351)
T 1yb5_A          240 IDIIIEMLA  248 (351)
T ss_dssp             EEEEEESCH
T ss_pred             cEEEEECCC
Confidence            999999997

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.29  E-value=1.2e-06  Score=76.48  Aligned_cols=78  Identities=21%  Similarity=0.293  Sum_probs=57.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|+++||+||++|||.++++.+...|++|+++++++++++.+ +.+..  ..   .+|..+.+..+    .+.+..  ++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~--~~---~~~~~~~~~~~----~~~~~~~~~~  231 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGA--AA---GFNYKKEDFSE----ATLKFTKGAG  231 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTC--SE---EEETTTSCHHH----HHHHHTTTSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC--cE---EEecCChHHHH----HHHHHhcCCC
Confidence            589999999999999999999999999999999998877665 44432  21   23555543333    333332  37


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|+|+|.
T Consensus       232 ~d~vi~~~G~  241 (354)
T 2j8z_A          232 VNLILDCIGG  241 (354)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCc
Confidence            9999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.28  E-value=1.4e-06  Score=75.58  Aligned_cols=102  Identities=17%  Similarity=0.198  Sum_probs=72.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   95 (280)
                      .|+++||+||+|+||..+++.+...|++|+++++++++++.+.+.+..  .. .  .|..+.+..    +.+.+.. +++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~--~~-~--~~~~~~~~~----~~~~~~~~~~~  219 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF--DG-A--IDYKNEDLA----AGLKRECPKGI  219 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC--SE-E--EETTTSCHH----HHHHHHCTTCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC--CE-E--EECCCHHHH----HHHHHhcCCCc
Confidence            599999999999999999999999999999999998887766455542  22 2  344443322    2232222 479


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      |++|+|+|..                            .++.+++.+.  .+|+++.++...
T Consensus       220 d~vi~~~g~~----------------------------~~~~~~~~l~--~~G~iv~~G~~~  251 (336)
T 4b7c_A          220 DVFFDNVGGE----------------------------ILDTVLTRIA--FKARIVLCGAIS  251 (336)
T ss_dssp             EEEEESSCHH----------------------------HHHHHHTTEE--EEEEEEECCCGG
T ss_pred             eEEEECCCcc----------------------------hHHHHHHHHh--hCCEEEEEeecc
Confidence            9999999730                            1344555553  358999987655

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.28  E-value=5.9e-06  Score=74.46  Aligned_cols=109  Identities=23%  Similarity=0.328  Sum_probs=75.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEE--ecCCC---------CHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFC--HCDVT---------KEEDVCSAV   85 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~D~~---------~~~~~~~~~   85 (280)
                      .|+++||+||+|+||...++.+...|++|+++.+++++++.+ +++..  ...+.  ..|+.         +.+++.++.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGC--DLVINRAELGITDDIADDPRRVVETGRKLA  296 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTC--CCEEEHHHHTCCTTGGGCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC--CEEEecccccccccccccccccchhhhHHH
Confidence            589999999999999999999999999999999988877655 44442  22221  12221         234556667


Q ss_pred             HHHHHHcC-CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           86 DLTVEKFG-TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        86 ~~~~~~~~-~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      +.+.+..+ ++|++|+++|..                            .++.+++.+  +.+|+++.+++..+
T Consensus       297 ~~v~~~~g~g~Dvvid~~G~~----------------------------~~~~~~~~l--~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          297 KLVVEKAGREPDIVFEHTGRV----------------------------TFGLSVIVA--RRGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHSSCCSEEEECSCHH----------------------------HHHHHHHHS--CTTCEEEESCCTTC
T ss_pred             HHHHHHhCCCceEEEECCCch----------------------------HHHHHHHHH--hcCCEEEEEecCCC
Confidence            77776654 699999999731                            013445555  44699999986543

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.22  E-value=4.3e-06  Score=71.53  Aligned_cols=84  Identities=12%  Similarity=0.214  Sum_probs=59.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC---cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ---DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .++++|++||+|+ ||.|++++..|++.|+ +|.++.|+   .++.+++.+.+.......+...+..+.+...+.+    
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l----  218 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEAL----  218 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH----
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhc----
Confidence            3578999999998 8999999999999998 79999999   7777777666543212222334555543222222    


Q ss_pred             HHcCCccEEEECCCCC
Q 023613           90 EKFGTLDIMVNNAGIS  105 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~  105 (280)
                         ...|+|||+.+..
T Consensus       219 ---~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 ---ASADILTNGTKVG  231 (312)
T ss_dssp             ---HHCSEEEECSSTT
T ss_pred             ---cCceEEEECCcCC
Confidence               2679999998764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.21  E-value=3.6e-06  Score=73.16  Aligned_cols=102  Identities=16%  Similarity=0.218  Sum_probs=71.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|+++||+|+++++|..+++.+...|++|+++++++++++.+. .+.  ... +  +|..+.+ +   .+.+.+..  .+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g--a~~-~--~d~~~~~-~---~~~~~~~~~~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALG--ADE-T--VNYTHPD-W---PKEVRRLTGGKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHT--CSE-E--EETTSTT-H---HHHHHHHTTTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcC--CCE-E--EcCCccc-H---HHHHHHHhCCCC
Confidence            5899999999999999999999999999999999988776654 343  222 2  3555543 2   23333332  37


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      +|++|+++| . .                          ..+.+++.+.  ..|+++.+++...
T Consensus       236 ~d~vi~~~g-~-~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  269 (343)
T 2eih_A          236 ADKVVDHTG-A-L--------------------------YFEGVIKATA--NGGRIAIAGASSG  269 (343)
T ss_dssp             EEEEEESSC-S-S--------------------------SHHHHHHHEE--EEEEEEESSCCCS
T ss_pred             ceEEEECCC-H-H--------------------------HHHHHHHhhc--cCCEEEEEecCCC
Confidence            999999998 2 1                          0244555563  3589999887543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.15  E-value=4.9e-06  Score=72.43  Aligned_cols=78  Identities=15%  Similarity=0.265  Sum_probs=56.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      .|+++||+|++++||..+++.+... |++|+++++++++++.+ +++.  ....   .|..+.+..+    .+.+..  +
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g--~~~~---~~~~~~~~~~----~~~~~~~~~  239 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAG--ADYV---INASMQDPLA----EIRRITESK  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHT--CSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhC--CCEE---ecCCCccHHH----HHHHHhcCC
Confidence            5899999999999999999999999 99999999998877655 3343  2222   2444433222    222222  5


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|+++|.
T Consensus       240 ~~d~vi~~~g~  250 (347)
T 1jvb_A          240 GVDAVIDLNNS  250 (347)
T ss_dssp             CEEEEEESCCC
T ss_pred             CceEEEECCCC
Confidence            89999999984

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.13  E-value=1.1e-05  Score=69.66  Aligned_cols=151  Identities=13%  Similarity=0.055  Sum_probs=96.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecC----cchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA-------KVCIADVQ----DNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAV   85 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~   85 (280)
                      ..+++||||+|.+|..++..|+..|.       .|++.+++    +++++.....+... ..+.   .|+....+..   
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~---   78 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPM---   78 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcH---
Confidence            35799999999999999999999885       79999988    55444433333221 1111   1222212222   


Q ss_pred             HHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc-------
Q 023613           86 DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG-------  158 (280)
Q Consensus        86 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~-------  158 (280)
                          +.+.+.|+||+.||....+     ..+.   .+.+..|+.....+.+.+..+-  ..+++++++|.-..       
T Consensus        79 ----~al~~aD~Vi~~ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~  144 (329)
T 1b8p_A           79 ----TAFKDADVALLVGARPRGP-----GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAM  144 (329)
T ss_dssp             ----HHTTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHH
T ss_pred             ----HHhCCCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHH
Confidence                2234899999999975421     2233   4567899998888888887652  14578999886331       


Q ss_pred             -cc-cCCCCccchhhHHHHHHHHHHHHHHHCC
Q 023613          159 -AI-GGLGPHAYTGSKHAVLGLNKNVAAELGK  188 (280)
Q Consensus       159 -~~-~~~~~~~Y~~sK~al~~~~~~la~e~~~  188 (280)
                       .. +.|....|+.++.--..+...+++.+.-
T Consensus       145 ~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv  176 (329)
T 1b8p_A          145 KSAPSLPAKNFTAMLRLDHNRALSQIAAKTGK  176 (329)
T ss_dssp             HTCTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             HHcCCCCHHHEEEeecHHHHHHHHHHHHHhCc
Confidence             11 2233345777766566777788887753

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.09  E-value=9.2e-06  Score=68.63  Aligned_cols=80  Identities=16%  Similarity=0.229  Sum_probs=58.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+... ..+.+...+..+.   .+.+.      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh------
Confidence            578999999998 7999999999999999 6999999999888877766421 1222333444332   22222      


Q ss_pred             CCccEEEECCCCC
Q 023613           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 ~~~d~li~~ag~~  105 (280)
                       ..|+|||+....
T Consensus       194 -~~DiVInaTp~G  205 (283)
T 3jyo_A          194 -AADGVVNATPMG  205 (283)
T ss_dssp             -HSSEEEECSSTT
T ss_pred             -cCCEEEECCCCC
Confidence             679999998764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.08  E-value=1.2e-05  Score=70.42  Aligned_cols=100  Identities=15%  Similarity=0.183  Sum_probs=68.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++|+++||+|+ |++|..+++.+...|++|+++++++   ++.+. .+.+..    ..+  | .+ +-.+++. + . .
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~ga----~~v--~-~~-~~~~~~~-~-~-~  244 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEETKT----NYY--N-SS-NGYDKLK-D-S-V  244 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHHTC----EEE--E-CT-TCSHHHH-H-H-H
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHhCC----cee--c-hH-HHHHHHH-H-h-C
Confidence            355999999999 9999999999999999999999987   66543 344441    122  4 43 2122222 2 1 2


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHH-HHHHHhcccCCCceEEEEcccc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM-KHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~-~~~~~~l~~~~~~~iv~isS~~  157 (280)
                       +++|++|+++|...                           .+ +.+++.+.  .+|+++.++...
T Consensus       245 -~~~d~vid~~g~~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~  281 (366)
T 2cdc_A          245 -GKFDVIIDATGADV---------------------------NILGNVIPLLG--RNGVLGLFGFST  281 (366)
T ss_dssp             -CCEEEEEECCCCCT---------------------------HHHHHHGGGEE--EEEEEEECSCCC
T ss_pred             -CCCCEEEECCCChH---------------------------HHHHHHHHHHh--cCCEEEEEecCC
Confidence             68999999998521                           12 55666663  358999987643

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.08  E-value=4.6e-05  Score=66.28  Aligned_cols=79  Identities=10%  Similarity=0.122  Sum_probs=55.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      ++++||+||++++|...++.+...|++|+++++++++++.+. ++.  ... ++  |..+.+-.+++.+....  .++|+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~G--a~~-~~--~~~~~~~~~~v~~~~~~--~g~D~  236 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIG--AAH-VL--NEKAPDFEATLREVMKA--EQPRI  236 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHT--CSE-EE--ETTSTTHHHHHHHHHHH--HCCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC--CCE-EE--ECCcHHHHHHHHHHhcC--CCCcE
Confidence            389999999999999999988899999999999988776654 444  222 22  44443322222222211  27999


Q ss_pred             EEECCCC
Q 023613           98 MVNNAGI  104 (280)
Q Consensus        98 li~~ag~  104 (280)
                      +|+++|.
T Consensus       237 vid~~g~  243 (349)
T 3pi7_A          237 FLDAVTG  243 (349)
T ss_dssp             EEESSCH
T ss_pred             EEECCCC
Confidence            9999973

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.06  E-value=1e-05  Score=70.65  Aligned_cols=79  Identities=23%  Similarity=0.317  Sum_probs=57.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+||+++||..+++.+...|++|+++++++++++.+.+ +..  .. +  .|..+.+..+.+. ++.  .+++|
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa--~~-~--~~~~~~~~~~~~~-~~~--~~g~D  237 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LGA--KR-G--INYRSEDFAAVIK-AET--GQGVD  237 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTC--SE-E--EETTTSCHHHHHH-HHH--SSCEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCC--CE-E--EeCCchHHHHHHH-HHh--CCCce
Confidence            58999999999999999999999999999999999887765543 432  22 2  2444433322222 222  35899


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|+++|.
T Consensus       238 vvid~~g~  245 (353)
T 4dup_A          238 IILDMIGA  245 (353)
T ss_dssp             EEEESCCG
T ss_pred             EEEECCCH
Confidence            99999983

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.05  E-value=3e-05  Score=68.31  Aligned_cols=106  Identities=16%  Similarity=0.179  Sum_probs=73.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+.+++++|+|+ |+||+.+++.+...|++|++.+|+.++++.+.+....  .+.   ++..+.+++.+++.       +
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~--~~~---~~~~~~~~l~~~l~-------~  231 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG--RIH---TRYSSAYELEGAVK-------R  231 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT--SSE---EEECCHHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC--eeE---eccCCHHHHHHHHc-------C
Confidence            578999999998 9999999999999999999999999887766554442  221   23344555544332       6


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccc
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV  156 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~  156 (280)
                      .|++|++++....      +..               ..+.+..++.|+  +++.||++++.
T Consensus       232 aDvVi~~~~~p~~------~t~---------------~li~~~~l~~mk--~g~~iV~va~~  270 (377)
T 2vhw_A          232 ADLVIGAVLVPGA------KAP---------------KLVSNSLVAHMK--PGAVLVDIAID  270 (377)
T ss_dssp             CSEEEECCCCTTS------CCC---------------CCBCHHHHTTSC--TTCEEEEGGGG
T ss_pred             CCEEEECCCcCCC------CCc---------------ceecHHHHhcCC--CCcEEEEEecC
Confidence            8999999875321      000               111344556663  46889999854

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.05  E-value=1.2e-05  Score=67.64  Aligned_cols=77  Identities=10%  Similarity=0.119  Sum_probs=57.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.+.....+..  +|+   +++.       +  +.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~-------~--~~  180 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIP-------L--QT  180 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCC-------C--SC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhc-------c--CC
Confidence            568999999998 7999999999999999999999999888888776643112222  232   1110       1  48


Q ss_pred             ccEEEECCCCCC
Q 023613           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 ~d~li~~ag~~~  106 (280)
                      .|+|||+++...
T Consensus       181 ~DivIn~t~~~~  192 (272)
T 1p77_A          181 YDLVINATSAGL  192 (272)
T ss_dssp             CSEEEECCCC--
T ss_pred             CCEEEECCCCCC
Confidence            999999998753

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.02  E-value=4.2e-05  Score=58.26  Aligned_cols=77  Identities=13%  Similarity=0.112  Sum_probs=57.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+.++|.|+ |.+|+.+++.|.+.|+.|+++++++ +..+.+.+...  ..+.++..|.++++.+.+.      ...+.|
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKA------GIDRCR   73 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHH------TTTTCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc--CCCeEEEcCCCCHHHHHHc------ChhhCC
Confidence            566888886 9999999999999999999999974 54444444333  2467888999998765432      124789


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (153)
T 1id1_A           74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEecC
Confidence            9988874

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.01  E-value=0.00012  Score=63.12  Aligned_cols=116  Identities=18%  Similarity=0.229  Sum_probs=72.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ..+++||||+|.+|..++..|+++|  ..|++++++++ .....+..+......+ .. +.+..+..+.       +.+.
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~v-~~-~~~t~d~~~a-------l~ga   77 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAVV-RG-FLGQQQLEAA-------LTGM   77 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCEE-EE-EESHHHHHHH-------HTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccceE-EE-EeCCCCHHHH-------cCCC
Confidence            3579999999999999999999988  77999998765 2222222221111111 11 2223333322       2489


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      |++|+++|....+     ..+.   .+.+..|+.....+.+.+..+   ..++.|+++|
T Consensus        78 DvVi~~ag~~~~~-----g~~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~S  125 (326)
T 1smk_A           78 DLIIVPAGVPRKP-----GMTR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLIS  125 (326)
T ss_dssp             SEEEECCCCCCCS-----SCCC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECC
T ss_pred             CEEEEcCCcCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEEC
Confidence            9999999975431     1222   245788999888888888765   2335555543

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.00  E-value=1.6e-05  Score=67.73  Aligned_cols=78  Identities=13%  Similarity=0.216  Sum_probs=58.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.+..... .++     +.++       +.+...
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~~~-----~~~~-------~~~~~~  203 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-AYF-----SLAE-------AETRLA  203 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-CEE-----CHHH-------HHHTGG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-cee-----eHHH-------HHhhhc
Confidence            578999999998 7999999999999998 899999999988888877653211 111     2222       223335


Q ss_pred             CccEEEECCCCCC
Q 023613           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~~d~li~~ag~~~  106 (280)
                      ..|+|||+.+...
T Consensus       204 ~aDivIn~t~~~~  216 (297)
T 2egg_A          204 EYDIIINTTSVGM  216 (297)
T ss_dssp             GCSEEEECSCTTC
T ss_pred             cCCEEEECCCCCC
Confidence            8999999998754

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.97  E-value=1e-05  Score=69.66  Aligned_cols=102  Identities=17%  Similarity=0.221  Sum_probs=70.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|+++||+||+|++|..+++.+...|++|+++++++++++.+. ++.  ... +  .|..+.+.    .+.+.+..  .+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~G--a~~-~--~~~~~~~~----~~~~~~~~~~~g  209 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALG--AWE-T--IDYSHEDV----AKRVLELTDGKK  209 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHT--CSE-E--EETTTSCH----HHHHHHHTTTCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC--CCE-E--EeCCCccH----HHHHHHHhCCCC
Confidence            5899999999999999999999999999999999988776554 343  222 2  24444332    33333333  37


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      +|++|+++|..                            ..+.+++.+.  .+|+++.++...+
T Consensus       210 ~Dvvid~~g~~----------------------------~~~~~~~~l~--~~G~iv~~g~~~~  243 (325)
T 3jyn_A          210 CPVVYDGVGQD----------------------------TWLTSLDSVA--PRGLVVSFGNASG  243 (325)
T ss_dssp             EEEEEESSCGG----------------------------GHHHHHTTEE--EEEEEEECCCTTC
T ss_pred             ceEEEECCChH----------------------------HHHHHHHHhc--CCCEEEEEecCCC
Confidence            99999999841                            1234455553  3689999886543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.96  E-value=5.1e-05  Score=56.45  Aligned_cols=75  Identities=17%  Similarity=0.358  Sum_probs=56.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      ++.++|+|+ |.+|+.+++.|.+.|++|++++|+++..+.+.+..    .+.++..|..+.+.+.+.      ...+.|+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l~~~------~~~~~d~   72 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLEDA------GIEDADM   72 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHHHT------TTTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHHHHc------CcccCCE
Confidence            457889987 99999999999999999999999887766654432    244667888887654321      1247899


Q ss_pred             EEECCC
Q 023613           98 MVNNAG  103 (280)
Q Consensus        98 li~~ag  103 (280)
                      +|.+.+
T Consensus        73 vi~~~~   78 (140)
T 1lss_A           73 YIAVTG   78 (140)
T ss_dssp             EEECCS
T ss_pred             EEEeeC
Confidence            999974

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.95  E-value=1.3e-05  Score=69.57  Aligned_cols=78  Identities=14%  Similarity=0.152  Sum_probs=56.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|+++||+|+++++|..+++.+...|++|+++++++++++.+.+ +..  +. +  .|..+.+.    .+.+.+..  .+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga--~~-~--~~~~~~~~----~~~~~~~~~~~g  213 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGA--AY-V--IDTSTAPL----YETVMELTNGIG  213 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTC--SE-E--EETTTSCH----HHHHHHHTTTSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCC--cE-E--EeCCcccH----HHHHHHHhCCCC
Confidence            58999999999999999999888899999999999887766544 432  22 2  24444322    23333332  37


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|+++|.
T Consensus       214 ~Dvvid~~g~  223 (340)
T 3gms_A          214 ADAAIDSIGG  223 (340)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.95  E-value=1.1e-05  Score=69.86  Aligned_cols=101  Identities=17%  Similarity=0.248  Sum_probs=69.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|+++||+||+++||..+++.+...|++|+++++++++++.. +++.  ... +  .|..+.+.    .+.+.+..  .+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g--a~~-~--~~~~~~~~----~~~~~~~~~~~g  217 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEYG--AEY-L--INASKEDI----LRQVLKFTNGKG  217 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--CSE-E--EETTTSCH----HHHHHHHTTTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcC--CcE-E--EeCCCchH----HHHHHHHhCCCC
Confidence            589999999999999999999999999999999988877644 4444  222 2  24444322    33333332  36


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      +|++|+++|..                            ..+.+++.+.  .+|+++.++...
T Consensus       218 ~D~vid~~g~~----------------------------~~~~~~~~l~--~~G~iv~~G~~~  250 (334)
T 3qwb_A          218 VDASFDSVGKD----------------------------TFEISLAALK--RKGVFVSFGNAS  250 (334)
T ss_dssp             EEEEEECCGGG----------------------------GHHHHHHHEE--EEEEEEECCCTT
T ss_pred             ceEEEECCChH----------------------------HHHHHHHHhc--cCCEEEEEcCCC
Confidence            99999999841                            1234455553  458999987654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.93  E-value=4.4e-05  Score=66.86  Aligned_cols=75  Identities=23%  Similarity=0.387  Sum_probs=56.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+|+ |++|..+++.+...|++|+++++++++.+...+.+..  +. +  .|..+.+.+.       +..+++|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa--~~-v--~~~~~~~~~~-------~~~~~~D  253 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA--DS-F--LVSRDQEQMQ-------AAAGTLD  253 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC--SE-E--EETTCHHHHH-------HTTTCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC--ce-E--EeccCHHHHH-------HhhCCCC
Confidence            6899999996 9999999999989999999999998887765545542  22 2  3555544332       2235899


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|+++|.
T Consensus       254 ~vid~~g~  261 (366)
T 1yqd_A          254 GIIDTVSA  261 (366)
T ss_dssp             EEEECCSS
T ss_pred             EEEECCCc
Confidence            99999985

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.92  E-value=7.6e-05  Score=64.74  Aligned_cols=77  Identities=26%  Similarity=0.373  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-C-C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-T   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~-~   94 (280)
                      .|+++||+||+|+||..+++.+...|++|+++++++++++.+.+ +..  . .++..+    +++   .+.+.+.. + +
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga--~-~v~~~~----~~~---~~~v~~~~~~~g  227 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGA--D-IVLPLE----EGW---AKAVREATGGAG  227 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTC--S-EEEESS----TTH---HHHHHHHTTTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCC--c-EEecCc----hhH---HHHHHHHhCCCC
Confidence            58999999999999999999999999999999999887765443 432  2 223222    222   33444443 2 6


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|+++|.
T Consensus       228 ~Dvvid~~g~  237 (342)
T 4eye_A          228 VDMVVDPIGG  237 (342)
T ss_dssp             EEEEEESCC-
T ss_pred             ceEEEECCch
Confidence            9999999984

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.90  E-value=2.7e-05  Score=70.38  Aligned_cols=84  Identities=17%  Similarity=0.224  Sum_probs=63.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEe--cC--------CCCHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH--CD--------VTKEEDVCSAVD   86 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~D--------~~~~~~~~~~~~   86 (280)
                      .|++|||+||+|++|...++.+...|++|+++.+++++++.+ +.+..  ...+-.  .|        ..+.++++++.+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa--~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~  304 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGA--EAIIDRNAEGYRFWKDENTQDPKEWKRFGK  304 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTC--CEEEETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCC--cEEEecCcCcccccccccccchHHHHHHHH
Confidence            589999999999999999998888999999999888777655 44442  211111  12        245677778888


Q ss_pred             HHHHHcC--CccEEEECCC
Q 023613           87 LTVEKFG--TLDIMVNNAG  103 (280)
Q Consensus        87 ~~~~~~~--~~d~li~~ag  103 (280)
                      .+++..+  ++|++|.++|
T Consensus       305 ~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          305 RIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHhCCCCCcEEEEcCC
Confidence            8887653  7999999997

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.87  E-value=5.5e-05  Score=63.78  Aligned_cols=75  Identities=12%  Similarity=0.223  Sum_probs=57.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.++.|+.++.+++.+.+.....+.....+  +   +          ..
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~--~---l----------~~  186 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE--Q---L----------KQ  186 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG--G---C----------CS
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH--H---h----------cC
Confidence            578999999998 6999999999999996 8999999999888888776532233333221  1   1          03


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      ..|+|||+.+..
T Consensus       187 ~aDiIInaTp~g  198 (281)
T 3o8q_A          187 SYDVIINSTSAS  198 (281)
T ss_dssp             CEEEEEECSCCC
T ss_pred             CCCEEEEcCcCC
Confidence            789999998754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.86  E-value=5.3e-05  Score=63.56  Aligned_cols=75  Identities=20%  Similarity=0.235  Sum_probs=58.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.+.. ..+....  +.+   +.       .  .
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~~~~~~~--~~~---l~-------~--~  180 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-SRLRISR--YEA---LE-------G--Q  180 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-TTEEEEC--SGG---GT-------T--C
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-CCeeEee--HHH---hc-------c--c
Confidence            578999999998 6999999999999996 899999999999988888764 3333332  221   10       1  4


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      ..|+|||+.+..
T Consensus       181 ~~DivInaTp~g  192 (272)
T 3pwz_A          181 SFDIVVNATSAS  192 (272)
T ss_dssp             CCSEEEECSSGG
T ss_pred             CCCEEEECCCCC
Confidence            789999997654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.85  E-value=4e-05  Score=58.57  Aligned_cols=79  Identities=15%  Similarity=0.189  Sum_probs=56.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      -+..++.++|.|+ |.+|..+++.|.+.|++|++++|+++..+.+    .......++..|..+.+.+.+.      ...
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~----~~~~g~~~~~~d~~~~~~l~~~------~~~   83 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRL----NSEFSGFTVVGDAAEFETLKEC------GME   83 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGS----CTTCCSEEEESCTTSHHHHHTT------TGG
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----HhcCCCcEEEecCCCHHHHHHc------Ccc
Confidence            3566889999996 9999999999999999999999998765432    2112344566888876543221      124


Q ss_pred             CccEEEECCC
Q 023613           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~~d~li~~ag  103 (280)
                      +.|++|.+.+
T Consensus        84 ~ad~Vi~~~~   93 (155)
T 2g1u_A           84 KADMVFAFTN   93 (155)
T ss_dssp             GCSEEEECSS
T ss_pred             cCCEEEEEeC
Confidence            6899999875

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.82  E-value=6e-05  Score=65.95  Aligned_cols=78  Identities=17%  Similarity=0.232  Sum_probs=57.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+++++++|+|+ |++|+++++.+...|++|++++|++++++.+.+....  .+..+   ..+.+++.+.+       .+
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~--~~~~~---~~~~~~~~~~~-------~~  230 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS--RVELL---YSNSAEIETAV-------AE  230 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GSEEE---ECCHHHHHHHH-------HT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc--eeEee---eCCHHHHHHHH-------cC
Confidence            367899999999 9999999999999999999999999887776554331  22121   22344433222       27


Q ss_pred             ccEEEECCCCC
Q 023613           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 ~d~li~~ag~~  105 (280)
                      .|++|++++..
T Consensus       231 ~DvVI~~~~~~  241 (361)
T 1pjc_A          231 ADLLIGAVLVP  241 (361)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEECCCcC
Confidence            99999999864

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.82  E-value=0.00023  Score=62.19  Aligned_cols=81  Identities=21%  Similarity=0.267  Sum_probs=58.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      .|+++||.|+ |++|...++.....|++ |+++++++++++.+.+. .  ..+.....|-.+.+++   .+.+++..  .
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~--~~~~~~~~~~~~~~~~---~~~v~~~t~g~  251 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C--PEVVTHKVERLSAEES---AKKIVESFGGI  251 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C--TTCEEEECCSCCHHHH---HHHHHHHTSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c--hhcccccccccchHHH---HHHHHHHhCCC
Confidence            5899999998 99999999888888998 89999998887765544 3  2333444554555554   34444443  3


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       252 g~Dvvid~~g~  262 (363)
T 3m6i_A          252 EPAVALECTGV  262 (363)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999973

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.79  E-value=7.2e-05  Score=65.52  Aligned_cols=73  Identities=15%  Similarity=0.164  Sum_probs=58.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .++|+|.|| |++|+.+++.|++. ..|.+++++.+.++++.+      ....+.+|+.|.+++.++++       +.|+
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~~-~~v~~~~~~~~~~~~~~~------~~~~~~~d~~d~~~l~~~~~-------~~Dv   80 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKE------FATPLKVDASNFDKLVEVMK-------EFEL   80 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTT------TSEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             ccEEEEECC-CHHHHHHHHHHhcC-CCeEEEEcCHHHHHHHhc------cCCcEEEecCCHHHHHHHHh-------CCCE
Confidence            446899998 99999999999764 789999999887766532      34567899999988776665       7899


Q ss_pred             EEECCCCC
Q 023613           98 MVNNAGIS  105 (280)
Q Consensus        98 li~~ag~~  105 (280)
                      ||++++..
T Consensus        81 Vi~~~p~~   88 (365)
T 3abi_A           81 VIGALPGF   88 (365)
T ss_dssp             EEECCCGG
T ss_pred             EEEecCCc
Confidence            99998743

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.78  E-value=3e-05  Score=66.01  Aligned_cols=38  Identities=24%  Similarity=0.272  Sum_probs=32.2

Q ss_pred             ccCCcE-EEEEcCC------------------ChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           15 RLVGRV-ALITGGA------------------TGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        15 ~l~~k~-vlItGa~------------------~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      ++.||+ ||||+|.                  |-.|.++|+++++.|+.|+++.+..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            478888 9999554                  4499999999999999999988753

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.70  E-value=0.00015  Score=62.81  Aligned_cols=101  Identities=22%  Similarity=0.248  Sum_probs=69.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+|+ +++|..+++.+...|++|+++++++++++.+. .+..  .. +  +|..+.+ +.   +.+.+..+++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa--~~-~--~d~~~~~-~~---~~~~~~~~~~d  232 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGA--DL-V--VNPLKED-AA---KFMKEKVGGVH  232 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTC--SE-E--ECTTTSC-HH---HHHHHHHSSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCC--CE-E--ecCCCcc-HH---HHHHHHhCCCC
Confidence            5899999999 88999999999999999999999988776553 3432  21 2  3655432 22   22222226899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      ++|+++|...                           .++.+++.+.  ..|+++.+++..
T Consensus       233 ~vid~~g~~~---------------------------~~~~~~~~l~--~~G~~v~~g~~~  264 (339)
T 1rjw_A          233 AAVVTAVSKP---------------------------AFQSAYNSIR--RGGACVLVGLPP  264 (339)
T ss_dssp             EEEESSCCHH---------------------------HHHHHHHHEE--EEEEEEECCCCS
T ss_pred             EEEECCCCHH---------------------------HHHHHHHHhh--cCCEEEEecccC
Confidence            9999997410                           2345556663  358999887654

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.69  E-value=0.0001  Score=64.40  Aligned_cols=102  Identities=24%  Similarity=0.303  Sum_probs=69.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   95 (280)
                      .|+++||+||+|++|..+++.+...|++|+++++++++++.+. .+.  ... ++  |..+. ++.   +.+.+.. +++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~G--a~~-~~--~~~~~-~~~---~~~~~~~~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLG--CDR-PI--NYKTE-PVG---TVLKQEYPEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTT--CSE-EE--ETTTS-CHH---HHHHHHCTTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcC--CcE-EE--ecCCh-hHH---HHHHHhcCCCC
Confidence            5899999999999999999999999999999999987766554 343  222 22  33332 222   2222222 479


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      |++|+++|..                            .++.+++.+..  +|+++.+++..+
T Consensus       233 D~vid~~g~~----------------------------~~~~~~~~l~~--~G~iv~~g~~~~  265 (362)
T 2c0c_A          233 DVVYESVGGA----------------------------MFDLAVDALAT--KGRLIVIGFISG  265 (362)
T ss_dssp             EEEEECSCTH----------------------------HHHHHHHHEEE--EEEEEECCCGGG
T ss_pred             CEEEECCCHH----------------------------HHHHHHHHHhc--CCEEEEEeCCCC
Confidence            9999999720                            12345556543  589999887653

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.69  E-value=2.9e-05  Score=66.56  Aligned_cols=145  Identities=15%  Similarity=0.135  Sum_probs=87.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEec--CcchHHHHHHHh----CCC-CCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGA--KVCIADV--QDNLGQQVCQSL----GGE-PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~--~V~~~~r--~~~~~~~~~~~~----~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++||||+|.+|..++..|+..|.  .+.++++  ++++++.....+    ... .++.+...|  |  +       +.+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~-------l~~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--E-------NLR   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--T-------CGG
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--c-------hHH
Confidence            589999999999999999998874  4888888  654333211111    111 122222211  0  0       111


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc--------ccC
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA--------IGG  162 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~--------~~~  162 (280)
                      .+.+.|++|+.||....+     ..+.   .+.+..|+.....+.+.+..+   . ++.++++|.....        .+.
T Consensus        71 al~gaD~Vi~~Ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~---~-~~~vlv~SNPv~~~t~~~~k~~~~  138 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE-----GMSR---MDLAKTNAKIVGKYAKKIAEI---C-DTKIFVITNPVDVMTYKALVDSKF  138 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---C-CCEEEECSSSHHHHHHHHHHHHCC
T ss_pred             HhCCCCEEEECCCCCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHHh---C-CeEEEEecCcHHHHHHHHHHhhCc
Confidence            235899999999975421     2232   456899999999988888775   2 3555555432221        123


Q ss_pred             CCCccchh-hHHHHHHHHHHHHHHHC
Q 023613          163 LGPHAYTG-SKHAVLGLNKNVAAELG  187 (280)
Q Consensus       163 ~~~~~Y~~-sK~al~~~~~~la~e~~  187 (280)
                      |..-.++. ...--..+...+++.+.
T Consensus       139 p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          139 ERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             ChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            44456666 55446667777777764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.68  E-value=9.6e-05  Score=57.96  Aligned_cols=78  Identities=14%  Similarity=0.063  Sum_probs=57.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++.++.++|.| .|.+|..+++.|.+. |+.|++++++++..+.+.+ .    .+.++..|.++++.+.++     ....
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~----g~~~~~gd~~~~~~l~~~-----~~~~  104 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-E----GRNVISGDATDPDFWERI-----LDTG  104 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-T----TCCEEECCTTCHHHHHTB-----CSCC
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-C----CCCEEEcCCCCHHHHHhc-----cCCC
Confidence            45677888998 599999999999999 9999999999887766543 1    234567899887654321     0124


Q ss_pred             CccEEEECCC
Q 023613           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~~d~li~~ag  103 (280)
                      +.|++|.+.+
T Consensus       105 ~ad~vi~~~~  114 (183)
T 3c85_A          105 HVKLVLLAMP  114 (183)
T ss_dssp             CCCEEEECCS
T ss_pred             CCCEEEEeCC
Confidence            7899998764

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.63  E-value=0.00018  Score=62.42  Aligned_cols=101  Identities=18%  Similarity=0.316  Sum_probs=68.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+. .+..  + .+  .|..+.+ +   .+.+.+..  .
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga--~-~~--~~~~~~~-~---~~~v~~~~~g~  235 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGA--D-YV--INPFEED-V---VKEVMDITDGN  235 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTC--S-EE--ECTTTSC-H---HHHHHHHTTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCC--C-EE--ECCCCcC-H---HHHHHHHcCCC
Confidence            6899999999 9999999999888999 8999999987766543 4442  2 12  2444322 2   33333332  2


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      ++|++|+++|..                           ..++.+++.+.  ..|+++.+++..
T Consensus       236 g~D~vid~~g~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~  270 (348)
T 2d8a_A          236 GVDVFLEFSGAP---------------------------KALEQGLQAVT--PAGRVSLLGLYP  270 (348)
T ss_dssp             CEEEEEECSCCH---------------------------HHHHHHHHHEE--EEEEEEECCCCS
T ss_pred             CCCEEEECCCCH---------------------------HHHHHHHHHHh--cCCEEEEEccCC
Confidence            699999999731                           12345566664  358999988654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.62  E-value=0.00011  Score=62.55  Aligned_cols=74  Identities=18%  Similarity=0.235  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+|++|++|..+++.+...|++|+++++++++++... .+.  ... +  .|..+.++.   .+.+    +++|
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g--a~~-~--~~~~~~~~~---~~~~----~~~d  191 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALG--AEE-A--ATYAEVPER---AKAW----GGLD  191 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTT--CSE-E--EEGGGHHHH---HHHT----TSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcC--CCE-E--EECCcchhH---HHHh----cCce
Confidence            5899999999999999999999999999999999888776653 343  221 2  244431222   2222    5899


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|+ +|.
T Consensus       192 ~vid-~g~  198 (302)
T 1iz0_A          192 LVLE-VRG  198 (302)
T ss_dssp             EEEE-CSC
T ss_pred             EEEE-CCH
Confidence            9999 874

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.61  E-value=0.00066  Score=57.81  Aligned_cols=109  Identities=13%  Similarity=0.075  Sum_probs=69.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEec--CcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGA--KVCIADV--QDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~--~V~~~~r--~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +++||||+|.+|..++..|+..|.  .+++.++  ++++++.....+..    ...+.+.. +  +.+           .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence            589999999999999999998875  5888888  66544332222211    12233322 2  211           2


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEE
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISI  153 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~i  153 (280)
                      +.+.|++|+.||....+     ..+.   .+.+..|+.....+.+.+..+   ..++.++++
T Consensus        68 ~~~aDvVi~~ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~---~p~~~viv~  118 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP-----GQTR---IDLAGDNAPIMEDIQSSLDEH---NDDYISLTT  118 (303)
T ss_dssp             GTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHTT---CSCCEEEEC
T ss_pred             hCCCCEEEEcCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEe
Confidence            34899999999975431     2233   345888998888888877654   234555544

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.60  E-value=0.00023  Score=61.69  Aligned_cols=77  Identities=16%  Similarity=0.249  Sum_probs=55.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   95 (280)
                      .|+++||+||+|++|...++.+...|++|+++++++++++.+.+ +..  + .++  |..+  +.   .+.+.+.. +++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa--~-~vi--~~~~--~~---~~~~~~~~~~g~  218 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGA--D-IVL--NHKE--SL---LNQFKTQGIELV  218 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTC--S-EEE--CTTS--CH---HHHHHHHTCCCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCC--c-EEE--ECCc--cH---HHHHHHhCCCCc
Confidence            69999999999999999999998999999999998887665544 442  2 122  3332  22   33333333 479


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|+++|.
T Consensus       219 Dvv~d~~g~  227 (346)
T 3fbg_A          219 DYVFCTFNT  227 (346)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCc
Confidence            999999873

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.60  E-value=0.00046  Score=51.62  Aligned_cols=73  Identities=10%  Similarity=0.046  Sum_probs=56.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +.++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+     ..+.++..|.++++.+.++      ...+.|.+
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-----~g~~~i~gd~~~~~~l~~a------~i~~ad~v   75 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-----RGVRAVLGNAANEEIMQLA------HLECAKWL   75 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----TTCEEEESCTTSHHHHHHT------TGGGCSEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----cCCCEEECCCCCHHHHHhc------CcccCCEE
Confidence            45777786 889999999999999999999999988776654     2456788999998765432      12367888


Q ss_pred             EECCC
Q 023613           99 VNNAG  103 (280)
Q Consensus        99 i~~ag  103 (280)
                      |.+.+
T Consensus        76 i~~~~   80 (140)
T 3fwz_A           76 ILTIP   80 (140)
T ss_dssp             EECCS
T ss_pred             EEECC
Confidence            88774

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.57  E-value=0.00017  Score=62.50  Aligned_cols=76  Identities=22%  Similarity=0.351  Sum_probs=51.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+||+|++|...++.+...|++|+++ +++++++.+ +++..  ..    +| .+.+ ..+.+.+... ..++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~lGa--~~----i~-~~~~-~~~~~~~~~~-~~g~D  218 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDLGA--TP----ID-ASRE-PEDYAAEHTA-GQGFD  218 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHHTS--EE----EE-TTSC-HHHHHHHHHT-TSCEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHcCC--CE----ec-cCCC-HHHHHHHHhc-CCCce
Confidence            58999999999999999999999999999998 776665543 44442  22    23 2222 2222222211 13799


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|+++|
T Consensus       219 ~vid~~g  225 (343)
T 3gaz_A          219 LVYDTLG  225 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999997

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.54  E-value=0.00031  Score=58.12  Aligned_cols=80  Identities=13%  Similarity=0.212  Sum_probs=57.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc-------------------chHHHHHHHh---CCCCCeEEE
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD-------------------NLGQQVCQSL---GGEPDTFFC   71 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~---~~~~~~~~~   71 (280)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                   ++.+.+.+.+   ....++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            578999999996 6999999999999997 689999886                   5665555544   333445556


Q ss_pred             ecCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023613           72 HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        72 ~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag  103 (280)
                      ..++. .+.+.+++       .+.|+||.+..
T Consensus       107 ~~~~~-~~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLD-DAELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             CSCCC-HHHHHHHH-------HTSSEEEECCS
T ss_pred             eccCC-HhHHHHHH-------hCCCEEEEeCC
Confidence            66665 33443333       37899998864

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.54  E-value=5.4e-05  Score=57.05  Aligned_cols=72  Identities=13%  Similarity=0.149  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+++++|.|+ |++|+.+++.|.+.|++|++.+|+.+..+++.+.+..    ...  +..+.+   +.++       ..|
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~----~~~--~~~~~~---~~~~-------~~D   82 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEY----EYV--LINDID---SLIK-------NND   82 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTC----EEE--ECSCHH---HHHH-------TCS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCC----ceE--eecCHH---HHhc-------CCC
Confidence            3899999996 9999999999999999999999999988887776651    121  223322   2222       789


Q ss_pred             EEEECCCCC
Q 023613           97 IMVNNAGIS  105 (280)
Q Consensus        97 ~li~~ag~~  105 (280)
                      ++|++.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999998754

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.53  E-value=0.00034  Score=61.13  Aligned_cols=76  Identities=21%  Similarity=0.275  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-C-C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-T   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~-~   94 (280)
                      .|+++||+| +|++|...++.+...|++|+++++++++++.+ +++..  .. ++  | .+.+++   .+.+.+.. + +
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa--~~-vi--~-~~~~~~---~~~v~~~~~g~g  257 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGA--DH-GI--N-RLEEDW---VERVYALTGDRG  257 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTC--SE-EE--E-TTTSCH---HHHHHHHHTTCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCC--CE-EE--c-CCcccH---HHHHHHHhCCCC
Confidence            589999999 89999999998888999999999998877664 44442  22 22  3 222222   22333322 2 7


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      +|++|.++|
T Consensus       258 ~D~vid~~g  266 (363)
T 3uog_A          258 ADHILEIAG  266 (363)
T ss_dssp             EEEEEEETT
T ss_pred             ceEEEECCC
Confidence            999999998

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.51  E-value=0.0016  Score=54.86  Aligned_cols=41  Identities=15%  Similarity=0.099  Sum_probs=34.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   60 (280)
                      +++.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            56777775 789999999999999999999999887766544

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.49  E-value=0.00033  Score=62.17  Aligned_cols=74  Identities=16%  Similarity=0.367  Sum_probs=55.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++.+.++.  .  .  .+..   ++.+.+       .
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~--~--~--~~~~---~l~~~l-------~  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG--E--A--VRFD---ELVDHL-------A  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC--E--E--CCGG---GHHHHH-------H
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC--c--e--ecHH---hHHHHh-------c
Confidence            478999999998 9999999999999998 899999998887666666542  1  1  2222   222222       3


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      +.|+||++.|..
T Consensus       227 ~aDvVi~at~~~  238 (404)
T 1gpj_A          227 RSDVVVSATAAP  238 (404)
T ss_dssp             TCSEEEECCSSS
T ss_pred             CCCEEEEccCCC
Confidence            789999998643

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.47  E-value=0.00052  Score=59.62  Aligned_cols=81  Identities=19%  Similarity=0.177  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHH-HcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVE-KFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~-~~~~   94 (280)
                      .|+++||+|+ |++|...++.+...|++|+++++++++++.+ +++..  + .++  |..+ .+..+++.+...+ ..++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa--~-~~~--~~~~~~~~~~~i~~~~~~~~g~g  240 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNCGA--D-VTL--VVDPAKEEESSIIERIRSAIGDL  240 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTC--S-EEE--ECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCC--C-EEE--cCcccccHHHHHHHHhccccCCC
Confidence            5899999997 8999999998888999999999988776654 34442  2 222  3332 2222222221110 0137


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|+++|.
T Consensus       241 ~D~vid~~g~  250 (352)
T 1e3j_A          241 PNVTIDCSGN  250 (352)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999974

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.46  E-value=0.00097  Score=58.58  Aligned_cols=80  Identities=20%  Similarity=0.239  Sum_probs=55.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-C-
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~-   93 (280)
                      .|+++||+| +|++|...++.+...| ++|+++++++++++.+. ++..  + .++..+..+.+++   .+.+.+.. + 
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa--~-~vi~~~~~~~~~~---~~~v~~~~~g~  266 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGA--D-LTLNRRETSVEER---RKAIMDITHGR  266 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTC--S-EEEETTTSCHHHH---HHHHHHHTTTS
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCC--c-EEEeccccCcchH---HHHHHHHhCCC
Confidence            589999999 8999999999888889 59999999988766553 4442  2 2222221123333   34444433 2 


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       267 g~Dvvid~~g~  277 (380)
T 1vj0_A          267 GADFILEATGD  277 (380)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCcEEEECCCC
Confidence            69999999984

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.44  E-value=0.00049  Score=55.52  Aligned_cols=73  Identities=19%  Similarity=0.203  Sum_probs=57.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      .++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+..    .+.++..|.++++.+.+.      ...+.|++|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~~a------~i~~ad~vi   70 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILRDA------EVSKNDVVV   70 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHHHH------TCCTTCEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHHhc------CcccCCEEE
Confidence            4789996 89999999999999999999999998877665442    356788999998765432      124788888


Q ss_pred             ECCC
Q 023613          100 NNAG  103 (280)
Q Consensus       100 ~~ag  103 (280)
                      .+.+
T Consensus        71 ~~~~   74 (218)
T 3l4b_C           71 ILTP   74 (218)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            7764

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.43  E-value=0.0015  Score=57.86  Aligned_cols=43  Identities=19%  Similarity=0.230  Sum_probs=38.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~   58 (280)
                      .+.+++++|+|+ |.+|..+++.+...|++|++++++.+.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467999999996 8999999999999999999999998887765

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.43  E-value=0.00065  Score=59.48  Aligned_cols=74  Identities=19%  Similarity=0.369  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.++||+|+ |++|...++.+...|++|+++++++++++.+. ++..  .. +  .|..+.+.+    +++.   +++|
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa--~~-v--i~~~~~~~~----~~~~---~g~D  259 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGA--DE-V--VNSRNADEM----AAHL---KSFD  259 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTC--SE-E--EETTCHHHH----HTTT---TCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCC--cE-E--eccccHHHH----HHhh---cCCC
Confidence            5899999998 89999999888888999999999988777654 3442  21 2  345554432    2221   5899


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.++|.
T Consensus       260 vvid~~g~  267 (369)
T 1uuf_A          260 FILNTVAA  267 (369)
T ss_dssp             EEEECCSS
T ss_pred             EEEECCCC
Confidence            99999985

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.42  E-value=6.4e-05  Score=63.18  Aligned_cols=72  Identities=13%  Similarity=0.093  Sum_probs=50.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+      .+...     ..+++       .+...
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~------~~~~~-----~~~~~-------~~~~~  174 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL------NINKI-----NLSHA-------ESHLD  174 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS------CCEEE-----CHHHH-------HHTGG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH------hcccc-----cHhhH-------HHHhc
Confidence            578999999997 7999999999999999 79999999887554432      11111     12222       22234


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      ..|+|||+.+..
T Consensus       175 ~aDiVInaTp~G  186 (277)
T 3don_A          175 EFDIIINTTPAG  186 (277)
T ss_dssp             GCSEEEECCC--
T ss_pred             CCCEEEECccCC
Confidence            789999998654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.42  E-value=0.00051  Score=60.22  Aligned_cols=76  Identities=20%  Similarity=0.354  Sum_probs=52.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+||+|++|...++.+...|++|+++++ +++.+. .+++..  +. ++  |..+.+-    .+.+.+ .+++|
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~~lGa--~~-v~--~~~~~~~----~~~~~~-~~g~D  250 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VRKLGA--DD-VI--DYKSGSV----EEQLKS-LKPFD  250 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HHHTTC--SE-EE--ETTSSCH----HHHHHT-SCCBS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HHHcCC--CE-EE--ECCchHH----HHHHhh-cCCCC
Confidence            5899999999999999999988889999998884 444443 345542  22 22  3333222    223332 25899


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|+++|.
T Consensus       251 ~vid~~g~  258 (375)
T 2vn8_A          251 FILDNVGG  258 (375)
T ss_dssp             EEEESSCT
T ss_pred             EEEECCCC
Confidence            99999984

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.41  E-value=0.00057  Score=59.85  Aligned_cols=79  Identities=18%  Similarity=0.285  Sum_probs=53.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   94 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+. .+..  . .+  .|..+ .+++.+.+.++..  ++
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa--~-~v--i~~~~~~~~~~~~~~~~~~--~g  262 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGA--T-DF--VNPNDHSEPISQVLSKMTN--GG  262 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTC--C-EE--ECGGGCSSCHHHHHHHHHT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCC--c-eE--EeccccchhHHHHHHHHhC--CC
Confidence            5899999995 8999999998888999 7999999888776553 4442  2 12  23332 1223222333322  48


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|+++|.
T Consensus       263 ~D~vid~~g~  272 (374)
T 1cdo_A          263 VDFSLECVGN  272 (374)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999974

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.40  E-value=0.002  Score=53.65  Aligned_cols=67  Identities=19%  Similarity=0.184  Sum_probs=52.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. .+.    +...  +..+.              ...|+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~----~~~~--~~~~l--------------~~~Di  175 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG----CDCF--MEPPK--------------SAFDL  175 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT----CEEE--SSCCS--------------SCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC----CeEe--cHHHh--------------ccCCE
Confidence            899999997 89999999999999988999999999888877 544    2222  22221              17899


Q ss_pred             EEECCCCCC
Q 023613           98 MVNNAGISG  106 (280)
Q Consensus        98 li~~ag~~~  106 (280)
                      |||+.+...
T Consensus       176 VInaTp~Gm  184 (269)
T 3phh_A          176 IINATSASL  184 (269)
T ss_dssp             EEECCTTCC
T ss_pred             EEEcccCCC
Confidence            999987654

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.27  E-value=0.0017  Score=56.69  Aligned_cols=79  Identities=15%  Similarity=0.210  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   94 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++..  .. ++  |..+ .+++.+.+.++..  ++
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa--~~-vi--~~~~~~~~~~~~v~~~~~--~g  260 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGA--TE-CI--NPQDFSKPIQEVLIEMTD--GG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTC--SE-EE--CGGGCSSCHHHHHHHHTT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCC--ce-Ee--ccccccccHHHHHHHHhC--CC
Confidence            5899999996 8999999988888899 7999999888776553 4442  21 22  3332 1122222222221  47


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       261 ~D~vid~~g~  270 (373)
T 2fzw_A          261 VDYSFECIGN  270 (373)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCc
Confidence            9999999974

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.27  E-value=0.0019  Score=55.20  Aligned_cols=112  Identities=17%  Similarity=0.181  Sum_probs=71.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCC-C--CeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGE-P--DTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++.|+||+|.+|..++..|++.|  ..|+++++++  .+.....+... .  ++..... ..|.+          +.+..
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~-t~d~~----------~a~~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLG-PEQLP----------DCLKG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEES-GGGHH----------HHHTT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecC-CCCHH----------HHhCC
Confidence            58999999999999999999888  6799999987  22233333322 1  1222110 01221          12248


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      -|++|+.+|....+     ..+..   +.+..|+.....+.+.+.++   ..+++++++|-
T Consensus        69 aDvVvi~ag~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sN  118 (314)
T 1mld_A           69 CDVVVIPAGVPRKP-----GMTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISN  118 (314)
T ss_dssp             CSEEEECCSCCCCT-----TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             CCEEEECCCcCCCC-----CCcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECC
Confidence            99999999986432     12222   34677877777777777665   34578888753

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.25  E-value=0.0021  Score=56.24  Aligned_cols=79  Identities=18%  Similarity=0.253  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   94 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  .. ++  |..+ .+++.+.+.++..  ++
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~-vi--~~~~~~~~~~~~v~~~~~--~g  265 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGA--TD-CL--NPRELDKPVQDVITELTA--GG  265 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTC--SE-EE--CGGGCSSCHHHHHHHHHT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCC--cE-EE--ccccccchHHHHHHHHhC--CC
Confidence            5899999996 8999999988888899 799999988877655 44442  21 22  3332 1122222222222  48


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       266 ~Dvvid~~G~  275 (376)
T 1e3i_A          266 VDYSLDCAGT  275 (376)
T ss_dssp             BSEEEESSCC
T ss_pred             ccEEEECCCC
Confidence            9999999974

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.17  E-value=0.0008  Score=58.19  Aligned_cols=113  Identities=16%  Similarity=0.114  Sum_probs=70.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCC---C-CCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGG---E-PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .++++.|+|++|.+|..++..++..|.  .|++++.++++++.....+..   . .++.+ .   ++..          +
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~~----------~   72 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDIK----------E   72 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCHH----------H
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCHH----------H
Confidence            467899999999999999999999984  699999988766653333321   1 12221 1   1221          1


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCce-EEEEc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGT-IISIC  154 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-iv~is  154 (280)
                      .+..-|++|.+||....+     ..+   =.+.++.|+.-...+.+.+..+   ..++. +++++
T Consensus        73 al~dADvVvitaG~p~kp-----G~~---R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvs  126 (343)
T 3fi9_A           73 ALTDAKYIVSSGGAPRKE-----GMT---REDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIF  126 (343)
T ss_dssp             HHTTEEEEEECCC------------C---HHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECS
T ss_pred             HhCCCCEEEEccCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEec
Confidence            124899999999975321     122   3456777877777767766654   34564 66665

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.16  E-value=0.00062  Score=58.46  Aligned_cols=77  Identities=18%  Similarity=0.196  Sum_probs=50.9

Q ss_pred             Cc-EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GR-VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k-~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      |+ ++||+|++|++|...++.+...|++|+++++++++++.+ +++.  .+. +  .|..+.+  ...++.+.  .+++|
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lG--a~~-~--i~~~~~~--~~~~~~~~--~~~~d  218 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLG--AKE-V--LAREDVM--AERIRPLD--KQRWA  218 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTT--CSE-E--EECC-----------CC--SCCEE
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcC--CcE-E--EecCCcH--HHHHHHhc--CCccc
Confidence            54 799999999999999998888999999999988777655 3444  222 2  2433322  11122221  14799


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|+++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999984

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.15  E-value=0.00053  Score=59.31  Aligned_cols=77  Identities=19%  Similarity=0.246  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+.+ +   .. .+  .|..+. ++.+.+.++.  .+++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l---a~-~v--~~~~~~-~~~~~~~~~~--~~g~  232 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y---AD-RL--VNPLEE-DLLEVVRRVT--GSGV  232 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T---CS-EE--ECTTTS-CHHHHHHHHH--SSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---HH-hc--cCcCcc-CHHHHHHHhc--CCCC
Confidence            6899999999 9999999998888999 89999998776543322 2   11 12  244432 2222233322  2479


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|+++|.
T Consensus       233 D~vid~~g~  241 (343)
T 2dq4_A          233 EVLLEFSGN  241 (343)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999973

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.14  E-value=0.0024  Score=55.81  Aligned_cols=78  Identities=13%  Similarity=0.069  Sum_probs=54.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   94 (280)
                      ..|+++||.||++++|...++.+...|++|+.+. ++++++ ..+++..  . .++  |..+.+    +.+.+++.. ++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa--~-~vi--~~~~~~----~~~~v~~~t~g~  231 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGA--E-EVF--DYRAPN----LAQTIRTYTKNN  231 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTC--S-EEE--ETTSTT----HHHHHHHHTTTC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCC--c-EEE--ECCCch----HHHHHHHHccCC
Confidence            4689999999999999999998888999998886 555554 4455542  2 222  333332    233444433 46


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       232 ~d~v~d~~g~  241 (371)
T 3gqv_A          232 LRYALDCITN  241 (371)
T ss_dssp             CCEEEESSCS
T ss_pred             ccEEEECCCc
Confidence            9999999984

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.13  E-value=0.01  Score=51.86  Aligned_cols=84  Identities=19%  Similarity=0.236  Sum_probs=58.7

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCC-----------CCHHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV-----------TKEEDVCSA   84 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~~~~~~   84 (280)
                      +.+++++|.|+ |.+|..+++.+...|++|++.+|+.++++.+.+ +..    .++..|+           ...+....-
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa----~~~~l~~~~~~~~gya~~~~~~~~~~~  255 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGA----QWLDLGIDAAGEGGYARELSEAERAQQ  255 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTC----EECCCC-------------CHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC----eEEeccccccccccchhhhhHHHHhhh
Confidence            57899999999 799999999999999999999999988877654 331    1222211           011222333


Q ss_pred             HHHHHHHcCCccEEEECCCCC
Q 023613           85 VDLTVEKFGTLDIMVNNAGIS  105 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~  105 (280)
                      .+.+.+.....|++|+++.+.
T Consensus       256 ~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          256 QQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHTTCSEEEECCCCT
T ss_pred             HHHHHHHHhcCCEEEECCCCC
Confidence            444555557999999987654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.11  E-value=0.0032  Score=54.27  Aligned_cols=76  Identities=18%  Similarity=0.285  Sum_probs=54.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+|+ |++|...++.+...|++|+++++++++++.+ +++..  .. ++  |..+.+..    +.+.+..+++|
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa--~~-~i--~~~~~~~~----~~~~~~~g~~d  234 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGA--EV-AV--NARDTDPA----AWLQKEIGGAH  234 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTC--SE-EE--ETTTSCHH----HHHHHHHSSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCC--CE-EE--eCCCcCHH----HHHHHhCCCCC
Confidence            6899999997 8999999988888999999999998877654 44442  22 22  33333222    23333346899


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|.++|
T Consensus       235 ~vid~~g  241 (340)
T 3s2e_A          235 GVLVTAV  241 (340)
T ss_dssp             EEEESSC
T ss_pred             EEEEeCC
Confidence            9999987

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.10  E-value=0.005  Score=53.44  Aligned_cols=78  Identities=17%  Similarity=0.359  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCC--CHHHHHHHHHHHHHHc-
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVT--KEEDVCSAVDLTVEKF-   92 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~-   92 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  . .++  |..  +.++.   .+.+.+.. 
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~-~vi--~~~~~~~~~~---~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGA--D-LVL--QISKESPQEI---ARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC--S-EEE--ECSSCCHHHH---HHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCC--C-EEE--cCcccccchH---HHHHHHHhC
Confidence            5899999996 8999999988888899 899999988776654 34442  2 222  333  22332   23333322 


Q ss_pred             CCccEEEECCCC
Q 023613           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 ~~~d~li~~ag~  104 (280)
                      +++|++|.++|.
T Consensus       241 ~g~D~vid~~g~  252 (356)
T 1pl8_A          241 CKPEVTIECTGA  252 (356)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999973

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.07  E-value=0.0035  Score=55.10  Aligned_cols=45  Identities=22%  Similarity=0.186  Sum_probs=39.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   60 (280)
                      .+.+++++|+|+ |++|+.+++.+...|++|++++|+.++++...+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~  213 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES  213 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            568999999996 899999999999999999999999887766543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.05  E-value=0.0061  Score=52.28  Aligned_cols=116  Identities=13%  Similarity=0.132  Sum_probs=67.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .+..++.+.|+|+ |.+|.+++..|+..|.  .+++.++++++++.....+...    ..+.+...|   .         
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~---------   71 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y---------   71 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G---------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H---------
Confidence            3456788999996 9999999999999886  7999999887776554444321    123332222   1         


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                        +.+..-|++|..||....+     ..+   =.+.++.|..-...+.+.+..+   ..++.+++++-
T Consensus        72 --~a~~~aDiVvi~ag~~~kp-----G~t---R~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvtN  126 (326)
T 3vku_A           72 --SDAKDADLVVITAGAPQKP-----GET---RLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAAN  126 (326)
T ss_dssp             --GGGTTCSEEEECCCCC------------------------CHHHHHHHHHTT---TCCSEEEECSS
T ss_pred             --HHhcCCCEEEECCCCCCCC-----Cch---HHHHHHHHHHHHHHHHHHHHhc---CCceEEEEccC
Confidence              1235899999999975321     112   2455677776666666666553   34577777763

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.05  E-value=0.0014  Score=57.04  Aligned_cols=75  Identities=20%  Similarity=0.326  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+|+ |++|...++.+...|++|+++++++++++.+.+.+..  +. ++  |..+.+.+       .+..+++|
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa--~~-vi--~~~~~~~~-------~~~~~g~D  246 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA--DD-YV--IGSDQAKM-------SELADSLD  246 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC--SC-EE--ETTCHHHH-------HHSTTTEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC--ce-ee--ccccHHHH-------HHhcCCCC
Confidence            6899999995 9999999988888899999999998877665544442  21 22  34444322       22225899


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.++|.
T Consensus       247 ~vid~~g~  254 (357)
T 2cf5_A          247 YVIDTVPV  254 (357)
T ss_dssp             EEEECCCS
T ss_pred             EEEECCCC
Confidence            99999985

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.05  E-value=0.0013  Score=57.23  Aligned_cols=81  Identities=12%  Similarity=0.062  Sum_probs=51.4

Q ss_pred             CC-cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch---HHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH-
Q 023613           17 VG-RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL---GQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK-   91 (280)
Q Consensus        17 ~~-k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   91 (280)
                      .| +++||+||+|++|...++.+...|++|+++.++.+.   ..+..+++..  .. ++  |..+. ....+.+.+.+. 
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa--~~-vi--~~~~~-~~~~~~~~i~~~t  239 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA--TQ-VI--TEDQN-NSREFGPTIKEWI  239 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC--SE-EE--EHHHH-HCGGGHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCC--eE-EE--ecCcc-chHHHHHHHHHHh
Confidence            47 999999999999999988877889999988876654   1233345542  22 22  21110 001123333332 


Q ss_pred             ---cCCccEEEECCC
Q 023613           92 ---FGTLDIMVNNAG  103 (280)
Q Consensus        92 ---~~~~d~li~~ag  103 (280)
                         .+++|++|.++|
T Consensus       240 ~~~~~g~Dvvid~~G  254 (364)
T 1gu7_A          240 KQSGGEAKLALNCVG  254 (364)
T ss_dssp             HHHTCCEEEEEESSC
T ss_pred             hccCCCceEEEECCC
Confidence               247999999997

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.03  E-value=0.0012  Score=53.82  Aligned_cols=72  Identities=15%  Similarity=0.159  Sum_probs=53.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .+.++|.|+ +.+|+.+++.|.+.|+ |++++++++..+.+.      ..+.++.+|.++++.+++.      ...+.|.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------~~~~~i~gd~~~~~~l~~a------~i~~ad~   74 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR------SGANFVHGDPTRVSDLEKA------NVRGARA   74 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------TTCEEEESCTTCHHHHHHT------TCTTCSE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------cCCeEEEcCCCCHHHHHhc------CcchhcE
Confidence            556888897 8999999999999999 999999988765543      1366788999988655432      1236788


Q ss_pred             EEECCC
Q 023613           98 MVNNAG  103 (280)
Q Consensus        98 li~~ag  103 (280)
                      +|.+.+
T Consensus        75 vi~~~~   80 (234)
T 2aef_A           75 VIVDLE   80 (234)
T ss_dssp             EEECCS
T ss_pred             EEEcCC
Confidence            877653

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.98  E-value=0.0068  Score=51.09  Aligned_cols=89  Identities=15%  Similarity=0.184  Sum_probs=61.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc------------------chHHHHH---HHhCCCCCeEE
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD------------------NLGQQVC---QSLGGEPDTFF   70 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~------------------~~~~~~~---~~~~~~~~~~~   70 (280)
                      ...|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                  .+.+...   +.++...++..
T Consensus        31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~  109 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV  109 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence            34578999999987 6999999999999995 588888765                  3333333   33444456666


