BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023616
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 319
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 128/270 (47%), Gaps = 50/270 (18%)
Query: 28 ASSPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQD 87
A +PI P + M E +A +L + +LE ++S A +T + + D
Sbjct: 53 APAPIITPTLKEDMAYE---EAIAALKKLLSEKG--ELENEAASKVAQITSE-----LAD 102
Query: 88 GAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKN---------------- 131
G + +K+ F+ FKK KY + + L+K Q+PK
Sbjct: 103 GGTPSASYP-VQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVL 161
Query: 132 --GPSE---------------------TNAALEFAVNTLEVQNILVIGHSDCGGIQALMR 168
P E AA+E+AV L+V+NI+VIGHS CGGI+ LM
Sbjct: 162 DFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 221
Query: 169 MQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWI 228
D + E+WV AK + A + +F +QC HCEKE+++ S+ NLLTYP++
Sbjct: 222 FPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFV 281
Query: 229 EERVRKELLFIHGGYYDLLNCTFEKWTLDY 258
+ + K+ L + GGYYD +N +FE W L+Y
Sbjct: 282 RDGLVKKTLALQGGYYDFVNGSFELWGLEY 311
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1
PE=1 SV=2
Length = 347
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 127/276 (46%), Gaps = 48/276 (17%)
Query: 24 ESTFAS-SPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTS 82
E FA+ +PI P S+ M E +A + +L +E T AA ++ +
Sbjct: 60 EPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLL-------IEKEELKTVAAAKVEQIT 112
Query: 83 YKVQDGAKS-CGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKN---------- 131
+Q G S D E +KQ F+ FKK KY + LAK QSPK
Sbjct: 113 AALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRV 172
Query: 132 GPSET-----------------------------NAALEFAVNTLEVQNILVIGHSDCGG 162
PS AA+E+AV L+V+NI+VIGHS CGG
Sbjct: 173 CPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGG 232
Query: 163 IQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNL 222
I+ LM D ++ E+WV AK + + +F+ QC CE+E+++ S+ NL
Sbjct: 233 IKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANL 292
Query: 223 LTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLDY 258
LTYP++ E + K L + GGYYD + FE W L++
Sbjct: 293 LTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEF 328
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2
PE=1 SV=2
Length = 259
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 116/241 (48%), Gaps = 51/241 (21%)
Query: 57 LKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEE 116
LK + +K++ ++ AA + D S+ D E +K+ F++FKK KY
Sbjct: 23 LKDVAAAKVKKITAELQAASSSDSKSF------------DPVERIKEGFVTFKKEKYETN 70
Query: 117 LEHFQNLAKAQSPKN----------GPSET-----------------------------N 137
+ LAK QSPK PS
Sbjct: 71 PALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVG 130
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAY 197
AA+E+AV L+V+NI+VIGHS CGGI+ LM D ++ E+WV AK + A
Sbjct: 131 AAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAE 190
Query: 198 TAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLD 257
+ +F+ QC CE+E+++ S+ NLLTYP++ E V K L + GGYYD +N +FE W L
Sbjct: 191 SESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQ 250
Query: 258 Y 258
+
Sbjct: 251 F 251
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 321
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 124/277 (44%), Gaps = 52/277 (18%)
Query: 24 ESTFAS-SPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTS 82
E FA+ +PI P + M E A +L E AA D+ +
Sbjct: 47 EPVFAAPTPIINPILREEMAKESYEQAIAALEKLLS-------EKGELGPIAAARVDQIT 99
Query: 83 YKVQ--DGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKN--------- 131
++Q DG+K D E MK F+ FK KY + + L+K QSPK
Sbjct: 100 AELQSSDGSKP---FDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSR 156
