BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023624
MVATTSTISRAFSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFIT
LQEWQGWGAVSPLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATY
QTLGESEKKLQFFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYM
HPKDFLRQNNTGKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNAI
KMSVQDTLGYGSSEDLEYTPMMAVTQMLVLLHRLMEITL

High Scoring Gene Products

Symbol, full name Information P value
AT1G03687 protein from Arabidopsis thaliana 2.9e-80

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023624
        (279 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2825052 - symbol:AT1G03687 "AT1G03687" species...   806  2.9e-80   1


>TAIR|locus:2825052 [details] [associations]
            symbol:AT1G03687 "AT1G03687" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 InterPro:IPR005636
            Pfam:PF03942 IPI:IPI00536951 RefSeq:NP_171865.4 UniGene:At.42530
            EnsemblPlants:AT1G03687.1 GeneID:839052 KEGG:ath:AT1G03687
            OMA:LRQNNTG PhylomeDB:F4I2G3 Uniprot:F4I2G3
        Length = 381

 Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
 Identities = 151/245 (61%), Positives = 187/245 (76%)

Query:    12 FSFTCMFKLCRPLFALSTRTHMESPRVNSALRSPARETHIGDTDDGFITLQEWQGWGAVS 71
             FS + +F   R L A+  R  M S    S LRS  RE  +   D+G I+++EW+ WG VS
Sbjct:    12 FSPSLLFHR-RNLVAVGQRLLMTS----SILRSHTREFDV--CDEGIISVEEWRKWGPVS 64

Query:    72 PLPALVQQIVEDLKALEKNFDAPMSFGGNGGRLQGDFKILEDKKHRATYQTLGESEKKLQ 131
             P P+ V+QIV+DLK LE   D+P+ FGGNGG+LQG F   EDKKHRATY+ L + EKK +
Sbjct:    65 PFPSAVKQIVDDLKVLECKLDSPIDFGGNGGKLQGPFGAYEDKKHRATYEALDDPEKKFR 124

Query:   132 FFTARQIACRLLGSQGYLCQKCWIAMEDCMCSKVKHCSLWYGVRFWLYMHPKDFLRQNNT 191
             FF+ARQ+ACRLLGS+GYLCQKCW+AMEDCMCS VK C LW  +RFWLYMHP+DFLRQNNT
Sbjct:   125 FFSARQVACRLLGSRGYLCQKCWLAMEDCMCSYVKPCGLWKRIRFWLYMHPRDFLRQNNT 184

Query:   192 GKLLWQVLGVQAATLCLYGVAEDEEIMWSAFKRAGKSKVWCLYPNKNA-IKMSVQDTLGY 250
             GKLLWQ+ GVQ+ATLC++G+AEDEEIMW+ FKRAGKS+V CLYPN N+ +  SV+D  G 
Sbjct:   185 GKLLWQIFGVQSATLCVFGIAEDEEIMWNEFKRAGKSQVRCLYPNHNSEVTFSVKDAFGS 244

Query:   251 GSSED 255
              +SE+
Sbjct:   245 SASEN 249


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.135   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      279       279   0.00081  115 3  11 22  0.44    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  235 KB (2127 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.21u 0.10s 23.31t   Elapsed:  00:00:02
  Total cpu time:  23.21u 0.10s 23.31t   Elapsed:  00:00:02
  Start:  Fri May 10 11:39:19 2013   End:  Fri May 10 11:39:21 2013

Back to top