BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023620
(279 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23712|PSA1B_ARATH Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2
PE=1 SV=2
Length = 277
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/279 (79%), Positives = 242/279 (86%), Gaps = 2/279 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVL CVNKA SELSSHQ
Sbjct: 1 MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
+KIFKVDDHIGVAIAGLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61 RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QRSWKRPYGVGLLV GLDE GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+FE+F
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180
Query: 181 ESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFEIAGT 240
ES++EDLIKDA+MAIRETLQGETLKSS+CTV+V+G EPFH LDQE++QK+ID+FE
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFE--KV 238
Query: 241 EEGPAAAPDSAAEGGSAAEGGAASEQGAPAGEGVAPMDI 279
E A + AE +A EQG + VAPM+I
Sbjct: 239 PEEEEDAGEGEAEPEAAPGAAGTGEQGGSGDQDVAPMEI 277
>sp|P34066|PSA1A_ARATH Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1
PE=1 SV=3
Length = 278
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 207/236 (87%), Positives = 224/236 (94%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVL CVNKA SELSSHQ
Sbjct: 1 MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
+KIFKVDDHIGVAIAGLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61 RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QRSWKRPYGVGLLV GLDE GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE+F
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180
Query: 181 ESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFE 236
+S+REDLIKDA++A+RETLQGETLKSS+CTVA++G EPFH LDQE +QK+ID+FE
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFE 236
>sp|P52428|PSA1_ORYSJ Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica
GN=PAF1 PE=2 SV=1
Length = 270
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/240 (75%), Positives = 209/240 (87%), Gaps = 5/240 (2%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSA +GLRS+TH VL NKA SELSSHQ
Sbjct: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
+K+F+V DH GVA+AGLTADGRVLSR++RSECIN+++ Y++PLPV RL ++LADKAQVCT
Sbjct: 61 RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QRSWKRPYGVGLLVAGLDE GAHLYYNCPSGNYFEYQAFAIGSRSQAAKT+LERRFE ++
Sbjct: 121 QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180
Query: 181 ESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAG-----EPFHILDQETVQKLIDSF 235
+ T E LIKDAL AI+ETLQGE L SS CTVA+VG EPF ++D + +Q++IDS
Sbjct: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIIDSM 240
>sp|Q27562|PSA1_DICDI Proteasome subunit alpha type-1 OS=Dictyostelium discoideum
GN=psmA1 PE=3 SV=1
Length = 248
Score = 291 bits (746), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 135/238 (56%), Positives = 182/238 (76%), Gaps = 2/238 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
M+RNQYD+D+TT+SP+GR+ Q+EYAMEAVKQG AA+ L+SK VL + +++SEL S+Q
Sbjct: 1 MYRNQYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSELGSYQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KKIF VDDH+G+AI+GLTAD R+L YMR+EC NY+Y YES + V RLV ++ADK QV T
Sbjct: 61 KKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QR +RPYGVGLLVAG D+ GAH+Y CPSGN+++Y++ +IGSRSQ+AKTYLE+ FE+F
Sbjct: 121 QRYGRRPYGVGLLVAGYDQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFE 180
Query: 181 ESTREDLIKDALMAIRETLQG--ETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFE 236
E T E LI L A+RET+ +TL S ++ +VG G+PF I+++ Q ++ E
Sbjct: 181 ECTLEQLITHGLRALRETIPNTDDTLNSKNVSIGIVGEGQPFKIIEEADAQPYLNLLE 238
>sp|Q9R1P4|PSA1_MOUSE Proteasome subunit alpha type-1 OS=Mus musculus GN=Psma1 PE=1 SV=1
Length = 263
Score = 279 bits (714), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/256 (52%), Positives = 175/256 (68%), Gaps = 8/256 (3%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL + +A SEL++HQ
Sbjct: 1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KKI VD+HIG++IAGLTAD R+L +MR EC++ + ++ PLPV RLV + K Q+ T
Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QR +RPYGVGLL+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180
Query: 181 ESTREDLIKDALMAIRETLQGET-LKSSICTVAVVGAGEPFHILDQETVQKLIDSFEIAG 239
E ++L+K L A+RETL E L + ++ +VG F I D + V +D G
Sbjct: 181 ECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLD-----G 235
Query: 240 TEEGP--AAAPDSAAE 253
EE P A P AAE
Sbjct: 236 LEERPQRKAQPSQAAE 251
>sp|P18420|PSA1_RAT Proteasome subunit alpha type-1 OS=Rattus norvegicus GN=Psma1 PE=1
SV=2
Length = 263
Score = 276 bits (706), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/255 (50%), Positives = 174/255 (68%), Gaps = 2/255 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL + +A SEL++HQ
Sbjct: 1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KKI VD+HIG++IAGLTAD R+L +MR EC++ + ++ PLPV RLV + K Q+ T
Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QR +RPYGVGLL+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180
Query: 181 ESTREDLIKDALMAIRETLQGET-LKSSICTVAVVGAGEPFHILDQETVQKLIDSFEIAG 239
