Citrus Sinensis ID: 023617


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYK
cHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHcccccEEEEEccccEEEEEEEEccEEEEEEEcccEEEEEEEcccccEEEccccccccccccccEEEEEcccccccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccc
cHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccHHcEEEEcccccccccccHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHccccccEEEEcccEEEEEEEcccEEEEEEEccEEEEEcccccccEEEEccHccccHHcccccEEEEEcEEEEccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccc
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRnhhnnhnhhrrpmlqanqstCALFvgtwvrddtypmyqspecpiidsefncqmngrpdsdylkyrwqplncqlprfnglEFLVKMKGKTVMFVGDSLGLNQWESLICMIHaaaprtrthmtrgdplstfkfldygisvsfyrapylvdidvvhgkrvlkledisgngkswlNADVLSFNTghwwshegslqgWDYMESMGTYYQDMDRLVALEKGLRTWANWvdnnidrsktrVFFQSISPTHYK
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWAnwvdnnidrsktrvffqsispthyk
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLrnhhnnhnhhrrPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYK
**VLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNN*******MLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQ********
MAVLFLKLLGSFLTILCLVLVKPHTV*******************************LFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH**
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYK
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVI***********************TCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query280
255570858 405 conserved hypothetical protein [Ricinus 0.95 0.656 0.765 1e-122
225434550 392 PREDICTED: uncharacterized protein LOC10 0.964 0.688 0.749 1e-119
224105945 394 predicted protein [Populus trichocarpa] 0.975 0.692 0.738 1e-115
449455019 390 PREDICTED: uncharacterized protein LOC10 0.953 0.684 0.694 1e-114
356541751 388 PREDICTED: uncharacterized protein LOC10 0.903 0.652 0.716 1e-113
356566070 388 PREDICTED: uncharacterized protein LOC10 0.907 0.654 0.709 1e-113
356553086359 PREDICTED: uncharacterized protein LOC10 0.867 0.676 0.731 1e-110
224055329339 predicted protein [Populus trichocarpa] 0.828 0.684 0.763 1e-109
449526756345 PREDICTED: uncharacterized LOC101217703 0.828 0.672 0.737 1e-105
357490845 401 hypothetical protein MTR_5g071350 [Medic 0.846 0.591 0.723 1e-105
>gi|255570858|ref|XP_002526381.1| conserved hypothetical protein [Ricinus communis] gi|223534292|gb|EEF36005.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/269 (76%), Positives = 234/269 (86%), Gaps = 3/269 (1%)

Query: 13  LTILCLVLV-KPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPM 71
           L I CLVL+ +    +SA+IM +RNHH  HN +RRPMLQANQSTCALFVGTWV+DDTYP+
Sbjct: 27  LAIFCLVLLLETQIATSALIMSMRNHHKKHN-NRRPMLQANQSTCALFVGTWVKDDTYPL 85

Query: 72  YQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDS 131
           YQS  CP+ID +FNCQM GRPDSDYLKYRWQPLNC+LPRFNG+EFL+KMKGKTVMFVGDS
Sbjct: 86  YQSSHCPVIDPQFNCQMYGRPDSDYLKYRWQPLNCELPRFNGVEFLLKMKGKTVMFVGDS 145

Query: 132 LGLNQWESLICMIHAAAPRT-RTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGK 190
           LG NQWESLIC+I A  P T  T M+RGDP S FKFLDYG+S+++Y+APYLVDIDVV GK
Sbjct: 146 LGRNQWESLICLILATVPSTAATQMSRGDPFSIFKFLDYGVSIAYYKAPYLVDIDVVQGK 205

Query: 191 RVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKG 250
           R+LKLEDISGN  +W +ADVL FNTGHWW+H+GSLQGWDYMES GTYYQDMDRLVALEK 
Sbjct: 206 RILKLEDISGNANAWRHADVLLFNTGHWWNHQGSLQGWDYMESGGTYYQDMDRLVALEKA 265

Query: 251 LRTWANWVDNNIDRSKTRVFFQSISPTHY 279
           LRTWANW+D+NID S T +FFQSISPTHY
Sbjct: 266 LRTWANWIDSNIDTSATTLFFQSISPTHY 294