Q ss_pred             EecCCCCHHHHHHHHHHHHHH----cCCccEEEECC
Q 023613           71 CHCDVTKEEDVCSAVDLTVEK----FGTLDIMVNNA  102 (280)
Q Consensus        71 ~~~D~~~~~~~~~~~~~~~~~----~~~~d~li~~a  102 (280)
                      +..++++.+.+..+++.+...    ..+.|+||.+.
T Consensus       110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            777787767776666544321    13688888766

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.98  E-value=0.0017  Score=57.00  Aligned_cols=81  Identities=17%  Similarity=0.229  Sum_probs=54.9

Q ss_pred             cCCcEEEEEc-CCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITG-GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItG-a~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ..|.++||.| |++++|...++.+...|++|+.+++++++++.+. ++..  +. ++  |..+.+-.+++.+....  .+
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa--~~-~~--~~~~~~~~~~v~~~t~~--~g  240 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGA--VH-VC--NAASPTFMQDLTEALVS--TG  240 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTC--SC-EE--ETTSTTHHHHHHHHHHH--HC
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCC--cE-EE--eCCChHHHHHHHHHhcC--CC
Confidence            3588999997 8999999999888888999999999888776554 4442  22 22  33333222222222211  27


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       241 ~d~v~d~~g~  250 (379)
T 3iup_A          241 ATIAFDATGG  250 (379)
T ss_dssp             CCEEEESCEE
T ss_pred             ceEEEECCCc
Confidence            9999999985

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.96  E-value=0.012  Score=50.47  Aligned_cols=112  Identities=14%  Similarity=0.086  Sum_probs=73.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC-----CCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE-----PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .+++.|+|+ |.+|.+++..|++.|.  .|++.++++++++.....+...     ..+.+...|   .           +
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------E   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------H
Confidence            567899996 9999999999999986  7999999887766543333211     123333222   1           1


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      .+..-|++|..+|....+     ..+.   .+.++.|..-...+.+.+..+   ..++.+++++-
T Consensus        70 a~~~aDvVvi~ag~p~kp-----G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtN  123 (326)
T 3pqe_A           70 DCKDADIVCICAGANQKP-----GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATN  123 (326)
T ss_dssp             GGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSS
T ss_pred             HhCCCCEEEEecccCCCC-----CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCC
Confidence            234889999999975331     2233   345777777766666666654   34577777763

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.95  E-value=0.0031  Score=54.82  Aligned_cols=76  Identities=25%  Similarity=0.356  Sum_probs=53.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-C-
Q 023613           17 VGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~-   93 (280)
                      .|+++||+|+ |++|...++.+... |++|+++++++++++.+. ++.  .+. +  .|..+.  +   .+.+.+.. + 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lG--a~~-v--i~~~~~--~---~~~v~~~~~g~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLG--ADH-V--VDARRD--P---VKQVMELTRGR  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTT--CSE-E--EETTSC--H---HHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhC--CCE-E--Eeccch--H---HHHHHHHhCCC
Confidence            5899999999 89999999888888 999999999888766553 444  222 2  244433  2   22333322 3 


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       254 g~Dvvid~~G~  264 (359)
T 1h2b_A          254 GVNVAMDFVGS  264 (359)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999984

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.93  E-value=0.00097  Score=56.06  Aligned_cols=70  Identities=7%  Similarity=0.206  Sum_probs=52.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+.+      ..+.     .++       +.+ . 
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~------~~~~-----~~~-------l~~-l-  177 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF------KVIS-----YDE-------LSN-L-  177 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS------EEEE-----HHH-------HTT-C-
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc------Cccc-----HHH-------HHh-c-
Confidence            468999999998 6999999999999998 7999999998877665432      1111     122       222 3 


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      ..|+|||+.+..
T Consensus       178 ~~DivInaTp~G  189 (282)
T 3fbt_A          178 KGDVIINCTPKG  189 (282)
T ss_dssp             CCSEEEECSSTT
T ss_pred             cCCEEEECCccC
Confidence            789999998664

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.93  E-value=0.0011  Score=57.85  Aligned_cols=75  Identities=21%  Similarity=0.272  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+|+ |++|...++.+...|++|+++++++++++.+. ++..  .. ++  |..+..+   +.+.+.   +++|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lGa--~~-v~--~~~~~~~---~~~~~~---~~~D  245 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGA--DH-YI--ATLEEGD---WGEKYF---DTFD  245 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTC--SE-EE--EGGGTSC---HHHHSC---SCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCC--CE-EE--cCcCchH---HHHHhh---cCCC
Confidence            5899999999 99999999888888999999999888776554 3442  22 22  3222201   122222   5899


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.++|.
T Consensus       246 ~vid~~g~  253 (360)
T 1piw_A          246 LIVVCASS  253 (360)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCC
Confidence            99999986

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.93  E-value=0.0017  Score=56.76  Aligned_cols=79  Identities=15%  Similarity=0.228  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   94 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+ +.+..  . .++  |..+ .+++.+.+.++..  ++
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa--~-~vi--~~~~~~~~~~~~~~~~~~--~g  261 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGA--T-ECV--NPQDYKKPIQEVLTEMSN--GG  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTC--S-EEE--CGGGCSSCHHHHHHHHTT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCC--c-eEe--cccccchhHHHHHHHHhC--CC
Confidence            5899999995 8999999998888999 799999988877655 34442  2 122  3332 1122222222221  47


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       262 ~D~vid~~g~  271 (374)
T 2jhf_A          262 VDFSFEVIGR  271 (374)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            9999999974

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.87  E-value=0.002  Score=56.19  Aligned_cols=77  Identities=21%  Similarity=0.270  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   94 (280)
                      .|+++||+||+|++|...++.+.. .|++|+++++++++++.+ +++.  .+. +  .|..+  +   +.+.+.+.. ++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~lG--ad~-v--i~~~~--~---~~~~v~~~~~~g  239 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSLG--AHH-V--IDHSK--P---LAAEVAALGLGA  239 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHTT--CSE-E--ECTTS--C---HHHHHHTTCSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHcC--CCE-E--EeCCC--C---HHHHHHHhcCCC
Confidence            589999999999999988876655 589999999998877655 3444  222 2  23332  1   233444332 47


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       240 ~Dvvid~~g~  249 (363)
T 4dvj_A          240 PAFVFSTTHT  249 (363)
T ss_dssp             EEEEEECSCH
T ss_pred             ceEEEECCCc
Confidence            9999999873

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.86  E-value=0.0022  Score=55.44  Aligned_cols=77  Identities=14%  Similarity=0.200  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc--CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKH--GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|+++||+|+ +++|...++.+...  |++|+++++++++++.+. ++..  +. +  .|..+.+   ..++++.+ ..+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa--~~-v--i~~~~~~---~~~~~~~~-g~g  238 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGA--DY-V--SEMKDAE---SLINKLTD-GLG  238 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTC--SE-E--ECHHHHH---HHHHHHHT-TCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCC--CE-E--eccccch---HHHHHhhc-CCC
Confidence            6899999999 89999999988888  999999999888776553 3442  21 2  2322201   22333332 127


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       239 ~D~vid~~g~  248 (344)
T 2h6e_A          239 ASIAIDLVGT  248 (344)
T ss_dssp             EEEEEESSCC
T ss_pred             ccEEEECCCC
Confidence            9999999973

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.84  E-value=0.012  Score=51.76  Aligned_cols=44  Identities=20%  Similarity=0.260  Sum_probs=39.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   60 (280)
                      +.+.+++|.|+ |.+|..+++.+...|++|++.+++.++++.+.+
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            57899999999 799999999999999999999999988776654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.83  E-value=0.002  Score=55.79  Aligned_cols=70  Identities=21%  Similarity=0.337  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||.|+ |++|...++.+...|++|+++++++++.+.+ +++.  .+..+     .+.+.+.          .++|
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lG--a~~v~-----~~~~~~~----------~~~D  236 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSMG--VKHFY-----TDPKQCK----------EELD  236 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHTT--CSEEE-----SSGGGCC----------SCEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcC--CCeec-----CCHHHHh----------cCCC
Confidence            5999999997 8999999988888999999999998877754 3444  22222     2332221          1899


Q ss_pred             EEEECCCCC
Q 023613           97 IMVNNAGIS  105 (280)
Q Consensus        97 ~li~~ag~~  105 (280)
                      ++|.++|..
T Consensus       237 ~vid~~g~~  245 (348)
T 3two_A          237 FIISTIPTH  245 (348)
T ss_dssp             EEEECCCSC
T ss_pred             EEEECCCcH
Confidence            999999853

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.82  E-value=0.00082  Score=55.64  Aligned_cols=71  Identities=7%  Similarity=0.162  Sum_probs=49.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+.+      ....+     +++.+.+       .
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~------~~~~~-----~~~~~~~-------~  165 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV------KIFSL-----DQLDEVV-------K  165 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC------EEEEG-----GGHHHHH-------H
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc------ccCCH-----HHHHhhh-------c
Confidence            3567 8999987 8999999999999998 7999999987765543321      11211     1222222       2


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      ..|+|||+....
T Consensus       166 ~aDiVInatp~g  177 (253)
T 3u62_A          166 KAKSLFNTTSVG  177 (253)
T ss_dssp             TCSEEEECSSTT
T ss_pred             CCCEEEECCCCC
Confidence            789999988654

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.81  E-value=0.0028  Score=56.04  Aligned_cols=77  Identities=27%  Similarity=0.455  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-C-
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~-   93 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  +. ++  |..+.+    +.+.+.+.. + 
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa--~~-vi--~~~~~~----~~~~i~~~t~g~  281 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGA--DH-VI--DPTKEN----FVEAVLDYTNGL  281 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTC--SE-EE--CTTTSC----HHHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCC--CE-EE--cCCCCC----HHHHHHHHhCCC
Confidence            5899999998 8999999888888899 799999888776644 44442  22 22  433332    233444433 2 


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       282 g~D~vid~~g~  292 (404)
T 3ip1_A          282 GAKLFLEATGV  292 (404)
T ss_dssp             CCSEEEECSSC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.81  E-value=0.0033  Score=55.09  Aligned_cols=78  Identities=17%  Similarity=0.252  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHc-C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKF-G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~-~   93 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  .. ++  |..+ .+++   .+.+++.. +
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~-vi--~~~~~~~~~---~~~i~~~~~g  262 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKFGV--NE-FV--NPKDHDKPI---QEVIVDLTDG  262 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTTTC--CE-EE--CGGGCSSCH---HHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC--cE-EE--ccccCchhH---HHHHHHhcCC
Confidence            5899999998 9999999988888899 799999998877643 44442  22 22  3321 1222   23333332 4


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999984

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.81  E-value=0.0038  Score=53.80  Aligned_cols=114  Identities=18%  Similarity=0.147  Sum_probs=70.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--e-----EEEEecCc--chHHHHHHHhCC-C-CCeEEEecCCCCHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA--K-----VCIADVQD--NLGQQVCQSLGG-E-PDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~--~-----V~~~~r~~--~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ++++||||+|.||..++..|+..|.  .     +++.+.++  +.++.....+.. . ....-+.. -.+.         
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~-~~~~---------   73 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA-TDKE---------   73 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE-ESCH---------
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEE-cCCc---------
Confidence            5689999999999999999998775  4     88898864  234333333321 1 11111111 1111         


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCc-eEEEEc
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISIC  154 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~is  154 (280)
                       .+.+.+-|++|+.||....+     ..+   -.+.++.|+.....+.+.+..+   ..++ ++++++
T Consensus        74 -~~~~~daDvVvitAg~prkp-----G~t---R~dll~~N~~i~~~i~~~i~~~---~~~~~~vivvs  129 (333)
T 5mdh_A           74 -EIAFKDLDVAILVGSMPRRD-----GME---RKDLLKANVKIFKCQGAALDKY---AKKSVKVIVVG  129 (333)
T ss_dssp             -HHHTTTCSEEEECCSCCCCT-----TCC---TTTTHHHHHHHHHHHHHHHHHH---SCTTCEEEECS
T ss_pred             -HHHhCCCCEEEEeCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEcC
Confidence             11234899999999875431     122   2456777887777777776654   2345 577666

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.72  E-value=0.0021  Score=56.27  Aligned_cols=101  Identities=24%  Similarity=0.369  Sum_probs=66.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH---H-
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE---K-   91 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~-   91 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+. .+++..  .. +  .|..+.+-    .+.+.+   . 
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~lGa--~~-v--i~~~~~~~----~~~i~~~~~~~  250 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEVGA--TA-T--VDPSAGDV----VEAIAGPVGLV  250 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHHTC--SE-E--ECTTSSCH----HHHHHSTTSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHcCC--CE-E--ECCCCcCH----HHHHHhhhhcc
Confidence            5899999998 8999999988888899 78888888877654 444542  21 2  24443322    233333   2 


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      .+++|++|.++|..                           ...+.++..+.  .+|+++.++...
T Consensus       251 ~gg~Dvvid~~G~~---------------------------~~~~~~~~~l~--~~G~vv~~G~~~  287 (370)
T 4ej6_A          251 PGGVDVVIECAGVA---------------------------ETVKQSTRLAK--AGGTVVILGVLP  287 (370)
T ss_dssp             TTCEEEEEECSCCH---------------------------HHHHHHHHHEE--EEEEEEECSCCC
T ss_pred             CCCCCEEEECCCCH---------------------------HHHHHHHHHhc--cCCEEEEEeccC
Confidence            24899999998731                           12344555653  368999887544

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.72  E-value=0.003  Score=54.91  Aligned_cols=98  Identities=14%  Similarity=0.201  Sum_probs=64.1

Q ss_pred             CcEEEEEcCCChHHHHH-HHHH-HHcCCe-EEEEecCcc---hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGEST-VRLF-HKHGAK-VCIADVQDN---LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGa~~giG~~l-a~~l-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++||+|+ |++|... ++.+ ...|++ |+.++++++   +++.+ +++..    ..+  |..+. ++.+ +.++   
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lGa----~~v--~~~~~-~~~~-i~~~---  239 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELDA----TYV--DSRQT-PVED-VPDV---  239 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTTC----EEE--ETTTS-CGGG-HHHH---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcCC----ccc--CCCcc-CHHH-HHHh---
Confidence            399999999 9999999 7766 567998 999999887   66554 44442    122  44432 2222 3333   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      .+++|++|.++|...                           .++.++..+.  .+|+++.++...
T Consensus       240 ~gg~Dvvid~~g~~~---------------------------~~~~~~~~l~--~~G~iv~~g~~~  276 (357)
T 2b5w_A          240 YEQMDFIYEATGFPK---------------------------HAIQSVQALA--PNGVGALLGVPS  276 (357)
T ss_dssp             SCCEEEEEECSCCHH---------------------------HHHHHHHHEE--EEEEEEECCCCC
T ss_pred             CCCCCEEEECCCChH---------------------------HHHHHHHHHh--cCCEEEEEeCCC
Confidence            248999999997410                           1234455553  358999987654

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.69  E-value=0.0068  Score=50.02  Aligned_cols=81  Identities=23%  Similarity=0.285  Sum_probs=52.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc-------------------chHHHHHHHh---CCCCCeEE
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD-------------------NLGQQVCQSL---GGEPDTFF   70 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~-------------------~~~~~~~~~~---~~~~~~~~   70 (280)
                      ..|++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+   ....++..
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  102 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA  102 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            3578999999998 6799999999999997 477776542                   3333333333   33344555


Q ss_pred             EecCCCCHHHHHHHHHHHHHHcCCccEEEECCC
Q 023613           71 CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        71 ~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag  103 (280)
                      +..++. .+.+..+++       ..|+||++..
T Consensus       103 ~~~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            555554 344443333       6789988763

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.67  E-value=0.0032  Score=54.98  Aligned_cols=78  Identities=21%  Similarity=0.280  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHc-C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKF-G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~-~   93 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++..  +. ++  |..+ .+++   .+.+.+.. +
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~-vi--~~~~~~~~~---~~~i~~~t~g  260 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGA--TE-CL--NPKDYDKPI---YEVICEKTNG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTC--SE-EE--CGGGCSSCH---HHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCC--cE-EE--ecccccchH---HHHHHHHhCC
Confidence            5899999996 8999999988878899 799999988877654 34442  21 22  3322 1122   22333322 4


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999974

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.65  E-value=0.0055  Score=52.35  Aligned_cols=73  Identities=23%  Similarity=0.429  Sum_probs=50.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||+||+|++|...++.+...|++|+.+.+++.  .+..+++..  .. ++  |..+.+.+       .+...++|
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~--~~~~~~lGa--~~-~i--~~~~~~~~-------~~~~~g~D  217 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN--HAFLKALGA--EQ-CI--NYHEEDFL-------LAISTPVD  217 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH--HHHHHHHTC--SE-EE--ETTTSCHH-------HHCCSCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch--HHHHHHcCC--CE-EE--eCCCcchh-------hhhccCCC
Confidence            5899999999999999999999899999998876443  344455542  21 22  33333211       11225899


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|.++|
T Consensus       218 ~v~d~~g  224 (321)
T 3tqh_A          218 AVIDLVG  224 (321)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.61  E-value=0.0079  Score=52.44  Aligned_cols=77  Identities=16%  Similarity=0.217  Sum_probs=52.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   94 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++++.+ +.+..  +. ++  |..+.+    +.+.+.+.. ++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~-vi--~~~~~~----~~~~~~~~~~gg  258 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGA--TH-VI--NSKTQD----PVAAIKEITDGG  258 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTC--SE-EE--ETTTSC----HHHHHHHHTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCC--CE-Ee--cCCccC----HHHHHHHhcCCC
Confidence            5899999995 8999999988878899 589999988776654 44442  22 22  332221    123333332 47


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus       259 ~D~vid~~g~  268 (371)
T 1f8f_A          259 VNFALESTGS  268 (371)
T ss_dssp             EEEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            9999999973

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.54  E-value=0.012  Score=51.82  Aligned_cols=78  Identities=18%  Similarity=0.172  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-C-
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~-   93 (280)
                      .|+++||.|+ |++|...++.+...|+ +|+++++++++++.+ +++.  .  .++  |..+.+.+   .+.+.+.. + 
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lG--a--~~i--~~~~~~~~---~~~~~~~~~g~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-SDAG--F--ETI--DLRNSAPL---RDQIDQILGKP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HTTT--C--EEE--ETTSSSCH---HHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcC--C--cEE--cCCCcchH---HHHHHHHhCCC
Confidence            5899999997 9999999888777899 899999998876654 3333  2  233  33332210   12222222 3 


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      ++|++|.++|..
T Consensus       254 g~Dvvid~~g~~  265 (398)
T 2dph_A          254 EVDCGVDAVGFE  265 (398)
T ss_dssp             CEEEEEECSCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.53  E-value=0.0066  Score=53.88  Aligned_cols=72  Identities=19%  Similarity=0.198  Sum_probs=51.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      ..++|.|. |.+|+.+++.|.+.|..|++++++++..+.+.+.     .+.++.+|.++++.++++      ...+.|++
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~-----g~~vi~GDat~~~~L~~a------gi~~A~~v   72 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF-----GMKVFYGDATRMDLLESA------GAAKAEVL   72 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT-----TCCCEESCTTCHHHHHHT------TTTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC-----CCeEEEcCCCCHHHHHhc------CCCccCEE
Confidence            45888886 7799999999999999999999999877765431     234566777776654332      11255666


Q ss_pred             EECC
Q 023613           99 VNNA  102 (280)
Q Consensus        99 i~~a  102 (280)
                      |.+.
T Consensus        73 iv~~   76 (413)
T 3l9w_A           73 INAI   76 (413)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            6555

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.51  E-value=0.0046  Score=53.85  Aligned_cols=47  Identities=17%  Similarity=0.267  Sum_probs=41.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~   62 (280)
                      +++||+++|.|. |.+|+.+|+.|.+.|++|++.+++.+.++++.+..
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999997 78999999999999999999999988877776654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.50  E-value=0.0023  Score=55.67  Aligned_cols=37  Identities=11%  Similarity=0.248  Sum_probs=31.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .|+++||.||+|++|...++.+...|++++++.++.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            5899999999999999998887778999887766543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.49  E-value=0.0046  Score=49.32  Aligned_cols=42  Identities=10%  Similarity=0.258  Sum_probs=36.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~   61 (280)
                      +++|+||+|.+|.++++.|++.|++|.+.+|+++..+.+.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            578999999999999999999999999999998776665443

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.48  E-value=0.0062  Score=53.68  Aligned_cols=78  Identities=15%  Similarity=0.249  Sum_probs=53.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      .|+++||.|+ |++|...++.+...|+ +|+++++++++++.+ +++..  +  ++  |..+.+.+   .+.+++..  .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~--~i--~~~~~~~~---~~~v~~~t~g~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGF--E--IA--DLSLDTPL---HEQIAALLGEP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC--E--EE--ETTSSSCH---HHHHHHHHSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCC--c--EE--ccCCcchH---HHHHHHHhCCC
Confidence            5899999995 9999999887778899 588899988877655 44442  2  22  33332222   23333332  2


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      ++|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (398)
T 1kol_A          254 EVDCAVDAVGFE  265 (398)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.48  E-value=0.036  Score=47.57  Aligned_cols=115  Identities=8%  Similarity=0.057  Sum_probs=76.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ...+.+.|+|+ |.+|.+++..|+..|.  .|++.++++++++.....+...    ........+  |.+          
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----------
Confidence            34678999997 8999999999999886  7999999987666654444311    111222221  211          


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                       .+..-|++|..||....+     ..+.   .+.++.|..-...+.+.+..+   ..++.+++++-
T Consensus        84 -~~~~aDiVvi~aG~~~kp-----G~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtN  137 (331)
T 4aj2_A           84 -VTANSKLVIITAGARQQE-----GESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSN  137 (331)
T ss_dssp             -GGTTEEEEEECCSCCCCT-----TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSS
T ss_pred             -HhCCCCEEEEccCCCCCC-----CccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecC
Confidence             124899999999975431     2333   346777777777777776664   44678887764

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.48  E-value=0.003  Score=53.86  Aligned_cols=83  Identities=17%  Similarity=0.169  Sum_probs=55.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++.||+++|.|++.-+|+.+|+.|+..|++|.++.|+...+....+.+..... ....+..++++++.+.+.       .
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~-~~t~~~~t~~~~L~e~l~-------~  245 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKH-HVEDLGEYSEDLLKKCSL-------D  245 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCC-EEEEEEECCHHHHHHHHH-------H
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcc-cccccccccHhHHHHHhc-------c
Confidence            68999999999998899999999999999999999885433222222221111 111111133455544444       7


Q ss_pred             ccEEEECCCCC
Q 023613           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 ~d~li~~ag~~  105 (280)
                      -|+||...|..
T Consensus       246 ADIVIsAtg~p  256 (320)
T 1edz_A          246 SDVVITGVPSE  256 (320)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEECCCCC
Confidence            89999999863

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.45  E-value=0.0036  Score=54.20  Aligned_cols=77  Identities=16%  Similarity=0.203  Sum_probs=52.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-C-
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-G-   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~-   93 (280)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++.. +++..  + .++  |..+.+    +.+.+++.. + 
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa--~-~vi--~~~~~~----~~~~v~~~t~g~  234 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEYGA--T-DII--NYKNGD----IVEQILKATDGK  234 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHHTC--C-EEE--CGGGSC----HHHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCC--c-eEE--cCCCcC----HHHHHHHHcCCC
Confidence            5899999985 8999999888888899 799999988766544 44542  2 122  332222    234444443 2 


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       235 g~D~v~d~~g~  245 (352)
T 3fpc_A          235 GVDKVVIAGGD  245 (352)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCC
Confidence            69999999875

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.44  E-value=0.054  Score=46.14  Aligned_cols=111  Identities=16%  Similarity=0.184  Sum_probs=72.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecC--cchHHHHHHHhC-------CCCCeEEEecCCCCHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQ--DNLGQQVCQSLG-------GEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~--~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      +.+.+.|+|+ |.+|..++..|++.|. .|++.+++  ++..+.....+.       ...++.. ..|   .        
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~--------   73 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y--------   73 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H--------
Confidence            4678999997 9999999999999998 89999998  444433222221       1122221 112   1        


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        87 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                         +.+..-|++|..+|....+     ..+.   .+.++.|..-...+.+.+..+   ..++.+++++
T Consensus        74 ---~a~~~aDvVIiaag~p~kp-----g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvs  127 (315)
T 3tl2_A           74 ---ADTADSDVVVITAGIARKP-----GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLT  127 (315)
T ss_dssp             ---GGGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             ---HHhCCCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECC
Confidence               1235899999999985432     2333   456777777777777776664   3457777776

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.39  E-value=0.0051  Score=51.42  Aligned_cols=40  Identities=23%  Similarity=0.441  Sum_probs=36.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .+++||.++|.|.++-+|+.++..|.+.|++|.++.|+..
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~  195 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch
Confidence            3589999999999999999999999999999999887543

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.38  E-value=0.077  Score=44.21  Aligned_cols=167  Identities=12%  Similarity=0.099  Sum_probs=96.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEE-EEecCcchH--H-----------------HHHHHhCCCCCeEEEecCCCC
Q 023613           19 RVALITGGATGIGESTVRLFHKH-GAKVC-IADVQDNLG--Q-----------------QVCQSLGGEPDTFFCHCDVTK   77 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~-g~~V~-~~~r~~~~~--~-----------------~~~~~~~~~~~~~~~~~D~~~   77 (280)
                      -+++|+|++|.+|+.+++.+.+. |+.++ +++++.+..  .                 .+.+.+. ..++   ..|++.
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~-~~Dv---VIDft~   81 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-DFDV---FIDFTR   81 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-SCSE---EEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc-CCCE---EEEcCC
Confidence            47999999999999999998854 77766 455554220  0                 0111111 2233   348889


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHH-------hhhh----hHhHHHHHHHHHHhcccCC
Q 023613           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKV-------FDIN----VKGVFHGMKHAARIMIPQT  146 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~-------~~~n----~~~~~~l~~~~~~~l~~~~  146 (280)
                      ++.....+....+.  ++.+++-..|...        ...+.+.+.       +..|    +.-.+.+++.+.++|..  
T Consensus        82 p~~~~~~~~~a~~~--G~~vVigTtG~~~--------e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~--  149 (273)
T 1dih_A           82 PEGTLNHLAFCRQH--GKGMVIGTTGFDE--------AGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGD--  149 (273)
T ss_dssp             HHHHHHHHHHHHHT--TCEEEECCCCCCH--------HHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTT--
T ss_pred             hHHHHHHHHHHHhC--CCCEEEECCCCCH--------HHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCC--
Confidence            99888888877765  7778877775321        012222221       1112    11234455555555531  


Q ss_pred             CceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHC---------------CCCeEEEEEeCCeeecc
Q 023613          147 KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG---------------KYGIRVNCVSPYAVATG  204 (280)
Q Consensus       147 ~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~---------------~~gi~v~~v~pg~v~T~  204 (280)
                      .-.|=.   ...++...--++|+.++...+.+.+.+...+.               ..+|.|.++.-|-+-.+
T Consensus       150 ~~diei---iE~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~  219 (273)
T 1dih_A          150 YTDIEI---IEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGE  219 (273)
T ss_dssp             TSEEEE---EEEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             CCCEEE---EEeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCcc
Confidence            112222   23455555567889999888887666543221               34689999986655443

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.37  E-value=0.05  Score=46.49  Aligned_cols=112  Identities=15%  Similarity=0.178  Sum_probs=72.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCC-----CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGE-----PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.+.|+|+ |.+|.+++..|+..|. .|++.++++++.+.....+...     ....+...+  +.+           .
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~~-----------a   70 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DYK-----------D   70 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CHH-----------H
Confidence            456888885 9999999999999887 8999999988765444443321     112222111  111           2


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      +..-|++|..+|....+     ..+.   .+.+..|..-...+.+.+..+   ..++.+++++
T Consensus        71 ~~~aDvVIi~ag~p~k~-----G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvt  122 (321)
T 3p7m_A           71 LENSDVVIVTAGVPRKP-----GMSR---DDLLGINIKVMQTVGEGIKHN---CPNAFVICIT  122 (321)
T ss_dssp             GTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             HCCCCEEEEcCCcCCCC-----CCCH---HHHHHHhHHHHHHHHHHHHHH---CCCcEEEEec
Confidence            34889999999975432     2333   345667777777767766665   3457777775

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.36  E-value=0.033  Score=47.68  Aligned_cols=112  Identities=15%  Similarity=0.158  Sum_probs=71.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC-------CCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG-------GEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +.+.+.|+|+ |.+|.+++..|+..|. .|++.++++++.+.....+.       ...++.. ..|.             
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d~-------------   70 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-ANDY-------------   70 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESSG-------------
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCCH-------------
Confidence            4567899998 9999999999999998 89999999876653322221       1122221 1221             


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                       +.+..-|++|..+|....+     ..+.   .+.+..|..-...+.+.+..+   ..++.+++++-
T Consensus        71 -~a~~~aDiVIiaag~p~k~-----G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtN  125 (324)
T 3gvi_A           71 -AAIEGADVVIVTAGVPRKP-----GMSR---DDLLGINLKVMEQVGAGIKKY---APEAFVICITN  125 (324)
T ss_dssp             -GGGTTCSEEEECCSCCCC-------------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             -HHHCCCCEEEEccCcCCCC-----CCCH---HHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCC
Confidence             1224889999999975432     1222   245666776666666666654   34577777763

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.33  E-value=0.032  Score=49.57  Aligned_cols=39  Identities=23%  Similarity=0.458  Sum_probs=34.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      .+.||+++|.|.+ .||+.+|+.+...|++|+++++++..
T Consensus       244 ~L~GKTVgVIG~G-~IGr~vA~~lrafGa~Viv~d~dp~~  282 (464)
T 3n58_A          244 MMAGKVAVVCGYG-DVGKGSAQSLAGAGARVKVTEVDPIC  282 (464)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             cccCCEEEEECcC-HHHHHHHHHHHHCCCEEEEEeCCcch
Confidence            5889999999964 69999999999999999999987654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.28  E-value=0.017  Score=49.67  Aligned_cols=100  Identities=18%  Similarity=0.265  Sum_probs=65.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      .|+++||.|+ |++|...++.+... |++|+.+++++++++.+ +++..  +. ++  |..+ +.    .+.+.+..  .
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~lGa--~~-~i--~~~~-~~----~~~v~~~t~g~  238 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REVGA--DA-AV--KSGA-GA----ADAIRELTGGQ  238 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHTTC--SE-EE--ECST-TH----HHHHHHHHGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCC--CE-EE--cCCC-cH----HHHHHHHhCCC
Confidence            5899999998 99999988777666 78899999998877654 44442  22 22  2222 22    23333332  2


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      ++|++|.++|..                           ..++.++..+.  ..|+++.++...
T Consensus       239 g~d~v~d~~G~~---------------------------~~~~~~~~~l~--~~G~iv~~G~~~  273 (345)
T 3jv7_A          239 GATAVFDFVGAQ---------------------------STIDTAQQVVA--VDGHISVVGIHA  273 (345)
T ss_dssp             CEEEEEESSCCH---------------------------HHHHHHHHHEE--EEEEEEECSCCT
T ss_pred             CCeEEEECCCCH---------------------------HHHHHHHHHHh--cCCEEEEECCCC
Confidence            799999999741                           12344555553  358999887544

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.27  E-value=0.023  Score=46.64  Aligned_cols=77  Identities=13%  Similarity=0.214  Sum_probs=55.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           20 VALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +++|.|++|.+|+.+++.+.+. ++.++.+....+.++.+..   ...+   +..|++.++.+...+....+.  ++++|
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~~V   73 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHAV   73 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---TTCC---EEEECSCTTTHHHHHHHHHHT--TCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---cCCc---EEEEccChHHHHHHHHHHHHc--CCCEE
Confidence            5899999999999999999876 8888755443333444332   1233   345889999888888777665  88889


Q ss_pred             EECCCC
Q 023613           99 VNNAGI  104 (280)
Q Consensus        99 i~~ag~  104 (280)
                      |...|.
T Consensus        74 igTTG~   79 (245)
T 1p9l_A           74 VGTTGF   79 (245)
T ss_dssp             ECCCCC
T ss_pred             EcCCCC
Confidence            887763

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.25  E-value=0.035  Score=44.25  Aligned_cols=77  Identities=13%  Similarity=0.111  Sum_probs=53.1

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ..+..+++.|.| .|.+|.+++..|++.|++|++.+|+++        .-...++.++.+-   ...+..+++++.....
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~--------~~~~aD~vi~av~---~~~~~~v~~~l~~~~~   82 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ--------ATTLGEIVIMAVP---YPALAALAKQYATQLK   82 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC--------CSSCCSEEEECSC---HHHHHHHHHHTHHHHT
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH--------HhccCCEEEEcCC---cHHHHHHHHHHHHhcC
Confidence            356788899999 789999999999999999999999876        1123466665543   6677778887766544


Q ss_pred             CccEEEECCC
Q 023613           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~~d~li~~ag  103 (280)
                       -.++|+...
T Consensus        83 -~~~vi~~~~   91 (209)
T 2raf_A           83 -GKIVVDITN   91 (209)
T ss_dssp             -TSEEEECCC
T ss_pred             -CCEEEEECC
Confidence             335665544

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.22  E-value=0.0051  Score=51.46  Aligned_cols=72  Identities=17%  Similarity=0.280  Sum_probs=52.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++++|+++|.|+ |++|++++..|.+.|++|.+.+|+.++.+++.+...    +..  .+  +.   .       +....
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g----~~~--~~--~~---~-------~~~~~  186 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP----LEV--VN--SP---E-------EVIDK  186 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSC----EEE--CS--CG---G-------GTGGG
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcC----Cee--eh--hH---H-------hhhcC
Confidence            577999999996 699999999999999999999999887666544332    211  21  11   1       11237


Q ss_pred             ccEEEECCCCC
Q 023613           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 ~d~li~~ag~~  105 (280)
                      .|+||++.+..
T Consensus       187 aDiVi~atp~~  197 (275)
T 2hk9_A          187 VQVIVNTTSVG  197 (275)
T ss_dssp             CSEEEECSSTT
T ss_pred             CCEEEEeCCCC
Confidence            89999998764

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.20  E-value=0.2  Score=42.58  Aligned_cols=112  Identities=17%  Similarity=0.213  Sum_probs=71.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-C--CeEEEEecCcchHHH-HHHHhCCCCCeEEEec-CCCCHHHHHHHHHHHHHHcCC
Q 023613           20 VALITGGATGIGESTVRLFHKH-G--AKVCIADVQDNLGQQ-VCQSLGGEPDTFFCHC-DVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~-g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++.|+||+|.+|.+++..|++. +  ..+++.+.++ .... ..+..+......+... .-.+.++           +.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~-----------~~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA-----------LEG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHH-----------HTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHH-----------hCC
Confidence            5789999999999999999875 4  4689999887 3332 2232232222222211 1112322           248


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .|++|..||....+     ..+.   .+.++.|..-...+.+.+..+   ..++.+++++
T Consensus        70 aDivii~ag~~rkp-----G~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvt  118 (312)
T 3hhp_A           70 ADVVLISAGVARKP-----GMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIIT  118 (312)
T ss_dssp             CSEEEECCSCSCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             CCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEec
Confidence            99999999975431     2333   557777887777777777665   3457777776

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.20  E-value=0.031  Score=48.01  Aligned_cols=36  Identities=17%  Similarity=0.260  Sum_probs=31.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~   51 (280)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++++
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            478999999988 59999999999999965 7787765

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.19  E-value=0.0059  Score=52.29  Aligned_cols=76  Identities=17%  Similarity=0.231  Sum_probs=50.3

Q ss_pred             Cc-EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GR-VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k-~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      |+ ++||+||+|++|...++.+...|++|+++++++++++.+. .+..  .. ++  |..+.+  ...++++.  .+++|
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa--~~-v~--~~~~~~--~~~~~~~~--~~~~d  219 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGA--SE-VI--SREDVY--DGTLKALS--KQQWQ  219 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTC--SE-EE--EHHHHC--SSCCCSSC--CCCEE
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCC--cE-EE--ECCCch--HHHHHHhh--cCCcc
Confidence            54 8999999999999999988889999999999887766553 4442  22 22  211110  00011110  13699


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      ++|+++|
T Consensus       220 ~vid~~g  226 (330)
T 1tt7_A          220 GAVDPVG  226 (330)
T ss_dssp             EEEESCC
T ss_pred             EEEECCc
Confidence            9999997

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.18  E-value=0.0083  Score=51.02  Aligned_cols=68  Identities=10%  Similarity=0.055  Sum_probs=47.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|+++||.|+ |++|...++.+...|++|+.++ ++++.+.+ +++..  + .++  |  |   .+    ++   .+++|
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~lGa--~-~v~--~--d---~~----~v---~~g~D  201 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKRGV--R-HLY--R--E---PS----QV---TQKYF  201 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHHTE--E-EEE--S--S---GG----GC---CSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHcCC--C-EEE--c--C---HH----Hh---CCCcc
Confidence            5899999999 9999999988888899999999 77666554 44442  1 222  2  2   11    12   35899


Q ss_pred             EEEECCCC
Q 023613           97 IMVNNAGI  104 (280)
Q Consensus        97 ~li~~ag~  104 (280)
                      ++|.++|.
T Consensus       202 vv~d~~g~  209 (315)
T 3goh_A          202 AIFDAVNS  209 (315)
T ss_dssp             EEECC---
T ss_pred             EEEECCCc
Confidence            99999874

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.09  E-value=0.011  Score=50.04  Aligned_cols=73  Identities=19%  Similarity=0.270  Sum_probs=52.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++.||+++|.|+ |++|+++++.+...|++|++.+|+.++.+...+ ..    +..+..     +++.       +...
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g----~~~~~~-----~~l~-------~~l~  214 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MG----LVPFHT-----DELK-------EHVK  214 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT----CEEEEG-----GGHH-------HHST
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CC----CeEEch-----hhHH-------HHhh
Confidence            3688999999996 899999999999999999999999876554432 21    122211     1222       2234


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ..|+||++.+.
T Consensus       215 ~aDvVi~~~p~  225 (300)
T 2rir_A          215 DIDICINTIPS  225 (300)
T ss_dssp             TCSEEEECCSS
T ss_pred             CCCEEEECCCh
Confidence            88999999863

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.09  E-value=0.088  Score=45.39  Aligned_cols=118  Identities=12%  Similarity=0.115  Sum_probs=69.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCcc--hHHHHHHHh---CCCCCeEEEecCCCCHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-------KVCIADVQDN--LGQQVCQSL---GGEPDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-------~V~~~~r~~~--~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~   82 (280)
                      +++.-+|.|+||+|+||..++..|++...       .+.+.+.++.  .++-..-++   ...........+  +..   
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~~---   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DPR---   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CHH---
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--ChH---
Confidence            34567899999999999999999998643       5888887653  223222222   211222222221  221   


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           83 SAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                             +.+.+-|++|-.||....|     ..+.   .+.++.|..-.-.+.+.+..+-  .++.+|+.++
T Consensus        96 -------~a~~~advVvi~aG~prkp-----GmtR---~DLl~~Na~I~~~~~~~i~~~a--~~~~~vlvvs  150 (345)
T 4h7p_A           96 -------VAFDGVAIAIMCGAFPRKA-----GMER---KDLLEMNARIFKEQGEAIAAVA--ASDCRVVVVG  150 (345)
T ss_dssp             -------HHTTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             -------HHhCCCCEEEECCCCCCCC-----CCCH---HHHHHHhHHHHHHHHHHHHhhc--cCceEEEEeC
Confidence                   1235899999999986542     3454   4457777776666666655431  2334555554

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.08  E-value=0.01  Score=49.52  Aligned_cols=40  Identities=18%  Similarity=0.230  Sum_probs=35.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .+++||.++|.|.++-+|+.++..|...|++|.++.+...
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~  196 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR  196 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc
Confidence            3579999999999999999999999999999999877543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.08  E-value=0.056  Score=47.85  Aligned_cols=40  Identities=13%  Similarity=0.301  Sum_probs=35.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~   55 (280)
                      .+.||+++|.|.+ .||+.+|+.+...|++|+++++++...
T Consensus       217 ~L~GktV~ViG~G-~IGk~vA~~Lra~Ga~Viv~D~dp~ra  256 (435)
T 3gvp_A          217 MFGGKQVVVCGYG-EVGKGCCAALKAMGSIVYVTEIDPICA  256 (435)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             eecCCEEEEEeeC-HHHHHHHHHHHHCCCEEEEEeCChhhh
Confidence            5789999999985 699999999999999999999987543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.05  E-value=0.059  Score=45.41  Aligned_cols=111  Identities=12%  Similarity=0.106  Sum_probs=68.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC-----CCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG-----GEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+.|+|+ |.+|.+++..|++.|.  .|++.+++++.++.....+.     ......+...  +|.+           .+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH-----------Hh
Confidence            4789999 9999999999999987  89999999877653221111     1112222211  1221           22


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      ..-|++|..+|....+     ..+..   +.++.|..-...+.+.+..+   ..++.+++++-
T Consensus        68 ~~aDiVViaag~~~kp-----G~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~iivvsN  119 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP-----GMTRL---DLAHKNAGIIKDIAKKIVEN---APESKILVVTN  119 (294)
T ss_dssp             TTCSEEEECCCCCCCS-----SCCHH---HHHHHHHHHHHHHHHHHHTT---STTCEEEECSS
T ss_pred             CCCCEEEECCCCCCCC-----CCcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCC
Confidence            4889999999975432     23333   44666765555555555443   34577777763

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.05  E-value=0.012  Score=48.84  Aligned_cols=37  Identities=8%  Similarity=0.135  Sum_probs=34.4

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      +.||.++|.|++.-+|+.+++.|.+.|++|.++.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            7899999999999999999999999999999987654

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.05  E-value=0.025  Score=45.62  Aligned_cols=43  Identities=23%  Similarity=0.413  Sum_probs=37.2

Q ss_pred             CccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      =|...+++||.+||.||+ .+|...++.|.+.|++|++++.+..
T Consensus        23 ~Pifl~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVvap~~~   65 (223)
T 3dfz_A           23 YTVMLDLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVAPTVS   65 (223)
T ss_dssp             CEEEECCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred             cccEEEcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCC
Confidence            355668999999999975 8999999999999999999987653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.03  E-value=0.011  Score=51.27  Aligned_cols=81  Identities=17%  Similarity=0.168  Sum_probs=52.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcc-------------------hHHH---HHHHhCCCCCeE
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDN-------------------LGQQ---VCQSLGGEPDTF   69 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~-------------------~~~~---~~~~~~~~~~~~   69 (280)
                      ...|++++|+|.|+ ||+|.+++..|+..|.. +.+++++.-                   +.+.   ....+....++.
T Consensus       113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~  191 (353)
T 3h5n_A          113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVS  191 (353)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEE
Confidence            34578999999998 79999999999999964 888887632                   2222   223334444555


Q ss_pred             EEecCCCCHHHHHHHHHHHHHHcCCccEEEECC
Q 023613           70 FCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA  102 (280)
Q Consensus        70 ~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~a  102 (280)
                      .+..++.+..++       .+ +.+.|+||.+.
T Consensus       192 ~~~~~i~~~~~~-------~~-~~~~DlVvd~~  216 (353)
T 3h5n_A          192 EIALNINDYTDL-------HK-VPEADIWVVSA  216 (353)
T ss_dssp             EEECCCCSGGGG-------GG-SCCCSEEEECC
T ss_pred             EeecccCchhhh-------hH-hccCCEEEEec
Confidence            666666554321       12 35778777765

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.03  E-value=0.093  Score=44.91  Aligned_cols=112  Identities=13%  Similarity=0.142  Sum_probs=72.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +..++.|+|+ |.+|..++..|+..+.  .|++.+.++++++.....+...    ..+.+.. |  +.+           
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~-----------   72 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYS-----------   72 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------
Confidence            4568999999 9999999999998875  6999999887776654444321    2233322 2  211           


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .+..-|++|..+|....+     ..+.   .+.+..|..-...+.+.+..+   ..++.+++++
T Consensus        73 a~~~aDvVii~ag~~~k~-----g~~R---~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~t  125 (326)
T 2zqz_A           73 DAKDADLVVITAGAPQKP-----GETR---LDLVNKNLKILKSIVDPIVDS---GFNGIFLVAA  125 (326)
T ss_dssp             GGGGCSEEEECCCCC----------CH---HHHHHHHHHHHHHHHHHHHHH---TCCSEEEECS
T ss_pred             HhCCCCEEEEcCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeC
Confidence            124889999999975431     2333   245667776666666666654   3567888775

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.97  E-value=0.025  Score=47.75  Aligned_cols=81  Identities=14%  Similarity=0.154  Sum_probs=54.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .+++.|.||.|.+|.++++.|.+.|++|++.+|+++..  ..+.+. ..++.++.+-..   .+..+++++.....+=.+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~~-~aDvVilavp~~---~~~~vl~~l~~~l~~~~i   94 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESILA-NADVVIVSVPIN---LTLETIERLKPYLTENML   94 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHHT-TCSEEEECSCGG---GHHHHHHHHGGGCCTTSE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHhc-CCCEEEEeCCHH---HHHHHHHHHHhhcCCCcE
Confidence            45789999999999999999999999999999986531  112222 356677655433   356667766544332235


Q ss_pred             EEECCCC
Q 023613           98 MVNNAGI  104 (280)
Q Consensus        98 li~~ag~  104 (280)
                      |+..+++
T Consensus        95 v~~~~sv  101 (298)
T 2pv7_A           95 LADLTSV  101 (298)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            5555543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.97  E-value=0.063  Score=44.87  Aligned_cols=42  Identities=12%  Similarity=0.241  Sum_probs=37.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   60 (280)
                      +++.|.|++|.+|.++++.|++.|++|++.+|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            479999999999999999999999999999999877666543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.97  E-value=0.011  Score=50.50  Aligned_cols=73  Identities=21%  Similarity=0.361  Sum_probs=49.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      |+ +||+||+|++|...++.+...|++|+++++++++.+.+. ++..  +..+-.-|...       ++++  ..+++|+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa--~~vi~~~~~~~-------~~~~--~~~~~d~  214 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGA--NRILSRDEFAE-------SRPL--EKQLWAG  214 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTC--SEEEEGGGSSC-------CCSS--CCCCEEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCC--CEEEecCCHHH-------HHhh--cCCCccE
Confidence            45 999999999999999988889999999999988776654 4442  22221122111       1111  1147999


Q ss_pred             EEECCC
Q 023613           98 MVNNAG  103 (280)
Q Consensus        98 li~~ag  103 (280)
                      +|.++|
T Consensus       215 v~d~~g  220 (324)
T 3nx4_A          215 AIDTVG  220 (324)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999876

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.97  E-value=0.013  Score=49.32  Aligned_cols=71  Identities=20%  Similarity=0.312  Sum_probs=50.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ++.||+++|.|+ |+||+++++.+...|++|++.+|+.+..+... ...    +..+  +.   +++.+       ....
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g----~~~~--~~---~~l~~-------~l~~  213 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMG----MEPF--HI---SKAAQ-------ELRD  213 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTT----SEEE--EG---GGHHH-------HTTT
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCC----Ceec--Ch---hhHHH-------HhcC
Confidence            578999999995 89999999999999999999999887654432 222    1222  11   12222       2347


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      .|+++++..
T Consensus       214 aDvVi~~~p  222 (293)
T 3d4o_A          214 VDVCINTIP  222 (293)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEECCC
Confidence            899999874

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.95  E-value=0.082  Score=43.54  Aligned_cols=86  Identities=13%  Similarity=0.210  Sum_probs=58.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhC-----------CCCCeEEEecCCCCHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLG-----------GEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~   83 (280)
                      +.+.++.|.|+ |.+|..+++.|++.|++ |.+.+|+++..+.+.+...           ...++.++.   .....+..
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a---v~~~~~~~   83 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS---LKDSAFAE   83 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC---CCHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe---cCHHHHHH
Confidence            44557889987 89999999999999998 8899999888777655421           112333332   23445677


Q ss_pred             HHHHHHHHcCCccEEEECCCCC
Q 023613           84 AVDLTVEKFGTLDIMVNNAGIS  105 (280)
Q Consensus        84 ~~~~~~~~~~~~d~li~~ag~~  105 (280)
                      +++.+.+...+=.++|++.+..
T Consensus        84 v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           84 LLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHHhhcCCCcEEEECCCCC
Confidence            7777765433334677776543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.95  E-value=0.012  Score=50.59  Aligned_cols=71  Identities=17%  Similarity=0.189  Sum_probs=54.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .+.++|.|+ +.+|+.+++.|.++|. |++++++++..+ +.+     ..+.++..|.++++.++++      ...+.|.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-----~~~~~i~gd~~~~~~L~~a------~i~~a~~  180 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-----SGANFVHGDPTRVSDLEKA------NVRGARA  180 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-----TTCEEEESCTTSHHHHHHT------CSTTEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-----CCcEEEEeCCCCHHHHHhc------ChhhccE
Confidence            457899996 8999999999999999 999999998776 432     2467888999998776533      1136777


Q ss_pred             EEECC
Q 023613           98 MVNNA  102 (280)
Q Consensus        98 li~~a  102 (280)
                      +|...
T Consensus       181 vi~~~  185 (336)
T 1lnq_A          181 VIVDL  185 (336)
T ss_dssp             EEECC
T ss_pred             EEEcC
Confidence            77655

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.94  E-value=0.012  Score=49.19  Aligned_cols=38  Identities=18%  Similarity=0.291  Sum_probs=34.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      +++||.++|.|.++-+|+.+++.|...|++|.++.|+.
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  195 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT  195 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            68999999999999999999999999999999887643

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.93  E-value=0.093  Score=44.39  Aligned_cols=109  Identities=11%  Similarity=0.171  Sum_probs=65.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++.|+|+ |.+|..++..|+..|.  .|++.+++++.++.....+...    ....+...   +.+           .+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~---~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHG---GHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEE---CGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEEC---CHH-----------HhC
Confidence            5789998 9999999999999998  8999999987666544444321    12222211   211           224


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .-|++|.++|....+     ..+   -.+.+..|+.-...+.+.+.++   ..++.+++++
T Consensus        67 ~aDvVIi~~~~~~~~-----g~~---r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~t  116 (304)
T 2v6b_A           67 DAQVVILTAGANQKP-----GES---RLDLLEKNADIFRELVPQITRA---APDAVLLVTS  116 (304)
T ss_dssp             TCSEEEECC--------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECS
T ss_pred             CCCEEEEcCCCCCCC-----CCc---HHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEec
Confidence            889999999865321     111   2235566666666666666665   2456666654

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.91  E-value=0.16  Score=43.04  Aligned_cols=109  Identities=14%  Similarity=0.172  Sum_probs=72.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++.|+|+ |.+|..++..|+..+  ..+++.+.++++++.....+...    ..+.+.. |  +.+           .+.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~-----------a~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG-----------DLE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH-----------HhC
Confidence            5889998 999999999999887  57999999987777644444321    1223322 2  222           135


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .-|++|..+|....+     ..+..   +.+..|..-...+.+.+..+   ..++.+++++
T Consensus        67 ~aD~Vii~ag~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~t  116 (310)
T 2xxj_A           67 GARAVVLAAGVAQRP-----GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVAT  116 (310)
T ss_dssp             TEEEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECS
T ss_pred             CCCEEEECCCCCCCC-----CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEec
Confidence            899999999975432     23333   34666766666666666654   4567888775

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.90  E-value=0.012  Score=50.58  Aligned_cols=114  Identities=16%  Similarity=0.133  Sum_probs=67.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHh-------CCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSL-------GGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+++.|+|| |.+|.+++..|++.|. +|++.+++++.++.....+       ....++.. .   +|.+.         
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~e---------   74 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYEA---------   74 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHHH---------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHHH---------
Confidence            357889998 9999999999999998 8999999987766532222       11122222 1   23221         


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCC--CCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIRE--ADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                       .+..-|++|..+|....+  ..+.  .+.   .+.+..|..-...+.+.+.++   ..++.+++++
T Consensus        75 -a~~~aDiVi~a~g~p~~~--g~~~~~~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~vi~~t  132 (331)
T 1pzg_A           75 -ALTGADCVIVTAGLTKVP--GKPDSEWSR---NDLLPFNSKIIREIGQNIKKY---CPKTFIIVVT  132 (331)
T ss_dssp             -HHTTCSEEEECCSCSSCT--TCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             -HhCCCCEEEEccCCCCCC--CcccCCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEEc
Confidence             123889999999875431  1100  011   223455555555555555554   2345666554

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.87  E-value=0.015  Score=48.94  Aligned_cols=39  Identities=23%  Similarity=0.374  Sum_probs=35.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      .+++||.++|.|.++-+|+.++..|.+.|++|.++.|..
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            358999999999999999999999999999999988743

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.87  E-value=0.11  Score=44.55  Aligned_cols=113  Identities=11%  Similarity=-0.017  Sum_probs=73.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCC----CCCeEE-EecCCCCHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGG----EPDTFF-CHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~-~~~D~~~~~~~~~~~~~~~   89 (280)
                      ..+.+.|+|+ |.+|..++..|+..|.  .|++.+.+++.++.....+..    .....+ ...|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            3567899999 9999999999999986  799999988766654333321    111122 2334432            


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                        +..-|++|-.||....+     ..+.   .+.+..|..-.-.+.+.+..+   ..++.+++++-
T Consensus        87 --~~daDiVIitaG~p~kp-----G~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtN  139 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQE-----GESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPE  139 (330)
T ss_dssp             --CSSCSEEEECCSCCCCS-----SCCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSS
T ss_pred             --hCCCCEEEEeCCCCCCC-----CCCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCC
Confidence              24889999999986432     1222   235666666666666666654   34577777763

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.87  E-value=0.059  Score=45.98  Aligned_cols=111  Identities=14%  Similarity=0.118  Sum_probs=69.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCC----CeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEP----DTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ..++.|+|+ |.+|..++..|+..|.  .|++.+.++++++.....+....    .+.+. .  .+.           +.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------SD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------HH
Confidence            346888898 9999999999999987  79999998876665444443221    22221 1  111           12


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      +..-|++|..+|....+     ..+.   .+.+..|+.-...+.+.+.++   ..++.+++++
T Consensus        72 ~~~aDvVii~~g~p~k~-----g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~t  123 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRKP-----GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVS  123 (318)
T ss_dssp             GTTCSEEEECCCC-----------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECS
T ss_pred             hCCCCEEEEcCCCCCCC-----CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEec
Confidence            35899999999975321     2232   345777777777777777765   3457777754

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.85  E-value=0.11  Score=44.33  Aligned_cols=111  Identities=14%  Similarity=0.164  Sum_probs=68.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ...+.|+|+ |.+|..++..|+..+.  .+++.+.++++++.....+...    ..+.+.. |  +.           +.
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~-----------~a   69 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EY-----------SD   69 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CH-----------HH
Confidence            357999998 9999999999998875  6999999887776544444221    2233322 2  21           12


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      +..-|++|..+|....+     ..+   -.+.+..|..-...+.+.+..+   ..++.+++++
T Consensus        70 ~~~aDvVii~ag~~~~~-----g~~---R~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~t  121 (318)
T 1ez4_A           70 CKDADLVVITAGAPQKP-----GES---RLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAA  121 (318)
T ss_dssp             GTTCSEEEECCCC------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             hCCCCEEEECCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEeC
Confidence            35899999999975432     112   1234566666666656655554   3567888765

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.83  E-value=0.047  Score=50.42  Aligned_cols=37  Identities=16%  Similarity=0.253  Sum_probs=31.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD   52 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~   52 (280)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++.+.
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            478999999988 59999999999999965 88887753

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.82  E-value=0.083  Score=44.79  Aligned_cols=40  Identities=23%  Similarity=0.236  Sum_probs=36.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      .++.||++.|.|. |.||+.+|+.+...|++|++.+|+.+.
T Consensus       138 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~  177 (307)
T 1wwk_A          138 IELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE  177 (307)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             cccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            4689999999975 899999999999999999999998765

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.81  E-value=0.037  Score=49.12  Aligned_cols=72  Identities=14%  Similarity=0.147  Sum_probs=53.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .-+.+|+++|.|++ -+|+.+++.+.+.|++|++++.+++....   ...   + ..+..|..|.+.+.++++       
T Consensus        31 ~~~~~~~IlIlG~G-~lg~~~~~aa~~lG~~v~v~d~~~~~p~~---~~a---d-~~~~~~~~d~~~l~~~a~-------   95 (419)
T 4e4t_A           31 PILPGAWLGMVGGG-QLGRMFCFAAQSMGYRVAVLDPDPASPAG---AVA---D-RHLRAAYDDEAALAELAG-------   95 (419)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCTTCHHH---HHS---S-EEECCCTTCHHHHHHHHH-------
T ss_pred             cCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCcCchh---hhC---C-EEEECCcCCHHHHHHHHh-------
Confidence            34689999999875 69999999999999999998876542221   111   1 245578889988877773       


Q ss_pred             CccEEEE
Q 023613           94 TLDIMVN  100 (280)
Q Consensus        94 ~~d~li~  100 (280)
                      ++|+++.
T Consensus        96 ~~D~V~~  102 (419)
T 4e4t_A           96 LCEAVST  102 (419)
T ss_dssp             HCSEEEE
T ss_pred             cCCEEEE
Confidence            6888873

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.80  E-value=0.18  Score=42.82  Aligned_cols=112  Identities=13%  Similarity=0.117  Sum_probs=70.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCC----C-CCeEEEecCCCCHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGG----E-PDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +...+.|+|+ |.+|..++..|+..|.  .|++.+.++++++.....+..    . ..+.+.. |  +.+          
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~----------   70 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYS----------   70 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHH----------
Confidence            3457889998 9999999999998884  799999987655543222211    1 1222222 2  211          


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                       .+.+-|++|..+|....+     ..+..   +.+..|..-...+.+.+.++   ..++.+++++
T Consensus        71 -a~~~aDvVvi~ag~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~t  123 (317)
T 3d0o_A           71 -DCHDADLVVICAGAAQKP-----GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVAT  123 (317)
T ss_dssp             -GGTTCSEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             -HhCCCCEEEECCCCCCCC-----CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEec
Confidence             234899999999975431     23332   44666666666666666554   3457777754

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.79  E-value=0.0029  Score=56.00  Aligned_cols=46  Identities=15%  Similarity=0.211  Sum_probs=37.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEE-EEec----------CcchHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVC-IADV----------QDNLGQQVCQS   61 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~-~~~r----------~~~~~~~~~~~   61 (280)
                      +++||+++|+| .|.+|+.+|+.|.+.|++|+ +.++          +.+.+.+..+.
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            68899999998 88999999999999999998 6777          44555555544

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.78  E-value=0.063  Score=46.03  Aligned_cols=79  Identities=15%  Similarity=0.180  Sum_probs=50.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeE-EEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|+++||.|+ |++|...++.+...|+.+ +.+++++++++. .+++..  . .++..+-.+..   +..+.+. .....
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a~~lGa--~-~~i~~~~~~~~---~~~~~~~-~~~g~  230 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-AKSFGA--M-QTFNSSEMSAP---QMQSVLR-ELRFN  230 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHTTC--S-EEEETTTSCHH---HHHHHHG-GGCSS
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-HHHcCC--e-EEEeCCCCCHH---HHHHhhc-ccCCc
Confidence            6899999987 899999988888889885 567777776554 445542  2 22222222222   2233332 22578


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |+++.++|.
T Consensus       231 d~v~d~~G~  239 (346)
T 4a2c_A          231 QLILETAGV  239 (346)
T ss_dssp             EEEEECSCS
T ss_pred             ccccccccc
Confidence            999999874

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.77  E-value=0.061  Score=44.94  Aligned_cols=83  Identities=12%  Similarity=0.089  Sum_probs=58.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC---eEEEEecCcchHHHHHHHhC-----------CCCCeEEEecCCCCHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA---KVCIADVQDNLGQQVCQSLG-----------GEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~---~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~   83 (280)
                      .+++.|.|+ |.+|.++++.|++.|+   +|++.+|+++..+.+.+..+           ...++.++.+   .++.+..
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            356778877 8999999999999998   89999999988877765421           1235555544   3466777


Q ss_pred             HHHHHHHH-cCCccEEEECCCC
Q 023613           84 AVDLTVEK-FGTLDIMVNNAGI  104 (280)
Q Consensus        84 ~~~~~~~~-~~~~d~li~~ag~  104 (280)
                      +++++... ..+=.++|.+++.
T Consensus        79 vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHhhccCCCeEEEEecCC
Confidence            77777765 4332377776543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.76  E-value=0.017  Score=49.67  Aligned_cols=77  Identities=21%  Similarity=0.267  Sum_probs=48.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC--
Q 023613           17 VGRVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   93 (280)
                      .|.++||.|+ +++|...+..+... |++|+.+++++++++.. +.+..  ... +  |..+.+.    .+++.+..+  
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~-~~~Ga--~~~-i--~~~~~~~----~~~v~~~t~g~  231 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA-KKIGA--DVT-I--NSGDVNP----VDEIKKITGGL  231 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH-HHTTC--SEE-E--EC-CCCH----HHHHHHHTTSS
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhh-hhcCC--eEE-E--eCCCCCH----HHHhhhhcCCC
Confidence            5899999987 67777777777665 78899999998876543 34432  222 2  3333332    233444332  


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|.++.+++.
T Consensus       232 g~d~~~~~~~~  242 (348)
T 4eez_A          232 GVQSAIVCAVA  242 (348)
T ss_dssp             CEEEEEECCSC
T ss_pred             CceEEEEeccC
Confidence            57888888763

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.76  E-value=0.016  Score=47.92  Aligned_cols=69  Identities=17%  Similarity=0.261  Sum_probs=52.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+....    .   .  .+.       ++   . ..
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~----~---~--~~~-------~~---~-~~  171 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGL----R---A--VPL-------EK---A-RE  171 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTC----E---E--CCG-------GG---G-GG
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcc----c---h--hhH-------hh---c-cC
Confidence            5778 8999997 7799999999999999999999998887777665542    1   1  111       11   1 27


Q ss_pred             ccEEEECCCCC
Q 023613           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 ~d~li~~ag~~  105 (280)
                      .|+||++.+..
T Consensus       172 ~Divi~~tp~~  182 (263)
T 2d5c_A          172 ARLLVNATRVG  182 (263)
T ss_dssp             CSEEEECSSTT
T ss_pred             CCEEEEccCCC
Confidence            89999998764

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.72  E-value=0.019  Score=48.01  Aligned_cols=41  Identities=12%  Similarity=0.106  Sum_probs=36.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~   55 (280)
                      +++||.++|.|++.-+|+.+++.|...|++|.++.+....+
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L  196 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL  196 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            68999999999999999999999999999999987665433

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.70  E-value=0.02  Score=51.61  Aligned_cols=72  Identities=13%  Similarity=0.163  Sum_probs=54.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      .++|.|+ |.+|+.+|+.|.++|+.|++++++++.++.+.+.+    .+.++..|.++++-++++      ...+-|.+|
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----~~~~i~Gd~~~~~~L~~A------gi~~ad~~i   73 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----DLRVVNGHASHPDVLHEA------GAQDADMLV   73 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----SCEEEESCTTCHHHHHHH------TTTTCSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----CcEEEEEcCCCHHHHHhc------CCCcCCEEE
Confidence            4677776 68999999999999999999999999888776654    356788899888765432      113667776


Q ss_pred             ECC
Q 023613          100 NNA  102 (280)
Q Consensus       100 ~~a  102 (280)
                      ...
T Consensus        74 a~t   76 (461)
T 4g65_A           74 AVT   76 (461)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.67  E-value=0.14  Score=43.42  Aligned_cols=72  Identities=14%  Similarity=0.172  Sum_probs=49.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-------CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-------EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++.|+|+ |.+|..++..|+..|. +|++.++++++++.....+..       ..++.. ..|.   +           
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d~---~-----------   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-TNNY---A-----------   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-CCCH---H-----------
Confidence            46899999 9999999999999996 899999998777654443322       112221 1232   1           


Q ss_pred             HcCCccEEEECCCCCC
Q 023613           91 KFGTLDIMVNNAGISG  106 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~  106 (280)
                      .+..-|++|..+|...
T Consensus        67 a~~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           67 DTANSDVIVVTSGAPR   82 (309)
T ss_dssp             GGTTCSEEEECCCC--
T ss_pred             HHCCCCEEEEcCCCCC
Confidence            1248899999999754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.65  E-value=0.63  Score=42.44  Aligned_cols=150  Identities=11%  Similarity=0.087  Sum_probs=93.9