+ ++L+K L A+RETL E L + ++ +VG F I D + V +D E
Sbjct: 181 QCNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLEERP 240
Query: 240 TEEG-PAAAPDSAAE 253
+ P+ A D AE
Sbjct: 241 QRKAQPSQAADEPAE 255
>sp|P25786|PSA1_HUMAN Proteasome subunit alpha type-1 OS=Homo sapiens GN=PSMA1 PE=1 SV=1
Length = 263
Score = 275 bits (703), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/255 (50%), Positives = 172/255 (67%), Gaps = 2/255 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL + +A SEL++HQ
Sbjct: 1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KKI VD+HIG++IAGLTAD R+L +MR EC++ + ++ PLPV RLV + K Q+ T
Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QR +RPYGVGLL+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180
Query: 181 ESTREDLIKDALMAIRETLQGET-LKSSICTVAVVGAGEPFHILDQETVQKLIDSFEIAG 239
E +L+K L A+RETL E L + ++ +VG F I D + V ++ E
Sbjct: 181 ECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERP 240
Query: 240 TEEG-PAAAPDSAAE 253
+ PA D AE
Sbjct: 241 QRKAQPAQPADEPAE 255
>sp|Q5REN2|PSA1_PONAB Proteasome subunit alpha type-1 OS=Pongo abelii GN=PSMA1 PE=2 SV=1
Length = 263
Score = 275 bits (702), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/255 (50%), Positives = 172/255 (67%), Gaps = 2/255 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL + +A SEL++HQ
Sbjct: 1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KKI VD+HIG++IAGLTAD R+L +MR EC++ + ++ PLPV RLV + K Q+ T
Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QR +RPYGVGLL+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180
Query: 181 ESTREDLIKDALMAIRETLQGET-LKSSICTVAVVGAGEPFHILDQETVQKLIDSFEIAG 239
E +L+K L A+RETL E L + ++ +VG F I D + V ++ E
Sbjct: 181 ECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIHDDDDVSPFLEGLEERP 240
Query: 240 TEEG-PAAAPDSAAE 253
+ PA D AE
Sbjct: 241 QRKAQPAQPADEPAE 255
>sp|Q3T0X5|PSA1_BOVIN Proteasome subunit alpha type-1 OS=Bos taurus GN=PSMA1 PE=1 SV=1
Length = 263
Score = 274 bits (700), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 125/237 (52%), Positives = 166/237 (70%), Gaps = 1/237 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL + +A SEL++HQ
Sbjct: 1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KKI VD+HIG++IAGLTAD R+L +MR EC++ + ++ PLPV RLV + K Q+ T
Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QR +RPYGVGLL+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180
Query: 181 ESTREDLIKDALMAIRETLQGET-LKSSICTVAVVGAGEPFHILDQETVQKLIDSFE 236
E +L+K L A+RETL E L + ++ +VG F I D + V ++ E
Sbjct: 181 ECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLE 237
>sp|Q4R3H2|PSA1_MACFA Proteasome subunit alpha type-1 OS=Macaca fascicularis GN=PSMA1
PE=2 SV=1
Length = 263
Score = 273 bits (698), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 129/255 (50%), Positives = 172/255 (67%), Gaps = 2/255 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL + +A SEL++H+
Sbjct: 1 MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHR 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KKI VD+HIG++IAGLTAD R+L +MR EC++ + ++ PLPV RLV + K Q+ T
Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QR +RPYGVGLL+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180
Query: 181 ESTREDLIKDALMAIRETLQGET-LKSSICTVAVVGAGEPFHILDQETVQKLIDSFEIAG 239
E +L+K L A+RETL E L + ++ +VG F I D + V ++ E
Sbjct: 181 ECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERP 240
Query: 240 TEEG-PAAAPDSAAE 253
+ PA D AE
Sbjct: 241 QRKAQPAQPADEPAE 255
>sp|P12881|PSA1_DROME Proteasome subunit alpha type-1 OS=Drosophila melanogaster
GN=Pros35 PE=1 SV=1
Length = 279
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 167/236 (70%), Gaps = 4/236 (1%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYD+DVT WSP GRL QVEYAMEAVK G+A +GL++K + VL + K SELS Q
Sbjct: 1 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
+KI +DDH+G++IAGLTAD RVLSRY+RSEC+NY ++Y++ PV RL+ L +K Q T
Sbjct: 61 RKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
QR +RPYGVGLLVAG DE+G H+Y PS +F +A +IGSRSQ+A+TYLE+ F
Sbjct: 121 QRYDRRPYGVGLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFL 180
Query: 181 ESTREDLIKDALMAIRETL----QGETLKSSICTVAVVGAGEPFHILDQETVQKLI 232
+S+++++I+ + AI TL QG+ TVA+VG +PF IL + K +
Sbjct: 181 DSSKDEIIRHGIRAILGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAKHV 236
>sp|O42265|PSA1_CHICK Proteasome subunit alpha type-1 OS=Gallus gallus GN=PSMA1 PE=2 SV=2
Length = 260
Score = 257 bits (656), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 166/247 (67%), Gaps = 2/247 (0%)
Query: 8 TDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQKKIFKVD 67
+DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL + +A SEL++HQKKI VD
Sbjct: 7 SDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILYVD 66
Query: 68 DHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRP 127
+HIG++IAGLTAD R+L +MR EC++ + ++ PLPV RLV + K Q+ TQR +RP
Sbjct: 67 NHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRP 126
Query: 128 YGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDL 187
YGVGLL+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+ YLER F++ +L
Sbjct: 127 YGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARNYLERHMTEFTDCNLNEL 186
Query: 188 IKDALMAIRETLQGET-LKSSICTVAVVGAGEPFHILDQETVQKLIDSFEIAGTEEGPAA 246
+K L A+RETL E L + ++ +VG F I D + V ++ E + PA
Sbjct: 187 VKHGLRALRETLPAEQDLTTKNVSIGIVGKDMEFTIYDDDDVAPFLEGLE-ERPQRKPAL 245
Query: 247 APDSAAE 253
D AE
Sbjct: 246 PADEPAE 252
>sp|O14250|PSA6_SCHPO Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC6G10.04c PE=3
SV=1
Length = 272
Score = 254 bits (648), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 163/236 (69%), Gaps = 1/236 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYD D TTWSP GRL QVEYA+EA+KQGSA +GL SKTH VL + + ELSS+Q
Sbjct: 1 MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KK+ ++DDHIG+AIAGL D RVLS YM+ E ++ + P+PV RL+ ++A+KAQ+ T
Sbjct: 61 KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
Q +RPYGVG LV G DE G HL PSG EY ++GSRSQ+A+TY+ER + F
Sbjct: 121 QEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFP 180
Query: 181 ESTREDLIKDALMAIRETL-QGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSF 235
+S+RE+LI AL A+R+TL + + L +++V+G E + + DQ ++ +D
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQNDTKEWLDKL 236
>sp|P92188|PSA1_TRYCR Proteasome subunit alpha type-1 OS=Trypanosoma cruzi PE=2 SV=1
Length = 265
Score = 249 bits (635), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 171/239 (71%), Gaps = 2/239 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKAN-SELSSH 59
MF+NQYDT+ TTWSP GRLFQVEYA EAV GSAA+G ++K VVL + ++ ++ SS+
Sbjct: 1 MFKNQYDTNTTTWSPTGRLFQVEYANEAVNNGSAAVGAKNKDFVVLTALKRSPVAQFSSY 60
Query: 60 QKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVC 119
Q+K+FK+DDH+G+AIAGL ADGR+L+R++R+EC+NY Y ++S P+ + + +K Q
Sbjct: 61 QEKVFKLDDHVGMAIAGLVADGRMLARFVRTECMNYRYMHDSDNPLPLIAEIVGEKYQRH 120
Query: 120 TQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENF 179
Q + KRP+GVGLL+AG D G HLY+ PSG+ F+++A A+G RSQAA+TYLE+ FE+F
Sbjct: 121 IQFAGKRPFGVGLLIAGYDSTGPHLYHTVPSGDVFDFKATAMGLRSQAARTYLEKHFESF 180
Query: 180 SESTREDLIKDALMAI-RETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFEI 237
+ ++LI AL A+ T G L T+A+VG G PF +L +E +K +D F++
Sbjct: 181 PDCGLDELIMHALKALAAATSGGAELNIKNTTIAIVGKGTPFMVLTEEAARKYLDGFKM 239
>sp|O44156|PSA1_CAEEL Proteasome subunit alpha type-1 OS=Caenorhabditis elegans GN=pas-6
PE=1 SV=1
Length = 260
Score = 240 bits (613), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 161/229 (70%), Gaps = 1/229 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRNQYD DVT WSP GRL QVEYA+EA+KQGSA +G++S+TH V+ + +A ++LSSHQ
Sbjct: 1 MFRNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KK++++D H GV+IAGL +DGR+L+RY+++EC ++ + Y+ +P+ +L + K Q T
Sbjct: 61 KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
Q +RP+GVG+L+AG D+ GAH+ PS +IG+RSQ+A+TYLER +NF
Sbjct: 121 QYYGRRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFE 180
Query: 181 ESTREDLIKDALMAIRETLQG-ETLKSSICTVAVVGAGEPFHILDQETV 228
+ST E LI AL+A+R+TL E L + ++ +VG PF +L+ V
Sbjct: 181 KSTPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSLLEDAQV 229
>sp|O96788|PSA1_TRYBR Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense
PE=2 SV=1
Length = 266
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 167/249 (67%), Gaps = 3/249 (1%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKAN-SELSSH 59
MF+NQYDTD TTWSP GRLFQVEYA EAV GSAA+G++ +VVL + + S LSS+
Sbjct: 1 MFKNQYDTDTTTWSPTGRLFQVEYANEAVNNGSAAVGVKGADYVVLTALKRNPVSGLSSY 60
Query: 60 QKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVC 119
Q+K FK+D+H+G+AI+GL ADGR LSR++R+EC+NY Y ++S P+ L + K Q
Sbjct: 61 QEKAFKLDEHVGMAISGLVADGRALSRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRH 120
Query: 120 TQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENF 179
Q + KRP+GVGLL+AG D +G LY PSG+ F+++A A+G RSQAA+TYLER F F
Sbjct: 121 IQFAGKRPFGVGLLIAGYDRQGPRLYQTVPSGDVFDFKATAMGLRSQAARTYLERHFRGF 180
Query: 180 SESTREDLIKDALMAI-RETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFEIA 238
++L+ AL A+ T G L T+A+VG G PF IL +E +K +D F+
Sbjct: 181 PACDLDELVMHALRALGAATSGGVELNIKNTTIAIVGKGTPFTILTEEEARKYLDGFKTR 240
Query: 239 GTEEGPAAA 247
E+ PA A
Sbjct: 241 -PEDIPAVA 248
>sp|P40302|PSA6_YEAST Proteasome subunit alpha type-6 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE5 PE=1 SV=1
Length = 234
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/234 (50%), Positives = 149/234 (63%), Gaps = 2/234 (0%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
MFRN YD D T+SP GRLFQVEYA+EA+KQGS +GLRS TH VL + + ELSS+Q
Sbjct: 1 MFRNNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADELSSYQ 60
Query: 61 KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
KKI K D+H+G+++AGL D RVLS Y+R +C S + L V R L DKAQ T
Sbjct: 61 KKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNT 120
Query: 121 QRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENF- 179
Q RPYGVGLL+ G D+ GAHL PSGN E AIG+RSQ AKTYLER + F
Sbjct: 121 QSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFI 180
Query: 180 -SESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 232
+ ++LIK + AI ++L+ E+L ++A+VG PF I D E V K I
Sbjct: 181 KIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI 234