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434550|ref|XP_002277229.1| PREDICTED: uncharacterized protein LOC100263882 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224105945|ref|XP_002313988.1| predicted protein [Populus trichocarpa] gi|222850396|gb|EEE87943.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449455019|ref|XP_004145251.1| PREDICTED: uncharacterized protein LOC101208082 [Cucumis sativus] gi|449470704|ref|XP_004153056.1| PREDICTED: uncharacterized protein LOC101217703 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356541751|ref|XP_003539337.1| PREDICTED: uncharacterized protein LOC100813612 [Glycine max] Back     alignment and taxonomy information
>gi|356566070|ref|XP_003551258.1| PREDICTED: uncharacterized protein LOC100818177 [Glycine max] Back     alignment and taxonomy information
>gi|356553086|ref|XP_003544889.1| PREDICTED: uncharacterized protein LOC100795193 [Glycine max] Back     alignment and taxonomy information
>gi|224055329|ref|XP_002298483.1| predicted protein [Populus trichocarpa] gi|222845741|gb|EEE83288.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449526756|ref|XP_004170379.1| PREDICTED: uncharacterized LOC101217703 [Cucumis sativus] Back     alignment and taxonomy information
>gi|357490845|ref|XP_003615710.1| hypothetical protein MTR_5g071350 [Medicago truncatula] gi|355517045|gb|AES98668.1| hypothetical protein MTR_5g071350 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query280
TAIR|locus:2178813 402 PMR5 "AT5G58600" [Arabidopsis 0.975 0.679 0.617 2.6e-95
TAIR|locus:2045688 398 TBL45 "AT2G30010" [Arabidopsis 0.814 0.572 0.649 3.9e-83
TAIR|locus:2029959380 TBL38 "AT1G29050" [Arabidopsis 0.992 0.731 0.489 2.1e-70
TAIR|locus:2099402356 TBL41 "TRICHOME BIREFRINGENCE- 0.828 0.651 0.523 5.8e-66
TAIR|locus:2055425385 TBL37 "AT2G34070" [Arabidopsis 0.975 0.709 0.487 5.8e-66
TAIR|locus:2041574367 TBL39 "AT2G42570" [Arabidopsis 0.8 0.610 0.524 1.5e-65
TAIR|locus:2055878364 AT2G31110 "AT2G31110" [Arabido 0.796 0.612 0.508 5.2e-65
TAIR|locus:2037498359 TBL42 "TRICHOME BIREFRINGENCE- 0.796 0.621 0.469 2.8e-57
TAIR|locus:2080280 379 TBL36 "AT3G54260" [Arabidopsis 0.807 0.596 0.456 1.4e-55
TAIR|locus:2155874 457 TBL4 "AT5G49340" [Arabidopsis 0.810 0.496 0.406 4.1e-49
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
 Identities = 176/285 (61%), Positives = 219/285 (76%)

Query:     6 LKLLG-SFLT-ILCLVLVKPHTVSSAVIMGLXXXXXXXX-------XXXXPM--LQANQS 54
             L LLG S ++ I  LVL +P   SSA+I+ L                   P    Q N+S
Sbjct:     5 LPLLGISVVSAIFFLVLQQPEQSSSAIILSLKKRHGSSSGSSGNQYSSSRPSAGFQGNRS 64

Query:    55 TCALFVGTWVRDDTYPMYQSPECP-IIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNG 113
             TC+LF+GTWVRD++YP+Y+  +CP +++ EF+CQM GRPDSDYLKYRWQP NC LP FNG
Sbjct:    65 TCSLFLGTWVRDNSYPLYKPADCPGVVEPEFDCQMYGRPDSDYLKYRWQPQNCNLPTFNG 124

Query:   114 LEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISV 173
              +FL+KMKGKT+MF GDSLG NQWESLIC+I ++AP TRT MTRG PLSTF+FLDYGI++
Sbjct:   125 AQFLLKMKGKTIMFAGDSLGKNQWESLICLIVSSAPSTRTEMTRGLPLSTFRFLDYGITM 184

Query:   174 SFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMES 233
             SFY+AP+LVDID V GKRVLKL++ISGN  +W +AD+L FNTGHWWSH GS+QGWD ++S
Sbjct:   185 SFYKAPFLVDIDAVQGKRVLKLDEISGNANAWHDADLLIFNTGHWWSHTGSMQGWDLIQS 244