Q ss_pred             ccCCcEEEEEcCCC-hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH-HHc
Q 023613           15 RLVGRVALITGGAT-GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV-EKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~-giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~   92 (280)
                      .+.|.+.++..... +++..++..|.++|.+|+.+.....                      .+.+++.+.+.+.. ...
T Consensus        47 ~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~----------------------~~~~~~~~~l~~~~~~~~  104 (525)
T 3qp9_A           47 GLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL----------------------GDRQRLAATLGEALAAAG  104 (525)
T ss_dssp             CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT----------------------CCHHHHHHHHHHHHHHTT
T ss_pred             CCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC----------------------CCHHHHHHHHHhhhhccc
Confidence            45577777765543 3889999999999999877644321                      15666666665332 445


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +.++.|+|..+.-..+........        ...+.+.+.+.|++...   ....++..++..+.... +.-..-...+
T Consensus       105 ~~~~~v~~l~~~~~~~~~~~~~~~--------~~g~~~~l~l~qal~~~---~~~~~l~~vT~ga~~~~-~~~~~~~p~~  172 (525)
T 3qp9_A          105 GAVDGVLSLLAWDESAHPGHPAPF--------TRGTGATLTLVQALEDA---GVAAPLWCVTHGAVSVG-RADHVTSPAQ  172 (525)
T ss_dssp             SCCSEEEECGGGCCCBCTTSCTTC--------BHHHHHHHHHHHHHHHT---TCCSCEEEEEESCCCCB-TTBCCSCHHH
T ss_pred             CCCCeEEEcccCCCCccccccccc--------cchHHHHHHHHHHHHhc---CCCCcEEEEECCCEeCC-CCCCCCCHHH
Confidence            678999999876432111111111        14466778888887653   22356777765443222 1112235779


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSP  198 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~p  198 (280)
                      +++-+|.|.++.|+...-++...+-+
T Consensus       173 a~l~Gl~r~~~~E~p~~~~~~vDl~~  198 (525)
T 3qp9_A          173 AMVWGMGRVAALEHPERWGGLIDLPS  198 (525)
T ss_dssp             HHHHHHHHHHHHHSTTTEEEEEEECS
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEcCC
Confidence            99999999999999875555666543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.62  E-value=0.024  Score=50.84  Aligned_cols=38  Identities=29%  Similarity=0.398  Sum_probs=34.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      .++++|.++|.|. ++.|.++|+.|.++|++|.+.+++.
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            4578999999999 7899999999999999999999865

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.61  E-value=0.0094  Score=50.23  Aligned_cols=40  Identities=25%  Similarity=0.243  Sum_probs=35.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      .++.||++.|.|. |.||+++|+.|...|++|+..+|+.+.
T Consensus       118 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~  157 (290)
T 3gvx_A          118 TLLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVD  157 (290)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCC
T ss_pred             eeeecchheeecc-CchhHHHHHHHHhhCcEEEEEeccccc
Confidence            4689999999985 799999999999999999999998654

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.60  E-value=0.019  Score=48.30  Aligned_cols=39  Identities=21%  Similarity=0.311  Sum_probs=35.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      ++.||.++|.|++.-+|+.+++.|...|++|.++.+...
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~  200 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA  200 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc
Confidence            689999999999999999999999999999999876543

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.60  E-value=0.039  Score=47.79  Aligned_cols=42  Identities=17%  Similarity=0.203  Sum_probs=36.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ   56 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~   56 (280)
                      .++.||++.|.|. |.||+++|+.|...|++|+..+|+....+
T Consensus       160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~  201 (351)
T 3jtm_A          160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPE  201 (351)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHH
T ss_pred             ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHH
Confidence            4689999999985 68999999999999999999998864443

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.56  E-value=0.018  Score=50.24  Aligned_cols=72  Identities=18%  Similarity=0.196  Sum_probs=50.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++.||++.|.|. |.||+++|+.|...|++ |+..+|+....+.. ....    +.  .+  .+   ++++++      
T Consensus       160 ~~l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~-~~~g----~~--~~--~~---l~ell~------  220 (364)
T 2j6i_A          160 YDIEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAE-EKVG----AR--RV--EN---IEELVA------  220 (364)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH-HHTT----EE--EC--SS---HHHHHH------
T ss_pred             ccCCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHH-HhcC----cE--ec--CC---HHHHHh------
Confidence            4689999999975 89999999999999997 99999887544332 2221    11  11  12   222333      


Q ss_pred             CCccEEEECCCCC
Q 023613           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 ~~~d~li~~ag~~  105 (280)
                       .-|+|+.+....
T Consensus       221 -~aDvV~l~~P~t  232 (364)
T 2j6i_A          221 -QADIVTVNAPLH  232 (364)
T ss_dssp             -TCSEEEECCCCS
T ss_pred             -cCCEEEECCCCC
Confidence             789999988654

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.45  E-value=0.13  Score=43.77  Aligned_cols=84  Identities=13%  Similarity=0.120  Sum_probs=54.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHH---------hC----CCCCeEEEecCCCCHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQS---------LG----GEPDTFFCHCDVTKEEDV   81 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~---------~~----~~~~~~~~~~D~~~~~~~   81 (280)
                      ..+++.|.| .|.+|.++++.|.+.|+  +|++.+|+++..+...+.         ..    ...++.++.+-.   ..+
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~---~~~  107 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPV---RTF  107 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCG---GGH
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCH---HHH
Confidence            347889998 79999999999999999  899999998776654321         00    123445544332   235


Q ss_pred             HHHHHHHHHHcCCccEEEECCCC
Q 023613           82 CSAVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        82 ~~~~~~~~~~~~~~d~li~~ag~  104 (280)
                      ..+++++.....+=-+|+.++++
T Consensus       108 ~~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          108 REIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             HHHHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHHhhccCCCcEEEECCCC
Confidence            55666666554333355555443

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.44  E-value=0.02  Score=49.67  Aligned_cols=39  Identities=21%  Similarity=0.187  Sum_probs=35.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .++.||++.|.|. |.||+++|+.+...|++|+..+|+..
T Consensus       156 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~  194 (352)
T 3gg9_A          156 RVLKGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGRENS  194 (352)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHHH
T ss_pred             ccCCCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCCC
Confidence            5689999999986 79999999999999999999998753

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.42  E-value=0.097  Score=45.79  Aligned_cols=70  Identities=17%  Similarity=0.201  Sum_probs=50.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      -+.+|+++|.|++. +|+.+++.+.+.|++|++++.+.....      ....+ ..+..|..|.+.+.++++       .
T Consensus        11 ~~~~k~IlIlG~G~-~g~~la~aa~~~G~~vi~~d~~~~~~~------~~~ad-~~~~~~~~d~~~l~~~~~-------~   75 (389)
T 3q2o_A           11 ILPGKTIGIIGGGQ-LGRMMALAAKEMGYKIAVLDPTKNSPC------AQVAD-IEIVASYDDLKAIQHLAE-------I   75 (389)
T ss_dssp             CCTTSEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSTTCTT------TTTCS-EEEECCTTCHHHHHHHHH-------T
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCCCCch------HHhCC-ceEecCcCCHHHHHHHHH-------h
Confidence            36899999998774 999999999999999999987653210      00112 234578888888777665       4


Q ss_pred             ccEEE
Q 023613           95 LDIMV   99 (280)
Q Consensus        95 ~d~li   99 (280)
                      .|++.
T Consensus        76 ~dvI~   80 (389)
T 3q2o_A           76 SDVVT   80 (389)
T ss_dssp             CSEEE
T ss_pred             CCEee
Confidence            67663

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=95.40  E-value=0.092  Score=45.17  Aligned_cols=39  Identities=15%  Similarity=0.066  Sum_probs=35.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .++.||++.|.|. |.||+++|+.+...|++|+..+|+..
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  205 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTL  205 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcc
Confidence            4789999999987 79999999999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	280
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-75
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	8e-75
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-71
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	5e-69
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-68
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-68
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-67
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-64
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-64
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	7e-64
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	8e-64
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-63
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-60
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-60
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-60
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-60
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-59
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-59
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-59
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-58
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-58
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-58
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-58
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-58
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	9e-58
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-57
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-57
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-57
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-57
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	8e-57
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-56
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-56
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-56
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-55
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-53
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-52
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-52
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-52
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	5e-52
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-51
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-51
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	7e-51
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-50
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	5e-50
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	9e-49
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-48
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-46
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-45
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-45
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	1e-42
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-41
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-40
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-40
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-39
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-39
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-38
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-37
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-36
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-33
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-33
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-33
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-32
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-27
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	2e-25
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-24
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-19
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-13
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-12
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	5e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.002
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.004

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  228 bits (582), Expect = 2e-75
 Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 12/257 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G+  L+TGGA GIG +  + F + GA V + D++   G++V +++GG     F   D
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA----FFQVD 56

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +  E +    V+      G +D++VNNA I+           L E+ +V ++N+    H 
Sbjct: 57  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTAPMHL 114

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              AAR M     G I+++ SV G        AY  SK  ++ L +++A +L    IRVN
Sbjct: 115 SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVN 174

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V+P A+AT   L  +      E     + +  A             +VA AVLFLAS++
Sbjct: 175 AVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA-----LRRLGKPEEVAEAVLFLASEK 229

Query: 255 ARYISGTNLMVDGGFTS 271
           A +I+G  L VDGG T+
Sbjct: 230 ASFITGAILPVDGGMTA 246

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  227 bits (580), Expect = 8e-75
 Identities = 126/263 (47%), Positives = 169/263 (64%), Gaps = 7/263 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL  +VA+ITGGA GIGE+T +LF ++GAKV IAD+ D+ GQ+VC ++G      F HCD
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VTK+EDV + VD T+ K G LDIM  N G+       I EA   +F++V DINV G F  
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHA-YTGSKHAVLGLNKNVAAELGKYGIRV 193
            KHAAR+MIP  KG+I+   S++    G G    YT +KHAVLGL  ++  ELG+YGIRV
Sbjct: 123 AKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRV 182

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NCVSPY VA+ L       +    + +        + AN++GT L A DVA+AV +LA D
Sbjct: 183 NCVSPYIVASPLLTDVFGVDSSRVEEL------AHQAANLKGTLLRAEDVADAVAYLAGD 236

Query: 254 EARYISGTNLMVDGGFTSVNHSL 276
           E++Y+SG NL++DGG+T  N + 
Sbjct: 237 ESKYVSGLNLVIDGGYTRTNPAF 259

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  217 bits (555), Expect = 2e-71
 Identities = 82/258 (31%), Positives = 117/258 (45%), Gaps = 14/258 (5%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGEPDTFFCH 72
           QRL  ++A+ITGGA GIG +    F   GA + IAD+      +   ++LG         
Sbjct: 1   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR--VLTVK 58

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV++  DV +     +  FG  DI+VNNAGI   P     E    +++K F+INV   F
Sbjct: 59  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGI--YPLIPFDELTFEQWKKTFEINVDSGF 116

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
              K     M     G II++ S    +       Y  +K A +G  + +A++LGK GI 
Sbjct: 117 LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGIT 176

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P  V T    A         D +      + R            D+  A  FLAS
Sbjct: 177 VNAIAPSLVRTATTEASALSAM--FDVLPNMLQAIPRLQ-------VPLDLTGAAAFLAS 227

Query: 253 DEARYISGTNLMVDGGFT 270
           D+A +I+G  L VDGG  
Sbjct: 228 DDASFITGQTLAVDGGMV 245

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  212 bits (540), Expect = 5e-69
 Identities = 87/260 (33%), Positives = 127/260 (48%), Gaps = 17/260 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL+TGGA+G+G   V+L    GAKV  +D+ +  GQQ+   LG    + F   D
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER--SMFVRHD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+ E D    +     + GTL+++VNNAGI      D+    L +F ++  IN + VF G
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIG 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK--YGIR 192
            +     M  +T G+II++ SV+  +       Y+ SK AV  L +  A    K  Y IR
Sbjct: 119 CQQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLFL 250
           VN + P  + T +  A LP+    E         V  +  +   G       +A  VLFL
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSKE--------MVLHDPKLNRAGRAYMPERIAQLVLFL 229

Query: 251 ASDEARYISGTNLMVDGGFT 270
           ASDE+  +SG+ L  D    
Sbjct: 230 ASDESSVMSGSELHADNSIL 249

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  210 bits (535), Expect = 3e-68
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 15/260 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VA+ITGG  GIG +    F + GAKV I     ++G++  +S+G      F   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
            + E+      D T + FG +  +VNNAGI+      + E   +E+ K+  +N+ GVF G
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 135 MKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAE--LGKYGI 191
            +   + M  +  G +II++ S+ G +G     AY  SK AV  ++K+ A +  L  Y +
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V P  + T L       EE              R     G     ND+A   ++LA
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAEEAMS----------QRTKTPMGHIGEPNDIAYICVYLA 230

Query: 252 SDEARYISGTNLMVDGGFTS 271
           S+E+++ +G+  +VDGG+T+
Sbjct: 231 SNESKFATGSEFVVDGGYTA 250

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  210 bits (536), Expect = 3e-68
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 9/263 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----GGEPDTFF 70
           R   +VA+ITG + GIG +T  LF + GAKV I        ++  Q +      E +   
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINV 128
              DVT +      +  T+ KFG LDI+VNNAG +   +         +  ++   ++N+
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           + V    K A   +       +      +G         Y+ +K A+    +N A +L +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
           +GIRVN +SP  VATG   A    EE ++                 G      D+A  + 
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP--AGVMGQPQDIAEVIA 239

Query: 249 FLASDE-ARYISGTNLMVDGGFT 270
           FLA  + + YI G  L+VDGG +
Sbjct: 240 FLADRKTSSYIIGHQLVVDGGSS 262

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  207 bits (529), Expect = 2e-67
 Identities = 87/259 (33%), Positives = 131/259 (50%), Gaps = 17/259 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           R  G+V ++TGG  GIG   VR F   GA+V I D  ++ G+ + Q L G     F  CD
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG---AVFILCD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+E+DV + V  T+ +FG LD +VNNAG    P     E     F ++ ++N+ G +  
Sbjct: 60  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLGTYTL 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A   +  +++G +I+I S+ GAIG      Y  +K AV  + K +A +   YG+RVN
Sbjct: 119 TKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 177

Query: 195 CVSPYAVATGL---ALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           C+SP  + T L     A +P+   +    +         A   G      +V  A +FLA
Sbjct: 178 CISPGNIWTPLWEELAALMPDPRASIREGM--------LAQPLGRMGQPAEVGAAAVFLA 229

Query: 252 SDEARYISGTNLMVDGGFT 270
           S+ A + +G  L+V GG  
Sbjct: 230 SE-ANFCTGIELLVTGGAE 247

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  201 bits (513), Expect = 1e-64
 Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 13/267 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----GGEPDTFF 70
           R   +  +ITG + GIG +T  LF + GA V I        ++  Q +      E     
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINV 128
              DVT E+     ++ T+++FG +D++VNNAG +   A      +  +  + K   +N+
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
           + V    K     ++      +     VAG         Y  +K A+    ++ A +L K
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANA 246
           +GIRVN VSP  V TG   A    ++ ++     F NF+A +      G       +AN 
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQK----FYNFMASHKECIPIGAAGKPEHIANI 237

Query: 247 VLFLASDEA-RYISGTNLMVDGGFTSV 272
           +LFLA      YI G +++ DGG + V
Sbjct: 238 ILFLADRNLSFYILGQSIVADGGTSLV 264

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (509), Expect = 3e-64
 Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 22/269 (8%)

Query: 9   SSPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV---CQSLGGE 65
           + P ++R   R+AL+TG + GIG +  R   + G KV          +++   C+S G  
Sbjct: 1   ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP 60

Query: 66  PDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFD 125
                  CD++ EED+ S       +   +DI +NNAG++      +     S ++ +F+
Sbjct: 61  GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA--RPDTLLSGSTSGWKDMFN 118

Query: 126 INVKGVFHGMKHAARIMIPQ--TKGTIISICSVAG--AIGGLGPHAYTGSKHAVLGLNKN 181
           +NV  +    + A + M  +    G II+I S++G   +     H Y+ +K+AV  L + 
Sbjct: 119 VNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEG 178

Query: 182 VAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           +  EL   +  IR  C+SP  V T  A   L +++  +          A     Q   L 
Sbjct: 179 LRQELREAQTHIRATCISPGVVETQFA-FKLHDKDPEK----------AAATYEQMKCLK 227

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
             DVA AV+++ S  A    G   M   G
Sbjct: 228 PEDVAEAVIYVLSTPAHIQIGDIQMRPTG 256

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  199 bits (508), Expect = 7e-64
 Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 7/263 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL----GGEPDTFF 70
           R  G+  +ITG + GIG S   +F K GA+V I    ++  ++  Q +            
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              DVT+       ++ T+ KFG +DI+VNNAG + A      +  +  ++K F +N + 
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
           V    +     +I      +     VAG     G   Y  +K A+    +  A +L ++G
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +RVN VSP AVATG  +  +   E   D +  F         + G      ++AN ++FL
Sbjct: 181 VRVNSVSPGAVATGF-MGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEEIANIIVFL 238

Query: 251 AS-DEARYISGTNLMVDGGFTSV 272
           A  + + YI G +++ DGG T V
Sbjct: 239 ADRNLSSYIIGQSIVADGGSTLV 261

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  199 bits (506), Expect = 8e-64
 Identities = 93/256 (36%), Positives = 124/256 (48%), Gaps = 14/256 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           L G+  +ITGGA G+G    R     GA+V +ADV D  G    + LG      + H DV
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA--ARYQHLDV 60

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T EED    V    E+FG++D +VNNAGIS     +    +   F KV +IN+ GVF GM
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE--RFRKVVEINLTGVFIGM 118

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K     M     G+I++I S AG +G     +Y  SK  V GL+K  A ELG   IRVN 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V P    T            T +  +        N  M        ++A AV+ L SD +
Sbjct: 179 VHPGMTYT----------PMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS 228

Query: 256 RYISGTNLMVDGGFTS 271
            Y++G  L VDGG+T+
Sbjct: 229 SYVTGAELAVDGGWTT 244

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  197 bits (501), Expect = 4e-63
 Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 10/258 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTF-FCHCD 74
           L G  AL+TGG+ GIG   V      GA V                   +        CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 75  VTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           ++   +    ++     F G L+I+VNNAGI      + ++  + ++  +  IN +  +H
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGI--VIYKEAKDYTVEDYSLIMSINFEAAYH 123

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
               A   +    +G ++ I SV+GA+       Y  +K A+  L + +A E  K  IRV
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V P  +AT L    + + E+ E+        + R A          ++A  V FL   
Sbjct: 184 NGVGPGVIATSLVEMTIQDPEQKEN----LNKLIDRCA--LRRMGEPKELAAMVAFLCFP 237

Query: 254 EARYISGTNLMVDGGFTS 271
            A Y++G  + VDGG  +
Sbjct: 238 AASYVTGQIIYVDGGLMA 255

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  190 bits (483), Expect = 2e-60
 Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
           L  +  L+TGG  GIG + V  F   GA +      +    +       +        CD
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 75  VTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
            +   +    +      F G LDI++NN G   +      +    +F      N++  +H
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSK--PTLDYTAEDFSFHISTNLESAYH 123

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A  ++     G II + S+AG +       Y+ +K A+  L +N+A E    GIR 
Sbjct: 124 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 183

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  +AT LA A   +E +              +    G      +V++ V FL   
Sbjct: 184 NAVAPAVIATPLAEAVYDDEFKKV----------VISRKPLGRFGEPEEVSSLVAFLCMP 233

Query: 254 EARYISGTNLMVDGGFTSVNHSLR 277
            A YI+G  + VDGG T    S +
Sbjct: 234 AASYITGQTICVDGGLTVNGFSYQ 257

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  189 bits (480), Expect = 4e-60
 Identities = 68/257 (26%), Positives = 111/257 (43%), Gaps = 19/257 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
              G  AL+TG   GIG  TV+  H  GAKV      ++    + +   G         D
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG---IEPVCVD 58

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   +    A +  +   G +D++VNNA +         E     F++ F +N++ VF  
Sbjct: 59  LGDWD----ATEKALGGIGPVDLLVNNAAL--VIMQPFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 135 MKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  AR MI +   G+I+++ S+   +       Y+ +K A+  L K +A ELG + IRV
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  V T +      + E              +  +         DV N++LFL SD
Sbjct: 173 NSVNPTVVLTDMGKKVSADPEFARK---------LKERHPLRKFAEVEDVVNSILFLLSD 223

Query: 254 EARYISGTNLMVDGGFT 270
            +   SG  ++VD G+ 
Sbjct: 224 RSASTSGGGILVDAGYL 240

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  189 bits (482), Expect = 5e-60
 Identities = 75/260 (28%), Positives = 112/260 (43%), Gaps = 9/260 (3%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           +L G   LITGGA+G+G + V  F   GAKV + D       ++    G          D
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN--VLGIVGD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCP---DIREADLSEFEKVFDINVKGV 131
           V   ED   A    V +FG +D ++ NAGI            E+  + F++VF INVKG 
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
            H +K     ++   +G +I   S AG     G   YT +KHA++GL + +A EL  Y +
Sbjct: 120 IHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-V 177

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN V    + + L             + V   + +     + G      +   A +F A
Sbjct: 178 RVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-GRMPEVEEYTGAYVFFA 236

Query: 252 S-DEARYISGTNLMVDGGFT 270
           +  +A   +G  L  DGG  
Sbjct: 237 TRGDAAPATGALLNYDGGLG 256

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  188 bits (479), Expect = 6e-60
 Identities = 82/256 (32%), Positives = 124/256 (48%), Gaps = 18/256 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL  +  LITG A GIG +T+ LF K GA++   D+++   ++  +++G  P       D
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP----VVMD 57

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V     V       +   G LD +V+ AGI         +  L ++E V  +N+ G F  
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGI--TRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            K A+  M  +     I + +    +G LG   Y  S   V+GL + +A ELG++GIRVN
Sbjct: 116 AKAASEAMREK-NPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVN 174

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            ++P  + T +  A +PE+ R +          A  A   G      +VA A LFL SDE
Sbjct: 175 TLAPGFIETRM-TAKVPEKVREK----------AIAATPLGRAGKPLEVAYAALFLLSDE 223

Query: 255 ARYISGTNLMVDGGFT 270
           + +I+G  L VDGG T
Sbjct: 224 SSFITGQVLFVDGGRT 239

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (476), Expect = 1e-59
 Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 19/257 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            L GR  L+TG   GIG  TV+  H  GA+V            + +   G         D
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG---IEPVCVD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           +   E    A +  +   G +D++VNNA ++        E     F++ F++N++ V   
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQV 114

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +  AR +I +     I   S   +   +     Y  +K A+  L K +A ELG + IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  V T +  A   +  + +  +         N    G       V NA+LFL SD
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTML---------NRIPLGKFAEVEHVVNAILFLLSD 225

Query: 254 EARYISGTNLMVDGGFT 270
            +   +G+ L V+GGF 
Sbjct: 226 RSGMTTGSTLPVEGGFW 242

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (479), Expect = 2e-59
 Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 16/270 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE------PDT 68
            L G+VA++TGGATGIG++ V+   + G+ V IA  +    +     L            
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 69  FFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINV 128
               C++  EE+V + V  T++ FG ++ +VNN G  G             +  V + N+
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG--GQFLSPAEHISSKGWHAVLETNL 126

Query: 129 KGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            G F+  K      + +  G+I++I     A   L  H+   ++  V  L K++A E   
Sbjct: 127 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGA-ARAGVYNLTKSLALEWAC 185

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            GIR+NCV+P  + +  A+ +     ++       +    R            +V++ V 
Sbjct: 186 SGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIG-------VPEEVSSVVC 238

Query: 249 FLASDEARYISGTNLMVDGGFTSVNHSLRV 278
           FL S  A +I+G ++ VDGG +   HS  V
Sbjct: 239 FLLSPAASFITGQSVDVDGGRSLYTHSYEV 268

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  188 bits (479), Expect = 3e-59
 Identities = 60/264 (22%), Positives = 97/264 (36%), Gaps = 31/264 (11%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-------PD 67
           R  GRV L+TG   G+G +    F + GA V + D+  +       S   +         
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
                 +    E     V   ++ FG +D++VNNAGI              +++ +  ++
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDR--SFSRISDEDWDIIQRVH 121

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG 187
           ++G F   + A   M  Q  G II   S +G  G  G   Y+ +K  +LGL   +  E  
Sbjct: 122 LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR 181

Query: 188 KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV 247
           K  I  N ++P A +       +PE+                        L    VA  V
Sbjct: 182 KNNIHCNTIAPNAGSRMTE-TVMPED--------------------LVEALKPEYVAPLV 220

Query: 248 LFLASDEARYISGTNLMVDGGFTS 271
           L+L  +     +G    V  G+  
Sbjct: 221 LWLCHESC-EENGGLFEVGAGWIG 243

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  184 bits (469), Expect = 3e-58
 Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 23/266 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCH 72
             V +  ++TGG  GIG +  R     GA V +         +V + +G E    T    
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV+  + V   +       G +  ++ NAG+  +      E    +F  V+D+NV GVF
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV--SVVKPATELTHEDFAFVYDVNVFGVF 123

Query: 133 HGMKHAARIMIPQTKGTIISI--------CSVAGAIGGLGPHAYTGSKHAVLGLNKNVAA 184
           +  +  A++ + + +   I +         + +   G L    Y  SK A   L K +AA
Sbjct: 124 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 183

Query: 185 ELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA 244
           E    GIRVN +SP  V T    AH+ ++          R+  A N  +        ++ 
Sbjct: 184 EWASAGIRVNALSPGYVNTDQ-TAHMDKK---------IRDHQASNIPL-NRFAQPEEMT 232

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
              + L SD A Y++G    +DGG  
Sbjct: 233 GQAILLLSDHATYMTGGEYFIDGGQL 258

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  184 bits (468), Expect = 4e-58
 Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 14/258 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           RL G+ A+ITG   GIG+     F   GA V ++D+  +    V   +       F C C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D+T E+++ +  D  + K G +DI+VNNAG  G   P   +  +++F + +++NV   FH
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGG---PKPFDMPMADFRRAYELNVFSFFH 124

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +  A  M     G I++I S+A     +   +Y  SK A   L +N+A +LG+  IRV
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P A+ T    + +  E   +                        D+ANA LFL S 
Sbjct: 185 NGIAPGAILTDALKSVITPEIEQK----------MLQHTPIRRLGQPQDIANAALFLCSP 234

Query: 254 EARYISGTNLMVDGGFTS 271
            A ++SG  L V GG   
Sbjct: 235 AASWVSGQILTVSGGGVQ 252

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  184 bits (467), Expect = 5e-58
 Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 9/257 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCD 74
           L G  AL+TGG+ GIG + V      GA+V      +    +  +    +  +     CD
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 75  VTKEEDVCSAVDLTVEKF-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +    +    +      F G L+I+VNNAG+      + ++    ++  +   N +  +H
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVV--IHKEAKDFTEKDYNIIMGTNFEAAYH 121

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             + A  ++     G +I + S+AG         Y+ SK A+  + K++A E  K  IRV
Sbjct: 122 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 181

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N V+P  + T L    + +    ++ +  F           G      +V+  + FL   
Sbjct: 182 NSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP-----MGRAGKPQEVSALIAFLCFP 236

Query: 254 EARYISGTNLMVDGGFT 270
            A YI+G  +  DGGFT
Sbjct: 237 AASYITGQIIWADGGFT 253

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  183 bits (465), Expect = 8e-58
 Identities = 94/262 (35%), Positives = 138/262 (52%), Gaps = 21/262 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+VAL++GGA G+G S VR     GAKV   D+ D  G+ +   L       + H D
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA--ARYVHLD 60

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT+     +AVD  V  FG L ++VNNAGI      +  +  L+E++++ D+N+ GVF G
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIE--DYALTEWQRILDVNLTGVFLG 118

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           ++   + M    +G+II+I S+ G  G +  H YT +K AV GL K+ A ELG  GIRVN
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 178

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  V T +    +PE+                     G      +V+N V++LASDE
Sbjct: 179 SIHPGLVKTPMT-DWVPEDIF---------------QTALGRAAEPVEVSNLVVYLASDE 222

Query: 255 ARYISGTNLMVDGGFT-SVNHS 275
           + Y +G   +VDGG    + H+
Sbjct: 223 SSYSTGAEFVVDGGTVAGLAHN 244

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 9e-58
 Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 23/261 (8%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCD 74
           G+VAL+TG A GIG +        GAKV + D     G Q   +L        T F  CD
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V  ++ +       V+ FG LDI+VNNAG++          +   +EK   IN+  V  G
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVN----------NEKNWEKTLQINLVSVISG 112

Query: 135 MKHAARIMIPQTK---GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNV--AAELGKY 189
                  M  Q     G II++ S+AG +       Y  SKH ++G  ++   AA L   
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS 172

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+R+N + P  V T +  +   EE       + +++ +       G  L    +AN ++ 
Sbjct: 173 GVRLNAICPGFVNTAILESIEKEENM--GQYIEYKDHIKDMIKYYGI-LDPPLIANGLIT 229

Query: 250 LASDEARYISGTNLMVDGGFT 270
           L  D+A  ++G  + +     
Sbjct: 230 LIEDDA--LNGAIMKITTSKG 248

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  184 bits (467), Expect = 9e-58
 Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 9/266 (3%)

Query: 10  SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGE-PD 67
            P    L G+VAL+TG   GIG        + G KV +         ++V  ++     D
Sbjct: 10  GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD 69

Query: 68  TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDIN 127
                 +V   ED+    +  V+ FG LDI+ +N+G+       +++    EF++VF IN
Sbjct: 70  AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTIN 127

Query: 128 VKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAEL 186
            +G F   + A + +     G +I + S+ G    +  HA    SK A+    + +A ++
Sbjct: 128 TRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 185

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG--FRNFVARNANMQGTELTANDVA 244
               I VN V+P  + T +  A   E     + +       + A   +         D+A
Sbjct: 186 ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA 245

Query: 245 NAVLFLASDEARYISGTNLMVDGGFT 270
             V FLAS++  +++G  + +DGG  
Sbjct: 246 RVVCFLASNDGGWVTGKVIGIDGGAC 271

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  183 bits (465), Expect = 1e-57
 Identities = 85/259 (32%), Positives = 132/259 (50%), Gaps = 7/259 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFC 71
           R   RV LITGG +G+G +T       GAK+ + DV     +    ++     + +    
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV+ E  V + V  T E+FG +D   NNAGI G   P       +EF+KV  IN++GV
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPT-ESFTAAEFDKVVSINLRGV 119

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           F G++   +IM  Q  G +++  SV G  G      Y  +KH V+GL +N A E G+YGI
Sbjct: 120 FLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 179

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           R+N ++P A+ T + + +  ++   E+       F+  N         A ++A  V FL 
Sbjct: 180 RINAIAPGAIWTPM-VENSMKQLDPENPRKAAEEFIQVNP--SKRYGEAPEIAAVVAFLL 236

Query: 252 SDEARYISGTNLMVDGGFT 270
           SD+A Y++ T + +DGG +
Sbjct: 237 SDDASYVNATVVPIDGGQS 255

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  182 bits (462), Expect = 2e-57
 Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 9/252 (3%)

Query: 21  ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED 80
           A++T      G  +     + G  V   D       ++ ++        +       E++
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-EAFAET----YPQLKPMSEQE 57

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
               ++     +G +D++V+N   +    P I +  + ++    +      F  +   A 
Sbjct: 58  PAELIEAVTSAYGQVDVLVSNDIFAPEFQP-IDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 141 IMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYA 200
            M  +  G II I S            YT ++     L   ++ ELG+Y I V  + P  
Sbjct: 117 QMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNY 176

Query: 201 VATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISG 260
           + +  +    P E    +        V +   +     T  ++   V FLAS    Y++G
Sbjct: 177 LHSEDSPYFYPTEPWKTNP--EHVAHVKKVTAL-QRLGTQKELGELVAFLASGSCDYLTG 233

Query: 261 TNLMVDGGFTSV 272
               + GGF  +
Sbjct: 234 QVFWLAGGFPMI 245

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 3e-57
 Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 16/257 (6%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+V ++T  A GIG++    F + GAKV   D+ ++  Q++ +  G +         
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK 62

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
              ++           +   LD++ N AG        + + +  +++   ++NV+ ++  
Sbjct: 63  KQIDQFAN--------EVERLDVLFNVAGF--VHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKHAVLGLNKNVAAELGKYGIRV 193
           +K     M+ Q  G II++ SVA ++ G+     Y+ +K AV+GL K+VAA+  + GIR 
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           NCV P  V T      +      E+A   F           G   TA ++A   ++LASD
Sbjct: 173 NCVCPGTVDTPSLQERIQARGNPEEARNDF-----LKRQKTGRFATAEEIAMLCVYLASD 227

Query: 254 EARYISGTNLMVDGGFT 270
           E+ Y++G  +++DGG++
Sbjct: 228 ESAYVTGNPVIIDGGWS 244

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  182 bits (462), Expect = 3e-57
 Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 14/257 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
               +VAL+TG   GIG    ++  K  + V            V   +     ++     
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 66

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+K+E++   ++  + +   +DI+VNNAGI+        + D  E+E V   N+  +F+
Sbjct: 67  DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKND--EWEDVLRTNLNSLFY 124

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
             +  ++ MI    G II+I S+ G  G +G   Y+ SK  V+G  K++A EL    I V
Sbjct: 125 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 184

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P  +++ +      + ++   + +                 T  +VAN   FL+SD
Sbjct: 185 NAIAPGFISSDMTDKISEQIKKNIISNIPAGRMG-----------TPEEVANLACFLSSD 233

Query: 254 EARYISGTNLMVDGGFT 270
           ++ YI+G   ++DGG +
Sbjct: 234 KSGYINGRVFVIDGGLS 250

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  181 bits (459), Expect = 8e-57
 Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 14/259 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHC 73
           L GRVAL+TGG+ G+G    +   + G  V +A        +  Q L  +   +T    C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DV+  E+V   ++   EKFG LD +VN AGI+        E  L EF +V ++N+ G ++
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN--RRHPAEEFPLDEFRQVIEVNLFGTYY 120

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKYGIR 192
             + A  ++      +II+I S+      +   +    SK  V  L K +A E G+YGIR
Sbjct: 121 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 180

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN ++P    T +  A   + E+ +  +              G      D+    +FLAS
Sbjct: 181 VNVIAPGWYRTKMTEAVFSDPEKLDYML---------KRIPLGRTGVPEDLKGVAVFLAS 231

Query: 253 DEARYISGTNLMVDGGFTS 271
           +EA+Y++G  + VDGG+T+
Sbjct: 232 EEAKYVTGQIIFVDGGWTA 250

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  180 bits (458), Expect = 1e-56
 Identities = 69/258 (26%), Positives = 108/258 (41%), Gaps = 9/258 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           L G+VAL TG   GIG        + GA V +         ++V   L            
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++K  +V +  D  V  FG LD +++N+G+      D  E     F+KVF++N +G F 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVTQELFDKVFNLNTRGQFF 121

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKYGIR 192
             +   +    +  G II   S+A  + G+  HA    SK AV G  +  A + G  G+ 
Sbjct: 122 VAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 179

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ--GTELTANDVANAVLFL 250
           VNC++P  V T +   +           +         ANM          D+  AV  L
Sbjct: 180 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSAL 239

Query: 251 ASDEARYISGTNLMVDGG 268
             +E+ +I+G  + + GG
Sbjct: 240 CQEESEWINGQVIKLTGG 257

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  179 bits (456), Expect = 1e-56
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 18/256 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+  L+TG A+GIG + + LF + GA +   D ++ L  +   +L  E        D
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE--AIAVVAD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           V+  + V +     +E+FG L  + + AG++ +        +   +EKV  +N+ G F  
Sbjct: 60  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE--AWEKVLRVNLTGSFLV 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
            + A  ++       +    +    +G  G   Y   K  V+GL + +A EL + G+RVN
Sbjct: 118 ARKAGEVLEEGGSLVLTGSVA---GLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVN 174

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            + P  + T +     P     E                        +VA A LFL S+E
Sbjct: 175 VLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAG-----------RPEEVAQAALFLLSEE 223

Query: 255 ARYISGTNLMVDGGFT 270
           + YI+G  L VDGG +
Sbjct: 224 SAYITGQALYVDGGRS 239

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  179 bits (454), Expect = 4e-56
 Identities = 78/260 (30%), Positives = 118/260 (45%), Gaps = 7/260 (2%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
           +  G+V L+TG    IG +T     + G  + + D+     ++   S+  +  +     C
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVC 61

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT EE V   VD  V  FG +D + NNAG  GA  P        +F +V  INV G FH
Sbjct: 62  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPS-DDFARVLTINVTGAFH 120

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
            +K  +R MI Q  G I++  S+AG  G     AY  SK A++ L +  A +L  Y IRV
Sbjct: 121 VLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 180

Query: 194 NCVSPYAVATGLALAHLPE-EERTEDAMVGFRNFVARNANMQGTEL----TANDVANAVL 248
           N +SP  +  G       E + +           V     +    +      N++   V 
Sbjct: 181 NAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 240

Query: 249 FLASDEARYISGTNLMVDGG 268
           FL  D++ +++G NL + GG
Sbjct: 241 FLLGDDSSFMTGVNLPIAGG 260

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  178 bits (452), Expect = 2e-55
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCH 72
              G+VA ITGG TG+G+    L    GA+  IA  + ++ +   + +  +         
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
           CDV   + V + V   ++  G  +I++NNA  +G           + ++ + DI + G  
Sbjct: 82  CDVRDPDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTA 139

Query: 133 -HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              ++   +++  Q     +SI ++    G         +K  V  ++K++AAE GKYG+
Sbjct: 140 FVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM 199

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           R N + P  + T  A + L      E  M+G            G   T  ++AN   FL 
Sbjct: 200 RFNVIQPGPIKTKGAFSRLDPTGTFEKEMIG--------RIPCGRLGTVEELANLAAFLC 251

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           SD A +I+G  +  DGG   +
Sbjct: 252 SDYASWINGAVIKFDGGEEVL 272

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  171 bits (435), Expect = 3e-53
 Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 15/257 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
             G++AL+TG + GIG +        GAKV      +N  Q +   LG          +V
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN--GKGLMLNV 59

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T    + S ++    +FG +DI+VNNAGI+        + +  E+  + + N+  VF   
Sbjct: 60  TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE--EWNDIIETNLSSVFRLS 117

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           K   R M+ +  G II+I SV G +G  G   Y  +K  ++G +K++A E+   GI VN 
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P  + T +  A   ++     A V                  A ++ANAV FLASDEA
Sbjct: 178 VAPGFIETDMTRALSDDQRAGILAQVPAGRLG-----------GAQEIANAVAFLASDEA 226

Query: 256 RYISGTNLMVDGGFTSV 272
            YI+G  L V+GG   V
Sbjct: 227 AYITGETLHVNGGMYMV 243

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  169 bits (430), Expect = 2e-52
 Identities = 72/255 (28%), Positives = 111/255 (43%), Gaps = 5/255 (1%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
           RL G+ ALITG A GIG +    + + GA+V IAD+     +     +G          D
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA--ACAIALD 59

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHG 134
           VT +  +   V   ++++G++DI+VNNA +         E     ++++F INV G    
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPI--VEITRESYDRLFAINVSGTLFM 117

Query: 135 MKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG-SKHAVLGLNKNVAAELGKYGIRV 193
           M+  AR MI   +G  I   +      G         +K AV+ L ++    L ++GI V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177

Query: 194 NCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD 253
           N ++P  V          +    E+   G +      A   G    A D+    +FLA+ 
Sbjct: 178 NAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATP 237

Query: 254 EARYISGTNLMVDGG 268
           EA YI      VDGG
Sbjct: 238 EADYIVAQTYNVDGG 252

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  169 bits (429), Expect = 2e-52
 Identities = 65/256 (25%), Positives = 101/256 (39%), Gaps = 5/256 (1%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVT 76
             VAL+TG  +GIG    R   K G +V +    +   +   + L     +     CDV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
              ++ + V   VE++G +D++VNNAG  G       E     +  V + N+ GVF   K
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVTK 119

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPH--AYTGSKHAVLGLNKNVAAELGKYGIRVN 194
              +      +GT   +   +        H   Y+ SKH V+G  K +  EL + GI VN
Sbjct: 120 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 179

Query: 195 CVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE 254
            V P  V T +A +         +                G  +  ++VA  V +L    
Sbjct: 180 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 239

Query: 255 ARYISGTNLMVDGGFT 270
           A  ++   L V GG  
Sbjct: 240 AAAVTAQALNVCGGLG 255

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (428), Expect = 3e-52
 Identities = 61/264 (23%), Positives = 99/264 (37%), Gaps = 37/264 (14%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHC 73
            + G + LITG   GIG  T   F K  +K+ + D+  +  ++      G          
Sbjct: 4   SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVV 63

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D +  ED+ S+      + G + I+VNNA        D+      + EK F++NV   F 
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNA--GVVYTSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY---G 190
             K     M     G I+++ S AG +      AY  SK A +G +K +  EL      G
Sbjct: 122 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 181

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-- 248
           ++  C+ P  V TG                     F+   +   G  L   +V N ++  
Sbjct: 182 VKTTCLCPNFVNTG---------------------FIKNPSTSLGPTLEPEEVVNRLMHG 220

Query: 249 --------FLASDEARYISGTNLM 264
                   F+ S  A   +   ++
Sbjct: 221 ILTEQKMIFIPSSIAFLTTLERIL 244

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  168 bits (427), Expect = 5e-52
 Identities = 79/261 (30%), Positives = 117/261 (44%), Gaps = 8/261 (3%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGE--PDTFFCH 72
           L G+VA++TG  +GIG          GA + +    D    ++V   L  +      +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            D++K E V   VD  V + G +DI+VNNAGI       I +    +++ +  +N+  VF
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ--HTALIEDFPTEKWDAILALNLSAVF 119

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           HG   A   M  Q  G II+I S  G +      AY  +KH V+G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 193 VNCVSPYAVATGLALAHLPE--EERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
            N + P  V T L    +    E+   D     R  ++         +T   +    +FL
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVFL 238

Query: 251 ASDEARYISGTNLMVDGGFTS 271
           ASD A  I+GT + VDGG+T+
Sbjct: 239 ASDAAAQITGTTVSVDGGWTA 259

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  166 bits (422), Expect = 2e-51
 Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 16/254 (6%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGE-PDTFFCHCDVTK 77
           V ++TG + GIG++      K G KV +   +     ++V + +            DV+K
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E DV + +   ++ +GT+D++VNNAGI+        +    ++++V D+N+ GVF   + 
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKS--QWDEVIDLNLTGVFLCTQA 120

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
           A +IM+ + KG II+I SV G IG +G   Y  +K  V+G +K  A E     I VN V 
Sbjct: 121 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 180

Query: 198 PYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SDEAR 256
           P  +A+ +      + E+     +                    +VA  V FLA S  A 
Sbjct: 181 PGFIASDMTAKLGEDMEKKILGTIPLGRTG-----------QPENVAGLVEFLALSPAAS 229

Query: 257 YISGTNLMVDGGFT 270
           YI+G    +DGG  
Sbjct: 230 YITGQAFTIDGGIA 243

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  167 bits (423), Expect = 2e-51
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 14/258 (5%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGE-PDTFFCHC 73
           L G+V +ITG +TG+G+S    F    AKV +    +++    V + +     +      
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           DVT E DV + V   +++FG LD+M+NNAG+         E  LS++ KV D N+ G F 
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH--EMSLSDWNKVIDTNLTGAFL 122

Query: 134 GMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
           G + A +  +     GT+I++ SV   I       Y  SK  +  + + +A E    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN + P A+ T +      + E+  D           +    G      ++A    +LAS
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADV---------ESMIPMGYIGEPEEIAAVAAWLAS 233

Query: 253 DEARYISGTNLMVDGGFT 270
            EA Y++G  L  DGG T
Sbjct: 234 SEASYVTGITLFADGGMT 251

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  165 bits (419), Expect = 7e-51
 Identities = 45/263 (17%), Positives = 81/263 (30%), Gaps = 28/263 (10%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ--SLGGEPDTFFCH 72
            L  +  +      GIG  T R   K   K  +   +      + +  ++  + +  F  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 73  CDVT-KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
            DVT    +    +    ++  T+DI++N AGI           D  + E+   IN  G+
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL----------DDHQIERTIAINFTGL 111

Query: 132 FHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGK 188
            +           +     G I +ICSV G         Y+ SK AV+    ++A     
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 189 YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL 248
            G+    ++P    T L        +                  +     T+       +
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEP---------RVAELLLSHPTQTSEQCGQNFV 222

Query: 249 FLASDEARYISGTNLMVDGGFTS 271
                     +G    +D G   
Sbjct: 223 KAIEA---NKNGAIWKLDLGTLE 242

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  164 bits (417), Expect = 1e-50
 Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 26/255 (10%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
           +  +  L+   + GIG +   +  + GA+V I    + L ++            +  CD+
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR--------YVVCDL 53

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
            K+      +DL  EK   +DI+V NAG   A   D    +  +F++  D     +   +
Sbjct: 54  RKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNE--DFKEAIDSLFLNMIKIV 105

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           ++    M  +  G I++I S +        +    ++ A+ G  K ++ E+  YGI VNC
Sbjct: 106 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 165

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P    T      L EE++ +            +           ++A+ V FL S++A
Sbjct: 166 VAPGWTETERVKELLSEEKKKQ----------VESQIPMRRMAKPEEIASVVAFLCSEKA 215

Query: 256 RYISGTNLMVDGGFT 270
            Y++G  ++VDGG +
Sbjct: 216 SYLTGQTIVVDGGLS 230

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  163 bits (413), Expect = 5e-50
 Identities = 74/254 (29%), Positives = 110/254 (43%), Gaps = 4/254 (1%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTK 77
           +VAL+TG   GIG++      K G  V IAD  D   + V   +            DV+ 
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
            + V +AV+   +  G  D++VNNAG++  P   I        +KV++INVKGV  G++ 
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVA--PSTPIESITPEIVDKVYNINVKGVIWGIQA 119

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGP-HAYTGSKHAVLGLNKNVAAELGKYGIRVNCV 196
           A      +  G  I          G      Y+ SK AV GL +  A +L   GI VN  
Sbjct: 120 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 179

Query: 197 SPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEAR 256
            P  V T +      +        +G+           G      DVA  V +LAS ++ 
Sbjct: 180 CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 239

Query: 257 YISGTNLMVDGGFT 270
           Y++G +L++DGG  
Sbjct: 240 YMTGQSLLIDGGMV 253

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  159 bits (404), Expect = 9e-49
 Identities = 75/253 (29%), Positives = 110/253 (43%), Gaps = 23/253 (9%)

Query: 16  LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
            V R  L+TGG  GIG +  +     G KV +        + +          F    DV
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL----------FGVEVDV 54

Query: 76  TKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGM 135
           T  + V  A     E  G ++++V+NAG+S      +      +FEKV + N+ G F   
Sbjct: 55  TDSDAVDRAFTAVEEHQGPVEVLVSNAGLS--ADAFLMRMTEEKFEKVINANLTGAFRVA 112

Query: 136 KHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNC 195
           + A+R M     G +I I SV+G  G      Y  SK  V+G+ +++A EL K  +  N 
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 172

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V+P  + T +    L E  +            A          T  +VA  V FLAS++A
Sbjct: 173 VAPGYIDTDM-TRALDERIQQG----------ALQFIPAKRVGTPAEVAGVVSFLASEDA 221

Query: 256 RYISGTNLMVDGG 268
            YISG  + VDGG
Sbjct: 222 SYISGAVIPVDGG 234

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  158 bits (400), Expect = 4e-48
 Identities = 52/261 (19%), Positives = 100/261 (38%), Gaps = 15/261 (5%)

Query: 16  LVGRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
           L G+ AL+ G      +G +      + GA+V ++   + L  +  +             
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGIS--GAPCPDIREADLSEFEKVFDINVKGV 131
           DVT++E++ +      E FG LD +V+    +   A      +    ++    +++   +
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
               + A  ++     G I+++   A        +    +K A+    + +A ELG  G+
Sbjct: 126 VAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGV 183

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RVN +S   V T  A +     +  +                    +T  +V N  LFL 
Sbjct: 184 RVNAISAGPVRTVAARSIPGFTKMYDRVA---------QTAPLRRNITQEEVGNLGLFLL 234

Query: 252 SDEARYISGTNLMVDGGFTSV 272
           S  A  I+G  + VD G+  +
Sbjct: 235 SPLASGITGEVVYVDAGYHIM 255

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  153 bits (387), Expect = 5e-46
 Identities = 67/272 (24%), Positives = 104/272 (38%), Gaps = 33/272 (12%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGGE--PDTFFCHCDVT 76
            A+ITGGA  IG S     H+ G +V +     +   Q++   L          C  D++
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 77  K----EEDVCSAVDLTVEKFGTLDIMVNNAGISGA---------PCPDIREADLSEFEKV 123
                 +     +D +   FG  D++VNNA                    +   ++  ++
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 124 FDINVKGVFHGMKHAARIMIPQTKGTIIS-----ICSVAGAIGGLGPHAYTGSKHAVLGL 178
           F  N       ++  AR           +     +C     +   G   YT +KHA+ GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 179 NKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL 238
            +  A EL    IRVN V+P       A+    +EE      +G              E 
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQS------------EA 230

Query: 239 TANDVANAVLFLASDEARYISGTNLMVDGGFT 270
           +A  +A+A+ FL S +A YI+GT L VDGG  
Sbjct: 231 SAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  150 bits (380), Expect = 3e-45
 Identities = 63/259 (24%), Positives = 100/259 (38%), Gaps = 30/259 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
           R AL+TGGA+G+G +        G +V + D++               D  +   DVT+E
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-----------DLIYVEGDVTRE 50

Query: 79  EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREA-DLSEFEKVFDINVKGVFHGMKH 137
           EDV  AV    E+     ++                   L  F +V ++N+ G F+ ++ 
Sbjct: 51  EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110

Query: 138 AARI------MIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
           AA             +G I++  SVA   G +G  AY  SK  V+ L    A EL  +GI
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

Query: 192 RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA 251
           RV  V+P    T L      + + +  A V                    + A  VL + 
Sbjct: 171 RVVTVAPGLFDTPLLQGLPEKAKASLAAQV----------PFPPRLGRPEEYAALVLHIL 220

Query: 252 SDEARYISGTNLMVDGGFT 270
            +    ++G  + +DG   
Sbjct: 221 EN--PMLNGEVVRLDGALR 237

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  150 bits (380), Expect = 3e-45
 Identities = 56/259 (21%), Positives = 92/259 (35%), Gaps = 31/259 (11%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAK-------VCIADVQDNLGQQVCQSLGGE-PDTFF 70
            + LITG   GIG +    F +           + ++       +++      E   T  
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              D++   DV       VE++G +D +VNNAG+       + +    +F+   + N+KG
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG--RFGALSDLTEEDFDYTMNTNLKG 119

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            F   +    +M  Q  G I  I SVA          Y  SK    GL + +     K  
Sbjct: 120 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 179

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL 250
           +R+  V P AV T +    + +E                   MQ   +   D+A  V+  
Sbjct: 180 VRITDVQPGAVYTPM-WGKVDDE-------------------MQALMMMPEDIAAPVVQA 219

Query: 251 ASDEARYISG-TNLMVDGG 268
               +R +     L    G
Sbjct: 220 YLQPSRTVVEEIILRPTSG 238

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  144 bits (364), Expect = 1e-42
 Identities = 50/261 (19%), Positives = 95/261 (36%), Gaps = 16/261 (6%)

Query: 15  RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
            L G+  L+TG A+   I     +  H+ GA++      D L  +V +            
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLS---EFEKVFDINVK 129
           CDV ++  + +      + +   D  V++ G +     D    +      F+   DI+  
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 130 GVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKY 189
                 K    ++ P +   ++++  +         +    +K ++    + +A  +G  
Sbjct: 122 SFVAMAKACRSMLNPGS--ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 190 GIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF 249
           G+RVN +S   + T            +                     +T  DV N+  F
Sbjct: 180 GVRVNAISAGPIRT---------LAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 230

Query: 250 LASDEARYISGTNLMVDGGFT 270
           L SD +  ISG  + VDGGF+
Sbjct: 231 LCSDLSAGISGEVVHVDGGFS 251

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  141 bits (356), Expect = 1e-41
 Identities = 39/259 (15%), Positives = 76/259 (29%), Gaps = 33/259 (12%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
            R  L+ GG   +G   V+ F      V   DV +N                      T+
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-------EEASASVIVKMTDSFTE 54

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           + D  +A    +     +D ++  AG          ++     + ++  ++         
Sbjct: 55  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQSIWTSTISSHL 113

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYGIRVNC 195
           A + +       +    + A   G  G   Y  +K AV  L +++A +      G     
Sbjct: 114 ATKHLKEGG--LLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIA 171

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA 255
           V P  + T +    +PE +                     +      +        +   
Sbjct: 172 VLPVTLDTPMNRKSMPEADF-------------------SSWTPLEFLVETFHDWITGNK 212

Query: 256 RYISGTNLMV--DGGFTSV 272
           R  SG+ + V    G T +
Sbjct: 213 RPNSGSLIQVVTTDGKTEL 231

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 2e-40
 Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 13/251 (5%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDTFFCH 72
            L G+  ++TG + GIG        K GA V +        Q+V       G     +  
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
             +         V    +  G LD+++ N   +     ++   D+    K  ++N     
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN--TSLNLFHDDIHHVRKSMEVNFLSYV 128

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELG--KYG 190
                A  ++  Q+ G+I+ + S+AG +      AY+ SK A+ G   ++  E    +  
Sbjct: 129 VLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 187

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR---NANMQGTELTANDVANAV 247
           + +       + T  A+  +      + A        A           E    D +   
Sbjct: 188 VSITLCVLGLIDTETAMKAVSGIVHMQAAPK---EECALEIIKGGALRQEEVYYDSSLWT 244

Query: 248 LFLASDEARYI 258
             L  + +R I
Sbjct: 245 TLLIRNPSRKI 255

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 2e-40
 Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 20/259 (7%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCD 74
            + G VA+ITGGA+G+G +T       GA   + D+ ++ G+   + LG           
Sbjct: 2   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 75  VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVF 132
             K+     A+         + +      ++         +   L +F++V D+N+ G F
Sbjct: 62  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121

Query: 133 HGMKHAARIMIPQT------KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAEL 186
           + ++  A  M          +G II+  SVA   G +G  AY+ SK  ++G+   +A +L
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181

Query: 187 GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA 246
              GIRV  ++P    T L    LPE+           NF+A             + A+ 
Sbjct: 182 APIGIRVMTIAPGLFGTPLL-TSLPEK---------VCNFLASQVPFPSRLGDPAEYAHL 231

Query: 247 VLFLASDEARYISGTNLMV 265
           V  +  +   +++G  + +
Sbjct: 232 VQAIIEN--PFLNGEVIRL 248

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 1e-39
 Identities = 50/262 (19%), Positives = 85/262 (32%), Gaps = 20/262 (7%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADV-------QDNLGQQVCQSLGGEPDTFFC 71
            V LITG ++GIG           ++             Q  L +               
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
             DV   + V +A +   E    + +     G+ G       +        V D+NV G 
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGED----AVASVLDVNVVGT 118

Query: 132 FHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGI 191
              ++     M  +  G ++   SV G +G      Y  SK A+ GL +++A  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 192 RVNCVSPYAVATGL--ALAHLPEEERTEDAMVGFRNFVARNANMQ----GTELTANDVAN 245
            ++ +    V T     +   PEE      +  F  F    A+ +           +VA 
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238

Query: 246 AVLFLASDE---ARYISGTNLM 264
             L          RY +    +
Sbjct: 239 VFLTALRAPKPTLRYFTTERFL 260

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  136 bits (342), Expect = 3e-39
 Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 22/264 (8%)

Query: 15  RLVGRVALITGGATGIGESTVRLFHK---HGAKVCIADVQDNLGQQVCQSLGGE---PDT 68
            L   V ++TG + G G +      +    G+ + ++   +++ +Q+ + LG +      
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 69  FFCHCDVTKEEDVCSAVDLTVE----KFGTLDIMVNNAGISG-APCPDIREADLSEFEKV 123
                D+  E  V   +    E    +     +++NNA   G      +   DL+E    
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 124 FDINVKGVFHGMKHAARIM--IPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKN 181
           + +N+  +              P    T+++I S+       G   Y   K A   L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 182 VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTAN 241
           +AAE  +  +RV   +P  +   +      E  +  +     +   +      G  +   
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDM-QQLARETSKDPELRSKLQKLKS-----DGALVDCG 234

Query: 242 DVANAVLFLASDEARYISGTNLMV 265
             A  +L L   +  + SG ++  
Sbjct: 235 TSAQKLLGLLQKDT-FQSGAHVDF 257

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  132 bits (333), Expect = 4e-38
 Identities = 58/283 (20%), Positives = 103/283 (36%), Gaps = 62/283 (21%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKE 78
            + +I+G ATGIG +T ++    G ++   D++D                     D++  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----------------ADLSTA 45

Query: 79  EDVCSAV-DLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           E    A+ D+  +    +D +V  AG+                  V  +N  G    M  
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGP---------QTKVLGNVVSVNYFGATELMDA 96

Query: 138 AAR---------------------------IMIPQTKGTIISICSVAGAIGGLGPH-AYT 169
                                         + +    G      ++    G  G + AY 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR 229
           GSK+A+    +  AA  G+ G+R+N ++P A  T L  A L +    E         +A+
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGES--------IAK 208

Query: 230 NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV 272
                G     +++A+ + FL S  A Y+ G  +++DGG  +V
Sbjct: 209 FVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  132 bits (331), Expect = 1e-37
 Identities = 44/260 (16%), Positives = 93/260 (35%), Gaps = 11/260 (4%)

Query: 15  RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH 72
            L G+  LI G A    I     +     GA +    + ++L ++V          +   
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYE 61

Query: 73  CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVF 132
            DV+KEE   S  +   +  G+LD +V++   +     +    + S+      + +    
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 133 HGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                     +     +++++  +         +    +K A+    + +A +LGK+ IR
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIR 181

Query: 193 VNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS 252
           VN +S   + T  +          +                    ++  +V NA ++L S
Sbjct: 182 VNALSAGPIRTLASSGIADFRMILKWNE---------INAPLRKNVSLEEVGNAGMYLLS 232

Query: 253 DEARYISGTNLMVDGGFTSV 272
             +  +SG    VD G+  +
Sbjct: 233 SLSSGVSGEVHFVDAGYHVM 252

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  128 bits (323), Expect = 1e-36
 Identities = 40/230 (17%), Positives = 71/230 (30%), Gaps = 27/230 (11%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
               ++TG   GIG   V+   K      +           ++                V
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVL--PLTV 60

Query: 76  TKEEDVCSAVDLTVEKFGT--LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           T ++ + + V    E  G+  L +++NNAG+  +      E + +   +  D+N   V  
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGT-NTEPNRAVIAEQLDVNTTSVVL 119

Query: 134 GMKHAARIMIPQTKGTIISICSV------------------AGAIGGLGPHAYTGSKHAV 175
             +    ++            SV                            AY  SK A+
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLA--LAHLPEEERTEDAMVGF 223
               + +A +L    + V    P  V T L    A L  E+ T + +  F
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSF 229

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 1e-33
 Identities = 52/291 (17%), Positives = 85/291 (29%), Gaps = 79/291 (27%)

Query: 19  RVALITGGATGIGESTVRLFHK-HGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVT 76
            VAL+TGG  GIG + VR   +     V +       GQ   Q L  E     F   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 77  KEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK 136
             + + +  D   +++G LD++VNNAGI+             + E     N  G      
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCT 121

Query: 137 HAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS------------------------- 171
               ++ PQ  G ++++ S+                                        
Sbjct: 122 ELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179

Query: 172 ----------------KHAVLGLNKNVAAELGKY----GIRVNCVSPYAVATGLALAHLP 211
                           K  V  L++  A +L +      I +N   P  V T +A     
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT 239

Query: 212 EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA--SDEARYISG 260
                                      +  + A   ++LA    +A    G
Sbjct: 240 --------------------------KSPEEGAETPVYLALLPPDAEGPHG 264

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  121 bits (302), Expect = 2e-33
 Identities = 51/264 (19%), Positives = 88/264 (33%), Gaps = 6/264 (2%)

Query: 15  RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGGEPDTF-F 70
            L G+  L++G  T   I     R+  + GA++ +       L Q++   L  +      
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 71  CHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKG 130
              +      +   V   +     LD +V++ G        I     + +  V       
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 131 VFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG 190
            +     A  ++     G  I       +      +  T +K A+  +N+ VA E GKYG
Sbjct: 123 AYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182

Query: 191 IRVNCVSPYAVATGLALAHLPEEERTEDAMV--GFRNFVARNANMQGTELTANDVANAVL 248
           +R N V+   + T    A +      E             + A +      A  VA  V 
Sbjct: 183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC 242

Query: 249 FLASDEARYISGTNLMVDGGFTSV 272
            L SD     +G  +  DGG  + 
Sbjct: 243 ALLSDWLPATTGDIIYADGGAHTQ 266

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  120 bits (302), Expect = 2e-33
 Identities = 66/289 (22%), Positives = 99/289 (34%), Gaps = 50/289 (17%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIADVQ-----DNLGQQVCQSLGGEPDTFFCH-- 72
           VAL+TG A  +G S     H  G  VC+   +     + L   +         T      
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 73  -------------CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGA------------ 107
                          VT        V      +G  D++VNNA                 
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 108 PCPDIREADLSEFEKVFDINVKGVF------HGMKHAARIMIPQTKGTIISICSVAGAIG 161
           PC   REA  +    +F  N    +                   T  +II++        
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV 221
            LG   YT +K A+ GL ++ A EL    IRVN V P                  +D   
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL------------VDDMPP 231

Query: 222 GFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT 270
                      +   + +A +V++ V+FL S +A+YI+GT + VDGG++
Sbjct: 232 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  116 bits (292), Expect = 3e-32
 Identities = 37/260 (14%), Positives = 82/260 (31%), Gaps = 35/260 (13%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
           G+V ++ GG   +G + +  F K+G  V   D+  N                  + + T+
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-------DQADSNILVDGNKNWTE 54

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
           +E        +  +   +D +   AG          +  +   + +   +V       K 
Sbjct: 55  QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA-SSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYG--IRVNC 195
                  +  G +    + A          Y  +K AV  L  ++AA+         V  
Sbjct: 114 --ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLT 171

Query: 196 VSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-FLASDE 254
           + P  + T +    +P  +                     +    + ++  +L +     
Sbjct: 172 IMPVTLDTPMNRKWMPNADH-------------------SSWTPLSFISEHLLKWTTETS 212

Query: 255 ARYISGTNLMV--DGGFTSV 272
           +R  SG  L +  + G +++
Sbjct: 213 SRPSSGALLKITTENGTSTI 232

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  104 bits (259), Expect = 2e-27
 Identities = 43/269 (15%), Positives = 76/269 (28%), Gaps = 46/269 (17%)

Query: 19  RVALITGGATGIGESTVRLF---HKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDV 75
              LITG   G+G   V+      +    +          +++        +      D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 76  TKEEDV--CSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
              +      A    V K   L+++ NNAGI+      I      E       N      
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAP-KSARITAVRSQELLDTLQTNTVVPIM 121

Query: 134 GMKHAARIMIPQTKGTIISI-----------CSVAGAIGGL---GPHAYTGSKHAVLGLN 179
             K    ++    K                  S+ G+I G    G +AY  SK A+    
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELT 239
           K+++ +L    I    + P  V T +  +  P                           +
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPL----------------------DVPTS 219

Query: 240 ANDVANAVLFLASDEARYISGTNLMVDGG 268
              +   +  L   +    +G  +  DG 
Sbjct: 220 TGQIVQTISKLGEKQ----NGGFVNYDGT 244

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  101 bits (250), Expect = 2e-25
 Identities = 44/325 (13%), Positives = 90/325 (27%), Gaps = 71/325 (21%)

Query: 18  GRVALITGGA--TGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----------- 64
             +  I G     G G    +   K   K+            +     G           
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 65  ----------------------EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMVNNA 102
                                 E        ++ +   +    +L  +K+G ++++V++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 103 GISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG 162
             +     D+       +      +   +    K+   IM PQ+   I      +  +  
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSS-IISLTYHASQKVVP 180

Query: 163 LGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV 221
                 + +K A+    + +A  LG  Y IR+N +S   + +  A A        E+   
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 222 GFRNFVARNANMQGTEL----------------------------------TANDVANAV 247
             +N    + +                                         + D+ +  
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVA 300

Query: 248 LFLASDEARYISGTNLMVDGGFTSV 272
            FL S E+R I+G  + VD G   +
Sbjct: 301 SFLLSRESRAITGQTIYVDNGLNIM 325

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 97.1 bits (240), Expect = 3e-24
 Identities = 55/297 (18%), Positives = 90/297 (30%), Gaps = 44/297 (14%)