>sp|Q9UT97|PSA5_SCHPO Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pup2 PE=1 SV=1
Length = 247
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 140/234 (59%), Gaps = 11/234 (4%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL-SSH 59
M R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++K VVLG + S L SH
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESH 62
Query: 60 Q-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-- 116
+K+F++D HIG AI+GLTAD R + + R + N+ +TY+ P + + D A
Sbjct: 63 SVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALR 122
Query: 117 ----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYL 172
+ +R RP+GV LL+AG+DE G LY++ PSG YF Y+A AIGS S+ AK+ L
Sbjct: 123 FGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSEL 182
Query: 173 ERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQE 226
+ F + T E+ L +R+ ++ E L S +A V A FHI + E
Sbjct: 183 VKEFHK--DMTLEEAEVLILKVLRQVME-EKLDSKNVQLAKVTAEGGFHIYNDE 233
>sp|P52427|PSA4_SPIOL Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2
SV=1
Length = 250
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 146/236 (61%), Gaps = 10/236 (4%)
Query: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQK 61
+YD+ T +SP GRL+QVEYAMEA+ +AIG+ +K VVL K S+L S+ +
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTSTSTE 63
Query: 62 KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQ 121
K++K+DDH+ A+AG+ +D +L R + Y+++Y+ P+PV +LV L D Q TQ
Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQ 123
Query: 122 RSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
RP+GV L AG D+ G LY + PSGNY ++A AIG+ +QAA++ L++ +++
Sbjct: 124 FGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKD-- 181
Query: 181 ESTREDLIKDALMAIRETLQGETLKS---SICTVAVVGAGE-PFHILDQETVQKLI 232
+ TRED +K AL A+ +T+ +L S + V ++ +G+ + + E++ +L+
Sbjct: 182 DVTREDAVKLALKALSKTMDSTSLTSEKLELAEVYLLPSGKVKYQVHSPESLNRLL 237
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 140/244 (57%), Gaps = 18/244 (7%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKI 63
YD +T +SP GRLFQVEYA EAVK+G+ A+G++ + VVLG + S+L + +K+
Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKV 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
+++D HIG A AGL AD RVL R E Y YTY P+ V LV + D QV TQ
Sbjct: 70 YQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+G LL+AG+D KG L+ PSG E++A AIG Q A + F E
Sbjct: 130 GVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEA-------LDVFEEEY 182
Query: 184 REDL-----IKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFEIA 238
RED+ I+ A+ A+ E + ET ++ +AVV + F L+++ ++++ + +
Sbjct: 183 REDMTLQEAIELAVRALYEASREETTADNL-EIAVVDK-QGFRKLERKKIEEMFER--VV 238
Query: 239 GTEE 242
G+EE
Sbjct: 239 GSEE 242
>sp|O81148|PSA4_ARATH Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1
PE=1 SV=1
Length = 250
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 142/236 (60%), Gaps = 10/236 (4%)
Query: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQK 61
+YD+ T +SP GRL+QVEYAMEA+ +AIG+ SK VVL K S+L S+ +
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAE 63
Query: 62 KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQ 121
K++K+DDH+ A+AG+ +D +L R + Y++ Y+ P+PV +LV L D Q TQ
Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQ 123
Query: 122 RSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
RP+GV L AG D+ G LY + PSGNY ++A A+G+ +QAA++ L++ +++
Sbjct: 124 FGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKD-- 181
Query: 181 ESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGEPFHILDQETVQKLI 232
++TRE+ ++ AL + +T+ +L S +A V +H+ E++ KL+
Sbjct: 182 DATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKYHVHSPESLTKLL 237
>sp|Q54DM7|PSA2_DICDI Proteasome subunit alpha type-2 OS=Dictyostelium discoideum
GN=psmA2 PE=3 SV=1
Length = 232
Score = 154 bits (388), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 137/220 (62%), Gaps = 6/220 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANS--ELSSHQKKI 63
Y +TT+SP+G+L Q+E+A++A G +AIG+++K VVL K +S +++S QK I
Sbjct: 5 YSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHSLVDVTSVQK-I 63
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
+ ++IG+ AG+ D RVL + R E Y Y+ +PV +LV +LA Q TQ
Sbjct: 64 SMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSG 123
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+GV LLVAG DEKG HLY PSG+YF ++A AIG ++KT+LE+R+ + E
Sbjct: 124 GVRPFGVSLLVAGFDEKGPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEI- 182
Query: 184 REDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHIL 223
ED I+ AL+ I+E + + + ++ +A++G + F IL
Sbjct: 183 -EDAIQTALITIKEGFETQLTEFNM-ELAIIGKNQEFKIL 220
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 136/231 (58%), Gaps = 8/231 (3%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKI 63
YD +T +SP GRLFQV+YA EAVK+G+ A+G++ K VVL + S+L + +KI
Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKI 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F++DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q+ TQ
Sbjct: 70 FQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+G LL+AG++EK L+ PSG YFE++A AIGS A E ++ + E T
