BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023619
(280 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22929|BL1S1_ARATH Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Arabidopsis thaliana GN=BLOS1 PE=1 SV=1
Length = 152
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/115 (66%), Positives = 99/115 (86%)
Query: 166 QLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTL 225
QLI +++ SSL+LRE+TER++++++RHA R +DLL A+NGGV+E +V EKRIE EIR L
Sbjct: 36 QLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNL 95
Query: 226 AATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQD 280
A T+AKF KQTDQWLA +HA+N+AVKEIGDFENWMKTM+ DCK I AAIRNI++D
Sbjct: 96 AITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHED 150
>sp|Q5R7L8|BL1S1_PONAB Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Pongo abelii GN=BLOC1S1 PE=2 SV=2
Length = 153
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 75/116 (64%)
Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
L +L++ HQ + +E E+ +R+++ A +++ L D LN GV ++Y+ +++++ E++
Sbjct: 30 LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 89
Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
TL A+F KQT QW+ N A+KEIGD ENW ++++LD ++I A+ +Y+
Sbjct: 90 TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145
>sp|P78537|BL1S1_HUMAN Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Homo sapiens GN=BLOC1S1 PE=1 SV=2
Length = 153
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 75/116 (64%)
Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
L +L++ HQ + +E E+ +R+++ A +++ L D LN GV ++Y+ +++++ E++
Sbjct: 30 LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 89
Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
TL A+F KQT QW+ N A+KEIGD ENW ++++LD ++I A+ +Y+
Sbjct: 90 TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145
>sp|O55102|BL1S1_MOUSE Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Mus musculus GN=Bloc1s1 PE=1 SV=2
Length = 125
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 75/116 (64%)
Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
L +L++ HQ + +E E+ +R+++ A +++ L D LN GV ++Y+ +++++ E++
Sbjct: 2 LSRLLKEHQAKQNERKELQEKRRREAIAAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61
Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
TL A+F KQT QW+ N A+KEIGD ENW ++++LD ++I A+ +Y+
Sbjct: 62 TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
>sp|D3ZKU7|BL1S1_RAT Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Rattus norvegicus GN=Bloc1s1 PE=3 SV=1
Length = 125
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 75/116 (64%)
Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
L +L++ HQ + +E E+ +R+++ A +++ L D LN GV ++Y+ +++++ E++
Sbjct: 2 LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61
Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
TL A+F KQT QW+ N A+KEIGD ENW ++++LD ++I A+ +Y+
Sbjct: 62 TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
>sp|Q2NKW0|BL1S1_BOVIN Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Bos taurus GN=BLOC1S1 PE=2 SV=1
Length = 125
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 75/116 (64%)
Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
L +L++ HQ + +E E+ +R+++ A +++ L D LN GV ++Y+ +++++ E++
Sbjct: 2 LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61
Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
TL A+F KQT QW+ N A+KEIGD ENW ++++LD ++I A+ +Y+
Sbjct: 62 TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117
>sp|Q0VFD8|BL1S1_XENTR Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Xenopus tropicalis GN=bloc1s1 PE=2 SV=1
Length = 125
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 74/116 (63%)
Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
L +L++ HQ + +E E+ ++D++ A +++ L D LN GV ++YV +++++ E++
Sbjct: 2 LSRLLKEHQGKQTERKEAQEKRRKDAIAAATTLTEALVDHLNVGVAQAYVNQRKLDHEVK 61
Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
TL A+F KQT QW++ N A+KEIGD ENW ++++ D + I A+ +Y+
Sbjct: 62 TLQTQAAQFAKQTTQWISLVENFNQALKEIGDVENWARSIEKDMRIIATALEYVYK 117
>sp|Q54VX7|BL1S1_DICDI Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Dictyostelium discoideum GN=bloc1s1 PE=3 SV=1
Length = 135
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%)
Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
L +L+++HQ KL+E+ E K++++ V++ L D++N GV + +K++E E R
Sbjct: 2 LSKLVKDHQTHQNKLKEENEVLKKEAIASMGVVTNGLIDSVNTGVACIFANQKKLETEAR 61
Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIY 278
L A AKF KQT+QW+ N ++KEIGD ENW K ++ D +I+ I +Y
Sbjct: 62 LLQANTAKFSKQTNQWIHLIENFNNSLKEIGDVENWSKKIESDMHNISDIIEFLY 116
>sp|Q22616|BL1S1_CAEEL Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Caenorhabditis elegans GN=blos-1 PE=1 SV=1
Length = 129
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%)
Query: 167 LIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIRTLA 226
+++ H RE E+ K +++ A+ +S + D LN V ++Y +KR+++E +
Sbjct: 1 MLKEHSKKQHLRREVQEKLKNEAIVAAQTLSTAVVDHLNAKVAQAYGNQKRLDVEAKRFE 60
Query: 227 ATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
A KQT+QWL + +N A+KEIGD ENW KT++ D K I +R Y+
Sbjct: 61 NNSAALAKQTEQWLFITEGLNYALKEIGDVENWSKTIENDMKIITETLRRAYE 113
>sp|A1Z9S1|BL1S1_DROME Biogenesis of lysosome-related organelles complex 1 subunit 1
OS=Drosophila melanogaster GN=blos1 PE=1 SV=2
Length = 147
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 66/116 (56%)
Query: 164 LLQLIQNHQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIELEIR 223
L +++ H K +++ E +++++ + ++ L D LN GV ++Y+ +KR++ E +
Sbjct: 2 LTSMVKEHHKEQAKRKQEQEVRRKEAIEASNELTQSLVDTLNVGVAQAYLNQKRLDAEAK 61
Query: 224 TLAATIAKFMKQTDQWLATSHAINTAVKEIGDFENWMKTMDLDCKSINAAIRNIYQ 279
L F KQT QWL +TA+K++GD ENW ++++ D +IN + Y+
Sbjct: 62 QLHLGATNFAKQTHQWLQLIDQFSTALKDLGDVENWARSIEGDMHTINQTLELAYK 117
>sp|Q6A814|ARGB_PROAC Acetylglutamate kinase OS=Propionibacterium acnes (strain KPA171202
/ DSM 16379) GN=argB PE=3 SV=1
Length = 310
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 27/119 (22%)
Query: 129 PQVPPASTRVQA----TAETEKAQADTTAAAAAGGLEASLLQLIQN-------------- 170
P + P S V A T + ADT A A A L A L ++ N
Sbjct: 182 PVIAPVSPEVDAAGRPTGQVLNVNADTAATAIAQALRAEKLVMLTNVAGIYGTWPDPHTL 241
Query: 171 -HQHSSLKLREQTERAKRDSVRHAKRVSDLLTDALNGGVQESYVIEKRIE----LEIRT 224
+ S+ LR R A+ L DA++GGV + +++ RIE LEI T
Sbjct: 242 ISEVSASDLRAMIPRLGEGMRPKAQA----LLDAIDGGVSSAAIVDGRIEHALLLEIFT 296
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,776,042
Number of Sequences: 539616
Number of extensions: 3404516
Number of successful extensions: 14811
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 14783
Number of HSP's gapped (non-prelim): 75
length of query: 280
length of database: 191,569,459
effective HSP length: 116
effective length of query: 164
effective length of database: 128,974,003
effective search space: 21151736492
effective search space used: 21151736492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)