Query: 15  RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPD----- 67
            L G+ A I G A   G G +  +     GA++ +      L         G+ D     
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 68  ----------------------------TFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV 99
                                               +    V  A +   + FG++DI+V
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA 159
           ++          + E     +      +       + H   IM P      ++  +    
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184

Query: 160 IGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA 219
           I G G    +                  K  IRVN +S   + +  A A    +      
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT----- 239

Query: 220 MVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNHSL 276
                 +   NA +    LTA++V NA  FL S  A  I+G  + VD G  S+  +L
Sbjct: 240 ---MIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVAL 292

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 82.2 bits (202), Expect = 1e-19
 Identities = 26/194 (13%), Positives = 55/194 (28%), Gaps = 22/194 (11%)

Query: 14  QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHC 73
             + G+ A++  G   +G  +  L    GA+V +   + +  Q    S+           
Sbjct: 19  GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA 78

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           +   +     A             +     I       +     + ++    I +   ++
Sbjct: 79  ETADDASRAEA-------VKGAHFVFTAGAIG------LELLPQAAWQNESSIEIVADYN 125

Query: 134 GMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIR 192
                    I  T KG         GA+G +G       +  +  L ++         I 
Sbjct: 126 AQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKLFESSEGVFDAEEI- 183

Query: 193 VNCVSPYAVATGLA 206
                 Y +A  +A
Sbjct: 184 ------YKLAKEMA 191

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 67.0 bits (162), Expect = 1e-13
 Identities = 32/227 (14%), Positives = 63/227 (27%), Gaps = 23/227 (10%)

Query: 18  GRVALITGGATGIGESTVRLFHKHGAKVCI----ADVQDNLGQQVCQSLGGEPDTFFCHC 73
               L+TGG  G+G    R   + GA   +    +    +   ++   L           
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
               + +    +   +     L  + +    +      +        E+           
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHA--AATLDDGTVDTLTGERIERASRAK----VL 122

Query: 134 GMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRV 193
           G ++   +         +   S A A G  G   Y      + GL    A +    G+  
Sbjct: 123 GARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL----AQQRRSDGLPA 178

Query: 194 NCVSPYAVA-TGLALAHLPEEER--------TEDAMVGFRNFVARNA 231
             V+    A +G+A   + +  R         E A    +N + R  
Sbjct: 179 TAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAE 225

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 63.2 bits (152), Expect = 1e-12
 Identities = 18/190 (9%), Positives = 46/190 (24%), Gaps = 4/190 (2%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTK 77
           RVA + GG   +G+         G ++ +   ++   +           D          
Sbjct: 2   RVA-LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
             + C    LT+     +D   +   I       +    +                  + 
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNIL--REKIVVSPLVPVSRGAKGFTYSSERSAAEI 118

Query: 138 AARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVS 197
            A ++  +   + +     A          +          +K V   L      +  + 
Sbjct: 119 VAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLD 178

Query: 198 PYAVATGLAL 207
              ++    +
Sbjct: 179 AGPLSNSRLV 188

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 8/65 (12%), Positives = 17/65 (26%)

Query: 18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK 77
          G+   +TG     G          GA V    +       + ++            D+  
Sbjct: 8  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD 67

Query: 78 EEDVC 82
          +  + 
Sbjct: 68 QNKLL 72

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTK 77
          R AL+TG     G    +L  + G +V     + +   +   + LG E D  +   D+  
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 78 EEDVC 82
             V 
Sbjct: 61 ACSVQ 65

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 28/188 (14%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLG----QQVCQSLGGEPDTFFCHCDVTK 77
           LITGGA  IG + VR   K+     +    D L      +    +       F H D+  
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNI--DKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 78  EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKH 137
             ++         +    D +++ A  S           ++      + N+ G +  ++ 
Sbjct: 62  SAEITRIF-----EQYQPDAVMHLAAESHVD------RSITGPAAFIETNIVGTYALLEV 110

Query: 138 AARIMIP---QTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVN 194
           A +         K            + G  PH         L L     A          
Sbjct: 111 ARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA--------YA 162

Query: 195 CVSPYAVA 202
             SPY+ +
Sbjct: 163 PSSPYSAS 170

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 26/198 (13%), Positives = 49/198 (24%), Gaps = 28/198 (14%)

Query: 19  RVALITGGATGIGESTVRLFHKHGAKV-CIADVQDNLGQQVCQSLGGEPDTF------FC 71
            VALITG     G        + G +V  I     +      + L   P           
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 72  HCDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGV 131
           + D+T    +   ++    +    +I    A        D         E   D++  G 
Sbjct: 62  YGDLTDSTCLVKIIN----EVKPTEIYNLGAQSHVKISFD-------LAEYTADVDGVGT 110

Query: 132 FHGMKHAARIMIPQTKGTI-ISICSVAGAIGG--------LGPH-AYTGSKHAVLGLNKN 181
              +       +  +      S   + G +            P   Y  +K     +  N
Sbjct: 111 LRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVN 170

Query: 182 VAAELGKYGIRVNCVSPY 199
                  + +     +  
Sbjct: 171 FREAYNLFAVNGILFNHE 188

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 38.6 bits (88), Expect = 5e-04
 Identities = 27/138 (19%), Positives = 40/138 (28%), Gaps = 13/138 (9%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTKEED 80
           LITGG   +G +        G  + + D     G       L    +  F H D+  + D
Sbjct: 4   LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKND 63

Query: 81  VCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAAR 140
           V   +          D   + A              +      F+INV G  + +  A R
Sbjct: 64  VTRLI-----TKYMPDSCFHLA------GQVAMTTSIDNPCMDFEINVGGTLN-LLEAVR 111

Query: 141 IMIPQTKGTIISICSVAG 158
                      S   V G
Sbjct: 112 QYNSNCNIIYSSTNKVYG 129

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 28/199 (14%), Positives = 52/199 (26%), Gaps = 32/199 (16%)

Query: 20  VALITGGATGIGESTVRLFHKHGAKVCIAD------VQDNLGQQVCQSLGGEPDTFFCHC 73
           VALITG     G        + G +V            + +           P     + 
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 74  DVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFH 133
           D++   ++   +     +    D + N   +S               E   D++  G   
Sbjct: 63  DLSDTSNLTRIL-----REVQPDEVYNLGAMSHVAVS------FESPEYTADVDAMGTLR 111

Query: 134 GMKHAARIMIPQTKGTII--SICSVAGAIGG--------LGPH-AYTGSKHAVLGLNKNV 182
            +  A R +  + K      S   + G +            P   Y  +K     +  N 
Sbjct: 112 -LLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNY 170

Query: 183 AAELGKYGIRVNCVSPYAV 201
                 YG+       +  
Sbjct: 171 RE---SYGMYACNGILFNH 186

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 22  LITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEE 79
           L+TGG+  IG  T     ++G  V I D   N  + V   +   G     F   D+  E 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 80  DVCSAVDLTVEKFGTLDIMVNNAGISGAP 108
            +       +     +D +++ AG+    
Sbjct: 64  LMTE-----ILHDHAIDTVIHFAGLKAVG 87

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.1 bits (81), Expect = 0.004
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 18 GRVALITGGATGIGESTVRLFHKHGAKVCIAD 49
          G   ++ GG    G +T     K   +VCI D
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	280
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.86
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.84
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.8
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.78
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.76
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.74
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.74
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.74
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.74
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.74
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.74
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.73
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.72
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.72
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.71
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.71
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.7
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.68
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.65
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.65
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.58
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.38
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.33
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.27
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.21
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.21
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.17
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.1
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.97
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.22
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.12
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.09
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.05
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.04
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.99
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.94
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.94
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.85
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.82
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.8
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.8
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.71
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.68
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.66
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.6
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.59
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.51
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.5
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.48
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.41
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.35
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.29
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.23
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.21
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.17
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.17
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.16
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.15
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.14
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.13
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.1
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.07
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.06
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.03
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.0
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.98
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.93
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.89
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.88
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.87
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.8
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.77
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.74
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.65
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.63
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.52
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.49
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.47
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.47
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.45
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.41
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.4
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.38
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.38
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.36
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.32
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.3
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.29
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.28
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.24
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.14
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.13
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.04
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.03
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.01
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.0
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.94
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.87
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.87
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.84
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.78
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.7
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.66
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.38
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.31
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.29
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.29
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.27
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.21
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.19
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.16
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.07
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.07
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.93
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.82
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.79
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	94.75
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.72
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.71
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.67
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.64
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.52
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.51
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.21
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.14
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.11
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.84
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.81
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.78
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.74
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.7
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.57
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.52
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.51
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.49
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.44
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.41
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.13
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.01
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.0
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.94
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.78
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.77
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.65
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.53
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	92.52
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.39
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.35
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.13
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.1
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.01
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.88
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.84
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	91.51
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.5
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.41
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	91.35
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.85
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.77
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	90.75
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	90.72
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.61
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.55
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	90.43
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.33
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.17
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	90.1
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.05
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	89.66
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	89.63
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	89.5
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	89.48
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	89.47
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	89.26
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.24
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	89.0
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	88.84
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	88.84
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.4
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	88.35
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	88.26
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	88.15
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	87.94
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	87.94
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	87.81
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.73
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	87.71
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	87.7
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	87.44
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.32
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	87.16
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	86.99
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.98
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	86.82
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	86.58
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	86.37
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	86.34
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	86.14
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	86.04
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	85.82
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.77
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	85.62
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	85.5
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	85.4
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	85.1
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	84.79
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	84.5
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	84.47
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.11
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	84.03
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	83.14
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	82.95
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.92
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	82.57
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	82.31
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.14
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	81.48
d7reqa2	168	Methylmalonyl-CoA mutase alpha subunit, C-terminal	81.45
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	81.37
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	81.2
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	81.16
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	80.87
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	80.44
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	80.43

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.4e-58  Score=382.17  Aligned_cols=242  Identities=33%  Similarity=0.492  Sum_probs=223.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      ||+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++  .+..++.+|++++++++++++++.+++|+
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--ANGKGLMLNVTDPASIESVLEKIRAEFGE   78 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence            6899999999999999999999999999999999999999999888876  46778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.++|+++|+|.+++.|+||++||..+..+.++...|++||+|
T Consensus        79 iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  156 (243)
T d1q7ba_          79 VDILVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG  156 (243)
T ss_dssp             CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             cceehhhhhhccc--cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence            9999999999866  88999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++|+|++|.|++++|||||+|+||+++|++.....+..          ....... .+.+|+.+|+|+|++++||+|+.
T Consensus       157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~----------~~~~~~~-~pl~R~~~pedvA~~v~fL~S~~  225 (243)
T d1q7ba_         157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQ----------RAGILAQ-VPAGRLGGAQEIANAVAFLASDE  225 (243)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHH----------HHHHHTT-CTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhH----------HHHHHhc-CCCCCCCCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999987654321          1222233 34599999999999999999999


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ++|+|||+|.+|||+++
T Consensus       226 s~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         226 AAYITGETLHVNGGMYM  242 (243)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             hcCCcCCeEEECCCeEe
Confidence            99999999999999876

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=7.9e-57  Score=380.88  Aligned_cols=256  Identities=49%  Similarity=0.794  Sum_probs=230.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.....+.++.||++++++++++++++.+++|+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999999999999999999987677888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc-cchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH-AYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~-~Y~~sK~  173 (280)
                      +|++|||||+....+..+.+.+.++|++.+++|+.+++.++|+++|+|.+++.|+||+++|..+..+.++.. .|+++|+
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKa  162 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  162 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHH
Confidence            999999999876533568899999999999999999999999999999998899999999999998877654 8999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      |+++|+|++|.||+++|||||+|+||+++|++....+......      ...+......+.+|+.+|+|||++++||+|+
T Consensus       163 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~------~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~  236 (268)
T d2bgka1         163 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSR------VEELAHQAANLKGTLLRAEDVADAVAYLAGD  236 (268)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHH------HHHHHHHTCSSCSCCCCHHHHHHHHHHHHSG
T ss_pred             HHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHH------HHHHHHhccccCCCCcCHHHHHHHHHHHhCh
Confidence            9999999999999999999999999999999988766543322      2222233445668999999999999999999


Q ss_pred             CCCCeeecEEEeCCccccccccc
Q 023613          254 EARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      +++|+|||+|.+|||++.++|.+
T Consensus       237 ~s~~itGq~i~VDGG~t~~~p~~  259 (268)
T d2bgka1         237 ESKYVSGLNLVIDGGYTRTNPAF  259 (268)
T ss_dssp             GGTTCCSCEEEESTTGGGCCTHH
T ss_pred             hhCCccCceEEECcCcccCCCCC
Confidence            99999999999999999988753

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=6.3e-57  Score=376.73  Aligned_cols=245  Identities=32%  Similarity=0.437  Sum_probs=209.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++... +...+...  .++.++.||++|+++++++++++.+++|
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG--RRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcC--CcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999999987533 33333333  5788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|++||+
T Consensus        80 ~iDilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  157 (247)
T d2ew8a1          80 RCDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA  157 (247)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhc
Confidence            99999999999765  8999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      |+.+|+|++|.|++++|||||+|+||+++|++..........         ........+.+|+.+|+|+|++++||+|+
T Consensus       158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~---------~~~~~~~~~l~r~~~pedvA~~v~fL~S~  228 (247)
T d2ew8a1         158 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMF---------DVLPNMLQAIPRLQVPLDLTGAAAFLASD  228 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------------CTTSSSCSCCCTHHHHHHHHHHTSG
T ss_pred             cHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhH---------HHHHHHhccCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999997765433211         11122233558999999999999999999


Q ss_pred             CCCCeeecEEEeCCccccc
Q 023613          254 EARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~  272 (280)
                      .++|+||++|.+|||++++
T Consensus       229 ~s~~itG~~i~vDGG~~~h  247 (247)
T d2ew8a1         229 DASFITGQTLAVDGGMVRH  247 (247)
T ss_dssp             GGTTCCSCEEEESSSCCCC
T ss_pred             hhcCCcCCeEEECCCEecC
Confidence            9999999999999999864

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.4e-57  Score=378.40  Aligned_cols=247  Identities=32%  Similarity=0.498  Sum_probs=220.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++..  ..++.++.||++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999888877766532  357888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~  170 (280)
                      +|++|++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|.|.+++.|+||+++|..+. .+.+++..|++
T Consensus        81 ~g~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~a  158 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAA  158 (251)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHH
Confidence            9999999999998765  89999999999999999999999999999999999989999999997764 46778899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+.+|+|+++.|++++|||||+|+||+++|++........+.        .....+. .+.+|+.+|+|||++++||
T Consensus       159 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~--------~~~~~~~-~pl~R~~~pedvA~~v~fL  229 (251)
T d1vl8a_         159 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEK--------LDYMLKR-IPLGRTGVPEDLKGVAVFL  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHH--------HHHHHHT-CTTSSCBCGGGGHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHH--------HHHHHhc-CCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999997654432211        1222233 3459999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|++++|+|||+|.+|||++.
T Consensus       230 ~S~~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         230 ASEEAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCchhCCCcCcEEEeCcCeeC
Confidence            999999999999999999974

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.8e-57  Score=378.31  Aligned_cols=245  Identities=27%  Similarity=0.421  Sum_probs=220.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.|++|++|||||++|||+++|+.|+++|++|++++|+++.++++.+++... .++.++.+|++++++++++++++.+.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999888887643 57889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++..+|++|
T Consensus        85 ~g~iDilvnnag~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~as  162 (251)
T d2c07a1          85 HKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS  162 (251)
T ss_dssp             CSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCceeeeeccccccc--cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHH
Confidence            9999999999998766  88999999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|+|++|.||+++|||||+|+||+++|++.....+.          ..+...... +.+|+.+|+|+|++++||+
T Consensus       163 Kaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~----------~~~~~~~~~-pl~R~~~pedvA~~v~fL~  231 (251)
T d2c07a1         163 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ----------IKKNIISNI-PAGRMGTPEEVANLACFLS  231 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH----------HHHHHHTTC-TTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH----------HHHHHHhcC-CCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999997664321          222223333 4599999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccc
Q 023613          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      |++++|+||++|.+|||++
T Consensus       232 S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         232 SDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CchhCCCcCcEEEECCCcC
Confidence            9999999999999999975

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.1e-57  Score=377.29  Aligned_cols=247  Identities=31%  Similarity=0.495  Sum_probs=223.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. ..++.++.||++++++++++++++.+.
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999999888887754 357889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|++|||||+...  .++ +.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.++..+|+++
T Consensus        86 ~g~iDilvnnAG~~~~--~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~as  162 (255)
T d1fmca_          86 LGKVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_dssp             HSSCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEeeeCCcCCCC--Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhH
Confidence            9999999999998764  555 7899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+.+|+|++|.|++++|||||+|+||+++|++.....+.+.         .....+. .+.+|+.+|+|||++++||+
T Consensus       163 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~---------~~~~~~~-~pl~R~g~pedvA~~v~fL~  232 (255)
T d1fmca_         163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI---------EQKMLQH-TPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHH---------HHHHHHT-CSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHH---------HHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999877654321         1122233 45599999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+.+.|+||++|.+|||+.+.
T Consensus       233 S~~s~~itG~~i~vDGG~~~~  253 (255)
T d1fmca_         233 SPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSCCC
T ss_pred             CchhcCCcCCEEEECcCcccc
Confidence            999999999999999998753

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=2.8e-56  Score=373.63  Aligned_cols=244  Identities=34%  Similarity=0.524  Sum_probs=222.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++....++.++.||++++++++++++++.+.+|+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999999999999999999998876678999999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCC-ceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTK-GTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++. ++||++||..+..+.++...|+++|+
T Consensus        83 iDiLVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          83 VSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             ceEEEeccccccc--cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            9999999999866  88999999999999999999999999999999988875 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--HCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          174 AVLGLNKNVAAE--LGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e--~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+.+|++.+|.|  ++++|||||+|+||+++|++.......+..         .. .....+.+|+.+|+|+|++++||+
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~---------~~-~~~~~pl~R~~~pedvA~~v~fL~  230 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEA---------MS-QRTKTPMGHIGEPNDIAYICVYLA  230 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHH---------HT-STTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHH---------HH-HHhCCCCCCCcCHHHHHHHHHHHh
Confidence            999999999998  568999999999999999998765433211         11 122345699999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccc
Q 023613          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      |++++|+||+.|.+|||++
T Consensus       231 S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         231 SNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CchhCCCcCcEEEECcccc
Confidence            9999999999999999986

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1e-56  Score=377.96  Aligned_cols=253  Identities=25%  Similarity=0.350  Sum_probs=226.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.+++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999999999999988888754 3578889999999999999999999998


Q ss_pred             C-CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 G-TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~-~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      + ++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||+++|..+..+.++...|+++
T Consensus        84 ~~~idilvnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  161 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  161 (259)
T ss_dssp             TTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCceEEEECCceecc--CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHH
Confidence            6 79999999999765  88999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|+|++|.||+++|||||+|+||+++|++...........+    ....+ .. ..+.+|+.+|+|||++++||+
T Consensus       162 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~----~~~~~-~~-~~pl~R~g~pedvA~~v~fL~  235 (259)
T d2ae2a_         162 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKE----NLNKL-ID-RCALRRMGEPKELAAMVAFLC  235 (259)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHH----HHHHH-HH-TSTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHH----HHHHH-Hh-cCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999766544322111    12222 22 344599999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      |+.++|+|||+|.+|||++..-|
T Consensus       236 S~~s~~itG~~i~VDGG~~a~~G  258 (259)
T d2ae2a_         236 FPAASYVTGQIIYVDGGLMANCG  258 (259)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCSC
T ss_pred             CchhCCCcCcEEEECCCeEeeCC
Confidence            99999999999999999987543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.6e-56  Score=372.85  Aligned_cols=240  Identities=38%  Similarity=0.601  Sum_probs=221.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.  .++.++.||++++++++++++++.++++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--DAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--CcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999999999999999999998888876  4677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.++|+++|.|.+++.|+||++||..+..+.+++..|+++|+
T Consensus        80 ~idilinnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  157 (244)
T d1nffa_          80 GLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  157 (244)
T ss_dssp             CCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCeEEEECCcccCC--CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHH
Confidence            99999999998765  8899999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      |+++|+|.+|.||+++|||||+|+||+++|++.......                ....+.+|+.+|+|+|++++||+|+
T Consensus       158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~----------------~~~~pl~R~~~p~diA~~v~fL~s~  221 (244)
T d1nffa_         158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----------------IFQTALGRAAEPVEVSNLVVYLASD  221 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT----------------CSCCSSSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH----------------HHhccccCCCCHHHHHHHHHHHhCh
Confidence            999999999999999999999999999999997543221                1123459999999999999999999


Q ss_pred             CCCCeeecEEEeCCcccccc
Q 023613          254 EARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~  273 (280)
                      .++|+|||+|.+|||++.+-
T Consensus       222 ~s~~itG~~i~vDGG~~ag~  241 (244)
T d1nffa_         222 ESSYSTGAEFVVDGGTVAGL  241 (244)
T ss_dssp             GGTTCCSCEEEESTTGGGSC
T ss_pred             hhCCCcCCEEEECCCeeccc
Confidence            99999999999999998653

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=9.3e-57  Score=377.86  Aligned_cols=253  Identities=32%  Similarity=0.508  Sum_probs=221.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---CCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++   ....++.++.||++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999998888776665   23457889999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|+||||||+.... .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|+++
T Consensus        81 ~G~iDiLVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             HSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             hCCCCEEEECCcccccC-CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence            99999999999986432 67899999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+.+|+|+||.|++++|||||+|+||+++|++........... .. .......... .+.+|+.+|+|+|++++||+
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~-~~-~~~~~~~~~~-~pl~R~~~p~dvA~~v~fL~  236 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE-NP-RKAAEEFIQV-NPSKRYGEAPEIAAVVAFLL  236 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT-CH-HHHHHHHHTT-CTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcc-cH-HHHHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999976543221100 00 1122222233 34599999999999999999


Q ss_pred             CCCCCCeeecEEEeCCcccc
Q 023613          252 SDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+.++|+||++|.+|||++.
T Consensus       237 S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         237 SDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CchhcCCcCceEEcCcchhc
Confidence            99999999999999999974

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=7e-57  Score=378.48  Aligned_cols=253  Identities=31%  Similarity=0.418  Sum_probs=222.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.++++  .++.++.||++++++++++++++.+++|+
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG--PAACAIALDVTDQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999999999999999988886  46888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.++ ..|+||++||..+..+.++...|+++|+
T Consensus        80 iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  157 (256)
T d1k2wa_          80 IDILVNNAALFDL--APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKA  157 (256)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             ccEEEeecccccc--cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhh
Confidence            9999999998765  889999999999999999999999999999986654 4699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhh-hhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAM-VGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      |+.+|++.+|.||+++|||||+|+||+++|++............... .......... .|.+|+.+|+|||++++||+|
T Consensus       158 al~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~PlgR~~~p~evA~~v~fL~S  236 (256)
T d1k2wa_         158 AVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAA-VPFGRMGRAEDLTGMAIFLAT  236 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHH-STTSSCBCHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999765432211111100 1112222233 445999999999999999999


Q ss_pred             CCCCCeeecEEEeCCccccc
Q 023613          253 DEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++++|+|||.|.+|||.+++
T Consensus       237 ~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         237 PEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             GGGTTCCSCEEEESTTSSCC
T ss_pred             chhCCccCceEEECcchhhC
Confidence            99999999999999998763

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.8e-57  Score=381.29  Aligned_cols=253  Identities=27%  Similarity=0.373  Sum_probs=201.2

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999999888877754 357889999999999999999999999


Q ss_pred             c-CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           92 F-GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      + |++|++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||++||..+..+.++...|++
T Consensus        83 ~~g~idilvnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  160 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSA  160 (259)
T ss_dssp             HTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHH
T ss_pred             hCCCcccccccccccCC--CchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccc
Confidence            8 689999999999866  8899999999999999999999999999999999888999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+.+|+|++|.|++++|||||+|+||+++|++.....+.+         ..+..... .+.+|+.+|+|||++++||
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~---------~~~~~~~~-~pl~R~~~pedvA~~v~fL  230 (259)
T d1xq1a_         161 TKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---------FKKVVISR-KPLGRFGEPEEVSSLVAFL  230 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------CCGGGGHHHHHHH
T ss_pred             cccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH---------HHHHHHhC-CCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999987654432         11222222 3459999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccccccccc
Q 023613          251 ASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      +|+.++|+||++|.+|||++..+.+++
T Consensus       231 ~S~~s~~iTG~~i~vDGG~s~~g~~~~  257 (259)
T d1xq1a_         231 CMPAASYITGQTICVDGGLTVNGFSYQ  257 (259)
T ss_dssp             TSGGGTTCCSCEEECCCCEEETTEEEC
T ss_pred             hCchhcCCcCcEEEeCCCEECCCCCCC
Confidence            999999999999999999998766553

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=7.6e-57  Score=379.34  Aligned_cols=252  Identities=31%  Similarity=0.465  Sum_probs=212.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      |+||++|||||++|||+++|++|+++|++|++++|++ +.++++.+++..  ..++.++.||++++++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999999974 555555555432  3578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||+++|..+..+.+++..|+++|
T Consensus        82 G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1x1ta1          82 GRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeecccccC--CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhh
Confidence            999999999999765  889999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhh--hhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTE--DAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+.+|++.+|.|++++|||||+|+||+++|++............  .........+.+. .|.+|+.+|+|+|++++||
T Consensus       160 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Pl~R~g~pediA~~v~fL  238 (260)
T d1x1ta1         160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK-QPSLQFVTPEQLGGTAVFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH-CTTCCCBCHHHHHHHHHHH
T ss_pred             hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhc-CCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999876543321111  1111122223333 3459999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCccc
Q 023613          251 ASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +|+.++|+|||+|.+|||++
T Consensus       239 ~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         239 ASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hChhhCCCcCCEEEECcchh
Confidence            99999999999999999986

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.7e-56  Score=373.98  Aligned_cols=245  Identities=32%  Similarity=0.474  Sum_probs=215.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++..+ ..+.+.    ..+++||++++++++++++++.+++|+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~~----~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIG----GAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHHT----CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcC----CeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            488999999999999999999999999999999999987644 344443    356899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+..+  .++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||+++|..+..+.++...|+++|+|
T Consensus        77 iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  154 (248)
T d2d1ya1          77 VDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  154 (248)
T ss_dssp             CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCeEEEeCcCCCC--CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence            9999999999865  88999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +.+|+|.+|.|++++|||||+|+||+++|++...........+.    ........ .+.+|+.+|+|+|++++||+|+.
T Consensus       155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~----~~~~~~~~-~pl~R~~~pedia~~v~fL~S~~  229 (248)
T d2d1ya1         155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPER----TRRDWEDL-HALRRLGKPEEVAEAVLFLASEK  229 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC------------CHHHHTT-STTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHH----HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999987654322211111    22222333 34599999999999999999999


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ++|+|||+|.+|||++.
T Consensus       230 s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         230 ASFITGAILPVDGGMTA  246 (248)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCCCCcEEEcCcCccc
Confidence            99999999999999975

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1e-56  Score=376.20  Aligned_cols=244  Identities=37%  Similarity=0.507  Sum_probs=222.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.  .++.++.||++++++++++++++.+++|+
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG--GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999999999988887775  56888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.++...|+++|+|
T Consensus        80 iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  157 (254)
T d1hdca_          80 VDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             CCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             ccEEEecCccccc--cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence            9999999999766  88999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCC-CHHHHHHHHHHhcCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL-TANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~L~s~  253 (280)
                      +.+|+|+||.|++++|||||+|+||+++|++..+..+.....          ..+ ..+.+|+. .|+|||++++||+|+
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~----------~~~-~~pl~R~g~~PedvA~~v~fL~S~  226 (254)
T d1hdca_         158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEG----------NYP-NTPMGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTT----------SCT-TSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHH----------HHh-CCCCCCCCCCHHHHHHHHHHHhch
Confidence            999999999999999999999999999999976544332111          112 23458886 699999999999999


Q ss_pred             CCCCeeecEEEeCCcccccc
Q 023613          254 EARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~~~  273 (280)
                      +++|+||++|.+|||++..-
T Consensus       227 ~a~~itG~~i~vDGG~t~gp  246 (254)
T d1hdca_         227 TSSYVTGAELAVDGGWTTGP  246 (254)
T ss_dssp             GGTTCCSCEEEESTTTTTSC
T ss_pred             hhCCCCCceEEeCCCccCCC
Confidence            99999999999999998743

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.9e-56  Score=376.45  Aligned_cols=249  Identities=31%  Similarity=0.436  Sum_probs=220.6

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|+.+ .++++.++++. ..++.++.||++++++++++++++.+
T Consensus         2 ~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34799999999999999999999999999999999999854 56666666643 35788899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCc-eEEEEccccccccCCCCccch
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKG-TIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .+|++|++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|+|.+++.+ +|+++||..+..+.++...|+
T Consensus        82 ~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~  159 (261)
T d1geea_          82 EFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCEeeccceecCC--cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccc
Confidence            99999999999999765  889999999999999999999999999999999887755 589999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|+|+.+|+|++|.|++++|||||+|+||+++|++.......++        ......+. .+.+|+.+|+|||++++|
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~--------~~~~~~~~-~pl~R~~~pediA~~v~f  230 (261)
T d1geea_         160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPE--------QRADVESM-IPMGYIGEPEEIAAVAAW  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHH--------HHHHHHTT-CTTSSCBCHHHHHHHHHH
T ss_pred             cCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHH--------HHHHHHhc-CCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999765432211        12222333 345999999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+|+.++|+|||+|.+|||+++.
T Consensus       231 L~S~~s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         231 LASSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhCchhcCCcCCeEEECCCeeCC
Confidence            99999999999999999999885

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.1e-56  Score=376.05  Aligned_cols=251  Identities=27%  Similarity=0.378  Sum_probs=219.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.. ..++.++.||++++++++++++++.+++|++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            89999999999999999999999999999999999999988887754 35788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhc--ccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIM--IPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l--~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      ++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|+|  .+++.|+||+++|..+..+.++...|+++|+|
T Consensus        82 ilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaa  159 (257)
T d2rhca1          82 VLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG  159 (257)
T ss_dssp             EEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             EEEecccccCC--CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHH
Confidence            99999999765  889999999999999999999999999999974  45567899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh-hhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED-AMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      +.+|+|+||.|++++|||||+|+||+++|+|............. ..+.....+... .|.+|+.+|+|+|++++||+|+
T Consensus       160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~PlgR~~~pedia~~v~fL~S~  238 (257)
T d2rhca1         160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR-VPIGRYVQPSEVAEMVAYLIGP  238 (257)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTT-STTSSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999997654321111000 001122222333 4459999999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      .++|+|||.|.+|||++.
T Consensus       239 ~s~~itG~~i~vDGG~~~  256 (257)
T d2rhca1         239 GAAAVTAQALNVCGGLGN  256 (257)
T ss_dssp             GGTTCCSCEEEESTTCCC
T ss_pred             hhcCCcCceEEECcCccc
Confidence            999999999999999864

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.6e-55  Score=366.98  Aligned_cols=240  Identities=33%  Similarity=0.479  Sum_probs=215.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+.++    ..++.||++++++++++++++.+++|+
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~Dv~~~~~v~~~~~~~~~~~g~   77 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG----AHPVVMDVADPASVERGFAEALAHLGR   77 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT----CEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----CeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4899999999999999999999999999999999999998888777554    567899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|.|.+++.+.++++|| .+..+.++...|+++|+|
T Consensus        78 iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaa  154 (242)
T d1ulsa_          78 LDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAG  154 (242)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHH
T ss_pred             ceEEEECCccccc--CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHH
Confidence            9999999999765  8899999999999999999999999999999999888888888777 467788999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +.+|+|++|.||+++|||||+|+||+++|++.....+.          ........ .+.+|+.+|+|+|++++||+|++
T Consensus       155 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~----------~~~~~~~~-~pl~R~~~pedia~~v~fL~S~~  223 (242)
T d1ulsa_         155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK----------VREKAIAA-TPLGRAGKPLEVAYAALFLLSDE  223 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH----------HHHHHHHT-CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHH----------HHHHHHhc-CCCCCCCCHHHHHHHHHHHhchh
Confidence            99999999999999999999999999999997654221          12222333 44599999999999999999999


Q ss_pred             CCCeeecEEEeCCccccc
Q 023613          255 ARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~  272 (280)
                      ++|+||++|.+|||++.+
T Consensus       224 s~~itG~~i~vDGG~t~g  241 (242)
T d1ulsa_         224 SSFITGQVLFVDGGRTIG  241 (242)
T ss_dssp             GTTCCSCEEEESTTTTTT
T ss_pred             hCCCCCcEEEECCCccCC
Confidence            999999999999999864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-56  Score=372.17  Aligned_cols=247  Identities=34%  Similarity=0.532  Sum_probs=217.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.   +..++.||++|+++++++++++.+++|+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~---~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP---GAVFILCDVTQEDDVKTLVSETIRRFGR   79 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT---TEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC---CCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999999999999999999988887765   5778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+.... .++++.+.++|++.+++|+.+++.++|+++|+|+++ +|+||++||..+..+.++...|+++|+|
T Consensus        80 iDilVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaa  157 (250)
T d1ydea1          80 LDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGA  157 (250)
T ss_dssp             CCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCEEEecccccccc-cccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhh
Confidence            99999999976432 678899999999999999999999999999999754 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +.+|+|++|.|++++|||||+|+||+++|++.............   ....+..  ..+.+|+.+|+|+|++++||+|+ 
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~---~~~~~~~--~~pl~R~g~p~eva~~v~fL~Sd-  231 (250)
T d1ydea1         158 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRA---SIREGML--AQPLGRMGQPAEVGAAAVFLASE-  231 (250)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHH---HHHHHHH--TSTTSSCBCHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHH---HHHHHHh--cCCCCCCCCHHHHHHHHHHHhCc-
Confidence            99999999999999999999999999999997654322211111   1222222  23459999999999999999986 


Q ss_pred             CCCeeecEEEeCCccccc
Q 023613          255 ARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~~  272 (280)
                      ++|+|||+|.+|||++++
T Consensus       232 a~~itG~~i~vDGG~~lG  249 (250)
T d1ydea1         232 ANFCTGIELLVTGGAELG  249 (250)
T ss_dssp             CTTCCSCEEEESTTTTSC
T ss_pred             cCCCcCCeEEECCCcccC
Confidence            789999999999999863

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1e-55  Score=366.78  Aligned_cols=235  Identities=31%  Similarity=0.414  Sum_probs=204.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+++..          .++..+.+|++|+++++++++++.+.++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   72 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQG   72 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhcC
Confidence            358999999999999999999999999999999999987643          2467789999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||+
T Consensus        73 ~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  150 (237)
T d1uzma1          73 PVEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA  150 (237)
T ss_dssp             SCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             CceEEEeeeccccc--ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHH
Confidence            99999999999765  8899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCC
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASD  253 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~  253 (280)
                      |+++|+|.++.|++++|||||+|+||+++|++.....+.          ..+...+. .+.+|+.+|+|+|++++||+|+
T Consensus       151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~----------~~~~~~~~-~pl~R~~~pedvA~~v~fL~S~  219 (237)
T d1uzma1         151 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER----------IQQGALQF-IPAKRVGTPAEVAGVVSFLASE  219 (237)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHH----------HHHHHGGG-CTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHH----------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999997654211          12222333 3459999999999999999999


Q ss_pred             CCCCeeecEEEeCCcccc
Q 023613          254 EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       254 ~~~~~~G~~i~~dgG~~~  271 (280)
                      +++|+||++|.+|||+++
T Consensus       220 ~s~~itG~~i~vdGG~~m  237 (237)
T d1uzma1         220 DASYISGAVIPVDGGMGM  237 (237)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             hhcCCcCCeEEECCCCCC
Confidence            999999999999999864

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.1e-55  Score=371.16  Aligned_cols=251  Identities=31%  Similarity=0.457  Sum_probs=219.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.. ..++.++.||++++++++++++++.+++|++|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            37899999999999999999999999999999999999988887754 35788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC-CceEEEEccccccccCCCCccchhhHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT-KGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      ++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|.|.+++ .++|+++||..+..+.++...|+++|+|+
T Consensus        81 ilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  158 (255)
T d1gega_          81 VIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  158 (255)
T ss_dssp             EEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEeccccccc--CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHH
Confidence            99999998765  8899999999999999999999999999999877664 58899999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhh-hhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA-MVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      .+|+|++|.|++++|||||+|+||+++|+++............. .........+. .+.+|+.+|+|+|++++||+|++
T Consensus       159 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pl~R~~~peevA~~v~fL~S~~  237 (255)
T d1gega_         159 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR-ITLGRLSEPEDVAACVSYLASPD  237 (255)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT-CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhc-CCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999976543221111100 01112222333 44599999999999999999999


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ++|+||+.|.+|||+.+
T Consensus       238 a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         238 SDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             hCCccCcEEEecCCEEe
Confidence            99999999999999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=8.1e-55  Score=365.97  Aligned_cols=254  Identities=24%  Similarity=0.350  Sum_probs=220.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++... ..+.++.||++++++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999999999999999988888777543 578888999999999999999999998


Q ss_pred             -CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           93 -GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|++|||||....  .++.+.+.++|++.+++|+.+++.+.+++.|.|.++..|+||+++|..+..+.+++..|+++
T Consensus        82 ~g~idilinnag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  159 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  159 (258)
T ss_dssp             TSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCcEEEecccccccc--CccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHH
Confidence             589999999999876  89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|+|.+|+|++++|||||+|+||+++||+............+    ....+... .+.+|+.+|+|+|++++||+
T Consensus       160 K~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~----~~~~~~~~-~plgR~~~pediA~~v~fL~  234 (258)
T d1ae1a_         160 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKE----EIDNFIVK-TPMGRAGKPQEVSALIAFLC  234 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHH----HHHHHHHH-STTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHH----HHHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998776544322222    22222233 34599999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccccccc
Q 023613          252 SDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                      |++++|+||++|.+|||++-.+|
T Consensus       235 S~~s~~itG~~i~vDGG~s~~g~  257 (258)
T d1ae1a_         235 FPAASYITGQIIWADGGFTANGG  257 (258)
T ss_dssp             SGGGTTCCSCEEEESTTGGGCSC
T ss_pred             ChhhCCCcCcEEEeCCCeeccCC
Confidence            99999999999999999998765

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.5e-55  Score=371.14  Aligned_cols=251  Identities=31%  Similarity=0.477  Sum_probs=220.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++... .++..+.||++++++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999999999888887643 5788999999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      ++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+++..|+++|+
T Consensus        82 ~iDilVnnaG~~~~~-~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1zema1          82 KIDFLFNNAGYQGAF-APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  160 (260)
T ss_dssp             CCCEEEECCCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCeehhhhcccccc-CccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence            999999999986432 6799999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchh-------hhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          174 AVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEE-------RTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       174 al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      |+.+|+|.+|.|++++|||||+|+||+++|++.........       ....+ +......... .|.+|+.+|+|+|++
T Consensus       161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~Pl~R~g~pedvA~~  238 (260)
T d1zema1         161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDP-KVVAQQMIGS-VPMRRYGDINEIPGV  238 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSH-HHHHHHHHHT-STTSSCBCGGGSHHH
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCH-HHHHHHHHhc-CCCCCCcCHHHHHHH
Confidence            99999999999999999999999999999998643221110       00000 1122222233 345999999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCc
Q 023613          247 VLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      ++||+|+.+.|+|||+|.+|||
T Consensus       239 v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         239 VAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHhCchhcCccCCeEEeCCC
Confidence            9999999999999999999998

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.8e-55  Score=365.86  Aligned_cols=240  Identities=31%  Similarity=0.492  Sum_probs=215.1

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEe-cCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIAD-VQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~-r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +++|||||++|||+++|++|+++|++|++.+ |+++.++++.+++.. ..++.++.||++++++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999875 566677777666643 35788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVL  176 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~  176 (280)
                      ++|||||....  .++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|+++|+|+.
T Consensus        82 iLVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          82 VVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ccccccccccc--cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            99999999866  8899999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc-CCCC
Q 023613          177 GLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA-SDEA  255 (280)
Q Consensus       177 ~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~-s~~~  255 (280)
                      +|+|.|+.|++++|||||+|+||+++|++.....+.          ..+..... .+.+|+.+|+|+|++++||+ |+.+
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~----------~~~~~~~~-~pl~R~~~p~dvA~~v~fLa~S~~a  228 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED----------MEKKILGT-IPLGRTGQPENVAGLVEFLALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH----------HHHHHHTS-CTTCSCBCHHHHHHHHHHHHHCSGG
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHH----------HHHHHHhc-CCCCCCcCHHHHHHHHHHHHCCchh
Confidence            999999999999999999999999999997664321          12222233 44599999999999999996 8999


Q ss_pred             CCeeecEEEeCCcccc
Q 023613          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      .|+|||+|.+|||++.
T Consensus       229 ~~itG~~i~vdGG~si  244 (244)
T d1edoa_         229 SYITGQAFTIDGGIAI  244 (244)
T ss_dssp             GGCCSCEEEESTTTTC
T ss_pred             cCCcCCeEEeCCCeeC
Confidence            9999999999999863

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=6.5e-55  Score=365.57  Aligned_cols=246  Identities=35%  Similarity=0.529  Sum_probs=219.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.  .+..++.||++++++++++++++.+++++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--ERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999999999999999888886  46778999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|+++ +|+||++||..+..+.++...|+++|+|
T Consensus        81 iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (253)
T d1hxha_          81 LNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCeEEecccccCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHH
Confidence            9999999999765  889999999999999999999999999999999754 5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCC--CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          175 VLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~~--~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +.+|+|++|.|+++  +|||||+|+||+++|++.....+.....+.     ... .....+.+|+.+|+|+|++++||+|
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~-----~~~-~~~~~~~gr~~~pedvA~~v~fL~S  231 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEM-----VLH-DPKLNRAGRAYMPERIAQLVLFLAS  231 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHH-----HBC-BTTTBTTCCEECHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHH-----HHh-CccccccCCCCCHHHHHHHHHHHhC
Confidence            99999999999987  469999999999999998766554322111     000 0112234899999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++|+|||.|.+|||++.
T Consensus       232 ~~s~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         232 DESSVMSGSELHADNSILG  250 (253)
T ss_dssp             GGGTTCCSCEEEESSSCTT
T ss_pred             hhhCCCcCcEEEECccHhh
Confidence            9999999999999999875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.2e-54  Score=366.74  Aligned_cols=259  Identities=29%  Similarity=0.369  Sum_probs=224.7

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++..    ..++.++.||++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999988888777642    24688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++|++|++|||||..........+.+.++|++.+++|+.+++.++|+++|.|.+++.++|+++||..+..+.+++..|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            99999999999998655335566778999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+.+|+|++|.|++++|||||+|+||+++|++.......+...+.... +.... ....|.+|+.+|+|||++++||
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~-~~~~~-~~~iPlgR~g~pediA~~v~fL  238 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYS-FIGSR-KECIPVGHCGKPEEIANIIVFL  238 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHH-HHHHC-TTTCTTSSCBCHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHH-HHHHH-HcCCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998766543332222111 11111 2234569999999999999999


Q ss_pred             cCC-CCCCeeecEEEeCCcccccccc
Q 023613          251 ASD-EARYISGTNLMVDGGFTSVNHS  275 (280)
Q Consensus       251 ~s~-~~~~~~G~~i~~dgG~~~~~~~  275 (280)
                      +|+ .++|+||++|.+|||+++..|.
T Consensus       239 ~S~d~s~~itG~~i~vDGG~~l~~g~  264 (274)
T d1xhla_         239 ADRNLSSYIIGQSIVADGGSTLVMGM  264 (274)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGGCCGG
T ss_pred             cCCccccCccCcEEEeCcCHHHhcCC
Confidence            996 5889999999999999987764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.1e-54  Score=366.61  Aligned_cols=260  Identities=26%  Similarity=0.357  Sum_probs=219.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC----CCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE----PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++...    .++.++.||++++++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999998888877432    4688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           91 KFGTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      ++|++|++|||||...+.  .....+.+.++|++.+++|+.+++.++++++|.|+++..+.|+++||.++..+.++...|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence            999999999999987641  123356788899999999999999999999999987654555555556778899999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|+|+.+|+|++|.||+++|||||+|+||+++|++.......+...+.. ........ ...|.+|+.+|+|+|++++
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~~~~~~-~~~PlgR~g~pediA~~v~  239 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKF-YNFMASHK-ECIPIGAAGKPEHIANIIL  239 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHH-HHHHHHCT-TTCTTSSCBCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHH-HHHHHHHh-cCCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999987665443322221 11112222 3345599999999999999


Q ss_pred             HhcCCC-CCCeeecEEEeCCccccccccc
Q 023613          249 FLASDE-ARYISGTNLMVDGGFTSVNHSL  276 (280)
Q Consensus       249 ~L~s~~-~~~~~G~~i~~dgG~~~~~~~~  276 (280)
                      ||+|++ +.|+|||+|.+|||+++..|+.
T Consensus       240 fL~S~~as~~iTG~~i~vDGG~~l~~g~~  268 (272)
T d1xkqa_         240 FLADRNLSFYILGQSIVADGGTSLVMGTQ  268 (272)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGCBGGG
T ss_pred             HHhCcchhCCccCeEEEeCcCHHHhcCCC
Confidence            999975 5799999999999999987664

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-54  Score=358.48  Aligned_cols=240  Identities=28%  Similarity=0.380  Sum_probs=213.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ...|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.   .+..+.+|++|+++++++++    ++
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~----~~   74 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP---GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCeEEEEeCCCHHHHHHHHH----Hh
Confidence            346899999999999999999999999999999999999999988887765   46788999999999876654    57


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcc-cCCCceEEEEccccccccCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMI-PQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|. +...|+||+++|..+..+.++...|+++
T Consensus        75 g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~as  152 (244)
T d1pr9a_          75 GPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             CCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCceEEEeccccccc--cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhh
Confidence            999999999999765  8999999999999999999999999999999754 4567999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+++|+|.+|.||+++|||||+|+||+++|++..........        ....... .|.+|+.+|+|||++++||+
T Consensus       153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~--------~~~~~~~-~pl~R~~~peevA~~v~fL~  223 (244)
T d1pr9a_         153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK--------AKTMLNR-IPLGKFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHH--------HHHHHTT-CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHH--------HHHHHhc-CCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999998766543321        1112223 34599999999999999999


Q ss_pred             CCCCCCeeecEEEeCCccc
Q 023613          252 SDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~~  270 (280)
                      |+.++|+|||+|.+|||++
T Consensus       224 S~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         224 SDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CchhCCcCCcEEEECccHh
Confidence            9999999999999999996

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-54  Score=367.32  Aligned_cols=253  Identities=26%  Similarity=0.372  Sum_probs=223.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC------CCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG------GEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.      ...++.++.||++++++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999988888777663      1357889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAY  168 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y  168 (280)
                      .+.+|++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++|+ .+..+.++...|
T Consensus        89 ~~~~G~iDiLVnnAg~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y  165 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHS  165 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHH
T ss_pred             HHHhCCeEEEEeecccccc--CchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccc
Confidence            9999999999999998765  8899999999999999999999999999999999998899999866 456678899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      +++|+|+.+|+|++|.|++++|||||+|+||+++|++...........      +.+...+. .+.+|+.+|+|||++++
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~------~~~~~~~~-~plgR~g~pedvA~~v~  238 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQS------FFEGSFQK-IPAKRIGVPEEVSSVVC  238 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGG------GGTTGGGG-STTSSCBCTHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHH------HHHHHHhc-CCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999999999987655432211      11111222 34599999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccccccccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTSVNHSLR  277 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~~~~~~~  277 (280)
                      ||+|+.+.|+|||+|.+|||++...+.++
T Consensus       239 fL~Sd~s~~iTG~~i~VDGG~sl~~~~~~  267 (297)
T d1yxma1         239 FLLSPAASFITGQSVDVDGGRSLYTHSYE  267 (297)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCBTTCC
T ss_pred             HHhCchhcCcCCcEEEeCcChhhhcCCCC
Confidence            99999999999999999999998877755

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-54  Score=358.33  Aligned_cols=240  Identities=28%  Similarity=0.394  Sum_probs=212.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.   .+.++.||+++++++++++    +++|
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~---~~~~~~~Dv~~~~~v~~~~----~~~g   73 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP---GIEPVCVDLGDWDATEKAL----GGIG   73 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHH----TTCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC---CCeEEEEeCCCHHHHHHHH----HHcC
Confidence            36899999999999999999999999999999999999998888877765   4678899999999987665    4679


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++|.+.|.|.++ ..|+||+++|..+..+.++...|+++|
T Consensus        74 ~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          74 PVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             CCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCeEEEECCccccc--hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence            99999999998765  899999999999999999999999999999986554 568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|+.+|+|++|.|++++|||||+|+||+++|++.......++        ........ .+.+|+.+|+|+|++++||+|
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~--------~~~~~~~~-~pl~R~~~peeva~~v~fL~S  222 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPE--------FARKLKER-HPLRKFAEVEDVVNSILFLLS  222 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHH--------HHHHHHHH-STTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHH--------HHHHHHhc-CCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999776544322        11222233 345999999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +.++|+|||+|.+|||++.
T Consensus       223 ~~s~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         223 DRSASTSGGGILVDAGYLA  241 (242)
T ss_dssp             GGGTTCCSSEEEESTTGGG
T ss_pred             chhcCcCCceEEeCcchhc
Confidence            9999999999999999875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.9e-54  Score=362.86  Aligned_cols=254  Identities=30%  Similarity=0.403  Sum_probs=203.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..    ..++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999998888777632    24688999999999999999999999


Q ss_pred             HcCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccc-cccccCCCCcc
Q 023613           91 KFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSV-AGAIGGLGPHA  167 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~-~~~~~~~~~~~  167 (280)
                      ++|++|++|||||+...  ....+.+.+.++|++.+++|+.+++.++++++|.|+++. |.+|+++|. ++..+.++...
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~  160 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY  160 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchh
Confidence            99999999999998643  114566779999999999999999999999999997664 566666555 46788999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+++|+|+++|+|+||.|++++|||||+|+||+++|++.......+........ ......+. .|.+|+.+|+|||+++
T Consensus       161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~-~Pl~R~g~pedvA~~v  238 (264)
T d1spxa_         161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYS-TMATMKEC-VPAGVMGQPQDIAEVI  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HH-HHHHHHHH-CTTSSCBCHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHH-HHHHHHhc-CCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999997765433222221111 12222233 4559999999999999


Q ss_pred             HHhcCC-CCCCeeecEEEeCCcccc
Q 023613          248 LFLASD-EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~-~~~~~~G~~i~~dgG~~~  271 (280)
                      +||+|+ .++|+||++|.+|||++.
T Consensus       239 ~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         239 AFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHhCCcccCCccCceEEeCCChhh
Confidence            999995 488999999999999986

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=8.5e-54  Score=360.65  Aligned_cols=248  Identities=28%  Similarity=0.408  Sum_probs=216.4

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .+.++|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..  ..++.++.||++++++++++++++
T Consensus         2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            466789999999999999999999999999999999999999888877666532  357889999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccc-------
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAI-------  160 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~-------  160 (280)
                      .+++|++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++.+.|+|.++ ..++|++++|.....       
T Consensus        82 ~~~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~  159 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  159 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHHhCCCcEeccccccccc--CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc
Confidence            9999999999999999765  889999999999999999999999999999998654 557778777766543       


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.++...|+++|+|+.+|+|.+|.|++++|||||+|+||+++|++.....+.          ..+..... .+.+|+.+|
T Consensus       160 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~----------~~~~~~~~-~pl~R~g~p  228 (260)
T d1h5qa_         160 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK----------IRDHQASN-IPLNRFAQP  228 (260)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH----------HHHHHHHT-CTTSSCBCG
T ss_pred             cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHH----------HHHHHHhc-CCCCCCcCH
Confidence            3356789999999999999999999999999999999999999997664321          22222333 345999999


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|||++++||+|++++|+||++|.+|||++.
T Consensus       229 edvA~~v~fL~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         229 EEMTGQAILLLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             GGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHHHHHhcchhCCCcCceEEECCCeec
Confidence            9999999999999999999999999999975

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=8.6e-54  Score=358.89  Aligned_cols=246  Identities=18%  Similarity=0.218  Sum_probs=215.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      |+|||||++|||+++|+.|+++|++|++++|+.+.++++.....     .+..+|++++++++++++++.+++|++|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-----~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-----TYPQLKPMSEQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-----HCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-----cEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            79999999999999999999999999999999887776654322     1346899999999999999999999999999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHHHHHH
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLN  179 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  179 (280)
                      ||||+.... .++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|+++|+|+.+|+
T Consensus        77 nNAg~~~~~-~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt  155 (252)
T d1zmta1          77 SNDIFAPEF-QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLA  155 (252)
T ss_dssp             EECCCCCCC-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCcCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHH
Confidence            999986432 7899999999999999999999999999999999988999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCee
Q 023613          180 KNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYIS  259 (280)
Q Consensus       180 ~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~  259 (280)
                      |++|.||+++|||||+|+||+++|++.....+.+.....  +.......+.. +.+|+.+|+|||++++||+|++++|+|
T Consensus       156 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~--~e~~~~~~~~~-pl~R~g~pedvA~~v~fL~S~~s~~iT  232 (252)
T d1zmta1         156 NALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN--PEHVAHVKKVT-ALQRLGTQKELGELVAFLASGSCDYLT  232 (252)
T ss_dssp             HHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC--HHHHHHHHHHS-SSSSCBCHHHHHHHHHHHHTTSCGGGT
T ss_pred             HHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCC--HHHHHHHHhcC-CCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            999999999999999999999999998776654332221  11223333444 459999999999999999999999999


Q ss_pred             ecEEEeCCccccccc
Q 023613          260 GTNLMVDGGFTSVNH  274 (280)
Q Consensus       260 G~~i~~dgG~~~~~~  274 (280)
                      ||+|.+|||+++...
T Consensus       233 G~~i~vdGG~~~~~~  247 (252)
T d1zmta1         233 GQVFWLAGGFPMIER  247 (252)
T ss_dssp             TCEEEESTTCCCCCC
T ss_pred             CCeEEECCCceeCCC
Confidence            999999999998654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=8.8e-53  Score=357.15  Aligned_cols=252  Identities=30%  Similarity=0.398  Sum_probs=212.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.  .++..+.+|++++++++++++++.+++++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG--DNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999999999999888877765  47888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCC---CCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           95 LDIMVNNAGISGAPC---PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        95 ~d~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +|++|||||+.....   ....+.+.++|++.+++|+.+++.++|+++|.|+++ +|++|+++|..+..+.++...|+++
T Consensus        80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~Y~as  158 (276)
T d1bdba_          80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAA  158 (276)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHHHHHH
T ss_pred             cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCchHHHH
Confidence            999999999865421   122444556799999999999999999999999765 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+|+.+|+|++|.|++++ ||||+|+||+++|++......................... .|++|+.+|+|+|++++||+
T Consensus       159 Kaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~PlgR~g~peeva~~v~fL~  236 (276)
T d1bdba_         159 KHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV-LPIGRMPEVEEYTGAYVFFA  236 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT-CTTSSCCCGGGGSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999975 9999999999999987544322211111112233333343 44599999999999999999


Q ss_pred             CC-CCCCeeecEEEeCCcccc
Q 023613          252 SD-EARYISGTNLMVDGGFTS  271 (280)
Q Consensus       252 s~-~~~~~~G~~i~~dgG~~~  271 (280)
                      |+ .+.|+||++|.+|||++.
T Consensus       237 S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         237 TRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             CHHHHTTCSSCEEEESSSGGG
T ss_pred             CCcccCCeeCcEEEECcChhh
Confidence            85 688999999999999875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-52  Score=352.54  Aligned_cols=251  Identities=22%  Similarity=0.238  Sum_probs=210.9

Q ss_pred             ccccccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           11 PAVQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++..+|+||++|||||+|  |||+++|++|+++|++|++++|+++..+...+.........++.+|++++++++++++.+
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHH
Confidence            456789999999999986  999999999999999999999997766555444443456778999999999999999999


Q ss_pred             HHHcCCccEEEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCc
Q 023613           89 VEKFGTLDIMVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPH  166 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~  166 (280)
                      .+.+|++|++|||||....  ...++.+.+.++|++.+++|+.+++.+++.+.|.|.+  +|+||+++|..+..+.++..
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~  158 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYN  158 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCch
Confidence            9999999999999998642  1146778899999999999999999999999999865  58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          167 AYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       167 ~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      .|+++|+|+++|+|++|.||+++|||||+|+||+++|++.......+.        ..+...+.. |.+|+.+|+|||++
T Consensus       159 ~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~--------~~~~~~~~~-pl~R~~~pedvA~~  229 (256)
T d1ulua_         159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTK--------MYDRVAQTA-PLRRNITQEEVGNL  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHH--------HHHHHHHHS-TTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHH--------HHHHHHhcC-CCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999998765433221        122223333 44999999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCccccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ++||+|+.++|+|||+|.+|||++.+
T Consensus       230 v~fL~S~~s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         230 GLFLLSPLASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHhCchhCCccCCeEEECcCEeCc
Confidence            99999999999999999999999875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2.6e-52  Score=347.37  Aligned_cols=239  Identities=29%  Similarity=0.483  Sum_probs=207.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..++++  .++.+++||++++++++++++++.+.+|+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4899999999999999999999999999999999999999888877765  57888999999999999999999999999


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|.+  .+.++++|| .+..+.+++..|+++|+|
T Consensus        80 iDiLinnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss-~a~~~~~~~~~Y~~sK~a  154 (241)
T d2a4ka1          80 LHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGS-VAGLGAFGLAHYAAGKLG  154 (241)
T ss_dssp             CCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECC-CTTCCHHHHHHHHHCSSH
T ss_pred             ccEeccccccccc--cchhhhhcccccccccccccccccccccccccccc--ccceeeccc-cccccccCccccchhhHH
Confidence            9999999998765  88999999999999999999999999999999865  345555555 455566888999999999


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCC
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      +++|++.||+|++++|||||+|+||+++|++.....+..         ...+ .+. .+.+|+.+|+|||++++||+|+.
T Consensus       155 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~---------~~~~-~~~-~p~~r~~~p~dva~~v~fL~S~~  223 (241)
T d2a4ka1         155 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWA---------WEQE-VGA-SPLGRAGRPEEVAQAALFLLSEE  223 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHH---------HHHH-HHT-STTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhH---------HHHH-HhC-CCCCCCcCHHHHHHHHHHHhcch
Confidence            999999999999999999999999999999876533211         1222 223 45599999999999999999999


Q ss_pred             CCCeeecEEEeCCcccc
Q 023613          255 ARYISGTNLMVDGGFTS  271 (280)
Q Consensus       255 ~~~~~G~~i~~dgG~~~  271 (280)
                      ++|+||+++.+|||++.
T Consensus       224 s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         224 SAYITGQALYVDGGRSI  240 (241)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hCCCcCceEEeCCCccc
Confidence            99999999999999875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.1e-52  Score=343.92  Aligned_cols=230  Identities=26%  Similarity=0.388  Sum_probs=204.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.+++.        ...++.||+++.      ++.+.++++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~--------~~~~~~~Dv~~~------~~~~~~~~g~i   67 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS--------GHRYVVCDLRKD------LDLLFEKVKEV   67 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT--------CSEEEECCTTTC------HHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc--------CCcEEEcchHHH------HHHHHHHhCCC
Confidence            7899999999999999999999999999999999998765432        234678999864      45566788999


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |++|||||....  .++.+.+.++|++.+++|+.+++.++|+++|.|++++.|+||+++|..+..+.++...|+++|+|+
T Consensus        68 D~lVnnAG~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal  145 (234)
T d1o5ia_          68 DILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL  145 (234)
T ss_dssp             SEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             cEEEecccccCC--cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence            999999998765  889999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          176 LGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      .+|+|.+|.|++++|||||+|+||+++|++.....+...         .....+. .+.+|+.+|+|+|++++||+|+.+
T Consensus       146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~---------~~~~~~~-~pl~R~~~pediA~~v~fL~S~~s  215 (234)
T d1o5ia_         146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEK---------KKQVESQ-IPMRRMAKPEEIASVVAFLCSEKA  215 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHH---------HHHHHTT-STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHH---------HHHHHhc-CCCCCCcCHHHHHHHHHHHhChhh
Confidence            999999999999999999999999999999776554321         1222333 445999999999999999999999


Q ss_pred             CCeeecEEEeCCcccc
Q 023613          256 RYISGTNLMVDGGFTS  271 (280)
Q Consensus       256 ~~~~G~~i~~dgG~~~  271 (280)
                      +|+|||+|.+|||++.
T Consensus       216 ~~itG~~i~vDGG~s~  231 (234)
T d1o5ia_         216 SYLTGQTIVVDGGLSK  231 (234)
T ss_dssp             TTCCSCEEEESTTCCC
T ss_pred             cCCcCcEEEECccccc
Confidence            9999999999999976

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=5.8e-51  Score=345.60  Aligned_cols=256  Identities=25%  Similarity=0.381  Sum_probs=215.2

Q ss_pred             cccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           12 AVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      ...+|+||++|||||++|||+++|+.|+++|++|++++|+ ++.++++.+++.. ..++.++.+|+++++++.++++++.
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            3456999999999999999999999999999999999887 4556666666543 3578899999999999999999999


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccc
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAY  168 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~~~Y  168 (280)
                      +.++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++++.|+|.+  +|++++++|..+.. +.++...|
T Consensus        92 ~~~g~idilV~nag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y  167 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVY  167 (272)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHH
T ss_pred             HHhCCCCccccccccchh--hhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhH
Confidence            999999999999998766  88999999999999999999999999999999965  47888888877654 56677889


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhh--hhhHHHHHhhhccCCCCCCCHHHHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA--MVGFRNFVARNANMQGTELTANDVANA  246 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~  246 (280)
                      +++|+|+++|+|.+|.||+++|||||+|+||+++|++..............  .............+.+|+.+|+|||++
T Consensus       168 ~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~  247 (272)
T d1g0oa_         168 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV  247 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHH
Confidence            999999999999999999999999999999999999876543221110000  011112222334455999999999999


Q ss_pred             HHHhcCCCCCCeeecEEEeCCcccc
Q 023613          247 VLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       247 ~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++||+|+.+.|+||++|.+|||+++
T Consensus       248 v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         248 VCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHhCchhcCccCceEeECCCCCC
Confidence            9999999999999999999999864

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.2e-51  Score=345.75  Aligned_cols=251  Identities=27%  Similarity=0.362  Sum_probs=212.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec-CcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV-QDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .|.||++|||||++|||+++|+.|+++|++|+++++ +++.+++..+++.. ..++.++.||++++++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            489999999999999999999999999999998755 55556666666643 3578899999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-cCCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~~~~~~~Y~~s  171 (280)
                      +++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|++  ++++++++|..+.. +.+++..|+++
T Consensus        83 g~idilinnag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~~~~~~~~Y~as  158 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAGS  158 (259)
T ss_dssp             SCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred             CCCcEEEeccccccc--cccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCcccccccccccccCCCCchhHHHH
Confidence            999999999999765  88999999999999999999999999999999965  46787777766655 67899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh---hhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER---TEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      |+|+.+|+|.||.|++++|||||+|+||+++|++.+........   .....+.+.+...... +.+|+.+|+|||++++
T Consensus       159 K~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pl~R~g~p~eVa~~v~  237 (259)
T d1ja9a_         159 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN-PLKRIGYPADIGRAVS  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS-TTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCC-CCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999997653322110   0000112333334444 4499999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCccc
Q 023613          249 FLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ||+|+.++++||++|.+|||..
T Consensus       238 fL~S~~a~~itG~~i~vDGG~~  259 (259)
T d1ja9a_         238 ALCQEESEWINGQVIKLTGGGI  259 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHhCchhcCCcCceEEeCCCCC
Confidence            9999999999999999999973

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.1e-50  Score=337.09  Aligned_cols=229  Identities=24%  Similarity=0.260  Sum_probs=209.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCe-------EEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAK-------VCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~-------V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +++|||||++|||+++|++|+++|++       |++++|+.+.++++.+++... .++.++.||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999998       899999999999888887653 5788899999999999999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++|++|++|||||+...  .++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.+++..|++
T Consensus        82 ~~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCcceeecccccccC--CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHH
Confidence            99999999999999866  8999999999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+.+|+++++.|++++|||||+|+||+++|+|+........                    .++.+|+|+|+++++|
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~--------------------~~~~~PedvA~~v~~l  219 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQ--------------------ALMMMPEDIAAPVVQA  219 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTG--------------------GGSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhH--------------------hcCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999766432210                    3567899999999999


Q ss_pred             cCCCCCCeeecE-EEeCCcc
Q 023613          251 ASDEARYISGTN-LMVDGGF  269 (280)
Q Consensus       251 ~s~~~~~~~G~~-i~~dgG~  269 (280)
                      +++..++++|+. +..+||-
T Consensus       220 ~s~~~~~~~~~~~i~p~~G~  239 (240)
T d2bd0a1         220 YLQPSRTVVEEIILRPTSGD  239 (240)
T ss_dssp             HTSCTTEEEEEEEEEETTCC
T ss_pred             HcCCccCccCCEEEEecCCC
Confidence            999888888874 5577763

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-51  Score=341.97  Aligned_cols=241  Identities=29%  Similarity=0.446  Sum_probs=208.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++..   ..++.++.||++++++++++++++.+.+|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            599999999999999999999999999999999999999888887754   24788899999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCccchh
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++|++|||||+...          ++|++.+++|+.+++.+++.++|+|.++.   .|+||++||..+..+.++...|++
T Consensus        82 ~iDilVnnAg~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  151 (254)
T d2gdza1          82 RLDILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  151 (254)
T ss_dssp             CCCEEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CcCeeccccccccc----------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence            99999999998643          45899999999999999999999998764   478999999999999999999999


Q ss_pred             hHHHHHHHHHH--HHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          171 SKHAVLGLNKN--VAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       171 sK~al~~~~~~--la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      ||+|+.+|+|+  |+.|++++|||||+|+||+++|+|.............  ..+........+ .+|+.+|+|||++++
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~--~~~~~~~~~~~p-~~r~~~pedvA~~v~  228 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQY--IEYKDHIKDMIK-YYGILDPPLIANGLI  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGG--GGGHHHHHHHHH-HHCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcccccccccc--HHHHHHHHhcCC-CCCCcCHHHHHHHHH
Confidence            99999999996  7889999999999999999999998765443221111  112222233333 388999999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCccccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ||+|++  ++||+++.+|||+...
T Consensus       229 fL~s~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         229 TLIEDD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             HHHHCT--TCSSCEEEEETTTEEE
T ss_pred             HHHcCC--CCCCCEEEECCCCeee
Confidence            999864  5999999999998764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-50  Score=337.05  Aligned_cols=246  Identities=27%  Similarity=0.367  Sum_probs=211.8

Q ss_pred             CccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHH
Q 023613           10 SPAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        10 ~~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      +|.|.+|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++.   ..++.++.||++++++++++++
T Consensus         2 ~~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~   81 (257)
T d1xg5a_           2 RPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS   81 (257)
T ss_dssp             CTTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHH
Confidence            3556679999999999999999999999999999999999999998888877753   3578889999999999999999


Q ss_pred             HHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--CceEEEEccccccccC--
Q 023613           87 LTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAIGG--  162 (280)
Q Consensus        87 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~--  162 (280)
                      .+.++++++|++|||||....  .++.+.+.++|++.+++|+.++++++++++|.|.+.+  .|+||++||.++....  
T Consensus        82 ~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~  159 (257)
T d1xg5a_          82 AIRSQHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL  159 (257)
T ss_dssp             HHHHHHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC
T ss_pred             HHHHhcCCCCEEEecccccCC--CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC
Confidence            999999999999999998865  8999999999999999999999999999999987654  6899999999987544  


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHH--CCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          163 LGPHAYTGSKHAVLGLNKNVAAEL--GKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       163 ~~~~~Y~~sK~al~~~~~~la~e~--~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      ++...|+++|+|+.+|+|+|+.|+  +++||+||+|+||+++|++.....+...          ...... .+.+++.+|
T Consensus       160 ~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~----------~~~~~~-~~~~r~~~p  228 (257)
T d1xg5a_         160 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP----------EKAAAT-YEQMKCLKP  228 (257)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH----------HHHHHH-HC---CBCH
T ss_pred             cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhH----------HHHHhc-CCCCCCcCH
Confidence            456679999999999999999998  7899999999999999999766543221          111222 234899999


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          241 NDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      +|||++++||+|+.+.++|||++..++|
T Consensus       229 edvA~~v~fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         229 EDVAEAVIYVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             HHHHHHHHHHhCChhcCeECCEEEEeCC
Confidence            9999999999999999999997665554

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-51  Score=339.42  Aligned_cols=243  Identities=30%  Similarity=0.471  Sum_probs=207.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+    ...+....+|+.+.+.++    ...+.++
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----~~~~~~~~~d~~~~~~~~----~~~~~~~   73 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----YPGIQTRVLDVTKKKQID----QFANEVE   73 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----STTEEEEECCTTCHHHHH----HHHHHCS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----ccCCceeeeecccccccc----ccccccc
Confidence            35999999999999999999999999999999999999887665443    245677888998876654    4455668


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc-ccCCCCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA-IGGLGPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK  172 (280)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.|.|.+++.|+||+++|..+. .+.++...|+++|
T Consensus        74 ~id~lVn~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          74 RLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (245)
T ss_dssp             CCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             cceeEEecccccCC--CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHH
Confidence            99999999999866  88999999999999999999999999999999999999999999998775 5778889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +|+++|+|++|.||+++|||||+|+||+++|++...........    .......... .+.+|+.+|+|+|++++||++
T Consensus       152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~----~~~~~~~~~~-~pl~R~~~pedva~~v~fL~s  226 (245)
T d2ag5a1         152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNP----EEARNDFLKR-QKTGRFATAEEIAMLCVYLAS  226 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSH----HHHHHHHHHT-CTTSSCEEHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhh----HHHHHHHHhc-CCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999976543222111    1122223333 345999999999999999999


Q ss_pred             CCCCCeeecEEEeCCcccc
Q 023613          253 DEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++.++||+.|.+|||++.
T Consensus       227 ~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         227 DESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             GGGTTCCSCEEEECTTGGG
T ss_pred             hhhCCCcCceEEeCCCcCC
Confidence            9999999999999999974

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-50  Score=347.38  Aligned_cols=232  Identities=26%  Similarity=0.389  Sum_probs=204.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---------chHHHHHHHhCCCCCeEEEecCCCCHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---------NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSA   84 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   84 (280)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.         +.+++..+++..  ......+|+.+.++++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR--RGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH--TTCEEEEECCCGGGHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh--cccccccccchHHHHHHH
Confidence            458999999999999999999999999999999987653         345555555543  334567899999999999


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023613           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  164 (280)
                      ++++.+++|++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~  158 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  158 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHcCCCCEEEECCccCCC--CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC
Confidence            99999999999999999999876  8999999999999999999999999999999999988999999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      ...|+++|+|+.+|+++++.|++++|||||+|+||++.|++.... +.+         .           .+..+|+|||
T Consensus       159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~-~~~---------~-----------~~~~~PedvA  217 (302)
T d1gz6a_         159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM-PED---------L-----------VEALKPEYVA  217 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS-CHH---------H-----------HHHSCGGGTH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC-cHh---------h-----------HhcCCHHHHH
Confidence            999999999999999999999999999999999999988764432 211         1           2345799999


Q ss_pred             HHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          245 NAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ++++||+|+.+ ++||++|.+|||+..
T Consensus       218 ~~v~fL~S~~a-~itG~~i~vdGG~~~  243 (302)
T d1gz6a_         218 PLVLWLCHESC-EENGGLFEVGAGWIG  243 (302)
T ss_dssp             HHHHHHTSTTC-CCCSCEEEEETTEEE
T ss_pred             HHHHHHcCCCc-CCCCcEEEeCCCcee
Confidence            99999999765 789999999999864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=2.7e-48  Score=332.77  Aligned_cols=248  Identities=25%  Similarity=0.358  Sum_probs=212.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..  ..++.++.||++++++++++++.+.+.
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            479999999999999999999999999999999999999888877766632  357888999999999999999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEccccccccCCCCccchh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ++++|++|||||....  .++...+.++|++.+.+|+...+.+.+...+.+... ..+.+++++|..+..+.++...|++
T Consensus       101 ~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysa  178 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  178 (294)
T ss_dssp             TCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             ccccchhhhhhhhccc--cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHH
Confidence            9999999999998765  788999999999999999999999988877766544 4678889999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+.+|+|.+|.|++++|||||+|+||+++|++..........       ......+. .+.+|+.+|+|+|++++||
T Consensus       179 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~-------~~~~~~~~-~pl~R~~~pediA~~v~fL  250 (294)
T d1w6ua_         179 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT-------FEKEMIGR-IPCGRLGTVEELANLAAFL  250 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH-------HHHHHHTT-CTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHH-------HHHHHhhc-CCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998765543221       11222233 3459999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+.++|+||++|.+|||++.
T Consensus       251 ~sd~s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         251 CSDYASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             TSGGGTTCCSCEEEESTTHHH
T ss_pred             hCchhcCCCCcEEEECCChhh
Confidence            999999999999999999763

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-46  Score=316.87  Aligned_cols=243  Identities=18%  Similarity=0.211  Sum_probs=205.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHH---cCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHK---HGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~---~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      ..|+||++|||||++|||+++|++|++   +|++|++++|+++.++++.+++.   ...++.++.||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            368999999999999999999999997   69999999999999998887764   235788999999999999999999


Q ss_pred             HHHH----cCCccEEEECCCCCCC-CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC--CceEEEEccccccc
Q 023613           88 TVEK----FGTLDIMVNNAGISGA-PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT--KGTIISICSVAGAI  160 (280)
Q Consensus        88 ~~~~----~~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~  160 (280)
                      +.+.    ++.+|++|||||...+ +..++.+.+.++|++.+++|+.+++.++++++|+|++++  .|+||++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8773    3578999999998653 225688999999999999999999999999999998875  58999999999999


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCH
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTA  240 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
                      +.+++..|++||+|+++|+++|+.|  .+|||||+|+||+++|+|........... .    ....+.... +.+++.+|
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~-~----~~~~~~~~~-~~~r~~~p  233 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDP-E----LRSKLQKLK-SDGALVDC  233 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCH-H----HHHHHHHHH-HTTCSBCH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCH-H----HHHHHHhcC-CCCCCCCH
Confidence            9999999999999999999999999  57999999999999999876432211110 0    111112222 23899999


Q ss_pred             HHHHHHHHHhcCCCCCCeeecEEEe
Q 023613          241 NDVANAVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       241 ~dva~~~~~L~s~~~~~~~G~~i~~  265 (280)
                      +|+|+.+++|+++ .+++||+.|++
T Consensus       234 ~evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         234 GTSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             HHHHHHHHHHhhh-ccCCCCCeEEe
Confidence            9999999999986 46999999975

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-46  Score=310.89  Aligned_cols=237  Identities=31%  Similarity=0.473  Sum_probs=204.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.  .......+|+.+.++++.....+...++.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--NNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CCccccccccccccccccccccccccccc
Confidence            5899999999999999999999999999999999999999999888886  46778899999999999999999999999


Q ss_pred             ccEEEECCCCCCCC----CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC------CCceEEEEccccccccCCC
Q 023613           95 LDIMVNNAGISGAP----CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ------TKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        95 ~d~li~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~~  164 (280)
                      +|.+++|+++....    ..++.+.+.++|++.+++|+.+++++++++.|+|...      +.|+||++||..+..+.++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~  159 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG  159 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCC
Confidence            99999998875431    1456778899999999999999999999999987543      5689999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHH
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVA  244 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  244 (280)
                      +..|+++|+|+++|+|.++.|++++|||||+|+||+++|++.....+.          +.....+..++.+|+.+|+|||
T Consensus       160 ~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~----------~~~~~~~~~pl~~R~g~peevA  229 (248)
T d2o23a1         160 QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK----------VCNFLASQVPFPSRLGDPAEYA  229 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------------CHHHHTCSSSCSCBCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH----------HHHHHHhcCCCCCCCcCHHHHH
Confidence            999999999999999999999999999999999999999997654321          2223344455569999999999


Q ss_pred             HHHHHhcCCCCCCeeecEEEe
Q 023613          245 NAVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       245 ~~~~~L~s~~~~~~~G~~i~~  265 (280)
                      ++++||++  ++|+|||+|.+
T Consensus       230 ~~v~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         230 HLVQAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHH--CTTCCSCEEEE
T ss_pred             HHHHHHHh--CCCCCceEeEC
Confidence            99999996  57999999975

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-47  Score=315.19  Aligned_cols=219  Identities=27%  Similarity=0.409  Sum_probs=197.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++.. ..++.++.||++|+++++++++++.+.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            358999999999999999999999999999999999999999988887754 3578999999999999999999999999


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      |++|++|||||....  ..+.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||..+..+.++++.|++||
T Consensus        83 g~idilinnag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  160 (244)
T d1yb1a_          83 GDVSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  160 (244)
T ss_dssp             CCCSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCceeEeecccccc--ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence            999999999999876  788899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCC---CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          173 HAVLGLNKNVAAELGK---YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       173 ~al~~~~~~la~e~~~---~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      +|+.+|+++|+.|+++   +||+|++|+||+|+|++.+....             .        .++..+|+++|+.++.
T Consensus       161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~-------------~--------~~~~~~pe~va~~i~~  219 (244)
T d1yb1a_         161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST-------------S--------LGPTLEPEEVVNRLMH  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH-------------H--------HCCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc-------------c--------ccCCCCHHHHHHHHHH
Confidence            9999999999999876   58999999999999998654211             0        0567799999999988


Q ss_pred             hcCCCC
Q 023613          250 LASDEA  255 (280)
Q Consensus       250 L~s~~~  255 (280)
                      .+..+.
T Consensus       220 ~~~~~~  225 (244)
T d1yb1a_         220 GILTEQ  225 (244)
T ss_dssp             HHHTTC
T ss_pred             HHhcCC
Confidence            765443

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.9e-46  Score=314.11  Aligned_cols=236  Identities=19%  Similarity=0.206  Sum_probs=198.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH--hCCCCCeEEEecCCC-CHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS--LGGEPDTFFCHCDVT-KEEDVCSAVDLTVE   90 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~   90 (280)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+..+.+.+.  .....++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999998887666555432  234467889999998 67889999999999


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCC---CceEEEEccccccccCCCCcc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQT---KGTIISICSVAGAIGGLGPHA  167 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~~~  167 (280)
                      +++++|+||||||..          +.++|++++++|+.+++.++++++|.|.+++   .|+||+++|..+..+.+++..
T Consensus        81 ~~g~iDilvnnAG~~----------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~  150 (254)
T d1sbya1          81 QLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHSCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             HcCCCCEEEeCCCCC----------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHH
Confidence            999999999999964          3467999999999999999999999997753   589999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHH
Q 023613          168 YTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAV  247 (280)
Q Consensus       168 Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  247 (280)
                      |+++|+|+.+|+++++.|++++|||||+|+||+|+|++.+......... .   .+..     ..+..+..+||++|+++
T Consensus       151 Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~-~---~~~~-----~~~~~~~~~~e~va~~~  221 (254)
T d1sbya1         151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVE-P---RVAE-----LLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSC-T---THHH-----HHTTSCCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHH-H---HHHh-----ccccCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999876543322111 0   0111     12224567899999999


Q ss_pred             HHhcCCCCCCeeecEEEeCCcccc
Q 023613          248 LFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       248 ~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +++.+.   +.||+++.+|||.+.
T Consensus       222 ~~~~~~---~~tG~vi~vdgG~l~  242 (254)
T d1sbya1         222 VKAIEA---NKNGAIWKLDLGTLE  242 (254)
T ss_dssp             HHHHHH---CCTTCEEEEETTEEE
T ss_pred             HHhhhC---CCCCCEEEECCCEeC
Confidence            988854   359999999999754

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.8e-45  Score=308.25  Aligned_cols=247  Identities=20%  Similarity=0.246  Sum_probs=210.7

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      -|+||++|||||++  |||+++|+.|+++|++|++++|+++..+...+.........++.+|+++..++...++.+.+.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            37899999999998  8999999999999999999999977666655544444566788899999999999999999999


Q ss_pred             CCccEEEECCCCCCCCC---CCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           93 GTLDIMVNNAGISGAPC---PDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      +++|++|||++......   ........+.|...+.+|+.+.+.+.+.+.+.+.+  ++.|+++||..+..+.|....|+
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y~  159 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMG  159 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHH
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHHH
Confidence            99999999999864311   22345677789999999999999999999999854  57899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|+|+++|+|.+|.||+++|||||+|+||+++|++.........        ........ .+.+|+++|||+|++++|
T Consensus       160 ~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~--------~~~~~~~~-~pl~R~~~peeia~~v~f  230 (258)
T d1qsga_         160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRK--------MLAHCEAV-TPIRRTVTIEDVGNSAAF  230 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHH--------HHHHHHHH-STTSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhh--------HHHHHHhC-CCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999766433221        11222233 345999999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCccccc
Q 023613          250 LASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      |+|+.++++||+++.+|||++..
T Consensus       231 L~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         231 LCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             HTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhCchhcCccCceEEECcCHHHh
Confidence            99999999999999999998765

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7.4e-45  Score=315.76  Aligned_cols=251  Identities=18%  Similarity=0.227  Sum_probs=199.5

Q ss_pred             CcEEEEEc--CCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-------------CCeEEEe----------
Q 023613           18 GRVALITG--GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-------------PDTFFCH----------   72 (280)
Q Consensus        18 ~k~vlItG--a~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~----------   72 (280)
                      +|++||||  +++|||+++|+.|+++|++|++++++..............             .......          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            79999999  5589999999999999999999998876554433322110             1111222          


Q ss_pred             ----------cCCCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhc
Q 023613           73 ----------CDVTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIM  142 (280)
Q Consensus        73 ----------~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  142 (280)
                                +|+++.++++++++.+.+.+|++|++|||+|......+++.+.+.++|++.+++|+++.+.++|+++|+|
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                      3666888899999999999999999999999875433678899999999999999999999999999999


Q ss_pred             ccCCCceEEEEccccccccCCC-CccchhhHHHHHHHHHHHHHHHCC-CCeEEEEEeCCeeeccccccCCC---------
Q 023613          143 IPQTKGTIISICSVAGAIGGLG-PHAYTGSKHAVLGLNKNVAAELGK-YGIRVNCVSPYAVATGLALAHLP---------  211 (280)
Q Consensus       143 ~~~~~~~iv~isS~~~~~~~~~-~~~Y~~sK~al~~~~~~la~e~~~-~gi~v~~v~pg~v~T~~~~~~~~---------  211 (280)
                      .+  +|+||++||..+..+.|+ ...|+++|+|+++|+|.||.||++ +|||||+|+||+++|+.......         
T Consensus       162 ~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~  239 (329)
T d1uh5a_         162 KP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNT  239 (329)
T ss_dssp             EE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC----------
T ss_pred             cc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhh
Confidence            54  589999999999998887 467999999999999999999986 69999999999999954332110         


Q ss_pred             --------------------------chhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEe
Q 023613          212 --------------------------EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMV  265 (280)
Q Consensus       212 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~  265 (280)
                                                .................+..+ ++|+.+|+|||++++||+|+.++|+|||+|.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-l~R~~~pedvA~~v~fLaSd~s~~iTGq~i~V  318 (329)
T d1uh5a_         240 NQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAP-LRQKLLSTDIGSVASFLLSRESRAITGQTIYV  318 (329)
T ss_dssp             --------------------------------CHHHHHHHHHHHHSS-SCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCC-CCCCcCHHHHHHHHHHHhCchhCCccCCeEEE
Confidence                                      000111111223333344444 49999999999999999999999999999999


Q ss_pred             CCcccc
Q 023613          266 DGGFTS  271 (280)
Q Consensus       266 dgG~~~  271 (280)
                      |||+..
T Consensus       319 DGG~~~  324 (329)
T d1uh5a_         319 DNGLNI  324 (329)
T ss_dssp             STTGGG
T ss_pred             CCCccc
Confidence            999854

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.8e-44  Score=304.10  Aligned_cols=240  Identities=27%  Similarity=0.323  Sum_probs=190.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC-cchHHHHHHHhCC--CCC-----------------eEEEecCCCCH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQ-DNLGQQVCQSLGG--EPD-----------------TFFCHCDVTKE   78 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~-~~~~~~~~~~~~~--~~~-----------------~~~~~~D~~~~   78 (280)
                      .++|||||++|||+++|+.|+++|++|++++++ ++..+++.+++..  ...                 .....+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            479999999999999999999999999998775 4445555554421  122                 33456779999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHH--------------HHhhhhhHhHHHHHHHHHHhc--
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFE--------------KVFDINVKGVFHGMKHAARIM--  142 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~l--  142 (280)
                      ++++++++++.+++|++|+||||||...+  .++.+.+.++|+              ..+.+|+.+++.+.+.+.+.+  
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCC--CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            99999999999999999999999999765  666666655554              578999999999999988753  


Q ss_pred             ----ccCCCceEEEEccccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhh
Q 023613          143 ----IPQTKGTIISICSVAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTED  218 (280)
Q Consensus       143 ----~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~  218 (280)
                          .+...++|++++|.....+.+++..|+++|+|+.+|+|.+|.||+++|||||+|+||++.+...   .+.+     
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~---~~~~-----  232 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD---MPPA-----  232 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG---SCHH-----
T ss_pred             hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc---CCHH-----
Confidence                3345689999999999999999999999999999999999999999999999999998654321   1111     


Q ss_pred             hhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          219 AMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                          .........++.+|+.+|+|+|++++||+|+++.|+||++|.+|||++.+
T Consensus       233 ----~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         233 ----VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             ----HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ----HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence                22223344555699999999999999999999999999999999999875

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-45  Score=308.96  Aligned_cols=242  Identities=21%  Similarity=0.253  Sum_probs=190.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEE---EecCcchH---HHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCI---ADVQDNLG---QQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~---~~r~~~~~---~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|++|||||++|||+++|+.|+++|++|+.   +.|+.+..   .+..+.+.. ..++..+.||+++++++.++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            689999999999999999999999998554   45554433   334444443 46899999999999999999988754


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                        +.+|++|||+|....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus        82 --g~idilvnnag~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             --SCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cchhhhhhccccccc--ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHH
Confidence              799999999999866  8899999999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhh-----hhhHHHHHh-hhccCCCCCCCHHHHH
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDA-----MVGFRNFVA-RNANMQGTELTANDVA  244 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~dva  244 (280)
                      ||+|+.+|+++|+.|++++||+||+|+||+++|++........+...+.     ...+..... ....+.++..+|+|||
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA  237 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHH
Confidence            9999999999999999999999999999999999987765433221110     011111111 1111225678999999


Q ss_pred             HHHHHhcCCC---CCCeeecEE
Q 023613          245 NAVLFLASDE---ARYISGTNL  263 (280)
Q Consensus       245 ~~~~~L~s~~---~~~~~G~~i  263 (280)
                      +++++++...   .+|++|+.+
T Consensus       238 ~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         238 EVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHhCCCCCeEEecHHHH
Confidence            9999999543   457777643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.1e-43  Score=293.60  Aligned_cols=230  Identities=29%  Similarity=0.396  Sum_probs=195.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++|||||++|||+++|++|+++|++|++++|+++.           .+...+.+|+++......+.....+.. ..+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~   68 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------EDLIYVEGDVTREEDVRRAVARAQEEA-PLFA   68 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------ccceEeeccccchhhhHHHHHhhhccc-cccc
Confidence            6999999999999999999999999999999998753           356678899999999999888887664 4555


Q ss_pred             EEECCCCCCC--CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHh------cccCCCceEEEEccccccccCCCCccch
Q 023613           98 MVNNAGISGA--PCPDIREADLSEFEKVFDINVKGVFHGMKHAARI------MIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        98 li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      ++++++....  ........+.+.|++.+++|+.+.+.+++.+.+.      |.+++.|+||++||..+..+.++...|+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~  148 (241)
T d1uaya_          69 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA  148 (241)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHH
T ss_pred             hhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhH
Confidence            6666655332  1145566788999999999999999999999998      5556679999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHH
Q 023613          170 GSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLF  249 (280)
Q Consensus       170 ~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  249 (280)
                      ++|+|+.+|+|++|.|++++|||||+|+||+++|++........          ........++.+|+.+|+|||++++|
T Consensus       149 asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~----------~~~~~~~~~~~~R~g~pedvA~~v~f  218 (241)
T d1uaya_         149 ASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA----------KASLAAQVPFPPRLGRPEEYAALVLH  218 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH----------HHHHHTTCCSSCSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhH----------HHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999987654321          11223344556999999999999999


Q ss_pred             hcCCCCCCeeecEEEeCCcccc
Q 023613          250 LASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      |+|  ++|+|||+|.+|||+++
T Consensus       219 L~s--~~~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         219 ILE--NPMLNGEVVRLDGALRM  238 (241)
T ss_dssp             HHH--CTTCCSCEEEESTTCCC
T ss_pred             HHh--CCCCCCCEEEECCcccC
Confidence            998  46999999999999876

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.4e-43  Score=303.64  Aligned_cols=252  Identities=24%  Similarity=0.230  Sum_probs=198.7

Q ss_pred             cccccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC------------CCC-eEEEecC--
Q 023613           12 AVQRLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG------------EPD-TFFCHCD--   74 (280)
Q Consensus        12 ~~~~l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~------------~~~-~~~~~~D--   74 (280)
                      |..+|+||++|||||++  |||+++|+.|+++|++|++++|+.............            ... .....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            45689999999999875  999999999999999999999976543332222110            011 1122232  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHH
Q 023613           75 ------------------VTKEEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMK  136 (280)
Q Consensus        75 ------------------~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  136 (280)
                                        .++..+++++++.+.+++|++|++|||||.......++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              24555678899999999999999999999865433678999999999999999999999999


Q ss_pred             HHHHhcccCCCceEEEEccccccc-cCCCCccchhhHHHHHHHHHHHHHHHC-CCCeEEEEEeCCeeeccccccCCCchh
Q 023613          137 HAARIMIPQTKGTIISICSVAGAI-GGLGPHAYTGSKHAVLGLNKNVAAELG-KYGIRVNCVSPYAVATGLALAHLPEEE  214 (280)
Q Consensus       137 ~~~~~l~~~~~~~iv~isS~~~~~-~~~~~~~Y~~sK~al~~~~~~la~e~~-~~gi~v~~v~pg~v~T~~~~~~~~~~~  214 (280)
                      ++++.+.+.  ++++.+++..... ..+....|+++|+++..+++.++.|++ ++|||||+|+||+++|++.......+ 
T Consensus       162 ~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~-  238 (297)
T d1d7oa_         162 HFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID-  238 (297)
T ss_dssp             HHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH-
T ss_pred             HHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCH-
Confidence            999988654  5666666655443 456778999999999999999999996 57999999999999999976543221 


Q ss_pred             hhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccccc
Q 023613          215 RTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVNH  274 (280)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~  274 (280)
                             .+.+...+.. |.+|+.+|+|||++++||+|+.++|+|||+|.+|||++.++=
T Consensus       239 -------~~~~~~~~~~-PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~  290 (297)
T d1d7oa_         239 -------TMIEYSYNNA-PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGV  290 (297)
T ss_dssp             -------HHHHHHHHHS-SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             -------HHHHHHHhCC-CCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCC
Confidence                   1223333444 459999999999999999999999999999999999876543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2.6e-43  Score=294.48  Aligned_cols=225  Identities=19%  Similarity=0.169  Sum_probs=187.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHH---HcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH--Hc
Q 023613           18 GRVALITGGATGIGESTVRLFH---KHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE--KF   92 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~---~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~   92 (280)
                      -|+||||||++|||+++|++|+   ++|++|++++|+++.++++.+......++.++.||++|+++++++++.+.+  .+
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            3899999999999999999997   479999999999998887765554456899999999999999999999865  56


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-----------CCceEEEEccccccc-
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----------TKGTIISICSVAGAI-  160 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~iv~isS~~~~~-  160 (280)
                      +++|++|||||+.... ..+.+.+.++|++.+++|+.+++.++++++|+|++.           ..|++|+++|..+.. 
T Consensus        82 ~~iDiLvnNAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          82 QGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             CCcceEEeeccccccC-cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence            8999999999987542 568899999999999999999999999999999753           468999999988764 


Q ss_pred             --cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCC
Q 023613          161 --GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTEL  238 (280)
Q Consensus       161 --~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (280)
                        +.+++..|++||+|+.+|+++++.|++++||+||+|+||+++|+|.....+.                          
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~--------------------------  214 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPL--------------------------  214 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSB--------------------------
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCC--------------------------
Confidence              3456779999999999999999999999999999999999999997654432                          


Q ss_pred             CHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          239 TANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       239 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++++.++.++.++.......+|++|.+||+.
T Consensus       215 ~~~~~~~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         215 DVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             CHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             CchHHHHHHHHHHHhcCccCCCcEEEECCeE
Confidence            2233333333333333344589999999975

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.8e-42  Score=293.54  Aligned_cols=246  Identities=20%  Similarity=0.238  Sum_probs=197.9

Q ss_pred             ccCCcEEEEEcCCC--hHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGGAT--GIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa~~--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++..+...+.........+..+|+++++++.++++++.+.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            37899999999865  9999999999999999999999965444433322223456678999999999999999999999


Q ss_pred             CCccEEEECCCCCCCC--CCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           93 GTLDIMVNNAGISGAP--CPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      +++|++|||+|.....  ........+..+...+.++..+.....+.+.+.+  +..+.|+++++.....+.+....|++
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~a  159 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMGL  159 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhhH
Confidence            9999999999986441  1344455566677777777777777777666654  23456777777777778888899999


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHh
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFL  250 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L  250 (280)
                      +|+|+.+++++++.|++++|||||+|+||+++|++.......+.        ....... ..+.+|+++|+|||++++||
T Consensus       160 sK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~--------~~~~~~~-~~p~~r~~~pedIA~~v~fL  230 (274)
T d2pd4a1         160 AKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRM--------ILKWNEI-NAPLRKNVSLEEVGNAGMYL  230 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHH--------HHHHHHH-HSTTSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHH--------HHHHHhh-hhhccCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999776544321        2222223 34459999999999999999


Q ss_pred             cCCCCCCeeecEEEeCCcccc
Q 023613          251 ASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       251 ~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      +|+...++||++|.+|||++.
T Consensus       231 ~S~~s~~itG~~i~vDGG~~~  251 (274)
T d2pd4a1         231 LSSLSSGVSGEVHFVDAGYHV  251 (274)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hChhhCCCcCceEEECCChhh
Confidence            999999999999999999975

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=2.2e-42  Score=291.99  Aligned_cols=251  Identities=23%  Similarity=0.196  Sum_probs=206.0

Q ss_pred             ccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcchHHH-HHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNLGQQ-VCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa--~~giG~~la~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+ +.+.+.  .+...+.||+++++++.++++.+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~--~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP--AKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS--SCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcC--CceeeEeeecccccccccccchhhhc
Confidence            488999999995  5799999999999999999999999876644 333333  45667899999999999999999877


Q ss_pred             c---CCccEEEECCCCCCC---CCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC
Q 023613           92 F---GTLDIMVNNAGISGA---PCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP  165 (280)
Q Consensus        92 ~---~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~  165 (280)
                      +   +++|++|||+|+...   ...++.+.+.++|.+.+.+|+...+...+...+.+..   +.+++++|.....+.|++
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~~  157 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPAY  157 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTTT
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCccc
Confidence            5   679999999997532   1246678899999999999999999999998887543   456666777778888999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCch--hhhhhhhhhHHHHHhhhccCCCCCCCHHHH
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEE--ERTEDAMVGFRNFVARNANMQGTELTANDV  243 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  243 (280)
                      ..|+++|+|+.+|+++++.|++++|||||+|+||+++|++........  .........+.....+..++.+++.+|+|+
T Consensus       158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dv  237 (268)
T d2h7ma1         158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPV  237 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHH
T ss_pred             chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHH
Confidence            999999999999999999999999999999999999999876543222  111222233444445556665569999999


Q ss_pred             HHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          244 ANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       244 a~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      |++++||+|+..+|+||++|.+|||+.
T Consensus       238 a~~v~fL~Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         238 AKTVCALLSDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             HHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCcc
Confidence            999999999999999999999999994

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-43  Score=291.76  Aligned_cols=228  Identities=17%  Similarity=0.151  Sum_probs=195.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG--T   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   94 (280)
                      +||++|||||++|||+++|+.|+++|++|++++++++..         ......+.+|..+.++++.+.+.+.+.++  +
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE---------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQK   71 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccccceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999999999876531         12345667888889999998888887654  7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHH
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHA  174 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
                      +|++|||||..... ..+.+.+.++|++.+++|+.+++.+++.++|+|++  +|+||++||.++..+.+++..|++||+|
T Consensus        72 iD~lInnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaa  148 (236)
T d1dhra_          72 VDAILCVAGGWAGG-NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGA  148 (236)
T ss_dssp             EEEEEECCCCCCCB-CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             ceEEEECCcccccc-cchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHH
Confidence            99999999975432 45667778999999999999999999999999965  5999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHC--CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          175 VLGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       175 l~~~~~~la~e~~--~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      +++|+++|+.|++  ++||+||+|+||+++|++.+...+..+.                   +++.+|+++|+.+++|++
T Consensus       149 l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-------------------~~~~~pe~va~~~~~l~s  209 (236)
T d1dhra_         149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADF-------------------SSWTPLEFLVETFHDWIT  209 (236)
T ss_dssp             HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCG-------------------GGSEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchh-------------------hcCCCHHHHHHHHHHHhC
Confidence            9999999999998  5799999999999999997765553211                   456789999999999999


Q ss_pred             CCCCCeeecEEEe--CCcccccccc
Q 023613          253 DEARYISGTNLMV--DGGFTSVNHS  275 (280)
Q Consensus       253 ~~~~~~~G~~i~~--dgG~~~~~~~  275 (280)
                      +...+++|+.+.+  ++|.+...|.
T Consensus       210 ~~~~~i~G~~i~v~~~~g~t~~~p~  234 (236)
T d1dhra_         210 GNKRPNSGSLIQVVTTDGKTELTPA  234 (236)
T ss_dssp             TTTCCCTTCEEEEEEETTEEEEEEE
T ss_pred             CCccCCCCCeEEEEEECCEEEEEec
Confidence            9999999997765  6666655544

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-43  Score=296.15  Aligned_cols=219  Identities=24%  Similarity=0.279  Sum_probs=189.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHc-CCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKH-GAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++..++++. ..++.++.||++|.++++++++++.+++++||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            45599999999999999999986 89999999999999988888754 35788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC--------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------------  162 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--------------  162 (280)
                      +||||||+...  ....+.+.++|++++++|+++++.+++.++|.|++  .|+||+++|..+..+.              
T Consensus        84 iLVnNAGi~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~  159 (275)
T d1wmaa1          84 VLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSE  159 (275)
T ss_dssp             EEEECCCCCCC--TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             EEEEcCCcCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhccc
Confidence            99999999865  67778889999999999999999999999999965  5899999997764322              


Q ss_pred             ---------------------------CCCccchhhHHHHHHHHHHHHHHHCC----CCeEEEEEeCCeeeccccccCCC
Q 023613          163 ---------------------------LGPHAYTGSKHAVLGLNKNVAAELGK----YGIRVNCVSPYAVATGLALAHLP  211 (280)
Q Consensus       163 ---------------------------~~~~~Y~~sK~al~~~~~~la~e~~~----~gi~v~~v~pg~v~T~~~~~~~~  211 (280)
                                                 .+...|++||+++..|++.++++|++    .||+||+|+||+|+|+|..... 
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~-  238 (275)
T d1wmaa1         160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA-  238 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC-
T ss_pred             ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc-
Confidence                                       22356999999999999999999865    4899999999999999865432 


Q ss_pred             chhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc--CCCCCCeeecEEEeCCc
Q 023613          212 EEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA--SDEARYISGTNLMVDGG  268 (280)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~--s~~~~~~~G~~i~~dgG  268 (280)
                                               ..+|+|+|+.+++++  +++....+|+.+. |.+
T Consensus       239 -------------------------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~~  271 (275)
T d1wmaa1         239 -------------------------TKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  271 (275)
T ss_dssp             -------------------------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             -------------------------cCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CCE
Confidence                                     237999999999986  4566678999886 543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=4.5e-41  Score=283.45  Aligned_cols=241  Identities=27%  Similarity=0.383  Sum_probs=192.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch-HHHHHHHhCC--CCCeEEEecCC----CCHHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL-GQQVCQSLGG--EPDTFFCHCDV----TKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~-~~~~~~~~~~--~~~~~~~~~D~----~~~~~~~~~~~~~~~~   91 (280)
                      .++|||||++|||+++|++|+++|++|++++|+.+. .+++.+++..  ..+...+.+|+    ..++.+.++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999998654 4445555532  24555555544    4467788999999999


Q ss_pred             cCCccEEEECCCCCCCCCCCC-----------CCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-----CCceEEEEcc
Q 023613           92 FGTLDIMVNNAGISGAPCPDI-----------READLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----TKGTIISICS  155 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~iv~isS  155 (280)
                      +|++|++|||||+..+  ..+           .....+.+...+..|+.+.+...+...+.+...     ..+.++++++
T Consensus        82 ~g~iDilvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          82 FGRCDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HSCCCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             hCCCCEEEECCccCCC--Ccccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence            9999999999998754  222           233456688889999999999999888877553     3468889999


Q ss_pred             ccccccCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCC
Q 023613          156 VAGAIGGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG  235 (280)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (280)
                      ..+..+.+++..|++||+|+++|++++|.|++++|||||+|+||+++|++...   .+         +...+.+..++-+
T Consensus       160 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---~~---------~~~~~~~~~pl~r  227 (266)
T d1mxha_         160 AMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---QE---------TQEEYRRKVPLGQ  227 (266)
T ss_dssp             GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---HH---------HHHHHHTTCTTTS
T ss_pred             ccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---HH---------HHHHHHhcCCCCC
Confidence            99999999999999999999999999999999999999999999999986432   11         1222233344424


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccccc
Q 023613          236 TELTANDVANAVLFLASDEARYISGTNLMVDGGFTSVN  273 (280)
Q Consensus       236 ~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~  273 (280)
                      ++.+|||||++++||+|+++.|+||++|.+|||++...
T Consensus       228 ~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         228 SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence            45899999999999999999999999999999998753

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.2e-41  Score=284.67  Aligned_cols=223  Identities=19%  Similarity=0.185  Sum_probs=182.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC-
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG-   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   93 (280)
                      +.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+..  ..++.++.||++++++++++++.+.+.++ 
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK--DSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC--CTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhh--CCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            469999999999999999999999996  5888999999888765433  35788999999999999999999999876 


Q ss_pred             -CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-----------CCceEEEEcccccccc
Q 023613           94 -TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----------TKGTIISICSVAGAIG  161 (280)
Q Consensus        94 -~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~iv~isS~~~~~~  161 (280)
                       ++|++|||||+..+. .++.+.+.++|++.+++|+.+++.+++.++|+|++.           ..++++++++......
T Consensus        80 ~~idilinnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSY-GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GCCCEEEECCCCCCCB-CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCeEEEEEcCcccCCC-CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence             499999999987543 677889999999999999999999999999999754           2478999988766543


Q ss_pred             CC-------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCC
Q 023613          162 GL-------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQ  234 (280)
Q Consensus       162 ~~-------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
                      .+       +...|++||+|+.+|++.++.|++++||+||+|+||+|+|+|....                         
T Consensus       159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-------------------------  213 (250)
T d1yo6a1         159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-------------------------  213 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-------------------------
Confidence            32       3456999999999999999999999999999999999999986432                         


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       235 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                       ...+|+|.++.++.++.......+|+++..||-
T Consensus       214 -~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~  246 (250)
T d1yo6a1         214 -AALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             ------HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             -CCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCe
Confidence             234789999999999987777789999988864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-41  Score=283.56  Aligned_cols=216  Identities=18%  Similarity=0.210  Sum_probs=191.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.  .......+.+|+.+.+++..+.+.+.+.++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            899999999999999999999999999999999999999988877653  235677889999999999999999999999


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKH  173 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  173 (280)
                      .+|+++||||....  ..+.+.+.++|++++++|+.+++.+++.++|.|+ +++|+||++||.++..+.|++..|++||+
T Consensus        92 ~~~~li~nag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~-~~~G~ii~isS~~~~~~~p~~~~Y~asKa  168 (269)
T d1xu9a_          92 GLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKF  168 (269)
T ss_dssp             SCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             Cccccccccccccc--cccccCCHHHhhhheeeehhhHHHHHHHHHHHHH-hcCCcceEeccchhcCCCCCchHHHHHHH
Confidence            99999999998765  7888999999999999999999999999999996 45699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCC--CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          174 AVLGLNKNVAAELGK--YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       174 al~~~~~~la~e~~~--~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+++|+++|+.|+++  .||+||+|+||+|+|++..+..+....                   ....+|+++|+.++...
T Consensus       169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~~~-------------------~~~~~~e~~a~~i~~~~  229 (269)
T d1xu9a_         169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVH-------------------MQAAPKEECALEIIKGG  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGGGG-------------------GGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCCcc-------------------ccCCCHHHHHHHHHHHh
Confidence            999999999999974  579999999999999997655433211                   23457899999988766


Q ss_pred             CC
Q 023613          252 SD  253 (280)
Q Consensus       252 s~  253 (280)
                      ..
T Consensus       230 ~~  231 (269)
T d1xu9a_         230 AL  231 (269)
T ss_dssp             HT
T ss_pred             hc
Confidence            44

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.7e-40  Score=272.45  Aligned_cols=217  Identities=17%  Similarity=0.155  Sum_probs=182.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH--cCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK--FGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~~   95 (280)
                      .++||||||++|||+++|++|+++|++|++++|+++...         .....+.+|..+.++.....+.+.+.  ++++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            345799999999999999999999999999999875321         23445678888888888777777764  4789


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |+||||||+.... ....+.+.++|+.++++|+.+++.++++++|+|++  +|+||++||..+..+.+++..|+++|+|+
T Consensus        73 D~linnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal  149 (235)
T d1ooea_          73 DGVFCVAGGWAGG-SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAV  149 (235)
T ss_dssp             EEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             eEEEECCcccccc-cccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHH
Confidence            9999999986542 34555667889999999999999999999999965  58999999999999999999999999999


Q ss_pred             HHHHHHHHHHHC--CCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH-HhcC
Q 023613          176 LGLNKNVAAELG--KYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL-FLAS  252 (280)
Q Consensus       176 ~~~~~~la~e~~--~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~L~s  252 (280)
                      .+|+++|+.|++  +.+|+||+|+||+++|++.+...+....                   .++++|+++++.++ ++.+
T Consensus       150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~-------------------~~~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         150 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADH-------------------SSWTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCG-------------------GGCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCcc-------------------ccCCCHHHHHHHHHHHhcC
Confidence            999999999998  4689999999999999997766543211                   45779999999987 5556


Q ss_pred             CCCCCeeecEEEe
Q 023613          253 DEARYISGTNLMV  265 (280)
Q Consensus       253 ~~~~~~~G~~i~~  265 (280)
                      +..++++|+.+.+
T Consensus       211 ~~~~~~tG~~i~v  223 (235)
T d1ooea_         211 TSSRPSSGALLKI  223 (235)
T ss_dssp             GGGCCCTTCEEEE
T ss_pred             ccccCCCceEEEE
Confidence            6778899999998

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=8.7e-39  Score=268.09  Aligned_cols=221  Identities=27%  Similarity=0.365  Sum_probs=168.5

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CCccE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTLDI   97 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d~   97 (280)
                      |++|||||++|||+++|++|+++|++|++++|+++.                ..+|+.+.+.......+..... +.+|+
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~----------------~~~d~~~~~~~~~~~~~~~~~~~~~id~   65 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE----------------VIADLSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS----------------EECCTTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH----------------HHHHhcCHHHHHHHHHHHHHHhCCCCcE
Confidence            899999999999999999999999999999997642                2468999998888777666554 57999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc----------------
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------------  161 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~----------------  161 (280)
                      +|||||+...         .+.++....+|+.+...+.+..++.+.+.....+.++.+......                
T Consensus        66 lv~~Ag~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  136 (257)
T d1fjha_          66 LVLCAGLGPQ---------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             EEECCCCCTT---------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             EEEcCCCCCc---------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcE
Confidence            9999997532         234788899999999999999999887776666666665433221                


Q ss_pred             ------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh
Q 023613          162 ------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR  229 (280)
Q Consensus       162 ------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (280)
                                  .++..+|++||+|+++|+|++|.||+++|||||+|+||+++|++.......+...        ....+
T Consensus       137 ~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--------~~~~~  208 (257)
T d1fjha_         137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG--------ESIAK  208 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------------
T ss_pred             EEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHH--------HHHHh
Confidence                        1123469999999999999999999999999999999999999987655433221        11223


Q ss_pred             hccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccccc
Q 023613          230 NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTSV  272 (280)
Q Consensus       230 ~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~  272 (280)
                      ...|.+|+.+|+|||++++||+|+++.|+||++|.+|||++.+
T Consensus       209 ~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~tav  251 (257)
T d1fjha_         209 FVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAV  251 (257)
T ss_dssp             CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             cCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccch
Confidence            3345699999999999999999999999999999999999754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=1.6e-31  Score=223.94  Aligned_cols=223  Identities=17%  Similarity=0.159  Sum_probs=171.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCc---chHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQD---NLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~---~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++++|||||++|||+++|++|+++|++ |++++|+.   +..++..+++.. ..++.++.||++|+++++++++.+.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            3789999999999999999999999995 88899874   345555555432 367899999999999999999988654


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                       +++|++|||+|+...  .++.+.+.++|++.+++|+.+++++.+.+.    ....++||++||..+..+.+++..|+++
T Consensus        88 -~~i~~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~~~~iv~~SS~a~~~g~~~~~~YaAa  160 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASAFGAPGLGGYAPG  160 (259)
T ss_dssp             -SCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             -ccccccccccccccc--cccccccHHHHHHHhhhhccchhHHHHHhh----ccCCceEeeecchhhccCCcccHHHHHH
Confidence             689999999999876  889999999999999999999998877543    3556899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      |+++++|++.++    ..|+++++|+||.+.++........+            .+.+ ..  -..++|+++++++..++
T Consensus       161 ka~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~~~------------~~~~-~G--~~~~~~~~~~~~l~~~l  221 (259)
T d2fr1a1         161 NAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVAD------------RFRR-HG--VIEMPPETACRALQNAL  221 (259)
T ss_dssp             HHHHHHHHHHHH----HTTCCCEEEEECCBC------------------------CTT-TT--EECBCHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHH----hCCCCEEECCCCcccCCccccchHHH------------HHHh-cC--CCCCCHHHHHHHHHHHH
Confidence            999998876654    45899999999998655322111000            0000 00  13468999999999888


Q ss_pred             CCCCCCeeecEEEeCC
Q 023613          252 SDEARYISGTNLMVDG  267 (280)
Q Consensus       252 s~~~~~~~G~~i~~dg  267 (280)
                      ....  ..+.++.+|.
T Consensus       222 ~~~~--~~~~v~~~d~  235 (259)
T d2fr1a1         222 DRAE--VCPIVIDVRW  235 (259)
T ss_dssp             HTTC--SSCEECEECH
T ss_pred             hCCC--ceEEEEeCcH
Confidence            6543  3344455554

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.1e-20  Score=164.60  Aligned_cols=231  Identities=13%  Similarity=0.076  Sum_probs=160.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-----hHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-----LGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .|+||||||+|.||++++++|++.|+.|++++|...     ..+.+.+... ...++.++.+|++|.++++++++..   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            389999999999999999999999999999998532     2222222221 2357899999999999999888865   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccc-----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAI-----------  160 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-----------  160 (280)
                        ++|+++|+|+.....      .+.++.+..+++|+.+..++++++...-. ++..++|++||....-           
T Consensus        78 --~~d~v~h~aa~~~~~------~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E~~  148 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVA------VSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKETT  148 (357)
T ss_dssp             --CCSEEEECCCCCTTT------TTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEEeecccccc------hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCCCC
Confidence              899999999986541      23455678899999999999999876422 2346899999865321           


Q ss_pred             cCCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc--------c
Q 023613          161 GGLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------N  232 (280)
Q Consensus       161 ~~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  232 (280)
                      +..+...|+.+|.+.+.+++.+++.+   ++.+..+.|+.+.+|............    ..+........        .
T Consensus       149 ~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~----~~~~~~~~~~~~~~~~g~~~  221 (357)
T d1db3a_         149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKIT----RAIANIAQGLESCLYLGNMD  221 (357)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHH----HHHHHHHTTSCCCEEESCTT
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHH----HHHHHHHhCCCceEEECCCC
Confidence            11235689999999999999998875   688899999999998644332211110    11111111111        1


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ....++.++|++++++.++...    .|+.+++.+|...
T Consensus       222 ~~r~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         222 SLRDWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             CEECCEEHHHHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             eeecceeechHHHHHHHHHhCC----CCCeEEECCCCce
Confidence            1135899999999999888543    4677888776653

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.84  E-value=1.1e-22  Score=161.99  Aligned_cols=154  Identities=12%  Similarity=0.109  Sum_probs=114.5

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+.+.....+.+..+|+++.+++++++       
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-------
Confidence            4589999999999999999999999999999999999999999888887765445567889999998876554       


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-CCCCccchhh
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-GLGPHAYTGS  171 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-~~~~~~Y~~s  171 (280)
                      +++|+||||||+..      ...+.++|++.+++|+.+.++....+.+.+.... .....+++.....+ ..+...|+++
T Consensus        91 ~~iDilin~Ag~g~------~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~s  163 (191)
T d1luaa1          91 KGAHFVFTAGAIGL------ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKLH  163 (191)
T ss_dssp             TTCSEEEECCCTTC------CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHHH
T ss_pred             cCcCeeeecCcccc------ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHHH
Confidence            58999999999642      3578899999999999888765544433332222 22222232222211 1133569999


Q ss_pred             HHHHHHHHH
Q 023613          172 KHAVLGLNK  180 (280)
Q Consensus       172 K~al~~~~~  180 (280)
                      |+++..+++
T Consensus       164 k~a~~~l~~  172 (191)
T d1luaa1         164 RACIAKLFE  172 (191)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHHh
Confidence            999887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.80  E-value=2.7e-19  Score=155.86  Aligned_cols=227  Identities=15%  Similarity=0.112  Sum_probs=158.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEE-EEecCcchH-HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLG-QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~-~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +||||||+|.||++++++|++.|+.|+ ++++..... ....+.+....++.++.+|++|.+.+..+++..     ++|+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            489999999999999999999999854 455422111 111222333467899999999999998887754     8999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-----CCceEEEEcccccccc-----------
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-----TKGTIISICSVAGAIG-----------  161 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~iv~isS~~~~~~-----------  161 (280)
                      |||+|+....      ..+.++..+.+++|+.+...+++.+.......     ...++|++||....-.           
T Consensus        77 VihlAa~~~~------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (361)
T d1kewa_          77 VMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             EEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             EEECccccch------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence            9999986532      13345567889999999999999988764322     2358999999775421           


Q ss_pred             ----------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc
Q 023613          162 ----------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       162 ----------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                                ..+...|+.+|.+.+.+++.++..+   |+.+..+.|+.+..|.......-..       ..........
T Consensus       151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~-------~i~~~~~g~~  220 (361)
T d1kewa_         151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPL-------VILNALEGKP  220 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHH-------HHHHHHHTCC
T ss_pred             CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHH-------HHHHHHcCCC
Confidence                      1123569999999999999998775   6889999999999886432110000       0111122211


Q ss_pred             c-C------CCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          232 N-M------QGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       232 ~-~------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      . +      ...++.++|+|+++..++....   .|+.+++..|..
T Consensus       221 ~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~  263 (361)
T d1kewa_         221 LPIYGKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNE  263 (361)
T ss_dssp             EEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCE
T ss_pred             cEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCC
Confidence            1 1      1236899999999999986532   477888877754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=7.8e-18  Score=147.89  Aligned_cols=173  Identities=16%  Similarity=0.046  Sum_probs=129.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC----------------c----chHHHHHHHhCCCCCeEEEecCCCC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQ----------------D----NLGQQVCQSLGGEPDTFFCHCDVTK   77 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~----------------~----~~~~~~~~~~~~~~~~~~~~~D~~~   77 (280)
                      ||+||||||+|.||.+++++|++.|++|++++.-                .    +.+........  .++.++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--KSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--CCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcC--CCcEEEEccCCC
Confidence            7899999999999999999999999999998621                0    11111111112  468899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccc
Q 023613           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVA  157 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~  157 (280)
                      .+.++++++..     ++|+|||.|+....   .....+.+.....+++|+.+..++++++...-   ...++++.||..
T Consensus        79 ~~~l~~~~~~~-----~~d~ViHlAa~~~~---~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~---~~~~~i~~ss~~  147 (393)
T d1i24a_          79 FEFLAESFKSF-----EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGTMG  147 (393)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECCGG
T ss_pred             HHHHHHHHHhh-----cchheecccccccc---ccccccccccccccccccccccHHHHHHHHhc---cccceeeccccc
Confidence            99999888865     89999999987542   23345667778899999999999999887642   234566666654


Q ss_pred             cccc------------------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecccc
Q 023613          158 GAIG------------------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       158 ~~~~------------------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~  206 (280)
                      ....                        ..+...|+.+|.+.+.+++.+++++   ++++..+.|+.+..+..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         148 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  217 (393)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             cccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCc
Confidence            3211                        1223469999999999999888774   68999999999988753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1.4e-17  Score=143.36  Aligned_cols=233  Identities=15%  Similarity=0.140  Sum_probs=159.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc----chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQD----NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .+|||||+|.||+.+++.|++.|++|++++|-.    ...... +... ..++.++++|++|.+.+.++++..     ++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI-ERLG-GKHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHH-HHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-Hhhc-CCCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            499999999999999999999999999987632    122222 2222 247889999999999988777744     79


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC------------C
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG------------L  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------------~  163 (280)
                      |+|||+|+....      ..+.++..+.+++|+.++.++++++...    +-.++|++||.+...+.            .
T Consensus        75 d~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  144 (338)
T d1udca_          75 DTVIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGT  144 (338)
T ss_dssp             SEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             CEEEECCCccch------hhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccccccccccCC
Confidence            999999986432      1334456789999999999999998765    23579999987765322            1


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh--hhhhhhhHHHHHhhhc----------
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVARNA----------  231 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----------  231 (280)
                      +...|+.+|.+.+.+++....++  .++.+..+.|+.+.++...........  .......+........          
T Consensus       145 p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~  222 (338)
T d1udca_         145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCS
T ss_pred             CcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCc
Confidence            35689999999999998877774  468888899999988764433221110  0000000111000000          


Q ss_pred             -----cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          232 -----NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       232 -----~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                           ...+.++.++|++.++..+.........++++++.++...
T Consensus       223 ~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~  267 (338)
T d1udca_         223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCE
T ss_pred             ccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCC
Confidence                 0012367889999888776654444557888999887643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.76  E-value=1.6e-17  Score=143.28  Aligned_cols=227  Identities=13%  Similarity=0.038  Sum_probs=153.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh---CCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL---GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .||+||||||+|.||+++++.|.++|++|+++.|+......+....   .......++..|+.+.+++..++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            4999999999999999999999999999999999876655443322   222344557789999887665543       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC----------
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL----------  163 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~----------  163 (280)
                      +.|+++|+++....      ..+   ....+..|+.+..++++.+...   ..-.++|++||..+.....          
T Consensus        83 ~~~~v~~~a~~~~~------~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~e  150 (342)
T d1y1pa1          83 GAAGVAHIASVVSF------SNK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDE  150 (342)
T ss_dssp             TCSEEEECCCCCSC------CSC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred             cchhhhhhcccccc------ccc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccccc
Confidence            78999999986532      122   3566788999999988887653   2347899999976432111          


Q ss_pred             ---------------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhh
Q 023613          164 ---------------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG  222 (280)
Q Consensus       164 ---------------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~  222 (280)
                                           ....|+.+|.+.+.+++.+++++. .++++..++|+.+..+............    ..
T Consensus       151 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~----~~  225 (342)
T d1y1pa1         151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTS----GW  225 (342)
T ss_dssp             TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHH----HH
T ss_pred             cccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchH----HH
Confidence                                 123699999999999999988875 4688889999998877543222111100    01


Q ss_pred             HHHHHhhh------ccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          223 FRNFVARN------ANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       223 ~~~~~~~~------~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      .....+..      ......++.++|+|++++..+..  ....|+.+...++.
T Consensus       226 ~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~--~~~~g~~~~~~~~~  276 (342)
T d1y1pa1         226 MMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAGT  276 (342)
T ss_dssp             HHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCEE
T ss_pred             HHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcC--ccccceEEEEcCCc
Confidence            11111110      11113478899999998776643  23466666555443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.7e-17  Score=140.91  Aligned_cols=217  Identities=11%  Similarity=0.021  Sum_probs=148.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-----hHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-----LGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++|||||+|.||++++++|.++|++|++++|...     .++.+......  ..++.++.+|++|.+.+.++++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            44599999999999999999999999999998542     11211111111  246889999999999998888765   


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc----------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------  161 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~----------  161 (280)
                        ++++++|.++....      ..+.+.....+++|+.+..++++++...-. .+..++|++||.+....          
T Consensus        79 --~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~  149 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETT  149 (347)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --ccceeeeeeecccc------chhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCC
Confidence              88899999876432      234455677889999999999998876532 22358999998664211          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc--------c
Q 023613          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA--------N  232 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  232 (280)
                       ..+...|+.||.+.+.+++.+++.+   ++.+..+.|+.+..|.............    ..........        .
T Consensus       150 ~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~----~i~~~~~~~~~~~~~g~g~  222 (347)
T d1t2aa_         150 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISR----SVAKIYLGQLECFSLGNLD  222 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHH----HHHHHHHTSCSCEEESCTT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccce----eeehhhcCCcceeecCCCc
Confidence             1134679999999999999987774   6788889999888875333221111100    0111111111        1


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCC
Q 023613          233 MQGTELTANDVANAVLFLASDE  254 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~  254 (280)
                      ..+.++.++|+++++..++...
T Consensus       223 ~~r~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         223 AKRDWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             CEECCEEHHHHHHHHHHHHHSS
T ss_pred             ceeeeeEecHHHHHHHHHhhcC
Confidence            1235789999999999888653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=2.9e-17  Score=140.07  Aligned_cols=226  Identities=16%  Similarity=0.092  Sum_probs=154.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH-HHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG-QQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      |+||||||+|.||++++++|.++|++|++++|..... ....+.+....++.++.+|++|.+++.+.+...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            7899999999999999999999999999999865321 122334444467899999999999988777755     7788


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc------------CCCC
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------GLGP  165 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------~~~~  165 (280)
                      ++++++....      ....++....++.|+.+..++++++...-   ...++++.||.. ..+            ..+.
T Consensus        76 ~~~~a~~~~~------~~~~~~~~~~~~~n~~g~~~~l~~~~~~~---~~~~~i~~Ss~~-~~~~~~~~~~~E~~~~~p~  145 (321)
T d1rpna_          76 VYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQFS---PETRFYQASTSE-MFGLIQAERQDENTPFYPR  145 (321)
T ss_dssp             EEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHHC---TTSEEEEEEEGG-GGCSCSSSSBCTTSCCCCC
T ss_pred             cccccccccc------cccccchHHHHhhhhhchHHHHHHHHHhC---CCcccccccchh-hcCcccCCCCCCCCCcccc
Confidence            8888876432      12223467889999999999999887642   224566666544 332            1134


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc--------CCCCC
Q 023613          166 HAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN--------MQGTE  237 (280)
Q Consensus       166 ~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  237 (280)
                      ..|+.+|.+.+.+++.++.++   ++++..+.|+.+..|..........    ....+.........        ..+.+
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~----i~~~~~~~~~~~~~~i~~g~g~~~r~~  218 (321)
T d1rpna_         146 SPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRK----VTDAVARIKLGKQQELRLGNVDAKRDW  218 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHH----HHHHHHHHHTTSCSCEEESCTTCEEEC
T ss_pred             ChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHH----HHHHHHHHHhCCCCcEEECCCCeEEcc
Confidence            789999999999999998774   6788889998888876433221110    00111111111111        11247


Q ss_pred             CCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          238 LTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       238 ~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      +.++|+|++++.++....    +..+++.+|..
T Consensus       219 i~v~D~~~~~~~~~~~~~----~~~~ni~~~~~  247 (321)
T d1rpna_         219 GFAGDYVEAMWLMLQQDK----ADDYVVATGVT  247 (321)
T ss_dssp             EEHHHHHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             EEeHHHHHHHHHHHhcCC----cCCceeccccc
Confidence            899999999999886432    34566666643

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=5.7e-17  Score=139.62  Aligned_cols=231  Identities=14%  Similarity=0.034  Sum_probs=159.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc----hHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN----LGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+-|++|||||+|.||++++++|.+.|++|++++|...    ...........  ..++.++.+|+.|........    
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----   89 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----   89 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc----
Confidence            35789999999999999999999999999999986322    22222111111  147889999999987654332    


Q ss_pred             HHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--------
Q 023613           90 EKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------  161 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--------  161 (280)
                         ...+.++|.+.....      ..+.++....+++|+.+..++++++...    +-.++|++||......        
T Consensus        90 ---~~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E  156 (341)
T d1sb8a_          90 ---AGVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPKVE  156 (341)
T ss_dssp             ---TTCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ---ccccccccccccccc------cccccCccchhheeehhHHHHHHHHHhc----CCceEEEcccceeeCCCCCCCccC
Confidence               388889988875432      2356678889999999999999988763    3468999999876432        


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhcc------
Q 023613          162 ---GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNAN------  232 (280)
Q Consensus       162 ---~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  232 (280)
                         ..+...|+.+|.+.+.+++.+++.+   ++++..+.|+.+.++.............   ........+...      
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~---~~~~~~~~g~~i~~~g~g  230 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIP---KWTSSMIQGDDVYINGDG  230 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHH---HHHHHHHHTCCCEEESSS
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHH---HHHHHHHcCCceEEcCCC
Confidence               1234789999999999999998875   6888999999998876443322111100   011122211111      


Q ss_pred             -CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          233 -MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       233 -~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                       ....++.++|++.++..++.... ...|+.+++.++..
T Consensus       231 ~~~r~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~  268 (341)
T d1sb8a_         231 ETSRDFCYIENTVQANLLAATAGL-DARNQVYNIAVGGR  268 (341)
T ss_dssp             CCEECCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSCC
T ss_pred             CEEEEEEEEeccchhhhhhhhccc-cccceeeeeccccc
Confidence             12358899999999988875433 34677888776543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=7e-17  Score=140.19  Aligned_cols=226  Identities=14%  Similarity=-0.005  Sum_probs=155.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++..||||||+|.||++|+++|.++|+.|+++++.......  ..   .....+..+|+.+.+.+.++++       ++|
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~-------~~d   81 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--ED---MFCDEFHLVDLRVMENCLKVTE-------GVD   81 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GG---GTCSEEEECCTTSHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hh---cccCcEEEeechhHHHHHHHhh-------cCC
Confidence            36679999999999999999999999999998875432110  00   1245677889999887755543       899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC--------------
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--------------  162 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--------------  162 (280)
                      .+||.|+....     .....+.....+.+|+.+..++++++...    +-.++|++||.......              
T Consensus        82 ~Vih~a~~~~~-----~~~~~~~~~~~~~~n~~gt~~ll~~~~~~----~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e  152 (363)
T d2c5aa1          82 HVFNLAADMGG-----MGFIQSNHSVIMYNNTMISFNMIEAARIN----GIKRFFYASSACIYPEFKQLETTNVSLKESD  152 (363)
T ss_dssp             EEEECCCCCCC-----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             eEeeccccccc-----ccccccccccccccccchhhHHHHhHHhh----Ccccccccccccccccccccccccccccccc
Confidence            99999987542     11223456788899999999988887663    34689999997764421              


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc------c
Q 023613          163 ----LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA------N  232 (280)
Q Consensus       163 ----~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  232 (280)
                          .+...|+.+|.+.+.+++.+.+++   |+++..+.|+.+..+................. .........      .
T Consensus       153 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~g~  228 (363)
T d2c5aa1         153 AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCR-KAQTSTDRFEMWGDGL  228 (363)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHH-HHHHCSSCEEEESCSC
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCccccccccccccccc-ccccccccccccCCCC
Confidence                124579999999999999988775   78999999999988764332222111111000 000000000      0


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ....++..+|++++++.++...    .|+.+++.+|...
T Consensus       229 ~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~  263 (363)
T d2c5aa1         229 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  263 (363)
T ss_dssp             CEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             eEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcc
Confidence            1245889999999999988543    4677888877654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.74  E-value=9.3e-17  Score=138.78  Aligned_cols=223  Identities=15%  Similarity=0.047  Sum_probs=152.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ++||+||||||+|.||+++++.|+++|+.|++++|+......+.+.......+.++.+|++|++.+.++++..     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            6899999999999999999999999999999999987665555555444457889999999999988777654     89


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc------------CC
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG------------GL  163 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~------------~~  163 (280)
                      |+++|.|+....      ..+.+..+..+.+|+.+...+++++...   .....+++.|+......            ..
T Consensus        81 ~~v~~~aa~~~~------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          81 EIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             SEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhccccc------cccccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccC
Confidence            999999986432      2345567889999999999999988764   22234555544333221            11


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCC------CCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCC
Q 023613          164 GPHAYTGSKHAVLGLNKNVAAELGK------YGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTE  237 (280)
Q Consensus       164 ~~~~Y~~sK~al~~~~~~la~e~~~------~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (280)
                      +...|+.+|.+.+.+.+.++.++..      +++.+..+.|+.+..+.......-........................+
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  231 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  231 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccc
Confidence            3467999999999999998887643      3688999999988876532211000000000000000000011112346


Q ss_pred             CCHHHHHHHHHHhcC
Q 023613          238 LTANDVANAVLFLAS  252 (280)
Q Consensus       238 ~~~~dva~~~~~L~s  252 (280)
                      +..+|++.++..++.
T Consensus       232 ~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         232 QHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             EETHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhh
Confidence            778899999877764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=3.8e-17  Score=140.30  Aligned_cols=220  Identities=14%  Similarity=0.022  Sum_probs=149.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-----hHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-----LGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-----~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .|++|||||+|.||++++++|+++|++|++++|...     ....+.....  ....+.++.+|+++.+++.+.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            389999999999999999999999999999998532     2211111111  1246788999999999988877754  


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEcccccccc--------
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISICSVAGAIG--------  161 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~--------  161 (280)
                         ++|+|||+|+....      ..+.++....+..|+.+...+.+++.....+. ...++++.||......        
T Consensus        79 ---~~D~Vih~Aa~~~~------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~  149 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET  149 (339)
T ss_dssp             ---CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT
T ss_pred             ---ccchhhhccccccc------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCC
Confidence               89999999987542      23345667889999999999888887543332 2345565555443222        


Q ss_pred             --CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh-c-------
Q 023613          162 --GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN-A-------  231 (280)
Q Consensus       162 --~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------  231 (280)
                        ..+...|+.+|.+.+.+++.+.+.+   ++.+..+.|+.+..|............    .......... .       
T Consensus       150 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~----~~~~~~~~~~~~~~~~g~~  222 (339)
T d1n7ha_         150 TPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKIT----RALGRIKVGLQTKLFLGNL  222 (339)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHH----HHHHHHHHTSCCCEEESCT
T ss_pred             CCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhh----HHHHHHhcCCCCeEEeCCC
Confidence              2245689999999999999988774   689999999999888643322111100    0011111110 0       


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCC
Q 023613          232 NMQGTELTANDVANAVLFLASDEA  255 (280)
Q Consensus       232 ~~~~~~~~~~dva~~~~~L~s~~~  255 (280)
                      .....++.++|+|+++..++....
T Consensus       223 ~~~rd~~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         223 QASRDWGFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             TCEEECEEHHHHHHHHHHHHTSSS
T ss_pred             CccccceeeehHHHHHHHHHhcCC
Confidence            011247889999999999886543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.9e-17  Score=141.14  Aligned_cols=219  Identities=13%  Similarity=0.073  Sum_probs=146.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .|+||||||+|.||++++++|.++|++|+++++................++.....|+.+.            .+.++|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~~d~   68 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP------------LYIEVDQ   68 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC------------CCCCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH------------HHcCCCE
Confidence            3789999999999999999999999999998863322111112222234455555665432            1247999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc----------------
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG----------------  161 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~----------------  161 (280)
                      |||+|+....  .    ...++..+.+++|+.+..++++++...     .-++|++||.+....                
T Consensus        69 VihlAa~~~~--~----~~~~~~~~~~~~Nv~g~~~ll~~~~~~-----~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~  137 (312)
T d2b69a1          69 IYHLASPASP--P----NYMYNPIKTLKTNTIGTLNMLGLAKRV-----GARLLLASTSEVYGDPEVHPQSEDYWGHVNP  137 (312)
T ss_dssp             EEECCSCCSH--H----HHTTCHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             EEECcccCCc--h----hHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEEEChheecCCCCCCCCccccCCCCC
Confidence            9999986542  1    112345778899999999999987653     247999998655431                


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc-------cCC
Q 023613          162 GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA-------NMQ  234 (280)
Q Consensus       162 ~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  234 (280)
                      ..+...|+.+|.+.+.+++.+++++   |+.+..+.|+.+..|........  ...   ...........       ...
T Consensus       138 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~--~i~---~~i~~~~~g~~i~i~~~g~~~  209 (312)
T d2b69a1         138 IGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGR--VVS---NFILQALQGEPLTVYGSGSQT  209 (312)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCC--HHH---HHHHHHHHTCCEEEESSSCCE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCcc--HHH---HHHHHHHcCCCeEEeCCCCee
Confidence            1234679999999999999998885   78999999999998764332111  000   01111111111       112


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          235 GTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       235 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ..++..+|++++++.++...    .+..+++.+|...
T Consensus       210 r~~i~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         210 RAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             EECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             EccEEHHHHHHHHHHHHhhc----cCCceEecCCccc
Confidence            35788999999999988543    3556788777654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.4e-16  Score=127.56  Aligned_cols=198  Identities=13%  Similarity=0.080  Sum_probs=130.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ..|+++||||+|+||++++++|+++|++|.++.|+.+++...     ....+.++.+|++|.+++.++++       +.|
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----~~~~~~~~~gD~~d~~~l~~al~-------~~d   69 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----cccccccccccccchhhHHHHhc-------CCC
Confidence            468899999999999999999999999999999998764321     12457889999999998766655       789


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCC----ccchhhH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGP----HAYTGSK  172 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~----~~Y~~sK  172 (280)
                      ++|+++|...+  .  ...         +++..+..++++++    ++++-.++|++||.......+..    ..|...|
T Consensus        70 ~vi~~~g~~~~--~--~~~---------~~~~~~~~~l~~aa----~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~  132 (205)
T d1hdoa_          70 AVIVLLGTRND--L--SPT---------TVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDH  132 (205)
T ss_dssp             EEEECCCCTTC--C--SCC---------CHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHH
T ss_pred             EEEEEeccCCc--h--hhh---------hhhHHHHHHHHHHH----HhcCCCeEEEEeeeeccCCCccccccccccchHH
Confidence            99999987533  1  111         23334444444443    34555799999987654443322    2344444


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      ...+.+       +...+++...|.||.+...-.........               .......+++.+|+|++++.++.
T Consensus       133 ~~~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~~~~---------------~~~~~~~~i~~~DvA~~~~~~l~  190 (205)
T d1hdoa_         133 IRMHKV-------LRESGLKYVAVMPPHIGDQPLTGAYTVTL---------------DGRGPSRVISKHDLGHFMLRCLT  190 (205)
T ss_dssp             HHHHHH-------HHHTCSEEEEECCSEEECCCCCSCCEEES---------------SSCSSCSEEEHHHHHHHHHHTTS
T ss_pred             HHHHHH-------HHhcCCceEEEecceecCCCCcccEEEee---------------CCCCCCCcCCHHHHHHHHHHHhC
Confidence            444433       33468999999999885432221111000               00111456899999999999996


Q ss_pred             CCCCCeeecEEEeCC
Q 023613          253 DEARYISGTNLMVDG  267 (280)
Q Consensus       253 ~~~~~~~G~~i~~dg  267 (280)
                      ...  ..|+.+.+.+
T Consensus       191 ~~~--~~g~~~~~s~  203 (205)
T d1hdoa_         191 TDE--YDGHSTYPSH  203 (205)
T ss_dssp             CST--TTTCEEEEEC
T ss_pred             CCC--CCCEEEecCC
Confidence            543  4578776644

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=6.6e-17  Score=139.16  Aligned_cols=225  Identities=12%  Similarity=0.075  Sum_probs=154.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           20 VALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +||||||+|.||++++++|+++| +.|+++++..+...    .+....++.++.+|+++.+++.+.+   .   .++|+|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~----~~~~~~~~~~i~~Di~~~~~~~~~~---~---~~~d~V   71 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS----RFLNHPHFHFVEGDISIHSEWIEYH---V---KKCDVV   71 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG----GGTTCTTEEEEECCTTTCSHHHHHH---H---HHCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchh----hhccCCCeEEEECccCChHHHHHHH---H---hCCCcc
Confidence            48999999999999999999999 57888887654332    2223467999999999876654322   1   269999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC---------------
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL---------------  163 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~---------------  163 (280)
                      ||+|+....      ....++....+++|+.+..++++.+...     +-+++++||........               
T Consensus        72 ih~a~~~~~------~~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~  140 (342)
T d2blla1          72 LPLVAIATP------IEYTRNPLRVFELDFEENLRIIRYCVKY-----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (342)
T ss_dssp             EECBCCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             ccccccccc------cccccCCccccccccccccccccccccc-----cccccccccccccccccccccccccccccccc
Confidence            999997643      1233445678999999999999987653     24567777655433211               


Q ss_pred             ---CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhh-hHHHHHhhhc-------c
Q 023613          164 ---GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMV-GFRNFVARNA-------N  232 (280)
Q Consensus       164 ---~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~  232 (280)
                         +...|+.+|.+.+.+++.+++.+   |+.+..+.|..+..+................. ..........       .
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~  217 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             cCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCC
Confidence               22569999999999999998885   68899999998888765443322211111111 1111111111       1


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      ....++.++|+++++..++........|+.+++.+|
T Consensus       218 ~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            113488999999999999976555566899999654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.8e-16  Score=134.56  Aligned_cols=234  Identities=13%  Similarity=0.092  Sum_probs=158.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC------c----chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQ------D----NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~------~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      |+||||||+|.||++++++|++.|+.|+++++.      .    +..... +... ..++.++.+|++|.+.+.+++.. 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~Dl~d~~~l~~~~~~-   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRV-QELT-GRSVEFEEMDILDQGALQRLFKK-   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHH-HHHH-TCCCEEEECCTTCHHHHHHHHHH-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHH-HHhc-CCCcEEEEeeccccccccccccc-
Confidence            788999999999999999999999999998641      1    122222 2222 25788999999999998776663 


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC------
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG------  162 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------  162 (280)
                          ..+++++|.|+....      ..+.++..+.+++|+.+..++++++..    .+-.+++++||.......      
T Consensus        80 ----~~~~~i~h~Aa~~~~------~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~~~  145 (346)
T d1ek6a_          80 ----YSFMAVIHFAGLKAV------GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLD  145 (346)
T ss_dssp             ----CCEEEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred             ----cccccccccccccCc------HhhHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeecccccccc
Confidence                378999999987542      233445678899999999998888765    333578888876554321      


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh--hhhhhhhHHHHHh-hhc--
Q 023613          163 ------LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER--TEDAMVGFRNFVA-RNA--  231 (280)
Q Consensus       163 ------~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~--  231 (280)
                            .....|+.+|.+.+...+.+++.  ..++....+.|+.+.++......+....  .......+..... +..  
T Consensus       146 ~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  223 (346)
T d1ek6a_         146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREAL  223 (346)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCE
T ss_pred             ccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcE
Confidence                  13457999999999998887654  3468888899988887753322211100  0000011111111 000  


Q ss_pred             ------------cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          232 ------------NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       232 ------------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                                  ...+.++.++|+|.++..+.........++++++.+|...
T Consensus       224 ~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         224 NVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             EEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             EEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence                        0013478999999999887655555667889999888665

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.71  E-value=1.8e-17  Score=141.72  Aligned_cols=220  Identities=16%  Similarity=0.148  Sum_probs=153.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEE------ecC--cchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIA------DVQ--DNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~------~r~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++|||||+|.||+++++.|+++|+.|..+      +..  ...... ........++.++..|+.+.......       
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~-------   73 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN-LAPVDADPRLRFVHGDIRDAGLLARE-------   73 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG-GGGGTTCTTEEEEECCTTCHHHHHHH-------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhH-hhhhhcCCCeEEEEeccccchhhhcc-------
Confidence            48999999999999999999999865433      221  111111 12233346788999999998766533       


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC---------
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG---------  162 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---------  162 (280)
                      ...+|.++|+|+....      ....+...+.+++|+.+..++++++...    +..++|++||.....+.         
T Consensus        74 ~~~~d~vi~~a~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~~~~I~~Ss~~~yg~~~~~~~~E~~  143 (322)
T d1r6da_          74 LRGVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESS  143 (322)
T ss_dssp             TTTCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             ccccceEEeecccccc------cccccchHHHhhhhHHHHHHHHHHHHHc----CCceEEEeecceeecCCCCCCCCCCC
Confidence            2489999999986533      2344556788899999999999988753    34689999987764332         


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhH-HHHHhhhc-c------
Q 023613          163 --LGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGF-RNFVARNA-N------  232 (280)
Q Consensus       163 --~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~------  232 (280)
                        .+...|+.+|.+.+.+++.+++++   |+.+..+.|+.+..+.......        ...+ ........ .      
T Consensus       144 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~--------i~~~i~~~~~~~~i~v~~~g~  212 (322)
T d1r6da_         144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKL--------IPLFVTNLLDGGTLPLYGDGA  212 (322)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSH--------HHHHHHHHHTTCCEEEETTSC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcH--------HHHHHHHHHcCCCcEEecCCC
Confidence              134689999999999999998874   6899999999999875332110        0011 11111110 0      


Q ss_pred             CCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCcccc
Q 023613          233 MQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      ....++.++|+|++++.++....   .|+.+++.+|...
T Consensus       213 ~~r~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~  248 (322)
T d1r6da_         213 NVREWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLEL  248 (322)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             eEEccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccc
Confidence            11247899999999999996543   4788888877654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.71  E-value=3.6e-16  Score=133.70  Aligned_cols=231  Identities=18%  Similarity=0.141  Sum_probs=147.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc-chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQD-NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      +||||||+|.||++++++|+++|++|+++++-. .......+.+....++.++.+|+++.+++.++++..     ++|+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            589999999999999999999999999987522 112222233333457889999999999998888755     79999


Q ss_pred             EECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC---------------
Q 023613           99 VNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL---------------  163 (280)
Q Consensus        99 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~---------------  163 (280)
                      ||+|+....      ....++....+++|+.++.++++++...    +..+.++.+|.....+.+               
T Consensus        77 ih~aa~~~~------~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          77 FHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             Eeecccccc------cccccChHHHHHHHHHHHHHHHHhhhcc----ccccccccccccccccccccccccccccccccc
Confidence            999987532      1233456889999999999999987664    234555556554433221               


Q ss_pred             -------------CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh-
Q 023613          164 -------------GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-  229 (280)
Q Consensus       164 -------------~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-  229 (280)
                                   +...|+.+|...+.+.......+.   +....+.|..+..+.............- .......... 
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  222 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG---LNTVVFRHSSMYGGRQFATYDQGWVGWF-CQKAVEIKNGI  222 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCEECTTCCCBTTBCHHHHH-HHHHHHHHTTC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhccC---cccccccccceeeccccccccccccchh-hHHHHHHHhcc
Confidence                         345789999999999998888864   4444444444433322221111100000 0000000000 


Q ss_pred             --------hccCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          230 --------NANMQGTELTANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       230 --------~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                              .......++..+|++++++.++... ....|+.+++.+|..
T Consensus       223 ~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~~  270 (338)
T d1orra_         223 NKPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTIV  270 (338)
T ss_dssp             CCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCGG
T ss_pred             CCceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcccccccccc
Confidence                    0001134678999999999887432 245788888876643

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=4.2e-16  Score=134.45  Aligned_cols=171  Identities=16%  Similarity=0.146  Sum_probs=127.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc-hHHHH--HHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDN-LGQQV--CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~-~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      |+||||||+|.||+++++.|++.|++|+++++... .....  .+... ..++.++.+|++|.++++.+++..     ++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc-ccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            78999999999999999999999999999876322 11111  11111 246778899999999988877643     89


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc--------------
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG--------------  161 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~--------------  161 (280)
                      |+|||+|+....      ....+.....+.+|+.+..++++++...-    -.+++++||......              
T Consensus        76 d~VihlAa~~~~------~~~~~~~~~~~~~N~~~t~~ll~~~~~~~----i~~~i~~SS~~vyg~~~~~~~~~~~~e~~  145 (347)
T d1z45a2          76 DSVIHFAGLKAV------GESTQIPLRYYHNNILGTVVLLELMQQYN----VSKFVFSSSATVYGDATRFPNMIPIPEEC  145 (347)
T ss_dssp             CEEEECCSCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHHHT----CCEEEEEEEGGGGCCGGGSTTCCSBCTTS
T ss_pred             CEEEEccccccc------cccccCcccccccchhhhHHHHHHHHhcc----cceEEeecceeeecCcccCCCCCcccccc
Confidence            999999987532      12334457788999999999999987542    348999999665421              


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeecccc
Q 023613          162 -GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLA  206 (280)
Q Consensus       162 -~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~  206 (280)
                       ..+...|+.+|.+.+.+++.+.... ..++.+..+.|+.+..+..
T Consensus       146 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~~~  190 (347)
T d1z45a2         146 PLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHP  190 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCT
T ss_pred             CCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEeecC
Confidence             1134679999999999998887653 3468888888888776543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.70  E-value=4.7e-17  Score=140.47  Aligned_cols=226  Identities=13%  Similarity=0.089  Sum_probs=145.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc---chHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD---NLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      -|.||||||+|.||++++++|.+.|+.|.++.++.   .......+.+. ..++.++.+|+.|.+.+..+++       .
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh-cCCeEEEEccCCCHHHHHHHHh-------h
Confidence            47799999999999999999999998755544321   11000111111 2578899999999988877654       7


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-------------
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-------------  161 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------------  161 (280)
                      .|.++|.|+....      ....++..+.+++|+.+..++++.+...-     .+++++||......             
T Consensus        74 ~~~v~~~a~~~~~------~~~~~~~~~~~~~N~~g~~nll~~~~~~~-----~k~i~~ss~~vyg~~~~~~~~~~~~~~  142 (346)
T d1oc2a_          74 ADAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKYD-----IRFHHVSTDEVYGDLPLREDLPGHGEG  142 (346)
T ss_dssp             CSEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             hhhhhhhhhcccc------cchhhCcccceeeehHhHHhhhhhhcccc-----ccccccccceEecccCccccccccccC
Confidence            8889999987543      12234456789999999999998876542     46788877654321             


Q ss_pred             ----------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhc
Q 023613          162 ----------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNA  231 (280)
Q Consensus       162 ----------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (280)
                                ..+...|+.+|.+.+.+++.+.+++   ++++..+.|+.+..|...........................
T Consensus       143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g  219 (346)
T d1oc2a_         143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEG  219 (346)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTS
T ss_pred             cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCC
Confidence                      1123579999999999999988774   799999999999887532211110000000000000000111


Q ss_pred             cCCCCCCCHHHHHHHHHHhcCCCCCCeeecEEEeCCc
Q 023613          232 NMQGTELTANDVANAVLFLASDEARYISGTNLMVDGG  268 (280)
Q Consensus       232 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG  268 (280)
                      .....++..+|+|++++.++....   .|..+.+.+|
T Consensus       220 ~~~r~~i~v~D~a~a~~~~~~~~~---~~~~~~~~~~  253 (346)
T d1oc2a_         220 KNVRDWIHTNDHSTGVWAILTKGR---MGETYLIGAD  253 (346)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHHCC---TTCEEEECCS
T ss_pred             CccccccchhhHHHHHHHHHhhcc---cCcccccccc
Confidence            112357899999999998875432   3444444443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=1.4e-15  Score=129.09  Aligned_cols=198  Identities=13%  Similarity=0.044  Sum_probs=138.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      .|+||||||+|.||++|+++|+++|+.|+++++..+                   +|+.+.+.+..+++.-     ++|.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-------------------~~~~~~~~~~~~~~~~-----~~d~   57 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------------------LNLLDSRAVHDFFASE-----RIDQ   57 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh-------------------ccccCHHHHHHHHhhc-----CCCE
Confidence            578999999999999999999999999887654322                   5899999888776632     8999


Q ss_pred             EEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC--------------
Q 023613           98 MVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL--------------  163 (280)
Q Consensus        98 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~--------------  163 (280)
                      ++|+|+....     ......+..+.+++|+.++.++++++...    +-.++|++||.+...+..              
T Consensus        58 v~~~a~~~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          58 VYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             EEECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             EEEcchhccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            9999976532     11234445677889999999999988663    335899999988643211              


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhh--HHHHHhhh-------cc
Q 023613          164 --GPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVG--FRNFVARN-------AN  232 (280)
Q Consensus       164 --~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~  232 (280)
                        ....|+.+|.+.+.+++.+.++.   |+++..+.|+.+..|..................  ........       ..
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  205 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT  205 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCc
Confidence              12469999999999999998875   789999999999988654332221111000000  00000000       01


Q ss_pred             CCCCCCCHHHHHHHHHHhc
Q 023613          233 MQGTELTANDVANAVLFLA  251 (280)
Q Consensus       233 ~~~~~~~~~dva~~~~~L~  251 (280)
                      ....++.++|+++++..++
T Consensus       206 ~~~~~~~v~d~~~~~~~~~  224 (315)
T d1e6ua_         206 PMREFLHVDDMAAASIHVM  224 (315)
T ss_dssp             CEECEEEHHHHHHHHHHHH
T ss_pred             eEEEEEEeehhHHHHHHhh
Confidence            1245678899999998876

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.65  E-value=2.7e-15  Score=121.87  Aligned_cols=220  Identities=11%  Similarity=0.025  Sum_probs=140.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCe--EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAK--VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++||||||+|.||++++++|+++|+.  |+...|+++.....    .  ..+.++.+|+.+.+++.++++       ++|
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~~-------~~d   70 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----G--GEADVFIGDITDADSINPAFQ-------GID   70 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----T--CCTTEEECCTTSHHHHHHHHT-------TCS
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc----c--CCcEEEEeeeccccccccccc-------cce
Confidence            78999999999999999999999976  55567776544322    2  356788999999998776654       899


Q ss_pred             EEEECCCCCCCCCC-------CCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccch
Q 023613           97 IMVNNAGISGAPCP-------DIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYT  169 (280)
Q Consensus        97 ~li~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~  169 (280)
                      .+||+++.......       .........+.....+|+.+...+........    .+...+.++.....+......+.
T Consensus        71 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~~~~~~  146 (252)
T d2q46a1          71 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG----VKHIVVVGSMGGTNPDHPLNKLG  146 (252)
T ss_dssp             EEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT----CSEEEEEEETTTTCTTCGGGGGG
T ss_pred             eeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc----ccccccccccccCCCCccccccc
Confidence            99999987542100       11122223455666788888888777665543    35777777766555544333333


Q ss_pred             hhH-HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHH
Q 023613          170 GSK-HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVL  248 (280)
Q Consensus       170 ~sK-~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  248 (280)
                      .++ .........+..+   .|+++..++|+.+..+.............           ........+++++|+|++++
T Consensus       147 ~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-----------~~~~~~~~~i~~~Dva~a~~  212 (252)
T d2q46a1         147 NGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGKDD-----------ELLQTDTKTVPRADVAEVCI  212 (252)
T ss_dssp             GCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEESTT-----------GGGGSSCCEEEHHHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhccCc-----------ccccCCCCeEEHHHHHHHHH
Confidence            333 2222223333333   57899999999998775332111000000           00011145788999999999


Q ss_pred             HhcCCCCCCeeecEEEeCCcccc
Q 023613          249 FLASDEARYISGTNLMVDGGFTS  271 (280)
Q Consensus       249 ~L~s~~~~~~~G~~i~~dgG~~~  271 (280)
                      .++..+  ...|+.+++.++...
T Consensus       213 ~~l~~~--~~~g~~~~i~~~~~~  233 (252)
T d2q46a1         213 QALLFE--EAKNKAFDLGSKPEG  233 (252)
T ss_dssp             HHTTCG--GGTTEEEEEEECCTT
T ss_pred             HHhCCc--cccCcEEEEeeCCCC
Confidence            988543  357889998765443

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.65  E-value=1.8e-14  Score=125.65  Aligned_cols=175  Identities=20%  Similarity=0.205  Sum_probs=127.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEec---------CcchHHHHHHH---hC------CCCCeEEEecCCCCH
Q 023613           18 GRVALITGGATGIGESTVRLFHK-HGAKVCIADV---------QDNLGQQVCQS---LG------GEPDTFFCHCDVTKE   78 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~-~g~~V~~~~r---------~~~~~~~~~~~---~~------~~~~~~~~~~D~~~~   78 (280)
                      +..||||||+|.||++++++|++ .|++|+++++         ..+..+.....   ..      ....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            44699999999999999999986 6899999864         11222222111   11      113577889999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           79 EDVCSAVDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        79 ~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      +.++++++..    .++|+|||.|+....      ....+.....+++|+.+...+++++...    +..++++.++...
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~------~~~~~~~~~~~~~N~~~t~~~l~~~~~~----~~~~~~~~~s~~~  147 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAV------GESVRDPLKYYDNNVVGILRLLQAMLLH----KCDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGG
T ss_pred             HHhhhhhhcc----ceeehhhcccccccc------cccccccccccccccccccccchhhhcc----CCccccccccccc
Confidence            9887777643    578999999987543      1234456778899999999998887753    3356777766554


Q ss_pred             ccc------------------CCCCccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccC
Q 023613          159 AIG------------------GLGPHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAH  209 (280)
Q Consensus       159 ~~~------------------~~~~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~  209 (280)
                      ...                  ..+...|+.+|.+.+.+++.+...   +|+.+.++.|+.+..+.....
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~~~  213 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHEDGD  213 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTTSS
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCcccc
Confidence            321                  123578999999999999998777   478999999999988875543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.1e-15  Score=122.86  Aligned_cols=199  Identities=15%  Similarity=0.097  Sum_probs=133.2

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.+++|++|||||+|.||++++++|.++|.  +|++..|++.......     ...+....+|+.+.+++       .+.
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----~~~i~~~~~D~~~~~~~-------~~~   77 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDY-------ASA   77 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGG-------GGG
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----cceeeeeeecccccccc-------ccc
Confidence            346789999999999999999999999995  7999999764322110     13556667888775543       334


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                      +.+.|++||++|...         .........++|+.++..+.+.+..    .+-.++|++|+......  ....|..+
T Consensus        78 ~~~~d~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~~--~~~~Y~~~  142 (232)
T d2bkaa1          78 FQGHDVGFCCLGTTR---------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS--SNFLYLQV  142 (232)
T ss_dssp             GSSCSEEEECCCCCH---------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHH
T ss_pred             ccccccccccccccc---------cccchhhhhhhcccccceeeecccc----cCccccccCCccccccC--ccchhHHH
Confidence            458999999998642         2334566788899999998888765    34468999998876543  34579999


Q ss_pred             HHHHHHHHHHHHHHHCCCCe-EEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhh--ccCCCCCCCHHHHHHHHH
Q 023613          172 KHAVLGLNKNVAAELGKYGI-RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARN--ANMQGTELTANDVANAVL  248 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi-~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~  248 (280)
                      |...+...+.       .|. ++..+.||.+..+....... . ..      ...++...  .......++++|+|++++
T Consensus       143 K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~~-~-~~------~~~~~~~~~~~~~~~~~I~~~dvA~a~i  207 (232)
T d2bkaa1         143 KGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRPG-E-WL------VRKFFGSLPDSWASGHSVPVVTVVRAML  207 (232)
T ss_dssp             HHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSHH-H-HH------HHHHHCSCCTTGGGGTEEEHHHHHHHHH
T ss_pred             HHHhhhcccc-------ccccceEEecCceeecCCCcCcHH-H-HH------HHHHhhccCCcccCCCeEEHHHHHHHHH
Confidence            9887765533       233 46778999998875332111 0 00      01111100  001134578899999988


Q ss_pred             HhcCCC
Q 023613          249 FLASDE  254 (280)
Q Consensus       249 ~L~s~~  254 (280)
                      .++...
T Consensus       208 ~~~~~~  213 (232)
T d2bkaa1         208 NNVVRP  213 (232)
T ss_dssp             HHHTSC
T ss_pred             HHHhcC
Confidence            877543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.38  E-value=7.9e-13  Score=105.64  Aligned_cols=188  Identities=15%  Similarity=0.114  Sum_probs=119.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|++|||||+|.||++++++|.++|+  +|+...|+...         ...++   ..+..|..++   .+   ...+.+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------~~~~~---~~~~~d~~~~---~~---~~~~~~   63 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRL---DNPVGPLAEL---LP---QLDGSI   63 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTE---ECCBSCHHHH---GG---GCCSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------hcccc---cccccchhhh---hh---ccccch
Confidence            58999999999999999999999997  56666665421         11222   3344444332   11   223579


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhHHHH
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSKHAV  175 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~al  175 (280)
                      |.+|+++|....        ....-+...++|+.++..+++.+..    .+-.+++++||..+..  .....|..+|...
T Consensus        64 d~vi~~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~  129 (212)
T d2a35a1          64 DTAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA--KSSIFYNRVKGEL  129 (212)
T ss_dssp             SEEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHHHHH
T ss_pred             heeeeeeeeecc--------ccccccccccchhhhhhhccccccc----cccccccccccccccc--ccccchhHHHHHH
Confidence            999999986532        1112356788899999988887754    4446899999876543  3446799999887


Q ss_pred             HHHHHHHHHHHCCCCe-EEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCC--CCCCHHHHHHHHHHhcC
Q 023613          176 LGLNKNVAAELGKYGI-RVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG--TELTANDVANAVLFLAS  252 (280)
Q Consensus       176 ~~~~~~la~e~~~~gi-~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~~~L~s  252 (280)
                      +...+       ..+. +...+.|+.+..+...........  .   ....+      +.+  +.+..+|+|++++.++.
T Consensus       130 E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~--~---~~~~~------~~~~~~~i~v~DvA~ai~~~~~  191 (212)
T d2a35a1         130 EQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEILA--A---PIARI------LPGKYHGIEACDLARALWRLAL  191 (212)
T ss_dssp             HHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGGTT--C---CCC----------CHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhcc-------ccccccceeeCCcceeCCcccccHHHHHH--H---HHhhc------cCCCCcEEEHHHHHHHHHHHHc
Confidence            76543       2333 577889999987653221110000  0   00000      001  23678999999999986


Q ss_pred             CCC
Q 023613          253 DEA  255 (280)
Q Consensus       253 ~~~  255 (280)
                      .+.
T Consensus       192 ~~~  194 (212)
T d2a35a1         192 EEG  194 (212)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            544

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.33  E-value=1.7e-11  Score=101.42  Aligned_cols=193  Identities=18%  Similarity=0.127  Sum_probs=128.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      .+|||||+|.||++++++|.++|++|+.++|++                    +|+.|.++++++++..     ++|+||
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------~D~~d~~~~~~~l~~~-----~~d~vi   57 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------LDITNVLAVNKFFNEK-----KPNVVI   57 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------ccCCCHHHHHHHHHHc-----CCCEEE
Confidence            489999999999999999999999999998853                    5899999988877754     889999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCCCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~~~~Y  168 (280)
                      |+|+....      +......+..+..|+.....+.......     ...+++.||......           ..+...|
T Consensus        58 h~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~  126 (281)
T d1vl0a_          58 NCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAY  126 (281)
T ss_dssp             ECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             eecccccc------ccccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccchhhh
Confidence            99986532      2233445677788888887777766553     235666665443221           2244578


Q ss_pred             hhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhh-----hccCCCCCCCHHHH
Q 023613          169 TGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVAR-----NANMQGTELTANDV  243 (280)
Q Consensus       169 ~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~dv  243 (280)
                      +.+|...+.+++.       .+.+...+.|+.+..+...-       ....   ......+     .......++.++|+
T Consensus       127 ~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~i~v~D~  189 (281)
T d1vl0a_         127 GKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNF-------VKTM---INLGKTHDELKVVHDQVGTPTSTVDL  189 (281)
T ss_dssp             HHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCH-------HHHH---HHHHHHCSEEEEESSCEECCEEHHHH
T ss_pred             hhhhhHHHHHHHH-------hCCCccccceeEEeCCCccc-------ccch---hhhhccCCceeecCCceeccchhhhh
Confidence            8888877665543       24567789999997764211       0000   0111111     01112467899999


Q ss_pred             HHHHHHhcCCCCCCeeecEEEeCCcc
Q 023613          244 ANAVLFLASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       244 a~~~~~L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++++..++....   +| .+++.+|.
T Consensus       190 ~~~~~~~~~~~~---~g-~~~~~~~~  211 (281)
T d1vl0a_         190 ARVVLKVIDEKN---YG-TFHCTCKG  211 (281)
T ss_dssp             HHHHHHHHHHTC---CE-EEECCCBS
T ss_pred             hhhhhhhhhhcc---cC-ceeEeCCC
Confidence            999999985543   34 55554443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.27  E-value=5.1e-11  Score=99.72  Aligned_cols=217  Identities=10%  Similarity=0.016  Sum_probs=120.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHH----HHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQ----QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++||||||+|.||++++++|+++|++|+++.|+.....    .....+. ...+.++.+|+.+.+++.+.++       
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~-~~~v~~v~~d~~d~~~~~~~~~-------   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALK-------   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc-cCCcEEEEeecccchhhhhhcc-------
Confidence            345999999999999999999999999999999753211    1111222 2457889999999988766555       


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCC-CCccchhhH
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGL-GPHAYTGSK  172 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~-~~~~Y~~sK  172 (280)
                      +.+.++++++....                 ..|......++.++..    ....++++.||.......+ ....+...+
T Consensus        75 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~a~~----~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~  133 (312)
T d1qyda_          75 QVDVVISALAGGVL-----------------SHHILEQLKLVEAIKE----AGNIKRFLPSEFGMDPDIMEHALQPGSIT  133 (312)
T ss_dssp             TCSEEEECCCCSSS-----------------STTTTTHHHHHHHHHH----SCCCSEEECSCCSSCTTSCCCCCSSTTHH
T ss_pred             Ccchhhhhhhhccc-----------------ccchhhhhHHHHHHHH----hcCCcEEEEeeccccCCCcccccchhhhh
Confidence            78889988865322                 1233333444444433    3345677777654332221 112233333


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhcC
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLAS  252 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s  252 (280)
                      .........+..+   .++....+.|+.+..+.....................+  ........++.++|+|++++.++.
T Consensus       134 ~~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~i~v~Dva~a~~~~l~  208 (312)
T d1qyda_         134 FIDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIY--GDGNVKGIWVDEDDVGTYTIKSID  208 (312)
T ss_dssp             HHHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCB--TTSCSEEEEECHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccc--cccccccceeeHHHHHHHHHHHhc
Confidence            3333333333333   46778888999887654322111000000000000000  000111347899999999999885


Q ss_pred             CCCCCeeecEEEeCCcc
Q 023613          253 DEARYISGTNLMVDGGF  269 (280)
Q Consensus       253 ~~~~~~~G~~i~~dgG~  269 (280)
                      .. ...++..+.+.++.
T Consensus       209 ~~-~~~~~~~~~~~~~~  224 (312)
T d1qyda_         209 DP-QTLNKTMYIRPPMN  224 (312)
T ss_dssp             CG-GGSSSEEECCCGGG
T ss_pred             Cc-cccCceEEEeCCCc
Confidence            42 22333344555554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.21  E-value=3.1e-11  Score=103.47  Aligned_cols=212  Identities=13%  Similarity=0.023  Sum_probs=124.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +.|+++||||+|.||++++++|.+.|++|+++.|+.......  .+.....+.++.+|+.|..++.   +   ..+...|
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~~~~~v~~~~gD~~d~~~~~---~---~a~~~~~   73 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQAIPNVTLFQGPLLNNVPLM---D---TLFEGAH   73 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHHTSTTEEEEESCCTTCHHHH---H---HHHTTCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhcccCCCEEEEeeCCCcHHHH---H---HHhcCCc
Confidence            579999999999999999999999999999999987654432  2222346788999999865532   2   2235788


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC--CCCccchhhHHH
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG--LGPHAYTGSKHA  174 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~--~~~~~Y~~sK~a  174 (280)
                      .++.+......                  .++....+++.++..    .+..++++.||.......  .....|..+|..
T Consensus        74 ~~~~~~~~~~~------------------~~~~~~~~~~~aa~~----agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~  131 (350)
T d1xgka_          74 LAFINTTSQAG------------------DEIAIGKDLADAAKR----AGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFT  131 (350)
T ss_dssp             EEEECCCSTTS------------------CHHHHHHHHHHHHHH----HSCCSEEEEEECCCGGGTSSCCCCTTTHHHHH
T ss_pred             eEEeecccccc------------------hhhhhhhHHHHHHHH----hCCCceEEEeeccccccCCcccchhhhhhHHH
Confidence            88777543211                  122233344555433    334567778876554433  234566677766


Q ss_pred             HHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCC----CCCC-HHHHHHHHHH
Q 023613          175 VLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQG----TELT-ANDVANAVLF  249 (280)
Q Consensus       175 l~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~dva~~~~~  249 (280)
                      .+.+.+.       .++....+.|+.+.........+....... ......+   ..+..+    .+++ .+|+++++..
T Consensus       132 ~~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~i~~~~Dva~~v~~  200 (350)
T d1xgka_         132 VENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELM-PDGTFEW---HAPFDPDIPLPWLDAEHDVGPALLQ  200 (350)
T ss_dssp             HHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEEC-TTSCEEE---EESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHh-------hccCceeeeeceeecccccccccccccccc-cccccee---eecccCCCcceEEEeHHHHHHHHHH
Confidence            6554332       346777888888766543222211100000 0000000   000001    1233 4789999988


Q ss_pred             hcCCCCCCeeecEEEeCCcc
Q 023613          250 LASDEARYISGTNLMVDGGF  269 (280)
Q Consensus       250 L~s~~~~~~~G~~i~~dgG~  269 (280)
                      ++.+......|+.+.+.|..
T Consensus       201 ~l~~~~~~~~G~~~~~~g~~  220 (350)
T d1xgka_         201 IFKDGPQKWNGHRIALTFET  220 (350)
T ss_dssp             HHHHCHHHHTTCEEEECSEE
T ss_pred             HHhCChhhcCCeEEEEeCCc
Confidence            87543344578888887653

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.21  E-value=3.3e-11  Score=100.32  Aligned_cols=213  Identities=11%  Similarity=0.068  Sum_probs=122.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHH-----HHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQ-----VCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      +.|+||||||+|.||++++++|.+.|++|+++.|+......     ..+.+. ...+.++.+|+.+.++..+.++     
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhh-----
Confidence            36789999999999999999999999999999987543211     111121 2457788999999988776665     


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhh
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGS  171 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  171 (280)
                        ..+.++++++....                     .+...+.+++..    ....++++.||............+...
T Consensus        76 --~~~~vi~~~~~~~~---------------------~~~~~~~~a~~~----~~~~~~~~~s~~~~~~~~~~~~~~~~~  128 (307)
T d1qyca_          76 --NVDVVISTVGSLQI---------------------ESQVNIIKAIKE----VGTVKRFFPSEFGNDVDNVHAVEPAKS  128 (307)
T ss_dssp             --TCSEEEECCCGGGS---------------------GGGHHHHHHHHH----HCCCSEEECSCCSSCTTSCCCCTTHHH
T ss_pred             --hceeeeeccccccc---------------------chhhHHHHHHHH----hccccceeeeccccccccccccccccc
Confidence              78899998865321                     122233333333    233467777765444333333344444


Q ss_pred             HHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhhhhhhhhhHHHHHhhhccCCCCCCCHHHHHHHHHHhc
Q 023613          172 KHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEERTEDAMVGFRNFVARNANMQGTELTANDVANAVLFLA  251 (280)
Q Consensus       172 K~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~  251 (280)
                      +............+   .++....+.|+.+..+..............   ...............++.++|+|++++.++
T Consensus       129 ~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l  202 (307)
T d1qyca_         129 VFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPP---RDKVVILGDGNARVVFVKEEDIGTFTIKAV  202 (307)
T ss_dssp             HHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCC---SSEEEEETTSCCEEEEECHHHHHHHHHTTS
T ss_pred             cccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhh---cccceeeecccccccCCcHHHHHHHHHHHh
Confidence            44333333333333   467788899999877653321110000000   000000000011134789999999999998


Q ss_pred             CCCCCCeeecEEEeCCcc
Q 023613          252 SDEARYISGTNLMVDGGF  269 (280)
Q Consensus       252 s~~~~~~~G~~i~~dgG~  269 (280)
                      .... ..++..+.+.+|.
T Consensus       203 ~~~~-~~~~~~~~~~~~~  219 (307)
T d1qyca_         203 DDPR-TLNKTLYLRLPAN  219 (307)
T ss_dssp             SCGG-GTTEEEECCCGGG
T ss_pred             cChh-hcCceeEEeCCCC
Confidence            6432 2233344444444

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.17  E-value=7.4e-11  Score=98.14  Aligned_cols=129  Identities=20%  Similarity=0.126  Sum_probs=92.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      .+|||||+|.||+++++.|.+.|..|.+ ++....                +.+|+++.+.++++++..     ++|+||
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~----------------~~~Dl~~~~~~~~~i~~~-----~~D~Vi   59 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE----------------FCGDFSNPKGVAETVRKL-----RPDVIV   59 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS----------------SCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc----------------ccCcCCCHHHHHHHHHHc-----CCCEEE
Confidence            4899999999999999999999865544 443321                236999999998888755     799999


Q ss_pred             ECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC-----------CCCccc
Q 023613          100 NNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG-----------LGPHAY  168 (280)
Q Consensus       100 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  168 (280)
                      |+||....  .    .+.+.-...+++|+.+...+.+++..     ...+++++||.....+.           .+...|
T Consensus        60 h~Aa~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y  128 (298)
T d1n2sa_          60 NAAAHTAV--D----KAESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (298)
T ss_dssp             ECCCCCCH--H----HHTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             Eecccccc--c----ccccCccccccccccccccchhhhhc-----cccccccccccccccCCCCCCCccccccCCCchH
Confidence            99997642  1    12233467889999999888887642     34578888776554321           134679


Q ss_pred             hhhHHHHHHHHHH
Q 023613          169 TGSKHAVLGLNKN  181 (280)
Q Consensus       169 ~~sK~al~~~~~~  181 (280)
                      +.+|.+.+.+.+.
T Consensus       129 ~~~k~~~e~~~~~  141 (298)
T d1n2sa_         129 GKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhHHh
Confidence            9999887765543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.10  E-value=8e-10  Score=92.01  Aligned_cols=218  Identities=15%  Similarity=0.119  Sum_probs=127.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH--HcCCc
Q 023613           21 ALITGGATGIGESTVRLFHKHGA-KVCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE--KFGTL   95 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~~~   95 (280)
                      ||||||+|.||+++++.|+++|+ .|+++++-..  .....   ...      ..+|..+.+..   ......  .+..+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~---~~~------~~~~~~~~~~~---~~~~~~~~~~~~~   69 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL---VDL------NIADYMDKEDF---LIQIMAGEEFGDV   69 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH---HTS------CCSEEEEHHHH---HHHHHTTCCCSSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc---ccc------chhhhccchHH---HHHHhhhhcccch
Confidence            79999999999999999999996 5777753222  11111   111      11233333332   333332  23578


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccccc-----------CCC
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIG-----------GLG  164 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-----------~~~  164 (280)
                      ++++|.|+....     ...   ..+...+.|+.+...+++.+...-     -++++.||.....+           ..+
T Consensus        70 ~~i~~~aa~~~~-----~~~---~~~~~~~~~~~~~~~~l~~~~~~~-----i~~v~~ss~~~~~~~~~~~~~~~~~~~~  136 (307)
T d1eq2a_          70 EAIFHEGACSST-----TEW---DGKYMMDNNYQYSKELLHYCLERE-----IPFLYASSAATYGGRTSDFIESREYEKP  136 (307)
T ss_dssp             CEEEECCSCCCT-----TCC---CHHHHHHHTHHHHHHHHHHHHHHT-----CCEEEEEEGGGGTTCCSCBCSSGGGCCC
T ss_pred             hhhhhhcccccc-----ccc---cccccccccccccccccccccccc-----cccccccccccccccccccccccccccc
Confidence            899999875432     112   345567778888888877766542     23565555554332           224


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccccccCCCchhh---hhhhh-hhHHHHH-hhhccCCCCCCC
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGLALAHLPEEER---TEDAM-VGFRNFV-ARNANMQGTELT  239 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~~~~~~~~~~~---~~~~~-~~~~~~~-~~~~~~~~~~~~  239 (280)
                      ...|+.+|.+.+.+++.+..+   .++.+..+.|..+..+...........   ..... ....... .........++.
T Consensus       137 ~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~  213 (307)
T d1eq2a_         137 LNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY  213 (307)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEE
T ss_pred             ccccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeee
Confidence            578999999999998887555   578899999999888754322110000   00000 0000000 011111246788


Q ss_pred             HHHHHHHHHHhcCCCCCCeeecEEEeCCccc
Q 023613          240 ANDVANAVLFLASDEARYISGTNLMVDGGFT  270 (280)
Q Consensus       240 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~  270 (280)
                      ++|+++++..++....    ...+++.+|..
T Consensus       214 v~d~~~~~~~~~~~~~----~~~~~~~~~~~  240 (307)
T d1eq2a_         214 VGDVADVNLWFLENGV----SGIFNLGTGRA  240 (307)
T ss_dssp             HHHHHHHHHHHHHHCC----CEEEEESCSCC
T ss_pred             cccHHHHHHHHhhhcc----ccccccccccc
Confidence            9999999998886432    24566666543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.97  E-value=2e-14  Score=113.55  Aligned_cols=170  Identities=6%  Similarity=-0.022  Sum_probs=90.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC---CCeE------------EEecCCCCHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE---PDTF------------FCHCDVTKEEDVCSA   84 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~------------~~~~D~~~~~~~~~~   84 (280)
                      ++.|+||+|++|+++|+.|+++|++|++.+|++++++++.+++...   ....            ...........+.. 
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   80 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDT-   80 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHH-
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchH-
Confidence            3678888899999999999999999999999999888887766421   1111            11111221222221 


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCC
Q 023613           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLG  164 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~  164 (280)
                      .......................               ....++.....+.+...+.+........+++.+.....+...
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (212)
T d1jaya_          81 ARDLKNILREKIVVSPLVPVSRG---------------AKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDE  145 (212)
T ss_dssp             HHHTHHHHTTSEEEECCCCEECC---------------TTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTC
T ss_pred             HHHhhhhhccccccccccccccc---------------cccccccccchhhhhhhhhhhhhcccccceeecHHHhcCccc
Confidence            11111111111111111111110               001111111111122222333333233333444444444455


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCCCCeEEEEEeCCeeeccc
Q 023613          165 PHAYTGSKHAVLGLNKNVAAELGKYGIRVNCVSPYAVATGL  205 (280)
Q Consensus       165 ~~~Y~~sK~al~~~~~~la~e~~~~gi~v~~v~pg~v~T~~  205 (280)
                      ...|...+++.....+..+.++....+.++.+.||.+++..
T Consensus       146 ~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a~  186 (212)
T d1jaya_         146 KFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSR  186 (212)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHH
T ss_pred             ccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHHH
Confidence            56777777777788888877777667788899999886543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.22  E-value=3.1e-06  Score=64.45  Aligned_cols=105  Identities=16%  Similarity=0.132  Sum_probs=69.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH-cCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK-FGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~   95 (280)
                      +|.++||+||+||+|...++.....|++|+.+.+++++.+.. +.+..  +. ++  |-.+.  ..   +.+... -+++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~-~~lGa--~~-vi--~~~~~--~~---~~~~~~~~~gv   99 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGA--KE-VL--AREDV--MA---ERIRPLDKQRW   99 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTC--SE-EE--ECC--------------CCSCCE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH-Hhccc--ce-ee--ecchh--HH---HHHHHhhccCc
Confidence            589999999999999999998888999999999998876654 34432  22 22  22211  11   111121 2489


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccC
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGG  162 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~  162 (280)
                      |+++.+.|...                            ++..+..+.  .+||++.++...+..+.
T Consensus       100 D~vid~vgg~~----------------------------~~~~l~~l~--~~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2         100 AAAVDPVGGRT----------------------------LATVLSRMR--YGGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             EEEEECSTTTT----------------------------HHHHHHTEE--EEEEEEECSCCSSSCCC
T ss_pred             CEEEEcCCchh----------------------------HHHHHHHhC--CCceEEEeecccCcccC
Confidence            99999998431                            233455553  36999999887665543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.12  E-value=7.4e-06  Score=62.71  Aligned_cols=85  Identities=15%  Similarity=0.250  Sum_probs=63.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHH---HHHhCCCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQV---CQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .++++|+++|.|+ ||.|++++..|++.|.+ ++++.|+.+..++.   ++.+..........+|+.+.+++.....   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---
Confidence            3688999999999 69999999999999985 88899987655543   3333333344455688888877654443   


Q ss_pred             HHcCCccEEEECCCCCC
Q 023613           90 EKFGTLDIMVNNAGISG  106 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~  106 (280)
                          ..|++||+.....
T Consensus        90 ----~~diiIN~Tp~G~  102 (182)
T d1vi2a1          90 ----SADILTNGTKVGM  102 (182)
T ss_dssp             ----TCSEEEECSSTTS
T ss_pred             ----ccceeccccCCcc
Confidence                8899999987643

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.09  E-value=1.8e-05  Score=59.58  Aligned_cols=82  Identities=20%  Similarity=0.203  Sum_probs=56.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~   95 (280)
                      .|.+++|+| +|++|...++.+...|++|+++++++++++...+ +..  ... +..|-. .++.....+.+.+.. +++
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~ga--~~~-~~~~~~-~~~~~~~~~~~~~~~g~g~   99 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGA--DVT-LVVDPA-KEEESSIIERIRSAIGDLP   99 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTC--SEE-EECCTT-TSCHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cCC--cEE-Eecccc-ccccchhhhhhhcccccCC
Confidence            588999997 5799999998888889999999999988765533 332  222 222222 222334455666555 479


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|.++|.
T Consensus       100 D~vid~~g~  108 (170)
T d1e3ja2         100 NVTIDCSGN  108 (170)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeecCCC
Confidence            999999974

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.05  E-value=1.3e-05  Score=60.56  Aligned_cols=75  Identities=15%  Similarity=0.205  Sum_probs=56.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      ++|.++|.|| |.+|+.+|+.|+++|++|++.+|+.++.+.+.+...   .......+..+.......+.       ..|
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~---~~~~~~~~~~~~~~~~~~i~-------~~~   69 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ---HSTPISLDVNDDAALDAEVA-------KHD   69 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT---TEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc---ccccccccccchhhhHhhhh-------ccc
Confidence            3689999987 999999999999999999999999998888766443   34444556666555544433       667


Q ss_pred             EEEECC
Q 023613           97 IMVNNA  102 (280)
Q Consensus        97 ~li~~a  102 (280)
                      .++...
T Consensus        70 ~~i~~~   75 (182)
T d1e5qa1          70 LVISLI   75 (182)
T ss_dssp             EEEECS
T ss_pred             eeEeec
Confidence            776554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.04  E-value=1.8e-05  Score=59.07  Aligned_cols=75  Identities=17%  Similarity=0.387  Sum_probs=57.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++++|.+||.|+ |++|+.+++.|...|++ +.++.|+.++.+++.+.+...    .  .++   +++...+       
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~----~--~~~---~~~~~~l-------   82 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE----A--VRF---DELVDHL-------   82 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE----E--CCG---GGHHHHH-------
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc----c--ccc---hhHHHHh-------
Confidence            3689999999998 99999999999999985 889999999888888876521    1  122   2222222       


Q ss_pred             CCccEEEECCCCC
Q 023613           93 GTLDIMVNNAGIS  105 (280)
Q Consensus        93 ~~~d~li~~ag~~  105 (280)
                      ...|++|++.+..
T Consensus        83 ~~~Divi~atss~   95 (159)
T d1gpja2          83 ARSDVVVSATAAP   95 (159)
T ss_dssp             HTCSEEEECCSSS
T ss_pred             ccCCEEEEecCCC
Confidence            3899999998754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.99  E-value=1.4e-05  Score=61.09  Aligned_cols=104  Identities=20%  Similarity=0.200  Sum_probs=68.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +|.++||+||++++|...++.....|++|+.+.+++++.+.. +.+.  .+..+..-|-...+.   ..+..  ..+++|
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~-~~~G--a~~vi~~~~~~~~~~---~~~~~--~~~Gvd  100 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIG--FDAAFNYKTVNSLEE---ALKKA--SPDGYD  100 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--CSEEEETTSCSCHHH---HHHHH--CTTCEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH-Hhhh--hhhhcccccccHHHH---HHHHh--hcCCCc
Confidence            599999999999999999999999999999999988765544 3333  232332223222222   22222  124799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccc
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAG  158 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~  158 (280)
                      +++++.|.-                            ..+..++.+  +.+|+++.++....
T Consensus       101 ~v~D~vG~~----------------------------~~~~~~~~l--~~~G~~v~~G~~~~  132 (182)
T d1v3va2         101 CYFDNVGGE----------------------------FLNTVLSQM--KDFGKIAICGAISV  132 (182)
T ss_dssp             EEEESSCHH----------------------------HHHHHGGGE--EEEEEEEECCCGGG
T ss_pred             eeEEecCch----------------------------hhhhhhhhc--cCCCeEEeecceee
Confidence            999999721                            123455555  34689998876544

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.94  E-value=1.6e-05  Score=60.08  Aligned_cols=78  Identities=12%  Similarity=0.087  Sum_probs=59.4

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++||.+||.|+ ||.+++++..|.+.|.+|.++.|+.++.+++.+.+.....+..+..|  +.            ...
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~--~~------------~~~   78 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD--EL------------EGH   78 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG--GG------------TTC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccc--cc------------ccc
Confidence            3578999999997 78899999999999999999999999998888877644443333222  11            114


Q ss_pred             CccEEEECCCCCC
Q 023613           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~~d~li~~ag~~~  106 (280)
                      ..|++||+.....
T Consensus        79 ~~dliIN~Tp~G~   91 (170)
T d1nyta1          79 EFDLIINATSSGI   91 (170)
T ss_dssp             CCSEEEECCSCGG
T ss_pred             ccceeecccccCc
Confidence            7899999987653

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=9.6e-06  Score=61.49  Aligned_cols=77  Identities=16%  Similarity=0.237  Sum_probs=55.2

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      +|+++||+||++++|...++.....|++|+++.+++++.+.+ +++..  +. +  .|..+.+-    .+++++..  .+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~Ga--~~-v--i~~~~~~~----~~~i~~~t~~~g   97 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNGA--HE-V--FNHREVNY----IDKIKKYVGEKG   97 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTC--SE-E--EETTSTTH----HHHHHHHHCTTC
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-cccCc--cc-c--cccccccH----HHHhhhhhccCC
Confidence            589999999999999999998888899999999887765544 44442  22 2  25555433    33444433  36


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      +|+++.+.|
T Consensus        98 ~d~v~d~~g  106 (174)
T d1yb5a2          98 IDIIIEMLA  106 (174)
T ss_dssp             EEEEEESCH
T ss_pred             ceEEeeccc
Confidence            999999886

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=1.3e-05  Score=60.97  Aligned_cols=78  Identities=17%  Similarity=0.119  Sum_probs=57.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      .|+++||+||++++|...++.....|++|+.+++++++.+... ++..  + .+  .|..+++-    .+++++..  .+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa--~-~v--i~~~~~d~----~~~v~~~t~g~g   97 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGA--W-QV--INYREEDL----VERLKEITGGKK   97 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTC--S-EE--EETTTSCH----HHHHHHHTTTCC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCC--e-EE--EECCCCCH----HHHHHHHhCCCC
Confidence            4899999999999999999998889999999999998876654 3442  2 22  25555433    33344432  36


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|+++.+.|.
T Consensus        98 ~d~v~d~~g~  107 (179)
T d1qora2          98 VRVVYDSVGR  107 (179)
T ss_dssp             EEEEEECSCG
T ss_pred             eEEEEeCccH
Confidence            8999998873

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.82  E-value=4.9e-05  Score=57.36  Aligned_cols=78  Identities=12%  Similarity=0.109  Sum_probs=60.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++++|.++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+.+.+.++....+.....|-.+              ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~--------------~~   78 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP--------------LQ   78 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC--------------CS
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcccc--------------cc
Confidence            3578999999987 67799999999998888999999999999988888755555555544221              24


Q ss_pred             CccEEEECCCCCC
Q 023613           94 TLDIMVNNAGISG  106 (280)
Q Consensus        94 ~~d~li~~ag~~~  106 (280)
                      ..|++||+.....
T Consensus        79 ~~diiIN~tp~g~   91 (171)
T d1p77a1          79 TYDLVINATSAGL   91 (171)
T ss_dssp             CCSEEEECCCC--
T ss_pred             ccceeeecccccc
Confidence            7899999987653

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.80  E-value=1.3e-05  Score=61.17  Aligned_cols=77  Identities=21%  Similarity=0.277  Sum_probs=54.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~   94 (280)
                      +|+++||+||+|++|...++.+...|++|+++.+++++.+. +++..  .+. ++  |..+++    +.+++++..  .+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~-l~~~G--a~~-vi--~~~~~~----~~~~v~~~t~~~g   94 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-LSRLG--VEY-VG--DSRSVD----FADEILELTDGYG   94 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHTTC--CSE-EE--ETTCST----HHHHHHHHTTTCC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc-ccccc--ccc-cc--cCCccC----HHHHHHHHhCCCC
Confidence            48999999999999999999888889999999988776543 33333  222 22  334432    234454443  37


Q ss_pred             ccEEEECCC
Q 023613           95 LDIMVNNAG  103 (280)
Q Consensus        95 ~d~li~~ag  103 (280)
                      +|+++.++|
T Consensus        95 ~d~v~d~~g  103 (183)
T d1pqwa_          95 VDVVLNSLA  103 (183)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEeccc
Confidence            999999987

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=0.00024  Score=53.21  Aligned_cols=80  Identities=16%  Similarity=0.324  Sum_probs=56.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   94 (280)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.. +++..  + .++..+-.+..+..   +.+.... .+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~Ga--~-~~~~~~~~~~~~~~---~~~~~~~g~g   97 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGA--D-LVLQISKESPQEIA---RKVEGQLGCK   97 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC--S-EEEECSSCCHHHHH---HHHHHHHTSC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhCC--c-cccccccccccccc---ccccccCCCC
Confidence            4789999987 9999999988888999 699999999887754 44442  2 23334444454443   3333334 37


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.++|.
T Consensus        98 ~Dvvid~~G~  107 (171)
T d1pl8a2          98 PEVTIECTGA  107 (171)
T ss_dssp             CSEEEECSCC
T ss_pred             ceEEEeccCC
Confidence            9999999984

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=4.3e-05  Score=49.38  Aligned_cols=42  Identities=24%  Similarity=0.430  Sum_probs=37.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~   58 (280)
                      +++++||+||++|+|...++.+...|++|+.+.+++++.+-+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            588999999999999999998888899999999988876554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.68  E-value=8.9e-05  Score=53.25  Aligned_cols=72  Identities=15%  Similarity=0.320  Sum_probs=56.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      +++|.|+ |.+|+.+++.|.+.|+.|++++++++..+.+.+..    ...++..|.++++.++++      ...+.|.++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~----~~~vi~Gd~~~~~~l~~~------~i~~a~~vv   70 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLEDA------GIEDADMYI   70 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHHHT------TTTTCSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh----hhhhccCcccchhhhhhc------Chhhhhhhc
Confidence            5788887 99999999999999999999999999888766543    356788999998765432      113677776


Q ss_pred             ECC
Q 023613          100 NNA  102 (280)
Q Consensus       100 ~~a  102 (280)
                      ...
T Consensus        71 ~~t   73 (132)
T d1lssa_          71 AVT   73 (132)
T ss_dssp             ECC
T ss_pred             ccC
Confidence            643

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.66  E-value=0.00017  Score=54.65  Aligned_cols=80  Identities=19%  Similarity=0.211  Sum_probs=55.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      +|.++||+|+ |++|...++.+...|+ +|+++++++++++.. +++..  .. ++...-.+..   ...+++.+..  .
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~-vi~~~~~~~~---~~~~~i~~~~~~~   99 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGA--DL-TLNRRETSVE---ERRKAIMDITHGR   99 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTC--SE-EEETTTSCHH---HHHHHHHHHTTTS
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccccc--eE-EEeccccchH---HHHHHHHHhhCCC
Confidence            5899999997 7999999998888998 699999999887654 44442  22 2322222222   2344444443  2


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus       100 g~Dvvid~vG~  110 (182)
T d1vj0a2         100 GADFILEATGD  110 (182)
T ss_dssp             CEEEEEECSSC
T ss_pred             CceEEeecCCc
Confidence            69999999975

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.60  E-value=2.3e-05  Score=60.15  Aligned_cols=86  Identities=14%  Similarity=0.135  Sum_probs=51.3

Q ss_pred             CCcEEEE-EcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHH-HcC
Q 023613           17 VGRVALI-TGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVE-KFG   93 (280)
Q Consensus        17 ~~k~vlI-tGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   93 (280)
                      +|.+++| +||+|++|.+.++..-..|++|+.+.|+.+..++..+.++.. .+. ++..|-.+..+....+.++.+ ..+
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~-vi~~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ-VITEDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE-EEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccE-EEeccccchhHHHHHHHHHHhhccC
Confidence            3665555 699999999999888888999999888766555443333211 222 222211111122222333333 335


Q ss_pred             CccEEEECCC
Q 023613           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~~d~li~~ag  103 (280)
                      ++|+++++.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999986

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=0.00034  Score=52.22  Aligned_cols=75  Identities=19%  Similarity=0.402  Sum_probs=53.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.+|+|.|+ |++|...++.+...|++++++++++++.+ ..+++..  +. +  .|..+.+...       ...+++|
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~lGa--d~-~--i~~~~~~~~~-------~~~~~~D   95 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGA--DE-V--VNSRNADEMA-------AHLKSFD   95 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTC--SE-E--EETTCHHHHH-------TTTTCEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhccCC--cE-E--EECchhhHHH-------HhcCCCc
Confidence            5899999986 89999998888788999999999888764 4455552  22 2  3555554321       2225899


Q ss_pred             EEEECCCCC
Q 023613           97 IMVNNAGIS  105 (280)
Q Consensus        97 ~li~~ag~~  105 (280)
                      ++|.++|..
T Consensus        96 ~vid~~g~~  104 (168)
T d1uufa2          96 FILNTVAAP  104 (168)
T ss_dssp             EEEECCSSC
T ss_pred             eeeeeeecc
Confidence            999999854

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=0.00011  Score=56.13  Aligned_cols=104  Identities=15%  Similarity=0.152  Sum_probs=63.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEE-EEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +++|||+||+||+|...++..-..|++++ .+.++++....+.+++..  +. ++  |..+++ ..+.++++..  .++|
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga--d~-vi--~~~~~~-~~~~~~~~~~--~GvD  102 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF--DA-AV--NYKTGN-VAEQLREACP--GGVD  102 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC--SE-EE--ETTSSC-HHHHHHHHCT--TCEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc--eE-Ee--eccchh-HHHHHHHHhc--cCce
Confidence            48999999999999999988877898754 567777777766666653  22 22  333332 2222333321  4799


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA  159 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  159 (280)
                      +++.+.|..             .               ++..++.+  +.+|+++.++..++.
T Consensus       103 vv~D~vGg~-------------~---------------~~~~~~~l--~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         103 VYFDNVGGD-------------I---------------SNTVISQM--NENSHIILCGQISQY  135 (187)
T ss_dssp             EEEESSCHH-------------H---------------HHHHHTTE--EEEEEEEEC------
T ss_pred             EEEecCCch-------------h---------------HHHHhhhc--cccccEEEecccccc
Confidence            999999721             1               23345555  346999998765543

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.00024  Score=55.73  Aligned_cols=80  Identities=16%  Similarity=0.157  Sum_probs=55.6