Sbjct: 130 GVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRD--EMT 186
Query: 184 REDLIKDALMAIRETLQGETLKSSICTVAVVGAGE-PFHILDQETVQKLID 233
E+ IK A++A+ + ++ + +S VAV+ E F + E V K ++
Sbjct: 187 LEEAIKLAVLALSKIMEEPSPES--IEVAVISVKEKKFKKITPEEVAKCLE 235
>sp|Q9PTW9|PSA7_CARAU Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2
SV=1
Length = 251
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 138/233 (59%), Gaps = 10/233 (4%)
Query: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KK 62
+YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +K
Sbjct: 4 RYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRK 63
Query: 63 IFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQR 122
I +D+H+ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ
Sbjct: 64 ICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQS 123
Query: 123 SWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSE 181
+ +RP+G+ L+ G D G LY PSG Y ++A AIG ++ + +LE+ + + +
Sbjct: 124 NGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAI 183
Query: 182 STREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 232
++ D IK A+ A+ E +Q G+ ++ +AV+ +P IL+ + ++ L+
Sbjct: 184 ASDNDAIKLAIKALLEVVQSGGKNIE-----LAVIRRNQPLKILESKEIETLV 231
>sp|O82530|PSA4_PETHY Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2
SV=1
Length = 249
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 132/214 (61%), Gaps = 6/214 (2%)
Query: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQK 61
+YD+ T +SP GRL+QVEYAMEA+ +AIG+ SK VVL K S+L S+ +
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSE 63
Query: 62 KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQ 121
K++K+DDH+ A+AG+ +D +L R + Y+++Y+ P+PV +LV L D Q TQ
Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQ 123
Query: 122 RSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
P+GV L AG D+ G L+ + PSGNY ++A AIG+ +QAA++ L++ +++
Sbjct: 124 YGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKD-- 181
Query: 181 ESTREDLIKDALMAIRETLQGETLKSSICTVAVV 214
+ TRE+ ++ AL + +T+ +L S +A V
Sbjct: 182 DITREEAVQLALKVLSKTMDSTSLTSEKLELAEV 215
>sp|P34120|PSA7_DICDI Proteasome subunit alpha type-7 OS=Dictyostelium discoideum
GN=psmA7 PE=3 SV=1
Length = 250
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 136/235 (57%), Gaps = 9/235 (3%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ 60
M +YD +T +SP G LFQVEYAMEAV++G+ A+G+R K +VLG KA ++L +
Sbjct: 1 MSSARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKLQDAR 60
Query: 61 --KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQV 118
+KI K+DDHI + AGLTAD RVL EC +Y T E V + +A Q
Sbjct: 61 SIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQR 120
Query: 119 CTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 177
TQ RP+G+ L+ G D G +LY PSG+Y ++A AIG S++ +LE+
Sbjct: 121 YTQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEK--- 177
Query: 178 NFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 232
N+++ + E+ IK A+ A+ E ++ + +AV+ +P +LD++ + KL+
Sbjct: 178 NYTDVSEEESIKLAVRALLEIVES---GNKNIEIAVIRNKQPIVLLDEQEIDKLV 229
>sp|O81149|PSA5A_ARATH Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1
PE=1 SV=1
Length = 237
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 110/181 (60%), Gaps = 5/181 (2%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SS 58
+ R +YD V T+SP GRLFQVEYA+EA+K GS AIG+++K VVL + S L S
Sbjct: 3 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS 62
Query: 59 HQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQV 118
+KI ++DDHIG A++GL AD R L + R E N+ ++Y P+ V L D A
Sbjct: 63 SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALR 122
Query: 119 C---TQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERR 175
+ S RP+GV LL+AG DE G LYY PSG +++ A AIGS S+ A + L+ +
Sbjct: 123 FGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ 182
Query: 176 F 176
F
Sbjct: 183 F 183
>sp|Q42134|PSA5B_ARATH Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2
PE=1 SV=2
Length = 237
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 110/181 (60%), Gaps = 5/181 (2%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SS 58
+ R +YD V T+SP GRLFQVEYA+EA+K GS AIG+++K VVL + S L S
Sbjct: 3 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS 62
Query: 59 HQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQV 118
+KI ++DDHIG A++GL AD R L + R E N+ ++Y P+ V L D A
Sbjct: 63 SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALR 122
Query: 119 C---TQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERR 175
+ S RP+GV LL+AG DE G LYY PSG +++ A AIGS S+ A + L+ +
Sbjct: 123 FGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ 182
Query: 176 F 176
F
Sbjct: 183 F 183
>sp|Q9XZG5|PSA5_TRYBB Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3
SV=1
Length = 246
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 137/245 (55%), Gaps = 17/245 (6%)
Query: 1 MF--RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL-- 56
MF + +YD V T+SP GR+FQ+EYA+EA+K GS ++G+++ V++ + S L
Sbjct: 1 MFSSKTEYDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVD 60
Query: 57 SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGR-------LV 109
S KI ++D HIG ++G+ AD R+L + R E N+ +TY+ P+ V L