Query:   234 MGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTH 278
               +YYQDMDR VA+EK LRTWA WV+ ++DRS+T+V F SISPTH
Sbjct:   245 GNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTH 289




GO:0003674 "molecular_function" evidence=ND
GO:0005783 "endoplasmic reticulum" evidence=ISS
GO:0009620 "response to fungus" evidence=IMP
GO:0006333 "chromatin assembly or disassembly" evidence=RCA
TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query280
PLN02629 387 PLN02629, PLN02629, powdery mildew resistance 5 0.0
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 7e-69
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 1e-25
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  512 bits (1321), Expect = 0.0
 Identities = 213/276 (77%), Positives = 241/276 (87%), Gaps = 2/276 (0%)

Query: 5   FLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWV 64
            L L   F  +  LVL++P   SSA+I+ L+NHHN+H  +RRP LQANQSTCALFVGTWV
Sbjct: 3   CLLLGSCFSFLFFLVLLQPEIASSALILSLKNHHNHH-SNRRPSLQANQSTCALFVGTWV 61

Query: 65  RDDTYPMYQSPECP-IIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGK 123
           RDD+YP+YQS +CP +ID EFNCQM GRPDSDYLKYRWQPLNC+LPRFNGLEFL+KMKGK
Sbjct: 62  RDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGK 121

Query: 124 TVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVD 183
           TVMFVGDSLG NQWESLIC+I ++ P TRT M+RGDPLSTFKFLDYG+S+SFY+APYLVD
Sbjct: 122 TVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVD 181

Query: 184 IDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDR 243
           ID V GKRVLKLE+ISGN  +W +ADVL FNTGHWWSH+GSLQGWDY+ES GTYYQDMDR
Sbjct: 182 IDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDR 241

Query: 244 LVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHY 279
           LVALEK LRTWA WVD N+DRS+TRVFFQSISPTHY
Sbjct: 242 LVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHY 277


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 280
PLN02629 387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 99.97
PF1441655 PMR5N: PMR5 N terminal Domain 99.95
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 97.92
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 92.05
COG2845 354 Uncharacterized protein conserved in bacteria [Fun 84.52
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=4.1e-89  Score=654.50  Aligned_cols=268  Identities=79%  Similarity=1.396  Sum_probs=250.9

Q ss_pred             HHHHHHHhhccccccccceeeeeccccCCCCCCCCccccCCCCCCCccccceeeCCCCCCCCCCCCC-CcCCCcccccCC
Q 023617           12 FLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECP-IIDSEFNCQMNG   90 (280)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cd~~~G~WV~D~~~PlY~~~sCp-~i~~~~nC~~nG   90 (280)
                      |..|++|++++.+.++||.|+.++.++..+.. ..+..+.+.++||+|+|+||+|+++|+|++++|| ||+++|||++||
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knG   88 (387)
T PLN02629         10 FSFLFFLVLLQPEIASSALILSLKNHHNHHSN-RRPSLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYG   88 (387)
T ss_pred             HHHHHHHhhhccchhhhhhhhhhhcccccccC-CCCCCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcC
Confidence            33345888899999999999999999776544 4556788899999999999999999999999999 999999999999


Q ss_pred             CCCCcccccccccCccCCCCCChHHHHHHhcCCcEEEEeccchhHHHHHHHHhhcccCCCCeeeeeeCCCceEEEEeecC
Q 023617           91 RPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYG  170 (280)
Q Consensus        91 RpD~~y~~wrWqP~~C~l~~fd~~~~l~~lrgk~i~FvGDSl~R~~~~sl~clL~~~~~~~~~~~~~~~~~~~~~f~~~n  170 (280)
                      |||++|++|||||++|+||||||.+||+.||||+||||||||+|||||||+|||++++|+.++.+.++++.++|+|++||
T Consensus        89 RPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN  168 (387)
T PLN02629         89 RPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYG  168 (387)
T ss_pred             CCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCC
Confidence            99999999999999999999999999999999999999999999999999999999998776666677788999999999