Q ss_pred             cccCCcEEEEEcC----------------CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCC
Q 023613           14 QRLVGRVALITGG----------------ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK   77 (280)
Q Consensus        14 ~~l~~k~vlItGa----------------~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~   77 (280)
                      .+|+||.+|||+|                ||..|.+||+.+..+|++|.++......        .....+..+.  +.+
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~--------~~p~~~~~~~--~~t   71 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL--------PTPPFVKRVD--VMT   71 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC--------CCCTTEEEEE--CCS
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc--------Ccccccccce--ehh
Confidence            5799999999976                3589999999999999999887654321        1112344433  344


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEECCCCCC
Q 023613           78 EEDVCSAVDLTVEKFGTLDIMVNNAGISG  106 (280)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~d~li~~ag~~~  106 (280)
                      .++.   .+.+.+.+...|++|++|.+..
T Consensus        72 ~~~m---~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          72 ALEM---EAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             HHHH---HHHHHHHGGGCSEEEECCBCCS
T ss_pred             hHHH---HHHHHhhhccceeEeeeechhh
Confidence            4444   4444455567899999999864

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.48  E-value=0.00016  Score=54.28  Aligned_cols=75  Identities=19%  Similarity=0.272  Sum_probs=53.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .+|+++||+||+|++|...++.....|++|+.+.+++++.+... ++..  +..+   |..+.      .+++. ...++
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa--~~~i---~~~~~------~~~~~-~~~g~   92 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGA--EEAA---TYAEV------PERAK-AWGGL   92 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTC--SEEE---EGGGH------HHHHH-HTTSE
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cccc--ceee---ehhhh------hhhhh-ccccc
Confidence            36999999999999999999988888999999999887766543 4442  2221   33322      12222 23579


Q ss_pred             cEEEECCC
Q 023613           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |+++.+.|
T Consensus        93 D~v~d~~G  100 (171)
T d1iz0a2          93 DLVLEVRG  100 (171)
T ss_dssp             EEEEECSC
T ss_pred             cccccccc
Confidence            99999766

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.41  E-value=0.0015  Score=47.44  Aligned_cols=112  Identities=14%  Similarity=0.138  Sum_probs=66.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhC----CCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLG----GEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+++.|.|+ |.+|..+|..|++.|  ..|++++++++..+.....+.    ..........|..              
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--------------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--------------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--------------
Confidence            4667888896 999999999999987  469999999876654443332    1223344444431              


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ....-|++|..+|....+        .++-.+.+..|..-.-.+.+.+.++   ...+.+++++
T Consensus        69 ~~~~adivvitag~~~~~--------g~~r~~l~~~N~~i~~~~~~~i~~~---~p~aivivvt  121 (146)
T d1ez4a1          69 DCKDADLVVITAGAPQKP--------GESRLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAA  121 (146)
T ss_dssp             GGTTCSEEEECCCC------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             HhccccEEEEecccccCC--------CCCHHHHHHHHHHHHHHHHHHHhhc---CCCcEEEEeC
Confidence            124789999999975431        1223445566665555555544442   3345555554

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.35  E-value=0.00021  Score=53.41  Aligned_cols=78  Identities=13%  Similarity=0.239  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      .|.+++|.|+++++|...+..+...|+ +|+++++++++++... ++..  + .++  |..+++..    +++++..  +
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga--~-~~i--~~~~~~~~----~~~~~~~~~~   96 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGA--D-YVI--NASMQDPL----AEIRRITESK   96 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTC--S-EEE--ETTTSCHH----HHHHHHTTTS
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCC--c-eee--ccCCcCHH----HHHHHHhhcc
Confidence            588999999999999999999998885 6888998887766554 3432  2 233  23333322    3333332  3


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus        97 ~~d~vid~~g~  107 (170)
T d1jvba2          97 GVDAVIDLNNS  107 (170)
T ss_dssp             CEEEEEESCCC
T ss_pred             cchhhhccccc
Confidence            69999999874

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.29  E-value=0.00019  Score=51.50  Aligned_cols=73  Identities=18%  Similarity=0.265  Sum_probs=53.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |.++|.|+ |-+|+.+++.|.+.|+.|++++.+++..+.+.+    . ....+.+|.++++.+.++      .....|.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~----~-~~~~~~gd~~~~~~l~~a------~i~~a~~v   68 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y-ATHAVIANATEENELLSL------GIRNFEYV   68 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT----T-CSEEEECCTTCTTHHHHH------TGGGCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH----h-CCcceeeecccchhhhcc------CCccccEE
Confidence            56777766 799999999999999999999999987766532    1 234566899988765432      11366777


Q ss_pred             EECCC
Q 023613           99 VNNAG  103 (280)
Q Consensus        99 i~~ag  103 (280)
                      |...+
T Consensus        69 i~~~~   73 (134)
T d2hmva1          69 IVAIG   73 (134)
T ss_dssp             EECCC
T ss_pred             EEEcC
Confidence            76654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.23  E-value=0.00022  Score=53.38  Aligned_cols=101  Identities=20%  Similarity=0.258  Sum_probs=66.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH-c-CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK-F-GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~-~~   94 (280)
                      ++.+|||+||+||+|...++.....|++|+.+.+++++.+.+. .+..  +.. +  |   .++   ...+.... . ++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGa--d~v-i--~---~~~---~~~~~~~~~~~~g   90 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGA--SEV-I--S---RED---VYDGTLKALSKQQ   90 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTC--SEE-E--E---HHH---HCSSCCCSSCCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcc--cce-E--e---ccc---hhchhhhcccCCC
Confidence            4778999999999999999877778999999999988776654 3432  222 1  1   111   11111111 1 47


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcccccc
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGA  159 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~  159 (280)
                      +|++|.+.|..             .               ++..+..+  +..|+++.++...+.
T Consensus        91 vd~vid~vgg~-------------~---------------~~~~~~~l--~~~G~iv~~G~~~g~  125 (167)
T d1tt7a2          91 WQGAVDPVGGK-------------Q---------------LASLLSKI--QYGGSVAVSGLTGGG  125 (167)
T ss_dssp             EEEEEESCCTH-------------H---------------HHHHHTTE--EEEEEEEECCCSSCS
T ss_pred             ceEEEecCcHH-------------H---------------HHHHHHHh--ccCceEEEeeccCCC
Confidence            99999998731             1               23345555  346899998876653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.21  E-value=0.0015  Score=48.80  Aligned_cols=77  Identities=17%  Similarity=0.230  Sum_probs=51.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEE-EEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc-CC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVC-IADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF-GT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   94 (280)
                      .|.+++|.|+ |++|...+..+...|++++ ++++++++++.. +++..   ..++  |..+++ +   .+++++.. ++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~Ga---~~~i--~~~~~~-~---~~~i~~~t~gg   96 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGA---THVI--NSKTQD-P---VAAIKEITDGG   96 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTC---SEEE--ETTTSC-H---HHHHHHHTTSC
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHcCC---eEEE--eCCCcC-H---HHHHHHHcCCC
Confidence            5889999997 8999999988888898755 566777666654 44442   2233  333322 2   33444433 58


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.+.|.
T Consensus        97 ~D~vid~~G~  106 (174)
T d1f8fa2          97 VNFALESTGS  106 (174)
T ss_dssp             EEEEEECSCC
T ss_pred             CcEEEEcCCc
Confidence            9999999985

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.17  E-value=0.00025  Score=53.38  Aligned_cols=77  Identities=12%  Similarity=0.091  Sum_probs=53.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc--C
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF--G   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~   93 (280)
                      +|.+++|.|+ |++|...++.+...|+ +|+++++++++++.. +.+..  . .++  |..+++.    .+.+.+..  .
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lGa--~-~~i--~~~~~~~----~~~v~~~t~g~   95 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYGA--T-DIL--NYKNGHI----EDQVMKLTNGK   95 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHTC--S-EEE--CGGGSCH----HHHHHHHTTTS
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-HhhCc--c-ccc--cccchhH----HHHHHHHhhcc
Confidence            5889999986 8999998888888898 589999998876655 44442  1 222  3333222    23344433  2


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ++|++|.++|.
T Consensus        96 G~D~vid~~g~  106 (174)
T d1jqba2          96 GVDRVIMAGGG  106 (174)
T ss_dssp             CEEEEEECSSC
T ss_pred             CcceEEEccCC
Confidence            59999999985

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.17  E-value=0.0011  Score=45.94  Aligned_cols=42  Identities=29%  Similarity=0.465  Sum_probs=36.5

Q ss_pred             ccccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           11 PAVQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        11 ~~~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      |...+++||++||.|++. +|..-++.|.+.|++|++++....
T Consensus         5 Pi~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           5 PIFCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EEEECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             ceEEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            456689999999999875 999999999999999998877543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.16  E-value=0.0012  Score=49.14  Aligned_cols=69  Identities=22%  Similarity=0.287  Sum_probs=52.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ++|.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+....    ..+  +-.+              ....
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~----~~~--~~~~--------------~~~~   74 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY----AYI--NSLE--------------NQQA   74 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC----EEE--SCCT--------------TCCC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhh----hhh--hccc--------------ccch
Confidence            5788999988 8999999999999997 599999999988888776542    111  1100              1367


Q ss_pred             cEEEECCCCCC
Q 023613           96 DIMVNNAGISG  106 (280)
Q Consensus        96 d~li~~ag~~~  106 (280)
                      |++||+..+..
T Consensus        75 DliINaTpiGm   85 (167)
T d1npya1          75 DILVNVTSIGM   85 (167)
T ss_dssp             SEEEECSSTTC
T ss_pred             hhheeccccCC
Confidence            99999977653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.00024  Score=47.64  Aligned_cols=75  Identities=20%  Similarity=0.222  Sum_probs=50.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+++||+++|.|. +..|+++|+.|.++|++|++.+.+.....  .+.+.....  +...+. +.+.    +       .
T Consensus         1 ~~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~~~~--~~~~~~-~~~~----~-------~   63 (93)
T d2jfga1           1 ADYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLPEAVE--RHTGSL-NDEW----L-------M   63 (93)
T ss_dssp             CCCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSCTTSC--EEESBC-CHHH----H-------H
T ss_pred             CCcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHhhccc--eeeccc-chhh----h-------c
Confidence            3689999999998 56799999999999999999998654221  122332222  222222 1211    1       2


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      .+|.+|...|+.
T Consensus        64 ~~d~vi~SPGi~   75 (93)
T d2jfga1          64 AADLIVASPGIA   75 (93)
T ss_dssp             HCSEEEECTTSC
T ss_pred             cCCEEEECCCCC
Confidence            779999999985

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.14  E-value=0.0007  Score=50.79  Aligned_cols=80  Identities=16%  Similarity=0.191  Sum_probs=53.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|.+|+|.|+ +|+|...+.++...|+ +|+++++++++.+... ++.  ....+...|-.  +.+.+..+...  .+++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~G--a~~~i~~~~~~--~~~~~~~~~~~--~~G~   99 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVG--ATECVNPQDYK--KPIQEVLTEMS--NGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTT--CSEEECGGGCS--SCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhC--CeeEEecCCch--hHHHHHHHHHh--cCCC
Confidence            5899999999 6899999999999985 6888899888876543 333  12222122221  22333333222  2589


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999985

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.13  E-value=0.0034  Score=45.55  Aligned_cols=113  Identities=15%  Similarity=0.146  Sum_probs=69.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----CC-CCeEEEecCCCCHHHHHHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----GE-PDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      -.++.+.|+|+ |.+|..+|..++..|.  .+++.+++++..+.....+.    .. ..+.+...|.   +         
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~---------   70 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D---------   70 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G---------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H---------
Confidence            34677888897 9999999999999874  59999999876555444442    11 2333333333   1         


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                        ....-|++|..+|....+     ..+.   .+.+..|..-.-.+.+.+.++   ..++.+++++
T Consensus        71 --~l~daDvvvitag~~~~~-----~~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~~ivvt  123 (148)
T d1ldna1          71 --DCRDADLVVICAGANQKP-----GETR---LDLVDKNIAIFRSIVESVMAS---GFQGLFLVAT  123 (148)
T ss_dssp             --GTTTCSEEEECCSCCCCT-----TTCS---GGGHHHHHHHHHHHHHHHHHH---TCCSEEEECS
T ss_pred             --HhccceeEEEeccccccc-----Ccch---hHHHHHHHHHHHHHHHHHHhh---CCCceEEEec
Confidence              124789999999976432     1121   233455555444455555443   3456666654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.00044  Score=52.19  Aligned_cols=46  Identities=28%  Similarity=0.497  Sum_probs=38.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~   63 (280)
                      .++++||+||+||+|...++.....|++|+.+.+++++.+.+ +.+.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~lG   76 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLG   76 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHT
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhhc
Confidence            356899999999999999998888999999999998887654 4444

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.07  E-value=0.012  Score=42.29  Aligned_cols=113  Identities=18%  Similarity=0.219  Sum_probs=67.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc---CCeEEEEecCcchHHHHHHHhCCCCCeEE-EecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           20 VALITGGATGIGESTVRLFHKH---GAKVCIADVQDNLGQQVCQSLGGEPDTFF-CHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .+.|+|++|.+|.++|..|+.+   ...+++.+..+.......+..+....... ...+-.+.+.+           ..-
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~-----------~~a   70 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EGA   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHH-----------TTC
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCcccc-----------CCC
Confidence            4789999999999999988743   46799999865433333333332211111 12233333322           378


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      |++|..+|....+     ..+.   .+.++.|..-.-.+.+.+.++   ..++.++.++
T Consensus        71 DvvvitaG~~~k~-----g~~R---~dl~~~N~~i~~~v~~~i~~~---~p~aivivvt  118 (145)
T d2cmda1          71 DVVLISAGVRRKP-----GMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIIT  118 (145)
T ss_dssp             SEEEECCSCCCCT-----TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             CEEEECCCccCCC-----Ccch---hhHHHHHHHHHHHHHHHHHhh---CCCcEEEEcc
Confidence            9999999985432     2233   344667766666666666554   3456666665

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.06  E-value=0.0029  Score=46.71  Aligned_cols=76  Identities=21%  Similarity=0.282  Sum_probs=50.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.+++|.|+ +++|...++.+...|++|+++++++++++.. +++..  + .++  |..+.+..+    .+++..++.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a-~~~Ga--~-~~i--~~~~~~~~~----~~~~~~~g~~   95 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA-RKLGA--S-LTV--NARQEDPVE----AIQRDIGGAH   95 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTC--S-EEE--ETTTSCHHH----HHHHHHSSEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh-hccCc--c-ccc--cccchhHHH----HHHHhhcCCc
Confidence            5889999886 9999998888888899999999998887654 34442  2 222  333333332    3333335666


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .+|.+++
T Consensus        96 ~~i~~~~  102 (166)
T d1llua2          96 GVLVTAV  102 (166)
T ss_dssp             EEEECCS
T ss_pred             ccccccc
Confidence            6666654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.03  E-value=0.00057  Score=50.26  Aligned_cols=119  Identities=16%  Similarity=0.117  Sum_probs=68.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +.+++.|.|+ |.+|..+|..++..+. ++++.+.+++.++.....+..     .........  .+.++          
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~~----------   72 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYEA----------   72 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHHH----------
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cchhh----------
Confidence            4677788897 9999999999888874 699999888766554444321     111112111  12211          


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ....-|++|..+|....+..+-...+.   .+.+..|..-...+.+.+.++   ..++.++.+|
T Consensus        73 ~~~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv~~i~~~i~~~---~p~aiviivs  130 (154)
T d1pzga1          73 ALTGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKY---CPKTFIIVVT  130 (154)
T ss_dssp             HHTTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             hhcCCCeEEEecccccCCCCCCcccch---hhhhhhhHHHHHHHHHHHHhc---CCCcEEEEeC
Confidence            113889999999986543111122232   233455655555555555443   3346666554

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.00  E-value=0.00092  Score=50.26  Aligned_cols=80  Identities=16%  Similarity=0.212  Sum_probs=53.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++++.. +++..  +..+-.-|-.+.  ...+.+..  ..+++
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A-k~~GA--~~~in~~~~~~~--~~~~~~~~--~g~G~  100 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA-MAVGA--TECISPKDSTKP--ISEVLSEM--TGNNV  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHHTC--SEEECGGGCSSC--HHHHHHHH--HTSCC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHH-HhcCC--cEEECccccchH--HHHHHHHh--ccccc
Confidence            5899999986 8999999999999995 699999999988754 44442  222211222211  11112211  12479


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|.+.|.
T Consensus       101 d~vi~~~g~  109 (176)
T d1d1ta2         101 GYTFEVIGH  109 (176)
T ss_dssp             CEEEECSCC
T ss_pred             eEEEEeCCc
Confidence            999999985

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.98  E-value=0.0043  Score=45.92  Aligned_cols=77  Identities=19%  Similarity=0.254  Sum_probs=52.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.. +++..  +..+...+-.+.         .++..+..|
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~lGa--~~~i~~~~~~~~---------~~~~~~~~d   93 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMGA--DHYIATLEEGDW---------GEKYFDTFD   93 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTC--SEEEEGGGTSCH---------HHHSCSCEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hccCC--cEEeeccchHHH---------HHhhhcccc
Confidence            5899999987 8999998887777899999999998877754 44442  222222222111         112235799


Q ss_pred             EEEECCCCCC
Q 023613           97 IMVNNAGISG  106 (280)
Q Consensus        97 ~li~~ag~~~  106 (280)
                      .++.+.+...
T Consensus        94 ~vi~~~~~~~  103 (168)
T d1piwa2          94 LIVVCASSLT  103 (168)
T ss_dssp             EEEECCSCST
T ss_pred             eEEEEecCCc
Confidence            9999887643

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.93  E-value=0.0068  Score=43.69  Aligned_cols=113  Identities=17%  Similarity=0.170  Sum_probs=67.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCCCCCeE-EEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGGEPDTF-FCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .+.|+||+|.+|.++|..|+..|.  .+++.+.++.+.+. .+..+...... .....-.+..          +....-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-~Dl~~~~~~~~~~~~~~~~~~~----------~~~~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-ADLSHIETRATVKGYLGPEQLP----------DCLKGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-HHHTTSSSSCEEEEEESGGGHH----------HHHTTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-HHHhhhhhhcCCCeEEcCCChH----------HHhCCCC
Confidence            578999999999999999998875  38888887644332 23333221111 1111111111          1124899


Q ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           97 IMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        97 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ++|..||....+     ..+.   .+.++.|..-.-.+.+.+.++   ..++.++.++
T Consensus        71 ivVitag~~~~~-----g~sR---~~ll~~N~~i~~~i~~~i~~~---~p~~iiivvt  117 (144)
T d1mlda1          71 VVVIPAGVPRKP-----GMTR---DDLFNTNATIVATLTAACAQH---CPDAMICIIS  117 (144)
T ss_dssp             EEEECCSCCCCT-----TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             EEEECCCcCCCC-----CCCc---chHHHHHHHHHHHHHHHHHhc---CCCeEEEEec
Confidence            999999975431     2232   335667776666666666554   3356666665

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.89  E-value=0.0059  Score=43.92  Aligned_cols=109  Identities=15%  Similarity=0.123  Sum_probs=62.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCC-C---CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGG-E---PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+.|.|+ |.+|..++..++..+.  .+++.+++++..+.....+.. .   ........|   .+           ...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH-----------HhC
Confidence            3556687 9999999999999874  699999988765544444432 1   222222222   21           124


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .-|++|..||....+     ..+   -.+.++.|..-...+.+.+.++   ..++.+++++
T Consensus        68 ~adivvitag~~~~~-----~~~---r~~l~~~N~~i~~~i~~~i~~~---~p~ai~ivvt  117 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP-----GET---RLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVS  117 (142)
T ss_dssp             TCSEEEECCCC-----------C---HHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECS
T ss_pred             CCceEEEecccccCc-----Ccc---hhHHhhHHHHHHHHHHHHhhcc---CCCceEEEec
Confidence            789999999975431     122   3456677776666555555543   3456666654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.88  E-value=0.003  Score=45.88  Aligned_cols=82  Identities=12%  Similarity=0.114  Sum_probs=55.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ..-|++.|.||.|-+|..+|+.|.+.|+.|.+.+|+.....+...   ...+..+...++   ..+...+.++.....+=
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~---~~~~~v~~~~~~---~~~~~v~~~~~~~~~~~   80 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL---ANADVVIVSVPI---NLTLETIERLKPYLTEN   80 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH---TTCSEEEECSCG---GGHHHHHHHHGGGCCTT
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh---hhccccccccch---hhheeeeecccccccCC
Confidence            345789999999999999999999999999999998765554322   123445544443   34555566665554333


Q ss_pred             cEEEECCC
Q 023613           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      .+++..+.
T Consensus        81 ~iiiD~~S   88 (152)
T d2pv7a2          81 MLLADLTS   88 (152)
T ss_dssp             SEEEECCS
T ss_pred             ceEEEecc
Confidence            45655554

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.87  E-value=0.0014  Score=48.98  Aligned_cols=79  Identities=15%  Similarity=0.174  Sum_probs=50.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCC-HHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTK-EEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   94 (280)
                      .|.+++|.|+ +|+|...+..+...|+. |+.+++++++++ ..+++..  +. ++  |..+ .+.+.+.++...  .++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~lGa--~~-~i--~~~~~~~~~~~~~~~~~--~~g   98 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEFGA--TE-CI--NPQDFSKPIQEVLIEMT--DGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHHTC--SE-EE--CGGGCSSCHHHHHHHHT--TSC
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHhCC--cE-EE--eCCchhhHHHHHHHHHc--CCC
Confidence            5899999998 59999999999999976 666677776654 4455552  21 22  2211 222333333221  247


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2fzwa2          99 VDYSFECIGN  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEeeecCCC
Confidence            9999999974

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.80  E-value=0.0076  Score=44.25  Aligned_cols=79  Identities=11%  Similarity=0.101  Sum_probs=55.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh------C-----CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL------G-----GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~------~-----~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +.|.|+ |-+|.++|+.|.+.|++|++.+|+++..++..+.-      .     ...++.++.+   ..+.++++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            566655 99999999999999999999999987776544321      0     1234555443   3677888888887


Q ss_pred             HHcCCccEEEECCC
Q 023613           90 EKFGTLDIMVNNAG  103 (280)
Q Consensus        90 ~~~~~~d~li~~ag  103 (280)
                      +...+=.++++..+
T Consensus        79 ~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          79 PHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGSCTTCEEEECCS
T ss_pred             hhcccccceeeccc
Confidence            66555556666554

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.77  E-value=0.0086  Score=43.63  Aligned_cols=114  Identities=12%  Similarity=0.026  Sum_probs=65.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC---------eEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGA---------KVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~---------~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .+.|+||+|.+|..++..|++.+.         .++...++.+.++.....++..  .....+...-.+.+         
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV---------   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh---------
Confidence            689999999999999999998652         1223344555555544444322  22333333222222         


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                        .+..-|++|..+|....     ...+.   .+.++.|+.-.-.+.+.+..+-  ...+.++.+|
T Consensus        77 --~~~~advViitaG~~~~-----pg~~r---~dl~~~N~~i~~~~~~~i~k~a--~~~~~vivvs  130 (154)
T d1y7ta1          77 --AFKDADYALLVGAAPRK-----AGMER---RDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVG  130 (154)
T ss_dssp             --HTTTCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             --hcccccEEEeecCcCCC-----CCCcH---HHHHHHHHHHHHHHHHHHHHhC--CCCcEEEEec
Confidence              22489999999998543     23343   4445666666555555554431  1235555554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.74  E-value=0.0083  Score=43.33  Aligned_cols=73  Identities=14%  Similarity=0.135  Sum_probs=49.4

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----C-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----G-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |.+.|+|+ |.+|..+|..++.+|.  .+++.+.+++..+.....+.    . .........|.   ++           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---AA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---GG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---HH-----------
Confidence            56778895 8999999999998873  69999999876655443332    1 12233333332   21           


Q ss_pred             cCCccEEEECCCCCC
Q 023613           92 FGTLDIMVNNAGISG  106 (280)
Q Consensus        92 ~~~~d~li~~ag~~~  106 (280)
                      ...-|++|..||...
T Consensus        67 l~~adiVVitaG~~~   81 (146)
T d1hyha1          67 LADADVVISTLGNIK   81 (146)
T ss_dssp             GTTCSEEEECCSCGG
T ss_pred             hccccEEEEeccccc
Confidence            137899999999754

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.65  E-value=0.017  Score=42.96  Aligned_cols=116  Identities=13%  Similarity=0.063  Sum_probs=65.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHc---CC----eEEEEecCc--chHHHHHHHhCCC--CCeE-EEecCCCCHHHHHHH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKH---GA----KVCIADVQD--NLGQQVCQSLGGE--PDTF-FCHCDVTKEEDVCSA   84 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~---g~----~V~~~~r~~--~~~~~~~~~~~~~--~~~~-~~~~D~~~~~~~~~~   84 (280)
                      +.-.|.||||+|.||..++..|++.   |.    .+.+.+.+.  +.++...-++...  .... ...+  ++..     
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~~-----   95 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDPY-----   95 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCHH-----
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccch-----
Confidence            3557999999999999999999974   32    244455443  3334333333221  1222 2222  2222     


Q ss_pred             HHHHHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           85 VDLTVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        85 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                           +.+...|++|..+|....+     ..+   -.+.++.|..-.-.+.+.+.++=  .+..+|+.++
T Consensus        96 -----~~~~~aDvVvi~ag~~rkp-----g~t---R~Dll~~N~~I~k~~~~~i~~~a--~~~~~vlvv~  150 (175)
T d7mdha1          96 -----EVFEDVDWALLIGAKPRGP-----GME---RAALLDINGQIFADQGKALNAVA--SKNVKVLVVG  150 (175)
T ss_dssp             -----HHTTTCSEEEECCCCCCCT-----TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             -----hhccCCceEEEeeccCCCC-----CCc---HHHHHHHHHHHHHHHHHHHHhhC--CCCcEEEEec
Confidence                 2235899999999986432     233   45567777666555555554431  1234555553

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.63  E-value=0.003  Score=47.22  Aligned_cols=80  Identities=18%  Similarity=0.176  Sum_probs=51.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|.+|+|.|+ |+||...+..+...|++ |+++++++++++. .+++..  . .++...-.+ +......+..  ..+++
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a~~~Ga--~-~~i~~~~~~-~~~~~~~~~~--~~~G~   99 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK-AKALGA--T-DCLNPRELD-KPVQDVITEL--TAGGV   99 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHTTC--S-EEECGGGCS-SCHHHHHHHH--HTSCB
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH-HHHhCC--C-cccCCccch-hhhhhhHhhh--hcCCC
Confidence            5889999975 99999999999999985 7778888877654 444542  1 122211111 1222222222  22589


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|.++|.
T Consensus       100 d~vie~~G~  108 (174)
T d1e3ia2         100 DYSLDCAGT  108 (174)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEEeccc
Confidence            999999985

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.52  E-value=0.017  Score=42.31  Aligned_cols=114  Identities=12%  Similarity=0.107  Sum_probs=69.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .+..+.+.|.|+ |.+|..+|..++..|.  .+++.+++++..+.....+..     .........|..   +       
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~---~-------   85 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS---V-------   85 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG---G-------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh---h-------
Confidence            355677888896 9999999999999985  599999988766554433321     122222233332   2       


Q ss_pred             HHHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           88 TVEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                          ...-|++|..||....+     ..+.   .+.++.|..-.-.+.+.+.+.   ..++-+++++
T Consensus        86 ----~~~adiVVitAg~~~~~-----g~tR---~~l~~~N~~i~~~i~~~i~~~---~p~aiiivvt  137 (160)
T d1i0za1          86 ----TANSKIVVVTAGVRQQE-----GESR---LNLVQRNVNVFKFIIPQIVKY---SPDCIIIVVS  137 (160)
T ss_dssp             ----GTTCSEEEECCSCCCCT-----TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECS
T ss_pred             ----cccccEEEEecCCcccc-----Ccch---HHHHHHHHHHHHHHHHHHHhc---CCCcEEEEeC
Confidence                24789999999975432     2222   234455655444444444443   3346666665

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.49  E-value=0.0067  Score=44.01  Aligned_cols=75  Identities=9%  Similarity=0.057  Sum_probs=54.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      .++|.|. +.+|+.+++.|.+.|..|+++..+++......+.... ..+.++..|.++++.++++      ...+.|.+|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~-~~~~vi~Gd~~d~~~L~~a------~i~~a~~vi   76 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DNADVIPGDSNDSSVLKKA------GIDRCRAIL   76 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TTCEEEESCTTSHHHHHHH------TTTTCSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc-CCcEEEEccCcchHHHHHh------ccccCCEEE
Confidence            4677777 6999999999999999999999988765554444332 3577889999998754321      114677787


Q ss_pred             ECC
Q 023613          100 NNA  102 (280)
Q Consensus       100 ~~a  102 (280)
                      ...
T Consensus        77 ~~~   79 (153)
T d1id1a_          77 ALS   79 (153)
T ss_dssp             ECS
T ss_pred             Ecc
Confidence            665

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.47  E-value=0.039  Score=39.50  Aligned_cols=101  Identities=16%  Similarity=0.189  Sum_probs=62.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcch--HHHHHHHh----CCC-CCeEE--EecCCCCHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNL--GQQVCQSL----GGE-PDTFF--CHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~--~~~~~~~~----~~~-~~~~~--~~~D~~~~~~~~~~~~~~   88 (280)
                      .+.|+||+|.+|..+|..++..|  ..+++.+++++.  .+.....+    ... ..+..  ...+  +.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~---------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLR---------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHH---------
Confidence            48899999999999999999988  369999987632  22222222    111 22222  2221  221         


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHh
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARI  141 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  141 (280)
                        ....-|++|..||....+     ..+.   .+.++.|..-.-.+.+.+.++
T Consensus        71 --~l~~aDvVVitAG~~~~~-----g~sR---~dl~~~Na~iv~~i~~~i~~~  113 (145)
T d1hyea1          71 --IIDESDVVIITSGVPRKE-----GMSR---MDLAKTNAKIVGKYAKKIAEI  113 (145)
T ss_dssp             --GGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             --HhccceEEEEecccccCC-----CCCh---hhhhhhhHHHHHHHHHHHhcc
Confidence              124789999999975431     2333   346667776666666666554

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.47  E-value=0.025  Score=40.46  Aligned_cols=110  Identities=14%  Similarity=0.068  Sum_probs=64.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCc--chHHHHHHHh----CCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQD--NLGQQVCQSL----GGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~--~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.|+|++|.+|.++|..++..+.  .+++.+.+.  +..+.....+    .......+...|..   +           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~---~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE---D-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG---G-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH---H-----------
Confidence            478999999999999999999874  488888543  3332222222    22234444444432   1           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ..+-|++|..||....+     ..+   =.+.++.|..-.-.+.+.+.++   ..++.++.++
T Consensus        68 ~~~aDiVvitaG~~~~~-----g~~---R~dl~~~N~~I~~~i~~~i~~~---~p~~i~ivvt  119 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQP-----GQT---RIDLAGDNAPIMEDIQSSLDEH---NDDYISLTTS  119 (142)
T ss_dssp             GTTCSEEEECCCCCCCT-----TCC---HHHHHHHHHHHHHHHHHHHHTT---CSCCEEEECC
T ss_pred             hhhcCEEEEeccccccc-----CCc---hhhHHHHHHHHHHHHHHHHHhc---CCCceEEEec
Confidence            24889999999975431     123   3456666765555444444332   2345555553

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.45  E-value=0.0054  Score=46.67  Aligned_cols=116  Identities=11%  Similarity=0.054  Sum_probs=65.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|.+|||.|+ +++|...+..+...|+ +|+++++++++++.. +.+.  .. ++  .|-.+.+-.++ +.++. .-.+.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-~~~G--a~-~~--~~~~~~~~~~~-i~~~t-~g~g~   95 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQG--FE-IA--DLSLDTPLHEQ-IAALL-GEPEV   95 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTT--CE-EE--ETTSSSCHHHH-HHHHH-SSSCE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh-hhcc--cc-EE--EeCCCcCHHHH-HHHHh-CCCCc
Confidence            5899999986 7999887777777777 588889988877654 3333  12 22  23333222222 22221 12379


Q ss_pred             cEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEcc
Q 023613           96 DIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICS  155 (280)
Q Consensus        96 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS  155 (280)
                      |++|.+.|.-... .....           .+..+.-..++.++..+  +..|+|+.++-
T Consensus        96 D~vid~vG~~~~~-~~~~~-----------~~~~~~~~~l~~~~~~~--r~gG~v~~~G~  141 (195)
T d1kola2          96 DCAVDAVGFEARG-HGHEG-----------AKHEAPATVLNSLMQVT--RVAGKIGIPGL  141 (195)
T ss_dssp             EEEEECCCTTCBC-SSTTG-----------GGSBCTTHHHHHHHHHE--EEEEEEEECSC
T ss_pred             EEEEECccccccC-Ccccc-----------eeecCcHHHHHHHHHHH--hcCCEEEEeee
Confidence            9999999853221 10000           01112222344555555  34689998864

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.41  E-value=0.0068  Score=45.50  Aligned_cols=39  Identities=18%  Similarity=0.193  Sum_probs=34.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      ..+.||++.|.|.+. ||+.+++.+...|++|+..+|+..
T Consensus        38 ~~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          38 PLIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CcccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            358999999999876 999999999999999999998753

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.40  E-value=0.0056  Score=45.38  Aligned_cols=78  Identities=23%  Similarity=0.324  Sum_probs=50.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .|.+++|.|+ |++|...+..+...|+. |+++++++++++...+ +.  .. .++  |..+ +..++..+...  ..++
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~g--a~-~~i--~~~~-~~~~~~~~~~~--~~g~  101 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LG--AD-HVV--DARR-DPVKQVMELTR--GRGV  101 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TT--CS-EEE--ETTS-CHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-cc--cc-eee--cCcc-cHHHHHHHhhC--CCCc
Confidence            4889999986 99999999988888865 6777888876665443 33  12 233  2222 23333222111  1369


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |++|.++|.
T Consensus       102 d~vid~~g~  110 (172)
T d1h2ba2         102 NVAMDFVGS  110 (172)
T ss_dssp             EEEEESSCC
T ss_pred             eEEEEecCc
Confidence            999999985

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.38  E-value=0.043  Score=39.07  Aligned_cols=110  Identities=17%  Similarity=0.178  Sum_probs=67.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .+.|+|+ |.+|..++..++..|  ..+++.+.+++..+.....+..     ..+..+...+  +.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            3667796 899999999999987  4699999998766654433321     1233333222  2221           2


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ..-|++|..+|....+     ..+.   .+.++.|..-...+.+.+.++   ..++.+++++
T Consensus        68 ~dadvvvitag~~~~~-----g~~r---~~l~~~N~~i~~~i~~~i~~~---~p~aivivvt  118 (142)
T d1guza1          68 ANSDIVIITAGLPRKP-----GMTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVS  118 (142)
T ss_dssp             TTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECC
T ss_pred             cCCeEEEEEEecCCCC-----CCch---HHHHHHHHHHHHHHHHHhhcc---CCCeEEEEec
Confidence            4889999999975431     1222   345566666555555555543   3446666553

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.38  E-value=0.0033  Score=48.15  Aligned_cols=43  Identities=26%  Similarity=0.363  Sum_probs=38.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~   58 (280)
                      +|+||+++|.| .|.+|+.+|+.|.+.|++|++++.+.+.....
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            69999999997 77899999999999999999999887766554

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.36  E-value=0.0054  Score=44.44  Aligned_cols=38  Identities=18%  Similarity=0.389  Sum_probs=33.4

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~   51 (280)
                      -..++||++||+||+ .+|..-++.|.+.|++|.+++..
T Consensus         8 ~~~l~gkrvLViGgG-~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           8 AHQLKDKRILLIGGG-EVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EECCTTCEEEEEEES-HHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             heeeCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCC
Confidence            346899999999995 59999999999999999988654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.32  E-value=0.016  Score=42.42  Aligned_cols=76  Identities=26%  Similarity=0.334  Sum_probs=49.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.++||.|+ |++|...+..+...|++|+++++++++++.. +.+..  +..   .|-.+.+.    .+.+.+...+.|
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~-k~~Ga--~~~---~~~~~~~~----~~~~~~~~~~~~   95 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGA--DLV---VNPLKEDA----AKFMKEKVGGVH   95 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTC--SEE---ECTTTSCH----HHHHHHHHSSEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh-hhcCc--cee---cccccchh----hhhcccccCCCc
Confidence            5889999875 8999998888888899999999999887654 44442  222   23333222    223333335666


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      .+|.+++
T Consensus        96 ~~v~~~~  102 (168)
T d1rjwa2          96 AAVVTAV  102 (168)
T ss_dssp             EEEESSC
T ss_pred             eEEeecC
Confidence            6667765

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.30  E-value=0.037  Score=39.36  Aligned_cols=109  Identities=16%  Similarity=0.186  Sum_probs=65.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcC--CeEEEEecCcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           20 VALITGGATGIGESTVRLFHKHG--AKVCIADVQDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+.|.|+ |.+|..++..++..+  ..+++.+.+++.++.....+..    .........|.   ++           ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------hc
Confidence            3566786 899999999999876  4699999998766654444321    12333333332   11           23


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .-|++|..||....+     ..+.   .+.+..|..-...+.+.+.++   ..++.+++++
T Consensus        67 ~adivvitag~~~~~-----g~~r---~dl~~~N~~I~~~i~~~i~~~---~p~aivivvt  116 (140)
T d1a5za1          67 GSDVVIVAAGVPQKP-----GETR---LQLLGRNARVMKEIARNVSKY---APDSIVIVVT  116 (140)
T ss_dssp             TCSEEEECCCCCCCS-----SCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECS
T ss_pred             CCCEEEEecccccCC-----Ccch---hhhhccccchHHHHHHHHHhc---CCCcEEEEeC
Confidence            789999999975431     2332   334555654444444444433   3456666654

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.29  E-value=0.025  Score=40.44  Aligned_cols=109  Identities=16%  Similarity=0.207  Sum_probs=62.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCC-----CCeEEE-ecCCCCHHHHHHHHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGE-----PDTFFC-HCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~D~~~~~~~~~~~~~~~~~   91 (280)
                      |++.|.|+ |.+|.++|..|+..+. ++++.+.+++..+.....+...     ....+. .-|..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            45667786 9999999999998874 7999999887655544443211     122222 223221              


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccC-CCceEEEEc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQ-TKGTIISIC  154 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~is  154 (280)
                      ...-|++|.+||....+     ..   +-.+.++.|..    +.+.+.+.+.+. .++.++.++
T Consensus        67 ~~~advvvitag~~~~~-----~~---~r~dl~~~N~~----i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKP-----GM---SREDLIKVNAD----ITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             GTTCSEEEECCSCC-----------------CHHHHHH----HHHHHHHHHGGGCTTCEEEECS
T ss_pred             hcCCCEEEEeeeccCCc-----Cc---chhHHHhHHHH----HHHHHHHHHhccCCCceEEEeC
Confidence            13789999999976431     11   22344555653    445555555554 345555543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.28  E-value=0.0028  Score=47.43  Aligned_cols=47  Identities=15%  Similarity=0.248  Sum_probs=39.9

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~   62 (280)
                      .+++||.+||.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            3589999999987 578999999998777 8999999999888776655

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.004  Score=47.28  Aligned_cols=42  Identities=14%  Similarity=0.290  Sum_probs=36.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~   61 (280)
                      |++.|.|+ |-+|..+|..|+..|+.|++.+++++.+++..+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            67889998 6799999999999999999999998876655443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.14  E-value=0.062  Score=39.06  Aligned_cols=77  Identities=12%  Similarity=0.062  Sum_probs=51.0

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----CCC-CeEEEecCCCCHHHHHHHHHHH
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----GEP-DTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~----~~~-~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      ++...+.|+|+ |.+|..+|..|+..|.  .+++.+++++..+.....+.    ... .......|..            
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~------------   83 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN------------   83 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG------------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh------------
Confidence            34445777786 9999999999998874  59999999876655444432    112 2222233332            


Q ss_pred             HHHcCCccEEEECCCCCCC
Q 023613           89 VEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~  107 (280)
                        ....-|++|..||....
T Consensus        84 --~~~~adivvitag~~~~  100 (159)
T d2ldxa1          84 --VSANSKLVIITAGARMV  100 (159)
T ss_dssp             --GGTTEEEEEECCSCCCC
T ss_pred             --hhccccEEEEecccccC
Confidence              12488999999997653

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.13  E-value=0.0062  Score=45.35  Aligned_cols=80  Identities=18%  Similarity=0.184  Sum_probs=52.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH-HHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE-DVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   93 (280)
                      -.|.+|+|.|+ +|+|...++.+...|+ +|+++++++++++... ++..  . .++  |..+.+ .+.+.....  .-+
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa--~-~~i--~~~~~d~~~~~~~~~~--~~~   96 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGA--T-ECL--NPKDYDKPIYEVICEK--TNG   96 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTC--S-EEE--CGGGCSSCHHHHHHHH--TTS
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCC--c-EEE--cCCCchhHHHHHHHHh--cCC
Confidence            35899999986 8999999999999997 5888899988876653 4442  2 222  222211 122212211  124


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      +.|++|.++|.
T Consensus        97 G~d~vid~~g~  107 (174)
T d1p0fa2          97 GVDYAVECAGR  107 (174)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEEcCCC
Confidence            79999999874

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.04  E-value=0.0051  Score=45.64  Aligned_cols=39  Identities=26%  Similarity=0.463  Sum_probs=35.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      .+++||.++|.|-|.=+|+-++..|+++|++|..+..+.
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~   63 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN   63 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence            479999999999999999999999999999998877653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.03  E-value=0.15  Score=36.51  Aligned_cols=116  Identities=16%  Similarity=0.199  Sum_probs=67.3

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ..+.|.|+ |++|..++..+++.+. ++++.+++++..+.....+..     ..+..+...+  +.+           ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc
Confidence            45777785 8999999998888774 599999988766654444321     1233333322  111           12


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ..-|++|..+|....+...-...+.   .+.++.|..-...+.+.+..+   ..++.++++|
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~~iv~~i~~~i~~~---~p~aivivvt  125 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNNKIMIEIGGHIKKN---CPNAFIIVVT  125 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             CCCcEEEEecccccCCCCCccccch---hHHHHHHHHHHHHHHHHHHhc---CCCeEEEEec
Confidence            4789999999986542111112222   234556655555555555443   3346666654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.01  E-value=0.041  Score=40.67  Aligned_cols=84  Identities=13%  Similarity=0.095  Sum_probs=59.0

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC----------------CCeEEEecCCCCHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE----------------PDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~~~   82 (280)
                      +.+-|.|- |-+|..+|+.|++.|++|++.+|++++.+++.+.-...                .....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            34566666 89999999999999999999999998887765431100                11123333456667888


Q ss_pred             HHHHHHHHHcCCccEEEECCC
Q 023613           83 SAVDLTVEKFGTLDIMVNNAG  103 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag  103 (280)
                      ...+.+.+...+-+++|...-
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888888776655667777653

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.00  E-value=0.064  Score=38.22  Aligned_cols=110  Identities=13%  Similarity=0.131  Sum_probs=66.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhCC----CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLGG----EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+.|+|+ |.+|.++|..++..|.  .+++.+++++..+.....+..    .....+...+  +.++           ..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~-----------~~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEI-----------CR   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHH-----------hh
Confidence            3566686 9999999999998875  599999998766544333321    1223333222  1111           13


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      .-|++|..||....     ...+.   .+.++.|..-.-.+.+.+.++   ..++.++.+|
T Consensus        69 daDvVVitaG~~~~-----~g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~ai~ivvt  118 (143)
T d1llda1          69 DADMVVITAGPRQK-----PGQSR---LELVGATVNILKAIMPNLVKV---APNAIYMLIT  118 (143)
T ss_dssp             TCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECC
T ss_pred             CCcEEEEecccccC-----CCCch---hhhhhhhHHHHHHHHHHHHhh---CCCeEEEEeC
Confidence            67999999997543     12333   346677776555555555443   3345555554

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.94  E-value=0.0071  Score=44.99  Aligned_cols=43  Identities=12%  Similarity=0.115  Sum_probs=37.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~   61 (280)
                      .|++.|.|+ |.+|.++|..|++.|++|.+.+|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            378899998 8999999999999999999999998887776543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0075  Score=44.64  Aligned_cols=44  Identities=18%  Similarity=0.234  Sum_probs=39.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~   58 (280)
                      +++||.++|.|-|.-+|+.++..|.++|++|..+......+.+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~   79 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE   79 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHH
Confidence            68999999999999999999999999999999988877655543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.87  E-value=0.0088  Score=43.97  Aligned_cols=46  Identities=11%  Similarity=0.112  Sum_probs=39.5

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   60 (280)
                      +++||.++|.|-|.-+|+.++..|.++|++|.++.+....+....+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~   79 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE   79 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh
Confidence            5899999999999999999999999999999988777655554443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.84  E-value=0.069  Score=38.90  Aligned_cols=82  Identities=12%  Similarity=0.062  Sum_probs=56.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC-------------CCCCeEEEecCCCCHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG-------------GEPDTFFCHCDVTKEEDVCS   83 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~~~~~   83 (280)
                      |.++|.|+ |-+|..+|+.|.+.|+  +|++.+++++.++...+.-.             ...++.++.   ..++.+..
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            46888875 8999999999999986  58889999887776544321             012333332   34677888


Q ss_pred             HHHHHHHHcCCccEEEECCCC
Q 023613           84 AVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        84 ~~~~~~~~~~~~d~li~~ag~  104 (280)
                      +++++.....+-.+++...++
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            888888776555566666654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.78  E-value=0.015  Score=43.95  Aligned_cols=41  Identities=20%  Similarity=0.160  Sum_probs=35.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      ..++.||++.|.| .|.||+.+|+.+...|++|+..++....
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccc
Confidence            3468999999996 5689999999999999999999886543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.70  E-value=0.0062  Score=45.93  Aligned_cols=83  Identities=12%  Similarity=0.094  Sum_probs=51.2

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHH-----HHcC
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTV-----EKFG   93 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-----~~~~   93 (280)
                      |++.|.|+ |-+|..+|..|+..|++|++.+++++.+++..+.+...-. ....-.....+.....+..+.     +...
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   82 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLV-GRVDKGRMTPAKMAEVLNGIRPTLSYGDFG   82 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHH-HHHTTTSSCHHHHHHHHHHEEEESSSTTGG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHH-hhhcccccchhhhhhhhceeeccccccccc
Confidence            45788888 7799999999999999999999998876655443321000 000012234555555555442     1123


Q ss_pred             CccEEEECCC
Q 023613           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~~d~li~~ag  103 (280)
                      ..|.+|-+..
T Consensus        83 ~adlViEav~   92 (186)
T d1wdka3          83 NVDLVVEAVV   92 (186)
T ss_dssp             GCSEEEECCC
T ss_pred             ccceeeeeec
Confidence            4577776553

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.66  E-value=0.012  Score=43.48  Aligned_cols=79  Identities=18%  Similarity=0.289  Sum_probs=50.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHH-HHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEED-VCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~~   94 (280)
                      .|.+++|.|+ +|+|...+..+...|+. |+.+++++++++.. +++..  + .++  |..+.++ ..+..+...  .++
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a-~~~GA--d-~~i--n~~~~~~~~~~~~~~~~--~~G   98 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGA--T-DFV--NPNDHSEPISQVLSKMT--NGG   98 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTC--C-EEE--CGGGCSSCHHHHHHHHH--TSC
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH-HHcCC--c-EEE--cCCCcchhHHHHHHhhc--cCC
Confidence            5899999986 67888888888888764 88888888887654 34442  2 222  2222211 222222221  248


Q ss_pred             ccEEEECCCC
Q 023613           95 LDIMVNNAGI  104 (280)
Q Consensus        95 ~d~li~~ag~  104 (280)
                      +|+++.+.|.
T Consensus        99 ~d~vid~~G~  108 (175)
T d1cdoa2          99 VDFSLECVGN  108 (175)
T ss_dssp             BSEEEECSCC
T ss_pred             cceeeeecCC
Confidence            9999999985

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.38  E-value=0.093  Score=38.55  Aligned_cols=77  Identities=16%  Similarity=0.157  Sum_probs=51.8

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCC-------------------CeEEEecCCCCHHHHHHHHH
Q 023613           26 GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEP-------------------DTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        26 a~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~-------------------~~~~~~~D~~~~~~~~~~~~   86 (280)
                      |.|-+|.++|+.|++.|++|.+.+|++++.+++.+.-....                   ....+..-+.+...+...++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            67899999999999999999999999998888766532110                   11122223444555556666


Q ss_pred             HHHHHcCCccEEEECC
Q 023613           87 LTVEKFGTLDIMVNNA  102 (280)
Q Consensus        87 ~~~~~~~~~d~li~~a  102 (280)
                      .+...+.+=+++++..
T Consensus        88 ~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          88 QLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHCCTTCEEEECC
T ss_pred             hhhhhccccceecccC
Confidence            6666655555666654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.31  E-value=0.0077  Score=46.91  Aligned_cols=49  Identities=18%  Similarity=0.329  Sum_probs=41.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~   63 (280)
                      .+|+||+++|-| .|.+|..+|+.|.+.|++|+.++.+............
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g   83 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG   83 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC
Confidence            468999998887 5689999999999999999999998887777666544

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.29  E-value=0.022  Score=43.21  Aligned_cols=72  Identities=22%  Similarity=0.239  Sum_probs=53.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      .++.||+||=.|+++|+   ++..++..|+. |+.++.+++..+...+...   ++.++.+|+.+.             -
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~~---~~~~~~~D~~~l-------------~  105 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNCG---GVNFMVADVSEI-------------S  105 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHCT---TSEEEECCGGGC-------------C
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHccc---cccEEEEehhhc-------------C
Confidence            46799999999999883   33456677764 9999999887766555433   577888997532             2


Q ss_pred             CCccEEEECCCC
Q 023613           93 GTLDIMVNNAGI  104 (280)
Q Consensus        93 ~~~d~li~~ag~  104 (280)
                      ++.|+||.|...
T Consensus       106 ~~fD~Vi~NPPf  117 (197)
T d1ne2a_         106 GKYDTWIMNPPF  117 (197)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CcceEEEeCccc
Confidence            689999999765

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.29  E-value=0.096  Score=38.60  Aligned_cols=45  Identities=13%  Similarity=0.176  Sum_probs=38.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~   63 (280)
                      .+|++||..|++.|   ..+..|+++|++|+.++.+++.++...+..+
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~   63 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERG   63 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHC
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhc
Confidence            36899999999988   3777999999999999999988887766653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.27  E-value=0.034  Score=42.04  Aligned_cols=39  Identities=26%  Similarity=0.383  Sum_probs=34.3

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .++.||++.|.|- |.||+.+|+.+...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4689999999985 68999999999999999999887644

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.21  E-value=0.019  Score=40.21  Aligned_cols=70  Identities=21%  Similarity=0.290  Sum_probs=48.6

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      |.++|.|. +.+|+.+++.|.  |..|+++..+++..+...+     ..+.++.+|.++++.++++      ...+-+.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~-----~~~~~i~Gd~~~~~~L~~a------~i~~A~~v   66 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKA------NVRGARAV   66 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH-----TTCEEEESCTTSHHHHHHT------TCTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh-----cCccccccccCCHHHHHHh------hhhcCcEE
Confidence            45777774 789999999994  5568888888877665533     2467888999998765431      12456677


Q ss_pred             EECC
Q 023613           99 VNNA  102 (280)
Q Consensus        99 i~~a  102 (280)
                      |...
T Consensus        67 i~~~   70 (129)
T d2fy8a1          67 IVNL   70 (129)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            6544

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.19  E-value=0.23  Score=35.14  Aligned_cols=109  Identities=14%  Similarity=0.155  Sum_probs=63.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCcchHHHHHHHhC----C-CCCeEEEe-cCCCCHHHHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGA--KVCIADVQDNLGQQVCQSLG----G-EPDTFFCH-CDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~~-~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.|.|+ |.+|.++|..++.+|.  .+++++.+++..+.....+.    . .....+.. -|..   +           
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~---~-----------   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS---L-----------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG---G-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH---H-----------
Confidence            3567786 9999999999998874  49999998877654333331    1 12223332 2322   1           


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ...-|++|..||....+     ..+   -.+.+..|..-...+.+.+.++   ..++.++.++
T Consensus        67 ~~~adiVvitag~~~~~-----g~~---r~~l~~~n~~i~~~i~~~i~~~---~p~aivivvt  118 (142)
T d1ojua1          67 LKGSEIIVVTAGLARKP-----GMT---RLDLAHKNAGIIKDIAKKIVEN---APESKILVVT  118 (142)
T ss_dssp             GTTCSEEEECCCCCCCS-----SCC---HHHHHHHHHHHHHHHHHHHHTT---STTCEEEECS
T ss_pred             hccccEEEEeccccCCC-----CCc---hHHHHHHhhHHHHHHHHHHHhh---CCCcEEEEec
Confidence            24789999999975431     223   2445555655554444444332   2345555554

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.16  E-value=0.024  Score=42.43  Aligned_cols=65  Identities=20%  Similarity=0.168  Sum_probs=45.0

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH--------HhCCCCCeEEEecCCCCH
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ--------SLGGEPDTFFCHCDVTKE   78 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~~~D~~~~   78 (280)
                      ..++.||++.|.| .+.||+++++.+...|++|+..++..........        ++-...++..+.|.+++.
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~  111 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPE  111 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTT
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCch
Confidence            3468899999988 6899999999999999999999886543322111        111124666666666553

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.07  E-value=0.031  Score=45.67  Aligned_cols=115  Identities=10%  Similarity=0.021  Sum_probs=69.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .+|++||=.++..| |.++  ++++.+.+|+.++.++..++...+.+..+  .++.++..|..+.      .+.+.+...
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~~~  214 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKEGE  214 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHTTC
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhhhc
Confidence            57999998877654 3333  23455778999999998877766655322  4678888886432      334444446


Q ss_pred             CccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEE
Q 023613           94 TLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISI  153 (280)
Q Consensus        94 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~i  153 (280)
                      +.|.||.++.....  .   .......       ......+++.+.+.++  ++|.+++.
T Consensus       215 ~fD~Vi~DpP~~~~--~---~~~~~~~-------~~~~~~l~~~a~~lLk--pGG~Lv~~  260 (318)
T d1wxxa2         215 RFDLVVLDPPAFAK--G---KKDVERA-------YRAYKEVNLRAIKLLK--EGGILATA  260 (318)
T ss_dssp             CEEEEEECCCCSCC--S---TTSHHHH-------HHHHHHHHHHHHHTEE--EEEEEEEE
T ss_pred             CCCEEEEcCCcccc--c---hHHHHHH-------HHHHHHHHHHHHHHcC--CCCEEEEE
Confidence            89999999865432  1   1111111       1123356667777764  35666553

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.07  E-value=0.052  Score=37.94  Aligned_cols=73  Identities=21%  Similarity=0.348  Sum_probs=54.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEE-EecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIM   98 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   98 (280)
                      .+.|.|++|..|+++++.+.+.|+.++. .+++...      .+. ..++   ..|++.++.+.+.++...+.  ++-+|
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~-~~DV---vIDFS~p~~~~~~l~~~~~~--~~p~V   69 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELD-SPDV---VIDFSSPEALPKTVDLCKKY--RAGLV   69 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECS-CCSE---EEECSCGGGHHHHHHHHHHH--TCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hhc-cCCE---EEEecCHHHHHHHHHHHHhc--CCCEE
Confidence            4899999999999999999899998764 4544321      111 2343   35999999999999988876  66677


Q ss_pred             EECCCC
Q 023613           99 VNNAGI  104 (280)
Q Consensus        99 i~~ag~  104 (280)
                      +-..|.
T Consensus        70 iGTTG~   75 (128)
T d1vm6a3          70 LGTTAL   75 (128)
T ss_dssp             ECCCSC
T ss_pred             EEcCCC
Confidence            766664

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.93  E-value=0.087  Score=37.11  Aligned_cols=76  Identities=17%  Similarity=0.310  Sum_probs=52.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEEE-EecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           20 VALITGGATGIGESTVRLFHKH-GAKVCI-ADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~-g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      ++.|.|++|..|+++++...+. ++.++. +++.+.. ....   ....++   ..|++.++.+...++...+.  ++-+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~-~~~~---~~~~Dv---vIDFS~p~~~~~~~~~~~~~--~~~~   71 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPL-SLLT---DGNTEV---VIDFTHPDVVMGNLEFLIDN--GIHA   71 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCT-HHHH---TTTCSE---EEECCCTTTHHHHHHHHHHT--TCEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCch-hhhc---cccCCE---EEEcccHHHHHHHHHHHHhc--CCCE
Confidence            4789999999999999988765 666554 5554332 2211   122343   35999999999988888765  6667


Q ss_pred             EEECCCC
Q 023613           98 MVNNAGI  104 (280)
Q Consensus        98 li~~ag~  104 (280)
                      ||-..|.
T Consensus        72 ViGTTG~   78 (135)
T d1yl7a1          72 VVGTTGF   78 (135)
T ss_dssp             EECCCCC
T ss_pred             EEecccc
Confidence            7755553

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.82  E-value=0.043  Score=39.88  Aligned_cols=79  Identities=11%  Similarity=0.110  Sum_probs=52.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC----------CCCCeEEEecCCCCHHHHHHHH---HH
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG----------GEPDTFFCHCDVTKEEDVCSAV---DL   87 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~---~~   87 (280)
                      +-|.| .|-+|..+|+.|++.|++|++.+|+++..+.+.+.-.          ...++.+  .-+.+.+.++.++   +.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii--~~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVII--TMLPNSPHVKEVALGENG   79 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEE--ECCSSHHHHHHHHHSTTC
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEE--EEcCCHHHHHHHHhCCcc
Confidence            44454 4899999999999999999999999887776644321          0123333  3456777777776   33


Q ss_pred             HHHHcCCccEEEECC
Q 023613           88 TVEKFGTLDIMVNNA  102 (280)
Q Consensus        88 ~~~~~~~~d~li~~a  102 (280)
                      +.....+-+++|.+.
T Consensus        80 ~~~~~~~g~iiid~s   94 (161)
T d1vpda2          80 IIEGAKPGTVLIDMS   94 (161)
T ss_dssp             HHHHCCTTCEEEECS
T ss_pred             hhhccCCCCEEEECC
Confidence            444444445666654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.79  E-value=0.042  Score=41.14  Aligned_cols=64  Identities=13%  Similarity=0.042  Sum_probs=44.7

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHH----------HHhCCCCCeEEEecCCCC
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVC----------QSLGGEPDTFFCHCDVTK   77 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~~~~~~~D~~~   77 (280)
                      ..++.++++.|.| .|.||+++++.+...|.+|+..++.........          +++-...++..+.+.+++
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~  112 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHP  112 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCT
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccc
Confidence            4468999999998 568999999999999999999998543222211          111123566667776665

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.75  E-value=0.15  Score=38.39  Aligned_cols=76  Identities=21%  Similarity=0.211  Sum_probs=54.6

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+++|++||=.|+++|.   ++..+++.|+ +|++++.++..++...+.+.. ..+..++..|..+.             
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------
Confidence            46799999999998662   2233456775 699999998877776665543 25677888886432             


Q ss_pred             cCCccEEEECCCCC
Q 023613           92 FGTLDIMVNNAGIS  105 (280)
Q Consensus        92 ~~~~d~li~~ag~~  105 (280)
                      .++.|+||.|....
T Consensus       107 ~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 NSRVDIVIMNPPFG  120 (201)
T ss_dssp             CCCCSEEEECCCCS
T ss_pred             CCcCcEEEEcCccc
Confidence            25899999998764

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.72  E-value=0.02  Score=41.67  Aligned_cols=35  Identities=14%  Similarity=-0.006  Sum_probs=31.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~   55 (280)
                      +++|.|+ |.+|..++..|++.|++|.+++|+++..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            5788888 9999999999999999999999987644

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.034  Score=40.59  Aligned_cols=39  Identities=23%  Similarity=0.483  Sum_probs=34.9

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      .|.||+++|.|-+ -+|+.+|+.+...|++|++++.++..
T Consensus        21 ~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccch
Confidence            4789999999865 79999999999999999999998743

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.67  E-value=0.053  Score=40.75  Aligned_cols=41  Identities=15%  Similarity=0.107  Sum_probs=34.9

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      ..++.||++.|.|. |.||+.+++.+...|++|+..++....
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            34688999999975 589999999999999999998876543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.64  E-value=0.18  Score=36.21  Aligned_cols=101  Identities=19%  Similarity=0.124  Sum_probs=54.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCC-------eEEEEecCc--chHHHHHHHhC--CCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHKHGA-------KVCIADVQD--NLGQQVCQSLG--GEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~-------~V~~~~r~~--~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      .|.|+||+|.+|.+++..|++.+.       .+++.+.+.  +.++.+..++.  .......+..- .+.+         
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~---------   74 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-DKEE---------   74 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE-SCHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC-cccc---------
Confidence            689999999999999999987542       245555443  33333322221  11222222221 1111         


Q ss_pred             HHHcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHH
Q 023613           89 VEKFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAA  139 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  139 (280)
                       +.+...|++|..+|....+     ..+.+   +.++.|..-.-.+.+.+.
T Consensus        75 -~~~~~~dvVVitag~~~~~-----g~sr~---dll~~N~~i~k~~~~~i~  116 (154)
T d5mdha1          75 -IAFKDLDVAILVGSMPRRD-----GMERK---DLLKANVKIFKCQGAALD  116 (154)
T ss_dssp             -HHTTTCSEEEECCSCCCCT-----TCCTT---TTHHHHHHHHHHHHHHHH
T ss_pred             -cccCCceEEEEecccCCCC-----CCchh---HHHHHhHHHHHHHHHHHH
Confidence             1224899999999986532     22222   234555544444444443

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.52  E-value=0.16  Score=38.26  Aligned_cols=38  Identities=29%  Similarity=0.391  Sum_probs=33.5

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      .++.||++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            4689999999986 5799999999999999999998853

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.51  E-value=0.19  Score=37.38  Aligned_cols=39  Identities=23%  Similarity=0.191  Sum_probs=34.1

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      ..++.+|++.|. |.|.||+.+++.+...|++|+..++..
T Consensus        39 ~~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          39 SFEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceEEEEe-ecccchhhhhhhcccccceEeeccccc
Confidence            456899999999 567999999999999999999998754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.21  E-value=0.2  Score=33.84  Aligned_cols=69  Identities=12%  Similarity=0.139  Sum_probs=51.7

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +.++.|.| +|=+|+-++....+.|.++++.+.+++.-..   .    .--.++..|..|.+.+.++....     ++|+
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~---~----va~~~i~~~~~d~~~l~~~~~~~-----~~Dv   77 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM---H----VAHRSHVINMLDGDALRRVVELE-----KPHY   77 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG---G----GSSEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh---h----cCCeEEECCCCCHHHHHHHHHhh-----CCce
Confidence            45789998 5679999999999999999999987653111   0    11246778999999988877654     7888


Q ss_pred             EE
Q 023613           98 MV   99 (280)
Q Consensus        98 li   99 (280)
                      +-
T Consensus        78 iT   79 (111)
T d1kjqa2          78 IV   79 (111)
T ss_dssp             EE
T ss_pred             EE
Confidence            73

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.14  E-value=0.38  Score=34.92  Aligned_cols=79  Identities=18%  Similarity=0.254  Sum_probs=58.2

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      .+..+++|.|++ -.|.+-++.....|+.|.+.+.+.+.++++.......  +..   -.++++.+++.++       .-
T Consensus        30 v~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~--~~~---~~~~~~~l~~~~~-------~a   96 (168)
T d1pjca1          30 VKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR--VEL---LYSNSAEIETAVA-------EA   96 (168)
T ss_dssp             BCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG--SEE---EECCHHHHHHHHH-------TC
T ss_pred             CCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc--cee---ehhhhhhHHHhhc-------cC
Confidence            456778888874 6788889999999999999999999998877665532  222   2345655544443       78


Q ss_pred             cEEEECCCCCCC
Q 023613           96 DIMVNNAGISGA  107 (280)
Q Consensus        96 d~li~~ag~~~~  107 (280)
                      |++|..+-+...
T Consensus        97 DivI~aalipG~  108 (168)
T d1pjca1          97 DLLIGAVLVPGR  108 (168)
T ss_dssp             SEEEECCCCTTS
T ss_pred             cEEEEeeecCCc
Confidence            999999987654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.11  E-value=0.18  Score=38.58  Aligned_cols=43  Identities=12%  Similarity=0.104  Sum_probs=36.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~   62 (280)
                      .+++||..|++.|   ..+..|+++|++|+.++-+++.++...+..
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            6889999999987   458889999999999999998887665543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.84  E-value=0.19  Score=34.00  Aligned_cols=36  Identities=22%  Similarity=0.349  Sum_probs=30.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      .|.++|.|| |-+|.++|..|++.|.+|.++.|.+..
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence            477888876 589999999999999999999887753

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.81  E-value=0.17  Score=39.21  Aligned_cols=36  Identities=22%  Similarity=0.389  Sum_probs=31.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~   51 (280)
                      .|++++|+|.| .||+|..++..|++.|-. +.+++.+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            58899999999 578999999999999975 7888764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.038  Score=47.03  Aligned_cols=37  Identities=19%  Similarity=0.325  Sum_probs=31.4

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQD   52 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~   52 (280)
                      .|++..|||.|+ ||+|.++++.|+..|. ++.+++.+.
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            367888999999 6799999999999997 488887753

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.74  E-value=1.3  Score=35.48  Aligned_cols=143  Identities=14%  Similarity=0.098  Sum_probs=80.2

Q ss_pred             CCcEEEEEcCC-ChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhC--C--CCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGA-TGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLG--G--EPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        17 ~~k~vlItGa~-~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~--~--~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      +|++||=..+. |+++.    +.+..|+ .|+.++.+...++...+.+.  .  ..++.++..|+.      ..++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            68999988665 45443    3445677 49999999877776555542  2  246888888863      22444444


Q ss_pred             HcCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchh
Q 023613           91 KFGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTG  170 (280)
Q Consensus        91 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~  170 (280)
                      ...+.|+||..+.....  ..-.-.+   .       ......+++.+++.+..  +|.+++ +|.+...          
T Consensus       214 ~~~~fD~Ii~DPP~f~~--~~~~~~~---~-------~~~~~~L~~~a~~ll~p--gG~l~~-~scs~~~----------  268 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFAR--NKKEVFS---V-------SKDYHKLIRQGLEILSE--NGLIIA-STNAANM----------  268 (317)
T ss_dssp             TTCCEEEEEECCCCC-------CCCC---H-------HHHHHHHHHHHHHTEEE--EEEEEE-EECCTTS----------
T ss_pred             hcCCCCEEEEcChhhcc--chhHHHH---H-------HHHHHHHHHHHHHHcCC--CCEEEE-EeCCccC----------
Confidence            54689999999764432  1111111   1       11234466777777743  455554 4432111          


Q ss_pred             hHHHHHHHHHHHHHHHCCCCeEEEEEe
Q 023613          171 SKHAVLGLNKNVAAELGKYGIRVNCVS  197 (280)
Q Consensus       171 sK~al~~~~~~la~e~~~~gi~v~~v~  197 (280)
                         ..+.|.+.+.......+.++..+.
T Consensus       269 ---~~~~f~~~v~~a~~~~~~~~~~~~  292 (317)
T d2b78a2         269 ---TVSQFKKQIEKGFGKQKHTYLDLQ  292 (317)
T ss_dssp             ---CHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             ---CHHHHHHHHHHHHHHcCCeEEEec
Confidence               123344445555666676666554

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.70  E-value=0.14  Score=35.06  Aligned_cols=37  Identities=27%  Similarity=0.324  Sum_probs=31.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      .+|.++|.|| |-+|.++|..|++.|.+|.++.+.+..
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            3678877775 589999999999999999999987753

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.57  E-value=0.54  Score=35.02  Aligned_cols=39  Identities=21%  Similarity=0.155  Sum_probs=32.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHH
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQ   60 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   60 (280)
                      +.|. |.|-+|..+|..|++.|++|++.+.+++..+.+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            4455 77899999999999999999999999887666543

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.52  E-value=1  Score=33.46  Aligned_cols=143  Identities=14%  Similarity=0.090  Sum_probs=82.5

Q ss_pred             ccCCcEEEEEcC--CChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           15 RLVGRVALITGG--ATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        15 ~l~~k~vlItGa--~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ...|.+++|...  ...+..+++..|.+.|..++.+....+                      .+.+.+   .+.+ ...
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~----------------------~~~~~l---~~~~-~~~   75 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR----------------------CGRDEL---AERL-RSV   75 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT----------------------CCHHHH---HHHH-TTS
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc----------------------cCHHHH---HHHh-hcc
Confidence            345776666643  345788888999999988776543321                      122222   2222 233


Q ss_pred             CCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEccccccccCCCCccchhhH
Q 023613           93 GTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISICSVAGAIGGLGPHAYTGSK  172 (280)
Q Consensus        93 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  172 (280)
                      +.++.||+..+.....   ....+      .....+...+.+.|.+...   ....++.+++...... ..+-..-....
T Consensus        76 ~~~~~vv~l~~~~~~~---~~~~~------~~~~~~~~~l~l~qal~~~---~~~~~l~~vT~~a~~~-~~~d~~~~p~~  142 (209)
T d2fr1a2          76 GEVAGVLSLLAVDEAE---PEEAP------LALASLADTLSLVQAMVSA---ELGCPLWTVTESAVAT-GPFERVRNAAH  142 (209)
T ss_dssp             CCCSEEEECTTTTCCC---CSSCG------GGCHHHHHHHHHHHHHHHT---TCCCCEEEEEESCSCS-STTSCCSCGGG
T ss_pred             CCCCeEEEeCCCCCCC---Ccchh------HHHHHHHHHHHHHHHHHhC---CCCCcEEEEEcCCccc-CCCcccCCHhH
Confidence            6788999987654321   11111      1122355666677776543   3335666665543222 22233445789


Q ss_pred             HHHHHHHHHHHHHHCCCCeEEEEE
Q 023613          173 HAVLGLNKNVAAELGKYGIRVNCV  196 (280)
Q Consensus       173 ~al~~~~~~la~e~~~~gi~v~~v  196 (280)
                      +++-+|+|.++.|+....++...+
T Consensus       143 A~l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         143 GALWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HhHHHHHHHHHHhCCCceEEEEEC
Confidence            999999999999987754555444

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.51  E-value=0.075  Score=38.09  Aligned_cols=41  Identities=17%  Similarity=0.294  Sum_probs=34.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHcC-CeEEEEecCcchHHHHHHHh
Q 023613           21 ALITGGATGIGESTVRLFHKHG-AKVCIADVQDNLGQQVCQSL   62 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~~   62 (280)
                      +.+.|+ |.+|.++++.|.+.| ++|++.+|+++..+.+.+..
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            556666 899999999999887 88999999999888877654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.49  E-value=0.11  Score=41.86  Aligned_cols=75  Identities=21%  Similarity=0.182  Sum_probs=52.0

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcchHH--HHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDNLGQ--QVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .++||+||-.|+++|+   ++..+++.|+ +|++++.++....  +.....+...++.++..|+.+...          .
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            4689999999999886   6777888997 5889988875332  222222334678899888876421          1


Q ss_pred             cCCccEEEECC
Q 023613           92 FGTLDIMVNNA  102 (280)
Q Consensus        92 ~~~~d~li~~a  102 (280)
                      ..+.|+|+...
T Consensus       100 ~~~~D~Ivse~  110 (311)
T d2fyta1         100 VEKVDVIISEW  110 (311)
T ss_dssp             CSCEEEEEECC
T ss_pred             cccceEEEEee
Confidence            24899998753

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.44  E-value=0.32  Score=34.19  Aligned_cols=84  Identities=8%  Similarity=0.022  Sum_probs=59.8

Q ss_pred             CCcEEEEEcCC---ChHHHHHHHHHHHcCCeEEEEecCcchHHH-----HHHHhCCCCCeEEEecCCCCHHHHHHHHHHH
Q 023613           17 VGRVALITGGA---TGIGESTVRLFHKHGAKVCIADVQDNLGQQ-----VCQSLGGEPDTFFCHCDVTKEEDVCSAVDLT   88 (280)
Q Consensus        17 ~~k~vlItGa~---~giG~~la~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   88 (280)
                      +-|++.|.|+|   +..|..+++.|.+.|++|+.+..+.+...-     ...++....+...+   +..++.+..+++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i---~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL---FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE---CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE---EeCHHHHHHHHHHH
Confidence            58999999998   589999999999999999988776432211     12223323344333   34578888889988


Q ss_pred             HHHcCCccEEEECCCCC
Q 023613           89 VEKFGTLDIMVNNAGIS  105 (280)
Q Consensus        89 ~~~~~~~d~li~~ag~~  105 (280)
                      .+.  ++..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            876  577888877753

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.41  E-value=0.15  Score=41.42  Aligned_cols=114  Identities=13%  Similarity=0.037  Sum_probs=69.1

Q ss_pred             CCcEEEEEcCC-ChHHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGA-TGIGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGa~-~giG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .|++||=.++. |+++.+    +++.|+ +|+.++.+++.++...+.+..   ..++.++..|+.+      .+..+...
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            48999988775 555544    345676 599999999877766555432   2467777777532      23344444


Q ss_pred             cCCccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEEEc
Q 023613           92 FGTLDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIISIC  154 (280)
Q Consensus        92 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is  154 (280)
                      ..+.|+||.++.....        +.++....    ......+++.+++.++  ++|.+++.+
T Consensus       215 ~~~fD~Vi~DpP~~~~--------~~~~~~~~----~~~y~~l~~~a~~ll~--pGG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQ--------HEKDLKAG----LRAYFNVNFAGLNLVK--DGGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSCS--------SGGGHHHH----HHHHHHHHHHHHTTEE--EEEEEEEEE
T ss_pred             cCCCCchhcCCccccC--------CHHHHHHH----HHHHHHHHHHHHHHcC--CCcEEEEEe
Confidence            4689999999865432        12222222    2234456677777763  357666654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.13  E-value=0.41  Score=34.32  Aligned_cols=82  Identities=7%  Similarity=0.016  Sum_probs=50.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---C-----CCeEEEecCCCCHHHHHHHHHH---HH
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---E-----PDTFFCHCDVTKEEDVCSAVDL---TV   89 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~-----~~~~~~~~D~~~~~~~~~~~~~---~~   89 (280)
                      +-|. |.|-+|.++|+.|++.|+.|.+.+|+....+.+...-..   .     ...-++..-+.+.+.++.++..   +.
T Consensus         4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~   82 (162)
T d3cuma2           4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLL   82 (162)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHH
T ss_pred             EEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccccc
Confidence            4455 568999999999999999999999998776655433210   0     1112333345666676666544   33


Q ss_pred             HHcCCccEEEECCC
Q 023613           90 EKFGTLDIMVNNAG  103 (280)
Q Consensus        90 ~~~~~~d~li~~ag  103 (280)
                      ....+=+++|.+.-
T Consensus        83 ~~l~~g~iiid~st   96 (162)
T d3cuma2          83 AHIAPGTLVLECST   96 (162)
T ss_dssp             HHSCTTCEEEECSC
T ss_pred             ccCCCCCEEEECCC
Confidence            33333456665553

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.01  E-value=0.3  Score=33.39  Aligned_cols=36  Identities=28%  Similarity=0.386  Sum_probs=30.8

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      ++|.++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            4778888855 59999999999999999999988764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.00  E-value=0.25  Score=33.92  Aligned_cols=35  Identities=17%  Similarity=0.226  Sum_probs=30.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .|.++|.||+ -||.++|..|++.|.+|.++.|.+.
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeeccc
Confidence            4788888876 6999999999999999999999764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.94  E-value=0.29  Score=33.06  Aligned_cols=35  Identities=20%  Similarity=0.217  Sum_probs=29.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            356677665 58999999999999999999988765

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.78  E-value=0.076  Score=38.13  Aligned_cols=38  Identities=8%  Similarity=0.226  Sum_probs=33.7

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC
Q 023613           26 GATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG   63 (280)
Q Consensus        26 a~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~   63 (280)
                      |.|-+|.++++.|.+.|+++++..|+.++.+++.+...
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g   44 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA   44 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccc
Confidence            67899999999999999999999999998888776654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.77  E-value=0.24  Score=33.87  Aligned_cols=35  Identities=26%  Similarity=0.396  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .|.++|.|| |-||.++|..|++.|++|.++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            467777776 58999999999999999999988765

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.65  E-value=0.072  Score=41.57  Aligned_cols=36  Identities=28%  Similarity=0.361  Sum_probs=31.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r   50 (280)
                      .+|+||+++|-| .|.+|..+|+.|.+.|++|+.++-
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            368999999997 889999999999999999987653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.53  E-value=0.068  Score=42.02  Aligned_cols=36  Identities=19%  Similarity=0.303  Sum_probs=31.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r   50 (280)
                      .+++||+++|.| .|.+|+.+|+.|.+.|++|+.++-
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            368999999998 799999999999999999887643

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=92.52  E-value=0.74  Score=30.99  Aligned_cols=82  Identities=17%  Similarity=0.156  Sum_probs=56.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      ||++||.=-..-+-..+...|.+.|+.|+....+....-+..+...  .++.++..++.+.+. -.+++++++....+-+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~--~dliilD~~mp~~~G-~e~~~~ir~~~~~~pv   77 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELK--PDIVTMDITMPEMNG-IDAIKEIMKIDPNAKI   77 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--CSEEEEECSCGGGCH-HHHHHHHHHHCTTCCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhcc--CCEEEEecCCCCCCH-HHHHHHHHHhCCCCcE
Confidence            7899999999999999999999999999866555433333333322  466666666655543 4567777777666666


Q ss_pred             EEECC
Q 023613           98 MVNNA  102 (280)
Q Consensus        98 li~~a  102 (280)
                      ++..+
T Consensus        78 i~ls~   82 (118)
T d1u0sy_          78 IVCSA   82 (118)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            66543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.39  E-value=0.14  Score=39.48  Aligned_cols=73  Identities=15%  Similarity=0.043  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      ..|++|=.||++|   .++..|+++|++|++++.+++-++...+.... +.++.++..|+.+..           .-++.
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-----------~~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-----------FKNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-----------CCSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc-----------ccccc
Confidence            4678999999987   44667889999999999998776655554432 346888888876531           11478


Q ss_pred             cEEEECCC
Q 023613           96 DIMVNNAG  103 (280)
Q Consensus        96 d~li~~ag  103 (280)
                      |.+++.-+
T Consensus       107 D~I~~~~~  114 (251)
T d1wzna1         107 DAVTMFFS  114 (251)
T ss_dssp             EEEEECSS
T ss_pred             chHhhhhh
Confidence            98887643

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.35  E-value=0.3  Score=33.11  Aligned_cols=35  Identities=14%  Similarity=0.163  Sum_probs=29.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            467777776 58999999999999999999998764

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.13  E-value=0.81  Score=33.57  Aligned_cols=85  Identities=21%  Similarity=0.176  Sum_probs=54.3

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHH---------------HH
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEE---------------DV   81 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---------------~~   81 (280)
                      +.-.|+|.||+ -.|.+-++-....|+.|.+.+.+.+.++++.+....     ++..+..+.+               ..
T Consensus        28 ~pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~-----~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          28 PPARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGK-----FITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCE-----ECCC-----------------------
T ss_pred             CCcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcc-----eEEEeccccccccccccchhhcCHHHH
Confidence            44577888764 678888999999999999999999988887654331     2222211111               11


Q ss_pred             HHHHHHHHHHcCCccEEEECCCCCCC
Q 023613           82 CSAVDLTVEKFGTLDIMVNNAGISGA  107 (280)
Q Consensus        82 ~~~~~~~~~~~~~~d~li~~ag~~~~  107 (280)
                      .+.-+.+.+....-|++|..+-+...
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCCc
Confidence            12233344445689999999987654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.10  E-value=0.071  Score=39.88  Aligned_cols=42  Identities=17%  Similarity=0.329  Sum_probs=34.8

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHH
Q 023613           19 RVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQS   61 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~   61 (280)
                      +.+.|.||+ ..|.++|..|++.|++|.+.+|+++..+.+.+.
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            457788775 589999999999999999999998877766543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.01  E-value=0.16  Score=36.31  Aligned_cols=39  Identities=15%  Similarity=0.153  Sum_probs=31.7

Q ss_pred             CCcEEEEE-cCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023613           17 VGRVALIT-GGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        17 ~~k~vlIt-Ga~~giG~~la~~l~~~g~~V~~~~r~~~~~   55 (280)
                      .++.++|. .+++-||.++|..|+++|++|.++.+.+..+
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~   77 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLAN   77 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccc
Confidence            46666665 4668999999999999999999999876543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.88  E-value=0.39  Score=32.73  Aligned_cols=33  Identities=12%  Similarity=0.144  Sum_probs=27.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecC
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~   51 (280)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            355667665 589999999999999999998875

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.84  E-value=0.062  Score=36.12  Aligned_cols=39  Identities=21%  Similarity=0.312  Sum_probs=32.0

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .+++||+|+|.|++ --|..+|..|++.+.+++...|+..
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            46899999999987 6788899999999888777666543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=91.51  E-value=0.14  Score=40.07  Aligned_cols=73  Identities=21%  Similarity=0.214  Sum_probs=51.5

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-CCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-PDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+|+++|=.|+++|+   ++..+++.|++|+.++.++...+...+....+ ....++..|+.+          . -..++
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~----------~-~~~~~  184 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA----------A-LPFGP  184 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH----------H-GGGCC
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc----------c-ccccc
Confidence            579999999999986   33456788999999999998887766544322 355667666421          1 11268


Q ss_pred             ccEEEECC
Q 023613           95 LDIMVNNA  102 (280)
Q Consensus        95 ~d~li~~a  102 (280)
                      .|+++.|.
T Consensus       185 fD~V~ani  192 (254)
T d2nxca1         185 FDLLVANL  192 (254)
T ss_dssp             EEEEEEEC
T ss_pred             cchhhhcc
Confidence            99998773

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.50  E-value=1.5  Score=34.95  Aligned_cols=79  Identities=16%  Similarity=0.016  Sum_probs=53.4

Q ss_pred             CCcEEEEEcCCCh-HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CC-CCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           17 VGRVALITGGATG-IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GE-PDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        17 ~~k~vlItGa~~g-iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      ++++||=..+.+| ++.    .+++.|++|+.++.+...++...+.+.   -. .++.++..|+.      +++++....
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            5788887766554 333    345679999999999887776655432   12 35788877763      335555555


Q ss_pred             cCCccEEEECCCCC
Q 023613           92 FGTLDIMVNNAGIS  105 (280)
Q Consensus        92 ~~~~d~li~~ag~~  105 (280)
                      ..+.|+||.+....
T Consensus       202 ~~~fD~IilDPP~f  215 (309)
T d2igta1         202 GSTYDIILTDPPKF  215 (309)
T ss_dssp             TCCBSEEEECCCSE
T ss_pred             CCCCCEEEECCCcc
Confidence            56899999997644

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.41  E-value=0.34  Score=39.01  Aligned_cols=74  Identities=19%  Similarity=0.157  Sum_probs=50.2

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcchHHHHHHH---hCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDNLGQQVCQS---LGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      .++||+||-.|+++|+   ++..+++.|++ |+.++.++. .....+.   -+...++.++..|+.+.+.          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            3589999999999885   56778888864 888987754 2222222   2223578888888876421          


Q ss_pred             HcCCccEEEECC
Q 023613           91 KFGTLDIMVNNA  102 (280)
Q Consensus        91 ~~~~~d~li~~a  102 (280)
                      ...+.|+++...
T Consensus        97 ~~~~~D~ivs~~  108 (316)
T d1oria_          97 PVEKVDIIISEW  108 (316)
T ss_dssp             SSSCEEEEEECC
T ss_pred             ccceeEEEeeee
Confidence            124789998764

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=91.35  E-value=0.32  Score=37.17  Aligned_cols=76  Identities=18%  Similarity=0.090  Sum_probs=55.4

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.+||-.|+++|--.+   .|++.+.+|+.+..+++..+...+.+....++.++..|...-          ....++.|
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g----------~~~~~pfD  136 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG----------YEEEKPYD  136 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC----------CGGGCCEE
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhc----------chhhhhHH
Confidence            58899999999886444   455666789999999887777666666556888888886431          01125789


Q ss_pred             EEEECCCCC
Q 023613           97 IMVNNAGIS  105 (280)
Q Consensus        97 ~li~~ag~~  105 (280)
                      .++.+++..
T Consensus       137 ~Iiv~~a~~  145 (224)
T d1vbfa_         137 RVVVWATAP  145 (224)
T ss_dssp             EEEESSBBS
T ss_pred             HHHhhcchh
Confidence            999888753

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.85  E-value=1.2  Score=31.46  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=34.7

Q ss_pred             cEEEEEcCCChHHHHHHHHHHHcC--CeEEE--EecCcchHHHHHHHhC
Q 023613           19 RVALITGGATGIGESTVRLFHKHG--AKVCI--ADVQDNLGQQVCQSLG   63 (280)
Q Consensus        19 k~vlItGa~~giG~~la~~l~~~g--~~V~~--~~r~~~~~~~~~~~~~   63 (280)
                      |++.|.|+||.||.....-..++.  .+|+.  +.++-+.+.+.+.+.+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~   50 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFS   50 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHh
Confidence            679999999999999999888873  55654  4556677777766666

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.77  E-value=0.17  Score=40.35  Aligned_cols=36  Identities=19%  Similarity=0.329  Sum_probs=31.7

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEec
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADV   50 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r   50 (280)
                      .+|+||+++|-|- |.+|+.+|+.|.+.|++|+.++-
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            4689999999886 79999999999999999987653

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.75  E-value=1.1  Score=30.22  Aligned_cols=81  Identities=14%  Similarity=0.118  Sum_probs=54.0

Q ss_pred             cEEEEEcCC---ChHHHHHHHHHHHcCCeEEEEecCcchHHH-----HHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHH
Q 023613           19 RVALITGGA---TGIGESTVRLFHKHGAKVCIADVQDNLGQQ-----VCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVE   90 (280)
Q Consensus        19 k~vlItGa~---~giG~~la~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   90 (280)
                      |.+.|.|+|   +..|..+.+.|.+.|++|+.+..+.+....     ...++....+..++   ...++.+..+++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi---~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF---VVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE---CSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE---EeCHHHHHHHHHHHHh
Confidence            789999998   569999999999999999888765432211     12223333344433   3457778888888776


Q ss_pred             HcCCccEEEECCCC
Q 023613           91 KFGTLDIMVNNAGI  104 (280)
Q Consensus        91 ~~~~~d~li~~ag~  104 (280)
                      .  ++..++...|.
T Consensus        79 ~--g~k~v~~~~g~   90 (116)
T d1y81a1          79 A--GFKKLWFQPGA   90 (116)
T ss_dssp             T--TCCEEEECTTS
T ss_pred             c--CCceEEeccch
Confidence            5  56667665553

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=90.72  E-value=0.26  Score=35.62  Aligned_cols=38  Identities=21%  Similarity=0.448  Sum_probs=33.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .+.||+++|.| -+-+|+.+|++|...|++|+++..++-
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCch
Confidence            47899998887 567999999999999999999999874

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.61  E-value=0.48  Score=38.24  Aligned_cols=74  Identities=20%  Similarity=0.275  Sum_probs=49.6

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCC-eEEEEecCcc--hHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGA-KVCIADVQDN--LGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKF   92 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   92 (280)
                      ++||+||-.|++.|+   ++..++++|+ +|++++.++.  ...+..+..+...++.++..|+.+.+          -..
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~~  103 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH----------LPF  103 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CSS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhcc----------Ccc
Confidence            589999999999884   4667788887 5888887752  22222233333467888998887632          011


Q ss_pred             CCccEEEECC
Q 023613           93 GTLDIMVNNA  102 (280)
Q Consensus        93 ~~~d~li~~a  102 (280)
                      .+.|+++...
T Consensus       104 ~~~D~i~se~  113 (328)
T d1g6q1_         104 PKVDIIISEW  113 (328)
T ss_dssp             SCEEEEEECC
T ss_pred             cceeEEEEEe
Confidence            4789988764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.55  E-value=0.43  Score=32.55  Aligned_cols=36  Identities=14%  Similarity=0.323  Sum_probs=30.9

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|.+..
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            567777776 589999999999999999999987753

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.43  E-value=0.18  Score=40.34  Aligned_cols=24  Identities=17%  Similarity=0.117  Sum_probs=21.0

Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecC
Q 023613           28 TGIGESTVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        28 ~giG~~la~~l~~~g~~V~~~~r~   51 (280)
                      |..|.++|+.|..+|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            468999999999999999988654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.33  E-value=0.24  Score=35.22  Aligned_cols=37  Identities=8%  Similarity=0.046  Sum_probs=29.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHH
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQV   58 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~   58 (280)
                      +-|. |.|-+|.++++.|.++|+.|+..+++.......
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            3444 559999999999999999999988876655443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.17  E-value=0.27  Score=33.32  Aligned_cols=37  Identities=14%  Similarity=0.250  Sum_probs=31.3

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      ..+|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            34788887775 58999999999999999999988764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.10  E-value=0.22  Score=34.04  Aligned_cols=35  Identities=23%  Similarity=0.192  Sum_probs=29.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      +|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            467777665 68999999999999999999988653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.05  E-value=0.17  Score=37.19  Aligned_cols=35  Identities=14%  Similarity=0.176  Sum_probs=29.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAK-VCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~~~   53 (280)
                      +|+|+|.|| |-.|...|..|+++|++ |.++.|.+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            678888886 47899999999999985 888888654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=89.66  E-value=0.27  Score=37.46  Aligned_cols=34  Identities=21%  Similarity=0.279  Sum_probs=28.8

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      .|.|+|.||+ -.|.++|..|+++|++|.++.|+.
T Consensus         6 ~~kVvVIGaG-iaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGSG-VIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECcc-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5568888764 788999999999999999999864

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=89.63  E-value=0.19  Score=39.21  Aligned_cols=34  Identities=15%  Similarity=0.274  Sum_probs=28.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      +|+|+|.||+ --|...|..|++.|++|.+..+++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5888999765 567888999999999999998754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.50  E-value=0.38  Score=36.33  Aligned_cols=79  Identities=16%  Similarity=0.233  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|.+||-.|+++|--.++...+.....+|+.++.+++..+...+.+..  ..++.++..|..+.          ....++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~----------~~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG----------VPEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc----------cccccc
Confidence            588999999998877776666666667899999998877776665532  24677777775431          112257


Q ss_pred             ccEEEECCCCC
Q 023613           95 LDIMVNNAGIS  105 (280)
Q Consensus        95 ~d~li~~ag~~  105 (280)
                      .|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            99999888653

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=89.48  E-value=0.18  Score=36.53  Aligned_cols=80  Identities=11%  Similarity=0.217  Sum_probs=51.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHc-CCeEE-EEecCcchH-H----HHH-------------HHhCCCCCeEEEecCCCCHH
Q 023613           20 VALITGGATGIGESTVRLFHKH-GAKVC-IADVQDNLG-Q----QVC-------------QSLGGEPDTFFCHCDVTKEE   79 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~-g~~V~-~~~r~~~~~-~----~~~-------------~~~~~~~~~~~~~~D~~~~~   79 (280)
                      .+.|.|++|.+|+++++...+. ++.++ +++|..... .    +..             +......+   +..|++.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D---ViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD---VFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS---EEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc---eEEEeccHH
Confidence            5899999999999999999876 56654 344432110 0    000             00111122   336999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEECCCC
Q 023613           80 DVCSAVDLTVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        80 ~~~~~~~~~~~~~~~~d~li~~ag~  104 (280)
                      .....++...+.  ++..|+-..|.
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHhc--cceeEEecCCC
Confidence            999888877665  77788776664

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.47  E-value=0.33  Score=32.96  Aligned_cols=35  Identities=20%  Similarity=0.251  Sum_probs=30.0

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .|.++|.|| |-||-++|..|++.|++|.++.+.+.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            577888876 58999999999999999999887654

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.26  E-value=0.19  Score=38.09  Aligned_cols=39  Identities=13%  Similarity=0.145  Sum_probs=32.8

Q ss_pred             ccccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           13 VQRLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        13 ~~~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      ..+++||.|+|.|++. -|-.+|..+++.+++++.+.|+.
T Consensus        27 ~~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          27 PVDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence            3468999999998875 48999999999999988877764

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.24  E-value=0.12  Score=38.78  Aligned_cols=32  Identities=16%  Similarity=0.240  Sum_probs=27.8

Q ss_pred             cEEEEEcCCChHHHH-----HHHHHHHcCCeEEEEec
Q 023613           19 RVALITGGATGIGES-----TVRLFHKHGAKVCIADV   50 (280)
Q Consensus        19 k~vlItGa~~giG~~-----la~~l~~~g~~V~~~~r   50 (280)
                      |.+.|||.++|.|+.     +|+.|+++|.+|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            789999999999985     67899999999998763

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=89.00  E-value=0.54  Score=34.49  Aligned_cols=40  Identities=15%  Similarity=0.227  Sum_probs=33.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchH
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLG   55 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~   55 (280)
                      ..++|.|+|.||+ .-|.+.|..|+++|++|.+..+++...
T Consensus        40 ~~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~~~G   79 (179)
T d1ps9a3          40 AVQKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHSEIG   79 (179)
T ss_dssp             CSSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred             CCCCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccCccC
Confidence            3568999999875 678999999999999999999986543

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.84  E-value=0.51  Score=35.76  Aligned_cols=78  Identities=15%  Similarity=0.133  Sum_probs=57.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      +|.+||..|+++|--.++...++  |.+|+.+.++++..+...+.+..  -.++.++..|..+-          ....++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccCc
Confidence            58899999999999988888877  46799999997766655444432  25788999987531          112368


Q ss_pred             ccEEEECCCCCC
Q 023613           95 LDIMVNNAGISG  106 (280)
Q Consensus        95 ~d~li~~ag~~~  106 (280)
                      .|.++.+++...
T Consensus       146 fD~Iiv~~a~~~  157 (215)
T d1jg1a_         146 YDVIIVTAGAPK  157 (215)
T ss_dssp             EEEEEECSBBSS
T ss_pred             ceeEEeeccccc
Confidence            999999888754

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.84  E-value=0.27  Score=36.10  Aligned_cols=33  Identities=18%  Similarity=0.248  Sum_probs=27.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .+.|.|+ |..|.++|..|++.|.+|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            3566666 78999999999999999999998644

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.40  E-value=0.4  Score=33.23  Aligned_cols=37  Identities=19%  Similarity=0.226  Sum_probs=31.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      .+|.++|.|| |-+|.++|..|++.|.+|.++.+.+..
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            4788888865 689999999999999999999887653

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=88.35  E-value=0.21  Score=38.46  Aligned_cols=104  Identities=13%  Similarity=0.063  Sum_probs=68.9

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .+++++|=.|++.|.   ++..|++.|.+|++++.+++-++...+.... ..++.++..|+.+.+           ..++
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~~  101 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INRK  101 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSCC
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------cccc
Confidence            457899999999885   7888899999999999999877665444322 246888888876531           1257


Q ss_pred             ccEEEECCCCCCCCCCCCCCCCHHHHHHHhhhhhHhHHHHHHHHHHhcccCCCceEEE
Q 023613           95 LDIMVNNAGISGAPCPDIREADLSEFEKVFDINVKGVFHGMKHAARIMIPQTKGTIIS  152 (280)
Q Consensus        95 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~  152 (280)
                      .|++++..+....      -.+.++.++.           ++.+...|+  ++|.+++
T Consensus       102 fD~i~~~~~~~~~------~~~~~~~~~~-----------l~~~~~~Lk--pgG~~i~  140 (246)
T d1y8ca_         102 FDLITCCLDSTNY------IIDSDDLKKY-----------FKAVSNHLK--EGGVFIF  140 (246)
T ss_dssp             EEEEEECTTGGGG------CCSHHHHHHH-----------HHHHHTTEE--EEEEEEE
T ss_pred             ccccceeeeeeec------cCCHHHHHHH-----------HHHHHHhCC--CCeEEEE
Confidence            9998876543321      1234444433           455666663  3577665

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.26  E-value=1.5  Score=29.95  Aligned_cols=76  Identities=14%  Similarity=0.128  Sum_probs=50.7

Q ss_pred             CcEEEEEcCCC-h---------HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023613           18 GRVALITGGAT-G---------IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        18 ~k~vlItGa~~-g---------iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      -|.+||.|++. -         -+.+.+++|.++|++++++..+++....-.+.   ..++.+   +--+.+++.++++.
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~---aD~lYf---ePlt~e~v~~Ii~~   80 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM---ADATYI---EPIHWEVVRKIIEK   80 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG---SSEEEC---SCCCHHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh---cceeee---ecCCHHHHHHHHHH
Confidence            57899998853 3         34667889999999999999888764321111   123333   33456777666664


Q ss_pred             HHHHcCCccEEEECCCC
Q 023613           88 TVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~  104 (280)
                      =     ++|.++-..|.
T Consensus        81 E-----~pd~il~~~GG   92 (127)
T d1a9xa3          81 E-----RPDAVLPTMGG   92 (127)
T ss_dssp             H-----CCSEEECSSSH
T ss_pred             h-----CcCCeEEEeee
Confidence            2     89999877764

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=88.15  E-value=0.91  Score=35.59  Aligned_cols=78  Identities=17%  Similarity=0.167  Sum_probs=51.4

Q ss_pred             CcEEEEEcCCChH-HHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC---CCCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           18 GRVALITGGATGI-GESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG---GEPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlItGa~~gi-G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .++++-.|+++|+ +.+++ .  ...++|++++.+++.++-..+..+   -..++.+...|+.+.         ..+..+
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTT
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccC
Confidence            4566666666664 44433 2  346789999999987776555443   234667778888643         223447


Q ss_pred             CccEEEECCCCCCC
Q 023613           94 TLDIMVNNAGISGA  107 (280)
Q Consensus        94 ~~d~li~~ag~~~~  107 (280)
                      ++|++|.|..+...
T Consensus       179 ~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         179 SIEMILSNPPYVKS  192 (271)
T ss_dssp             TCCEEEECCCCBCG
T ss_pred             cccEEEEcccccCc
Confidence            99999999987743

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.94  E-value=0.75  Score=34.07  Aligned_cols=79  Identities=13%  Similarity=0.125  Sum_probs=58.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC-CCCeEEEecCCCCHHHHHHHHHHHHHHcCCccEEE
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG-EPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDIMV   99 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li   99 (280)
                      +=+|.|+||.-.++.+.+ . +.+|++++++++.++...+.++. ..++.++..++.+...+   +....  .+++|.++
T Consensus        28 lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~--~~~vdgIl  100 (192)
T d1m6ya2          28 LDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG--IEKVDGIL  100 (192)
T ss_dssp             EETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT--CSCEEEEE
T ss_pred             EEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC--CCCcceee
Confidence            335777888888888877 3 46899999999988887776654 35789999988764332   22211  25899999


Q ss_pred             ECCCCCC
Q 023613          100 NNAGISG  106 (280)
Q Consensus       100 ~~ag~~~  106 (280)
                      ...|+.+
T Consensus       101 ~DlGvSs  107 (192)
T d1m6ya2         101 MDLGVST  107 (192)
T ss_dssp             EECSCCH
T ss_pred             eccchhH
Confidence            9999854

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.94  E-value=1.2  Score=33.82  Aligned_cols=79  Identities=16%  Similarity=0.163  Sum_probs=55.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.+||=.|+++|-=..........+-.|+.++.++..++.+.+..+.......+..|..+++...       .....+|
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~-------~~~~~vD  145 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYR-------ALVPKVD  145 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGT-------TTCCCEE
T ss_pred             CCCEEEEeccCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccccc-------ccccceE
Confidence            588999999987654433333443445899999999998888877776677888888888765431       1124788


Q ss_pred             EEEECC
Q 023613           97 IMVNNA  102 (280)
Q Consensus        97 ~li~~a  102 (280)
                      ++++..
T Consensus       146 ~i~~d~  151 (227)
T d1g8aa_         146 VIFEDV  151 (227)
T ss_dssp             EEEECC
T ss_pred             EEEEEc
Confidence            887654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.81  E-value=1.8  Score=30.35  Aligned_cols=76  Identities=11%  Similarity=0.076  Sum_probs=50.6

Q ss_pred             ccCCcEEEEEcCCCh-HHHHHHHHHHHcCC-eEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           15 RLVGRVALITGGATG-IGESTVRLFHKHGA-KVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        15 ~l~~k~vlItGa~~g-iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      +++|+.+|=.|+++| +|.    ..+.+|+ +|+.++.+.+..+.+.+.+..   ..++.++..|..+      ++   .
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---D   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---H
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---c
Confidence            468999988877655 554    3456776 599999998877665555432   3568888888432      12   2


Q ss_pred             HHcCCccEEEECCC
Q 023613           90 EKFGTLDIMVNNAG  103 (280)
Q Consensus        90 ~~~~~~d~li~~ag  103 (280)
                      ...++.|+++.++.
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            22358999988763

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.73  E-value=0.24  Score=38.83  Aligned_cols=37  Identities=16%  Similarity=0.233  Sum_probs=31.8

Q ss_pred             CCcEEEEEcCCChHHHHH-----HHHHHHcCCeEEEEecCcc
Q 023613           17 VGRVALITGGATGIGEST-----VRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~l-----a~~l~~~g~~V~~~~r~~~   53 (280)
                      .++.++|+.|-||.|+..     |..|++.|.+|++++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            478888888899999976     7899999999999998864

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.71  E-value=1.3  Score=32.18  Aligned_cols=74  Identities=18%  Similarity=0.115  Sum_probs=51.1

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCC---CCCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGG---EPDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +|.++|=.|+++|   .++..+++.+.+|+.++.+++.++...+.++.   ..++.++.+|..          +......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            5888888899877   33445667788999999999877766655432   257888888742          1112235


Q ss_pred             CccEEEECCC
Q 023613           94 TLDIMVNNAG  103 (280)
Q Consensus        94 ~~d~li~~ag  103 (280)
                      ..|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            8899987653

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.70  E-value=0.67  Score=34.54  Aligned_cols=73  Identities=16%  Similarity=0.077  Sum_probs=51.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhC-CCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLG-GEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      +.+||=.||++|.   ++..|++.|++|++++.+++.++...+... ....+.++..|..+..          ...+..|
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~----------~~~~~fD  104 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------FEDKTFD  104 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC----------SCTTCEE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc----------ccCcCce
Confidence            5578999999887   667888999999999999887766555442 2245677777776521          0114789


Q ss_pred             EEEECCC
Q 023613           97 IMVNNAG  103 (280)
Q Consensus        97 ~li~~ag  103 (280)
                      +|+....
T Consensus       105 ~I~~~~~  111 (226)
T d1ve3a1         105 YVIFIDS  111 (226)
T ss_dssp             EEEEESC
T ss_pred             EEEEecc
Confidence            9887654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.44  E-value=0.81  Score=33.65  Aligned_cols=75  Identities=13%  Similarity=0.055  Sum_probs=52.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC--CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE--PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      ++++.||=.|++.|.   .+..|+++|++|+.++-+++.++...+.....  ..+.+...|+.+..           .-+
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----------~~~   94 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----------FDG   94 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----------CCC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----------ccc
Confidence            456789999997554   56688899999999999988777655443321  35677778876532           014


Q ss_pred             CccEEEECCCC
Q 023613           94 TLDIMVNNAGI  104 (280)
Q Consensus        94 ~~d~li~~ag~  104 (280)
                      ..|+|+.+...
T Consensus        95 ~fD~I~~~~~~  105 (198)
T d2i6ga1          95 EYDFILSTVVM  105 (198)
T ss_dssp             CEEEEEEESCG
T ss_pred             cccEEEEeeee
Confidence            78988876643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.32  E-value=0.28  Score=38.82  Aligned_cols=36  Identities=17%  Similarity=0.281  Sum_probs=29.9

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      ..|.|+|.||+ --|...|..|+++|++|++..+++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            46789999886 4488899999999999999987653

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.16  E-value=2.3  Score=29.04  Aligned_cols=84  Identities=15%  Similarity=0.183  Sum_probs=55.2

Q ss_pred             cCCcEEEEEcCC---ChHHHHHHHHHHHcC-CeEEEEecCcchHHH--H---HHHhCCCCCeEEEecCCCCHHHHHHHHH
Q 023613           16 LVGRVALITGGA---TGIGESTVRLFHKHG-AKVCIADVQDNLGQQ--V---CQSLGGEPDTFFCHCDVTKEEDVCSAVD   86 (280)
Q Consensus        16 l~~k~vlItGa~---~giG~~la~~l~~~g-~~V~~~~r~~~~~~~--~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~   86 (280)
                      ++-|.+.|.|+|   +..|..+.+.|.+.| .+|+.+..+.+....  .   ..++....+..++   ....+.+.++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi---~vp~~~~~~~~~   82 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII---VVPKRFVKDTLI   82 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE---CSCHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE---ecChHHhHHHHH
Confidence            678999999999   789999999987766 578888766432211  1   1122222344444   345788888899


Q ss_pred             HHHHHcCCcc-EEEECCCC
Q 023613           87 LTVEKFGTLD-IMVNNAGI  104 (280)
Q Consensus        87 ~~~~~~~~~d-~li~~ag~  104 (280)
                      ++.+.  ++. +++..+|+
T Consensus        83 ~~~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          83 QCGEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHHHH--TCCEEEECCCSS
T ss_pred             HHHHc--CCCEEEEecccc
Confidence            88877  454 45555554

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.99  E-value=1.6  Score=30.77  Aligned_cols=80  Identities=8%  Similarity=0.050  Sum_probs=49.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC-------CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE-------PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +-+.|- |-+|..+|++|++.|+.+ ...|+.++..+..+.....       .....+...+.+.+.+......+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445555 889999999999988765 5677766666655543210       1222333345567777777777766544


Q ss_pred             CccEEEECC
Q 023613           94 TLDIMVNNA  102 (280)
Q Consensus        94 ~~d~li~~a  102 (280)
                      +-.++|.+.
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            555555554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.98  E-value=0.44  Score=32.69  Aligned_cols=35  Identities=23%  Similarity=0.372  Sum_probs=30.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.+.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            677888876 58999999999999999999988654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=86.82  E-value=0.37  Score=34.48  Aligned_cols=35  Identities=17%  Similarity=0.393  Sum_probs=28.6

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCC--eEEEEecCc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGA--KVCIADVQD   52 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~--~V~~~~r~~   52 (280)
                      .||+++|.||+ -.|.++|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            48999999986 558999999999874  688877664

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=86.58  E-value=0.54  Score=37.47  Aligned_cols=35  Identities=20%  Similarity=0.358  Sum_probs=24.5

Q ss_pred             cEEEEEcCCCh--H--HHHHHHHHHHcCCeEEEEecCcc
Q 023613           19 RVALITGGATG--I--GESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        19 k~vlItGa~~g--i--G~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      |++||++|++|  +  ..+|+++|.++|+.|..++....
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~   39 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR   39 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence            56777765544  2  34688999999999987665443

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.37  E-value=0.48  Score=36.41  Aligned_cols=35  Identities=17%  Similarity=0.224  Sum_probs=29.8

Q ss_pred             cccCCcEEEEEcCCChHHHHHHHHHHH-cCCeEEEEe
Q 023613           14 QRLVGRVALITGGATGIGESTVRLFHK-HGAKVCIAD   49 (280)
Q Consensus        14 ~~l~~k~vlItGa~~giG~~la~~l~~-~g~~V~~~~   49 (280)
                      .+++||+++|-| .|.+|+.+|+.|++ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            368899999886 88999999999986 599988765

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.34  E-value=0.61  Score=35.41  Aligned_cols=37  Identities=22%  Similarity=0.357  Sum_probs=31.1

Q ss_pred             cCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           16 LVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        16 l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      -.+|.++|.||+ -.|...|..|+++|++|.++.++..
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence            468999999886 4588999999999999999987654

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.14  E-value=0.42  Score=41.48  Aligned_cols=36  Identities=17%  Similarity=0.163  Sum_probs=30.3

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCe-EEEEecC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAK-VCIADVQ   51 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~-V~~~~r~   51 (280)
                      .|+..+|+|.|+ +|+|.++++.|+..|.. +.+++.+
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            467889999997 79999999999999964 7787653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=86.04  E-value=1.1  Score=31.74  Aligned_cols=46  Identities=20%  Similarity=0.230  Sum_probs=34.5

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc--CCeEEE--EecCcchHHHHHHHhC
Q 023613           18 GRVALITGGATGIGESTVRLFHKH--GAKVCI--ADVQDNLGQQVCQSLG   63 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~--g~~V~~--~~r~~~~~~~~~~~~~   63 (280)
                      .|++.|.|+||.||.....-+.++  .++|++  +.++-+.+.+.+++.+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~   51 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTN   51 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhc
Confidence            489999999999999999988876  466654  3455566666666555

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.82  E-value=0.32  Score=36.70  Aligned_cols=78  Identities=12%  Similarity=0.097  Sum_probs=52.5

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLD   96 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   96 (280)
                      .|.+||=.|+++|.-...+..+...| +|+.++-+++.++.+.+..+...++.++..|..++....       ..+..+|
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~-------~~~~~vd  127 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS-------GIVEKVD  127 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT-------TTCCCEE
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccc-------cccceEE
Confidence            48899999999885443333344444 899999999888877666554567888888887754321       1223677


Q ss_pred             EEEECC
Q 023613           97 IMVNNA  102 (280)
Q Consensus        97 ~li~~a  102 (280)
                      ++++..
T Consensus       128 ~v~~~~  133 (209)
T d1nt2a_         128 LIYQDI  133 (209)
T ss_dssp             EEEECC
T ss_pred             EEEecc
Confidence            766643

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.77  E-value=2.4  Score=28.18  Aligned_cols=35  Identities=20%  Similarity=0.205  Sum_probs=27.4

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcC---CeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHG---AKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g---~~V~~~~r~~~   53 (280)
                      .|.++|.|| |.+|.++|..|.+.|   .+|.++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            578888888 899999997777654   56988888654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=85.62  E-value=0.57  Score=35.79  Aligned_cols=35  Identities=14%  Similarity=0.228  Sum_probs=28.1

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .++|+|.||+ --|..+|..|+++|.+|++..|+++
T Consensus         4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4568888775 5677888899999999999988654

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.50  E-value=1.7  Score=37.00  Aligned_cols=80  Identities=13%  Similarity=0.098  Sum_probs=49.8

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCC
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGT   94 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   94 (280)
                      .|.||++.|.|+. ....++++.|.+.|..|+.++..........+.......-..+ .|=.+..++.+++++.     +
T Consensus       342 ~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~~i-~~d~~~~el~~~i~~~-----~  414 (477)
T d1m1na_         342 RLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLL-YDDVTGYEFEEFVKRI-----K  414 (477)
T ss_dssp             HHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTCEE-EESCBHHHHHHHHHHH-----C
T ss_pred             hhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCcEE-ecCCCHHHHHHHHHhc-----C
Confidence            4789999998764 5778899999889999888765443333222222211111122 2334566676666654     8


Q ss_pred             ccEEEEC
Q 023613           95 LDIMVNN  101 (280)
Q Consensus        95 ~d~li~~  101 (280)
                      +|+++-+
T Consensus       415 pDL~ig~  421 (477)
T d1m1na_         415 PDLIGSG  421 (477)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEC
Confidence            9998744

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=85.40  E-value=0.18  Score=36.80  Aligned_cols=75  Identities=17%  Similarity=0.276  Sum_probs=40.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHH-c----CCeEEEEecCcchHHHHHHHhCC-----CCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVRLFHK-H----GAKVCIADVQDNLGQQVCQSLGG-----EPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~-~----g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+.|.||++.....+...+.. .    +..+++.+.++++++...+.+..     .....+...  +|.++         
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~e---------   73 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPEE---------   73 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHHH---------
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChhh---------
Confidence            466777765433333344443 2    23699999999887644333311     122233222  12221         


Q ss_pred             HHcCCccEEEECCCCCC
Q 023613           90 EKFGTLDIMVNNAGISG  106 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~~  106 (280)
                       ....-|+||+.+|...
T Consensus        74 -al~~AD~Vvitag~~~   89 (167)
T d1u8xx1          74 -AFTDVDFVMAHIRVGK   89 (167)
T ss_dssp             -HHSSCSEEEECCCTTH
T ss_pred             -ccCCCCEEEECCCcCC
Confidence             1248999999999753

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.10  E-value=4.7  Score=28.31  Aligned_cols=82  Identities=18%  Similarity=0.225  Sum_probs=54.0

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCC---CCeEEEecCCCCHHHHHHHHHHHHHHcC
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGE---PDTFFCHCDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      +|+++.|.+.++|.|.-++-.+.+.|.++  ..-+++..+++.+.+-..   .+..-+..+ .+.+...+.++.+.+. +
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~~d-~   77 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLLQD-P   77 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHHHS-T
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHHcC-C
Confidence            58999999999999999999999998554  444555555555555322   222223333 3566777777666553 5


Q ss_pred             CccEEEECC
Q 023613           94 TLDIMVNNA  102 (280)
Q Consensus        94 ~~d~li~~a  102 (280)
                      .+|.++...
T Consensus        78 ~vd~v~v~~   86 (163)
T d2csua3          78 NVDMLIAIC   86 (163)
T ss_dssp             TCSEEEEEE
T ss_pred             CcCEEEEee
Confidence            788766544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.79  E-value=0.51  Score=35.28  Aligned_cols=31  Identities=26%  Similarity=0.217  Sum_probs=26.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           21 ALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      |+|.| +|--|..+|..|+++|.+|+++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67777 56778999999999999999998865

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.50  E-value=0.75  Score=35.39  Aligned_cols=35  Identities=23%  Similarity=0.318  Sum_probs=29.1

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHc-CCeEEEEec
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKH-GAKVCIADV   50 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~-g~~V~~~~r   50 (280)
                      +++||+++|-|- |.+|..+|+.|++. |++|+.++-
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            489999999987 56999999999864 999877643

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=84.47  E-value=2.3  Score=31.02  Aligned_cols=70  Identities=14%  Similarity=0.193  Sum_probs=37.0

Q ss_pred             cCCcEEEEEcCCCh-------------HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHH
Q 023613           16 LVGRVALITGGATG-------------IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVC   82 (280)
Q Consensus        16 l~~k~vlItGa~~g-------------iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   82 (280)
                      +++|++++.|=|--             -+..+++.|-..+.+|+-.+..-.......+.                     
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~---------------------   59 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND---------------------   59 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence            46899999988733             34444444444555555444433222211110                     


Q ss_pred             HHHHHHHHHcCCccEEEECCCCCC
Q 023613           83 SAVDLTVEKFGTLDIMVNNAGISG  106 (280)
Q Consensus        83 ~~~~~~~~~~~~~d~li~~ag~~~  106 (280)
                      ..+..+.....+.|++|...|...
T Consensus        60 ~~~~~~~~~~~~~D~vvi~~G~ND   83 (208)
T d2o14a2          60 GQLEAILKYIKPGDYFMLQLGIND   83 (208)
T ss_dssp             SHHHHHHTTCCTTCEEEEECCTGG
T ss_pred             hhHHHHHHhcCCCCEEEEEcCCCc
Confidence            012233333456799999888753

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.11  E-value=0.49  Score=36.99  Aligned_cols=33  Identities=27%  Similarity=0.278  Sum_probs=29.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .|+|.||+ -.|..+|..|+++|.+|+++.++++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            37888887 8899999999999999999998764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.03  E-value=0.46  Score=35.86  Aligned_cols=34  Identities=29%  Similarity=0.444  Sum_probs=29.3

Q ss_pred             CcEEEEEcCCChHHHH-----HHHHHHHcCCeEEEEecC
Q 023613           18 GRVALITGGATGIGES-----TVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        18 ~k~vlItGa~~giG~~-----la~~l~~~g~~V~~~~r~   51 (280)
                      +|++.|+|+-||.|+.     +|..|++.|.+|++++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            7899999999998874     677888999999999865

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=83.14  E-value=1.2  Score=33.22  Aligned_cols=74  Identities=12%  Similarity=0.108  Sum_probs=51.6

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHh--CCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSL--GGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTL   95 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   95 (280)
                      +++||=.|++.|.-   +..++++|++|+.++-+++-++...+.+  ....++.++.+|..+..     +     ..+..
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~-----~~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F-----TDERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S-----CTTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----c-----ccccc
Confidence            68899999998854   4567888999999999987666544433  22357888888876531     0     11478


Q ss_pred             cEEEECCCC
Q 023613           96 DIMVNNAGI  104 (280)
Q Consensus        96 d~li~~ag~  104 (280)
                      |+++.+...
T Consensus        83 D~v~~~~~l   91 (231)
T d1vl5a_          83 HIVTCRIAA   91 (231)
T ss_dssp             EEEEEESCG
T ss_pred             ccccccccc
Confidence            988877654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.95  E-value=2.4  Score=28.62  Aligned_cols=76  Identities=12%  Similarity=0.140  Sum_probs=48.7

Q ss_pred             CcEEEEEcCCC-h---------HHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHH
Q 023613           18 GRVALITGGAT-G---------IGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDL   87 (280)
Q Consensus        18 ~k~vlItGa~~-g---------iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   87 (280)
                      .|.+||.|++. -         -+.+.++.|.++|++++++..+++...--.   .-..++.+   +--..+.+.++++.
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~---d~aD~lYf---eplt~e~v~~Ii~~   77 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY---DTSDRLYF---EPVTLEDVLEIVRI   77 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST---TSSSEEEC---CCCSHHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh---hhcCceEE---ccCCHHHHHHHHHH
Confidence            57899998863 2         345778899999999999988887543110   11123333   22346666555553


Q ss_pred             HHHHcCCccEEEECCCC
Q 023613           88 TVEKFGTLDIMVNNAGI  104 (280)
Q Consensus        88 ~~~~~~~~d~li~~ag~  104 (280)
                      =     ++|.++-..|.
T Consensus        78 E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          78 E-----KPKGVIVQYGG   89 (121)
T ss_dssp             H-----CCSEEECSSST
T ss_pred             h-----CCCEEEeehhh
Confidence            2     88888877764

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.92  E-value=2.5  Score=28.93  Aligned_cols=36  Identities=17%  Similarity=0.114  Sum_probs=27.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHH----HcCCeEEEEecCcc
Q 023613           17 VGRVALITGGATGIGESTVRLFH----KHGAKVCIADVQDN   53 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~----~~g~~V~~~~r~~~   53 (280)
                      ..|+++|.|| |.+|.++|..|+    +.|.+|.++.+.+.
T Consensus        36 ~~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          36 EVKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             HCSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            3778888866 688888888776    45889998887654

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=82.57  E-value=4.9  Score=31.57  Aligned_cols=30  Identities=10%  Similarity=-0.035  Sum_probs=24.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHcCCeEEEEe
Q 023613           20 VALITGGATGIGESTVRLFHKHGAKVCIAD   49 (280)
Q Consensus        20 ~vlItGa~~giG~~la~~l~~~g~~V~~~~   49 (280)
                      ..+|+..+|..|.++|..-+..|.+++++-
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~   99 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIM   99 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeecc
Confidence            358888889999999999999998855543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=82.31  E-value=0.74  Score=36.83  Aligned_cols=37  Identities=27%  Similarity=0.373  Sum_probs=29.7

Q ss_pred             CCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcch
Q 023613           17 VGRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNL   54 (280)
Q Consensus        17 ~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~   54 (280)
                      +.|.++|.||+ --|..+|..|++.|++|.+..++...
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~i   37 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDHI   37 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCCC
Confidence            36888999875 45777888999999999999887643

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.14  E-value=0.73  Score=36.20  Aligned_cols=31  Identities=16%  Similarity=0.262  Sum_probs=26.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHcCC-eEEEEecCc
Q 023613           21 ALITGGATGIGESTVRLFHKHGA-KVCIADVQD   52 (280)
Q Consensus        21 vlItGa~~giG~~la~~l~~~g~-~V~~~~r~~   52 (280)
                      |+|.||+ -+|.++|.+|+++|. +|++++|+.
T Consensus         4 ViIIGaG-i~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGAG-IVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECcC-HHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6777765 899999999999996 599998864

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=81.48  E-value=2.1  Score=29.06  Aligned_cols=37  Identities=14%  Similarity=0.181  Sum_probs=28.6

Q ss_pred             ccCCcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCc
Q 023613           15 RLVGRVALITGGATGIGESTVRLFHKHGAKVCIADVQD   52 (280)
Q Consensus        15 ~l~~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~   52 (280)
                      .++||.++|.|++ .-...-|..|++...+|.++.|.+
T Consensus        27 ~~~gk~V~VvGgG-~sA~~~A~~L~~~a~~V~li~r~~   63 (126)
T d1fl2a2          27 LFKGKRVAVIGGG-NSGVEAAIDLAGIVEHVTLLEFAP   63 (126)
T ss_dssp             GGBTCEEEEECCS-HHHHHHHHHHHTTBSEEEEECSSS
T ss_pred             hcCCceEEEEeCC-HHHHHHHHhhhccCCceEEEeccc
Confidence            4789999999974 444555668888877899998865

>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain
species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Probab=81.45  E-value=4.9  Score=28.72  Aligned_cols=87  Identities=14%  Similarity=0.100  Sum_probs=55.6

Q ss_pred             CcEEEEE-cC-CChHHHHHHHHHH-HcCCeEEEEecCcchHHHHHHHhCCCCCeEEEe-cCCCCHHHHHHHHHHHHHHcC
Q 023613           18 GRVALIT-GG-ATGIGESTVRLFH-KHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCH-CDVTKEEDVCSAVDLTVEKFG   93 (280)
Q Consensus        18 ~k~vlIt-Ga-~~giG~~la~~l~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~~~~~~   93 (280)
                      .|+++-| |+ ...+|..++..+. ..|+.|+..+......+-.....+...++..+. .+-...+.+.++++.+++. +
T Consensus        38 pkVlla~~g~D~Hd~G~~~va~~l~~~G~eVi~lg~~~~~e~iv~aa~~~~advI~iSs~~~~~~~~~~~l~~~L~~~-g  116 (168)
T d7reqa2          38 PRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKL-G  116 (168)
T ss_dssp             CEEEEECBTTCCCCHHHHHHHHHHHHTTCEEEECCTTBCHHHHHHHHHHHTCSEEEEEECSSCHHHHHHHHHHHHHHT-T
T ss_pred             CeEEEEeCCccHHHHHHHHHHHHHHhCCcceecCCCcCcHHHHHHHHHccCCCEEEEecCcccchHHHHHHHHHHHhc-C
Confidence            3555444 44 3688988887666 469999988775544333322223335666554 5666678899999999876 4


Q ss_pred             CccEEEECCCCC
Q 023613           94 TLDIMVNNAGIS  105 (280)
Q Consensus        94 ~~d~li~~ag~~  105 (280)
                      .-|+.|...|..
T Consensus       117 ~~~v~VivGG~i  128 (168)
T d7reqa2         117 RPDILITVGGVI  128 (168)
T ss_dssp             CTTSEEEEEESC
T ss_pred             CCCeEEEEeCCC
Confidence            456667666643

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=81.37  E-value=5.5  Score=26.32  Aligned_cols=81  Identities=15%  Similarity=0.124  Sum_probs=56.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcchHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHHHHHHcCCccE
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDNLGQQVCQSLGGEPDTFFCHCDVTKEEDVCSAVDLTVEKFGTLDI   97 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   97 (280)
                      +|++||.--...+-..+.+.|.+.|+.|..+....+.++.+.+ ..  .++.++...+-+.+. .++++++++....+-+
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~~-~~--~dlillD~~mP~~~G-~el~~~lr~~~~~~pv   76 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTK-ER--PDLVLLDMKIPGMDG-IEILKRMKVIDENIRV   76 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHH-HC--CSEEEEESCCTTCCH-HHHHHHHHHHCTTCEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHh-CC--CCEEEEeccCCCCCH-HHHHHHHHHhCCCCcE
Confidence            5789999999999999999999999999877665555544433 22  466666655555544 3557777776656666


Q ss_pred             EEECC
Q 023613           98 MVNNA  102 (280)
Q Consensus        98 li~~a  102 (280)
                      ++..+
T Consensus        77 i~lt~   81 (119)
T d1peya_          77 IIMTA   81 (119)
T ss_dssp             EEEES
T ss_pred             EEEec
Confidence            66554

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.20  E-value=0.58  Score=35.19  Aligned_cols=33  Identities=24%  Similarity=0.390  Sum_probs=28.0

Q ss_pred             cEEEEEcCCChHHH-----HHHHHHHHcCCeEEEEecC
Q 023613           19 RVALITGGATGIGE-----STVRLFHKHGAKVCIADVQ   51 (280)
Q Consensus        19 k~vlItGa~~giG~-----~la~~l~~~g~~V~~~~r~   51 (280)
                      |++.|+++-||.|+     .+|..|++.|.+|.+++-+
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D   39 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD   39 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            78999999888887     4677888999999998765

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=81.16  E-value=4.6  Score=26.50  Aligned_cols=35  Identities=29%  Similarity=0.291  Sum_probs=27.2

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHc---CCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKH---GAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~---g~~V~~~~r~~~   53 (280)
                      .|.++|.|| |.+|.++|..|++.   |..|.++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            577888876 58999999877654   888999888654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=80.87  E-value=0.93  Score=30.23  Aligned_cols=35  Identities=20%  Similarity=0.334  Sum_probs=29.3

Q ss_pred             CcEEEEEcCCChHHHHHHHHHHHcCCeEEEEecCcc
Q 023613           18 GRVALITGGATGIGESTVRLFHKHGAKVCIADVQDN   53 (280)
Q Consensus        18 ~k~vlItGa~~giG~~la~~l~~~g~~V~~~~r~~~   53 (280)
                      .|.++|.| +|-+|.++|..|++.|++|.++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            46666665 469999999999999999999988764

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.44  E-value=7.1  Score=27.44  Aligned_cols=73  Identities=8%  Similarity=-0.020  Sum_probs=39.5

Q ss_pred             EEEEEcCCChHHHHHHH-HHHH-c----CCeEEEEecCcchHHHHHHHhCC--CCCeEEEecCCCCHHHHHHHHHHHHHH
Q 023613           20 VALITGGATGIGESTVR-LFHK-H----GAKVCIADVQDNLGQQVCQSLGG--EPDTFFCHCDVTKEEDVCSAVDLTVEK   91 (280)
Q Consensus        20 ~vlItGa~~giG~~la~-~l~~-~----g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   91 (280)
                      .+.|.||++ +|..++- .+++ .    ...+++.+.++++++...+..+.  .....+. .- ++.++      .    
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~-~t-~~~~~------~----   68 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL-IS-DTFEG------A----   68 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE-EC-SSHHH------H----
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEE-Ee-cCccc------c----
Confidence            367788755 4544442 2322 1    35799999998877654433221  1112221 11 22221      1    


Q ss_pred             cCCccEEEECCCCC
Q 023613           92 FGTLDIMVNNAGIS  105 (280)
Q Consensus        92 ~~~~d~li~~ag~~  105 (280)
                      ..+-|++|..+|..
T Consensus        69 l~~aDvVVita~~~   82 (162)
T d1up7a1          69 VVDAKYVIFQFRPG   82 (162)
T ss_dssp             HTTCSEEEECCCTT
T ss_pred             cCCCCEEEEecccC
Confidence            13789999999875

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=80.43  E-value=0.33  Score=35.41  Aligned_cols=74  Identities=18%  Similarity=0.159  Sum_probs=41.7

Q ss_pred             EEEEEcCCC-hHHHHHHHHHHHc----CCeEEEEecCcchHHHHHHHhC-----CCCCeEEEecCCCCHHHHHHHHHHHH
Q 023613           20 VALITGGAT-GIGESTVRLFHKH----GAKVCIADVQDNLGQQVCQSLG-----GEPDTFFCHCDVTKEEDVCSAVDLTV   89 (280)
Q Consensus        20 ~vlItGa~~-giG~~la~~l~~~----g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~   89 (280)
                      .+.|.||++ |...++...++..    +..+++++.++++++.....+.     ......+...  +|.++         
T Consensus         4 KI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~~e---------   72 (171)
T d1obba1           4 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLDD---------   72 (171)
T ss_dssp             EEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHHH---------
T ss_pred             EEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CChhh---------
Confidence            466777632 3444555556643    3589999999887665332221     1123333222  23322         


Q ss_pred             HHcCCccEEEECCCCC
Q 023613           90 EKFGTLDIMVNNAGIS  105 (280)
Q Consensus        90 ~~~~~~d~li~~ag~~  105 (280)
                       ....-|++|+.+++.
T Consensus        73 -aL~dad~Vv~~~~~g   87 (171)
T d1obba1          73 -VIIDADFVINTAMVG   87 (171)
T ss_dssp             -HHTTCSEEEECCCTT
T ss_pred             -cccCCCeEeeecccc
Confidence             124899999998875