Sbjct: 61 PSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLS 120
Query: 110 VQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAK 169
VQ + ++ RP+GV LL+AG+DE G L+ PSG Y Y A AIG ++AA+
Sbjct: 121 VQFGESG--GRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQ 178
Query: 170 T-YLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETV 228
T + ER N + E+L + +R+ ++ + K+S+ V + I DQE +
Sbjct: 179 TVFSERYHRNMTVEEAENL---TVQILRQVMEEKLTKTSVEIAIVPVSTGRLQIYDQEQI 235
Query: 229 QKLID 233
Q++ID
Sbjct: 236 QRIID 240
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGC-VNKANSELSSHQ-KKI 63
YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T
Sbjct: 130 GVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKE--DLT 187
Query: 184 REDLIKDALMAIRETLQ 200
ED I AL A+ TL+
Sbjct: 188 IEDTILLALKALSATLK 204
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGC-VNKANSELSSHQ-KKI 63
YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T
Sbjct: 130 GVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKE--DLT 187
Query: 184 REDLIKDALMAIRETLQ 200
ED I AL A+ TL+
Sbjct: 188 IEDTILLALKALSATLK 204
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGC-VNKANSELSSHQ-KKI 63
YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T
Sbjct: 130 GVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKE--DLT 187
Query: 184 REDLIKDALMAIRETLQ 200
ED I AL A+ TL+
Sbjct: 188 IEDTILLALKALSATLK 204
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGC-VNKANSELSSHQ-KKI 63
YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T
Sbjct: 130 GVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKE--DLT 187
Query: 184 REDLIKDALMAIRETLQ 200
ED I AL A+ TL+
Sbjct: 188 IEDTILLALKALSATLK 204
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGC-VNKANSELSSHQ-KKI 63
YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T
Sbjct: 130 GVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKE--DLT 187
Query: 184 REDLIKDALMAIRETLQ 200
ED I AL A+ TL+
Sbjct: 188 IEDTILLALKALSATLK 204
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGC-VNKANSELSSHQ-KKI 63
YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+GV L++AG+D+ LY PSG Y YQA AIG A +LE+ ++ + T
Sbjct: 130 GVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKE--DLT 187
Query: 184 REDLIKDALMAIRETLQ 200
ED I AL A+ TL+
Sbjct: 188 IEDTILLALKALSATLK 204
>sp|Q94561|PSA5_ENTHI Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2
Length = 247
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 140/240 (58%), Gaps = 11/240 (4%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSE--LSS 58
M +N+ D V T+S GRLFQVEYA EA+K GS IG+++K VVL + +S L S
Sbjct: 3 MTKNENDHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGS 62
Query: 59 HQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQV 118
+KI ++DDHIG A++GLTAD R L R E N+ + Y+ P+ V + ++D +
Sbjct: 63 SIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLR 122
Query: 119 CTQRSWK-----RPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLE 173
+ S K RP+GV LL+AG+DE G L+ PSG + E+ A A G+ ++AA++ L
Sbjct: 123 FGEGSRKKKVMSRPFGVALLIAGVDETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSILH 182
Query: 174 RRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGA-GEPFHILDQETVQKLI 232
++ N S + RE I AL +++ ++ E L S VA+V + F I+D ++ LI
Sbjct: 183 EKY-NKSMTLREAEIL-ALSTLKQVME-EKLNSKNVEVALVTVEKKKFEIMDTAFIENLI 239
>sp|Q9M4T8|PSA5_SOYBN Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1
Length = 237
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 109/181 (60%), Gaps = 5/181 (2%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SS 58
+ R +YD V T+SP GRLFQVEYA+EA+K GS AIGL++K VVL + S L S
Sbjct: 3 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS 62
Query: 59 HQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQV 118
+KI ++D+HIG A++GL AD R L + R E N+ ++Y P+ V L D A
Sbjct: 63 SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALR 122
Query: 119 C---TQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERR 175
+ S RP+GV LL+AG DE G LYY PSG +++ AIGS S+ A + L+ +
Sbjct: 123 FGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQ 182
Query: 176 F 176
F
Sbjct: 183 F 183
>sp|Q9LSU1|PSA5_ORYSJ Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica
GN=PAE1 PE=2 SV=1
Length = 237
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SS 58
+ R +YD V T+SP GRLFQVEYA+EA+K GS AIGL++K VVL + S L S
Sbjct: 3 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS 62
Query: 59 HQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPV---GRLVVQLADK 115
+KI ++D+HIG A++GL AD R L + R E N+ ++Y P+ V + + LA +
Sbjct: 63 SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALR 122
Query: 116 AQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERR 175
+ S RP+GV LL+AG DE G LYY PSG +++ A AIGS S+ A + L+ +
Sbjct: 123 FGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ 182
Query: 176 F 176
+
Sbjct: 183 Y 183
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 130/230 (56%), Gaps = 6/230 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKI 63
YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S L S +KI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKI 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F++DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ
Sbjct: 70 FQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+G LL+AG++EK LY PSG YFE++A AIGS A E + + +
Sbjct: 130 GVRPFGAALLMAGVNEK-PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSD--DID 186
Query: 184 REDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 233
E IK A++A+ +TL+ E SI + + + LD+E V K ++
Sbjct: 187 MEGAIKLAILALAKTLE-EPSPESIEVAYITLDEKRWKKLDKEEVAKYLN 235
>sp|A5UJS2|PSA_METS3 Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1
Length = 250
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 128/231 (55%), Gaps = 6/231 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKI 63
YD +T +SP GRLFQVEYA EAVK+G+ +IG++ +VL + S L ++ +KI
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKI 68
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
FK+D+HIG A +GL AD R L R E TY P+ V L +L D Q+ TQ
Sbjct: 69 FKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNG 128
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+G L++ G+ + L+ PSG EY+A AIGS AA E ++++ +
Sbjct: 129 GVRPFGSALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKD--DMN 186
Query: 184 REDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHI-LDQETVQKLID 233
+ I AL AI E + ET +++ +AV+ GE + L QE VQ ID
Sbjct: 187 LNEAINLALTAINEATEHETTANNV-EIAVIKCGEEVYTKLSQEEVQTFID 236
>sp|Q9U793|PSA2_TRYBB Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 231
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 127/226 (56%), Gaps = 6/226 (2%)
Query: 10 VTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVD 67
+TT+SP+GRL Q+EYA A +G+ A+G+++ VV+ K S L S K+F +D
Sbjct: 8 LTTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALD 67
Query: 68 DHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRP 127
DH+G +G+ D RVL R C Y TY P+P+ +LV Q++ Q TQ RP
Sbjct: 68 DHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRP 127
Query: 128 YGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDL 187
+G LLVAG D +G HLY PSG ++ ++A +IG S A+T+LE+R+ N E ED
Sbjct: 128 FGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTN--EMEIEDA 185
Query: 188 IKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 233
+ AL+ ++E G + + V V G F +L E ++ +D
Sbjct: 186 VHTALLTLKEGFDGR-MTAENTQVGRVVEGR-FELLTVEQLKDYLD 229
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 147 bits (371), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 130/229 (56%), Gaps = 6/229 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKI 63
YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S+L S +KI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKI 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F++DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ
Sbjct: 70 FQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+G LL+AG+++K LY PSG YFE++A AIGS A E + + +
Sbjct: 130 GVRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSD--DLD 186
Query: 184 REDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 232
E IK A++A+ +TL+ E SI + + + +D+E V K +
Sbjct: 187 MEGAIKLAILALAKTLE-EPSPESIEVAYITMKDKRWKKMDKEEVAKYL 234
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 133/233 (57%), Gaps = 8/233 (3%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKI 63
YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S+L S +KI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKI 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F +DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ
Sbjct: 70 FLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+G LL+AG++EK L+ PSG YFE++A AIGS A E + + +
Sbjct: 130 GVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRD--DIG 186
Query: 184 REDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQKLIDSF 235
++D IK A++A+ +TL+ T + VA + E + L +E ++K I+
Sbjct: 187 KDDAIKLAILALAKTLEEPTAEG--IEVAYITMDEKRWKKLPREELEKYINEI 237
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 128/229 (55%), Gaps = 6/229 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKI 63
YD +T +SP GRLFQV YA EAVK+G+ A+G++ VVL + S L +KI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKI 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F++DDHI A +G+ AD RVL R E Y TY P PV +V ++ D Q+ TQ
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+G LL+AG++++ LY PSG YF ++A AIGS A E ++ + +
Sbjct: 130 GVRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRD--DMN 186
Query: 184 REDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 232
ED IK ALMA+ +T++ + +I + + F L ++ ++K +
Sbjct: 187 LEDAIKLALMALAKTMENPS-ADNIEVAVITVKDKKFRKLTRDEIEKYL 234
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKI 63
YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S+L S +KI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKI 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F +DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ
Sbjct: 70 FLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+G LL+AG++EK L+ PSG YFE++A AIGS A E + + +
Sbjct: 130 GVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRD--DIG 186
Query: 184 REDLIKDALMAIRETLQGET 203
++D IK A++A+ +TL+ T
Sbjct: 187 KDDAIKLAILALAKTLEEPT 206
>sp|Q3ZBG0|PSA7_BOVIN Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1
Length = 248
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKI 63
YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKI 62
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
+DD++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ +
Sbjct: 63 CALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSN 122
Query: 124 WKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSES 182
+RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + +
Sbjct: 123 GRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIE 182
Query: 183 TREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 232
T + IK + A+ E +Q G+ ++ +AV+ +P IL+ E ++K +
Sbjct: 183 TDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILNPEEIEKYV 229
>sp|Q9Z2U0|PSA7_MOUSE Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1
Length = 248
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 136/232 (58%), Gaps = 10/232 (4%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKI 63
YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKI 62
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
+DD++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ +
Sbjct: 63 CALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSN 122
Query: 124 WKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSES 182
+RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + +
Sbjct: 123 GRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIE 182
Query: 183 TREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 232
T + IK + A+ E +Q G+ ++ +AV+ +P IL+ E ++K +
Sbjct: 183 TDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILNPEEIEKYV 229
>sp|Q9CWH6|PSA7L_MOUSE Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2
SV=1
Length = 250
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 136/238 (57%), Gaps = 10/238 (4%)
Query: 4 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--K 61
++YD +T +SP G LFQVEYA EAVK+GS A+G+R VVLG K+ ++L + +
Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVR 62
Query: 62 KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQ 121
KI +DDH+ +A AGLTAD RV+ R EC ++ T E P+ V + +A Q TQ
Sbjct: 63 KICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQ 122
Query: 122 RSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFS 180
+ +RP+G+ L+ G D+ G LY PSG Y ++A AIG ++ + +LE+ + +
Sbjct: 123 SNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDA 182
Query: 181 ESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFE 236
S ++ IK A+ A+ E +Q G+ ++ +A++ +P + + ++ + E
Sbjct: 183 ISNDKEAIKLAIKALLEVVQSGGKNIE-----LAIIRRDQPLKMFSAKEIELEVSEIE 235
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 134/233 (57%), Gaps = 12/233 (5%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKI 63
YD +T +SP GRLFQV YA EAVK+G+ A+G++ VVL + S L + +KI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKI 69
Query: 64 FKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRS 123
F++DDHI A +G+ AD RVL R E + TY P P+ +V ++ D Q+ TQ
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYG 129
Query: 124 WKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSEST 183
RP+G LL+AG++EK LY PSG YF ++A AIGS A E ++++ + +
Sbjct: 130 GVRPFGAALLMAGVNEK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKD--DMS 186
Query: 184 REDLIKDALMAIRETLQ---GETLKSSICTVAVVGAGEPFHILDQETVQKLID 233
E+ IK A+ A+ +T++ E ++ +I TV + F L +E ++K ++
Sbjct: 187 LEEAIKLAIFALAKTMEKPSAENIEVAIITV----KDKKFRKLSREEIEKYLN 235
>sp|Q9Z2U1|PSA5_MOUSE Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1
Length = 241
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 140/241 (58%), Gaps = 12/241 (4%)
Query: 1 MF--RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL-- 56
MF R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++ V L + S L
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
Query: 57 SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA 116
S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A
Sbjct: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
Query: 117 QVCTQR-----SWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTY 171
+ + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++
Sbjct: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
Query: 172 LERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKL 231
L+ + T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ +E ++++
Sbjct: 181 LQEVYHK--SMTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEV 237
Query: 232 I 232
I
Sbjct: 238 I 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,533,977
Number of Sequences: 539616
Number of extensions: 4236564
Number of successful extensions: 20648
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 19846
Number of HSP's gapped (non-prelim): 582
length of query: 279
length of database: 191,569,459
effective HSP length: 116
effective length of query: 163
effective length of database: 128,974,003
effective search space: 21022762489
effective search space used: 21022762489
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)