Query: 132 ---------GPSE---------------------TNAALEFAVNTLEVQNILVIGHSDCG 161
P E AA+E+AV L+V+NI+VIGHS CG
Sbjct: 157 VCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACG 216
Query: 162 GIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILN 221
GI+ LM + D + E+WV AK + + F QC CEKE+++ S+ N
Sbjct: 217 GIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGN 276
Query: 222 LLTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLDY 258
LLTYP++ E + K+ L + GG+YD +N FE W L++
Sbjct: 277 LLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEF 313
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1
Length = 330
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 93/203 (45%), Gaps = 39/203 (19%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKN------------------GPSE- 135
D E +K F+ FK K+ + LAK QSPK P E
Sbjct: 120 FDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 179
Query: 136 --------------------TNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDS 175
AA+E+AV L+VQ I VIGHS CGGI+ LM D+
Sbjct: 180 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPH 239
Query: 176 RQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKE 235
E+WV AK + A D QC CEKE+++ S+ NLLTYP++ + +R
Sbjct: 240 STDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNN 299
Query: 236 LLFIHGGYYDLLNCTFEKWTLDY 258
L + GG+YD +N TFE W LD+
Sbjct: 300 TLALKGGHYDFVNGTFELWALDF 322
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1
Length = 328
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 95/199 (47%), Gaps = 39/199 (19%)
Query: 99 EEMKQRFLSFKKNKYFEELEHFQNLAKAQSP----------KNGPSE------------- 135
E +K FL FKK KY + + LAK QSP + PS
Sbjct: 122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 181
Query: 136 ----------------TNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSL 179
T AA+E+AV L+V NI+VIGHS CGGI+ L+ D
Sbjct: 182 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDF 241
Query: 180 TENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFI 239
E WV AK + KA F + C HCEKE+++ S+ NLLTYP++ E + + L +
Sbjct: 242 IEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLAL 301
Query: 240 HGGYYDLLNCTFEKWTLDY 258
GGYYD + +FE W L++
Sbjct: 302 KGGYYDFVKGSFELWGLEF 320
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2
Length = 330
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 94/203 (46%), Gaps = 39/203 (19%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKN------------------GPSE- 135
D E +K F+ FK K+ + LAK QSPK P E
Sbjct: 120 FDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 179
Query: 136 --------------------TNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDS 175
AA+E+AV L+VQ I VIGHS CGGI+ LM D+
Sbjct: 180 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPH 239
Query: 176 RQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKE 235
E+WV AK + A D QC CEKE+++ S+ NLLTYP++ + +R +
Sbjct: 240 STDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNK 299
Query: 236 LLFIHGGYYDLLNCTFEKWTLDY 258
L + GG+YD +N TFE W LD+
Sbjct: 300 TLALKGGHYDFVNGTFELWALDF 322
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1
Length = 330
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 93/203 (45%), Gaps = 39/203 (19%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKN------------------GPSE- 135
D E +K F+ FK K+ + LAK QSPK P E
Sbjct: 120 FDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 179
Query: 136 --------------------TNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDS 175
AA+E+AV L+VQ I VIGHS CGGI+ LM D+
Sbjct: 180 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPH 239
Query: 176 RQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKE 235
E+WV AK + A D QC CEKE+++ S+ NLLTYP++ + +R
Sbjct: 240 STDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNN 299
Query: 236 LLFIHGGYYDLLNCTFEKWTLDY 258
L + GG+YD +N TFE W LD+
Sbjct: 300 TLALKGGHYDFVNGTFELWALDF 322
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1
Length = 329
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 93/203 (45%), Gaps = 39/203 (19%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKN------------------GPSE- 135
D E +K F+ FK K+ + LAK QSPK P E
Sbjct: 119 FDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 178
Query: 136 --------------------TNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDS 175
AA+E+AV L+VQ I VIGHS CGGI+ LM D+
Sbjct: 179 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPH 238
Query: 176 RQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKE 235
E+WV AK + A D QC CEKE+++ S+ NLLTYP++ + +R
Sbjct: 239 STDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNN 298
Query: 236 LLFIHGGYYDLLNCTFEKWTLDY 258
L + GG+YD +N TFE W LD+
Sbjct: 299 TLALKGGHYDFVNGTFELWALDF 321
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1
Length = 190
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 76/125 (60%)
Query: 134 SETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFR 193
S AA+E+AV L+V+NI+VIGHS CGGI+ LM + DD E WV AK +
Sbjct: 58 SGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSK 117
Query: 194 TKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEK 253
KA +L F C CEKE+++ S+ NLLTYP++ + + + L + G +YD +N F+
Sbjct: 118 VKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDL 177
Query: 254 WTLDY 258
W LD+
Sbjct: 178 WNLDF 182
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 324
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 126/285 (44%), Gaps = 45/285 (15%)
Query: 15 SMAALKTSVESTFASSPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETS-----S 69
S ++K + T + PI G +T A + V R S + S
Sbjct: 38 STCSMKINSTCTLTALPIAALPGPRTTSHYSTAAANWCYATVAPRARSSTIAASLGTPAP 97
Query: 70 SSTAAALTRDRTSYKVQDGAKSCGGLDY-FEEMKQRFLSFKKNKYFEELEHFQNLAKAQS 128
SS+A+ + + VQ + +D E +K F FK Y ++ + F+ L Q+
Sbjct: 98 SSSASFRPKLIRTTPVQAAPVAPALMDAAVERLKTGFEKFKTEVYDKKPDFFEPLKAGQA 157
Query: 129 PKN----------GPSET-----------------------------NAALEFAVNTLEV 149
PK PS T +A+E+AV L+V
Sbjct: 158 PKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKV 217
Query: 150 QNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRH 209
+ I+VIGHS CGGI+AL+ ++D D E+WV AK + + A + FD QC
Sbjct: 218 EVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTV 277
Query: 210 CEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEKW 254
EKE+++ S+ NLLTYP+++E V L + GG+YD ++ FE W
Sbjct: 278 LEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322
>sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=icfA PE=1 SV=1
Length = 274
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 140 LEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTA 199
+E+A+ LE+ I+V GHS CG ++ L+++ + + + L +W+ + + + +
Sbjct: 81 MEYALVALEINQIIVCGHSHCGAMKGLLKL-NSLQEKLPLVYDWLKHTEATRRLVLDNYS 139
Query: 200 HLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYY 244
HL + E+I + NL TYP I R+ + L +HG Y
Sbjct: 140 HLEGEDLIEVAVAENILTQLKNLQTYPAIHSRLHRGDLSLHGWIY 184
>sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=cynT PE=3 SV=1
Length = 220
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 122 NLAKAQSPKNGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTE 181
N+ P+ P +A++E+AV L V +I+V GHSDCG + A+ +D ++
Sbjct: 65 NIVPGYGPQ--PGGVSASVEYAVAVLGVGDIVVCGHSDCGAMGAIASCA-CLDQLPAVA- 120
Query: 182 NWVVNAKVAKFRTKAYTAHLS----FDQQCRHCEKESISRSILNLLTYPWIEERVRKELL 237
W+ +A+ A+ A+ H S D RH ++ + NL T+P + + + L
Sbjct: 121 GWLHHAEAARAMNSAHE-HASEAARLDALVRH----NVIAQLANLRTHPCVARALEQGRL 175
Query: 238 FIHGGYYDL 246
+HG YD+
Sbjct: 176 NLHGWVYDI 184
>sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori (strain J99) GN=cynT PE=3
SV=1
Length = 221
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 116 ELEHFQNLAKAQSPKNGPSE---TNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 172
EL +N+ PK E T A++E+A+ + VQN+++ GHSDCG ++ + D+
Sbjct: 55 ELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDE 114
Query: 173 -VDSRQSLTENWVVNAKVAKFRTKAYTAHLS-FDQQCRHCEKESISRSILNLLTYPWIEE 230
++ NW+ + K K + + F ++ E+ + + NLL+Y +I+E
Sbjct: 115 TTKAKTPYIANWIQFLEPIKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQE 174
Query: 231 RVRKELLFIHGGYY 244
RV L I G +Y
Sbjct: 175 RVINNELKIFGWHY 188
>sp|O24855|CYNT_HELPY Carbonic anhydrase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=cynT PE=3 SV=1
Length = 221
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 116 ELEHFQNLAKAQSPKNGPSE---TNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 172
EL N+ PK E T A++E+A+ + VQN+++ GHSDCG ++ + D+
Sbjct: 55 ELYVICNMGNVNPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDE 114
Query: 173 -VDSRQSLTENWVVNAKVAKFRTKAYTAHLS-FDQQCRHCEKESISRSILNLLTYPWIEE 230
++ NW+ + K K + + F ++ E+ + + NLL+Y +I+E
Sbjct: 115 TTKAKTPYIANWIQFLEPVKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQE 174
Query: 231 RVRKELLFIHGGYY 244
+ K L I G +Y
Sbjct: 175 KASKNELKIFGWHY 188
>sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1
SV=1
Length = 219
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 122 NLAKAQSPKNGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTE 181
N+ + P+ P +A++E+AV L V +I++ GHS+CG + A+ Q +D +++
Sbjct: 65 NIVPSYGPE--PGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQ-CMDHMPAVS- 120
Query: 182 NWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHG 241
+W+ A A+ +A H + +E++ + NL T+P + + + + +HG
Sbjct: 121 HWLRYADSARVVNEARP-HSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHG 179
Query: 242 GYYDL 246
YD+
Sbjct: 180 WVYDI 184
>sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1
Length = 219
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 122 NLAKAQSPKNGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTE 181
N+ + P+ P +A++E+AV L V +I++ GHS+CG + A+ Q +D +++
Sbjct: 65 NIVPSYGPE--PGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQ-CMDHMPAVS- 120
Query: 182 NWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHG 241
+W+ A A+ +A H + +E++ + NL T+P + + + + +HG
Sbjct: 121 HWLRYADSARVVNEARP-HSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHG 179
Query: 242 GYYDL 246
YD+
Sbjct: 180 WVYDI 184
>sp|P45148|CAN_HAEIN Carbonic anhydrase 2 OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=can PE=1 SV=1
Length = 229
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAY 197
+ +++AV+ L++++I++ GH++CGGI A M D L NW+++ + F+
Sbjct: 79 SVVQYAVDVLKIEHIIICGHTNCGGIHAAM-----ADKDLGLINNWLLHIRDIWFKHGHL 133
Query: 198 TAHLSFDQQCRHCEKESISRSILNL-----LTYPWIEERVRKELLFIHGGYYDL 246
LS +++ K +++ + NL + W ER +K L +HG YD+
Sbjct: 134 LGKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAW--ERGQK--LSLHGWVYDV 183
>sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942)
GN=icfA PE=3 SV=1
Length = 272
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 122 NLAKAQSPKNGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTE 181
NL NG A++E+A+ L +++++V GHS CG ++ L+++ + + L
Sbjct: 65 NLIPPFGAANG--GEGASIEYAIAALNIEHVVVCGHSHCGAMKGLLKL-NQLQEDMPLVY 121
Query: 182 NWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHG 241
+W+ +A+ + + D E++ I NL TYP + R+ + L I G
Sbjct: 122 DWLQHAQATRRLVLDNYSGYETDDLVEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFG 181
Query: 242 GYYDL 246
Y++
Sbjct: 182 WIYEV 186
>sp|P61518|CAN_SHIFL Carbonic anhydrase 2 OS=Shigella flexneri GN=can PE=3 SV=1
Length = 220
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFR 193
+ +++AV+ LEV++I++ GH CGG+QA + + L NW+++ + F+
Sbjct: 79 SVVQYAVDVLEVEHIIICGHYGCGGVQAAVE-----NPELGLINNWLLHIRDIWFK 129
>sp|P61517|CAN_ECOLI Carbonic anhydrase 2 OS=Escherichia coli (strain K12) GN=can PE=1
SV=1
Length = 220
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFR 193
+ +++AV+ LEV++I++ GH CGG+QA + + L NW+++ + F+
Sbjct: 79 SVVQYAVDVLEVEHIIICGHYGCGGVQAAVE-----NPELGLINNWLLHIRDIWFK 129
>sp|P53615|CAN_YEAST Carbonic anhydrase OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=NCE103 PE=1 SV=1
Length = 221
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQ 170
A LEFA+ L+V +++ GH+DCGGI+ + Q
Sbjct: 93 ATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQ 125
>sp|A8XKV0|BCA1_CAEBR Beta carbonic anhydrase 1 OS=Caenorhabditis briggsae GN=bca-1 PE=3
SV=2
Length = 270
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 28/136 (20%)
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRM------------------QDDVDSRQSL 179
AALE AV ++++++V GHSDC + L ++ ++ +S + L
Sbjct: 86 AALELAVKRGKIRHVVVCGHSDCKAMNTLYQLHQCPTKFDVSSPMDQWLRRNGFESMKKL 145
Query: 180 TENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKES---------ISRSILNLLTYPWIEE 230
E + K KF ++ + SF+ EK S + + I+N+ T+ ++++
Sbjct: 146 NERLHIGPKTMKFESEVAPSQ-SFEAIIDPMEKWSAEDKLSQINVLQQIMNISTHEFLKD 204
Query: 231 RVRKELLFIHGGYYDL 246
+ L +HG ++++
Sbjct: 205 YLEAGNLHLHGAWFNI 220
>sp|O94255|CAN_SCHPO Carbonic anhydrase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPBP8B7.05c PE=1 SV=2
Length = 328
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAY 197
A +E++V L+V++I+V GH CGG+ A + + +L ++W+ + + +
Sbjct: 200 AVMEYSVTVLKVKHIIVCGHYGCGGVAAALG-----PNLNNLLDHWLRHIRDVIEDNREE 254
Query: 198 TAHLSFDQQCRHCEKESISR--SILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEK 253
+ D Q R + ++ +++ ++ E + K L +HG YDL N +K
Sbjct: 255 LDAIE-DPQLRRLKLAELNTRAQAISVTRVGFVREAMEKRGLQVHGWIYDLSNGQIKK 311
>sp|Q5BCC5|CAN_EMENI Carbonic anhydrase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=AN1805 PE=1
SV=2
Length = 228
Score = 38.5 bits (88), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 60/144 (41%), Gaps = 29/144 (20%)
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAK-VAKFRTKA 196
+ + +AV L+V++I+V GH +CGG+QA + D + W+ N + V + K
Sbjct: 93 SVINYAVGHLKVKHIVVCGHYNCGGVQAALTPTD-----LGILNPWLRNIRDVYRLHEKE 147
Query: 197 YTA------------HLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYY 244
A L+ + CR K ++ + +P +HG +
Sbjct: 148 LDAIEDDGERFNRLVELNVIESCRSVIKTAVVQQSYEENGFP-----------IVHGWVF 196
Query: 245 DLLNCTFEKWTLDYKGRKVDEEEV 268
+L + + +D+ G D +++
Sbjct: 197 NLKDGLLKDLNIDFPGILADIQKI 220
>sp|Q22460|BCA1_CAEEL Beta carbonic anhydrase 1 OS=Caenorhabditis elegans GN=bca-1 PE=3
SV=1
Length = 270
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 34/139 (24%)
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQD-----DVDSRQSLTENWV-------- 184
AALE AV +++I+V GHSDC I L + DV S ++WV
Sbjct: 86 AALELAVKRGGIRHIVVCGHSDCKAINTLYGLHQCPKNFDVTSPM---DHWVRRNGFASV 142
Query: 185 --VNAKV------AKFRTKAYTAHLSFDQQCRHCE---------KESISRSILNLLTYPW 227
+N ++ KF ++ + SFD + + ++ + ++N+ ++ +
Sbjct: 143 KRLNERLHRGPSSMKFESEVAPSQ-SFDAIIDPMDTLAMEDKLSQINVLQQLINICSHEF 201
Query: 228 IEERVRKELLFIHGGYYDL 246
++E + L IHG ++D+
Sbjct: 202 LKEYLESGRLHIHGMWFDI 220
>sp|A0R566|CYNT_MYCS2 Carbonic anhydrase OS=Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155) GN=cynT PE=1 SV=1
Length = 206
Score = 34.3 bits (77), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 138 AALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 172
++E+AV L+V I+V+GH CG ++A + D+
Sbjct: 85 GSIEYAVTVLKVPLIVVLGHDSCGAVKATLSALDE 119
>sp|O53573|MTCA2_MYCTU Carbonic anhydrase 2 OS=Mycobacterium tuberculosis GN=mtcA2 PE=1
SV=1
Length = 207
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 32/107 (29%)
Query: 98 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKN---GPSETNAA--------------- 139
+E +RF++ + + ++H LA Q P G +++ A
Sbjct: 13 LKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVV 72
Query: 140 --------------LEFAVNTLEVQNILVIGHSDCGGIQALMRMQDD 172
+E+AV L V I+V+GH CG + A + +D
Sbjct: 73 RTAGHVIDSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAIND 119
>sp|Q0I534|HSLO_HAES1 33 kDa chaperonin OS=Haemophilus somnus (strain 129Pt) GN=hslO PE=3
SV=1
Length = 286
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 138 AALEFAVN-TLEVQN-----ILVIGHSDCGGIQALMRMQDDVDSRQSLTE---NWVVNAK 188
A L+F N T+++Q +L++ SD I+AL R+QDDV +L+E N ++
Sbjct: 60 ATLKFKGNITIQIQGNGPLKLLLVNGSDSQQIRALARLQDDVYDDMTLSELVGNGILVIT 119
Query: 189 VAKFRTKAYTAHLSFDQ 205
+A + Y ++ D+
Sbjct: 120 IAPTNGERYQGVIALDK 136
>sp|Q5FLW2|MUTS2_LACAC MutS2 protein OS=Lactobacillus acidophilus (strain ATCC 700396 /
NCK56 / N2 / NCFM) GN=mutS2 PE=3 SV=1
Length = 785
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 131 NGPSETNAALEFAVNTLEVQ---NILVIGHSDCGGIQALMRMQDD-VDSRQSLT--ENWV 184
N P TNA++EF + TL I + GHS+ I + M++D V + Q L E+
Sbjct: 457 NRPRTTNASMEFDLKTLSPTYRLQIGIPGHSNAFAIARRLGMREDVVKNAQELMSDEDSD 516
Query: 185 VNAKVAKF--RTKAYTAHLSFDQQCRHCEKESISRS--ILNLL--TYPWIEERVRKELLF 238
+N +AK +TKA T R+ + S+ RS + L W +RV+K+L F
Sbjct: 517 INKMIAKLNAQTKAATT-------ARNRLETSLDRSQKLEQKLQQALDWYNQRVQKQLDF 569
>sp|Q7MX26|RPOC_PORGI DNA-directed RNA polymerase subunit beta' OS=Porphyromonas gingivalis
(strain ATCC BAA-308 / W83) GN=rpoC PE=3 SV=1
Length = 1433
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 39 KTMKLEKIRDAQQG-FTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDY 97
K +K+ K+RDA+ + +L+ + + L+T S +AA+ + + KV + A CG DY
Sbjct: 1317 KDLKIVKVRDAKSATASQILQGITRAALQTKSFMSAASF---QETTKVLNEAAICGKTDY 1373
Query: 98 FEEMKQRFL 106
E +K+ +
Sbjct: 1374 LEGLKENVI 1382
>sp|B2RL44|RPOC_PORG3 DNA-directed RNA polymerase subunit beta' OS=Porphyromonas gingivalis
(strain ATCC 33277 / DSM 20709 / JCM 12257) GN=rpoC PE=3
SV=1
Length = 1433
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 39 KTMKLEKIRDAQQG-FTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDY 97
K +K+ K+RDA+ + +L+ + + L+T S +AA+ + + KV + A CG DY
Sbjct: 1317 KDLKIVKVRDAKSATASQILQGITRAALQTKSFMSAASF---QETTKVLNEAAICGKTDY 1373
Query: 98 FEEMKQRFL 106
E +K+ +
Sbjct: 1374 LEGLKENVI 1382
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 31.6 bits (70), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 142 FAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHL 201
F +T+ + N L+ ++ CG + MR+ DD+DSR ++ N ++ KAY+ H
Sbjct: 400 FLADTV-LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML---------KAYSLHG 449
Query: 202 SFD 204
D
Sbjct: 450 QVD 452
>sp|A8YTJ4|MUTS2_LACH4 MutS2 protein OS=Lactobacillus helveticus (strain DPC 4571)
GN=mutS2 PE=3 SV=1
Length = 785
Score = 31.6 bits (70), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 131 NGPSETNAALEFAVNTLEVQ---NILVIGHSDCGGIQALMRMQDD-VDSRQSLT--ENWV 184
N P NA++EF + TL I + GHS+ I + M++D V + Q+L E+
Sbjct: 458 NRPRTINASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLMADEDSD 517
Query: 185 VNAKVAKF--RTKAYTAHLSFDQQCRHCEKESISRS--ILNLL--TYPWIEERVRKELLF 238
+N +AK +TKA T R+ + S+ RS + L W +RV+K+L F
Sbjct: 518 INKMIAKLNAQTKAATT-------ARNRLETSLDRSQKLEQKLQQALDWYNQRVQKQLDF 570
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,098,395
Number of Sequences: 539616
Number of extensions: 3699739
Number of successful extensions: 9742
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 9692
Number of HSP's gapped (non-prelim): 50
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)