Q ss_pred             eEEEEEEccceeecccccceeeEEeccCCcccCCCCCccEEEEcCccccccCCcccceeeeecCceeeccCCHHHHHHHH
Q 023617          171 ISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKG  250 (280)
Q Consensus       171 ~Tv~f~WsPfLv~~~~~~~~~~L~lD~~d~~a~~w~~~DvLV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~Ay~~a  250 (280)
                      +||+||||||||+.+..++.++|+||+++++++.|+++|||||||||||.+++..++|+|++.|+.++++|++.+||++|
T Consensus       169 ~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~a  248 (387)
T PLN02629        169 VSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKA  248 (387)
T ss_pred             EEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHH
Confidence            99999999999998877777899999999888899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCceEEEEecCCCCCC
Q 023617          251 LRTWANWVDNNIDRSKTRVFFQSISPTHYK  280 (280)
Q Consensus       251 L~t~~~wv~~~~~~~k~~vffRT~SP~Hfe  280 (280)
                      |+||++||++++++.|++|||||+||+|||
T Consensus       249 l~T~~~wv~~~~~~~kt~vffrT~SP~Hfe  278 (387)
T PLN02629        249 LRTWAYWVDTNVDRSRTRVFFQSISPTHYN  278 (387)
T ss_pred             HHHHHHHHHhcCCCCCcEEEEEecCccccc
Confidence            999999999999999999999999999997



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query280
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 54.1 bits (129), Expect = 2e-08
 Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 90/272 (33%)

Query: 36  NHHNNH--------NHHRRPMLQANQSTCALFVGTW----VRDDTYPMYQSPECPIIDSE 83
           +HH++H         +  + +L   +     FV  +    V+D    +    E   I   
Sbjct: 1   HHHHHHMDFETGEHQYQYKDILSVFEDA---FVDNFDCKDVQDMPKSILSKEEIDHIIMS 57

Query: 84  FNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTV--MFVGDSLGLN-QWESL 140
                    D+     R             L + +  K + +   FV + L +N ++  L
Sbjct: 58  --------KDAVSGTLR-------------LFWTLLSKQEEMVQKFVEEVLRINYKF--L 94

Query: 141 ICMIH----AAAPRTRTHMTRGDPL--STFKFLDYGIS------------VSFYRAPYLV 182
           +  I       +  TR ++ + D L      F  Y +S            +    A  ++
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154

Query: 183 DIDVVHGKRVLKLEDISGNGKSWLNADVLS-------FNTGHWWSHEGSLQGWDYMESMG 235
               + G          G+GK+W+  DV          +   +W             ++ 
Sbjct: 155 ----IDGV--------LGSGKTWVALDVCLSYKVQCKMDFKIFWL------------NLK 190

Query: 236 TYYQDMDRLVALEKGLRTWANWVDNNIDRSKT 267
                   L  L+K L        +  D S  
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query280
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 91.44
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=91.44  E-value=0.27  Score=40.44  Aligned_cols=50  Identities=16%  Similarity=0.256  Sum_probs=35.5

Q ss_pred             CCccEEEEcCccccccCCcccceeeeecCceeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023617          206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPT  277 (280)
Q Consensus       206 ~~~DvLV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~Ay~~aL~t~~~wv~~~~~~~k~~vffRT~SP~  277 (280)
                      ..+|+||++.|..=..                    ...+.|+..|+++++.+.+.  .++.++++-|..|.
T Consensus        73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~  122 (200)
T 4h08_A           73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPV  122 (200)
T ss_dssp             SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCC
T ss_pred             CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCC
Confidence            4689999999964210                    12457889999998887653  35578888888774




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query280
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 85.29
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 81.89
d1pvva2163 Ornithine transcarbamoylase {Archaeon Pyrococcus f 80.02
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein BT2961
species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=85.29  E-value=0.15  Score=39.02  Aligned_cols=15  Identities=40%  Similarity=0.662  Sum_probs=13.0

Q ss_pred             cCCcEEEEeccchhH
Q 023617          121 KGKTVMFVGDSLGLN  135 (280)
Q Consensus       121 rgk~i~FvGDSl~R~  135 (280)
                      .||+|+|+|||++-.
T Consensus         7 ~~kkI~~~GDS~T~g   21 (248)
T d3bzwa1           7 QGKKVGYIGDSITDP   21 (248)
T ss_dssp             TTCEEEEEESTTTCT
T ss_pred             CCCEEEEEehHHccC
Confidence            599999999998753



>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure