Query 023625
Match_columns 279
No_of_seqs 224 out of 2321
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 10:01:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023625.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023625hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 5.1E-49 1.7E-53 343.7 24.3 269 1-279 64-345 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 1.3E-46 4.6E-51 329.7 25.5 273 1-279 82-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 100.0 1.4E-45 4.8E-50 323.7 24.5 273 1-279 84-366 (368)
4 3lst_A CALO1 methyltransferase 100.0 1.1E-44 3.8E-49 316.1 25.7 268 1-279 76-347 (348)
5 1zg3_A Isoflavanone 4'-O-methy 100.0 2.2E-44 7.7E-49 315.3 23.4 274 1-279 69-358 (358)
6 1fp2_A Isoflavone O-methyltran 100.0 5.6E-44 1.9E-48 312.1 24.7 272 1-279 75-352 (352)
7 3gwz_A MMCR; methyltransferase 100.0 3.6E-44 1.2E-48 315.1 23.5 268 1-279 92-368 (369)
8 3i53_A O-methyltransferase; CO 100.0 5.8E-44 2E-48 309.7 18.8 265 1-279 59-331 (332)
9 2ip2_A Probable phenazine-spec 100.0 1.8E-42 6.3E-47 300.5 23.2 265 1-279 62-333 (334)
10 1fp1_D Isoliquiritigenin 2'-O- 100.0 2.4E-42 8.3E-47 303.9 23.6 274 1-279 89-372 (372)
11 1tw3_A COMT, carminomycin 4-O- 100.0 8.9E-40 3E-44 286.4 18.7 269 1-279 73-355 (360)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 1.2E-39 4E-44 287.1 18.3 269 1-279 70-355 (374)
13 3dp7_A SAM-dependent methyltra 100.0 7.5E-39 2.6E-43 280.6 18.7 266 1-279 71-354 (363)
14 2r3s_A Uncharacterized protein 100.0 4E-37 1.4E-41 266.9 19.9 264 1-278 60-333 (335)
15 3mcz_A O-methyltransferase; ad 100.0 4.5E-37 1.5E-41 268.4 20.3 259 1-279 77-348 (352)
16 1x19_A CRTF-related protein; m 100.0 2.4E-36 8.1E-41 264.5 22.9 254 1-279 85-358 (359)
17 4gek_A TRNA (CMO5U34)-methyltr 99.9 2.3E-21 8E-26 161.7 17.3 164 111-278 68-256 (261)
18 3dtn_A Putative methyltransfer 99.8 9.8E-20 3.3E-24 149.5 17.3 163 112-278 43-224 (234)
19 3hnr_A Probable methyltransfer 99.8 1.4E-18 4.6E-23 141.2 15.6 168 103-278 37-210 (220)
20 3ou2_A SAM-dependent methyltra 99.8 3.1E-18 1E-22 138.7 16.6 153 111-269 44-206 (218)
21 1ve3_A Hypothetical protein PH 99.8 1.9E-19 6.4E-24 146.9 8.2 162 112-279 37-226 (227)
22 3pfg_A N-methyltransferase; N, 99.8 2.1E-18 7.2E-23 144.0 14.2 163 111-278 48-247 (263)
23 3dh0_A SAM dependent methyltra 99.8 4.9E-18 1.7E-22 137.8 15.7 156 101-279 27-192 (219)
24 3ujc_A Phosphoethanolamine N-m 99.8 3.9E-18 1.3E-22 142.3 14.6 156 101-269 45-207 (266)
25 3bus_A REBM, methyltransferase 99.8 1.1E-17 3.6E-22 140.4 15.9 157 101-269 51-217 (273)
26 3dlc_A Putative S-adenosyl-L-m 99.8 7.4E-19 2.5E-23 142.3 8.3 157 115-278 45-213 (219)
27 3bxo_A N,N-dimethyltransferase 99.8 7.3E-18 2.5E-22 138.5 14.2 163 112-279 39-238 (239)
28 1xtp_A LMAJ004091AAA; SGPP, st 99.8 3.5E-18 1.2E-22 141.8 11.2 149 102-269 84-239 (254)
29 2qe6_A Uncharacterized protein 99.8 2.7E-17 9.1E-22 138.2 16.1 141 113-264 77-238 (274)
30 2o57_A Putative sarcosine dime 99.7 2.8E-17 9.5E-22 139.6 15.7 145 111-268 80-234 (297)
31 3vc1_A Geranyl diphosphate 2-C 99.7 4.1E-17 1.4E-21 139.7 16.7 155 101-269 106-270 (312)
32 3dli_A Methyltransferase; PSI- 99.7 4.5E-17 1.5E-21 134.2 16.2 141 111-269 39-185 (240)
33 1vl5_A Unknown conserved prote 99.7 6.6E-18 2.3E-22 140.8 11.3 153 101-268 27-190 (260)
34 3h2b_A SAM-dependent methyltra 99.7 8.3E-18 2.9E-22 134.9 11.0 139 114-270 42-184 (203)
35 1nkv_A Hypothetical protein YJ 99.7 2.9E-17 1E-21 136.4 14.6 152 102-268 27-187 (256)
36 1kpg_A CFA synthase;, cyclopro 99.7 3.4E-17 1.2E-21 138.4 15.0 161 102-268 55-228 (287)
37 3ocj_A Putative exported prote 99.7 1.3E-17 4.5E-22 142.3 11.9 165 111-278 116-302 (305)
38 3f4k_A Putative methyltransfer 99.7 5E-17 1.7E-21 135.0 14.6 144 111-269 44-197 (257)
39 3hem_A Cyclopropane-fatty-acyl 99.7 5E-17 1.7E-21 138.5 14.2 162 102-269 63-244 (302)
40 3kkz_A Uncharacterized protein 99.7 4.9E-17 1.7E-21 136.0 13.2 144 111-269 44-197 (267)
41 3lcc_A Putative methyl chlorid 99.7 2.3E-17 7.7E-22 135.5 10.9 133 114-269 67-208 (235)
42 4fsd_A Arsenic methyltransfera 99.7 6.8E-17 2.3E-21 142.1 14.4 145 112-267 82-250 (383)
43 3l8d_A Methyltransferase; stru 99.7 1.4E-16 4.7E-21 131.2 15.3 144 111-268 51-200 (242)
44 3mgg_A Methyltransferase; NYSG 99.7 2.8E-17 9.5E-22 138.1 11.2 153 111-268 35-198 (276)
45 3i9f_A Putative type 11 methyl 99.7 2E-17 6.7E-22 128.9 9.3 142 111-278 15-158 (170)
46 3jwg_A HEN1, methyltransferase 99.7 1.2E-16 4.3E-21 129.6 14.3 144 112-265 28-189 (219)
47 1xxl_A YCGJ protein; structura 99.7 4E-17 1.4E-21 134.4 11.4 151 103-268 13-174 (239)
48 1pjz_A Thiopurine S-methyltran 99.7 4.6E-17 1.6E-21 130.8 11.5 135 111-268 20-176 (203)
49 2ex4_A Adrenal gland protein A 99.7 4.1E-17 1.4E-21 134.5 11.3 139 113-269 79-226 (241)
50 3g2m_A PCZA361.24; SAM-depende 99.7 7.7E-17 2.6E-21 137.1 13.1 170 101-278 73-290 (299)
51 2fk8_A Methoxy mycolic acid sy 99.7 1.2E-16 4E-21 137.1 13.8 161 102-268 81-254 (318)
52 3e23_A Uncharacterized protein 99.7 6.3E-17 2.2E-21 130.6 11.3 138 111-268 41-182 (211)
53 3g5l_A Putative S-adenosylmeth 99.7 6.9E-17 2.3E-21 134.0 10.8 150 112-268 43-216 (253)
54 3jwh_A HEN1; methyltransferase 99.7 1.3E-16 4.3E-21 129.4 11.6 142 111-265 27-189 (217)
55 2p7i_A Hypothetical protein; p 99.7 3E-16 1E-20 129.3 13.9 148 112-267 41-198 (250)
56 3gu3_A Methyltransferase; alph 99.7 2E-16 6.9E-21 133.6 12.7 152 111-267 20-189 (284)
57 3ege_A Putative methyltransfer 99.7 6.4E-16 2.2E-20 128.9 14.7 151 101-268 24-178 (261)
58 3sm3_A SAM-dependent methyltra 99.7 4.2E-16 1.4E-20 127.4 13.4 149 111-267 28-206 (235)
59 3cgg_A SAM-dependent methyltra 99.7 6.8E-16 2.3E-20 122.4 13.8 127 111-268 44-175 (195)
60 3ccf_A Cyclopropane-fatty-acyl 99.7 1.8E-16 6.1E-21 133.5 10.9 154 101-268 47-210 (279)
61 3bkw_A MLL3908 protein, S-aden 99.7 2E-15 6.9E-20 124.1 16.7 152 111-268 41-214 (243)
62 1y8c_A S-adenosylmethionine-de 99.7 5.6E-16 1.9E-20 127.6 13.3 96 113-213 37-141 (246)
63 3d2l_A SAM-dependent methyltra 99.7 1.4E-15 4.8E-20 125.1 15.5 96 111-212 31-135 (243)
64 2p35_A Trans-aconitate 2-methy 99.7 2.6E-16 9.1E-21 130.7 10.3 148 102-262 24-184 (259)
65 3g07_A 7SK snRNA methylphospha 99.7 7.7E-17 2.6E-21 136.7 7.1 148 111-268 44-269 (292)
66 3bkx_A SAM-dependent methyltra 99.7 1.6E-15 5.4E-20 127.2 14.4 160 102-268 34-219 (275)
67 3e8s_A Putative SAM dependent 99.6 5.9E-16 2E-20 125.8 10.5 152 102-267 43-208 (227)
68 3ggd_A SAM-dependent methyltra 99.6 1.4E-15 4.7E-20 125.5 11.9 150 111-267 54-218 (245)
69 2xvm_A Tellurite resistance pr 99.6 3.8E-15 1.3E-19 118.7 14.0 142 103-268 24-173 (199)
70 2gb4_A Thiopurine S-methyltran 99.6 1.5E-15 5.1E-20 125.9 11.8 133 112-267 67-226 (252)
71 4htf_A S-adenosylmethionine-de 99.6 1.9E-15 6.4E-20 127.6 11.3 145 113-269 68-233 (285)
72 1vlm_A SAM-dependent methyltra 99.6 5.9E-15 2E-19 119.7 13.5 136 113-268 47-188 (219)
73 2yqz_A Hypothetical protein TT 99.6 3.7E-15 1.2E-19 124.0 12.0 146 111-266 37-194 (263)
74 3cc8_A Putative methyltransfer 99.6 3E-15 1E-19 121.9 10.8 156 101-268 23-185 (230)
75 2zfu_A Nucleomethylin, cerebra 99.6 9.7E-15 3.3E-19 118.0 12.4 130 102-278 57-189 (215)
76 3grz_A L11 mtase, ribosomal pr 99.6 1.4E-14 4.7E-19 116.2 12.8 132 111-279 58-196 (205)
77 3thr_A Glycine N-methyltransfe 99.6 2.3E-15 8E-20 127.4 7.6 100 111-215 55-176 (293)
78 3g5t_A Trans-aconitate 3-methy 99.6 1.5E-14 5E-19 123.0 12.2 99 112-216 35-151 (299)
79 1ri5_A MRNA capping enzyme; me 99.6 1.6E-14 5.6E-19 122.3 12.4 154 111-268 62-250 (298)
80 4hg2_A Methyltransferase type 99.6 1.2E-14 4.2E-19 120.6 10.8 98 112-218 38-139 (257)
81 2aot_A HMT, histamine N-methyl 99.6 1.9E-14 6.4E-19 121.9 11.9 141 113-265 52-218 (292)
82 2p8j_A S-adenosylmethionine-de 99.6 9.2E-15 3.1E-19 117.4 9.4 151 111-265 21-180 (209)
83 3m70_A Tellurite resistance pr 99.6 4.3E-14 1.5E-18 119.2 13.9 141 102-266 111-258 (286)
84 2a14_A Indolethylamine N-methy 99.6 2.6E-15 8.7E-20 125.4 5.7 140 112-268 54-238 (263)
85 2i62_A Nicotinamide N-methyltr 99.6 4.4E-15 1.5E-19 123.7 6.9 141 112-269 55-240 (265)
86 3e05_A Precorrin-6Y C5,15-meth 99.5 1.7E-13 5.7E-18 109.8 15.7 120 103-260 32-160 (204)
87 1wzn_A SAM-dependent methyltra 99.5 3.1E-13 1.1E-17 111.7 17.7 97 112-213 40-144 (252)
88 4e2x_A TCAB9; kijanose, tetron 99.5 5E-14 1.7E-18 125.2 12.9 149 101-269 97-254 (416)
89 3q87_B N6 adenine specific DNA 99.5 2.3E-13 7.9E-18 106.0 15.0 127 112-277 22-159 (170)
90 2g72_A Phenylethanolamine N-me 99.5 1.9E-14 6.4E-19 121.7 8.0 139 113-268 71-256 (289)
91 2kw5_A SLR1183 protein; struct 99.5 1.3E-13 4.4E-18 110.2 12.2 134 112-267 29-170 (202)
92 1fbn_A MJ fibrillarin homologu 99.5 2.4E-13 8.1E-18 111.1 13.9 141 111-278 72-226 (230)
93 3giw_A Protein of unknown func 99.5 1.3E-13 4.6E-18 114.1 12.0 143 112-264 77-243 (277)
94 3mq2_A 16S rRNA methyltransfer 99.5 1.6E-13 5.6E-18 111.0 12.1 143 111-268 25-184 (218)
95 2b3t_A Protein methyltransfera 99.5 7.8E-13 2.7E-17 111.0 15.7 135 112-278 108-274 (276)
96 3p2e_A 16S rRNA methylase; met 99.5 1.3E-13 4.3E-18 112.4 9.7 146 112-269 23-186 (225)
97 3hm2_A Precorrin-6Y C5,15-meth 99.5 3.3E-13 1.1E-17 105.4 11.3 117 111-265 23-150 (178)
98 2gs9_A Hypothetical protein TT 99.5 7.9E-14 2.7E-18 112.2 7.9 129 112-259 35-171 (211)
99 3htx_A HEN1; HEN1, small RNA m 99.5 6.7E-13 2.3E-17 123.7 14.5 100 112-215 720-835 (950)
100 4dzr_A Protein-(glutamine-N5) 99.5 6.1E-14 2.1E-18 112.8 6.4 136 112-278 29-203 (215)
101 3ofk_A Nodulation protein S; N 99.5 2.4E-13 8.1E-18 109.8 9.8 100 111-215 49-155 (216)
102 1af7_A Chemotaxis receptor met 99.5 4E-13 1.4E-17 112.2 11.2 97 113-212 105-250 (274)
103 1nt2_A Fibrillarin-like PRE-rR 99.5 1.4E-12 4.7E-17 105.1 13.9 137 111-279 55-209 (210)
104 3uwp_A Histone-lysine N-methyl 99.5 1.8E-13 6.2E-18 118.9 9.2 113 101-221 163-295 (438)
105 1dus_A MJ0882; hypothetical pr 99.5 1.1E-12 3.9E-17 103.5 13.1 140 102-278 43-192 (194)
106 3orh_A Guanidinoacetate N-meth 99.4 2.4E-14 8E-19 117.6 3.3 134 112-265 59-207 (236)
107 2qm3_A Predicted methyltransfe 99.4 3.3E-12 1.1E-16 111.8 15.9 97 113-216 172-279 (373)
108 2nxc_A L11 mtase, ribosomal pr 99.4 1.1E-12 3.9E-17 108.7 12.2 127 111-275 118-251 (254)
109 2ipx_A RRNA 2'-O-methyltransfe 99.4 1.1E-12 3.8E-17 107.3 11.5 139 111-277 75-229 (233)
110 4df3_A Fibrillarin-like rRNA/T 99.4 1.4E-12 4.9E-17 105.9 11.9 142 111-278 75-230 (233)
111 3njr_A Precorrin-6Y methylase; 99.4 3.2E-12 1.1E-16 102.5 13.6 116 111-266 53-178 (204)
112 2pxx_A Uncharacterized protein 99.4 5.7E-13 2E-17 107.2 8.9 102 111-216 40-161 (215)
113 3kr9_A SAM-dependent methyltra 99.4 4.1E-12 1.4E-16 102.7 13.8 131 111-278 13-156 (225)
114 2vdw_A Vaccinia virus capping 99.4 1E-12 3.4E-17 111.7 10.7 152 113-268 48-246 (302)
115 3mb5_A SAM-dependent methyltra 99.4 4E-13 1.4E-17 111.4 8.0 126 102-267 84-221 (255)
116 3iv6_A Putative Zn-dependent a 99.4 7.8E-13 2.7E-17 109.6 9.1 107 101-215 35-149 (261)
117 3m33_A Uncharacterized protein 99.4 3.1E-13 1.1E-17 110.1 6.4 115 112-268 47-167 (226)
118 1zx0_A Guanidinoacetate N-meth 99.4 1.2E-13 4.1E-18 113.3 3.9 101 112-216 59-172 (236)
119 3fpf_A Mtnas, putative unchara 99.4 1.4E-12 4.7E-17 109.3 10.2 95 111-214 120-222 (298)
120 1yb2_A Hypothetical protein TA 99.4 5.5E-13 1.9E-17 111.9 7.8 125 103-267 102-236 (275)
121 1xdz_A Methyltransferase GIDB; 99.4 1E-12 3.6E-17 108.0 8.9 121 112-267 69-201 (240)
122 3lec_A NADB-rossmann superfami 99.4 5.8E-12 2E-16 101.9 13.0 131 111-278 19-162 (230)
123 1yzh_A TRNA (guanine-N(7)-)-me 99.4 3.7E-12 1.3E-16 102.8 11.7 99 113-214 41-156 (214)
124 2h00_A Methyltransferase 10 do 99.4 5.9E-14 2E-18 116.4 1.0 145 113-268 65-238 (254)
125 3evz_A Methyltransferase; NYSG 99.4 4.5E-12 1.5E-16 103.3 12.1 130 111-271 53-209 (230)
126 3id6_C Fibrillarin-like rRNA/T 99.4 9.6E-12 3.3E-16 101.2 13.8 141 111-278 74-229 (232)
127 1g8a_A Fibrillarin-like PRE-rR 99.4 1.6E-11 5.6E-16 99.8 15.3 141 111-279 71-226 (227)
128 3eey_A Putative rRNA methylase 99.4 2E-12 6.9E-17 102.8 9.4 103 111-216 20-141 (197)
129 3bwc_A Spermidine synthase; SA 99.4 2.2E-12 7.5E-17 109.8 10.1 130 112-268 94-240 (304)
130 3fzg_A 16S rRNA methylase; met 99.4 4E-12 1.4E-16 99.1 10.5 97 111-214 47-152 (200)
131 3bgv_A MRNA CAP guanine-N7 met 99.4 4.6E-12 1.6E-16 108.2 11.9 100 112-215 33-156 (313)
132 3mti_A RRNA methylase; SAM-dep 99.4 2.9E-12 1E-16 100.8 9.7 100 111-215 20-136 (185)
133 1l3i_A Precorrin-6Y methyltran 99.4 5.6E-12 1.9E-16 99.3 11.3 114 111-262 31-154 (192)
134 1jsx_A Glucose-inhibited divis 99.4 2.5E-12 8.5E-17 103.1 9.3 92 113-213 65-164 (207)
135 3g89_A Ribosomal RNA small sub 99.3 1.4E-12 4.8E-17 107.8 7.7 122 112-268 79-212 (249)
136 3lpm_A Putative methyltransfer 99.3 1.2E-11 4.1E-16 102.8 13.3 125 111-268 46-201 (259)
137 2pjd_A Ribosomal RNA small sub 99.3 1.6E-12 5.5E-17 112.5 7.8 110 101-215 186-304 (343)
138 3tfw_A Putative O-methyltransf 99.3 2.1E-12 7.1E-17 106.8 8.1 100 111-218 61-174 (248)
139 3gnl_A Uncharacterized protein 99.3 1.9E-11 6.5E-16 99.7 12.9 131 111-278 19-162 (244)
140 3b3j_A Histone-arginine methyl 99.3 6.2E-12 2.1E-16 113.2 10.8 106 101-212 148-261 (480)
141 4dcm_A Ribosomal RNA large sub 99.3 5.9E-12 2E-16 110.1 9.9 108 102-214 213-334 (375)
142 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.4E-11 4.7E-16 99.4 11.1 98 113-214 38-153 (213)
143 2avn_A Ubiquinone/menaquinone 99.3 7.3E-12 2.5E-16 104.1 8.9 98 112-216 53-154 (260)
144 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.1E-11 3.7E-16 102.7 9.9 126 102-267 87-223 (258)
145 1u2z_A Histone-lysine N-methyl 99.3 1.7E-11 5.8E-16 108.3 11.1 111 102-220 233-365 (433)
146 2bm8_A Cephalosporin hydroxyla 99.3 1.8E-11 6.1E-16 100.3 10.5 95 113-215 81-188 (236)
147 2frn_A Hypothetical protein PH 99.3 3.3E-11 1.1E-15 101.2 12.1 122 111-264 123-253 (278)
148 1jg1_A PIMT;, protein-L-isoasp 99.3 1E-11 3.6E-16 101.6 8.7 101 101-215 81-190 (235)
149 3duw_A OMT, O-methyltransferas 99.3 6.2E-12 2.1E-16 102.0 7.0 100 111-218 56-171 (223)
150 2y1w_A Histone-arginine methyl 99.3 1.3E-11 4.5E-16 107.0 9.2 106 102-213 41-154 (348)
151 3hp7_A Hemolysin, putative; st 99.3 2.6E-11 9E-16 101.6 10.7 139 113-268 85-232 (291)
152 2yxd_A Probable cobalt-precorr 99.3 2.3E-11 8E-16 95.0 9.6 114 111-265 33-154 (183)
153 1o54_A SAM-dependent O-methylt 99.3 1.4E-11 4.7E-16 103.4 8.6 126 102-267 103-238 (277)
154 3ntv_A MW1564 protein; rossman 99.2 1.5E-11 5E-16 100.6 8.4 100 111-218 69-180 (232)
155 2ld4_A Anamorsin; methyltransf 99.2 1.3E-11 4.6E-16 96.3 7.2 110 111-260 10-128 (176)
156 3bzb_A Uncharacterized protein 99.2 1E-10 3.6E-15 98.3 13.2 98 112-213 78-204 (281)
157 3opn_A Putative hemolysin; str 99.2 2.6E-11 8.8E-16 99.1 9.0 134 113-268 37-184 (232)
158 3p9n_A Possible methyltransfer 99.2 9.6E-11 3.3E-15 92.5 11.7 100 112-216 43-155 (189)
159 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1.7E-11 5.9E-16 99.2 7.3 98 113-214 34-150 (218)
160 3q7e_A Protein arginine N-meth 99.2 4.2E-11 1.4E-15 103.8 10.1 97 111-211 64-170 (349)
161 1o9g_A RRNA methyltransferase; 99.2 1.9E-11 6.7E-16 100.9 7.5 100 113-215 51-215 (250)
162 1nv8_A HEMK protein; class I a 99.2 7.5E-11 2.6E-15 99.2 11.2 95 113-212 123-247 (284)
163 3lcv_B Sisomicin-gentamicin re 99.2 4.1E-11 1.4E-15 97.7 9.1 134 112-270 131-273 (281)
164 2ozv_A Hypothetical protein AT 99.2 2.8E-11 9.7E-16 100.6 8.4 100 111-213 34-169 (260)
165 3r3h_A O-methyltransferase, SA 99.2 6.7E-11 2.3E-15 97.3 10.5 100 112-219 59-175 (242)
166 2gpy_A O-methyltransferase; st 99.2 4.9E-11 1.7E-15 97.4 9.6 99 111-217 52-163 (233)
167 3lbf_A Protein-L-isoaspartate 99.2 5.4E-11 1.8E-15 95.5 9.5 99 102-215 68-175 (210)
168 2yxe_A Protein-L-isoaspartate 99.2 5.4E-11 1.8E-15 95.8 9.3 100 102-214 68-177 (215)
169 1p91_A Ribosomal RNA large sub 99.2 5.2E-11 1.8E-15 99.3 9.3 94 112-217 84-181 (269)
170 3u81_A Catechol O-methyltransf 99.2 3E-11 1E-15 97.9 7.7 99 112-216 57-172 (221)
171 3dmg_A Probable ribosomal RNA 99.2 6.5E-11 2.2E-15 103.6 10.3 97 113-214 233-340 (381)
172 3ckk_A TRNA (guanine-N(7)-)-me 99.2 5.8E-11 2E-15 97.2 9.1 99 112-214 45-168 (235)
173 3tr6_A O-methyltransferase; ce 99.2 2.8E-11 9.6E-16 98.2 7.0 99 112-218 63-178 (225)
174 1vbf_A 231AA long hypothetical 99.2 5.9E-11 2E-15 96.7 8.3 99 102-215 61-166 (231)
175 1ej0_A FTSJ; methyltransferase 99.2 1E-10 3.6E-15 90.6 9.4 97 111-215 20-137 (180)
176 2fyt_A Protein arginine N-meth 99.2 1.8E-10 6E-15 99.5 11.6 97 111-211 62-168 (340)
177 2plw_A Ribosomal RNA methyltra 99.2 2.1E-10 7.1E-15 91.3 11.1 95 111-213 20-153 (201)
178 2vdv_E TRNA (guanine-N(7)-)-me 99.2 6E-11 2.1E-15 97.8 7.6 94 112-213 48-172 (246)
179 2b25_A Hypothetical protein; s 99.1 5.2E-11 1.8E-15 102.7 7.2 101 103-215 97-220 (336)
180 1ws6_A Methyltransferase; stru 99.1 2.3E-11 7.8E-16 94.1 4.5 97 113-216 41-149 (171)
181 1g6q_1 HnRNP arginine N-methyl 99.1 2E-10 6.7E-15 98.7 10.7 97 111-211 36-142 (328)
182 3gjy_A Spermidine synthase; AP 99.1 7.5E-11 2.6E-15 100.0 7.6 98 115-215 91-201 (317)
183 3r0q_C Probable protein argini 99.1 9.2E-11 3.1E-15 102.7 8.4 101 111-215 61-170 (376)
184 3adn_A Spermidine synthase; am 99.1 8.9E-11 3.1E-15 99.2 7.9 100 112-214 82-198 (294)
185 2avd_A Catechol-O-methyltransf 99.1 9.5E-11 3.2E-15 95.3 7.5 100 111-218 67-183 (229)
186 1i9g_A Hypothetical protein RV 99.1 2.5E-10 8.6E-15 95.7 10.3 102 102-215 90-204 (280)
187 1dl5_A Protein-L-isoaspartate 99.1 2E-10 6.9E-15 98.2 9.2 101 102-215 66-176 (317)
188 3c3p_A Methyltransferase; NP_9 99.1 6.9E-11 2.4E-15 94.9 5.7 98 112-217 55-163 (210)
189 1sui_A Caffeoyl-COA O-methyltr 99.1 2.3E-10 7.7E-15 94.4 8.8 99 111-217 77-193 (247)
190 2fhp_A Methylase, putative; al 99.1 1.6E-10 5.6E-15 90.7 7.6 97 112-215 43-155 (187)
191 2esr_A Methyltransferase; stru 99.1 5E-11 1.7E-15 93.0 4.5 98 112-216 30-140 (177)
192 1ixk_A Methyltransferase; open 99.1 4.7E-10 1.6E-14 95.8 10.8 102 111-215 116-247 (315)
193 3dr5_A Putative O-methyltransf 99.1 6.7E-11 2.3E-15 95.9 5.0 95 115-217 58-166 (221)
194 2pbf_A Protein-L-isoaspartate 99.1 3.8E-10 1.3E-14 91.6 9.5 94 111-215 78-194 (227)
195 2hnk_A SAM-dependent O-methylt 99.1 1.4E-10 4.7E-15 95.1 6.8 100 111-218 58-185 (239)
196 3frh_A 16S rRNA methylase; met 99.1 1.1E-09 3.8E-14 88.4 11.5 96 112-214 104-206 (253)
197 3dou_A Ribosomal RNA large sub 99.1 2.7E-10 9.1E-15 90.2 7.7 102 102-214 15-139 (191)
198 2ift_A Putative methylase HI07 99.1 7.6E-11 2.6E-15 94.1 4.6 97 113-216 53-165 (201)
199 1r18_A Protein-L-isoaspartate( 99.1 2E-10 6.7E-15 93.4 6.4 93 111-214 82-194 (227)
200 3a27_A TYW2, uncharacterized p 99.1 5.1E-10 1.7E-14 93.6 9.1 100 111-219 117-224 (272)
201 3c3y_A Pfomt, O-methyltransfer 99.1 4.9E-10 1.7E-14 91.8 8.7 99 111-217 68-184 (237)
202 4hc4_A Protein arginine N-meth 99.0 9.3E-10 3.2E-14 95.6 10.4 95 113-211 83-186 (376)
203 2yvl_A TRMI protein, hypotheti 99.0 1.7E-09 5.7E-14 88.8 11.5 93 111-215 89-191 (248)
204 3gdh_A Trimethylguanosine synt 99.0 2.8E-11 9.5E-16 99.3 0.7 137 112-271 77-222 (241)
205 3sso_A Methyltransferase; macr 99.0 2.2E-10 7.5E-15 99.4 6.1 95 112-216 215-326 (419)
206 3cbg_A O-methyltransferase; cy 99.0 2E-10 6.7E-15 93.8 5.3 99 112-218 71-186 (232)
207 1i1n_A Protein-L-isoaspartate 99.0 7.5E-10 2.6E-14 89.8 8.6 93 111-214 75-182 (226)
208 2nyu_A Putative ribosomal RNA 99.0 5.9E-10 2E-14 88.2 7.8 97 111-215 20-146 (196)
209 2i7c_A Spermidine synthase; tr 99.0 2.6E-10 9E-15 95.9 5.9 99 112-213 77-191 (283)
210 3tma_A Methyltransferase; thum 99.0 1.5E-09 5.2E-14 94.2 10.8 109 101-214 193-317 (354)
211 2b2c_A Spermidine synthase; be 99.0 2.5E-10 8.6E-15 97.3 5.2 100 112-214 107-222 (314)
212 1xj5_A Spermidine synthase 1; 99.0 3E-10 1E-14 97.6 5.7 99 112-213 119-234 (334)
213 1uir_A Polyamine aminopropyltr 99.0 3.5E-10 1.2E-14 96.5 6.1 100 112-214 76-195 (314)
214 2p41_A Type II methyltransfera 99.0 7.8E-10 2.7E-14 93.9 7.9 96 111-212 80-189 (305)
215 1mjf_A Spermidine synthase; sp 99.0 3.6E-10 1.2E-14 95.0 5.8 98 112-213 74-192 (281)
216 1iy9_A Spermidine synthase; ro 99.0 3.3E-10 1.1E-14 94.9 5.5 99 112-213 74-188 (275)
217 2fpo_A Methylase YHHF; structu 99.0 6E-10 2.1E-14 88.9 6.7 97 113-216 54-162 (202)
218 2pt6_A Spermidine synthase; tr 99.0 3E-10 1E-14 97.2 5.1 98 112-213 115-229 (321)
219 2o07_A Spermidine synthase; st 99.0 3.2E-10 1.1E-14 96.2 5.2 100 112-214 94-209 (304)
220 1ne2_A Hypothetical protein TA 99.0 9.7E-10 3.3E-14 87.4 7.6 89 112-201 50-139 (200)
221 1zq9_A Probable dimethyladenos 99.0 4.5E-10 1.5E-14 94.6 5.7 102 101-210 18-143 (285)
222 2oxt_A Nucleoside-2'-O-methylt 99.0 7.5E-10 2.6E-14 92.1 6.9 97 111-214 72-185 (265)
223 2wa2_A Non-structural protein 99.0 6.4E-10 2.2E-14 93.0 6.0 97 111-214 80-193 (276)
224 1wy7_A Hypothetical protein PH 99.0 4.6E-09 1.6E-13 83.8 10.8 90 112-202 48-142 (207)
225 4azs_A Methyltransferase WBDD; 99.0 3.8E-10 1.3E-14 103.9 5.0 103 111-218 64-177 (569)
226 2yxl_A PH0851 protein, 450AA l 98.9 6.7E-09 2.3E-13 93.0 12.5 104 111-217 257-392 (450)
227 2cmg_A Spermidine synthase; tr 98.9 2E-09 6.7E-14 89.4 7.8 90 112-213 71-170 (262)
228 1inl_A Spermidine synthase; be 98.9 1.4E-09 4.9E-14 92.0 6.6 98 113-213 90-204 (296)
229 3k6r_A Putative transferase PH 98.9 6.2E-09 2.1E-13 86.8 9.6 121 111-263 123-252 (278)
230 2igt_A SAM dependent methyltra 98.9 1.1E-08 3.8E-13 87.8 11.4 98 113-215 153-273 (332)
231 2h1r_A Dimethyladenosine trans 98.9 2.3E-09 7.7E-14 90.9 6.5 89 101-194 32-127 (299)
232 3tm4_A TRNA (guanine N2-)-meth 98.9 6.3E-09 2.2E-13 90.9 9.0 122 111-268 215-352 (373)
233 3ajd_A Putative methyltransfer 98.8 5.3E-09 1.8E-13 87.5 7.3 104 111-217 81-214 (274)
234 2ih2_A Modification methylase 98.8 1.7E-08 5.9E-13 89.4 9.5 96 113-215 39-165 (421)
235 2xyq_A Putative 2'-O-methyl tr 98.8 1.1E-08 3.8E-13 85.8 7.8 116 111-266 61-195 (290)
236 3m6w_A RRNA methylase; rRNA me 98.8 1.9E-08 6.4E-13 89.8 8.7 102 111-216 99-231 (464)
237 1sqg_A SUN protein, FMU protei 98.8 2.2E-08 7.4E-13 89.1 9.1 104 111-217 244-377 (429)
238 1qam_A ERMC' methyltransferase 98.8 1.9E-08 6.5E-13 82.6 7.9 83 101-187 20-108 (244)
239 2f8l_A Hypothetical protein LM 98.7 1E-08 3.5E-13 88.6 6.0 99 113-214 130-256 (344)
240 3m4x_A NOL1/NOP2/SUN family pr 98.7 2.8E-08 9.6E-13 88.5 7.3 103 111-216 103-236 (456)
241 1yub_A Ermam, rRNA methyltrans 98.7 8.1E-09 2.8E-13 84.9 3.0 105 101-214 19-145 (245)
242 2frx_A Hypothetical protein YE 98.7 1.9E-07 6.4E-12 84.0 11.7 102 113-217 117-249 (479)
243 3b5i_A S-adenosyl-L-methionine 98.6 3.9E-07 1.3E-11 79.0 13.1 150 114-267 53-297 (374)
244 3c0k_A UPF0064 protein YCCW; P 98.6 3.1E-08 1E-12 87.2 6.1 99 112-214 219-339 (396)
245 3gru_A Dimethyladenosine trans 98.6 7.3E-08 2.5E-12 81.1 8.0 89 101-194 40-135 (295)
246 1wxx_A TT1595, hypothetical pr 98.6 2.4E-08 8.2E-13 87.5 5.1 98 113-215 209-326 (382)
247 2yx1_A Hypothetical protein MJ 98.6 6.1E-08 2.1E-12 83.4 7.4 93 112-216 194-293 (336)
248 2b78_A Hypothetical protein SM 98.6 3E-08 1E-12 86.9 5.5 99 112-214 211-331 (385)
249 2as0_A Hypothetical protein PH 98.6 5.3E-08 1.8E-12 85.7 6.6 99 113-215 217-336 (396)
250 4dmg_A Putative uncharacterize 98.6 1.4E-07 4.9E-12 82.6 8.3 99 112-215 213-327 (393)
251 3k0b_A Predicted N6-adenine-sp 98.6 1.6E-07 5.3E-12 82.4 8.4 112 101-215 191-351 (393)
252 3ldg_A Putative uncharacterize 98.6 4.6E-07 1.6E-11 79.2 11.2 112 101-215 184-344 (384)
253 1uwv_A 23S rRNA (uracil-5-)-me 98.5 8.3E-07 2.9E-11 78.9 12.7 91 111-212 284-387 (433)
254 2qfm_A Spermine synthase; sper 98.5 1.1E-07 3.7E-12 81.6 5.9 98 112-213 187-313 (364)
255 3ftd_A Dimethyladenosine trans 98.5 3.3E-07 1.1E-11 75.3 8.3 91 101-194 21-116 (249)
256 1m6y_A S-adenosyl-methyltransf 98.5 1.7E-07 5.8E-12 79.1 6.5 77 101-179 16-105 (301)
257 2efj_A 3,7-dimethylxanthine me 98.5 9.3E-07 3.2E-11 76.7 11.2 150 114-266 53-290 (384)
258 3ldu_A Putative methylase; str 98.5 4.1E-07 1.4E-11 79.6 8.5 112 101-215 185-345 (385)
259 3fut_A Dimethyladenosine trans 98.5 5.7E-07 1.9E-11 74.8 8.7 90 101-196 37-133 (271)
260 2k4m_A TR8_protein, UPF0146 pr 98.4 9.5E-07 3.3E-11 65.3 8.7 83 111-214 33-121 (153)
261 4gqb_A Protein arginine N-meth 98.4 2.9E-07 1E-11 84.7 6.7 127 74-210 323-463 (637)
262 2okc_A Type I restriction enzy 98.4 2.6E-07 8.9E-12 82.5 6.2 101 112-215 170-308 (445)
263 3uzu_A Ribosomal RNA small sub 98.4 1.5E-07 5E-12 78.7 3.7 68 102-171 33-105 (279)
264 2jjq_A Uncharacterized RNA met 98.4 1.2E-06 4.3E-11 77.5 9.6 92 111-213 288-386 (425)
265 3tqs_A Ribosomal RNA small sub 98.4 5E-07 1.7E-11 74.5 6.1 66 101-170 19-89 (255)
266 1rjd_A PPM1P, carboxy methyl t 98.4 4.7E-06 1.6E-10 71.3 12.3 144 112-261 96-281 (334)
267 3o4f_A Spermidine synthase; am 98.4 8.1E-07 2.8E-11 74.2 7.2 99 112-214 82-198 (294)
268 1m6e_X S-adenosyl-L-methionnin 98.3 5.8E-06 2E-10 71.2 12.5 150 113-265 51-277 (359)
269 3v97_A Ribosomal RNA large sub 98.3 1.4E-06 4.9E-11 81.9 8.5 99 112-214 538-657 (703)
270 3evf_A RNA-directed RNA polyme 98.3 2.5E-06 8.6E-11 70.0 8.0 99 111-212 72-182 (277)
271 1qyr_A KSGA, high level kasuga 98.2 1.2E-06 4.1E-11 72.1 5.9 90 101-194 11-111 (252)
272 3ua3_A Protein arginine N-meth 98.2 1.9E-06 6.5E-11 79.5 7.6 127 74-211 378-531 (745)
273 2r6z_A UPF0341 protein in RSP 98.2 3E-06 1E-10 69.9 7.3 99 111-216 81-218 (258)
274 2qy6_A UPF0209 protein YFCK; s 98.2 1.9E-06 6.5E-11 71.1 5.6 128 113-275 60-242 (257)
275 2b9e_A NOL1/NOP2/SUN domain fa 98.1 1.6E-05 5.5E-10 67.3 10.2 68 111-178 100-180 (309)
276 3v97_A Ribosomal RNA large sub 98.1 5.4E-06 1.8E-10 78.0 7.9 113 101-215 180-348 (703)
277 3gcz_A Polyprotein; flavivirus 98.1 2.8E-06 9.6E-11 69.8 4.8 107 101-212 80-199 (282)
278 2dul_A N(2),N(2)-dimethylguano 98.0 2.7E-06 9.2E-11 74.1 4.0 93 113-214 47-164 (378)
279 3bt7_A TRNA (uracil-5-)-methyl 98.0 2.2E-06 7.4E-11 74.6 3.0 88 114-214 214-326 (369)
280 3iei_A Leucine carboxyl methyl 97.9 0.00039 1.3E-08 59.3 15.8 147 113-268 90-281 (334)
281 4auk_A Ribosomal RNA large sub 97.9 8.6E-05 2.9E-09 63.8 10.9 95 111-214 209-306 (375)
282 3axs_A Probable N(2),N(2)-dime 97.9 5.3E-06 1.8E-10 72.4 3.2 94 112-214 51-158 (392)
283 2ar0_A M.ecoki, type I restric 97.9 1.7E-05 5.7E-10 72.4 6.4 100 112-214 168-312 (541)
284 3eld_A Methyltransferase; flav 97.7 6.5E-05 2.2E-09 62.2 7.3 100 110-212 78-189 (300)
285 3s1s_A Restriction endonucleas 97.7 0.0002 6.9E-09 67.3 10.8 99 113-214 321-465 (878)
286 3cvo_A Methyltransferase-like 97.7 0.00033 1.1E-08 55.2 9.8 92 112-217 29-156 (202)
287 3c6k_A Spermine synthase; sper 97.6 5.6E-05 1.9E-09 65.1 5.5 97 113-213 205-330 (381)
288 3ll7_A Putative methyltransfer 97.6 7.8E-05 2.7E-09 65.3 6.3 65 112-178 92-169 (410)
289 1wg8_A Predicted S-adenosylmet 97.6 0.00016 5.5E-09 59.7 7.4 76 99-178 10-95 (285)
290 2oyr_A UPF0341 protein YHIQ; a 97.5 7.8E-05 2.7E-09 61.3 4.6 72 111-184 84-176 (258)
291 3khk_A Type I restriction-modi 97.5 0.00011 3.7E-09 67.1 5.3 98 114-214 245-395 (544)
292 2px2_A Genome polyprotein [con 97.4 0.00041 1.4E-08 56.2 6.8 107 101-212 63-181 (269)
293 2vz8_A Fatty acid synthase; tr 97.3 5.7E-05 1.9E-09 80.1 2.1 143 113-267 1240-1394(2512)
294 3p8z_A Mtase, non-structural p 97.3 0.0011 3.6E-08 53.0 8.2 106 101-212 68-184 (267)
295 3lkd_A Type I restriction-modi 97.1 0.0016 5.5E-08 59.3 8.7 100 113-214 221-358 (542)
296 2uyo_A Hypothetical protein ML 97.1 0.0066 2.2E-07 51.2 11.8 144 112-263 101-274 (310)
297 3tka_A Ribosomal RNA small sub 97.0 0.0022 7.5E-08 54.2 7.7 68 99-168 45-115 (347)
298 3lkz_A Non-structural protein 97.0 0.0028 9.7E-08 52.3 8.0 106 101-212 84-202 (321)
299 2wk1_A NOVP; transferase, O-me 96.8 0.0022 7.7E-08 53.2 6.6 94 112-212 105-242 (282)
300 2zwa_A Leucine carboxyl methyl 96.6 0.055 1.9E-06 50.8 14.9 149 113-268 107-309 (695)
301 1i4w_A Mitochondrial replicati 96.3 0.009 3.1E-07 51.2 7.1 55 114-168 59-116 (353)
302 4fzv_A Putative methyltransfer 96.1 0.02 6.7E-07 49.2 8.4 106 111-219 146-289 (359)
303 3r24_A NSP16, 2'-O-methyl tran 96.1 0.012 4.1E-07 48.6 6.5 91 111-212 107-215 (344)
304 2zig_A TTHA0409, putative modi 95.9 0.012 4.2E-07 49.2 5.9 41 112-154 234-275 (297)
305 3vyw_A MNMC2; tRNA wobble urid 95.8 0.026 8.9E-07 47.2 7.6 130 113-277 96-257 (308)
306 3ufb_A Type I restriction-modi 94.5 0.21 7.3E-06 45.2 10.1 103 112-214 216-362 (530)
307 1g55_A DNA cytosine methyltran 93.7 0.22 7.5E-06 42.4 8.0 125 115-264 3-145 (343)
308 1g60_A Adenine-specific methyl 92.7 0.2 7E-06 40.8 6.0 41 112-154 211-252 (260)
309 3tos_A CALS11; methyltransfera 90.9 0.2 6.8E-06 40.8 3.9 94 114-214 70-217 (257)
310 2py6_A Methyltransferase FKBM; 90.7 0.34 1.2E-05 42.3 5.5 56 112-167 225-292 (409)
311 3ggo_A Prephenate dehydrogenas 89.9 2 6.8E-05 35.9 9.5 83 114-202 33-119 (314)
312 1zkd_A DUF185; NESG, RPR58, st 87.3 1.7 5.8E-05 37.6 7.4 40 113-152 80-126 (387)
313 1pl8_A Human sorbitol dehydrog 86.8 2.2 7.5E-05 36.2 7.9 94 111-215 169-274 (356)
314 3qv2_A 5-cytosine DNA methyltr 86.6 2.1 7.1E-05 36.1 7.4 128 113-265 9-157 (327)
315 3b1f_A Putative prephenate deh 86.2 5.2 0.00018 32.6 9.7 82 115-202 7-92 (290)
316 3g7u_A Cytosine-specific methy 85.9 3.5 0.00012 35.4 8.7 97 115-218 3-122 (376)
317 2oo3_A Protein involved in cat 85.4 2.9 0.0001 34.3 7.5 100 114-218 92-202 (283)
318 3iht_A S-adenosyl-L-methionine 84.6 4.5 0.00015 30.0 7.3 33 113-145 40-72 (174)
319 3ew7_A LMO0794 protein; Q8Y8U8 84.1 3.8 0.00013 31.5 7.6 95 116-215 2-103 (221)
320 3h2s_A Putative NADH-flavin re 83.8 7.2 0.00025 30.0 9.1 95 116-215 2-105 (224)
321 3two_A Mannitol dehydrogenase; 83.7 2.1 7.1E-05 36.2 6.3 90 111-215 174-266 (348)
322 4dvj_A Putative zinc-dependent 83.5 1.5 5.2E-05 37.4 5.3 91 113-214 171-270 (363)
323 1f8f_A Benzyl alcohol dehydrog 83.4 2.5 8.7E-05 36.0 6.7 95 111-216 188-291 (371)
324 3s2e_A Zinc-containing alcohol 83.1 2.5 8.7E-05 35.5 6.5 93 111-215 164-264 (340)
325 2dph_A Formaldehyde dismutase; 82.8 1.8 6.2E-05 37.4 5.6 101 111-216 183-301 (398)
326 3pvc_A TRNA 5-methylaminomethy 82.3 1.3 4.4E-05 41.4 4.7 33 113-145 58-102 (689)
327 1lss_A TRK system potassium up 82.1 11 0.00037 26.4 9.1 80 115-202 5-94 (140)
328 1pqw_A Polyketide synthase; ro 82.0 3.2 0.00011 31.7 6.2 90 111-216 36-139 (198)
329 3ius_A Uncharacterized conserv 82.0 18 0.00062 28.9 13.7 94 115-215 6-103 (286)
330 1cdo_A Alcohol dehydrogenase; 81.7 7 0.00024 33.2 8.9 94 111-215 190-295 (374)
331 2g5c_A Prephenate dehydrogenas 81.6 7.9 0.00027 31.3 8.9 86 116-210 3-92 (281)
332 3r6d_A NAD-dependent epimerase 81.4 15 0.0005 28.3 10.1 136 116-267 7-154 (221)
333 3llv_A Exopolyphosphatase-rela 81.2 8 0.00027 27.5 7.9 62 114-179 6-77 (141)
334 1e3j_A NADP(H)-dependent ketos 81.1 13 0.00044 31.2 10.3 93 111-215 166-272 (352)
335 3jv7_A ADH-A; dehydrogenase, n 80.6 2.6 9E-05 35.5 5.7 94 111-215 169-271 (345)
336 2g1u_A Hypothetical protein TM 80.5 14 0.00048 26.7 11.3 84 112-202 17-109 (155)
337 4eez_A Alcohol dehydrogenase 1 79.9 12 0.0004 31.3 9.6 93 111-214 161-263 (348)
338 1p0f_A NADP-dependent alcohol 79.9 6.7 0.00023 33.3 8.1 94 111-215 189-294 (373)
339 3ps9_A TRNA 5-methylaminomethy 79.8 2.3 7.8E-05 39.6 5.4 32 114-145 67-110 (676)
340 4h0n_A DNMT2; SAH binding, tra 79.8 2.6 9E-05 35.6 5.3 127 115-265 4-146 (333)
341 1e3i_A Alcohol dehydrogenase, 79.6 9 0.00031 32.5 8.9 94 111-215 193-298 (376)
342 3l9w_A Glutathione-regulated p 79.5 6.8 0.00023 34.1 8.0 88 114-213 4-101 (413)
343 4ej6_A Putative zinc-binding d 79.3 5 0.00017 34.2 7.1 95 111-216 180-286 (370)
344 2jhf_A Alcohol dehydrogenase E 79.2 9.5 0.00033 32.4 8.9 94 111-215 189-294 (374)
345 2aef_A Calcium-gated potassium 79.1 20 0.00069 27.9 10.3 86 113-212 8-103 (234)
346 1kol_A Formaldehyde dehydrogen 77.9 7.9 0.00027 33.2 8.0 98 111-216 183-302 (398)
347 1jvb_A NAD(H)-dependent alcoho 77.8 2.2 7.4E-05 36.1 4.3 94 111-215 168-272 (347)
348 3uko_A Alcohol dehydrogenase c 77.8 7.8 0.00027 33.0 7.9 95 111-216 191-297 (378)
349 3fwz_A Inner membrane protein 77.6 14 0.00046 26.4 8.1 88 114-212 7-103 (140)
350 3m6i_A L-arabinitol 4-dehydrog 77.2 11 0.00038 31.7 8.7 94 111-215 177-284 (363)
351 1uuf_A YAHK, zinc-type alcohol 76.9 3.6 0.00012 35.1 5.5 93 111-215 192-289 (369)
352 4f3n_A Uncharacterized ACR, CO 76.8 2.2 7.5E-05 37.4 4.1 35 114-148 138-177 (432)
353 2c0c_A Zinc binding alcohol de 76.4 6.5 0.00022 33.3 6.9 93 111-216 161-263 (362)
354 3mag_A VP39; methylated adenin 76.3 3 0.0001 34.3 4.5 33 113-145 60-96 (307)
355 2fzw_A Alcohol dehydrogenase c 76.2 7.7 0.00026 32.9 7.4 94 111-215 188-293 (373)
356 2h6e_A ADH-4, D-arabinose 1-de 76.2 1.8 6.2E-05 36.5 3.4 92 113-215 170-270 (344)
357 3l4b_C TRKA K+ channel protien 75.2 12 0.00039 29.0 7.7 86 116-212 2-97 (218)
358 1boo_A Protein (N-4 cytosine-s 72.8 6.5 0.00022 32.9 5.9 41 112-154 251-292 (323)
359 1id1_A Putative potassium chan 72.5 23 0.00077 25.5 8.3 89 114-212 3-103 (153)
360 1rjw_A ADH-HT, alcohol dehydro 72.2 16 0.00055 30.5 8.3 90 111-215 162-262 (339)
361 3fpc_A NADP-dependent alcohol 71.8 6.3 0.00022 33.2 5.7 95 111-216 164-268 (352)
362 1v3u_A Leukotriene B4 12- hydr 71.7 5.7 0.00019 33.1 5.4 93 111-216 143-246 (333)
363 3ip1_A Alcohol dehydrogenase, 71.5 30 0.001 29.7 10.0 98 111-216 211-320 (404)
364 2hcy_A Alcohol dehydrogenase 1 70.5 8.3 0.00028 32.4 6.1 90 111-215 167-270 (347)
365 4a2c_A Galactitol-1-phosphate 70.5 32 0.0011 28.6 9.8 95 111-216 158-262 (346)
366 3sxp_A ADP-L-glycero-D-mannohe 68.8 7.9 0.00027 32.5 5.7 67 114-181 10-99 (362)
367 3tqh_A Quinone oxidoreductase; 66.7 5.8 0.0002 32.9 4.3 90 111-213 150-244 (321)
368 2c7p_A Modification methylase 66.3 6.4 0.00022 33.0 4.5 122 114-264 11-149 (327)
369 3dfz_A SIRC, precorrin-2 dehyd 64.6 13 0.00045 29.3 5.7 65 113-179 30-98 (223)
370 1iz0_A Quinone oxidoreductase; 64.3 3.8 0.00013 33.7 2.7 91 111-215 123-219 (302)
371 3c85_A Putative glutathione-re 64.2 41 0.0014 24.9 9.4 87 114-212 39-137 (183)
372 3c24_A Putative oxidoreductase 63.2 31 0.0011 27.8 8.1 77 115-202 12-92 (286)
373 3qwb_A Probable quinone oxidor 62.6 16 0.00055 30.3 6.4 92 111-215 146-248 (334)
374 3b73_A PHIH1 repressor-like pr 62.4 2.1 7.3E-05 29.8 0.7 28 1-28 50-78 (111)
375 2j3h_A NADP-dependent oxidored 62.4 23 0.0008 29.4 7.4 93 111-216 153-257 (345)
376 4hv4_A UDP-N-acetylmuramate--L 61.9 49 0.0017 29.3 9.7 124 113-261 21-150 (494)
377 3vrd_B FCCB subunit, flavocyto 61.9 8 0.00027 33.0 4.4 32 114-145 2-35 (401)
378 1eg2_A Modification methylase 61.9 16 0.00055 30.4 6.1 41 112-154 241-285 (319)
379 2f1k_A Prephenate dehydrogenas 61.7 42 0.0014 26.8 8.6 78 116-202 2-82 (279)
380 2b5w_A Glucose dehydrogenase; 61.7 18 0.0006 30.4 6.5 86 115-216 174-275 (357)
381 2dq4_A L-threonine 3-dehydroge 61.6 28 0.00097 28.9 7.8 87 113-215 164-263 (343)
382 2d8a_A PH0655, probable L-thre 61.2 19 0.00065 30.1 6.6 90 113-215 167-268 (348)
383 3uog_A Alcohol dehydrogenase; 61.1 25 0.00087 29.5 7.4 92 111-216 187-289 (363)
384 1vj0_A Alcohol dehydrogenase, 61.0 14 0.00048 31.4 5.8 94 111-216 193-300 (380)
385 3gms_A Putative NADPH:quinone 60.8 16 0.00053 30.5 6.0 93 111-216 142-245 (340)
386 4b7c_A Probable oxidoreductase 60.6 13 0.00044 31.0 5.4 94 111-217 147-251 (336)
387 2ew2_A 2-dehydropantoate 2-red 58.7 37 0.0013 27.5 7.9 86 115-212 4-106 (316)
388 3e48_A Putative nucleoside-dip 57.6 37 0.0013 27.1 7.6 95 117-216 3-107 (289)
389 3jyn_A Quinone oxidoreductase; 57.5 13 0.00043 30.9 4.8 93 111-216 138-241 (325)
390 3goh_A Alcohol dehydrogenase, 57.1 5.9 0.0002 32.8 2.6 88 111-214 140-229 (315)
391 3ulk_A Ketol-acid reductoisome 55.3 8.4 0.00029 33.9 3.3 90 113-214 36-132 (491)
392 1yb5_A Quinone oxidoreductase; 54.8 33 0.0011 28.7 7.0 91 111-214 168-269 (351)
393 1vpt_A VP39; RNA CAP, poly(A) 53.7 15 0.0005 30.7 4.3 50 114-164 76-129 (348)
394 4dcm_A Ribosomal RNA large sub 52.6 73 0.0025 27.0 8.9 92 113-215 38-137 (375)
395 2o3j_A UDP-glucose 6-dehydroge 52.3 46 0.0016 29.4 7.8 95 115-214 10-134 (481)
396 2vn8_A Reticulon-4-interacting 52.1 19 0.00064 30.5 5.0 93 111-214 181-280 (375)
397 3dqp_A Oxidoreductase YLBE; al 51.9 75 0.0026 24.0 10.9 91 116-216 2-107 (219)
398 2j8z_A Quinone oxidoreductase; 50.6 26 0.00089 29.4 5.7 92 111-215 160-262 (354)
399 2jl1_A Triphenylmethane reduct 50.6 91 0.0031 24.6 9.4 93 120-216 5-108 (287)
400 3krt_A Crotonyl COA reductase; 50.4 29 0.00098 30.3 6.1 92 111-215 226-345 (456)
401 1xa0_A Putative NADPH dependen 49.7 15 0.00052 30.4 4.0 91 112-215 147-247 (328)
402 1lnq_A MTHK channels, potassiu 49.6 58 0.002 26.9 7.7 85 114-212 115-209 (336)
403 3oig_A Enoyl-[acyl-carrier-pro 49.5 93 0.0032 24.4 10.6 100 114-218 7-151 (266)
404 3qvo_A NMRA family protein; st 49.4 87 0.003 24.1 9.8 93 115-216 24-126 (236)
405 2x0j_A Malate dehydrogenase; o 48.9 49 0.0017 27.1 6.9 99 116-214 2-118 (294)
406 3hn7_A UDP-N-acetylmuramate-L- 48.2 1.2E+02 0.0039 27.1 9.8 125 114-262 19-151 (524)
407 3gg2_A Sugar dehydrogenase, UD 47.9 55 0.0019 28.6 7.5 93 116-215 4-122 (450)
408 3ic5_A Putative saccharopine d 47.7 58 0.002 21.5 8.8 63 114-180 5-77 (118)
409 2i6t_A Ubiquitin-conjugating e 47.1 1.1E+02 0.0037 25.1 8.8 66 113-180 13-85 (303)
410 2y0c_A BCEC, UDP-glucose dehyd 46.9 56 0.0019 28.8 7.4 96 113-215 7-128 (478)
411 3nx4_A Putative oxidoreductase 46.0 37 0.0013 27.8 5.9 87 116-215 149-242 (324)
412 3g79_A NDP-N-acetyl-D-galactos 46.0 1.6E+02 0.0054 26.0 10.5 100 112-218 16-150 (478)
413 4ezb_A Uncharacterized conserv 44.1 1.2E+02 0.0041 24.8 8.7 76 115-202 25-112 (317)
414 3e8x_A Putative NAD-dependent 43.9 1.1E+02 0.0036 23.4 12.6 133 114-267 21-170 (236)
415 4id9_A Short-chain dehydrogena 43.2 74 0.0025 26.0 7.4 66 114-187 19-92 (347)
416 2hmt_A YUAA protein; RCK, KTN, 42.8 79 0.0027 21.7 9.0 61 115-179 7-77 (144)
417 4e2x_A TCAB9; kijanose, tetron 42.8 1.1E+02 0.0039 25.9 8.7 90 112-212 317-408 (416)
418 3fbg_A Putative arginate lyase 42.8 19 0.00065 30.1 3.6 89 113-213 150-247 (346)
419 2zig_A TTHA0409, putative modi 42.4 16 0.00053 30.0 2.9 20 191-213 77-96 (297)
420 2qrv_A DNA (cytosine-5)-methyl 42.0 46 0.0016 27.3 5.7 69 112-180 14-91 (295)
421 1s6y_A 6-phospho-beta-glucosid 42.0 18 0.00063 31.7 3.4 65 115-180 8-91 (450)
422 3d1l_A Putative NADP oxidoredu 41.8 85 0.0029 24.7 7.3 79 115-202 11-93 (266)
423 4a0s_A Octenoyl-COA reductase/ 41.6 64 0.0022 27.9 6.9 92 111-215 218-337 (447)
424 3o26_A Salutaridine reductase; 41.2 1.2E+02 0.004 24.3 8.2 55 114-169 12-74 (311)
425 1y6j_A L-lactate dehydrogenase 41.2 54 0.0019 27.1 6.1 66 114-180 7-82 (318)
426 3hyw_A Sulfide-quinone reducta 40.5 26 0.00089 30.3 4.2 31 115-145 3-35 (430)
427 3dmg_A Probable ribosomal RNA 40.2 25 0.00085 30.1 3.9 87 114-214 46-139 (381)
428 3slg_A PBGP3 protein; structur 40.0 38 0.0013 28.2 5.1 64 114-179 24-98 (372)
429 3k96_A Glycerol-3-phosphate de 39.4 57 0.0019 27.5 6.0 87 114-211 29-130 (356)
430 2zb4_A Prostaglandin reductase 39.4 87 0.003 26.0 7.3 90 111-216 156-262 (357)
431 3c7a_A Octopine dehydrogenase; 39.2 81 0.0028 26.8 7.1 33 172-213 82-114 (404)
432 3me5_A Cytosine-specific methy 38.5 16 0.00054 32.5 2.5 123 114-263 88-255 (482)
433 1r7j_A Conserved hypothetical 38.4 6.6 0.00023 26.3 0.0 25 2-27 42-66 (95)
434 2cf5_A Atccad5, CAD, cinnamyl 38.0 31 0.0011 28.9 4.2 90 113-215 180-276 (357)
435 4h7p_A Malate dehydrogenase; s 37.9 84 0.0029 26.4 6.8 102 113-214 23-150 (345)
436 3d0o_A L-LDH 1, L-lactate dehy 37.9 89 0.003 25.7 6.9 100 114-214 6-123 (317)
437 4g65_A TRK system potassium up 37.8 34 0.0012 30.1 4.5 61 115-178 4-74 (461)
438 1hdo_A Biliverdin IX beta redu 37.8 1.2E+02 0.0041 22.3 10.6 63 115-180 4-75 (206)
439 3tri_A Pyrroline-5-carboxylate 37.7 62 0.0021 26.1 5.8 81 115-202 4-89 (280)
440 3g0o_A 3-hydroxyisobutyrate de 37.1 1.1E+02 0.0038 24.7 7.4 79 115-202 8-93 (303)
441 1u8x_X Maltose-6'-phosphate gl 37.0 20 0.0007 31.7 2.9 66 115-180 29-110 (472)
442 1np3_A Ketol-acid reductoisome 36.9 42 0.0014 28.0 4.8 83 115-211 17-104 (338)
443 3gpi_A NAD-dependent epimerase 36.8 1.5E+02 0.0053 23.3 8.2 93 115-215 4-109 (286)
444 2bll_A Protein YFBG; decarboxy 36.3 61 0.0021 26.5 5.7 62 116-179 2-74 (345)
445 4g65_A TRK system potassium up 35.9 59 0.002 28.5 5.8 92 103-202 224-325 (461)
446 3abi_A Putative uncharacterize 35.9 1.8E+02 0.006 24.3 8.7 78 113-200 15-100 (365)
447 4aj2_A L-lactate dehydrogenase 35.9 1.1E+02 0.0036 25.6 7.1 102 112-214 17-136 (331)
448 1tt7_A YHFP; alcohol dehydroge 35.3 18 0.00061 29.9 2.2 87 116-215 153-248 (330)
449 1bg6_A N-(1-D-carboxylethyl)-L 35.0 91 0.0031 25.7 6.7 80 115-202 5-100 (359)
450 3vku_A L-LDH, L-lactate dehydr 34.8 82 0.0028 26.2 6.2 101 113-214 8-125 (326)
451 4e5v_A Putative THUA-like prot 34.3 1E+02 0.0036 24.9 6.6 40 170-216 56-95 (281)
452 1oju_A MDH, malate dehydrogena 33.9 1.1E+02 0.0037 25.0 6.7 98 116-214 2-118 (294)
453 1t2d_A LDH-P, L-lactate dehydr 33.7 1.3E+02 0.0045 24.8 7.3 66 114-180 4-80 (322)
454 3gvi_A Malate dehydrogenase; N 33.4 63 0.0022 26.9 5.3 100 114-214 7-124 (324)
455 1pjq_A CYSG, siroheme synthase 33.2 86 0.0029 27.4 6.4 65 114-179 12-79 (457)
456 1y0u_A Arsenical resistance op 33.2 11 0.00037 25.0 0.4 25 1-26 64-88 (96)
457 1ez4_A Lactate dehydrogenase; 33.0 1.1E+02 0.0038 25.2 6.8 99 114-213 5-120 (318)
458 4e21_A 6-phosphogluconate dehy 32.6 63 0.0021 27.3 5.2 79 114-202 22-106 (358)
459 3ubt_Y Modification methylase 32.5 42 0.0014 27.7 4.1 119 116-263 2-138 (331)
460 3ged_A Short-chain dehydrogena 32.5 1.8E+02 0.0063 22.9 10.9 69 115-202 3-74 (247)
461 4gbj_A 6-phosphogluconate dehy 31.7 1.1E+02 0.0037 24.9 6.4 81 116-209 7-92 (297)
462 3hwr_A 2-dehydropantoate 2-red 31.6 1.3E+02 0.0045 24.6 7.0 90 113-213 18-119 (318)
463 2qyt_A 2-dehydropantoate 2-red 31.3 18 0.0006 29.6 1.5 81 115-202 9-108 (317)
464 3kzv_A Uncharacterized oxidore 31.1 1.9E+02 0.0063 22.5 7.8 69 115-202 3-77 (254)
465 3kkj_A Amine oxidase, flavin-c 31.0 32 0.0011 26.3 3.0 30 116-145 4-33 (336)
466 3ghy_A Ketopantoate reductase 31.0 45 0.0015 27.6 4.0 88 115-214 4-104 (335)
467 3pid_A UDP-glucose 6-dehydroge 30.7 1.4E+02 0.0048 25.9 7.2 95 114-215 36-153 (432)
468 4e12_A Diketoreductase; oxidor 30.6 57 0.002 26.2 4.5 89 114-212 4-118 (283)
469 1mv8_A GMD, GDP-mannose 6-dehy 30.6 85 0.0029 27.1 5.9 93 116-214 2-122 (436)
470 2jhp_A VP4 core protein; viral 30.2 59 0.002 29.1 4.5 90 103-218 179-269 (644)
471 2xxj_A L-LDH, L-lactate dehydr 30.2 75 0.0026 26.1 5.2 97 116-213 2-115 (310)
472 2cvz_A Dehydrogenase, 3-hydrox 30.1 1.3E+02 0.0044 23.9 6.6 76 116-202 3-81 (289)
473 1yo6_A Putative carbonyl reduc 29.8 1.3E+02 0.0044 23.0 6.4 53 115-168 4-62 (250)
474 1zsy_A Mitochondrial 2-enoyl t 29.7 1.3E+02 0.0044 25.0 6.8 92 111-215 165-271 (357)
475 3dii_A Short-chain dehydrogena 29.4 2E+02 0.0067 22.2 8.9 52 115-167 3-57 (247)
476 4hb9_A Similarities with proba 29.0 40 0.0014 28.3 3.4 31 115-145 2-32 (412)
477 1y1p_A ARII, aldehyde reductas 28.8 2.3E+02 0.0077 22.8 9.0 67 113-180 10-91 (342)
478 3p7m_A Malate dehydrogenase; p 28.7 89 0.003 25.9 5.4 100 114-214 5-122 (321)
479 2rir_A Dipicolinate synthase, 28.6 1.2E+02 0.0039 24.7 6.1 83 113-209 156-241 (300)
480 2b69_A UDP-glucuronate decarbo 28.5 1.4E+02 0.0048 24.3 6.7 66 114-180 27-99 (343)
481 2izz_A Pyrroline-5-carboxylate 28.1 51 0.0017 27.2 3.8 80 115-202 23-109 (322)
482 1kyq_A Met8P, siroheme biosynt 28.1 99 0.0034 25.0 5.4 33 113-145 12-44 (274)
483 1smk_A Malate dehydrogenase, g 28.0 32 0.0011 28.7 2.5 100 114-213 8-124 (326)
484 4a7p_A UDP-glucose dehydrogena 28.0 1.7E+02 0.0057 25.6 7.2 96 113-215 7-129 (446)
485 2q3e_A UDP-glucose 6-dehydroge 27.8 2E+02 0.0067 25.1 7.8 39 115-153 6-47 (467)
486 1o6z_A MDH, malate dehydrogena 27.8 1.7E+02 0.0059 23.8 7.0 56 157-213 56-118 (303)
487 2zqz_A L-LDH, L-lactate dehydr 27.8 88 0.003 26.0 5.2 101 112-213 7-124 (326)
488 1ur5_A Malate dehydrogenase; o 27.0 98 0.0034 25.3 5.4 98 115-213 3-118 (309)
489 1ldn_A L-lactate dehydrogenase 26.9 1.5E+02 0.005 24.3 6.5 65 114-179 6-81 (316)
490 3fpz_A Thiazole biosynthetic e 26.7 55 0.0019 26.8 3.8 31 115-145 66-98 (326)
491 1ssz_A Pulmonary surfactant-as 26.6 32 0.0011 17.3 1.4 19 190-211 4-22 (34)
492 3pqe_A L-LDH, L-lactate dehydr 26.6 1.7E+02 0.0058 24.2 6.8 101 113-214 4-122 (326)
493 3hn2_A 2-dehydropantoate 2-red 26.6 97 0.0033 25.2 5.3 85 116-213 4-102 (312)
494 4eqs_A Coenzyme A disulfide re 26.3 63 0.0021 27.9 4.2 30 116-145 2-33 (437)
495 2hwk_A Helicase NSP2; rossman 26.3 74 0.0025 26.1 4.2 88 123-214 151-254 (320)
496 1up7_A 6-phospho-beta-glucosid 26.3 65 0.0022 27.9 4.2 66 114-180 2-81 (417)
497 1guz_A Malate dehydrogenase; o 26.1 96 0.0033 25.4 5.2 65 116-181 2-78 (310)
498 3nep_X Malate dehydrogenase; h 25.9 1.1E+02 0.0039 25.1 5.6 97 116-214 2-118 (314)
499 3dhn_A NAD-dependent epimerase 25.8 78 0.0027 24.0 4.4 62 115-180 5-75 (227)
500 1xgk_A Nitrogen metabolite rep 25.6 2.8E+02 0.0096 22.8 10.3 64 115-180 6-81 (352)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=5.1e-49 Score=343.69 Aligned_cols=269 Identities=19% Similarity=0.360 Sum_probs=240.2
Q ss_pred CccccccCceeecCC---CeEecChhcc-hhhcCCCCChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhC---CC
Q 023625 1 MRILVHSGFFAQQKD---DEYFLTPASR-LLLKDTPLKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHG---KK 73 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~---~~y~~t~~s~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g---~~ 73 (279)
||+|+++|+|++..+ +.|+||+.++ +|.+++|.++++++.+.. +..+.+|.+|.+++++|+ ++|...+| .+
T Consensus 64 Lr~L~~~gll~~~~~~~~~~y~~t~~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~ 141 (353)
T 4a6d_A 64 LDICVSLKLLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMG-RTSYRCWGHLADAVREGR-NQYLETFGVPAEE 141 (353)
T ss_dssp HHHHHHTTSEEEEEETTEEEEEECHHHHHHHSTTSTTCCHHHHHHHH-HTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSS
T ss_pred HHHHHHCCCEEEeccCccceeeCCHHHHHHhhcCCchHHHHHHHHhC-HHHHHHHHHHHHHHhcCC-ChhHHhcCCChHH
Confidence 588999999986533 4799999997 888999999999888764 567899999999999998 67877776 36
Q ss_pred hhhhhhcCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhcc
Q 023625 74 VWDRVADEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQ 153 (279)
Q Consensus 74 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~ 153 (279)
+|+++.++|+....|.++|...+....+.+++.++ +.+..+|||||||+|.++.++++++|+++++++|+|++++.++
T Consensus 142 ~~~~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~--~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~ 219 (353)
T 4a6d_A 142 LFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFD--LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAK 219 (353)
T ss_dssp HHHHHTSSHHHHHHHHHHHHTTHHHHHHHHHHSSC--GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHH
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcC--cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHH
Confidence 79999999999999999999988888888999887 7788899999999999999999999999999999999998887
Q ss_pred c-----CCCCeEEeeCCCCC-CCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhh
Q 023625 154 G-----TNDNLDFLGGNMFE-AIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESM 227 (279)
Q Consensus 154 ~-----~~~ri~~~~~d~~~-~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~ 227 (279)
+ ..+||+++.+|+++ +.+++|+|+++++||+|+|+++.++|++++++|+ |||+++|+|.++++....+
T Consensus 220 ~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~---pgg~lli~e~~~~~~~~~~--- 293 (353)
T 4a6d_A 220 QHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCK---PGGGILVIESLLDEDRRGP--- 293 (353)
T ss_dssp HHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCC---TTCEEEEEECCCCTTSCCC---
T ss_pred HhhhhcccCceeeecCccccCCCCCceEEEeeeecccCCHHHHHHHHHHHHhhCC---CCCEEEEEEeeeCCCCCCC---
Confidence 4 35899999999998 5668999999999999999999999999999999 7999999999998765542
Q ss_pred hhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 228 ETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 228 ~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
.....+|+.|++.++|++||.+||++||++|||+.++++++++..++|++||
T Consensus 294 ~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 294 LLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp HHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEEe
Confidence 2345789999999999999999999999999999999999999999999987
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=1.3e-46 Score=329.68 Aligned_cols=273 Identities=28% Similarity=0.501 Sum_probs=241.5
Q ss_pred CccccccCceeecC--------CCeEecChhcchhhcC-CCCChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhC
Q 023625 1 MRILVHSGFFAQQK--------DDEYFLTPASRLLLKD-TPLKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHG 71 (279)
Q Consensus 1 Lr~L~~~g~l~~~~--------~~~y~~t~~s~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g 71 (279)
||+|++.|+|+++. +++|+||+.|++|+++ ++.|+++++.+..++.++..|.+|.+++|+|+ ++|+..+|
T Consensus 82 Lr~L~~~g~l~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g 160 (364)
T 3p9c_A 82 LRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYG 160 (364)
T ss_dssp HHHHHHTTSEEEEEEECSSSCEEEEEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHS
T ss_pred HHHHHhCCCEEEeccccCCCCcCCEEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcC
Confidence 68999999999972 2589999999977765 47789999888777788899999999999988 89999999
Q ss_pred CChhhhhhcCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhh
Q 023625 72 KKVWDRVADEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDN 151 (279)
Q Consensus 72 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 151 (279)
.++|+|+.++|+..+.|+++|...+......+++.++ .+.+..+|||||||+|.++..+++++|+++++++|+|.+++.
T Consensus 161 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 239 (364)
T 3p9c_A 161 MSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYH-GFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISE 239 (364)
T ss_dssp SCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTT
T ss_pred CCHHHHHHhCHHHHHHHHHHHHHhhHHHHHHHHHhcc-cccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHh
Confidence 9999999999999999999999888777777888876 366789999999999999999999999999999999999999
Q ss_pred cccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhh
Q 023625 152 LQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQL 231 (279)
Q Consensus 152 a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~ 231 (279)
+++. +|++|+.+|+++++|..|+|++.++||+|+++++.++|++++++|+ |||+++|+|.+.++............
T Consensus 240 a~~~-~~v~~~~~D~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~---pgG~l~i~e~~~~~~~~~~~~~~~~~ 315 (364)
T 3p9c_A 240 APQF-PGVTHVGGDMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALP---AHGKVVLVQCILPVNPEANPSSQGVF 315 (364)
T ss_dssp CCCC-TTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHSC---TTCEEEEEECCBCSSCCSSHHHHHHH
T ss_pred hhhc-CCeEEEeCCcCCCCCCCCEEEehHHhccCCHHHHHHHHHHHHHHcC---CCCEEEEEEeccCCCCCcchhhhhHH
Confidence 9876 8999999999988776699999999999999999999999999999 79999999999887644322212234
Q ss_pred hcchhhhh-hcCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 232 CFDILMVS-LFRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 232 ~~d~~~~~-~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
.+|+.|+. ..+|++|+.+||+++|+++||+.+++.+.++..++||++|
T Consensus 316 ~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 316 HVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp HHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 67888885 4689999999999999999999999999999999999987
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=1.4e-45 Score=323.75 Aligned_cols=273 Identities=29% Similarity=0.562 Sum_probs=240.3
Q ss_pred CccccccCceeec----C----CCeEecChhcchhhc-CCCCChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhC
Q 023625 1 MRILVHSGFFAQQ----K----DDEYFLTPASRLLLK-DTPLKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHG 71 (279)
Q Consensus 1 Lr~L~~~g~l~~~----~----~~~y~~t~~s~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g 71 (279)
||+|++.|+|+++ + +++|+||+.|+.|+. +++.|+++++.+..++.++..|.+|.+++++|. ++|+..+|
T Consensus 84 Lr~L~~~gll~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g 162 (368)
T 3reo_A 84 LRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYG 162 (368)
T ss_dssp HHHHHHTTSEEEEEEECTTSCEEEEEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSS
T ss_pred HHHHHhCCCeEEecccCCCCcccceeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhC
Confidence 6899999999996 2 248999999996665 457889999888777788899999999999987 79999999
Q ss_pred CChhhhhhcCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhh
Q 023625 72 KKVWDRVADEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDN 151 (279)
Q Consensus 72 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 151 (279)
.++|+|+.++|+..+.|+++|...+......+++.++ .+.+..+|||||||+|.++..+++++|+++++++|+|.+++.
T Consensus 163 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 241 (368)
T 3reo_A 163 MNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYN-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQD 241 (368)
T ss_dssp SCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHTTCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTT
T ss_pred CCHHHHHhhCHHHHHHHHHHHHhhhhhHHHHHHHhcc-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHh
Confidence 9999999999999999999999888777777888776 366789999999999999999999999999999999999999
Q ss_pred cccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhh
Q 023625 152 LQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQL 231 (279)
Q Consensus 152 a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~ 231 (279)
+++. ++++++.+|+++++|..|+|++.++||+|+++++.++|++++++|+ |||+++|+|.+.++............
T Consensus 242 a~~~-~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~~~~~~~~ 317 (368)
T 3reo_A 242 APAF-SGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALP---DHGKVIVAEYILPPSPDPSIATKVVI 317 (368)
T ss_dssp CCCC-TTEEEEECCTTTCCCCCSEEEEESCGGGBCHHHHHHHHHHHHHHSC---TTCEEEEEECCCCSSCCCCHHHHHHH
T ss_pred hhhc-CCCEEEecCCCCCCCCCCEEEEechhhcCCHHHHHHHHHHHHHHcC---CCCEEEEEEeccCCCCCCchhhhHHH
Confidence 9876 7999999999988776699999999999999999999999999999 79999999999877644322112334
Q ss_pred hcchhhhhh-cCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 232 CFDILMVSL-FRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 232 ~~d~~~~~~-~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
.+|+.|+.. .++++|+.+||+++|+++||+.+++.+..+..++||++|
T Consensus 318 ~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 318 HTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp HHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred hhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEEeCCCcEEEEEEe
Confidence 678888865 489999999999999999999999999999999999987
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=1.1e-44 Score=316.06 Aligned_cols=268 Identities=24% Similarity=0.439 Sum_probs=238.5
Q ss_pred CccccccCceeecCCCeEecChhcchhhcCCCCChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhCCChhhhhhc
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPASRLLLKDTPLKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHGKKVWDRVAD 80 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~ 80 (279)
||+|++.|+|++ .+++|+||+.|+.|.++++.++.+++.++.++.++++|.+|++++++|. ++|+..+|.++|+++.+
T Consensus 76 Lr~l~~~g~l~~-~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~ 153 (348)
T 3lst_A 76 LRLLAVRDVVRE-SDGRFALTDKGAALRSDSPVPARAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDAYFDG 153 (348)
T ss_dssp HHHHHHTTSEEE-ETTEEEECTTTGGGSTTSSSCSHHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTT
T ss_pred HHHHHhCCCEEe-cCCEEecCHHHHHHhcCCCccHHHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHh
Confidence 689999999999 5569999999998888888889999888776767899999999999887 67888899999999999
Q ss_pred CchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhcc----cCC
Q 023625 81 EPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQ----GTN 156 (279)
Q Consensus 81 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~----~~~ 156 (279)
+|+....|.++|...+......+++.++ +++..+|||||||+|.++..+++++|+++++++|++.++..++ ...
T Consensus 154 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~ 231 (348)
T 3lst_A 154 DAEVEALYYEGMETVSAAEHLILARAGD--FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVA 231 (348)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHSC--CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGT
T ss_pred CHHHHHHHHHHHHHhhhhhHHHHHHhCC--ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCC
Confidence 9999999999999988877788888887 6788999999999999999999999999999999988877332 135
Q ss_pred CCeEEeeCCCCCCCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchh
Q 023625 157 DNLDFLGGNMFEAIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDIL 236 (279)
Q Consensus 157 ~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~ 236 (279)
+|++++.+|+++++|+||+|++.++||+|+++++.++|++++++|+ |||+++|.|.+.++.... .....+|+.
T Consensus 232 ~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lk---pgG~l~i~e~~~~~~~~~----~~~~~~d~~ 304 (348)
T 3lst_A 232 GRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVMP---AHGRVLVIDAVVPEGNDA----HQSKEMDFM 304 (348)
T ss_dssp TSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHTCC---TTCEEEEEECCBCSSSSC----CHHHHHHHH
T ss_pred CCeEEEecCCCCCCCCCcEEEEehhccCCCHHHHHHHHHHHHHhcC---CCCEEEEEEeccCCCCCc----chhhhcChh
Confidence 7899999999977779999999999999999999999999999999 799999999988776332 223467888
Q ss_pred hhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 237 MVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 237 ~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
|+...+++.|+.+||.++++++||+++++.+..+..++|+++|
T Consensus 305 ~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 305 MLAARTGQERTAAELEPLFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp HHHTTSCCCCBHHHHHHHHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred hhhcCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcEEEEEEe
Confidence 8887889999999999999999999999999778899999987
No 5
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=2.2e-44 Score=315.33 Aligned_cols=274 Identities=48% Similarity=0.887 Sum_probs=241.1
Q ss_pred CccccccCceeec-----C-----CCeEecChhcchhhcCCCCChHHHHHHhcChhhHHHHHHHhHhhhcCC-CChhHHh
Q 023625 1 MRILVHSGFFAQQ-----K-----DDEYFLTPASRLLLKDTPLKAAPFVDLVADPLYTTAFHCLGTWLQNDD-PSLFETA 69 (279)
Q Consensus 1 Lr~L~~~g~l~~~-----~-----~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~ 69 (279)
||+|++.|+|+++ + +++|++|+.|++|+++++.++++++.+..++.+++.|.+|++++++|. .++|+..
T Consensus 69 Lr~L~~~gll~~~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~ 148 (358)
T 1zg3_A 69 LRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECA 148 (358)
T ss_dssp HHHHHHTTSEEEEEECCSSSSCCCEEEEEECHHHHTTCTTSTTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHH
T ss_pred HHHHhhCCcEEEecccccccCCCCCCEEeCCHHHHHHhCCCCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHH
Confidence 6899999999988 3 369999999999999888889999988776777899999999999983 2789988
Q ss_pred hCCChhhhhhcCchHHH--HHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChh
Q 023625 70 HGKKVWDRVADEPKFKS--LFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPH 147 (279)
Q Consensus 70 ~g~~~~~~~~~~~~~~~--~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~ 147 (279)
+|.++|+++.++|+... .|+.+|...+.... .+++.+++.+.+..+|||||||+|.++..+++++|+++++++|++.
T Consensus 149 ~g~~~~~~~~~~p~~~~~~~f~~~m~~~~~~~~-~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~ 227 (358)
T 1zg3_A 149 TGESFWDFLNKDSESSTLSMFQDAMASDSRMFK-LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQ 227 (358)
T ss_dssp HSSCHHHHHTSGGGHHHHHHHHHHHHHHHHTHH-HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHH
T ss_pred hCCCHHHHHhcChhhhhHHHHHHHHhcccHHHH-HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHH
Confidence 99999999999999999 99999998777666 7888884346778999999999999999999999999999999999
Q ss_pred HHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCC---CcEEEEEeeecCCCCCCc
Q 023625 148 VVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDE---GGKVIIIDMAIENQSQDK 224 (279)
Q Consensus 148 ~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~p---gG~lli~e~~~~~~~~~~ 224 (279)
+++.+++. .+++++.+|+++++|.||+|++.++||+|+++++.++|++++++|+ | ||+++|+|.+.++....+
T Consensus 228 ~~~~a~~~-~~v~~~~~d~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~---p~~~gG~l~i~e~~~~~~~~~~ 303 (358)
T 1zg3_A 228 VVGNLTGN-ENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAIS---HKGKDGKVIIIDISIDETSDDR 303 (358)
T ss_dssp HHSSCCCC-SSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTG---GGGGGCEEEEEECEECTTCSCH
T ss_pred HHhhcccC-CCcEEEeCccCCCCCCceEEEEcccccCCCHHHHHHHHHHHHHhCC---CCCCCcEEEEEEeccCCCCccc
Confidence 99988875 5799999999988778999999999999999999999999999999 8 999999999987654331
Q ss_pred hhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 225 ESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 225 ~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
........+|+.|+...+|+.|+.+||.++|+++||+++++.+.++..++||++|
T Consensus 304 ~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 304 GLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEEETTTEEEEEEEC
T ss_pred hhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEecCCCcEEEEEeC
Confidence 1112344678888877789999999999999999999999999888899999997
No 6
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=5.6e-44 Score=312.14 Aligned_cols=272 Identities=47% Similarity=0.904 Sum_probs=238.9
Q ss_pred CccccccCceeec--CCCeEecChhcchhhcCCCCChHHHHHHhcChhhHHHHHHHhHhhh-cCCCChhHHhhCCChhhh
Q 023625 1 MRILVHSGFFAQQ--KDDEYFLTPASRLLLKDTPLKAAPFVDLVADPLYTTAFHCLGTWLQ-NDDPSLFETAHGKKVWDR 77 (279)
Q Consensus 1 Lr~L~~~g~l~~~--~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~~~~~~~~g~~~~~~ 77 (279)
||+|++.|+|+++ +++.|++|+.|++|+++++.++++++.+..++.++..|.+|+++++ +|. ++|+..+|.++|++
T Consensus 75 Lr~L~~~gll~~~~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~ 153 (352)
T 1fp2_A 75 MRYLAHNGFFEIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFWDF 153 (352)
T ss_dssp HHHHHHTTSEEEEESSSEEEEECHHHHTTSTTSSSCCHHHHHHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHHHH
T ss_pred HHHHHhCCeEEEecCCCCeEeCCHHHHHHhCCCCccHHHHHHHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHHHH
Confidence 5889999999998 3569999999999999888889999988777778899999999999 666 88998899999999
Q ss_pred hhcCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhcccCCC
Q 023625 78 VADEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQGTND 157 (279)
Q Consensus 78 ~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ 157 (279)
+.++|+....|..+|........+. ++.+++.+.+..+|||||||+|.++..+++++|+++++++|++.+++.+++. .
T Consensus 154 ~~~~~~~~~~f~~~m~~~~~~~~~~-~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-~ 231 (352)
T 1fp2_A 154 LDKNPEYNTSFNDAMASDSKLINLA-LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGS-N 231 (352)
T ss_dssp HHHCHHHHHHHHHHHHHTHHHHHHH-HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCB-T
T ss_pred HHhChHHHHHHHHHHHhcchhhhhH-HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccC-C
Confidence 9999999999999999887776666 7777434778899999999999999999999999999999999999999875 5
Q ss_pred CeEEeeCCCCCCCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCC---CcEEEEEeeecCCCCCCchhhhhhhhcc
Q 023625 158 NLDFLGGNMFEAIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDE---GGKVIIIDMAIENQSQDKESMETQLCFD 234 (279)
Q Consensus 158 ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~p---gG~lli~e~~~~~~~~~~~~~~~~~~~d 234 (279)
+++++.+|+++++|.||+|++.++||+|+++++.++|++++++|+ | ||+++|.|...++....+........+|
T Consensus 232 ~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~---p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d 308 (352)
T 1fp2_A 232 NLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVT---NDGKRGKVTIIDMVIDKKKDENQVTQIKLLMD 308 (352)
T ss_dssp TEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHHS---GGGCCCEEEEEECEECTTTSCHHHHHHHHHHH
T ss_pred CcEEEeccccCCCCCccEEEeehhhccCCHHHHHHHHHHHHHhCC---CCCCCcEEEEEEeecCCCCCccchhhhHhhcc
Confidence 799999999887778999999999999999999999999999999 8 9999999998876543211112234677
Q ss_pred hhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 235 ILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 235 ~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
+.|+. .+++.|+.++|.++++++||+++++.+.++..++||++|
T Consensus 309 ~~~~~-~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 309 VNMAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp HHGGG-GTCCCEEHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHh-ccCCCCCHHHHHHHHHHCCCCeeEEEecCCCcEEEEEeC
Confidence 77776 568889999999999999999999999888899999997
No 7
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=3.6e-44 Score=315.09 Aligned_cols=268 Identities=28% Similarity=0.506 Sum_probs=241.4
Q ss_pred CccccccCceeecCCCe-EecChhcchhhcCCCCChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhCCChhhhhh
Q 023625 1 MRILVHSGFFAQQKDDE-YFLTPASRLLLKDTPLKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHGKKVWDRVA 79 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~-y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~ 79 (279)
||+|++.|+|+++++|+ |++|+.++.|.++++.++.+++.++.++..+..|.+|.++++++. ++|...+|.++|+|+.
T Consensus 92 Lr~L~~~g~l~~~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~ 170 (369)
T 3gwz_A 92 LRLLATVGVFDDLGHDDLFAQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTH 170 (369)
T ss_dssp HHHHHHTTSSEECSSTTEEECCHHHHTTSCCTTCHHHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHH
T ss_pred HHHHHhCCCEEEeCCCceEecCHHHHHHhcCCchhHHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHH
Confidence 68999999999987778 999999998888888889998888776667899999999999988 6788889999999999
Q ss_pred cCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc-----
Q 023625 80 DEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG----- 154 (279)
Q Consensus 80 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~----- 154 (279)
++|+....|.++|..........+++.++ +.+..+|||||||+|.++..+++++|+++++++|++.+++.+++
T Consensus 171 ~~~~~~~~f~~~m~~~~~~~~~~l~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~ 248 (369)
T 3gwz_A 171 EDPKARELFNRAMGSVSLTEAGQVAAAYD--FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGR 248 (369)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHT
T ss_pred hCHHHHHHHHHHHHHHHhhhHHHHHHhCC--CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhc
Confidence 99999999999999888777788888886 67789999999999999999999999999999999988988874
Q ss_pred -CCCCeEEeeCCCCCCCC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhh
Q 023625 155 -TNDNLDFLGGNMFEAIP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLC 232 (279)
Q Consensus 155 -~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~ 232 (279)
..+|++++.+|+++++| +||+|++.++||+|+++++.++|++++++|+ |||+++|+|.+.++.... . ...
T Consensus 249 ~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~---pgG~l~i~e~~~~~~~~~----~-~~~ 320 (369)
T 3gwz_A 249 GLADRCEILPGDFFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAMK---PDSRLLVIDNLIDERPAA----S-TLF 320 (369)
T ss_dssp TCTTTEEEEECCTTTCCCSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCC---TTCEEEEEEEBCCSSCCH----H-HHH
T ss_pred CcCCceEEeccCCCCCCCCCceEEEhhhhhccCCHHHHHHHHHHHHHHcC---CCCEEEEEEeccCCCCCC----c-hhH
Confidence 35799999999998777 7999999999999999999999999999999 799999999998775432 2 447
Q ss_pred cchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEe-cCCceeEEEEeC
Q 023625 233 FDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITP-MLGVRSLIEAYP 279 (279)
Q Consensus 233 ~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~-~~~~~~~i~~~~ 279 (279)
.|+.|+...++++|+.+||+++++++||+++++.+ ..+..++||++|
T Consensus 321 ~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 321 VDLLLLVLVGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred hhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 88888888899999999999999999999999999 678899999987
No 8
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=5.8e-44 Score=309.69 Aligned_cols=265 Identities=26% Similarity=0.429 Sum_probs=232.9
Q ss_pred CccccccCceeecCCCeEecChhcchhhcCCCCChHHHHHHhcChhhH-HHHHHHhHhhhcCCCChhHHhhCCChhhhhh
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPASRLLLKDTPLKAAPFVDLVADPLYT-TAFHCLGTWLQNDDPSLFETAHGKKVWDRVA 79 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~ 79 (279)
||+|++.|+|+++++++|.+|+.|+.|.++++.++.+++.+..+...+ ..|.+|+++++++. ++|+..+|.++|+++.
T Consensus 59 Lr~l~~~gl~~~~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~ 137 (332)
T 3i53_A 59 LRHLVAVGLFTRDGQGVYGLTEFGEQLRDDHAAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLG 137 (332)
T ss_dssp HHHHHHTTSEEECTTSBEEECTTGGGGSTTCTTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHH
T ss_pred HHHHHhCCcEEecCCCeEEcCHhHHHHhcCCchhHHHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHH
Confidence 589999999999877799999999988888888899888776544455 78999999999998 6788889999999999
Q ss_pred cCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc-----
Q 023625 80 DEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG----- 154 (279)
Q Consensus 80 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~----- 154 (279)
++|+....|...|...+....+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++
T Consensus 138 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~ 215 (332)
T 3i53_A 138 SDPVLSASFDTLMSHHLELDYTGIAAKYD--WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDT 215 (332)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHTTGGGSSC--CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHT
T ss_pred hCHHHHHHHHHHHHHhHHhhHHHHHHhCC--CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhc
Confidence 99999999999999877666666666665 56678999999999999999999999999999999999988874
Q ss_pred -CCCCeEEeeCCCCCCCC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhh
Q 023625 155 -TNDNLDFLGGNMFEAIP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLC 232 (279)
Q Consensus 155 -~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~ 232 (279)
..+|++|+.+|+++++| +||+|+++++||+|+++++.++|++++++|+ |||+++|.|.+.++. . + ...
T Consensus 216 ~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~--~-~----~~~ 285 (332)
T 3i53_A 216 GLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAG---SGGVVLVIEAVAGDE--H-A----GTG 285 (332)
T ss_dssp TCTTTEEEEECCTTSCCCCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHT---TTCEEEEEECCCC------C----CHH
T ss_pred CcCcCeEEecCCCCCCCCCCCcEEEEehhhccCCHHHHHHHHHHHHHhcC---CCCEEEEEeecCCCC--C-c----cHH
Confidence 35799999999998777 7999999999999999999999999999999 799999999988765 2 1 236
Q ss_pred cchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 233 FDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 233 ~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
+|+.|+...+++.|+.+||.++++++||+++++.+.++ .++||+|+
T Consensus 286 ~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 286 MDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp HHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred HHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECCC-cEEEEEee
Confidence 78888888889999999999999999999999999988 99999985
No 9
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.8e-42 Score=300.48 Aligned_cols=265 Identities=25% Similarity=0.398 Sum_probs=234.5
Q ss_pred CccccccCceeecCCCeEecChhcchhhcCCCCChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhCCChhhhhhc
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPASRLLLKDTPLKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHGKKVWDRVAD 80 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~~ 80 (279)
||+|++.|+|++++++.|++|+.|+.|. ++|.++++++.+..++.. ..|.+|+++++++. ++|+..+|.++|+++.+
T Consensus 62 Lr~L~~~g~l~~~~~~~y~~t~~s~~l~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~ 138 (334)
T 2ip2_A 62 MRLLVAFEIFQGDTRDGYANTPTSHLLR-DVEGSFRDMVLFYGEEFH-AAWTPACEALLSGT-PGFELAFGEDFYSYLKR 138 (334)
T ss_dssp HHHHHHTTSEEEETTTEEEECHHHHTTS-SSTTCSHHHHHHHTTHHH-HHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHH
T ss_pred HHHHHhCCceEecCCCeEecCHHHHHHh-CCCccHHHHHHHhcCchh-hHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhh
Confidence 6899999999998877999999999888 888889999888776555 89999999999988 78988899999999999
Q ss_pred CchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc------
Q 023625 81 EPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG------ 154 (279)
Q Consensus 81 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------ 154 (279)
+|+....|.+.| ..+....+.+++.++ +.+ .+|||||||+|.++..+++++|+.+++++|++.+++.+++
T Consensus 139 ~~~~~~~f~~~m-~~~~~~~~~~~~~~~--~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~ 214 (334)
T 2ip2_A 139 CPDAGRRFLLAM-KASNLAFHEIPRLLD--FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLL 214 (334)
T ss_dssp CHHHHHHHHHHH-GGGHHHHHHHHHHSC--CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHH
T ss_pred ChHHHHHHHHHH-HHHHHHHHHHHHhCC--CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcC
Confidence 999999999999 877777777888776 566 8999999999999999999999999999999888888764
Q ss_pred CCCCeEEeeCCCCCCCC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhc
Q 023625 155 TNDNLDFLGGNMFEAIP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF 233 (279)
Q Consensus 155 ~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~ 233 (279)
..++++++.+|+++++| +||+|++.+++|+|+++++.++|++++++|+ |||+++|.|...++.... .....+
T Consensus 215 ~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~----~~~~~~ 287 (334)
T 2ip2_A 215 AGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMA---GDGRVVVIERTISASEPS----PMSVLW 287 (334)
T ss_dssp HTTSEEEEESCTTTCCCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSC---TTCEEEEEECCBCSSSCC----HHHHHH
T ss_pred CCCcEEEecCCCCCCCCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcC---CCCEEEEEEeccCCCCCc----chhHHh
Confidence 24789999999998766 5999999999999999999999999999999 799999999988765332 224467
Q ss_pred chhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 234 DILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 234 d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
|+.|+...+++.|+.++|.++++++||+++++.+.++..++|+++|
T Consensus 288 ~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 288 DVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred hhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEECCCCCEEEEEEe
Confidence 8888877789999999999999999999999999988899999986
No 10
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=2.4e-42 Score=303.87 Aligned_cols=274 Identities=27% Similarity=0.511 Sum_probs=225.0
Q ss_pred CccccccCceeec----C----CCeEecChhcchhhcCCC-CChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhC
Q 023625 1 MRILVHSGFFAQQ----K----DDEYFLTPASRLLLKDTP-LKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHG 71 (279)
Q Consensus 1 Lr~L~~~g~l~~~----~----~~~y~~t~~s~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g 71 (279)
||+|++.|+|+++ + +++|++|+.+++|+++++ .++++++.+..++.++..|.+|+++++++..++|+..+|
T Consensus 89 Lr~L~~~gll~~~~~~~~~g~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g 168 (372)
T 1fp1_D 89 LRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHG 168 (372)
T ss_dssp HHHHHHTTSEEEEEEECTTSCEEEEEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC---------
T ss_pred HHHHhhCCceEecccccCCCCcCCeEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCCChhHHHhC
Confidence 6899999999987 2 249999999999998887 789999888777778899999999999982278888889
Q ss_pred CChhhhhhcCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhh
Q 023625 72 KKVWDRVADEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDN 151 (279)
Q Consensus 72 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 151 (279)
.++|+++.++|+....|+.+|...+......+++.++ .+.+..+|||||||+|.++..+++++|+++++++|++.+++.
T Consensus 169 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~ 247 (372)
T 1fp1_D 169 VTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIEN 247 (372)
T ss_dssp -----CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTT
T ss_pred CCHHHHHHhCHHHHHHHHHHHHhhhHHHHHHHHHHhh-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHh
Confidence 9999999999999999999999887777777888775 356788999999999999999999999999999999999999
Q ss_pred cccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhh
Q 023625 152 LQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQL 231 (279)
Q Consensus 152 a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~ 231 (279)
+++. ++++++.+|+++++|.||+|++.++||+|+++++.++|++++++|+ |||+++|.|...++....+.......
T Consensus 248 a~~~-~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~~~~~~~~ 323 (372)
T 1fp1_D 248 APPL-SGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALS---PNGKVIIVEFILPEEPNTSEESKLVS 323 (372)
T ss_dssp CCCC-TTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEEECSSCCSSHHHHHHH
T ss_pred hhhc-CCCEEEeCCcccCCCCCCEEEEecccccCCHHHHHHHHHHHHHhcC---CCCEEEEEEeccCCCCccchHHHHHH
Confidence 9876 6899999999987778999999999999999999999999999999 79999999998877543311001234
Q ss_pred hcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEe-cCCceeEEEEeC
Q 023625 232 CFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITP-MLGVRSLIEAYP 279 (279)
Q Consensus 232 ~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~-~~~~~~~i~~~~ 279 (279)
.+|+.|+...+++.|+.++|+++++++||+++++.+ .++..++||++|
T Consensus 324 ~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 324 TLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred HhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 677777766678999999999999999999999988 455249999997
No 11
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=8.9e-40 Score=286.39 Aligned_cols=269 Identities=26% Similarity=0.508 Sum_probs=231.7
Q ss_pred CccccccCceeecCCCeEecChhcchhhcCCCCChHHHHHHhcChh-hHHHHHHHhHhhhcCCCChhHHhhCCChhhhhh
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPASRLLLKDTPLKAAPFVDLVADPL-YTTAFHCLGTWLQNDDPSLFETAHGKKVWDRVA 79 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~ 79 (279)
||+|++.|+|++..+|+|++|+.+++|+++++.++++++.+..++. .+..|.+|.+.+++|. ++|+..+|.++|+++.
T Consensus 73 L~~L~~~g~~~~~~~g~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~ 151 (360)
T 1tw3_A 73 IRHLVAIGLLEEDAPGEFVPTEVGELLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFYEDLA 151 (360)
T ss_dssp HHHHHHTTSEEEEETTEEEECTTGGGGSTTSTTCHHHHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHH
T ss_pred HHHHHHCCCEEecCCCeEEeCHHHHHHhcCCchhHHHHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHH
Confidence 6889999999997777999999999999999888998877665433 5678999999999987 5678888999999999
Q ss_pred cCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc-----
Q 023625 80 DEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG----- 154 (279)
Q Consensus 80 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~----- 154 (279)
++|+....|...|........+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|++.+++.+++
T Consensus 152 ~~p~~~~~f~~~~~~~~~~~~~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~ 229 (360)
T 1tw3_A 152 GRPDLRASFDSLLACDQDVAFDAPAAAYD--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDE 229 (360)
T ss_dssp TCHHHHHHHHHHHTTTTTTTTHHHHHHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHT
T ss_pred hChHHHHHHHHHHHHHHHHhHHHHHHhCC--CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhc
Confidence 99999999999999877777777888776 66788999999999999999999999999999999888887764
Q ss_pred -CCCCeEEeeCCCCCCCC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee-cCCCCCCchhhhhhh
Q 023625 155 -TNDNLDFLGGNMFEAIP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA-IENQSQDKESMETQL 231 (279)
Q Consensus 155 -~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~-~~~~~~~~~~~~~~~ 231 (279)
..++++++.+|+++++| +||+|++.+++|+|+++++.++|++++++|+ |||++++.|.. .++.... ....
T Consensus 230 ~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~----~~~~ 302 (360)
T 1tw3_A 230 GLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALE---PGGRILIHERDDLHENSFN----EQFT 302 (360)
T ss_dssp TCTTTEEEEECCTTSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEE---EEEEEEEEECCBCGGGCCS----HHHH
T ss_pred CCCCceEEEeCCCCCCCCCCccEEEEcccccCCCHHHHHHHHHHHHHhcC---CCcEEEEEEEeccCCCCCc----chhh
Confidence 34589999999998766 4999999999999999999999999999999 79999999988 6544322 1233
Q ss_pred hcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCCc-----eeEEEEeC
Q 023625 232 CFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLGV-----RSLIEAYP 279 (279)
Q Consensus 232 ~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~-----~~~i~~~~ 279 (279)
.+++.|+...+++.++.++|.++++++||+++++.+.++. .++|+++|
T Consensus 303 ~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 303 ELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp HHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred hccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 5677777767899999999999999999999999888765 78999875
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=1.2e-39 Score=287.06 Aligned_cols=269 Identities=22% Similarity=0.393 Sum_probs=228.7
Q ss_pred CccccccCceeecCCC--eEecChhcchhhcCCCCChHHHHHHhcChhhH-HHHHHHhHhhhcCCCChhHHhhCCChhhh
Q 023625 1 MRILVHSGFFAQQKDD--EYFLTPASRLLLKDTPLKAAPFVDLVADPLYT-TAFHCLGTWLQNDDPSLFETAHGKKVWDR 77 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~--~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~g~~~~~~~~~g~~~~~~ 77 (279)
||+|++.|+|++..+| .|++|+.+++|.++++.++++++.+..++..+ ..|.+|.+.+++|. ++|+..+|.++|++
T Consensus 70 Lr~L~~~Gll~~~~~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~ 148 (374)
T 1qzz_A 70 VRHLTVVGVLEGGEKQGRPLRPTRLGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWED 148 (374)
T ss_dssp HHHHHHTTSEECCCC-CCCCEECTTGGGGSTTCTTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHH
T ss_pred HHHHhhCCCEEEeCCCCeEEEEChHHHhhcCCCcccHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHH
Confidence 6899999999997777 89999999999999888899888776544556 78999999999987 67888889999999
Q ss_pred hhcCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc---
Q 023625 78 VADEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG--- 154 (279)
Q Consensus 78 ~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~--- 154 (279)
+.++|+....|...|........+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|++.+++.+++
T Consensus 149 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~ 226 (374)
T 1qzz_A 149 LSADVALADSFDALMSCDEDLAYEAPADAYD--WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFA 226 (374)
T ss_dssp HHHCHHHHHHHHHTCGGGSTTTTHHHHHTSC--CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHH
T ss_pred HhhChHHHHHHHHHHHHhhHhHHHHHHHhCC--CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHH
Confidence 9999999999999999877766677888776 66788999999999999999999999999999999888888764
Q ss_pred ---CCCCeEEeeCCCCCCCC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee--ecCCCCCCchhhh
Q 023625 155 ---TNDNLDFLGGNMFEAIP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM--AIENQSQDKESME 228 (279)
Q Consensus 155 ---~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~--~~~~~~~~~~~~~ 228 (279)
..++++++.+|+++++| +||+|++.+++|+|+++++.++|++++++|+ |||+++|.|. ..++.... .
T Consensus 227 ~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~~----~ 299 (374)
T 1qzz_A 227 DAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALE---PGGRLLVLDRADVEGDGADR----F 299 (374)
T ss_dssp HTTCTTTEEEEECCTTSCCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEECCH-------H----H
T ss_pred hcCCCCceEEEeCCCCCcCCCCCCEEEEeccccCCCHHHHHHHHHHHHHhcC---CCcEEEEEechhhcCCCCCc----c
Confidence 33589999999988766 4999999999999999999999999999999 7999999998 76554221 2
Q ss_pred hhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCCce-----eEEEEeC
Q 023625 229 TQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLGVR-----SLIEAYP 279 (279)
Q Consensus 229 ~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~-----~~i~~~~ 279 (279)
....+++.|+...+++.++.++|.++++++||+++++.+.++.. ++|+++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 300 FSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp HHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred hhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 23466777777778999999999999999999999999888776 8999874
No 13
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=7.5e-39 Score=280.65 Aligned_cols=266 Identities=20% Similarity=0.275 Sum_probs=210.4
Q ss_pred CccccccCceeecCCCeEecChhcchhhcCCCCChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhC--CChhhhh
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPASRLLLKDTPLKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHG--KKVWDRV 78 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g--~~~~~~~ 78 (279)
||+|++.|+|++++ ++|+||+.|++|+++++.+ .++.+. .+..+++|.+|++++|+|+ .++...+| .++|+++
T Consensus 71 Lr~l~~~g~l~~~~-~~y~~t~~s~~L~~~~~~~--~~~~~~-~~~~~~~~~~L~~~lr~g~-~~~~~~~g~~~~~~~~~ 145 (363)
T 3dp7_A 71 LEASLTIGTILLEE-DRYVLAKAGWFLLNDKMAR--VNMEFN-HDVNYQGLFHLEEALLNGR-PEGLKVFGEWPTIYEGL 145 (363)
T ss_dssp HHHHHHHTSEEEET-TEEEECHHHHHHHHCHHHH--HHHHHH-HHTTHHHHTTHHHHHHHSS-CGGGGGTCCCSSHHHHG
T ss_pred HHHHhhCCCeEecC-CEEecccchHHhhCCCccc--chheee-cHHhhhhHHHHHHHHhcCC-CccccccCchHhHHHHH
Confidence 68999999999975 5999999999998877632 233333 3567899999999999998 56667777 6899999
Q ss_pred hcCchHHHH----HHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc
Q 023625 79 ADEPKFKSL----FYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG 154 (279)
Q Consensus 79 ~~~~~~~~~----f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 154 (279)
.++|+.... |...|..... ..+++.+. ..+..+|||||||+|.++..+++++|+++++++|+|.+++.|++
T Consensus 146 ~~~~~~~~~~~~~f~~~~~~~~~---~~~l~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 220 (363)
T 3dp7_A 146 SQLPEQVQKSWFGFDHFYSDQSF---GKALEIVF--SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRK 220 (363)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCCC---HHHHHHHG--GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHHHhhhhhH---HHHHHHhc--ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHH
Confidence 999987763 6666655321 23444433 25678999999999999999999999999999999999988874
Q ss_pred ------CCCCeEEeeCCCCCC---CC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCc
Q 023625 155 ------TNDNLDFLGGNMFEA---IP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDK 224 (279)
Q Consensus 155 ------~~~ri~~~~~d~~~~---~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~ 224 (279)
..+|++++.+|++++ .| +||+|++.++||+|+++++.++|++++++|+ |||+++|+|.+.++.....
T Consensus 221 ~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~ 297 (363)
T 3dp7_A 221 QTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIG---KDSKVYIMETLWDRQRYET 297 (363)
T ss_dssp HHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCC---TTCEEEEEECCTTSCSSHH
T ss_pred HHHhcCcccceEEEEccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcC---CCcEEEEEeeccCCccccc
Confidence 236899999999984 56 6999999999999999999999999999999 7999999999887654331
Q ss_pred hhh-hhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCC-ceeEEEEeC
Q 023625 225 ESM-ETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLG-VRSLIEAYP 279 (279)
Q Consensus 225 ~~~-~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~-~~~~i~~~~ 279 (279)
... ......++.++...+++.|+.+||+++|+++||+++++.+..+ ..++|+.+|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 298 ASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred hhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEee
Confidence 100 0111223334444568899999999999999999999987654 489999875
No 14
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=4e-37 Score=266.90 Aligned_cols=264 Identities=20% Similarity=0.299 Sum_probs=223.2
Q ss_pred CccccccCceeecCCCeEecChhc-chhhcCCCCChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhCCChhhhhh
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPAS-RLLLKDTPLKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHGKKVWDRVA 79 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~ 79 (279)
||+|++.|+|++.+ ++|++|+.+ ++|.++++.|+++++.+..++..++.|.+|+++++++. ++|+ + |+++.
T Consensus 60 L~~L~~~g~l~~~~-~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~-----~-~~~~~ 131 (335)
T 2r3s_A 60 CDYLVIIGFMTKQA-EGYRLTSDSAMFLDRQSKFYVGDAIEFLLSPMITNGFNDLTAAVLKGG-TAIS-----S-EGTLS 131 (335)
T ss_dssp HHHHHHTTSEEEET-TEEEECHHHHHHTCTTSTTCCGGGHHHHTCHHHHGGGTTHHHHHHHTS-CCST-----T-TGGGS
T ss_pred HHHHHhcCCeEecC-CEEecCHHHHHHhccCCcHHHHHHHHHhcchhhHHHHHhHHHHHhcCC-CCCC-----C-ccccc
Confidence 68999999999865 599999999 69999888889999888766567889999999999987 3332 3 88888
Q ss_pred cCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc-----
Q 023625 80 DEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG----- 154 (279)
Q Consensus 80 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~----- 154 (279)
++++....|...|..........+++.+++.+.+..+|||||||+|.++..+++++|+.+++++|++.+++.+++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~ 211 (335)
T 2r3s_A 132 PEHPVWVQFAKAMSPMMANPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQ 211 (335)
T ss_dssp TTCTHHHHHHHHSGGGGHHHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhc
Confidence 999999999999988777777778887762126788999999999999999999999999999999988887764
Q ss_pred -CCCCeEEeeCCCCC-CCC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhh
Q 023625 155 -TNDNLDFLGGNMFE-AIP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQL 231 (279)
Q Consensus 155 -~~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~ 231 (279)
..++++++.+|+++ +.+ +||+|++.+++|+|+++++.++|++++++|+ |||+++++|...++....+ ....
T Consensus 212 ~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~---~~~~ 285 (335)
T 2r3s_A 212 GVASRYHTIAGSAFEVDYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALA---VEGKVIVFDFIPNSDRITP---PDAA 285 (335)
T ss_dssp TCGGGEEEEESCTTTSCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEECCCCTTSSCS---HHHH
T ss_pred CCCcceEEEecccccCCCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCC---CCcEEEEEeecCCCCcCCc---hHHH
Confidence 24689999999998 565 4999999999999999999999999999999 7999999998877643331 2234
Q ss_pred hcchhhhhhc-CCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEe
Q 023625 232 CFDILMVSLF-RGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAY 278 (279)
Q Consensus 232 ~~d~~~~~~~-~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 278 (279)
.+++.|+... +++.++.++|.++++++||+++++.+.++..++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 286 AFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp HHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred HHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEECCCCceeEEEe
Confidence 6777777766 7899999999999999999999999988777766654
No 15
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=4.5e-37 Score=268.42 Aligned_cols=259 Identities=19% Similarity=0.326 Sum_probs=213.1
Q ss_pred CccccccCceeecCCCeEecChhcc-hhhcCCCCChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhCCChhhhhh
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPASR-LLLKDTPLKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHGKKVWDRVA 79 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~~~~ 79 (279)
||+|++.|+|+++++ +|.+|+.++ +|.++++.+++.++.+. ...+..|.+|++++++|.|..|+.. .++.
T Consensus 77 Lr~L~~~gll~~~~~-~y~~t~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~~------~~~~ 147 (352)
T 3mcz_A 77 LHALAALGLLTKEGD-AFRNTALTERYLTTTSADYIGPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQE------SRFA 147 (352)
T ss_dssp HHHHHHTTSEEEETT-EEEECHHHHHHHSTTCTTCCHHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSHH------HHTT
T ss_pred HHHHHHCCCeEecCC-eeecCHHHHhhccCCChhhHHHHHHHh--HHHHHHHHHHHHHHhCCCCCCcccc------cccc
Confidence 689999999999885 999999997 78888898999887765 3456889999999999976554321 2345
Q ss_pred cCchHHHHHHHHhhhcchhhHHHHHHhchhhhCC-CCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc----
Q 023625 80 DEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEG-LKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG---- 154 (279)
Q Consensus 80 ~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~-~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~---- 154 (279)
++|+....|..+|...... ...+++.++ +.+ ..+|||||||+|.++..+++++|+++++++|++.+++.+++
T Consensus 148 ~~~~~~~~f~~~m~~~~~~-~~~~l~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~ 224 (352)
T 3mcz_A 148 HDTRARDAFNDAMVRLSQP-MVDVVSELG--VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHA 224 (352)
T ss_dssp TCHHHHHHHHHHHHHHHHH-HHHHHHTCG--GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhhhh-HHHHHHhCC--CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHh
Confidence 7888889999999873322 236778777 555 88999999999999999999999999999999888887763
Q ss_pred --CCCCeEEeeCCCCCC---CC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhh
Q 023625 155 --TNDNLDFLGGNMFEA---IP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESME 228 (279)
Q Consensus 155 --~~~ri~~~~~d~~~~---~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~ 228 (279)
..+|++++.+|++++ .+ +||+|++.+++|+|+++++.++|++++++|+ |||+++|.|.+.++....+ .
T Consensus 225 ~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~---~ 298 (352)
T 3mcz_A 225 HDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVK---PGGALLILTMTMNDDRVTP---A 298 (352)
T ss_dssp TTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEE---EEEEEEEEEECCCTTSSSS---H
T ss_pred cCCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcC---CCCEEEEEEeccCCCCCCC---c
Confidence 246899999999984 45 4999999999999999999999999999999 7999999999988765432 2
Q ss_pred hhhhcchhhhhhc-CCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 229 TQLCFDILMVSLF-RGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 229 ~~~~~d~~~~~~~-~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
....+++.|+... +++.|+.++|+++++++||++++.. .+..+++++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 299 LSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp HHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred hHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeec--cCceEEEEEec
Confidence 3457788887755 6899999999999999999998843 34567777664
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=2.4e-36 Score=264.54 Aligned_cols=254 Identities=19% Similarity=0.359 Sum_probs=214.6
Q ss_pred CccccccCceeecCCCeEecChhc-chhhcCCC---CChHHHHHHhcChhhHHHHHHHhHhhhcCCCChhHHhhCCChhh
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPAS-RLLLKDTP---LKAAPFVDLVADPLYTTAFHCLGTWLQNDDPSLFETAHGKKVWD 76 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s-~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~~~g~~~~~ 76 (279)
||+|++.|+|+++++ +|++|+.+ .+|.++++ .++++++.+.. ...++.|.+|++++++|.| |+
T Consensus 85 Lr~L~~~gll~~~~~-~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~l~~g~~-----------~~ 151 (359)
T 1x19_A 85 LETLRQMRVINLEDG-KWSLTEFADYMFSPTPKEPNLHQTPVAKAMA-FLADDFYMGLSQAVRGQKN-----------FK 151 (359)
T ss_dssp HHHHHHTTSEEEETT-EEEECHHHHHHSSSSCSBTTBCCHHHHHHHH-HHHHHTGGGHHHHHTTSCC-----------CC
T ss_pred HHHHHhCCCeEeeCC-eEecCHHHHHHhcCCCCCccccHHHHHHHHH-HHHHHHHHHHHHHHhcCCC-----------Cc
Confidence 689999999999875 99999964 58888888 88998887763 5678899999999998863 67
Q ss_pred hhhcCch---HHHHHHHHhhhcch-hhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhc
Q 023625 77 RVADEPK---FKSLFYDLMITDSE-LIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNL 152 (279)
Q Consensus 77 ~~~~~~~---~~~~f~~~m~~~~~-~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a 152 (279)
++.++|+ ....|...|..... .....+++.++ +.+..+|||||||+|.++..+++++|+++++++|++.+++.+
T Consensus 152 ~~~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a 229 (359)
T 1x19_A 152 GQVPYPPVTREDNLYFEEIHRSNAKFAIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLV 229 (359)
T ss_dssp CSSCSSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCC--CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHH
T ss_pred ccccCchhhHHHHHHHHHHHHhccchhHHHHHHhcC--CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHH
Confidence 7788888 88999999998877 77777888876 677889999999999999999999999999999998888887
Q ss_pred cc------CCCCeEEeeCCCCC-CCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCch
Q 023625 153 QG------TNDNLDFLGGNMFE-AIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKE 225 (279)
Q Consensus 153 ~~------~~~ri~~~~~d~~~-~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~ 225 (279)
++ ..+|++++.+|+++ +.+++|+|++.+++|+|+++++.++|++++++|+ |||+++|+|...++. .. +
T Consensus 230 ~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~-~~-~ 304 (359)
T 1x19_A 230 NENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMR---SGGRLLILDMVIDDP-EN-P 304 (359)
T ss_dssp HHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCC---TTCEEEEEEECCCCT-TS-C
T ss_pred HHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhccCCHHHHHHHHHHHHHhcC---CCCEEEEEecccCCC-CC-c
Confidence 73 34689999999998 5666799999999999999999999999999999 799999999988765 22 1
Q ss_pred hhhhhhhcchhhhhh-cCCee----CCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 226 SMETQLCFDILMVSL-FRGKE----RSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 226 ~~~~~~~~d~~~~~~-~~~~~----r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
.....+ .|+.. .++++ ++.++|.++++++||+++++.+.+ ..++|+++|
T Consensus 305 --~~~~~~--~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 305 --NFDYLS--HYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp --CHHHHH--HHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred --hHHHHH--HHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 111222 34432 34667 899999999999999999999888 778898875
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.88 E-value=2.3e-21 Score=161.70 Aligned_cols=164 Identities=18% Similarity=0.232 Sum_probs=123.2
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCCccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIPQANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~~~D~v~~~~ 180 (279)
.+++.+|||||||+|.++..+++++ |+++++++|+ +.+++.|++ ...+++++.+|+.+ +.+++|+|++..
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 4678999999999999999999985 6789999999 999998874 24689999999988 777899999999
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhh---h----------c-CCeeC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVS---L----------F-RGKER 246 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~---~----------~-~~~~r 246 (279)
+||++++++..++|++++++|+ |||++++.|............ ....+.+..... . . --...
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~Lk---pGG~lii~e~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLN---PGGALVLSEKFSFEDAKVGEL-LFNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEBCCSSHHHHHH-HHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeecCchhHhHHHHHHHHHcC---CCcEEEEEeccCCCCHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 9999999988899999999999 799999999876654211100 000011110000 0 0 01235
Q ss_pred CHHHHHHHHHHCCCceeEEEe-cCCceeEEEEe
Q 023625 247 SVDDWKKLFLAAGFSHYKITP-MLGVRSLIEAY 278 (279)
Q Consensus 247 ~~~e~~~ll~~aGf~~~~~~~-~~~~~~~i~~~ 278 (279)
+.+++.++|++|||+.++++- .-.+.++|-.+
T Consensus 224 s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp CHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 889999999999999988753 34555665443
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.84 E-value=9.8e-20 Score=149.45 Aligned_cols=163 Identities=13% Similarity=0.217 Sum_probs=123.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-CCC-ccceeeehhhhccC
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-AIP-QANAVLLKWILHNW 185 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~~ 185 (279)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .||+|++..++|++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHL 122 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGS
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccC
Confidence 4568999999999999999999999999999999 8888887742 2389999999988 444 69999999999999
Q ss_pred ChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcch--------h-h---h-hhcCCeeCCHHHHH
Q 023625 186 NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDI--------L-M---V-SLFRGKERSVDDWK 252 (279)
Q Consensus 186 ~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~--------~-~---~-~~~~~~~r~~~e~~ 252 (279)
++++..++|++++++|+ |||++++.+...+........ ....+... . . . .......++.+++.
T Consensus 123 ~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (234)
T 3dtn_A 123 EDEDKKELYKRSYSILK---ESGIFINADLVHGETAFIENL-NKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQL 198 (234)
T ss_dssp CHHHHHHHHHHHHHHEE---EEEEEEEEEECBCSSHHHHHH-HHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHH
T ss_pred CHHHHHHHHHHHHHhcC---CCcEEEEEEecCCCChhhhhH-HHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHH
Confidence 99888899999999999 799999999876543211000 00000000 0 0 0 00123456889999
Q ss_pred HHHHHCCCceeEEEecCCceeEEEEe
Q 023625 253 KLFLAAGFSHYKITPMLGVRSLIEAY 278 (279)
Q Consensus 253 ~ll~~aGf~~~~~~~~~~~~~~i~~~ 278 (279)
++|++|||+.+++.......+++..+
T Consensus 199 ~ll~~aGF~~v~~~~~~~~~~~~~~~ 224 (234)
T 3dtn_A 199 NWLKEAGFRDVSCIYKYYQFAVMFGR 224 (234)
T ss_dssp HHHHHTTCEEEEEEEEETTEEEEEEE
T ss_pred HHHHHcCCCceeeeeeecceeEEEEE
Confidence 99999999999998776655554443
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.80 E-value=1.4e-18 Score=141.21 Aligned_cols=168 Identities=14% Similarity=0.222 Sum_probs=120.0
Q ss_pred HHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCC-CCeEEeeCCCCC-CCC-ccceeee
Q 023625 103 VIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTN-DNLDFLGGNMFE-AIP-QANAVLL 178 (279)
Q Consensus 103 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~ri~~~~~d~~~-~~~-~~D~v~~ 178 (279)
+++.+. ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++.. .+++++.+|+.+ +.+ .||+|++
T Consensus 37 ~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 112 (220)
T 3hnr_A 37 ILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVS 112 (220)
T ss_dssp HHHHHH--HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEE
T ss_pred HHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEE
Confidence 444443 456789999999999999999997 678999999 88888887632 489999999987 444 6999999
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhh--hhhcCCeeCCHHHHHHHHH
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILM--VSLFRGKERSVDDWKKLFL 256 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~r~~~e~~~ll~ 256 (279)
..++|++++.+...+|++++++|+ |||.+++.+....................... .........+.++|.++++
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 189 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLN---KGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFE 189 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSC---TTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHH
T ss_pred CcchhcCChHHHHHHHHHHHHhcC---CCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHH
Confidence 999999999988789999999999 79999999866543211100000000000000 0000112348899999999
Q ss_pred HCCCceeEEEecCCceeEEEEe
Q 023625 257 AAGFSHYKITPMLGVRSLIEAY 278 (279)
Q Consensus 257 ~aGf~~~~~~~~~~~~~~i~~~ 278 (279)
++||+++.+. ..+...+++++
T Consensus 190 ~aGf~v~~~~-~~~~~w~~~~~ 210 (220)
T 3hnr_A 190 NNGFHVTFTR-LNHFVWVMEAT 210 (220)
T ss_dssp HTTEEEEEEE-CSSSEEEEEEE
T ss_pred HCCCEEEEee-ccceEEEEeeh
Confidence 9999866554 34666666654
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.79 E-value=3.1e-18 Score=138.71 Aligned_cols=153 Identities=18% Similarity=0.206 Sum_probs=111.1
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCC-CCeEEeeCCCCCCCC--ccceeeehhhhccCC
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTN-DNLDFLGGNMFEAIP--QANAVLLKWILHNWN 186 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~ri~~~~~d~~~~~~--~~D~v~~~~vlh~~~ 186 (279)
..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++.. .+++++.+|+.+..+ .||+|++..++|+++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCC
Confidence 456679999999999999999998 669999999 88998888643 689999999987433 599999999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcC------CeeCCHHHHHHHHHHCCC
Q 023625 187 DEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFR------GKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 187 ~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~r~~~e~~~ll~~aGf 260 (279)
+++...+|++++++|+ |||.+++.+...+...... .........+......+ ....+.++|.++++++||
T Consensus 122 ~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 197 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVA---PGGVVEFVDVTDHERRLEQ-QDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGW 197 (218)
T ss_dssp HHHHHHHHHHHHHHEE---EEEEEEEEEECCCC-------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHcC---CCeEEEEEeCCCCccccch-hhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCC
Confidence 9888999999999999 7999999987653221110 00000000000000011 123499999999999999
Q ss_pred ceeEEEecC
Q 023625 261 SHYKITPML 269 (279)
Q Consensus 261 ~~~~~~~~~ 269 (279)
++......+
T Consensus 198 ~v~~~~~~~ 206 (218)
T 3ou2_A 198 SCSVDEVHP 206 (218)
T ss_dssp EEEEEEEET
T ss_pred EEEeeeccc
Confidence 955444434
No 21
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.79 E-value=1.9e-19 Score=146.89 Aligned_cols=162 Identities=12% Similarity=0.120 Sum_probs=117.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-CCC--ccceeeehhhhc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-AIP--QANAVLLKWILH 183 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh 183 (279)
.+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|++..++|
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 4478999999999999999999877 8999999 888888774 23789999999987 544 599999999988
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCc--h-hhhhhhhcchhhh--------hhc--C-------C
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDK--E-SMETQLCFDILMV--------SLF--R-------G 243 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~--~-~~~~~~~~d~~~~--------~~~--~-------~ 243 (279)
.+..++..++|++++++|+ |||++++.+...+...... . ......+....+. ... + .
T Consensus 115 ~~~~~~~~~~l~~~~~~L~---~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLK---PSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRF 191 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEE---EEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEE
T ss_pred hCCHHHHHHHHHHHHHHcC---CCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeeh
Confidence 7788888899999999999 7999999876532210000 0 0000000000000 000 0 1
Q ss_pred eeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 244 KERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 244 ~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
..++ .++.++|+++||+.+++.++.....+|+++|
T Consensus 192 ~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 192 NVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp ECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred hhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 1122 4899999999999999999988888999887
No 22
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.78 E-value=2.1e-18 Score=144.05 Aligned_cols=163 Identities=17% Similarity=0.158 Sum_probs=117.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC-ccceeeehh-hhccCC
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP-QANAVLLKW-ILHNWN 186 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~-~~D~v~~~~-vlh~~~ 186 (279)
.++..+|||||||+|.++..+++.. .+++++|+ +.+++.+++...+++++.+|+.+ +.+ .||+|++.. ++|+++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSC
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcC
Confidence 3456899999999999999999885 47999999 89999888754689999999988 444 599999998 999986
Q ss_pred h-hHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhh--------------------hhhhhcchhhhhhcC---
Q 023625 187 D-EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESM--------------------ETQLCFDILMVSLFR--- 242 (279)
Q Consensus 187 ~-~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~--------------------~~~~~~d~~~~~~~~--- 242 (279)
+ ++..++|++++++|+ |||.+++.+...++........ ......++.+.....
T Consensus 126 ~~~~~~~~l~~~~~~L~---pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (263)
T 3pfg_A 126 GQAELDAALERFAAHVL---PDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRG 202 (263)
T ss_dssp HHHHHHHHHHHHHHTEE---EEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTE
T ss_pred CHHHHHHHHHHHHHhcC---CCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCc
Confidence 5 577899999999999 7999888654333321110000 000011111111111
Q ss_pred ---------CeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEe
Q 023625 243 ---------GKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAY 278 (279)
Q Consensus 243 ---------~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 278 (279)
.+.++.+||.++|+++||+++++....+...+++++
T Consensus 203 ~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~ 247 (263)
T 3pfg_A 203 ITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGL 247 (263)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEE
T ss_pred EEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEe
Confidence 223589999999999999999987776666666555
No 23
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.78 E-value=4.9e-18 Score=137.82 Aligned_cols=156 Identities=15% Similarity=0.179 Sum_probs=123.0
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-CCC-
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-AIP- 171 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~~~- 171 (279)
..+++.+. ..+..+|||||||+|.++..+++.. |..+++++|+ +.+++.+++. ..++++..+|+.+ +.+
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 34555554 5677899999999999999999997 7889999999 8888887641 2589999999987 544
Q ss_pred -ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHH
Q 023625 172 -QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDD 250 (279)
Q Consensus 172 -~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e 250 (279)
.||+|++..++|++++. ..+|+++.++|+ |||.+++.+..........+ ....++.++
T Consensus 105 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~----------------~~~~~~~~~ 163 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEP--LKFLEELKRVAK---PFAYLAIIDWKKEERDKGPP----------------PEEVYSEWE 163 (219)
T ss_dssp SCEEEEEEESCGGGCSSH--HHHHHHHHHHEE---EEEEEEEEEECSSCCSSSCC----------------GGGSCCHHH
T ss_pred CCeeEEEeehhhhhcCCH--HHHHHHHHHHhC---CCeEEEEEEecccccccCCc----------------hhcccCHHH
Confidence 49999999999999764 688999999999 79999998876554322210 012248899
Q ss_pred HHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 251 WKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 251 ~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
|.++++++||+++++...+.....+.+++
T Consensus 164 ~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 164 VGLILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp HHHHHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred HHHHHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 99999999999999988876665555553
No 24
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.78 E-value=3.9e-18 Score=142.29 Aligned_cols=156 Identities=13% Similarity=0.233 Sum_probs=121.3
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCC---CCeEEeeCCCCC-CCC--cc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTN---DNLDFLGGNMFE-AIP--QA 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~---~ri~~~~~d~~~-~~~--~~ 173 (279)
..+++.++ ..+..+|||||||+|.++..+++++ +.+++++|+ +.+++.+++.. ++++++.+|+.+ +.+ .|
T Consensus 45 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 121 (266)
T 3ujc_A 45 KKILSDIE--LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNF 121 (266)
T ss_dssp HHHTTTCC--CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCE
T ss_pred HHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcE
Confidence 33444443 5667899999999999999999987 679999999 88888887532 689999999987 554 59
Q ss_pred ceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHH
Q 023625 174 NAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKK 253 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ 253 (279)
|+|++..++|++++++...+|++++++|+ |||++++.+...+...... ..+.. .....+....+.+++.+
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~ 191 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLK---PTGTLLITDYCATEKENWD-----DEFKE--YVKQRKYTLITVEEYAD 191 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEEESCGGGCC-----HHHHH--HHHHHTCCCCCHHHHHH
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcC---CCCEEEEEEeccCCcccch-----HHHHH--HHhcCCCCCCCHHHHHH
Confidence 99999999999988888999999999999 7999999998766521110 00100 11112334568999999
Q ss_pred HHHHCCCceeEEEecC
Q 023625 254 LFLAAGFSHYKITPML 269 (279)
Q Consensus 254 ll~~aGf~~~~~~~~~ 269 (279)
+++++||+++++....
T Consensus 192 ~l~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 192 ILTACNFKNVVSKDLS 207 (266)
T ss_dssp HHHHTTCEEEEEEECH
T ss_pred HHHHcCCeEEEEEeCC
Confidence 9999999999887653
No 25
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.77 E-value=1.1e-17 Score=140.43 Aligned_cols=157 Identities=17% Similarity=0.176 Sum_probs=119.6
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC-
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP- 171 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~- 171 (279)
..+++.++ ..+..+|||||||+|.++..+++++ ..+++++|+ +.+++.+++ ..++++++.+|+.+ +.+
T Consensus 51 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 51 DEMIALLD--VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHSC--CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 34555554 5677899999999999999999987 679999999 888887763 34689999999987 554
Q ss_pred -ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHH
Q 023625 172 -QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDD 250 (279)
Q Consensus 172 -~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e 250 (279)
.||+|++..++|++++. ..+|++++++|+ |||++++.+......... . .....+............+.++
T Consensus 128 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~---pgG~l~i~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~ 198 (273)
T 3bus_A 128 ASFDAVWALESLHHMPDR--GRALREMARVLR---PGGTVAIADFVLLAPVEG-A---KKEAVDAFRAGGGVLSLGGIDE 198 (273)
T ss_dssp TCEEEEEEESCTTTSSCH--HHHHHHHHTTEE---EEEEEEEEEEEESSCCCH-H---HHHHHHHHHHHHTCCCCCCHHH
T ss_pred CCccEEEEechhhhCCCH--HHHHHHHHHHcC---CCeEEEEEEeeccCCCCh-h---HHHHHHHHHhhcCccCCCCHHH
Confidence 59999999999999775 588999999999 799999999876543221 0 0111111111122456679999
Q ss_pred HHHHHHHCCCceeEEEecC
Q 023625 251 WKKLFLAAGFSHYKITPML 269 (279)
Q Consensus 251 ~~~ll~~aGf~~~~~~~~~ 269 (279)
+.++++++||+++++...+
T Consensus 199 ~~~~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 199 YESDVRQAELVVTSTVDIS 217 (273)
T ss_dssp HHHHHHHTTCEEEEEEECH
T ss_pred HHHHHHHcCCeEEEEEECc
Confidence 9999999999998887653
No 26
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.77 E-value=7.4e-19 Score=142.33 Aligned_cols=157 Identities=17% Similarity=0.232 Sum_probs=114.2
Q ss_pred CEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC--ccceeeehhhhcc
Q 023625 115 KSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP--QANAVLLKWILHN 184 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~ 184 (279)
.+|||||||+|.++..++++ |..+++++|+ +.+++.++. ..++++++.+|+.+ +.+ .||+|++..++|+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 39999999999999999998 8889999999 888888774 24689999999988 554 5999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhh--hhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCce
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESME--TQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSH 262 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~ 262 (279)
+++ ...+|++++++|+ |||.+++.+...+..... .... .................++.++|.++|+++||+.
T Consensus 124 ~~~--~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 197 (219)
T 3dlc_A 124 WED--VATAFREIYRILK---SGGKTYIGGGFGNKELRD-SISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISS 197 (219)
T ss_dssp CSC--HHHHHHHHHHHEE---EEEEEEEEECCSSHHHHH-HHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSS
T ss_pred ccC--HHHHHHHHHHhCC---CCCEEEEEeccCcHHHHH-HHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCe
Confidence 965 4589999999999 799999987543321100 0000 0000000000001133447899999999999999
Q ss_pred eEEEecCCceeEEEEe
Q 023625 263 YKITPMLGVRSLIEAY 278 (279)
Q Consensus 263 ~~~~~~~~~~~~i~~~ 278 (279)
+++........++..+
T Consensus 198 v~~~~~~~~~~~~~~k 213 (219)
T 3dlc_A 198 YEIILGDEGFWIIISK 213 (219)
T ss_dssp EEEEEETTEEEEEEBC
T ss_pred EEEEecCCceEEEEec
Confidence 9998777666655443
No 27
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.76 E-value=7.3e-18 Score=138.47 Aligned_cols=163 Identities=17% Similarity=0.167 Sum_probs=117.6
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC-ccceee-ehhhhccCCh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP-QANAVL-LKWILHNWND 187 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~-~~D~v~-~~~vlh~~~~ 187 (279)
.+..+|||||||+|.++..+++.++ +++++|+ +.+++.+++...+++++.+|+.+ +.+ .||+|+ +..++|++++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCC
Confidence 4678999999999999999999976 8999999 89999888654789999999987 444 599999 4558888754
Q ss_pred -hHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhh--------------------hhhhcchhhhhhc-CC--
Q 023625 188 -EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESME--------------------TQLCFDILMVSLF-RG-- 243 (279)
Q Consensus 188 -~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~--------------------~~~~~d~~~~~~~-~~-- 243 (279)
++..++|++++++|+ |||.+++.+...++......... ......+.++... ++
T Consensus 117 ~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (239)
T 3bxo_A 117 TEELGAAVASFAEHLE---PGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGV 193 (239)
T ss_dssp HHHHHHHHHHHHHTEE---EEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEE
T ss_pred HHHHHHHHHHHHHhcC---CCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcc
Confidence 678899999999999 79999887655443321100000 0000111111111 11
Q ss_pred ---------eeCCHHHHHHHHHHCCCceeEEEecCCceeEEEEeC
Q 023625 244 ---------KERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEAYP 279 (279)
Q Consensus 244 ---------~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 279 (279)
+.++.++|+++|+++||++..+....+...+++++|
T Consensus 194 ~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 194 RHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred eEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 345899999999999998777766556667777764
No 28
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.76 E-value=3.5e-18 Score=141.76 Aligned_cols=149 Identities=17% Similarity=0.264 Sum_probs=116.5
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-CCC--ccc
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-AIP--QAN 174 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~~~--~~D 174 (279)
.+++.++ ..+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .||
T Consensus 84 ~~l~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD 160 (254)
T 1xtp_A 84 NFIASLP--GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYD 160 (254)
T ss_dssp HHHHTST--TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEE
T ss_pred HHHHhhc--ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeE
Confidence 3444443 4567899999999999999999886 557999999 8888888752 1579999999977 444 599
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHH
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKL 254 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~l 254 (279)
+|++..++|++++++..++|++++++|+ |||.+++.+........ ..+. ......++.++|.++
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~---------~~~~----~~~~~~~~~~~~~~~ 224 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQQALT---PNGYIFFKENCSTGDRF---------LVDK----EDSSLTRSDIHYKRL 224 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEBC--CCE---------EEET----TTTEEEBCHHHHHHH
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcC---CCeEEEEEecCCCcccc---------eecc----cCCcccCCHHHHHHH
Confidence 9999999999998888999999999999 79999998865433210 1110 112345699999999
Q ss_pred HHHCCCceeEEEecC
Q 023625 255 FLAAGFSHYKITPML 269 (279)
Q Consensus 255 l~~aGf~~~~~~~~~ 269 (279)
|+++||+++++....
T Consensus 225 l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 225 FNESGVRVVKEAFQE 239 (254)
T ss_dssp HHHHTCCEEEEEECT
T ss_pred HHHCCCEEEEeeecC
Confidence 999999999887654
No 29
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.75 E-value=2.7e-17 Score=138.16 Aligned_cols=141 Identities=16% Similarity=0.296 Sum_probs=110.8
Q ss_pred CCCEEEEecCCc---cHHHHHHHHHCCCCeEEEeeC-hhHHhhccc---CCCCeEEeeCCCCCC------------C--C
Q 023625 113 GLKSLVDVAGGT---GIMARAIATAFPDIKCTVFDL-PHVVDNLQG---TNDNLDFLGGNMFEA------------I--P 171 (279)
Q Consensus 113 ~~~~vlDvG~G~---G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~ri~~~~~d~~~~------------~--~ 171 (279)
+..+|||||||+ |.++..+.+.+|+.+++++|+ |.+++.+++ ..++++++.+|+.++ + .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 999888888899999999999 999998875 236899999999752 1 3
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHH
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDW 251 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~ 251 (279)
.+|+|++..+||++++++...+|++++++|+ |||.+++.+...+. .. . . ....+...........|+.+|+
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~---pGG~l~i~~~~~~~--~~-~--~-~~~~~~~~~~~~~~~~~s~~ei 227 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALA---PGSYLFMTSLVDTG--LP-A--Q-QKLARITRENLGEGWARTPEEI 227 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSC---TTCEEEEEEEBCSS--CH-H--H-HHHHHHHHHHHSCCCCBCHHHH
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCC---CCcEEEEEEecCcc--hH-H--H-HHHHHHHHhcCCCCccCCHHHH
Confidence 5899999999999999888999999999999 79999999876532 11 1 1 1122222222224567899999
Q ss_pred HHHHHHCCCceeE
Q 023625 252 KKLFLAAGFSHYK 264 (279)
Q Consensus 252 ~~ll~~aGf~~~~ 264 (279)
.++| +||++++
T Consensus 228 ~~~l--~G~~l~~ 238 (274)
T 2qe6_A 228 ERQF--GDFELVE 238 (274)
T ss_dssp HHTT--TTCEECT
T ss_pred HHHh--CCCeEcc
Confidence 9999 5998765
No 30
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.75 E-value=2.8e-17 Score=139.62 Aligned_cols=145 Identities=16% Similarity=0.220 Sum_probs=113.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC--ccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP--QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~--~~D~v~~~~ 180 (279)
+.+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ ..++++++.+|+.+ +.+ .||+|++..
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 4677899999999999999999986 469999999 888887764 34689999999988 654 499999999
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
++|++++ ...+|++++++|+ |||++++.+.......... ......... ......+.++|.++++++||
T Consensus 159 ~l~~~~~--~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~l~~aGf 226 (297)
T 2o57_A 159 AFLHSPD--KLKVFQECARVLK---PRGVMAITDPMKEDGIDKS---SIQPILDRI----KLHDMGSLGLYRSLAKECGL 226 (297)
T ss_dssp CGGGCSC--HHHHHHHHHHHEE---EEEEEEEEEEEECTTCCGG---GGHHHHHHH----TCSSCCCHHHHHHHHHHTTE
T ss_pred hhhhcCC--HHHHHHHHHHHcC---CCeEEEEEEeccCCCCchH---HHHHHHHHh----cCCCCCCHHHHHHHHHHCCC
Confidence 9999988 4689999999999 7999999998766543221 001111111 11234589999999999999
Q ss_pred ceeEEEec
Q 023625 261 SHYKITPM 268 (279)
Q Consensus 261 ~~~~~~~~ 268 (279)
+++++...
T Consensus 227 ~~~~~~~~ 234 (297)
T 2o57_A 227 VTLRTFSR 234 (297)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 99988765
No 31
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.75 E-value=4.1e-17 Score=139.67 Aligned_cols=155 Identities=12% Similarity=0.058 Sum_probs=117.2
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC-
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP- 171 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~- 171 (279)
..+++.++ .+.+..+|||||||+|.++..+++++ ..+++++|+ +.+++.|++ ..++++++.+|+.+ +.+
T Consensus 106 ~~l~~~l~-~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 183 (312)
T 3vc1_A 106 EFLMDHLG-QAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDK 183 (312)
T ss_dssp HHHHTTSC-CCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT
T ss_pred HHHHHHhc-cCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCC
Confidence 44555443 24567899999999999999999986 578999999 888888774 34589999999987 554
Q ss_pred -ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHH
Q 023625 172 -QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDD 250 (279)
Q Consensus 172 -~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e 250 (279)
.||+|++..++|+++ ..++|+++.++|+ |||++++.+........... ......+-.. ....++.++
T Consensus 184 ~~fD~V~~~~~l~~~~---~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~s~~~ 251 (312)
T 3vc1_A 184 GAVTASWNNESTMYVD---LHDLFSEHSRFLK---VGGRYVTITGCWNPRYGQPS--KWVSQINAHF----ECNIHSRRE 251 (312)
T ss_dssp TCEEEEEEESCGGGSC---HHHHHHHHHHHEE---EEEEEEEEEEEECTTTCSCC--HHHHHHHHHH----TCCCCBHHH
T ss_pred CCEeEEEECCchhhCC---HHHHHHHHHHHcC---CCcEEEEEEccccccccchh--HHHHHHHhhh----cCCCCCHHH
Confidence 599999999999984 5789999999999 79999999987765432210 0000111111 123568999
Q ss_pred HHHHHHHCCCceeEEEecC
Q 023625 251 WKKLFLAAGFSHYKITPML 269 (279)
Q Consensus 251 ~~~ll~~aGf~~~~~~~~~ 269 (279)
|.++++++||+++++...+
T Consensus 252 ~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 252 YLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp HHHHHHTTTEEEEEEEECH
T ss_pred HHHHHHHCCCEEEEEEeCC
Confidence 9999999999999887653
No 32
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.75 E-value=4.5e-17 Score=134.15 Aligned_cols=141 Identities=16% Similarity=0.274 Sum_probs=110.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC---CCC--ccceeeehhhhcc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE---AIP--QANAVLLKWILHN 184 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~---~~~--~~D~v~~~~vlh~ 184 (279)
+.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. ++++.+|+.+ +.+ .||+|++..++|+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~ 113 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEH 113 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGG
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhh
Confidence 456789999999999999999998 557999999 8888888754 8899999865 444 5999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeE
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYK 264 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~ 264 (279)
+++++...+|++++++|+ |||.+++....... . . ...+.. .........+.+++.++++++||++++
T Consensus 114 ~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~---~--~----~~~~~~-~~~~~~~~~~~~~l~~~l~~aGf~~~~ 180 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMK---YSSYIVIESPNPTS---L--Y----SLINFY-IDPTHKKPVHPETLKFILEYLGFRDVK 180 (240)
T ss_dssp SCGGGHHHHHHHHHHHBC---TTCCEEEEEECTTS---H--H----HHHHHT-TSTTCCSCCCHHHHHHHHHHHTCEEEE
T ss_pred CCcHHHHHHHHHHHHHcC---CCcEEEEEeCCcch---h--H----HHHHHh-cCccccccCCHHHHHHHHHHCCCeEEE
Confidence 999888999999999999 79999987653211 0 0 011111 111123456889999999999999988
Q ss_pred EEecC
Q 023625 265 ITPML 269 (279)
Q Consensus 265 ~~~~~ 269 (279)
+....
T Consensus 181 ~~~~~ 185 (240)
T 3dli_A 181 IEFFE 185 (240)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 87654
No 33
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.75 E-value=6.6e-18 Score=140.76 Aligned_cols=153 Identities=16% Similarity=0.362 Sum_probs=115.1
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-CCC--
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-AIP-- 171 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~~~-- 171 (279)
..+++.++ ..+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++. .++++++.+|+.+ +.+
T Consensus 27 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~ 102 (260)
T 1vl5_A 27 AKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDE 102 (260)
T ss_dssp HHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTT
T ss_pred HHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCC
Confidence 44555554 45778999999999999999999875 8999999 8888887641 2579999999987 655
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhh-hh-hcCCeeCCHH
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILM-VS-LFRGKERSVD 249 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~~r~~~ 249 (279)
.||+|++..++|++++. ..+|++++++|+ |||++++.+...+... . ...+..... +. ......++.+
T Consensus 103 ~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lk---pgG~l~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~ 171 (260)
T 1vl5_A 103 RFHIVTCRIAAHHFPNP--ASFVSEAYRVLK---KGGQLLLVDNSAPEND----A--FDVFYNYVEKERDYSHHRAWKKS 171 (260)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHHEE---EEEEEEEEEEEBCSSH----H--HHHHHHHHHHHHCTTCCCCCBHH
T ss_pred CEEEEEEhhhhHhcCCH--HHHHHHHHHHcC---CCCEEEEEEcCCCCCH----H--HHHHHHHHHHhcCccccCCCCHH
Confidence 59999999999999875 488999999999 7999999987765431 1 011111111 11 1123556899
Q ss_pred HHHHHHHHCCCceeEEEec
Q 023625 250 DWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 250 e~~~ll~~aGf~~~~~~~~ 268 (279)
+|.++|+++||+++++...
T Consensus 172 ~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 172 DWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp HHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEEe
Confidence 9999999999998877654
No 34
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=8.3e-18 Score=134.87 Aligned_cols=139 Identities=14% Similarity=0.163 Sum_probs=113.1
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC--ccceeeehhhhccCChhH
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP--QANAVLLKWILHNWNDEE 189 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~~~~~~ 189 (279)
..+|||||||+|.++..+++. +.+++++|+ +.+++.+++...+++++.+|+.+ +.+ .||+|++..++|++++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 789999999999999999998 568999999 88999888755789999999987 543 599999999999999888
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecC
Q 023625 190 SVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPML 269 (279)
Q Consensus 190 ~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~ 269 (279)
..++|++++++|+ |||.+++.....+.... +.. .......++.++|.++++++||+++++...+
T Consensus 120 ~~~~l~~~~~~L~---pgG~l~i~~~~~~~~~~---------~~~----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 120 LPDALVALRMAVE---DGGGLLMSFFSGPSLEP---------MYH----PVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp HHHHHHHHHHTEE---EEEEEEEEEECCSSCEE---------ECC----SSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHcC---CCcEEEEEEccCCchhh---------hhc----hhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 8999999999999 79999988754433110 000 0112345689999999999999999998765
Q ss_pred C
Q 023625 270 G 270 (279)
Q Consensus 270 ~ 270 (279)
.
T Consensus 184 ~ 184 (203)
T 3h2b_A 184 R 184 (203)
T ss_dssp T
T ss_pred C
Confidence 4
No 35
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.74 E-value=2.9e-17 Score=136.38 Aligned_cols=152 Identities=11% Similarity=0.090 Sum_probs=114.9
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC-c
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP-Q 172 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~ 172 (279)
.+++.+. ..+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ ..++++++.+|+.+ +.. .
T Consensus 27 ~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 103 (256)
T 1nkv_A 27 TLGRVLR--MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEK 103 (256)
T ss_dssp HHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSC
T ss_pred HHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCC
Confidence 3444443 5677899999999999999999987 678999999 888888763 23689999999987 433 5
Q ss_pred cceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHH
Q 023625 173 ANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWK 252 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~ 252 (279)
||+|++..++|++++. .++|++++++|+ |||++++.+............ ...+. ........+.++|.
T Consensus 104 fD~V~~~~~~~~~~~~--~~~l~~~~r~Lk---pgG~l~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~ 171 (256)
T 1nkv_A 104 CDVAACVGATWIAGGF--AGAEELLAQSLK---PGGIMLIGEPYWRQLPATEEI--AQACG-----VSSTSDFLTLPGLV 171 (256)
T ss_dssp EEEEEEESCGGGTSSS--HHHHHHHTTSEE---EEEEEEEEEEEETTCCSSHHH--HHTTT-----CSCGGGSCCHHHHH
T ss_pred CCEEEECCChHhcCCH--HHHHHHHHHHcC---CCeEEEEecCcccCCCChHHH--HHHHh-----cccccccCCHHHHH
Confidence 9999999999998764 688999999999 799999999876544322100 00000 00112445899999
Q ss_pred HHHHHCCCceeEEEec
Q 023625 253 KLFLAAGFSHYKITPM 268 (279)
Q Consensus 253 ~ll~~aGf~~~~~~~~ 268 (279)
++++++||+++++...
T Consensus 172 ~~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 172 GAFDDLGYDVVEMVLA 187 (256)
T ss_dssp HHHHTTTBCCCEEEEC
T ss_pred HHHHHCCCeeEEEEeC
Confidence 9999999998877543
No 36
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.74 E-value=3.4e-17 Score=138.40 Aligned_cols=161 Identities=10% Similarity=0.131 Sum_probs=118.7
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCCCccc
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAIPQAN 174 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~~~~D 174 (279)
.+++.++ ..+..+|||||||+|.++..++++++ .+++++|+ +.+++.+++ ..+++++..+|+.+-...||
T Consensus 55 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD 131 (287)
T 1kpg_A 55 LALGKLG--LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVD 131 (287)
T ss_dssp HHHTTTT--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCS
T ss_pred HHHHHcC--CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCee
Confidence 3444444 56678999999999999999997765 49999999 888887764 23689999999965225699
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCC----Cchhh-hhhhhcchhhh-hhcCCeeCCH
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQ----DKESM-ETQLCFDILMV-SLFRGKERSV 248 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~----~~~~~-~~~~~~d~~~~-~~~~~~~r~~ 248 (279)
+|++..++|++++++...+|++++++|+ |||++++.+...+.... ..+.. ......+.... ...++...+.
T Consensus 132 ~v~~~~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 208 (287)
T 1kpg_A 132 RIVSIGAFEHFGHERYDAFFSLAHRLLP---ADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSI 208 (287)
T ss_dssp EEEEESCGGGTCTTTHHHHHHHHHHHSC---TTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCH
T ss_pred EEEEeCchhhcChHHHHHHHHHHHHhcC---CCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCH
Confidence 9999999999987778899999999999 79999999887654211 00000 00001111111 1124566699
Q ss_pred HHHHHHHHHCCCceeEEEec
Q 023625 249 DDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 249 ~e~~~ll~~aGf~~~~~~~~ 268 (279)
+++.++++++||+++++...
T Consensus 209 ~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 209 PMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp HHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHhCCcEEEEEEeC
Confidence 99999999999999988765
No 37
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.74 E-value=1.3e-17 Score=142.33 Aligned_cols=165 Identities=12% Similarity=0.105 Sum_probs=117.2
Q ss_pred hCCCCEEEEecCCccHHHHHHH-HHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC-ccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIA-TAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP-QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~~D~v~~~~ 180 (279)
+.+..+|||||||+|.++..++ ..+|+.+++++|+ +.+++.+++ ..++++++.+|+.+ +.+ .||+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 5678899999999999999996 6788999999999 888888774 23569999999987 444 599999999
Q ss_pred hhccCChh-HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCch-hh--hh-h---hhcchhhhhhcC---CeeCCHH
Q 023625 181 ILHNWNDE-ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKE-SM--ET-Q---LCFDILMVSLFR---GKERSVD 249 (279)
Q Consensus 181 vlh~~~~~-~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~-~~--~~-~---~~~d~~~~~~~~---~~~r~~~ 249 (279)
++|++++. ...++|++++++|+ |||++++.+...+....... +. .. . ......+..... ...++.+
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALK---PGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEE---EEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcC---CCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 99998654 44579999999999 79999998765543221100 00 00 0 000000111111 1336999
Q ss_pred HHHHHHHHCCCceeEEEecC-CceeEEEEe
Q 023625 250 DWKKLFLAAGFSHYKITPML-GVRSLIEAY 278 (279)
Q Consensus 250 e~~~ll~~aGf~~~~~~~~~-~~~~~i~~~ 278 (279)
++.++++++||+++++.... +....+.++
T Consensus 273 ~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~ 302 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDDRARLFPTVIAR 302 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTSSSCEEEEE
T ss_pred HHHHHHHHCCCEEEEEEcccCceeeEEEEe
Confidence 99999999999999988654 333334444
No 38
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.73 E-value=5e-17 Score=135.03 Aligned_cols=144 Identities=14% Similarity=0.143 Sum_probs=112.3
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC--ccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP--QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~--~~D~v~~~~ 180 (279)
+.+..+|||||||+|.++..+++.++. +++++|+ +.+++.+++ ..++++++.+|+.+ +.+ .||+|++..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 456789999999999999999999986 9999999 888887763 34679999999977 544 599999999
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
++|+++ ..++|++++++|+ |||++++.+........... ..+... .......+.++|.++++++||
T Consensus 123 ~l~~~~---~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~l~~aGf 188 (257)
T 3f4k_A 123 AIYNIG---FERGMNEWSKYLK---KGGFIAVSEASWFTSERPAE------IEDFWM--DAYPEISVIPTCIDKMERAGY 188 (257)
T ss_dssp CSCCCC---HHHHHHHHHTTEE---EEEEEEEEEEEESSSCCCHH------HHHHHH--HHCTTCCBHHHHHHHHHHTTE
T ss_pred hHhhcC---HHHHHHHHHHHcC---CCcEEEEEEeeccCCCChHH------HHHHHH--HhCCCCCCHHHHHHHHHHCCC
Confidence 999883 3578999999999 79999999976554332210 111110 111224589999999999999
Q ss_pred ceeEEEecC
Q 023625 261 SHYKITPML 269 (279)
Q Consensus 261 ~~~~~~~~~ 269 (279)
+++++...+
T Consensus 189 ~~v~~~~~~ 197 (257)
T 3f4k_A 189 TPTAHFILP 197 (257)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEECC
Confidence 999887665
No 39
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.73 E-value=5e-17 Score=138.50 Aligned_cols=162 Identities=12% Similarity=0.156 Sum_probs=120.3
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCCCccc
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAIPQAN 174 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~~~~D 174 (279)
.+++.+. ..+..+|||||||+|.++..++++++ .+++++|+ +.+++.+++ ..++++++.+|+.+....||
T Consensus 63 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD 139 (302)
T 3hem_A 63 LALDKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVD 139 (302)
T ss_dssp HHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCS
T ss_pred HHHHHcC--CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCcc
Confidence 3455444 56778999999999999999999987 79999999 888888764 34589999999976533699
Q ss_pred eeeehhhhccCCh-------hHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhh-----hhhhcchhhh-hhc
Q 023625 175 AVLLKWILHNWND-------EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESME-----TQLCFDILMV-SLF 241 (279)
Q Consensus 175 ~v~~~~vlh~~~~-------~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~-----~~~~~d~~~~-~~~ 241 (279)
+|++..++|++++ ++...+|+++.++|+ |||++++.+...++......... ...+.+.... ...
T Consensus 140 ~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 216 (302)
T 3hem_A 140 RIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTP---DDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFP 216 (302)
T ss_dssp EEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSC---TTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCT
T ss_pred EEEEcchHHhcCccccccchhHHHHHHHHHHHhcC---CCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCC
Confidence 9999999999944 667899999999999 79999998887654311100000 0000011111 122
Q ss_pred CCeeCCHHHHHHHHHHCCCceeEEEecC
Q 023625 242 RGKERSVDDWKKLFLAAGFSHYKITPML 269 (279)
Q Consensus 242 ~~~~r~~~e~~~ll~~aGf~~~~~~~~~ 269 (279)
++...+.+++.++++++||+++++...+
T Consensus 217 ~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 217 GGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp TCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred CCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 4567799999999999999999887664
No 40
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.72 E-value=4.9e-17 Score=136.03 Aligned_cols=144 Identities=13% Similarity=0.125 Sum_probs=113.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC--ccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP--QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~--~~D~v~~~~ 180 (279)
+.+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ ..++++++.+|+.+ +.+ .||+|++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 456789999999999999999998 8889999999 888887764 34689999999987 544 599999999
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
++|+++ ...+|++++++|+ |||++++.+........... ..+... .......+.+++.++++++||
T Consensus 123 ~~~~~~---~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~l~~aGf 188 (267)
T 3kkz_A 123 AIYNIG---FERGLNEWRKYLK---KGGYLAVSECSWFTDERPAE------INDFWM--DAYPEIDTIPNQVAKIHKAGY 188 (267)
T ss_dssp CGGGTC---HHHHHHHHGGGEE---EEEEEEEEEEEESSSCCCHH------HHHHHH--HHCTTCEEHHHHHHHHHHTTE
T ss_pred CceecC---HHHHHHHHHHHcC---CCCEEEEEEeeecCCCChHH------HHHHHH--HhCCCCCCHHHHHHHHHHCCC
Confidence 999983 3578999999999 79999999987654432211 111110 011234588999999999999
Q ss_pred ceeEEEecC
Q 023625 261 SHYKITPML 269 (279)
Q Consensus 261 ~~~~~~~~~ 269 (279)
+++++..++
T Consensus 189 ~~v~~~~~~ 197 (267)
T 3kkz_A 189 LPVATFILP 197 (267)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 999888765
No 41
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.72 E-value=2.3e-17 Score=135.45 Aligned_cols=133 Identities=15% Similarity=0.208 Sum_probs=108.7
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC------CCCeEEeeCCCCCCCC--ccceeeehhhhcc
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT------NDNLDFLGGNMFEAIP--QANAVLLKWILHN 184 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~ri~~~~~d~~~~~~--~~D~v~~~~vlh~ 184 (279)
..+|||||||+|.++..+++ +..+++++|+ +.+++.+++. ..+++++.+|+.+..+ .||+|++..++|+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 45999999999999999976 5778999999 8888887742 2469999999988323 5999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeE
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYK 264 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~ 264 (279)
+++++..++|++++++|+ |||++++.+.........++ ...+.++|.++|+++||++++
T Consensus 145 ~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLK---PDGELITLMYPITDHVGGPP------------------YKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp SCGGGHHHHHHHHHHHEE---EEEEEEEEECCCSCCCSCSS------------------CCCCHHHHHHHHGGGTEEEEE
T ss_pred CCHHHHHHHHHHHHHHCC---CCcEEEEEEecccccCCCCC------------------ccCCHHHHHHHHHHcCCeEEE
Confidence 998888999999999999 79999988765443222210 114889999999999999998
Q ss_pred EEecC
Q 023625 265 ITPML 269 (279)
Q Consensus 265 ~~~~~ 269 (279)
+...+
T Consensus 204 ~~~~~ 208 (235)
T 3lcc_A 204 VEENP 208 (235)
T ss_dssp EEECT
T ss_pred EEecC
Confidence 87654
No 42
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.72 E-value=6.8e-17 Score=142.15 Aligned_cols=145 Identities=17% Similarity=0.286 Sum_probs=113.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccC---------C----CCeEEeeCCCCC-------C
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQGT---------N----DNLDFLGGNMFE-------A 169 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~---------~----~ri~~~~~d~~~-------~ 169 (279)
.+..+|||||||+|.++..+++.+ |..+++++|+ +.+++.+++. + .+++|+.+|+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 467899999999999999999987 7889999999 8888888753 1 689999999976 4
Q ss_pred CC--ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCC
Q 023625 170 IP--QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERS 247 (279)
Q Consensus 170 ~~--~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~ 247 (279)
.+ .||+|++..++|++++. ..+|++++++|+ |||++++.+...+..... ....+...+....+..++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lk---pgG~l~i~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 230 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNK--LALFKEIHRVLR---DGGELYFSDVYADRRLSE------AAQQDPILYGECLGGALY 230 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEE---EEEEEEEEEEEESSCCCH------HHHHCHHHHHTTCTTCCB
T ss_pred CCCCCEEEEEEccchhcCCCH--HHHHHHHHHHcC---CCCEEEEEEeccccccCH------hHhhhHHHhhcccccCCC
Confidence 43 59999999999998774 589999999999 799999998776543222 111112222222345568
Q ss_pred HHHHHHHHHHCCCceeEEEe
Q 023625 248 VDDWKKLFLAAGFSHYKITP 267 (279)
Q Consensus 248 ~~e~~~ll~~aGf~~~~~~~ 267 (279)
.++|.++|+++||+.+++..
T Consensus 231 ~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 231 LEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEe
Confidence 89999999999999886653
No 43
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.72 E-value=1.4e-16 Score=131.15 Aligned_cols=144 Identities=14% Similarity=0.186 Sum_probs=110.2
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC--CCCeEEeeCCCCC-CCC--ccceeeehhhhcc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT--NDNLDFLGGNMFE-AIP--QANAVLLKWILHN 184 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~ 184 (279)
.++..+|||||||+|.++..+++. +.+++++|+ +.+++.++.. ..+++++.+|+.+ +.+ .||+|++.+++|+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 456789999999999999999998 568999999 8888888763 5789999999987 544 5999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeE
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYK 264 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~ 264 (279)
+++. ..+|++++++|+ |||.+++.+......... . .+............++.+++.++++++||++++
T Consensus 129 ~~~~--~~~l~~~~~~L~---pgG~l~i~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 129 TEEP--LRALNEIKRVLK---SDGYACIAILGPTAKPRE------N-SYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp SSCH--HHHHHHHHHHEE---EEEEEEEEEECTTCGGGG------G-GGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred ccCH--HHHHHHHHHHhC---CCeEEEEEEcCCcchhhh------h-hhhhhccccccccCCCHHHHHHHHHHcCCEEEE
Confidence 8765 588999999999 799999887543221110 0 111111111123456899999999999999998
Q ss_pred EEec
Q 023625 265 ITPM 268 (279)
Q Consensus 265 ~~~~ 268 (279)
...+
T Consensus 197 ~~~~ 200 (242)
T 3l8d_A 197 GIGV 200 (242)
T ss_dssp EEEE
T ss_pred eecc
Confidence 7643
No 44
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.72 E-value=2.8e-17 Score=138.13 Aligned_cols=153 Identities=18% Similarity=0.323 Sum_probs=114.3
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC-CCC--ccceeeehhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE-AIP--QANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~-~~~--~~D~v~~~~v 181 (279)
+.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ..+++++..+|+.+ +.+ .||+|++..+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 46788999999999999999999999999999999 888887764 12579999999987 443 5999999999
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCch-hhhhhhhcch-hhhhhcCCeeCCHHHHHHHHHHCC
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKE-SMETQLCFDI-LMVSLFRGKERSVDDWKKLFLAAG 259 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~-~~~~~~~~d~-~~~~~~~~~~r~~~e~~~ll~~aG 259 (279)
+|++++.. .+|++++++|+ |||.+++.+.........+. ......+..+ ......++..++..++.++|+++|
T Consensus 115 l~~~~~~~--~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG 189 (276)
T 3mgg_A 115 LEHLQSPE--EALKSLKKVLK---PGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESG 189 (276)
T ss_dssp GGGCSCHH--HHHHHHHHHEE---EEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTT
T ss_pred hhhcCCHH--HHHHHHHHHcC---CCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCC
Confidence 99998864 88999999999 79999998864422110000 0000111111 111223455567789999999999
Q ss_pred CceeEEEec
Q 023625 260 FSHYKITPM 268 (279)
Q Consensus 260 f~~~~~~~~ 268 (279)
|+++++...
T Consensus 190 f~~v~~~~~ 198 (276)
T 3mgg_A 190 FEKIRVEPR 198 (276)
T ss_dssp CEEEEEEEE
T ss_pred CCeEEEeeE
Confidence 999888654
No 45
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.72 E-value=2e-17 Score=128.93 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=112.8
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCCccceeeehhhhccCChh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIPQANAVLLKWILHNWNDE 188 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~~~D~v~~~~vlh~~~~~ 188 (279)
..+..+|||||||+|.++..+++... +++++|+ +.+++.+++..+++++..+| .. +...||+|++..++|++++.
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d-~~~~~~~~D~v~~~~~l~~~~~~ 91 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP-KEIPDNSVDFILFANSFHDMDDK 91 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG-GGSCTTCEEEEEEESCSTTCSCH
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC-CCCCCCceEEEEEccchhcccCH
Confidence 56778999999999999999999873 8999999 88888887645799999999 32 22359999999999998764
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEec
Q 023625 189 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 189 ~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
..+|++++++|+ |||++++.+.........++. ...++.++|.++++ ||+++++...
T Consensus 92 --~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 92 --QHVISEVKRILK---DDGRVIIIDWRKENTGIGPPL----------------SIRMDEKDYMGWFS--NFVVEKRFNP 148 (170)
T ss_dssp --HHHHHHHHHHEE---EEEEEEEEEECSSCCSSSSCG----------------GGCCCHHHHHHHTT--TEEEEEEECS
T ss_pred --HHHHHHHHHhcC---CCCEEEEEEcCccccccCchH----------------hhhcCHHHHHHHHh--CcEEEEccCC
Confidence 588999999999 799999998765543322110 12258999999999 9999999988
Q ss_pred CCceeEEEEe
Q 023625 269 LGVRSLIEAY 278 (279)
Q Consensus 269 ~~~~~~i~~~ 278 (279)
+.....+.++
T Consensus 149 ~~~~~~l~~~ 158 (170)
T 3i9f_A 149 TPYHFGLVLK 158 (170)
T ss_dssp STTEEEEEEE
T ss_pred CCceEEEEEe
Confidence 7665544443
No 46
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.71 E-value=1.2e-16 Score=129.55 Aligned_cols=144 Identities=11% Similarity=0.063 Sum_probs=104.5
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC------C----CCeEEeeCCCCC-CC--Cccceee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT------N----DNLDFLGGNMFE-AI--PQANAVL 177 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~----~ri~~~~~d~~~-~~--~~~D~v~ 177 (279)
.+..+|||||||+|.++..+++..|..+++++|+ +.+++.+++. . .+++++.+|+.. +. ..||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4578999999999999999999999899999999 8888888742 1 289999999965 33 2599999
Q ss_pred ehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHH----H
Q 023625 178 LKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWK----K 253 (279)
Q Consensus 178 ~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~----~ 253 (279)
+..++|++++++..++|++++++|+ |||.+++... ........ ......+........++.+++. +
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lk---pgG~~i~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTR---PQTVIVSTPN-KEYNFHYG------NLFEGNLRHRDHRFEWTRKEFQTWAVK 177 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTC---CSEEEEEEEB-GGGGGCCC------CT-----GGGCCTTSBCHHHHHHHHHH
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhC---CCEEEEEccc-hhhhhhhc------ccCcccccccCceeeecHHHHHHHHHH
Confidence 9999999999888999999999999 7885544332 21110000 0000001111123345888988 8
Q ss_pred HHHHCCCceeEE
Q 023625 254 LFLAAGFSHYKI 265 (279)
Q Consensus 254 ll~~aGf~~~~~ 265 (279)
+++++||++...
T Consensus 178 l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 178 VAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHTEEEEEE
T ss_pred HHHHCCcEEEEE
Confidence 889999976544
No 47
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.71 E-value=4e-17 Score=134.40 Aligned_cols=151 Identities=17% Similarity=0.320 Sum_probs=114.1
Q ss_pred HHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-CCC--cc
Q 023625 103 VIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-AIP--QA 173 (279)
Q Consensus 103 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~~~--~~ 173 (279)
+++.++ ..+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .|
T Consensus 13 ~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 88 (239)
T 1xxl_A 13 MIKTAE--CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSF 88 (239)
T ss_dssp HHHHHT--CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCE
T ss_pred HHHHhC--cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcE
Confidence 444444 56788999999999999999999875 8999999 8888877641 2579999999977 544 49
Q ss_pred ceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcch-hhh-hhcCCeeCCHHHH
Q 023625 174 NAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDI-LMV-SLFRGKERSVDDW 251 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~-~~~-~~~~~~~r~~~e~ 251 (279)
|+|++..++|++++. ..+|++++++|+ |||++++.+...+... . ...+... ..+ .......++.++|
T Consensus 89 D~v~~~~~l~~~~~~--~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (239)
T 1xxl_A 89 DIITCRYAAHHFSDV--RKAVREVARVLK---QDGRFLLVDHYAPEDP----V--LDEFVNHLNRLRDPSHVRESSLSEW 157 (239)
T ss_dssp EEEEEESCGGGCSCH--HHHHHHHHHHEE---EEEEEEEEEECBCSSH----H--HHHHHHHHHHHHCTTCCCCCBHHHH
T ss_pred EEEEECCchhhccCH--HHHHHHHHHHcC---CCcEEEEEEcCCCCCh----h--HHHHHHHHHHhccccccCCCCHHHH
Confidence 999999999999874 588999999999 7999999987765431 0 1111111 111 1112455689999
Q ss_pred HHHHHHCCCceeEEEec
Q 023625 252 KKLFLAAGFSHYKITPM 268 (279)
Q Consensus 252 ~~ll~~aGf~~~~~~~~ 268 (279)
.++|+++||+++++...
T Consensus 158 ~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 158 QAMFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHCCCcEEEEEee
Confidence 99999999998877654
No 48
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.71 E-value=4.6e-17 Score=130.77 Aligned_cols=135 Identities=7% Similarity=0.058 Sum_probs=105.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----------------CCCeEEeeCCCCC-CC-
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----------------NDNLDFLGGNMFE-AI- 170 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------------~~ri~~~~~d~~~-~~- 170 (279)
..+..+|||+|||+|..+..|+++ +.+++++|+ +.+++.|++. ..+++++.+|+.+ +.
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 456789999999999999999997 568999999 8999887642 3589999999988 43
Q ss_pred --CccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCH
Q 023625 171 --PQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSV 248 (279)
Q Consensus 171 --~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~ 248 (279)
..||+|++..++|++++++..+++++++++|+ |||+++++....+...... .....+.
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lk---pgG~~~l~~~~~~~~~~~~-----------------~~~~~~~ 157 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMP---QACSGLLITLEYDQALLEG-----------------PPFSVPQ 157 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSC---SEEEEEEEEESSCSSSSSS-----------------CCCCCCH
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcC---CCcEEEEEEEecCccccCC-----------------CCCCCCH
Confidence 25999999999999998888899999999999 7999666554333211000 0012478
Q ss_pred HHHHHHHHHCCCceeEEEec
Q 023625 249 DDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 249 ~e~~~ll~~aGf~~~~~~~~ 268 (279)
+|+.+++++ ||++..+...
T Consensus 158 ~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 158 TWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp HHHHHTSCS-SEEEEEEEES
T ss_pred HHHHHHhcC-CcEEEEeccc
Confidence 999999998 9998777554
No 49
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.71 E-value=4.1e-17 Score=134.46 Aligned_cols=139 Identities=14% Similarity=0.291 Sum_probs=112.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-CCC--ccceeeehhhhc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-AIP--QANAVLLKWILH 183 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh 183 (279)
+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .||+|++..++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 57899999999999999999887 568999999 8888887742 2368999999876 433 499999999999
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCcee
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHY 263 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~ 263 (279)
++++++...+|++++++|+ |||++++.+..... . . .++. ..+...++.++|.++++++||+++
T Consensus 158 ~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~---~-~------~~~~----~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLR---PNGIIVIKDNMAQE---G-V------ILDD----VDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEE---EEEEEEEEEEEBSS---S-E------EEET----TTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred hCCHHHHHHHHHHHHHhcC---CCeEEEEEEccCCC---c-c------eecc----cCCcccCCHHHHHHHHHHcCCeEE
Confidence 9999888899999999999 79999999887654 1 0 0110 112334589999999999999999
Q ss_pred EEEecC
Q 023625 264 KITPML 269 (279)
Q Consensus 264 ~~~~~~ 269 (279)
++....
T Consensus 221 ~~~~~~ 226 (241)
T 2ex4_A 221 AEERQE 226 (241)
T ss_dssp EEEECC
T ss_pred EeeecC
Confidence 987654
No 50
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.71 E-value=7.7e-17 Score=137.10 Aligned_cols=170 Identities=17% Similarity=0.246 Sum_probs=117.3
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----C----CCeEEeeCCCCC-CC
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----N----DNLDFLGGNMFE-AI 170 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~----~ri~~~~~d~~~-~~ 170 (279)
..+++.++ ....+|||||||+|.++..+++. +.+++++|+ +.+++.+++. . .+++++.+|+.+ +.
T Consensus 73 ~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 73 REFATRTG---PVSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHC---CCCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHhhC---CCCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 34444443 33459999999999999999987 578999999 8888888741 2 689999999988 54
Q ss_pred C-ccceeee-hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCc--hhhhh----h----h-------
Q 023625 171 P-QANAVLL-KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDK--ESMET----Q----L------- 231 (279)
Q Consensus 171 ~-~~D~v~~-~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~--~~~~~----~----~------- 231 (279)
+ .||+|++ ..++|++++++..++|++++++|+ |||++++.....+...... ..... . .
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 224 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLE---PGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPA 224 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEE---EEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEE
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcC---CCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEecc
Confidence 4 5998885 578888888888999999999999 7999888765443210000 00000 0 0
Q ss_pred --hcchhhhh-----------hcCCeeCCHHHHHHHHHHCCCceeEEEecCC------ceeEEEEe
Q 023625 232 --CFDILMVS-----------LFRGKERSVDDWKKLFLAAGFSHYKITPMLG------VRSLIEAY 278 (279)
Q Consensus 232 --~~d~~~~~-----------~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~------~~~~i~~~ 278 (279)
...+.+.. ....+.++.++|.++|+++||+++++.+.+. ...+|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~ 290 (299)
T 3g2m_A 225 EEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAV 290 (299)
T ss_dssp EEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEE
T ss_pred ccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehh
Confidence 00000000 0012245999999999999999999987752 23566654
No 51
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.71 E-value=1.2e-16 Score=137.13 Aligned_cols=161 Identities=14% Similarity=0.159 Sum_probs=118.9
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCCCccc
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAIPQAN 174 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~~~~D 174 (279)
.+++.++ ..+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ ..++++++.+|+.+....||
T Consensus 81 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD 157 (318)
T 2fk8_A 81 LNLDKLD--LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVD 157 (318)
T ss_dssp HHHTTSC--CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCS
T ss_pred HHHHhcC--CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcC
Confidence 3444443 4567899999999999999999987 569999999 888888764 23679999999866224699
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCc----hhhh-hhhhcchhh-hhhcCCeeCCH
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDK----ESME-TQLCFDILM-VSLFRGKERSV 248 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~----~~~~-~~~~~d~~~-~~~~~~~~r~~ 248 (279)
+|++..++|++++++..++|+++.++|+ |||++++.+...+...... +... .....+... ....++...+.
T Consensus 158 ~v~~~~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 234 (318)
T 2fk8_A 158 RIVSIEAFEHFGHENYDDFFKRCFNIMP---ADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPST 234 (318)
T ss_dssp EEEEESCGGGTCGGGHHHHHHHHHHHSC---TTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCH
T ss_pred EEEEeChHHhcCHHHHHHHHHHHHHhcC---CCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCH
Confidence 9999999999988888999999999999 7999999888765421100 0000 000011111 11124566799
Q ss_pred HHHHHHHHHCCCceeEEEec
Q 023625 249 DDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 249 ~e~~~ll~~aGf~~~~~~~~ 268 (279)
+++.++++++||+++++...
T Consensus 235 ~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 235 EMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp HHHHHHHHHTTCBCCCCEEC
T ss_pred HHHHHHHHhCCCEEEEEEec
Confidence 99999999999999887664
No 52
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.71 E-value=6.3e-17 Score=130.56 Aligned_cols=138 Identities=15% Similarity=0.107 Sum_probs=108.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC-ccceeeehhhhccCCh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP-QANAVLLKWILHNWND 187 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~~~~ 187 (279)
+.+..+|||||||+|.++..+++. +.+++++|+ +.+++.++.. .++++..+|+.. +.. .||+|++..++|++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRR-LGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHH-HTSCCEECCGGGCCCCSCEEEEEECSCGGGSCH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHh-cCCceEEeeeccCCCCCcEEEEEecCchhhcCH
Confidence 456789999999999999999987 568999999 8888888764 267888898876 422 5999999999999998
Q ss_pred hHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCC-CceeEEE
Q 023625 188 EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG-FSHYKIT 266 (279)
Q Consensus 188 ~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aG-f~~~~~~ 266 (279)
++...+|++++++|+ |||++++........... ... .....++.++|.++++++| |+++++.
T Consensus 118 ~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~--------~~~------~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 118 DELADVLKLIWRALK---PGGLFYASYKSGEGEGRD--------KLA------RYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp HHHHHHHHHHHHHEE---EEEEEEEEEECCSSCEEC--------TTS------CEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred HHHHHHHHHHHHhcC---CCcEEEEEEcCCCccccc--------ccc------hhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 888999999999999 799998875433221100 000 0012358999999999999 9999886
Q ss_pred ec
Q 023625 267 PM 268 (279)
Q Consensus 267 ~~ 268 (279)
..
T Consensus 181 ~~ 182 (211)
T 3e23_A 181 SS 182 (211)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 53
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.70 E-value=6.9e-17 Score=133.99 Aligned_cols=150 Identities=17% Similarity=0.131 Sum_probs=107.3
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC--CCCeEEeeCCCCC-CCC--ccceeeehhhhccC
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT--NDNLDFLGGNMFE-AIP--QANAVLLKWILHNW 185 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~~ 185 (279)
.+..+|||||||+|.++..+++..+. +++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .||+|++..++|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 36789999999999999999998665 8999999 8888888752 3689999999977 543 59999999999999
Q ss_pred ChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC------------CCCCCchhhhhhhhcch-----hhhh-hcCCeeCC
Q 023625 186 NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE------------NQSQDKESMETQLCFDI-----LMVS-LFRGKERS 247 (279)
Q Consensus 186 ~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~------------~~~~~~~~~~~~~~~d~-----~~~~-~~~~~~r~ 247 (279)
++ ..++|++++++|+ |||++++...... .......... ..+++- .+.. ......++
T Consensus 122 ~~--~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~t 195 (253)
T 3g5l_A 122 AS--FDDICKKVYINLK---SSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPV-DRYFNESMRTSHFLGEDVQKYHRT 195 (253)
T ss_dssp SC--HHHHHHHHHHHEE---EEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEE-CCTTCCCEEEEEETTEEEEEECCC
T ss_pred hh--HHHHHHHHHHHcC---CCcEEEEEeCCCccccCccccceeccCCceEEEEe-ccccccceEEEeeccccCccEecC
Confidence 65 4689999999999 7999988643211 0000000000 000000 0000 00122349
Q ss_pred HHHHHHHHHHCCCceeEEEec
Q 023625 248 VDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 248 ~~e~~~ll~~aGf~~~~~~~~ 268 (279)
.++|.++|+++||+++++...
T Consensus 196 ~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 196 VTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp HHHHHHHHHHTTEEEEEEECC
T ss_pred HHHHHHHHHHcCCeeeeeecC
Confidence 999999999999999998754
No 54
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.69 E-value=1.3e-16 Score=129.40 Aligned_cols=142 Identities=9% Similarity=0.014 Sum_probs=104.8
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC------C----CCeEEeeCCCCC-CC--Ccccee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT------N----DNLDFLGGNMFE-AI--PQANAV 176 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~----~ri~~~~~d~~~-~~--~~~D~v 176 (279)
..+..+|||||||+|.++..+++++|..+++++|+ +.+++.+++. . .+++++.+|+.. +. ..||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 34678999999999999999999999899999999 8888887642 1 289999999865 33 259999
Q ss_pred eehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcch---hhhhhcCCeeCCHHHHH-
Q 023625 177 LLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDI---LMVSLFRGKERSVDDWK- 252 (279)
Q Consensus 177 ~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~r~~~e~~- 252 (279)
++..++|++++++..++|++++++|+ |||.+++.... +.. ..+..+ .+........++.+++.
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~Lk---pgG~li~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQ---PKIVIVTTPNI-EYN---------VKFANLPAGKLRHKDHRFEWTRSQFQN 173 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTC---CSEEEEEEEBH-HHH---------HHTC-----------CCSCBCHHHHHH
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcC---CCEEEEEccCc-ccc---------hhhcccccccccccccccccCHHHHHH
Confidence 99999999999888999999999999 79966554431 100 000000 00111123345889998
Q ss_pred ---HHHHHCCCceeEE
Q 023625 253 ---KLFLAAGFSHYKI 265 (279)
Q Consensus 253 ---~ll~~aGf~~~~~ 265 (279)
++++++||++...
T Consensus 174 ~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 174 WANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHHSSEEEEEC
T ss_pred HHHHHHHHcCceEEEE
Confidence 8999999987543
No 55
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.69 E-value=3e-16 Score=129.33 Aligned_cols=148 Identities=15% Similarity=0.219 Sum_probs=107.3
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCC-CCeEEeeCCCCCCCC--ccceeeehhhhccCCh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTN-DNLDFLGGNMFEAIP--QANAVLLKWILHNWND 187 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~ri~~~~~d~~~~~~--~~D~v~~~~vlh~~~~ 187 (279)
.+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++.. .+++++.+|+.+..+ .||+|++.++||++++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcC
Confidence 3567899999999999999999876 6999999 88898887532 289999999877422 5999999999999987
Q ss_pred hHHHHHHHHHH-HhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcc---h--hhhhhcCCeeCCHHHHHHHHHHCCCc
Q 023625 188 EESVKLLKKCK-EAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFD---I--LMVSLFRGKERSVDDWKKLFLAAGFS 261 (279)
Q Consensus 188 ~~~~~~L~~~~-~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d---~--~~~~~~~~~~r~~~e~~~ll~~aGf~ 261 (279)
. .++|++++ ++|+ |||++++.+......... .......+.. + ..........++.+++.++++++||+
T Consensus 119 ~--~~~l~~~~~~~Lk---pgG~l~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 192 (250)
T 2p7i_A 119 P--VALLKRINDDWLA---EGGRLFLVCPNANAVSRQ-IAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQ 192 (250)
T ss_dssp H--HHHHHHHHHTTEE---EEEEEEEEEECTTCHHHH-HHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCE
T ss_pred H--HHHHHHHHHHhcC---CCCEEEEEcCChHHHHHH-HHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCe
Confidence 5 58899999 9999 799999977533211000 0000000000 0 00011123557999999999999999
Q ss_pred eeEEEe
Q 023625 262 HYKITP 267 (279)
Q Consensus 262 ~~~~~~ 267 (279)
++++..
T Consensus 193 ~~~~~~ 198 (250)
T 2p7i_A 193 VTYRSG 198 (250)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 988764
No 56
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.69 E-value=2e-16 Score=133.57 Aligned_cols=152 Identities=14% Similarity=0.184 Sum_probs=110.6
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCC-CeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-CCC-ccceeeehhhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPD-IKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-AIP-QANAVLLKWIL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~~~-~~D~v~~~~vl 182 (279)
..+..+|||||||+|.++..+++.+|. .+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|++..++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l 99 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFL 99 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCG
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChh
Confidence 456789999999999999999999995 89999999 888887764 33489999999987 444 59999999999
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeec-----C---CCCCCchhhhhhhhcchhh--hhhcCCeeCCHHHHH
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI-----E---NQSQDKESMETQLCFDILM--VSLFRGKERSVDDWK 252 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~-----~---~~~~~~~~~~~~~~~d~~~--~~~~~~~~r~~~e~~ 252 (279)
|++++. .++|++++++|+ |||.+++.+... . +....++......+..+.. ....+....+..++.
T Consensus 100 ~~~~~~--~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (284)
T 3gu3_A 100 LHMTTP--ETMLQKMIHSVK---KGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIP 174 (284)
T ss_dssp GGCSSH--HHHHHHHHHTEE---EEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHH
T ss_pred hcCCCH--HHHHHHHHHHcC---CCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHH
Confidence 999876 488999999999 799999988651 1 1111100000001111111 111233344667899
Q ss_pred HHHHHCCCceeEEEe
Q 023625 253 KLFLAAGFSHYKITP 267 (279)
Q Consensus 253 ~ll~~aGf~~~~~~~ 267 (279)
++|+++||+.+++..
T Consensus 175 ~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 175 IYLSELGVKNIECRV 189 (284)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred HHHHHcCCCeEEEEE
Confidence 999999999887743
No 57
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=6.4e-16 Score=128.89 Aligned_cols=151 Identities=13% Similarity=0.148 Sum_probs=111.4
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC--cccee
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP--QANAV 176 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~--~~D~v 176 (279)
..+.+.++ ..+..+|||||||+|.++..+++ |+.+++++|+ +.+++.++.. .+++++.+|+.+ +.+ .||+|
T Consensus 24 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 24 NAIINLLN--LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVH-PQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HHHHHHHC--CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCC-TTEEEECCCTTSCCSCTTCBSEE
T ss_pred HHHHHHhC--CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhc-cCCEEEECchhhCCCCCCCEeEE
Confidence 33444443 45678999999999999999997 6789999999 8889988876 399999999987 554 59999
Q ss_pred eehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHH
Q 023625 177 LLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFL 256 (279)
Q Consensus 177 ~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~ 256 (279)
++.+++|++++. .++|++++++|+ ||++++.+...+..... .....+.. ..........+.+++. +|+
T Consensus 99 ~~~~~l~~~~~~--~~~l~~~~~~Lk----gG~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~-~l~ 166 (261)
T 3ege_A 99 ISILAIHHFSHL--EKSFQEMQRIIR----DGTIVLLTFDIRLAQRI----WLYDYFPF-LWEDALRFLPLDEQIN-LLQ 166 (261)
T ss_dssp EEESCGGGCSSH--HHHHHHHHHHBC----SSCEEEEEECGGGCCCC----GGGGTCHH-HHHHHHTSCCHHHHHH-HHH
T ss_pred EEcchHhhccCH--HHHHHHHHHHhC----CcEEEEEEcCCchhHHH----HHHHHHHH-HhhhhhhhCCCHHHHH-HHH
Confidence 999999999664 588999999999 79999988754332211 00000000 0111113344678888 999
Q ss_pred HCCCceeEEEec
Q 023625 257 AAGFSHYKITPM 268 (279)
Q Consensus 257 ~aGf~~~~~~~~ 268 (279)
++||+.+++...
T Consensus 167 ~aGF~~v~~~~~ 178 (261)
T 3ege_A 167 ENTKRRVEAIPF 178 (261)
T ss_dssp HHHCSEEEEEEC
T ss_pred HcCCCceeEEEe
Confidence 999998888665
No 58
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.68 E-value=4.2e-16 Score=127.42 Aligned_cols=149 Identities=11% Similarity=0.184 Sum_probs=110.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----------CCCeEEeeCCCCC-CCC--cccee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----------NDNLDFLGGNMFE-AIP--QANAV 176 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~ri~~~~~d~~~-~~~--~~D~v 176 (279)
+++..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. ..++++..+|+.+ +.+ .||+|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 456789999999999999999998 669999999 8888877641 2368999999987 543 59999
Q ss_pred eehhhhccCCh-hHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhh---------------
Q 023625 177 LLKWILHNWND-EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSL--------------- 240 (279)
Q Consensus 177 ~~~~vlh~~~~-~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~--------------- 240 (279)
++..++|++++ ++..++|++++++|+ |||++++.+......... ........+.....
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLK---PGAYLYLVEFGQNWHLKL---YRKRYLHDFPITKEEGSFLARDPETGETE 179 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEE---EEEEEEEEEEBCCTTSHH---HHHHHHHHHHHHCSTTEEEEECTTTCCEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcC---CCeEEEEEECCcchhHHH---HHHHhhhhccchhhhcceEecccccCCcc
Confidence 99999999976 446689999999999 799999988755322110 00000001100000
Q ss_pred cCCeeCCHHHHHHHHHHCCCceeEEEe
Q 023625 241 FRGKERSVDDWKKLFLAAGFSHYKITP 267 (279)
Q Consensus 241 ~~~~~r~~~e~~~ll~~aGf~~~~~~~ 267 (279)
.....++.++|.++++++||+++++..
T Consensus 180 ~~~~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 180 FIAHHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp EEEECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred eeeEeCCHHHHHHHHHHcCCEEEEEEe
Confidence 002356999999999999999998864
No 59
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.68 E-value=6.8e-16 Score=122.40 Aligned_cols=127 Identities=13% Similarity=0.129 Sum_probs=106.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC--ccceeeeh-hhhccC
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP--QANAVLLK-WILHNW 185 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~--~~D~v~~~-~vlh~~ 185 (279)
..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++...+++++.+|+.+ +.+ .||+|++. .++|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGS
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhc
Confidence 456789999999999999999987 568999999 88888888654679999999987 554 59999998 799999
Q ss_pred ChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEE
Q 023625 186 NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKI 265 (279)
Q Consensus 186 ~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~ 265 (279)
++++...+|+++.++|+ |||.+++..... ..++.+++.++++++||++.++
T Consensus 122 ~~~~~~~~l~~~~~~l~---~~G~l~~~~~~~--------------------------~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 122 AEDGREPALANIHRALG---ADGRAVIGFGAG--------------------------RGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp CHHHHHHHHHHHHHHEE---EEEEEEEEEETT--------------------------SSCCHHHHHHHHHHHTEEEEEE
T ss_pred ChHHHHHHHHHHHHHhC---CCCEEEEEeCCC--------------------------CCcCHHHHHHHHHHcCCEEeee
Confidence 88888999999999999 799888754211 1147889999999999999888
Q ss_pred Eec
Q 023625 266 TPM 268 (279)
Q Consensus 266 ~~~ 268 (279)
...
T Consensus 173 ~~~ 175 (195)
T 3cgg_A 173 FES 175 (195)
T ss_dssp ESS
T ss_pred ecc
Confidence 543
No 60
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=1.8e-16 Score=133.49 Aligned_cols=154 Identities=14% Similarity=0.145 Sum_probs=112.3
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC-ccceee
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP-QANAVL 177 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~-~~D~v~ 177 (279)
..+++.+. ..+..+|||||||+|.++..+++ +..+++++|+ +.+++.+++..+++++..+|+.+ +.+ .||+|+
T Consensus 47 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 122 (279)
T 3ccf_A 47 EDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVF 122 (279)
T ss_dssp CHHHHHHC--CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEE
T ss_pred HHHHHHhC--CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEE
Confidence 33444444 45678999999999999999998 7789999999 88998887644789999999987 444 599999
Q ss_pred ehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhh-------hhcCCeeCCHHH
Q 023625 178 LKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMV-------SLFRGKERSVDD 250 (279)
Q Consensus 178 ~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~~~r~~~e 250 (279)
+..++|++++. ..+|++++++|+ |||++++........ . .. ...+...... ........+.++
T Consensus 123 ~~~~l~~~~d~--~~~l~~~~~~Lk---pgG~l~~~~~~~~~~--~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (279)
T 3ccf_A 123 SNAMLHWVKEP--EAAIASIHQALK---SGGRFVAEFGGKGNI--K-YI--LEALYNALETLGIHNPQALNPWYFPSIGE 192 (279)
T ss_dssp EESCGGGCSCH--HHHHHHHHHHEE---EEEEEEEEEECTTTT--H-HH--HHHHHHHHHHHTCCCGGGGCCCCCCCHHH
T ss_pred EcchhhhCcCH--HHHHHHHHHhcC---CCcEEEEEecCCcch--H-HH--HHHHHHHHHhcCCccccCcCceeCCCHHH
Confidence 99999998875 488999999999 799998866432211 0 10 0001100000 000123458999
Q ss_pred HHHHHHHCCCceeEEEec
Q 023625 251 WKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 251 ~~~ll~~aGf~~~~~~~~ 268 (279)
|.++|+++||+++++...
T Consensus 193 ~~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 193 YVNILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEEEe
Confidence 999999999998877544
No 61
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.67 E-value=2e-15 Score=124.10 Aligned_cols=152 Identities=13% Similarity=0.176 Sum_probs=106.8
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC--CCCeEEeeCCCCC-CCC--ccceeeehhhhcc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT--NDNLDFLGGNMFE-AIP--QANAVLLKWILHN 184 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~ 184 (279)
..+..+|||||||+|.++..+++... .+++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .||+|++..++|+
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccc
Confidence 34678999999999999999998732 38999999 8888888753 2479999999987 543 5999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCch-hh---------hhhhhc-----chhhhh-hcCCeeCCH
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKE-SM---------ETQLCF-----DILMVS-LFRGKERSV 248 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~-~~---------~~~~~~-----d~~~~~-~~~~~~r~~ 248 (279)
+++ ...+|++++++|+ |||++++............+ +. ....++ ...++. ......++.
T Consensus 120 ~~~--~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 194 (243)
T 3bkw_A 120 VED--VARLFRTVHQALS---PGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTV 194 (243)
T ss_dssp CSC--HHHHHHHHHHHEE---EEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCH
T ss_pred cch--HHHHHHHHHHhcC---cCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccH
Confidence 875 4689999999999 79999987642110000000 00 000000 000000 111233689
Q ss_pred HHHHHHHHHCCCceeEEEec
Q 023625 249 DDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 249 ~e~~~ll~~aGf~~~~~~~~ 268 (279)
++|.++|+++||+++++...
T Consensus 195 ~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 195 GTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHcCCEeeeeccC
Confidence 99999999999999988754
No 62
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.67 E-value=5.6e-16 Score=127.59 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=81.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-CCC-ccceeeehh-hhcc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-AIP-QANAVLLKW-ILHN 184 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~~~-~~D~v~~~~-vlh~ 184 (279)
+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|++.. ++|+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccc
Confidence 5689999999999999999988 468999999 888888774 22389999999987 444 599999998 9999
Q ss_pred CC-hhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 185 WN-DEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 185 ~~-~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
++ +++..++|++++++|+ |||.+++.
T Consensus 115 ~~~~~~~~~~l~~~~~~L~---pgG~l~~~ 141 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLK---EGGVFIFD 141 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEE---EEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcC---CCcEEEEE
Confidence 84 4678899999999999 79988873
No 63
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.67 E-value=1.4e-15 Score=125.09 Aligned_cols=96 Identities=24% Similarity=0.388 Sum_probs=81.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-CCC-ccceeeehh-hh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-AIP-QANAVLLKW-IL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~~~-~~D~v~~~~-vl 182 (279)
+.+..+|||||||+|.++..+++. .+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|++.. ++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSL 107 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGG
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCch
Confidence 345689999999999999999887 78999999 888888774 23679999999877 444 599999976 88
Q ss_pred ccC-ChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 183 HNW-NDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 183 h~~-~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
|++ ++++..++|++++++|+ |||++++
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~---pgG~l~~ 135 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLT---DGGKLLF 135 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEE---EEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcC---CCeEEEE
Confidence 887 55678899999999999 7998876
No 64
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=2.6e-16 Score=130.74 Aligned_cols=148 Identities=11% Similarity=0.088 Sum_probs=109.5
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC-ccceeee
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP-QANAVLL 178 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~-~~D~v~~ 178 (279)
.+++.+. ..+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++...+++++.+|+.+ +.+ .||+|++
T Consensus 24 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 101 (259)
T 2p35_A 24 DLLAQVP--LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYA 101 (259)
T ss_dssp HHHTTCC--CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEE
T ss_pred HHHHhcC--CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEE
Confidence 3444443 45678999999999999999999999999999999 88998887645789999999987 422 5999999
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchh---hhh-------hcCCeeCCH
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDIL---MVS-------LFRGKERSV 248 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~---~~~-------~~~~~~r~~ 248 (279)
..++|++++ ...+|++++++|+ |||++++....... . +. ......+. .+. .......+.
T Consensus 102 ~~~l~~~~~--~~~~l~~~~~~L~---pgG~l~~~~~~~~~---~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (259)
T 2p35_A 102 NAVFQWVPD--HLAVLSQLMDQLE---SGGVLAVQMPDNLQ---E-PT--HIAMHETADGGPWKDAFSGGGLRRKPLPPP 170 (259)
T ss_dssp ESCGGGSTT--HHHHHHHHGGGEE---EEEEEEEEEECCTT---S-HH--HHHHHHHHHHSTTGGGC-------CCCCCH
T ss_pred eCchhhCCC--HHHHHHHHHHhcC---CCeEEEEEeCCCCC---c-HH--HHHHHHHhcCcchHHHhccccccccCCCCH
Confidence 999999866 4588999999999 79999988753211 1 10 00000000 000 012344689
Q ss_pred HHHHHHHHHCCCce
Q 023625 249 DDWKKLFLAAGFSH 262 (279)
Q Consensus 249 ~e~~~ll~~aGf~~ 262 (279)
++|.++|+++||++
T Consensus 171 ~~~~~~l~~aGf~v 184 (259)
T 2p35_A 171 SDYFNALSPKSSRV 184 (259)
T ss_dssp HHHHHHHGGGEEEE
T ss_pred HHHHHHHHhcCCce
Confidence 99999999999974
No 65
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.66 E-value=7.7e-17 Score=136.70 Aligned_cols=148 Identities=14% Similarity=0.263 Sum_probs=106.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC------C---------------------------
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT------N--------------------------- 156 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~--------------------------- 156 (279)
+.+..+|||||||+|.++..++++++..+++++|+ +.+++.|++. .
T Consensus 44 ~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 44 WFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp GTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred hcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 34678999999999999999999999999999999 8888877641 0
Q ss_pred ------------------------------CCeEEeeCCCCCCC--------CccceeeehhhhccC----ChhHHHHHH
Q 023625 157 ------------------------------DNLDFLGGNMFEAI--------PQANAVLLKWILHNW----NDEESVKLL 194 (279)
Q Consensus 157 ------------------------------~ri~~~~~d~~~~~--------~~~D~v~~~~vlh~~----~~~~~~~~L 194 (279)
.+++|..+|+.... ..||+|++..+++++ ++++..++|
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 58999999998622 259999999998554 777889999
Q ss_pred HHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHH--CCCceeEEEec
Q 023625 195 KKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLA--AGFSHYKITPM 268 (279)
Q Consensus 195 ~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~--aGf~~~~~~~~ 268 (279)
++++++|+ |||.+++....+..-.. .....-............++++.++|.+ +||+.+++...
T Consensus 204 ~~~~~~Lk---pGG~lil~~~~~~~y~~-------~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 204 RRIYRHLR---PGGILVLEPQPWSSYGK-------RKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHHEE---EEEEEEEECCCHHHHHT-------TTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHHhC---CCcEEEEecCCchhhhh-------hhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 99999999 79988875322211000 0000000000111223357899999999 99998888654
No 66
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.66 E-value=1.6e-15 Score=127.25 Aligned_cols=160 Identities=11% Similarity=0.114 Sum_probs=111.4
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hh------HHhhccc------CCCCeEEeeCC-C
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PH------VVDNLQG------TNDNLDFLGGN-M 166 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~------~~~~a~~------~~~ri~~~~~d-~ 166 (279)
.+++.++ ..+..+|||||||+|.++..+++++ |+.+++++|+ +. +++.+++ ..++++++.+| +
T Consensus 34 ~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 111 (275)
T 3bkx_A 34 AIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNL 111 (275)
T ss_dssp HHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCT
T ss_pred HHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChh
Confidence 3444444 5677899999999999999999996 7789999999 54 6776653 12689999998 5
Q ss_pred CC---CCC--ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhh-
Q 023625 167 FE---AIP--QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSL- 240 (279)
Q Consensus 167 ~~---~~~--~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~- 240 (279)
.. +.+ .||+|++..++|++++.+ .+++.++.+++ |||++++.+...+..................+...
T Consensus 112 ~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~---~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (275)
T 3bkx_A 112 SDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAA---VCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIA 186 (275)
T ss_dssp TTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTT---TCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHS
T ss_pred hhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhC---CCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcc
Confidence 43 223 599999999999998875 36777767666 79999999987765432210000000000000000
Q ss_pred ---cC--CeeCCHHHHHHHHHHCCCceeEEEec
Q 023625 241 ---FR--GKERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 241 ---~~--~~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
.. ....+.+++.++++++||+++++...
T Consensus 187 ~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 187 PSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 11 23469999999999999999887665
No 67
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.65 E-value=5.9e-16 Score=125.82 Aligned_cols=152 Identities=14% Similarity=0.170 Sum_probs=108.7
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-----C-C-cc
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-----I-P-QA 173 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-----~-~-~~ 173 (279)
.+++.+. ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. .++.+..+|+.+. . . .|
T Consensus 43 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 43 AILLAIL--GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp HHHHHHH--HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCE
T ss_pred HHHHHhh--cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCc
Confidence 3444443 345689999999999999999988 668999999 8899998876 7788888877541 1 2 39
Q ss_pred ceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhh------cCCeeCC
Q 023625 174 NAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSL------FRGKERS 247 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~~r~ 247 (279)
|+|++..++| ..+ ...+|++++++|+ |||++++.+......... +. ...+........ .....++
T Consensus 118 D~v~~~~~l~-~~~--~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (227)
T 3e8s_A 118 DLICANFALL-HQD--IIELLSAMRTLLV---PGGALVIQTLHPWSVADG-DY--QDGWREESFAGFAGDWQPMPWYFRT 188 (227)
T ss_dssp EEEEEESCCC-SSC--CHHHHHHHHHTEE---EEEEEEEEECCTTTTCTT-CC--SCEEEEECCTTSSSCCCCEEEEECC
T ss_pred cEEEECchhh-hhh--HHHHHHHHHHHhC---CCeEEEEEecCccccCcc-cc--ccccchhhhhccccCcccceEEEec
Confidence 9999999999 544 3589999999999 799999987654332211 00 000110000000 0123459
Q ss_pred HHHHHHHHHHCCCceeEEEe
Q 023625 248 VDDWKKLFLAAGFSHYKITP 267 (279)
Q Consensus 248 ~~e~~~ll~~aGf~~~~~~~ 267 (279)
.++|.++|+++||+++++..
T Consensus 189 ~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 189 LASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEec
Confidence 99999999999999998875
No 68
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=1.4e-15 Score=125.49 Aligned_cols=150 Identities=15% Similarity=0.170 Sum_probs=109.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC--CCCeEEeeCCCCC-CCC-------ccceeeeh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT--NDNLDFLGGNMFE-AIP-------QANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~~ri~~~~~d~~~-~~~-------~~D~v~~~ 179 (279)
..+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .+|+|++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 45678999999999999999999987 7999999 8888888752 3589999999987 322 28999999
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhh--h--hhcchhhhhhcCCeeCCHHHHHHHH
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMET--Q--LCFDILMVSLFRGKERSVDDWKKLF 255 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~--~--~~~d~~~~~~~~~~~r~~~e~~~ll 255 (279)
.++|++++++..++|++++++|+ |||++++++...++.......... . ......+........++.+++.++|
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLG---KQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHT---TTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred chhhcCCHHHHHHHHHHHHHHcC---CCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 99999998888999999999999 799999998754421000000000 0 0000000001111235899999999
Q ss_pred HHCCCceeEEEe
Q 023625 256 LAAGFSHYKITP 267 (279)
Q Consensus 256 ~~aGf~~~~~~~ 267 (279)
+||++++...
T Consensus 209 --aGf~~~~~~~ 218 (245)
T 3ggd_A 209 --PDFEILSQGE 218 (245)
T ss_dssp --TTEEEEEEEC
T ss_pred --CCCEEEeccc
Confidence 9999887644
No 69
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.64 E-value=3.8e-15 Score=118.66 Aligned_cols=142 Identities=13% Similarity=0.123 Sum_probs=109.8
Q ss_pred HHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC-CCC-ccc
Q 023625 103 VIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE-AIP-QAN 174 (279)
Q Consensus 103 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~-~~~-~~D 174 (279)
+.+.++ ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ...++++..+|+.+ +.+ .||
T Consensus 24 l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D 99 (199)
T 2xvm_A 24 VLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYD 99 (199)
T ss_dssp HHHHTT--TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEE
T ss_pred HHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCce
Confidence 444443 345679999999999999999987 569999999 888888764 12479999999987 444 599
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHH
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKL 254 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~l 254 (279)
+|++..++|++++++..++|++++++|+ |||.+++++.........+ ......++.++++++
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~---~gG~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~ 161 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTK---PGGYNLIVAAMDTADYPCT---------------VGFPFAFKEGELRRY 161 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEE---EEEEEEEEEEBCCSSSCCC---------------SCCSCCBCTTHHHHH
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcC---CCeEEEEEEeeccCCcCCC---------------CCCCCccCHHHHHHH
Confidence 9999999999998888999999999999 7999999887654432110 001223478899999
Q ss_pred HHHCCCceeEEEec
Q 023625 255 FLAAGFSHYKITPM 268 (279)
Q Consensus 255 l~~aGf~~~~~~~~ 268 (279)
|++ |++++....
T Consensus 162 ~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 162 YEG--WERVKYNED 173 (199)
T ss_dssp TTT--SEEEEEECC
T ss_pred hcC--CeEEEeccc
Confidence 987 988877543
No 70
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.64 E-value=1.5e-15 Score=125.88 Aligned_cols=133 Identities=8% Similarity=0.024 Sum_probs=105.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-C---------------------CCCeEEeeCCCCC
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-T---------------------NDNLDFLGGNMFE 168 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~---------------------~~ri~~~~~d~~~ 168 (279)
.+..+|||+|||+|..+..|+++ +.+++++|+ +.+++.|++ . ..+++++.+|+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 46789999999999999999987 568999999 888888753 1 2589999999988
Q ss_pred -CC---CccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCe
Q 023625 169 -AI---PQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGK 244 (279)
Q Consensus 169 -~~---~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 244 (279)
+. ..||+|+...++|.+++++..+++++++++|+ |||+++++....+......+ ..
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lk---pGG~l~l~~~~~~~~~~~g~-----------------~~ 204 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLR---KEFQYLVAVLSYDPTKHAGP-----------------PF 204 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEE---EEEEEEEEEEECCTTSCCCS-----------------SC
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcC---CCeEEEEEEEecCCccCCCC-----------------CC
Confidence 43 35999999999999998888899999999999 79999876655432211100 01
Q ss_pred eCCHHHHHHHHHHCCCceeEEEe
Q 023625 245 ERSVDDWKKLFLAAGFSHYKITP 267 (279)
Q Consensus 245 ~r~~~e~~~ll~~aGf~~~~~~~ 267 (279)
..+.+|+.+++++ +|++..+..
T Consensus 205 ~~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 205 YVPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp CCCHHHHHHHHTT-TEEEEEEEE
T ss_pred CCCHHHHHHHhhC-CeEEEEEec
Confidence 1488999999988 598877654
No 71
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.62 E-value=1.9e-15 Score=127.58 Aligned_cols=145 Identities=17% Similarity=0.200 Sum_probs=108.0
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-C-CC--ccceeeehhh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-A-IP--QANAVLLKWI 181 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~-~~--~~D~v~~~~v 181 (279)
+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..++++++.+|+.+ + .+ .||+|++..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 4679999999999999999998 679999999 888888774 22689999999987 3 23 5999999999
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhc--chhhh--------hhcCCeeCCHHHH
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF--DILMV--------SLFRGKERSVDDW 251 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~--d~~~~--------~~~~~~~r~~~e~ 251 (279)
+|++++. .++|++++++|+ |||.+++.+......... ..... ..... .......++.+++
T Consensus 146 l~~~~~~--~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (285)
T 4htf_A 146 LEWVADP--RSVLQTLWSVLR---PGGVLSLMFYNAHGLLMH-----NMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQV 215 (285)
T ss_dssp GGGCSCH--HHHHHHHHHTEE---EEEEEEEEEEBHHHHHHH-----HHHTTCHHHHHTTCCCC----CCCSCCBCHHHH
T ss_pred hhcccCH--HHHHHHHHHHcC---CCeEEEEEEeCCchHHHH-----HHHhcCHHHHhhhccccccccCCCCCCCCHHHH
Confidence 9999775 579999999999 799999887543221000 00000 00000 0011345689999
Q ss_pred HHHHHHCCCceeEEEecC
Q 023625 252 KKLFLAAGFSHYKITPML 269 (279)
Q Consensus 252 ~~ll~~aGf~~~~~~~~~ 269 (279)
.++++++||+++++..+.
T Consensus 216 ~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 216 YLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp HHHHHHTTCEEEEEEEES
T ss_pred HHHHHHCCCceeeeeeEE
Confidence 999999999999887664
No 72
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.62 E-value=5.9e-15 Score=119.70 Aligned_cols=136 Identities=16% Similarity=0.133 Sum_probs=102.3
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC--ccceeeehhhhccCChh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP--QANAVLLKWILHNWNDE 188 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~~~~~ 188 (279)
+..+|||||||+|.++..+++. +++|. +.+++.+++. ++++..+|+.+ +.+ .||+|++..++|++++.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFVDDP 118 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCH
T ss_pred CCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhccCH
Confidence 3789999999999999988764 99999 8888888865 79999999876 544 49999999999998764
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhh--hhhcCCeeCCHHHHHHHHHHCCCceeEEE
Q 023625 189 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILM--VSLFRGKERSVDDWKKLFLAAGFSHYKIT 266 (279)
Q Consensus 189 ~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~r~~~e~~~ll~~aGf~~~~~~ 266 (279)
.++|+++.++|+ |||.+++.+..... +. ......... ........++.++|.++|+++||+++++.
T Consensus 119 --~~~l~~~~~~L~---pgG~l~i~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 119 --ERALKEAYRILK---KGGYLIVGIVDRES-----FL--GREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp --HHHHHHHHHHEE---EEEEEEEEEECSSS-----HH--HHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred --HHHHHHHHHHcC---CCcEEEEEEeCCcc-----HH--HHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 589999999999 79999987753221 10 000000000 00112345699999999999999998886
Q ss_pred ec
Q 023625 267 PM 268 (279)
Q Consensus 267 ~~ 268 (279)
..
T Consensus 187 ~~ 188 (219)
T 1vlm_A 187 QT 188 (219)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 73
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.61 E-value=3.7e-15 Score=124.03 Aligned_cols=146 Identities=11% Similarity=0.146 Sum_probs=104.1
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----CCCeEEeeCCCCC-CCC--ccceeeehhhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----NDNLDFLGGNMFE-AIP--QANAVLLKWIL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~ri~~~~~d~~~-~~~--~~D~v~~~~vl 182 (279)
..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .||+|++..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 456789999999999999999987 578999999 8888887642 4689999999977 544 49999999999
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhc----CCeeCCHHHHHHHHHHC
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLF----RGKERSVDDWKKLFLAA 258 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~r~~~e~~~ll~~a 258 (279)
|++++. ..+|++++++|+ |||.+++. ...++ ..........+..+...... .....+.+++.++++++
T Consensus 115 ~~~~~~--~~~l~~~~~~L~---pgG~l~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (263)
T 2yqz_A 115 HLVPDW--PKVLAEAIRVLK---PGGALLEG-WDQAE--ASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRL 186 (263)
T ss_dssp GGCTTH--HHHHHHHHHHEE---EEEEEEEE-EEEEC--CCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred hhcCCH--HHHHHHHHHHCC---CCcEEEEE-ecCCC--ccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHc
Confidence 998864 588999999999 79999887 21111 11000000011111100000 11234789999999999
Q ss_pred CCceeEEE
Q 023625 259 GFSHYKIT 266 (279)
Q Consensus 259 Gf~~~~~~ 266 (279)
||+++.+.
T Consensus 187 Gf~~~~~~ 194 (263)
T 2yqz_A 187 GLKPRTRE 194 (263)
T ss_dssp TCCCEEEE
T ss_pred CCCcceEE
Confidence 99977653
No 74
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.61 E-value=3e-15 Score=121.87 Aligned_cols=156 Identities=15% Similarity=0.207 Sum_probs=108.5
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC---CCC--ccc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE---AIP--QAN 174 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~---~~~--~~D 174 (279)
..+++.++ .+..+|||||||+|.++..+++. + .+++++|+ +.+++.+++.. .++..+|+.+ +.+ .||
T Consensus 23 ~~l~~~~~---~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD 95 (230)
T 3cc8_A 23 PNLLKHIK---KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL--DHVVLGDIETMDMPYEEEQFD 95 (230)
T ss_dssp HHHHTTCC---TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS--SEEEESCTTTCCCCSCTTCEE
T ss_pred HHHHHHhc---cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC--CcEEEcchhhcCCCCCCCccC
Confidence 44554443 46789999999999999999998 4 89999999 88888887642 3788888865 233 499
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhh-hhcchhhhhhcCCeeCCHHHHHH
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQ-LCFDILMVSLFRGKERSVDDWKK 253 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~r~~~e~~~ 253 (279)
+|++..++|++++. ..+|++++++|+ |||.+++.................. ...+...........++.++|.+
T Consensus 96 ~v~~~~~l~~~~~~--~~~l~~~~~~L~---~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (230)
T 3cc8_A 96 CVIFGDVLEHLFDP--WAVIEKVKPYIK---QNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLR 170 (230)
T ss_dssp EEEEESCGGGSSCH--HHHHHHTGGGEE---EEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHH
T ss_pred EEEECChhhhcCCH--HHHHHHHHHHcC---CCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHH
Confidence 99999999999875 488999999999 7999998765432110000000000 00000000011124569999999
Q ss_pred HHHHCCCceeEEEec
Q 023625 254 LFLAAGFSHYKITPM 268 (279)
Q Consensus 254 ll~~aGf~~~~~~~~ 268 (279)
+++++||+++++...
T Consensus 171 ~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 171 MFLKAGYSISKVDRV 185 (230)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCeEEEEEec
Confidence 999999999888764
No 75
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.59 E-value=9.7e-15 Score=117.97 Aligned_cols=130 Identities=13% Similarity=0.148 Sum_probs=99.1
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhcccCCCCeEEeeCCCCC-CCC--ccceeee
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQGTNDNLDFLGGNMFE-AIP--QANAVLL 178 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~-~~~--~~D~v~~ 178 (279)
.+++.+. ...+..+|||||||+|.++..++ .+++++|+.+. ++++..+|+.+ +.+ .||+|++
T Consensus 57 ~~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~---------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 57 RIARDLR-QRPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL---------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp HHHHHHH-TSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS---------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred HHHHHHh-ccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC---------CceEEEeccccCCCCCCCEeEEEE
Confidence 3444443 13466899999999999998773 68999998332 57788899877 544 4999999
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHC
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAA 258 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~a 258 (279)
..++| +. +...+|++++++|+ |||.+++.+.... ..+.+++.++++++
T Consensus 122 ~~~l~-~~--~~~~~l~~~~~~L~---~gG~l~i~~~~~~--------------------------~~~~~~~~~~l~~~ 169 (215)
T 2zfu_A 122 CLSLM-GT--NIRDFLEEANRVLK---PGGLLKVAEVSSR--------------------------FEDVRTFLRAVTKL 169 (215)
T ss_dssp ESCCC-SS--CHHHHHHHHHHHEE---EEEEEEEEECGGG--------------------------CSCHHHHHHHHHHT
T ss_pred ehhcc-cc--CHHHHHHHHHHhCC---CCeEEEEEEcCCC--------------------------CCCHHHHHHHHHHC
Confidence 99998 33 35689999999999 7999999874210 01788999999999
Q ss_pred CCceeEEEecCCceeEEEEe
Q 023625 259 GFSHYKITPMLGVRSLIEAY 278 (279)
Q Consensus 259 Gf~~~~~~~~~~~~~~i~~~ 278 (279)
||+++++...++...+++++
T Consensus 170 Gf~~~~~~~~~~~~~~~~~~ 189 (215)
T 2zfu_A 170 GFKIVSKDLTNSHFFLFDFQ 189 (215)
T ss_dssp TEEEEEEECCSTTCEEEEEE
T ss_pred CCEEEEEecCCCeEEEEEEE
Confidence 99998877666666666665
No 76
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.59 E-value=1.4e-14 Score=116.24 Aligned_cols=132 Identities=11% Similarity=0.124 Sum_probs=107.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCCCCC-ccceeeehhhhc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFEAIP-QANAVLLKWILH 183 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh 183 (279)
..+..+|||+|||+|.++..+++ .+..+++++|+ +.+++.+++ ...++++..+|+.+..+ .||+|++..++|
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAE 136 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred ccCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHH
Confidence 35678999999999999999876 56779999999 888888774 12349999999987443 699999987775
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCcee
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHY 263 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~ 263 (279)
+ ...+++++.++|+ |||++++.+.... +.+++.++++++||+.+
T Consensus 137 ~-----~~~~l~~~~~~L~---~gG~l~~~~~~~~----------------------------~~~~~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 137 I-----LLDLIPQLDSHLN---EDGQVIFSGIDYL----------------------------QLPKIEQALAENSFQID 180 (205)
T ss_dssp H-----HHHHGGGSGGGEE---EEEEEEEEEEEGG----------------------------GHHHHHHHHHHTTEEEE
T ss_pred H-----HHHHHHHHHHhcC---CCCEEEEEecCcc----------------------------cHHHHHHHHHHcCCceE
Confidence 3 4688999999999 7999988654321 45688999999999999
Q ss_pred EEEecCCceeEEEEeC
Q 023625 264 KITPMLGVRSLIEAYP 279 (279)
Q Consensus 264 ~~~~~~~~~~~i~~~~ 279 (279)
++.....+.+++.-+|
T Consensus 181 ~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 181 LKMRAGRWIGLAISRK 196 (205)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred EeeccCCEEEEEEecc
Confidence 9999899999887765
No 77
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.58 E-value=2.3e-15 Score=127.40 Aligned_cols=100 Identities=20% Similarity=0.186 Sum_probs=84.3
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCC-C---CC--ccc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFE-A---IP--QAN 174 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~-~---~~--~~D 174 (279)
..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++. ..++.+..+|+.+ + .+ .||
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 55 QHGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp HTTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeE
Confidence 3567899999999999999999984 48999999 8888887631 2578899999876 4 33 599
Q ss_pred eeeeh-hhhccCCh-----hHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 175 AVLLK-WILHNWND-----EESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 175 ~v~~~-~vlh~~~~-----~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+|++. +++|++++ ++..++|++++++|+ |||.+++...
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~ 176 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVR---PGGLLVIDHR 176 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEE---EEEEEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcC---CCeEEEEEeC
Confidence 99998 89999988 778899999999999 7999988764
No 78
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.5e-14 Score=122.97 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=85.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccC-------CCCeEEeeCCCCC-C--C------Ccc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQGT-------NDNLDFLGGNMFE-A--I------PQA 173 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-------~~ri~~~~~d~~~-~--~------~~~ 173 (279)
.+..+|||||||+|.++..+++.+ +..+++++|+ +.+++.+++. ..+++++.+|+.+ + . ..|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 467899999999999999999987 8899999999 8888888741 5799999999987 3 2 259
Q ss_pred ceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 174 NAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
|+|++..++|++ +..++|++++++|+ |||.+++.+..
T Consensus 115 D~V~~~~~l~~~---~~~~~l~~~~~~Lk---pgG~l~i~~~~ 151 (299)
T 3g5t_A 115 DMITAVECAHWF---DFEKFQRSAYANLR---KDGTIAIWGYA 151 (299)
T ss_dssp EEEEEESCGGGS---CHHHHHHHHHHHEE---EEEEEEEEEEE
T ss_pred eEEeHhhHHHHh---CHHHHHHHHHHhcC---CCcEEEEEecC
Confidence 999999999998 35689999999999 79999986544
No 79
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.57 E-value=1.6e-14 Score=122.27 Aligned_cols=154 Identities=10% Similarity=0.022 Sum_probs=109.1
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CC-C--ccceeeeh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AI-P--QANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~-~--~~D~v~~~ 179 (279)
..+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ ...+++++.+|+.+ +. + .||+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 356789999999999999998876 5568999999 888887774 12478999999987 54 2 49999999
Q ss_pred hhhcc--CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCC-------CCchhh-----------h-hhhhcchhhh
Q 023625 180 WILHN--WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQS-------QDKESM-----------E-TQLCFDILMV 238 (279)
Q Consensus 180 ~vlh~--~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~-------~~~~~~-----------~-~~~~~d~~~~ 238 (279)
.++|+ .+.++..++|++++++|+ |||++++......... ...... . ....+...+.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 217 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLR---PGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLL 217 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEE---EEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEET
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcC---CCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEc
Confidence 99988 567778899999999999 7999998765421100 000000 0 0000000000
Q ss_pred hh---cCCeeCCHHHHHHHHHHCCCceeEEEec
Q 023625 239 SL---FRGKERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 239 ~~---~~~~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
.. .....++.+++.++++++||+++++...
T Consensus 218 ~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 218 DSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp TSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred hhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 00 0123458999999999999999988754
No 80
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.57 E-value=1.2e-14 Score=120.62 Aligned_cols=98 Identities=9% Similarity=0.193 Sum_probs=84.2
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC--ccceeeehhhhccCCh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP--QANAVLLKWILHNWND 187 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~~~~ 187 (279)
+...+|||||||+|.++..|++.+ .+++++|+ +.+++.|++. .+++++.+|+.+ +.+ .||+|++..++|.++.
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~-~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~ 114 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRH-PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDL 114 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCC-TTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhc-CCceeehhhhhhhcccCCcccEEEEeeehhHhhH
Confidence 456799999999999999999875 57999999 8999999876 799999999987 665 4999999999987754
Q ss_pred hHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 188 EESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 188 ~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
+ +++++++++|| |||.++++....+
T Consensus 115 ~---~~~~e~~rvLk---pgG~l~~~~~~~~ 139 (257)
T 4hg2_A 115 D---RFWAELRRVAR---PGAVFAAVTYGLT 139 (257)
T ss_dssp H---HHHHHHHHHEE---EEEEEEEEEECCC
T ss_pred H---HHHHHHHHHcC---CCCEEEEEECCCC
Confidence 3 68999999999 7999998876443
No 81
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.56 E-value=1.9e-14 Score=121.93 Aligned_cols=141 Identities=13% Similarity=0.107 Sum_probs=95.2
Q ss_pred CCCEEEEecCCccHHHH----HHHHHCCCCeE--EEeeC-hhHHhhcccC------CCCeEE--eeCCCCC-C------C
Q 023625 113 GLKSLVDVAGGTGIMAR----AIATAFPDIKC--TVFDL-PHVVDNLQGT------NDNLDF--LGGNMFE-A------I 170 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~----~l~~~~p~~~~--~~~D~-~~~~~~a~~~------~~ri~~--~~~d~~~-~------~ 170 (279)
+..+|||||||+|.++. .++.++|+.++ +++|. +.+++.+++. ..++.+ ..++..+ + .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 45699999999997655 44556788754 99999 8888877631 134444 4555432 1 1
Q ss_pred --CccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhh--cCCeeC
Q 023625 171 --PQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSL--FRGKER 246 (279)
Q Consensus 171 --~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~r 246 (279)
..||+|++.++||+++|. .+.|++++++|+ |||++++.+...+ . .. ...+....-... .....+
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lk---pgG~l~i~~~~~~----~-~~--~~~~~~~~~~~~~~~~~~~~ 199 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDI--PATLKFFHSLLG---TNAKMLIIVVSGS----S-GW--DKLWKKYGSRFPQDDLCQYI 199 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCH--HHHHHHHHHTEE---EEEEEEEEEECTT----S-HH--HHHHHHHGGGSCCCTTCCCC
T ss_pred CCCceeEEEEeeeeeecCCH--HHHHHHHHHHcC---CCcEEEEEEecCC----c-cH--HHHHHHHHHhccCCCcccCC
Confidence 259999999999999885 478999999999 7999999864311 1 11 011111000000 012346
Q ss_pred CHHHHHHHHHHCCCceeEE
Q 023625 247 SVDDWKKLFLAAGFSHYKI 265 (279)
Q Consensus 247 ~~~e~~~ll~~aGf~~~~~ 265 (279)
+.++|.++|+++||++...
T Consensus 200 ~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 200 TSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp CHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHCCCceEEE
Confidence 8999999999999997764
No 82
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=9.2e-15 Score=117.44 Aligned_cols=151 Identities=11% Similarity=0.085 Sum_probs=107.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-CCC--ccceeeehhhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-AIP--QANAVLLKWIL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~~~--~~D~v~~~~vl 182 (279)
..+..+|||+|||+|..+..++.. ++.+++++|. +.+++.+++ ...+++++.+|+.+ +.+ .||+|++..++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 456789999999999985555544 5679999999 888888764 23679999999987 544 49999999999
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhh-hhcchhhhhhcCCeeCCHHHHHHHHHHCCCc
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQ-LCFDILMVSLFRGKERSVDDWKKLFLAAGFS 261 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~ 261 (279)
|++++++..++|++++++|+ |||.+++.+...++........... .+.............++.+++.++|+++||.
T Consensus 100 ~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~ 176 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLK---PGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVL 176 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEE
T ss_pred HhCCHHHHHHHHHHHHHHcC---CCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCce
Confidence 99988888999999999999 7999999887655432110000000 0000000000112456899999999999987
Q ss_pred eeEE
Q 023625 262 HYKI 265 (279)
Q Consensus 262 ~~~~ 265 (279)
..+.
T Consensus 177 ~~~~ 180 (209)
T 2p8j_A 177 FKED 180 (209)
T ss_dssp EEEE
T ss_pred eeee
Confidence 6554
No 83
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.56 E-value=4.3e-14 Score=119.24 Aligned_cols=141 Identities=15% Similarity=0.146 Sum_probs=107.8
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-CCC-ccc
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-AIP-QAN 174 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~~~-~~D 174 (279)
.+++.++ ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ...++++..+|+.+ +.+ .||
T Consensus 111 ~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD 186 (286)
T 3m70_A 111 DVVDAAK--IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYD 186 (286)
T ss_dssp HHHHHHH--HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEE
T ss_pred HHHHHhh--ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCcc
Confidence 3444444 346789999999999999999998 568999999 888887764 22389999999987 334 599
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHH
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKL 254 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~l 254 (279)
+|++..++|++++++...+|+++.++|+ |||.++++.....+....+ .......+.+++.++
T Consensus 187 ~i~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~ 248 (286)
T 3m70_A 187 FIVSTVVFMFLNRERVPSIIKNMKEHTN---VGGYNLIVAAMSTDDVPCP---------------LPFSFTFAENELKEY 248 (286)
T ss_dssp EEEECSSGGGSCGGGHHHHHHHHHHTEE---EEEEEEEEEEBCCSSSCCS---------------SCCSCCBCTTHHHHH
T ss_pred EEEEccchhhCCHHHHHHHHHHHHHhcC---CCcEEEEEEecCCCCCCCC---------------CCccccCCHHHHHHH
Confidence 9999999999999999999999999999 7999888776554432210 001123467788888
Q ss_pred HHHCCCceeEEE
Q 023625 255 FLAAGFSHYKIT 266 (279)
Q Consensus 255 l~~aGf~~~~~~ 266 (279)
++. |+++...
T Consensus 249 ~~~--~~~~~~~ 258 (286)
T 3m70_A 249 YKD--WEFLEYN 258 (286)
T ss_dssp TTT--SEEEEEE
T ss_pred hcC--CEEEEEE
Confidence 865 8877664
No 84
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.55 E-value=2.6e-15 Score=125.40 Aligned_cols=140 Identities=15% Similarity=0.109 Sum_probs=98.8
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CC------------------------------
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TN------------------------------ 156 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~------------------------------ 156 (279)
.+..+|||||||+|.++..++...- .+++++|+ +.+++.|++ ..
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 3567999999999988776554421 26999999 888887653 00
Q ss_pred CCeE-EeeCCCCCC-------CCccceeeehhhhccCC--hhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchh
Q 023625 157 DNLD-FLGGNMFEA-------IPQANAVLLKWILHNWN--DEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKES 226 (279)
Q Consensus 157 ~ri~-~~~~d~~~~-------~~~~D~v~~~~vlh~~~--~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~ 226 (279)
.++. ++.+|+.+. .+.||+|++..+||+.. .++..++|++++++|| |||.+++.+......
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LK---PGG~li~~~~~~~~~------ 203 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLK---PGGHLVTTVTLRLPS------ 203 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE---EEEEEEEEEESSCCE------
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcC---CCcEEEEEEeecCcc------
Confidence 1233 889998872 23599999999999753 3567789999999999 799999986532110
Q ss_pred hhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEec
Q 023625 227 METQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 227 ~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
....-. .......+.+++.++|+++||+++++...
T Consensus 204 ----~~~g~~---~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 204 ----YMVGKR---EFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp ----EEETTE---EEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ----ceeCCe---EeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 000000 00112348999999999999999888654
No 85
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.55 E-value=4.4e-15 Score=123.69 Aligned_cols=141 Identities=16% Similarity=0.156 Sum_probs=103.6
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC--CC-------------------------------
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT--ND------------------------------- 157 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~~------------------------------- 157 (279)
.+..+|||||||+|.++..+++..+ .+++++|+ +.+++.+++. ..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3467999999999999999988765 58999999 8888877641 11
Q ss_pred -Ce-EEeeCCCCCC-C------CccceeeehhhhccCChh--HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchh
Q 023625 158 -NL-DFLGGNMFEA-I------PQANAVLLKWILHNWNDE--ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKES 226 (279)
Q Consensus 158 -ri-~~~~~d~~~~-~------~~~D~v~~~~vlh~~~~~--~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~ 226 (279)
++ ++..+|+.+. . ..||+|++..++|++++. +...+|++++++|+ |||.+++.+.....
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk---pgG~li~~~~~~~~------- 203 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLK---PGGFLVMVDALKSS------- 203 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE---EEEEEEEEEESSCC-------
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCC---CCcEEEEEecCCCc-------
Confidence 27 8999999762 1 249999999999955433 67799999999999 79999988743211
Q ss_pred hhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecC
Q 023625 227 METQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPML 269 (279)
Q Consensus 227 ~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~ 269 (279)
++... -........+.+++.++|+++||+++++...+
T Consensus 204 -----~~~~~-~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 204 -----YYMIG-EQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp -----EEEET-TEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred -----eEEcC-CccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 00000 00001223488999999999999999887554
No 86
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.55 E-value=1.7e-13 Score=109.83 Aligned_cols=120 Identities=8% Similarity=0.235 Sum_probs=97.0
Q ss_pred HHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCC---Ccc
Q 023625 103 VIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAI---PQA 173 (279)
Q Consensus 103 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~---~~~ 173 (279)
++..+. ..+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.+++. .++++++.+|+.+.. +.|
T Consensus 32 ~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 109 (204)
T 3e05_A 32 TLSKLR--LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDP 109 (204)
T ss_dssp HHHHTT--CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCC
T ss_pred HHHHcC--CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCC
Confidence 444444 56778999999999999999999999999999999 8888888741 268999999997632 469
Q ss_pred ceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHH
Q 023625 174 NAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKK 253 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ 253 (279)
|+|++...++ +..++++++.++|+ |||++++...... +.+++.+
T Consensus 110 D~i~~~~~~~-----~~~~~l~~~~~~Lk---pgG~l~~~~~~~~----------------------------~~~~~~~ 153 (204)
T 3e05_A 110 DRVFIGGSGG-----MLEEIIDAVDRRLK---SEGVIVLNAVTLD----------------------------TLTKAVE 153 (204)
T ss_dssp SEEEESCCTT-----CHHHHHHHHHHHCC---TTCEEEEEECBHH----------------------------HHHHHHH
T ss_pred CEEEECCCCc-----CHHHHHHHHHHhcC---CCeEEEEEecccc----------------------------cHHHHHH
Confidence 9999988775 35688999999999 7999988553210 3567888
Q ss_pred HHHHCCC
Q 023625 254 LFLAAGF 260 (279)
Q Consensus 254 ll~~aGf 260 (279)
+++++||
T Consensus 154 ~l~~~g~ 160 (204)
T 3e05_A 154 FLEDHGY 160 (204)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 9999998
No 87
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.55 E-value=3.1e-13 Score=111.72 Aligned_cols=97 Identities=27% Similarity=0.417 Sum_probs=81.1
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-CCC-ccceeeeh-hhhc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-AIP-QANAVLLK-WILH 183 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~~~-~~D~v~~~-~vlh 183 (279)
.+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|++. ..+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIM 117 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchh
Confidence 45689999999999999999987 568999999 888888774 23479999999987 444 59999986 4667
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
++++++..++|++++++|+ |||.+++.
T Consensus 118 ~~~~~~~~~~l~~~~~~L~---pgG~li~~ 144 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALK---PGGVFITD 144 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEE---EEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcC---CCeEEEEe
Confidence 7788888999999999999 79987763
No 88
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.54 E-value=5e-14 Score=125.16 Aligned_cols=149 Identities=12% Similarity=0.038 Sum_probs=105.9
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC------CC--C
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE------AI--P 171 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~------~~--~ 171 (279)
..+++.+. ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++. .+......+.. +. .
T Consensus 97 ~~l~~~~~--~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~l~~~~~ 170 (416)
T 4e2x_A 97 RDFLATEL--TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK--GIRVRTDFFEKATADDVRRTEG 170 (416)
T ss_dssp HHHHHTTT--CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT--TCCEECSCCSHHHHHHHHHHHC
T ss_pred HHHHHHhC--CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc--CCCcceeeechhhHhhcccCCC
Confidence 44555554 556789999999999999999987 458999999 8889888864 23333322211 11 3
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHH
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDW 251 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~ 251 (279)
.||+|++.+++|++++ ...+|++++++|+ |||.+++........ .. ...+..........++.+++
T Consensus 171 ~fD~I~~~~vl~h~~d--~~~~l~~~~r~Lk---pgG~l~i~~~~~~~~-------~~--~~~~~~~~~~~~~~~s~~~l 236 (416)
T 4e2x_A 171 PANVIYAANTLCHIPY--VQSVLEGVDALLA---PDGVFVFEDPYLGDI-------VA--KTSFDQIFDEHFFLFSATSV 236 (416)
T ss_dssp CEEEEEEESCGGGCTT--HHHHHHHHHHHEE---EEEEEEEEEECHHHH-------HH--HTCGGGCSTTCCEECCHHHH
T ss_pred CEEEEEECChHHhcCC--HHHHHHHHHHHcC---CCeEEEEEeCChHHh-------hh--hcchhhhhhhhhhcCCHHHH
Confidence 5999999999999986 4688999999999 799998865432210 00 00011111123445699999
Q ss_pred HHHHHHCCCceeEEEecC
Q 023625 252 KKLFLAAGFSHYKITPML 269 (279)
Q Consensus 252 ~~ll~~aGf~~~~~~~~~ 269 (279)
.++++++||+++++...+
T Consensus 237 ~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 237 QGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHcCCEEEEEEEcc
Confidence 999999999999988765
No 89
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.54 E-value=2.3e-13 Score=105.98 Aligned_cols=127 Identities=9% Similarity=0.162 Sum_probs=99.8
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCC--ccceeeehhhhccCChh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIP--QANAVLLKWILHNWNDE 188 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~--~~D~v~~~~vlh~~~~~ 188 (279)
.+..+|||+|||+|.++..++++. +++++|+ +.+++. ..+++++.+|+.++.+ .||+|++...+|..++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~----~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES----HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT----CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc----ccCCeEEECChhhhcccCCCCEEEECCCCccCCcc
Confidence 456799999999999999999986 9999999 888877 3789999999988654 59999998888865443
Q ss_pred -------HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCc
Q 023625 189 -------ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFS 261 (279)
Q Consensus 189 -------~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~ 261 (279)
+...+++++.+.+ | ||++++++... .+.+++.++++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-p---gG~l~~~~~~~----------------------------~~~~~l~~~l~~~gf~ 142 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-T---VGMLYLLVIEA----------------------------NRPKEVLARLEERGYG 142 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-C---SSEEEEEEEGG----------------------------GCHHHHHHHHHHTTCE
T ss_pred ccccCCcchHHHHHHHHhhC-C---CCEEEEEEecC----------------------------CCHHHHHHHHHHCCCc
Confidence 4467888898888 4 89998876321 1467889999999999
Q ss_pred eeEEEec-CCceeEEEE
Q 023625 262 HYKITPM-LGVRSLIEA 277 (279)
Q Consensus 262 ~~~~~~~-~~~~~~i~~ 277 (279)
...+... .+...++..
T Consensus 143 ~~~~~~~~~~~e~~~~~ 159 (170)
T 3q87_B 143 TRILKVRKILGETVYII 159 (170)
T ss_dssp EEEEEEEECSSSEEEEE
T ss_pred EEEEEeeccCCceEEEE
Confidence 8888654 344444443
No 90
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.52 E-value=1.9e-14 Score=121.71 Aligned_cols=139 Identities=12% Similarity=0.151 Sum_probs=96.8
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-C---C------------------------------
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-N---D------------------------------ 157 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~---~------------------------------ 157 (279)
+..+|||||||+|.++ .++...+..+++++|+ +.+++.|++. . .
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 5689999999999944 3444445569999999 8888776541 0 0
Q ss_pred -CeEEeeCCCCC--C-----CC--ccceeeehhhhccCChh--HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCch
Q 023625 158 -NLDFLGGNMFE--A-----IP--QANAVLLKWILHNWNDE--ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKE 225 (279)
Q Consensus 158 -ri~~~~~d~~~--~-----~~--~~D~v~~~~vlh~~~~~--~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~ 225 (279)
.++++.+|+.+ + .+ .||+|++..+||+++++ +..++|++++++|+ |||++++.+......
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lk---pGG~l~~~~~~~~~~----- 221 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLR---PGGHLLLIGALEESW----- 221 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE---EEEEEEEEEEESCCE-----
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcC---CCCEEEEEEecCcce-----
Confidence 14566678876 2 12 29999999999986543 67899999999999 799999986432110
Q ss_pred hhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEec
Q 023625 226 SMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 226 ~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
.. ..+. ......++.++|.++|+++||+++++...
T Consensus 222 ---~~-~~~~----~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 222 ---YL-AGEA----RLTVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp ---EE-ETTE----EEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ---EE-cCCe----eeeeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 00 0000 00122358999999999999998887644
No 91
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.51 E-value=1.3e-13 Score=110.17 Aligned_cols=134 Identities=12% Similarity=0.065 Sum_probs=100.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----CCCeEEeeCCCCC-CCC--ccceeeehhhhc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----NDNLDFLGGNMFE-AIP--QANAVLLKWILH 183 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh 183 (279)
++. +|||||||+|.++..+++. +.+++++|+ +.+++.+++. ..++++..+|+.+ +.+ .||+|++. +.
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~ 103 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FC 103 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CC
T ss_pred CCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hh
Confidence 345 9999999999999999987 569999999 8888887742 2489999999987 544 59999984 34
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCcee
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHY 263 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~ 263 (279)
+++.++..++|+++.++|+ |||.+++.+......... .... ......++.+++.++|+ ||+++
T Consensus 104 ~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 104 HLPSSLRQQLYPKVYQGLK---PGGVFILEGFAPEQLQYN---------TGGP---KDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp CCCHHHHHHHHHHHHTTCC---SSEEEEEEEECTTTGGGT---------SCCS---SSGGGCCCHHHHHHHCS--SSCEE
T ss_pred cCCHHHHHHHHHHHHHhcC---CCcEEEEEEeccccccCC---------CCCC---CcceeecCHHHHHHHhc--CceEE
Confidence 4577788999999999999 799999887654321100 0000 00123459999999999 99998
Q ss_pred EEEe
Q 023625 264 KITP 267 (279)
Q Consensus 264 ~~~~ 267 (279)
++..
T Consensus 167 ~~~~ 170 (202)
T 2kw5_A 167 IANN 170 (202)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 92
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.51 E-value=2.4e-13 Score=111.13 Aligned_cols=141 Identities=13% Similarity=0.182 Sum_probs=100.8
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc---CCCCeEEeeCCCCCC-----C-Cccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG---TNDNLDFLGGNMFEA-----I-PQANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~ri~~~~~d~~~~-----~-~~~D~v~~~~ 180 (279)
+.+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.+++ ..+++.++.+|+.++ . ..||+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~--- 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY--- 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE---
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE---
Confidence 45678999999999999999999988789999999 888876543 127899999998762 2 2599998
Q ss_pred hhccCChh-HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCC
Q 023625 181 ILHNWNDE-ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 259 (279)
Q Consensus 181 vlh~~~~~-~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aG 259 (279)
|++++. +...+|+++.++|+ |||++++. ..........+. . ....+++. +|+++|
T Consensus 149 --~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~-~~~~~~~~~~~~---------~--------~~~~~~l~-~l~~~G 204 (230)
T 1fbn_A 149 --EDVAQPNQAEILIKNAKWFLK---KGGYGMIA-IKARSIDVTKDP---------K--------EIFKEQKE-ILEAGG 204 (230)
T ss_dssp --ECCCSTTHHHHHHHHHHHHEE---EEEEEEEE-EEGGGTCSSSCH---------H--------HHHHHHHH-HHHHHT
T ss_pred --EecCChhHHHHHHHHHHHhCC---CCcEEEEE-EecCCCCCCCCH---------H--------HhhHHHHH-HHHHCC
Confidence 454443 34567999999999 79999887 221111111000 0 00236777 899999
Q ss_pred CceeEEEecCCc---eeEEEEe
Q 023625 260 FSHYKITPMLGV---RSLIEAY 278 (279)
Q Consensus 260 f~~~~~~~~~~~---~~~i~~~ 278 (279)
|+.+++.++... ..++.++
T Consensus 205 f~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 205 FKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp EEEEEEEECTTTSTTEEEEEEE
T ss_pred CEEEEEEccCCCccceEEEEEE
Confidence 999998887654 5555554
No 93
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.51 E-value=1.3e-13 Score=114.11 Aligned_cols=143 Identities=17% Similarity=0.266 Sum_probs=101.6
Q ss_pred CCCCEEEEecCCc--cHHHHHH-HHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCC---------Ccc
Q 023625 112 EGLKSLVDVAGGT--GIMARAI-ATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAI---------PQA 173 (279)
Q Consensus 112 ~~~~~vlDvG~G~--G~~~~~l-~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~---------~~~ 173 (279)
.+..+|||||||+ +.++.++ .+..|+++++++|. |.+++.|+.. ..+++|+.+|+.++. ..+
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 3567999999997 3344444 45689999999999 9999998851 247999999998731 125
Q ss_pred c-----eeeehhhhccCChhH-HHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCC
Q 023625 174 N-----AVLLKWILHNWNDEE-SVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERS 247 (279)
Q Consensus 174 D-----~v~~~~vlh~~~~~~-~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~ 247 (279)
| ++++..+||++++++ ...+|++++++|+ |||.|++.+...+.. +. ......+.+-........|+
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~---PGG~Lvls~~~~d~~----p~-~~~~~~~~~~~~g~p~~~rs 228 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLP---SGSYLAMSIGTAEFA----PQ-EVGRVAREYAARNMPMRLRT 228 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSC---TTCEEEEEEECCTTS----HH-HHHHHHHHHHHTTCCCCCCC
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCC---CCcEEEEEeccCCCC----HH-HHHHHHHHHHhcCCCCccCC
Confidence 5 588899999999976 5789999999999 799999888664421 11 01111121111112345689
Q ss_pred HHHHHHHHHHCCCceeE
Q 023625 248 VDDWKKLFLAAGFSHYK 264 (279)
Q Consensus 248 ~~e~~~ll~~aGf~~~~ 264 (279)
.+|+.++|. ||++++
T Consensus 229 ~~ei~~~f~--Glelve 243 (277)
T 3giw_A 229 HAEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHHHTTT--TSEECT
T ss_pred HHHHHHHhC--CCcccC
Confidence 999999995 998654
No 94
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.50 E-value=1.6e-13 Score=110.98 Aligned_cols=143 Identities=11% Similarity=0.012 Sum_probs=94.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhh----ccc-----CCCCeEEeeCCCCC-CCC-ccceee-
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDN----LQG-----TNDNLDFLGGNMFE-AIP-QANAVL- 177 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~----a~~-----~~~ri~~~~~d~~~-~~~-~~D~v~- 177 (279)
..+..+|||||||+|.++..+++.+|..+++++|+ +.+++. +++ ..++++++.+|+.+ +.+ +.|.|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~ 104 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHV 104 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEE
Confidence 45678999999999999999999999999999999 776664 221 23589999999987 544 225554
Q ss_pred --ehhhhc--cCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHH
Q 023625 178 --LKWILH--NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKK 253 (279)
Q Consensus 178 --~~~vlh--~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ 253 (279)
....+| +.++. ..+|++++++|+ |||++++.-....-.... + . ..++. ........+++..
T Consensus 105 ~~~~~~~~~~~~~~~--~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~-~--~---~~~~~----~~~~~~~~~~l~~ 169 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSS--PEMLRGMAAVCR---PGASFLVALNLHAWRPSV-P--E---VGEHP----EPTPDSADEWLAP 169 (218)
T ss_dssp ESCCHHHHHHHHTSS--SHHHHHHHHTEE---EEEEEEEEEEGGGBTTBC-G--G---GTTCC----CCCHHHHHHHHHH
T ss_pred EccchhhhhhhhccH--HHHHHHHHHHcC---CCcEEEEEeccccccccc-c--c---cccCC----ccchHHHHHHHHH
Confidence 222332 34443 578999999999 799988843221111000 0 0 00000 0011123456888
Q ss_pred HHHHCCCceeEEEec
Q 023625 254 LFLAAGFSHYKITPM 268 (279)
Q Consensus 254 ll~~aGf~~~~~~~~ 268 (279)
+++++||++.++..+
T Consensus 170 ~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 170 RYAEAGWKLADCRYL 184 (218)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHcCCCceeeecc
Confidence 999999999887654
No 95
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.49 E-value=7.8e-13 Score=111.02 Aligned_cols=135 Identities=19% Similarity=0.256 Sum_probs=105.1
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCC--Cccceeeeh----
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAI--PQANAVLLK---- 179 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~--~~~D~v~~~---- 179 (279)
.+..+|||+|||+|..+..+++.+|..+++++|+ +.+++.+++. ..+++++.+|+.++. ..||+|++.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 3567999999999999999999999999999999 8888887741 247999999998854 359999997
Q ss_pred ---------hhhccCCh----------hHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhh
Q 023625 180 ---------WILHNWND----------EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSL 240 (279)
Q Consensus 180 ---------~vlh~~~~----------~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~ 240 (279)
.++++.+. +....+++++.+.|+ |||.+++...
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lk---pgG~l~~~~~------------------------- 239 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV---SGGFLLLEHG------------------------- 239 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE---EEEEEEEECC-------------------------
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcC---CCCEEEEEEC-------------------------
Confidence 34443331 345789999999999 7998877410
Q ss_pred cCCeeCCHHHHHHHHHHCCCceeEEEe-cCCceeEEEEe
Q 023625 241 FRGKERSVDDWKKLFLAAGFSHYKITP-MLGVRSLIEAY 278 (279)
Q Consensus 241 ~~~~~r~~~e~~~ll~~aGf~~~~~~~-~~~~~~~i~~~ 278 (279)
..+.+++.++++++||+.+++.. ..+...++.++
T Consensus 240 ----~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 240 ----WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGR 274 (276)
T ss_dssp ----SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEE
T ss_pred ----chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEE
Confidence 01467899999999999877754 56777776665
No 96
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.48 E-value=1.3e-13 Score=112.36 Aligned_cols=146 Identities=12% Similarity=0.085 Sum_probs=91.4
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHH-hh---ccc-----CCCCeEEeeCCCCC-CCCccceeeehh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVV-DN---LQG-----TNDNLDFLGGNMFE-AIPQANAVLLKW 180 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~---a~~-----~~~ri~~~~~d~~~-~~~~~D~v~~~~ 180 (279)
.+..+|||||||+|.++..++++.|+.+++++|+ ++.+ +. |++ ...+++++.+|..+ +...+|.|.+..
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 4678999999999999999999999999999999 3554 33 353 12579999999876 321245554444
Q ss_pred hhccCChh------HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeC-CHHHHHH
Q 023625 181 ILHNWNDE------ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKER-SVDDWKK 253 (279)
Q Consensus 181 vlh~~~~~------~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r-~~~e~~~ 253 (279)
+.+.|+.. +...+|++++++|| |||++++....... ....+. ...+... ....+ ..+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~Lk---pGG~l~i~~~~~~~-~~~~~~----~~~~~~~----~~~~~~~~~el~~ 170 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAK---KEAHFEFVTTYSDS-YEEAEI----KKRGLPL----LSKAYFLSEQYKA 170 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEE---EEEEEEEEECCCC-----------------------CCHHHHHSHHHHH
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcC---CCcEEEEEEecccc-chhchh----hhcCCCC----CChhhcchHHHHH
Confidence 43333321 11367999999999 79999985433322 111000 0000000 00011 2235999
Q ss_pred HHHHCCCceeEEEecC
Q 023625 254 LFLAAGFSHYKITPML 269 (279)
Q Consensus 254 ll~~aGf~~~~~~~~~ 269 (279)
+++++||++.++...+
T Consensus 171 ~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 171 ELSNSGFRIDDVKELD 186 (225)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCCeeeeeecC
Confidence 9999999988876554
No 97
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.47 E-value=3.3e-13 Score=105.45 Aligned_cols=117 Identities=15% Similarity=0.222 Sum_probs=91.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCC----Cccceeeeh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAI----PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~----~~~D~v~~~ 179 (279)
..+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.+++ ..+++ ++.+|..+.. +.||+|++.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 45678999999999999999999999999999999 888888773 23478 8888886532 459999999
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCC
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 259 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aG 259 (279)
.++|+ ..+++++.++|+ |||++++.+...+ +..++.+++++.|
T Consensus 102 ~~~~~------~~~l~~~~~~L~---~gG~l~~~~~~~~----------------------------~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 102 GGLTA------PGVFAAAWKRLP---VGGRLVANAVTVE----------------------------SEQMLWALRKQFG 144 (178)
T ss_dssp C-TTC------TTHHHHHHHTCC---TTCEEEEEECSHH----------------------------HHHHHHHHHHHHC
T ss_pred CcccH------HHHHHHHHHhcC---CCCEEEEEeeccc----------------------------cHHHHHHHHHHcC
Confidence 99875 467999999999 7999987663221 2345667788888
Q ss_pred CceeEE
Q 023625 260 FSHYKI 265 (279)
Q Consensus 260 f~~~~~ 265 (279)
+...++
T Consensus 145 ~~~~~~ 150 (178)
T 3hm2_A 145 GTISSF 150 (178)
T ss_dssp CEEEEE
T ss_pred CeeEEE
Confidence 776554
No 98
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.47 E-value=7.9e-14 Score=112.20 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=95.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCC-eEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC--ccceeeehhhhccCC
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDI-KCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP--QANAVLLKWILHNWN 186 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~~~ 186 (279)
.+..+|||||||+|.++..+ +. +++++|+ +.+++.+++...+++++.+|+.+ +.+ .||+|++..++|+++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC
Confidence 36789999999999999877 45 8999999 88888887644789999999987 544 499999999999987
Q ss_pred hhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhh---hhhcCCeeCCHHHHHHHHHHCC
Q 023625 187 DEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILM---VSLFRGKERSVDDWKKLFLAAG 259 (279)
Q Consensus 187 ~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~r~~~e~~~ll~~aG 259 (279)
+. .++|++++++|+ |||.+++.+..... +. ......... ......+.++.++++++|+ |
T Consensus 110 ~~--~~~l~~~~~~L~---pgG~l~i~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 110 DV--ERVLLEARRVLR---PGGALVVGVLEALS-----PW--AALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp CH--HHHHHHHHHHEE---EEEEEEEEEECTTS-----HH--HHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred CH--HHHHHHHHHHcC---CCCEEEEEecCCcC-----cH--HHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 64 589999999999 79999988754321 11 000000000 0001234569999999999 7
No 99
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.46 E-value=6.7e-13 Score=123.69 Aligned_cols=100 Identities=11% Similarity=0.148 Sum_probs=86.2
Q ss_pred CCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhccc-----------CCCCeEEeeCCCCC-CCC--ccce
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQG-----------TNDNLDFLGGNMFE-AIP--QANA 175 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~ri~~~~~d~~~-~~~--~~D~ 175 (279)
.+..+|||||||+|.++..+++.. |..+++++|+ +.+++.|++ ...+++++.+|+.+ +.+ .||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 467899999999999999999998 5679999999 888988864 22579999999987 443 5999
Q ss_pred eeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 176 VLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 176 v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
|++..++|++++++...+++++.++|+ || .+++...
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLK---PG-~LIISTP 835 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFH---PK-LLIVSTP 835 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTC---CS-EEEEEEC
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcC---CC-EEEEEec
Confidence 999999999999988899999999999 67 6666554
No 100
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.46 E-value=6.1e-14 Score=112.85 Aligned_cols=136 Identities=15% Similarity=0.190 Sum_probs=87.6
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----CCCeEEeeCCCCCC--C-----Cccceeeeh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----NDNLDFLGGNMFEA--I-----PQANAVLLK 179 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~ri~~~~~d~~~~--~-----~~~D~v~~~ 179 (279)
.+..+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++. ..+++++.+|+.++ . ..||+|++.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 5678999999999999999999999999999999 8888888753 12788999998763 2 459999995
Q ss_pred hh------hccCChhHH------------------HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcch
Q 023625 180 WI------LHNWNDEES------------------VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDI 235 (279)
Q Consensus 180 ~v------lh~~~~~~~------------------~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~ 235 (279)
-. ++.++++.. ..+++++.++|+ |||++++++...
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~------------------ 167 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLA---RGRAGVFLEVGH------------------ 167 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBC---SSSEEEEEECTT------------------
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhc---CCCeEEEEEECC------------------
Confidence 33 333333222 688999999999 799966655311
Q ss_pred hhhhhcCCeeCCHHHHHHHHH--HCCCceeEEEec-CCceeEEEEe
Q 023625 236 LMVSLFRGKERSVDDWKKLFL--AAGFSHYKITPM-LGVRSLIEAY 278 (279)
Q Consensus 236 ~~~~~~~~~~r~~~e~~~ll~--~aGf~~~~~~~~-~~~~~~i~~~ 278 (279)
...+++.++++ ++||..+++... .+...++.++
T Consensus 168 ----------~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~ 203 (215)
T 4dzr_A 168 ----------NQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVT 203 (215)
T ss_dssp ----------SCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEE
T ss_pred ----------ccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEE
Confidence 13567788889 899988777654 4444555443
No 101
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.46 E-value=2.4e-13 Score=109.79 Aligned_cols=100 Identities=10% Similarity=0.236 Sum_probs=84.6
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-CCC-ccceeeehhhhcc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-AIP-QANAVLLKWILHN 184 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~ 184 (279)
..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .||+|++..++|+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 3456799999999999999999885 58999999 8888888752 2589999999988 322 5999999999999
Q ss_pred CCh-hHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 185 WND-EESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 185 ~~~-~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+++ ++..++|++++++|+ |||.+++...
T Consensus 127 ~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~ 155 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLA---PGGHLVFGSA 155 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEE---EEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcC---CCCEEEEEec
Confidence 986 566789999999999 7999988664
No 102
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.45 E-value=4e-13 Score=112.22 Aligned_cols=97 Identities=16% Similarity=0.282 Sum_probs=81.7
Q ss_pred CCCEEEEecCCccH----HHHHHHHHCC----CCeEEEeeC-hhHHhhcccC--------------------------C-
Q 023625 113 GLKSLVDVAGGTGI----MARAIATAFP----DIKCTVFDL-PHVVDNLQGT--------------------------N- 156 (279)
Q Consensus 113 ~~~~vlDvG~G~G~----~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~--------------------------~- 156 (279)
+..+|+|+|||+|. +++.+++..| +.++++.|+ +.+++.|++. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 6666777655 468999999 9999888742 0
Q ss_pred ---------CCeEEeeCCCCC-CCC---ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 157 ---------DNLDFLGGNMFE-AIP---QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 157 ---------~ri~~~~~d~~~-~~~---~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
.+|.|..+|+.+ +.+ .||+|+++++|++++++...+++++++++|+ |||.+++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~---pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLK---PDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEE---EEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhC---CCcEEEE
Confidence 269999999998 454 5999999999999999888999999999999 7998876
No 103
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.45 E-value=1.4e-12 Score=105.09 Aligned_cols=137 Identities=15% Similarity=0.147 Sum_probs=94.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhH----HhhcccCCCCeEEeeCCCCCC-----CC-ccceeeeh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHV----VDNLQGTNDNLDFLGGNMFEA-----IP-QANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~----~~~a~~~~~ri~~~~~d~~~~-----~~-~~D~v~~~ 179 (279)
..++.+|||||||+|.++..+++..+..+++++|+ +.+ .+.++.. .++.++.+|...+ .+ .||+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIVEKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccccceeEEEEe
Confidence 45678999999999999999999988779999999 654 3444444 5788998988753 22 59999986
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHH----HHHH
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDW----KKLF 255 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~----~~ll 255 (279)
+.+ +++...+|++++++|+ |||++++.-...+... ..+.+++ .+.+
T Consensus 134 -~~~---~~~~~~~l~~~~r~Lk---pgG~l~i~~~~~~~~~-----------------------~~~~~~~~~~~~~~l 183 (210)
T 1nt2_A 134 -IAQ---KNQIEILKANAEFFLK---EKGEVVIMVKARSIDS-----------------------TAEPEEVFKSVLKEM 183 (210)
T ss_dssp -CCS---TTHHHHHHHHHHHHEE---EEEEEEEEEEHHHHCT-----------------------TSCHHHHHHHHHHHH
T ss_pred -ccC---hhHHHHHHHHHHHHhC---CCCEEEEEEecCCccc-----------------------cCCHHHHHHHHHHHH
Confidence 222 2344566999999999 7999998732211000 0022232 1237
Q ss_pred HHCCCceeEEEecCC---ceeEEEEeC
Q 023625 256 LAAGFSHYKITPMLG---VRSLIEAYP 279 (279)
Q Consensus 256 ~~aGf~~~~~~~~~~---~~~~i~~~~ 279 (279)
+++ |++.+.....+ .+.++.+++
T Consensus 184 ~~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 184 EGD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp HTT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred Hhh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 888 99999887733 345666653
No 104
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.45 E-value=1.8e-13 Score=118.93 Aligned_cols=113 Identities=13% Similarity=0.148 Sum_probs=90.0
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-------------C-CCCeEEeeCC
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-------------T-NDNLDFLGGN 165 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------~-~~ri~~~~~d 165 (279)
..+++.+. ..+..+|||||||+|..+..+++..+..+++++|+ +.+++.|+. . .++|+|+.+|
T Consensus 163 ~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 163 AQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 34555444 56788999999999999999999887667999999 777766653 1 2689999999
Q ss_pred CCC-CC----CccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCC
Q 023625 166 MFE-AI----PQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQS 221 (279)
Q Consensus 166 ~~~-~~----~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~ 221 (279)
+.+ +. ..+|+|++..+++ . ++....|+++.++|+ |||+|++.|.+.++..
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~F--~-pdl~~aL~Ei~RvLK---PGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFAF--G-PEVDHQLKERFANMK---EGGRIVSSKPFAPLNF 295 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTTC--C-HHHHHHHHHHHTTSC---TTCEEEESSCSSCTTC
T ss_pred ccCCccccccCCccEEEEccccc--C-chHHHHHHHHHHcCC---CCcEEEEeecccCCCC
Confidence 998 54 3599999877764 2 345677899999999 7999999999887654
No 105
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.45 E-value=1.1e-12 Score=103.54 Aligned_cols=140 Identities=12% Similarity=0.287 Sum_probs=103.4
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCC-CeEEeeCCCCCCCC--
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TND-NLDFLGGNMFEAIP-- 171 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~-ri~~~~~d~~~~~~-- 171 (279)
.+++.+. ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.++. ... |++++.+|+.++.+
T Consensus 43 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 43 ILVENVV--VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred HHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 3444443 456789999999999999999998 779999999 888887764 212 59999999988543
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHH
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDW 251 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~ 251 (279)
.||+|++..++|. ..+....+++++.++|+ |||.+++...... ...++
T Consensus 119 ~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~---~gG~l~~~~~~~~----------------------------~~~~~ 166 (194)
T 1dus_A 119 KYNKIITNPPIRA-GKEVLHRIIEEGKELLK---DNGEIWVVIQTKQ----------------------------GAKSL 166 (194)
T ss_dssp CEEEEEECCCSTT-CHHHHHHHHHHHHHHEE---EEEEEEEEEESTH----------------------------HHHHH
T ss_pred CceEEEECCCccc-chhHHHHHHHHHHHHcC---CCCEEEEEECCCC----------------------------ChHHH
Confidence 5999999888773 45667899999999999 7999988764311 12356
Q ss_pred HHHHHHCCCceeEEEecCCceeEEEEe
Q 023625 252 KKLFLAAGFSHYKITPMLGVRSLIEAY 278 (279)
Q Consensus 252 ~~ll~~aGf~~~~~~~~~~~~~~i~~~ 278 (279)
.+.+++. |..+++........++.++
T Consensus 167 ~~~l~~~-~~~~~~~~~~~~~~~~~~~ 192 (194)
T 1dus_A 167 AKYMKDV-FGNVETVTIKGGYRVLKSK 192 (194)
T ss_dssp HHHHHHH-HSCCEEEEEETTEEEEEEE
T ss_pred HHHHHHH-hcceEEEecCCcEEEEEEe
Confidence 7777777 6666666655444555554
No 106
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.45 E-value=2.4e-14 Score=117.61 Aligned_cols=134 Identities=16% Similarity=0.123 Sum_probs=91.5
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC---CCC--ccceeee---
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE---AIP--QANAVLL--- 178 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~---~~~--~~D~v~~--- 178 (279)
.++.+|||||||+|..+..+++..|. +++++|+ |.+++.|++ ...++.++.+|... +.+ .||.|++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 56789999999999999999987774 7999999 999998874 34678888888643 233 4887764
Q ss_pred --hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHH
Q 023625 179 --KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFL 256 (279)
Q Consensus 179 --~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~ 256 (279)
...++++.+ ...++++++++|| |||++++.+....... ....+.... ....+.+...|.
T Consensus 138 ~~~~~~~~~~~--~~~~~~e~~rvLk---PGG~l~f~~~~~~~~~------~~~~~~~~~--------~~~~~~~~~~L~ 198 (236)
T 3orh_A 138 PLSEETWHTHQ--FNFIKNHAFRLLK---PGGVLTYCNLTSWGEL------MKSKYSDIT--------IMFEETQVPALL 198 (236)
T ss_dssp CCBGGGTTTHH--HHHHHHTHHHHEE---EEEEEEECCHHHHHHH------TTTTCSCHH--------HHHHHHTHHHHH
T ss_pred ecccchhhhcc--hhhhhhhhhheeC---CCCEEEEEecCCchhh------hhhhhhhhh--------hhhHHHHHHHHH
Confidence 445554444 5688999999999 7999887653221100 000000011 012456677889
Q ss_pred HCCCceeEE
Q 023625 257 AAGFSHYKI 265 (279)
Q Consensus 257 ~aGf~~~~~ 265 (279)
++||++..+
T Consensus 199 eaGF~~~~i 207 (236)
T 3orh_A 199 EAGFRRENI 207 (236)
T ss_dssp HHTCCGGGE
T ss_pred HcCCeEEEE
Confidence 999986654
No 107
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.43 E-value=3.3e-12 Score=111.83 Aligned_cols=97 Identities=5% Similarity=0.050 Sum_probs=79.8
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCCC-----ccceeeehhh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAIP-----QANAVLLKWI 181 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~~-----~~D~v~~~~v 181 (279)
+..+|||+| |+|.++..+++..|..+++++|+ +.+++.|++. ..+++++.+|+.++.+ .||+|++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 468999999 99999999999988889999999 8999888741 1389999999987432 5999999876
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
++.. ....+|+++.++|+ |||++++++..
T Consensus 251 ~~~~---~~~~~l~~~~~~Lk---pgG~~~~~~~~ 279 (373)
T 2qm3_A 251 ETLE---AIRAFVGRGIATLK---GPRCAGYFGIT 279 (373)
T ss_dssp SSHH---HHHHHHHHHHHTBC---STTCEEEEEEC
T ss_pred CchH---HHHHHHHHHHHHcc---cCCeEEEEEEe
Confidence 6543 24789999999999 79977666654
No 108
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.43 E-value=1.1e-12 Score=108.70 Aligned_cols=127 Identities=17% Similarity=0.234 Sum_probs=101.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCCCC--Cccceeeehhhhc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFEAI--PQANAVLLKWILH 183 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~~~--~~~D~v~~~~vlh 183 (279)
..+..+|||+|||+|.++..+++..+ +++++|+ +.+++.+++ ..-.+++..+|+.++. ..||+|++....|
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH
Confidence 35678999999999999999998765 9999999 888888774 1112899999987643 3599999865443
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCcee
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHY 263 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~ 263 (279)
....+++++.+.|+ |||++++.+.... +.+++.++++++||+++
T Consensus 196 -----~~~~~l~~~~~~Lk---pgG~lils~~~~~----------------------------~~~~v~~~l~~~Gf~~~ 239 (254)
T 2nxc_A 196 -----LHAALAPRYREALV---PGGRALLTGILKD----------------------------RAPLVREAMAGAGFRPL 239 (254)
T ss_dssp -----HHHHHHHHHHHHEE---EEEEEEEEEEEGG----------------------------GHHHHHHHHHHTTCEEE
T ss_pred -----HHHHHHHHHHHHcC---CCCEEEEEeeccC----------------------------CHHHHHHHHHHCCCEEE
Confidence 35688999999999 7999988654321 35789999999999999
Q ss_pred EEEecCCceeEE
Q 023625 264 KITPMLGVRSLI 275 (279)
Q Consensus 264 ~~~~~~~~~~~i 275 (279)
++....++.+++
T Consensus 240 ~~~~~~~W~~l~ 251 (254)
T 2nxc_A 240 EEAAEGEWVLLA 251 (254)
T ss_dssp EEEEETTEEEEE
T ss_pred EEeccCCeEEEE
Confidence 998888887764
No 109
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.42 E-value=1.1e-12 Score=107.28 Aligned_cols=139 Identities=6% Similarity=0.097 Sum_probs=95.6
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhH----HhhcccCCCCeEEeeCCCCCC--C----Cccceeee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHV----VDNLQGTNDNLDFLGGNMFEA--I----PQANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~----~~~a~~~~~ri~~~~~d~~~~--~----~~~D~v~~ 178 (279)
+.+..+|||+|||+|.++..+++.+ |..+++++|+ +.+ ++.++.. .+++++.+|+.++ . ..||+|++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 4567899999999999999999986 7789999999 654 3444444 7899999999872 2 25999998
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCC-CCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHH
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIEN-QSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLA 257 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~ 257 (279)
... ..+....+++++.++|+ |||.+++. ..... ....++ . .. -..+ .++|++
T Consensus 154 ~~~----~~~~~~~~~~~~~~~Lk---pgG~l~i~-~~~~~~~~~~~~---~------~~---------~~~~-~~~l~~ 206 (233)
T 2ipx_A 154 DVA----QPDQTRIVALNAHTFLR---NGGHFVIS-IKANCIDSTASA---E------AV---------FASE-VKKMQQ 206 (233)
T ss_dssp CCC----CTTHHHHHHHHHHHHEE---EEEEEEEE-EEHHHHCSSSCH---H------HH---------HHHH-HHTTGG
T ss_pred cCC----CccHHHHHHHHHHHHcC---CCeEEEEE-EcccccccCCCH---H------HH---------HHHH-HHHHHH
Confidence 433 33445677999999999 79988883 22110 100000 0 00 1123 588999
Q ss_pred CCCceeEEEecCCc---eeEEEE
Q 023625 258 AGFSHYKITPMLGV---RSLIEA 277 (279)
Q Consensus 258 aGf~~~~~~~~~~~---~~~i~~ 277 (279)
+||+++++..+..+ ..++.+
T Consensus 207 ~Gf~~~~~~~~~~~~~~~~~v~~ 229 (233)
T 2ipx_A 207 ENMKPQEQLTLEPYERDHAVVVG 229 (233)
T ss_dssp GTEEEEEEEECTTTSSSEEEEEE
T ss_pred CCCceEEEEecCCccCCcEEEEE
Confidence 99999987766433 444444
No 110
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.42 E-value=1.4e-12 Score=105.91 Aligned_cols=142 Identities=11% Similarity=0.121 Sum_probs=99.6
Q ss_pred hCCCCEEEEecCCccHHHHHHHHH-CCCCeEEEeeC-hhHHhhccc---CCCCeEEeeCCCCCCC------Cccceeeeh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATA-FPDIKCTVFDL-PHVVDNLQG---TNDNLDFLGGNMFEAI------PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~---~~~ri~~~~~d~~~~~------~~~D~v~~~ 179 (279)
++++.+|||+|||+|.++..+++. .|+-+++++|. +.+++.+++ ...++..+.+|...+. ..+|+|++.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 678999999999999999999997 48889999999 888877653 2367888988887631 148888753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCC
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 259 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aG 259 (279)
. ++ + ++...++++++++|| |||+++|+..........++ + ...++-.+.|+++|
T Consensus 155 ~--~~-~-~~~~~~l~~~~r~LK---pGG~lvI~ik~r~~d~~~p~------------------~-~~~~~ev~~L~~~G 208 (233)
T 4df3_A 155 V--AQ-P-EQAAIVVRNARFFLR---DGGYMLMAIKARSIDVTTEP------------------S-EVYKREIKTLMDGG 208 (233)
T ss_dssp C--CC-T-THHHHHHHHHHHHEE---EEEEEEEEEECCHHHHHTCC------------------C-HHHHHHHHHHHHTT
T ss_pred c--cC-C-hhHHHHHHHHHHhcc---CCCEEEEEEecccCCCCCCh------------------H-HHHHHHHHHHHHCC
Confidence 2 22 2 245678999999999 79999986532221110000 0 01123456789999
Q ss_pred CceeEEEecCCc---eeEEEEe
Q 023625 260 FSHYKITPMLGV---RSLIEAY 278 (279)
Q Consensus 260 f~~~~~~~~~~~---~~~i~~~ 278 (279)
|+.++...+.++ +.++.++
T Consensus 209 F~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 209 LEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp CCEEEEEECTTTSTTEEEEEEC
T ss_pred CEEEEEEccCCCCCceEEEEEE
Confidence 999998887543 5565554
No 111
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.41 E-value=3.2e-12 Score=102.45 Aligned_cols=116 Identities=18% Similarity=0.214 Sum_probs=91.4
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC---CCccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA---IPQANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~---~~~~D~v~~~~ 180 (279)
..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|++ ..++++++.+|+.+. .+.||+|++..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 456789999999999999999998 779999999 888888774 234899999999872 34699999876
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
.+ + .. +++++.++|+ |||++++...... +..++.+++++.|+
T Consensus 131 ~~----~--~~-~l~~~~~~Lk---pgG~lv~~~~~~~----------------------------~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 131 GG----S--QA-LYDRLWEWLA---PGTRIVANAVTLE----------------------------SETLLTQLHARHGG 172 (204)
T ss_dssp CC----C--HH-HHHHHHHHSC---TTCEEEEEECSHH----------------------------HHHHHHHHHHHHCS
T ss_pred cc----c--HH-HHHHHHHhcC---CCcEEEEEecCcc----------------------------cHHHHHHHHHhCCC
Confidence 44 1 23 8999999999 7999887553210 34577888999998
Q ss_pred ceeEEE
Q 023625 261 SHYKIT 266 (279)
Q Consensus 261 ~~~~~~ 266 (279)
++.++.
T Consensus 173 ~i~~i~ 178 (204)
T 3njr_A 173 QLLRID 178 (204)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 877663
No 112
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.41 E-value=5.7e-13 Score=107.15 Aligned_cols=102 Identities=17% Similarity=0.175 Sum_probs=85.2
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-CCC--ccceeeehhhhc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-AIP--QANAVLLKWILH 183 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh 183 (279)
..+..+|||||||+|.++..+++..+. +++++|+ +.+++.+++. ..++++..+|+.+ +.+ .||+|++..++|
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 356789999999999999999998665 8999999 8888887752 2589999999987 544 599999988887
Q ss_pred cCC-------------hhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 184 NWN-------------DEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 184 ~~~-------------~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.+. .++..++|+++.++|+ |||++++.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~li~~~~~ 161 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLV---PGGRFISMTSA 161 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEE---EEEEEEEEESC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCc---CCCEEEEEeCC
Confidence 665 4566899999999999 79999998753
No 113
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.41 E-value=4.1e-12 Score=102.66 Aligned_cols=131 Identities=9% Similarity=0.050 Sum_probs=102.3
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCCC---ccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAIP---QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~~---~~D~v~~~~ 180 (279)
.+++.+|+|||||+|.+++.+++..|..+++++|+ +..++.|++ ..+++++..+|.+++++ .||+|++..
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 34668999999999999999999999999999999 888888874 35689999999988654 499998765
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
+ .-+-...+|..+.+.|+ |+|++++ .+.. ..+.++++|.+.||
T Consensus 93 ~----Gg~~i~~Il~~~~~~L~---~~~~lVl-q~~~-----------------------------~~~~vr~~L~~~Gf 135 (225)
T 3kr9_A 93 M----GGRLIARILEEGLGKLA---NVERLIL-QPNN-----------------------------REDDLRIWLQDHGF 135 (225)
T ss_dssp E----CHHHHHHHHHHTGGGCT---TCCEEEE-EESS-----------------------------CHHHHHHHHHHTTE
T ss_pred C----ChHHHHHHHHHHHHHhC---CCCEEEE-ECCC-----------------------------CHHHHHHHHHHCCC
Confidence 4 33446789999999999 6887766 3220 34578899999999
Q ss_pred ceeEEEe---cCCceeEEEEe
Q 023625 261 SHYKITP---MLGVRSLIEAY 278 (279)
Q Consensus 261 ~~~~~~~---~~~~~~~i~~~ 278 (279)
.+++..- -..++.+|.+.
T Consensus 136 ~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 136 QIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp EEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEE
Confidence 9886642 23456777664
No 114
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.41 E-value=1e-12 Score=111.73 Aligned_cols=152 Identities=14% Similarity=0.145 Sum_probs=99.0
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----CC-------CeEEeeCCCCC---------CCC
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----ND-------NLDFLGGNMFE---------AIP 171 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~-------ri~~~~~d~~~---------~~~ 171 (279)
+..+|||||||+|..+..+++. ...+++++|+ +.+++.|++. .. +++|...|+.. +.+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4679999999999877766664 3468999999 9999988741 11 26787887722 122
Q ss_pred --ccceeeehhhhcc-CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCC----------c-hhhh-h-hhh---
Q 023625 172 --QANAVLLKWILHN-WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQD----------K-ESME-T-QLC--- 232 (279)
Q Consensus 172 --~~D~v~~~~vlh~-~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~----------~-~~~~-~-~~~--- 232 (279)
.||+|++..++|. +.+++..++|++++++|+ |||.+++........... . +... . ...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lk---pGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 203 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTA---SGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIA 203 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEE---EEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcC---CCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccc
Confidence 5999999999986 454556799999999999 799998876532110000 0 0000 0 000
Q ss_pred cch--hhhhh---cC--CeeCCHHHHHHHHHHCCCceeEEEec
Q 023625 233 FDI--LMVSL---FR--GKERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 233 ~d~--~~~~~---~~--~~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
.+. .+.-. .. ....+.+++.++++++||++++....
T Consensus 204 ~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 204 DDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp TTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred ccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 000 00000 01 12357899999999999999887653
No 115
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.41 E-value=4e-13 Score=111.37 Aligned_cols=126 Identities=12% Similarity=0.210 Sum_probs=98.1
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHH-CCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCCC--
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATA-FPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAIP-- 171 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~~-- 171 (279)
.++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.|++ ..+++++..+|+.+..+
T Consensus 84 ~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (255)
T 3mb5_A 84 LIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEE 161 (255)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCC
T ss_pred HHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCC
Confidence 3444443 567889999999999999999999 88999999999 888888774 34679999999987654
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHH
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDW 251 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~ 251 (279)
.||+|++ +.++. ..+++++.++|+ |||++++...... ...++
T Consensus 162 ~~D~v~~-----~~~~~--~~~l~~~~~~L~---~gG~l~~~~~~~~----------------------------~~~~~ 203 (255)
T 3mb5_A 162 NVDHVIL-----DLPQP--ERVVEHAAKALK---PGGFFVAYTPCSN----------------------------QVMRL 203 (255)
T ss_dssp SEEEEEE-----CSSCG--GGGHHHHHHHEE---EEEEEEEEESSHH----------------------------HHHHH
T ss_pred CcCEEEE-----CCCCH--HHHHHHHHHHcC---CCCEEEEEECCHH----------------------------HHHHH
Confidence 4999997 23443 467999999999 7999988653210 24567
Q ss_pred HHHHHHCC--CceeEEEe
Q 023625 252 KKLFLAAG--FSHYKITP 267 (279)
Q Consensus 252 ~~ll~~aG--f~~~~~~~ 267 (279)
.+++++.| |..+++..
T Consensus 204 ~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 204 HEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp HHHHHHTGGGBSCCEEEC
T ss_pred HHHHHHcCCCccccEEEE
Confidence 78889999 98877654
No 116
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.40 E-value=7.8e-13 Score=109.57 Aligned_cols=107 Identities=16% Similarity=0.125 Sum_probs=81.2
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCC-C-Ce--EEeeCCC--CCC-CCc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTN-D-NL--DFLGGNM--FEA-IPQ 172 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~-ri--~~~~~d~--~~~-~~~ 172 (279)
..+++.++ ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++.. . .+ .+...+. ... ...
T Consensus 35 ~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 35 ENDIFLEN--IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGH 110 (261)
T ss_dssp HHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTC
T ss_pred HHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCC
Confidence 44555554 567789999999999999999987 468999999 88999887521 1 12 2222232 011 135
Q ss_pred cceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 173 ANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
||+|++..++|++++++...+++++.++| | ||++++...
T Consensus 111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-P---GG~l~lS~~ 149 (261)
T 3iv6_A 111 FDFVLNDRLINRFTTEEARRACLGMLSLV-G---SGTVRASVK 149 (261)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHH-T---TSEEEEEEE
T ss_pred ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-c---CcEEEEEec
Confidence 99999999999999999999999999999 6 899887643
No 117
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.39 E-value=3.1e-13 Score=110.10 Aligned_cols=115 Identities=10% Similarity=0.139 Sum_probs=90.2
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC--CCC---ccceeeehhhhccC
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE--AIP---QANAVLLKWILHNW 185 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~--~~~---~~D~v~~~~vlh~~ 185 (279)
.+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++..++++++.+|+.+ +.+ .||+|++..
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~----- 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR----- 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES-----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC-----
Confidence 56789999999999999999998 579999999 89999888655789999999965 333 599999861
Q ss_pred ChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEE
Q 023625 186 NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKI 265 (279)
Q Consensus 186 ~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~ 265 (279)
+...+|++++++|+ |||+++... ...+.+++.++++++||...++
T Consensus 120 ---~~~~~l~~~~~~Lk---pgG~l~~~~-----------------------------~~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 120 ---GPTSVILRLPELAA---PDAHFLYVG-----------------------------PRLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp ---CCSGGGGGHHHHEE---EEEEEEEEE-----------------------------SSSCCTHHHHHHHHTTCEEEEE
T ss_pred ---CHHHHHHHHHHHcC---CCcEEEEeC-----------------------------CcCCHHHHHHHHHHCCCeEEEE
Confidence 23467999999999 799888100 0113457888899999988776
Q ss_pred Eec
Q 023625 266 TPM 268 (279)
Q Consensus 266 ~~~ 268 (279)
...
T Consensus 165 ~~~ 167 (226)
T 3m33_A 165 DHV 167 (226)
T ss_dssp EEE
T ss_pred Eee
Confidence 543
No 118
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=1.2e-13 Score=113.30 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=78.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC---CCC--ccceeee-hh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE---AIP--QANAVLL-KW 180 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~---~~~--~~D~v~~-~~ 180 (279)
.+..+|||||||+|.++..+++..+ .+++++|+ +.+++.|++ ...+++++.+|+.+ +.+ .||+|++ .+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4578999999999999999976544 48999999 888888774 23679999999865 343 4999998 44
Q ss_pred h--hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 181 I--LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 181 v--lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
. .+.+...+...++++++++|+ |||++++++..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~Lk---pgG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLK---PGGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEE---EEEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcC---CCeEEEEEecC
Confidence 4 444445555688999999999 79999887643
No 119
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.39 E-value=1.4e-12 Score=109.30 Aligned_cols=95 Identities=9% Similarity=0.216 Sum_probs=79.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCCccceeeehhhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIPQANAVLLKWIL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~~~D~v~~~~vl 182 (279)
..+..+|||||||+|.++..++.+.++++++++|+ +.+++.|++ . ++++|+.+|..+ +...||+|++....
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~ 198 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAALA 198 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTC
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCCc
Confidence 56789999999999988877777778999999999 999998874 4 799999999987 43469999986542
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+ +..++++++.++|+ |||++++.+
T Consensus 199 ---~--d~~~~l~el~r~Lk---PGG~Lvv~~ 222 (298)
T 3fpf_A 199 ---E--PKRRVFRNIHRYVD---TETRIIYRT 222 (298)
T ss_dssp ---S--CHHHHHHHHHHHCC---TTCEEEEEE
T ss_pred ---c--CHHHHHHHHHHHcC---CCcEEEEEc
Confidence 2 34689999999999 799999876
No 120
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.39 E-value=5.5e-13 Score=111.91 Aligned_cols=125 Identities=16% Similarity=0.169 Sum_probs=94.3
Q ss_pred HHHhchhhhCCCCEEEEecCCccHHHHHHHHH-CCCCeEEEeeC-hhHHhhcccC------CCCeEEeeCCCCCCCC--c
Q 023625 103 VIKDCKEVFEGLKSLVDVAGGTGIMARAIATA-FPDIKCTVFDL-PHVVDNLQGT------NDNLDFLGGNMFEAIP--Q 172 (279)
Q Consensus 103 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~------~~ri~~~~~d~~~~~~--~ 172 (279)
++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++. .+++++..+|+.++.+ .
T Consensus 102 ~~~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 102 IIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQM 179 (275)
T ss_dssp ----CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCC
T ss_pred HHHHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCC
Confidence 444443 567789999999999999999998 78899999999 8888877641 2589999999988554 4
Q ss_pred cceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHH
Q 023625 173 ANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWK 252 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~ 252 (279)
||+|++ ++++. .++|+++.++|+ |||++++...... ..+++.
T Consensus 180 fD~Vi~-----~~~~~--~~~l~~~~~~Lk---pgG~l~i~~~~~~----------------------------~~~~~~ 221 (275)
T 1yb2_A 180 YDAVIA-----DIPDP--WNHVQKIASMMK---PGSVATFYLPNFD----------------------------QSEKTV 221 (275)
T ss_dssp EEEEEE-----CCSCG--GGSHHHHHHTEE---EEEEEEEEESSHH----------------------------HHHHHH
T ss_pred ccEEEE-----cCcCH--HHHHHHHHHHcC---CCCEEEEEeCCHH----------------------------HHHHHH
Confidence 999998 33443 378999999999 7999998763210 234566
Q ss_pred HHHHHCCCceeEEEe
Q 023625 253 KLFLAAGFSHYKITP 267 (279)
Q Consensus 253 ~ll~~aGf~~~~~~~ 267 (279)
+.++++||+.+++..
T Consensus 222 ~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 222 LSLSASGMHHLETVE 236 (275)
T ss_dssp HHSGGGTEEEEEEEE
T ss_pred HHHHHCCCeEEEEEE
Confidence 777888888777654
No 121
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.38 E-value=1e-12 Score=107.98 Aligned_cols=121 Identities=18% Similarity=0.251 Sum_probs=93.3
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC-CC-----Cccceeeeh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE-AI-----PQANAVLLK 179 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~-~~-----~~~D~v~~~ 179 (279)
.+..+|||||||+|..+..+++..|..+++++|+ +.+++.+++ ...+++++.+|+.+ +. ..||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 4578999999999999999999899999999999 888887764 12469999999865 32 259999987
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCC
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 259 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aG 259 (279)
.+ . +...+++.+.++|+ |||.+++..... . . ...+++.+.+++.|
T Consensus 149 ~~----~--~~~~~l~~~~~~Lk---pgG~l~~~~g~~-----~----~-----------------~~~~~~~~~l~~~g 193 (240)
T 1xdz_A 149 AV----A--RLSVLSELCLPLVK---KNGLFVALKAAS-----A----E-----------------EELNAGKKAITTLG 193 (240)
T ss_dssp CC----S--CHHHHHHHHGGGEE---EEEEEEEEECC------C----H-----------------HHHHHHHHHHHHTT
T ss_pred cc----C--CHHHHHHHHHHhcC---CCCEEEEEeCCC-----c----h-----------------HHHHHHHHHHHHcC
Confidence 63 2 25689999999999 799998753110 0 0 02346778899999
Q ss_pred CceeEEEe
Q 023625 260 FSHYKITP 267 (279)
Q Consensus 260 f~~~~~~~ 267 (279)
|...++..
T Consensus 194 ~~~~~~~~ 201 (240)
T 1xdz_A 194 GELENIHS 201 (240)
T ss_dssp EEEEEEEE
T ss_pred CeEeEEEE
Confidence 99887754
No 122
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.38 E-value=5.8e-12 Score=101.95 Aligned_cols=131 Identities=9% Similarity=-0.003 Sum_probs=102.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCC-C--ccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAI-P--QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~-~--~~D~v~~~~ 180 (279)
.+++.+|+|||||+|.+++.+++..|..+++++|+ +..++.|++ ..+++++..+|.++.. + .||+|++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 35678999999999999999999998889999999 888888874 3578999999999854 3 499998765
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
+. -+-...+|....+.|+ ++|++++.- .. ..+++++++.+.||
T Consensus 99 mG----g~lI~~IL~~~~~~l~---~~~~lIlqp-~~-----------------------------~~~~lr~~L~~~Gf 141 (230)
T 3lec_A 99 MG----GRLIADILNNDIDKLQ---HVKTLVLQP-NN-----------------------------REDDLRKWLAANDF 141 (230)
T ss_dssp EC----HHHHHHHHHHTGGGGT---TCCEEEEEE-SS-----------------------------CHHHHHHHHHHTTE
T ss_pred Cc----hHHHHHHHHHHHHHhC---cCCEEEEEC-CC-----------------------------ChHHHHHHHHHCCC
Confidence 43 3456789999999998 678766532 10 35678999999999
Q ss_pred ceeEEEec---CCceeEEEEe
Q 023625 261 SHYKITPM---LGVRSLIEAY 278 (279)
Q Consensus 261 ~~~~~~~~---~~~~~~i~~~ 278 (279)
.+.+..-+ ..++.+|.+.
T Consensus 142 ~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 142 EIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp EEEEEEEEEC--CEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEE
Confidence 98876532 3466777765
No 123
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.38 E-value=3.7e-12 Score=102.79 Aligned_cols=99 Identities=18% Similarity=0.237 Sum_probs=78.0
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-C--CC--ccceeeehhh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-A--IP--QANAVLLKWI 181 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~--~~--~~D~v~~~~v 181 (279)
+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++. .++++++.+|+.+ + .+ .+|+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 467999999999999999999999999999999 8888887641 2689999999986 3 33 4999998754
Q ss_pred hccCChh------HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 182 LHNWNDE------ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 182 lh~~~~~------~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.+..... ....+|+++.++|+ |||.+++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~ 156 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILP---ENGEIHFKT 156 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSC---TTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcC---CCcEEEEEe
Confidence 3211100 12478999999999 799988743
No 124
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.38 E-value=5.9e-14 Score=116.38 Aligned_cols=145 Identities=14% Similarity=0.110 Sum_probs=95.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCC----CCCC-----cccee
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMF----EAIP-----QANAV 176 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~----~~~~-----~~D~v 176 (279)
+..+|||+|||+|.++..++++.|..+++++|+ +.+++.|++ ..++++++.+|.. ++.+ .||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 567999999999999999999988899999999 889888774 2457999999853 2333 59999
Q ss_pred eehhhhccCCh-------------hHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCC
Q 023625 177 LLKWILHNWND-------------EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRG 243 (279)
Q Consensus 177 ~~~~vlh~~~~-------------~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 243 (279)
++.-..|.... +....++.+++++|+ |||.+.+++.+.... ........+.....+
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lk---pgG~l~~~~~~~~~~--------~~~l~~~g~~~~~~~ 213 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMA---EGGELEFVKRIIHDS--------LQLKKRLRWYSCMLG 213 (254)
T ss_dssp EECCCCC-------------------------CTTTTHH---HHTHHHHHHHHHHHH--------HHHGGGBSCEEEEES
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEe---cCCEEEEEHHHHHHH--------HhcccceEEEEECCC
Confidence 99755554331 112356788899999 799888776543210 000000001111113
Q ss_pred eeCCHHHHHHHHHHCCCceeEEEec
Q 023625 244 KERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 244 ~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
...+.+++.++++++||+.+++...
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred ChhHHHHHHHHHHHcCCCceEEEEE
Confidence 3345688999999999998887665
No 125
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.37 E-value=4.5e-12 Score=103.30 Aligned_cols=130 Identities=20% Similarity=0.219 Sum_probs=96.3
Q ss_pred hCCCCEEEEecCC-ccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCC--CCCC--ccceeeehh
Q 023625 111 FEGLKSLVDVAGG-TGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMF--EAIP--QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~--~~~~--~~D~v~~~~ 180 (279)
..+..+|||+||| +|.++..+++.. ..+++++|+ +.+++.+++ ...+++++.+|.. .+.+ .||+|++.-
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 4567899999999 999999999986 678999999 888888874 2238999999963 3443 599999876
Q ss_pred hhccCChh-----------------HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCC
Q 023625 181 ILHNWNDE-----------------ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRG 243 (279)
Q Consensus 181 vlh~~~~~-----------------~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 243 (279)
..+..++. ....+++++.+.|+ |||+++++-....
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~------------------------- 183 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLN---PGGKVALYLPDKE------------------------- 183 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEE---EEEEEEEEEESCH-------------------------
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhC---CCeEEEEEecccH-------------------------
Confidence 65543332 13689999999999 7999988532100
Q ss_pred eeCCHHHHHHHHHHCCCceeEEEecCCc
Q 023625 244 KERSVDDWKKLFLAAGFSHYKITPMLGV 271 (279)
Q Consensus 244 ~~r~~~e~~~ll~~aGf~~~~~~~~~~~ 271 (279)
...+++.+++++.||.+..+....+.
T Consensus 184 --~~~~~~~~~l~~~g~~~~~~~~~~g~ 209 (230)
T 3evz_A 184 --KLLNVIKERGIKLGYSVKDIKFKVGT 209 (230)
T ss_dssp --HHHHHHHHHHHHTTCEEEEEEECCCC
T ss_pred --hHHHHHHHHHHHcCCceEEEEecCCC
Confidence 03467889999999987776555443
No 126
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.37 E-value=9.6e-12 Score=101.22 Aligned_cols=141 Identities=11% Similarity=0.062 Sum_probs=93.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHH----hhcccCCCCeEEeeCCCCCCC------Cccceeee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVV----DNLQGTNDNLDFLGGNMFEAI------PQANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~----~~a~~~~~ri~~~~~d~~~~~------~~~D~v~~ 178 (279)
+.++.+|||+|||+|.++..+++.. |+.+++++|+ +.++ +.+++. .++.++.+|...+. ..||+|++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEe
Confidence 5678999999999999999999874 6789999999 7554 344444 68999999987631 25999987
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHC
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAA 258 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~a 258 (279)
.... +++...+++++.+.|+ |||++++........... .-.+ ..++..+.|+++
T Consensus 153 d~a~----~~~~~il~~~~~~~Lk---pGG~lvisik~~~~d~t~------------------~~~e-~~~~~~~~L~~~ 206 (232)
T 3id6_C 153 DIAQ----PDQTDIAIYNAKFFLK---VNGDMLLVIKARSIDVTK------------------DPKE-IYKTEVEKLENS 206 (232)
T ss_dssp CCCC----TTHHHHHHHHHHHHEE---EEEEEEEEEC-------C------------------CSSS-STTHHHHHHHHT
T ss_pred cCCC----hhHHHHHHHHHHHhCC---CCeEEEEEEccCCcccCC------------------CHHH-HHHHHHHHHHHC
Confidence 6432 2233344566667999 799999873221111000 0001 112344677889
Q ss_pred CCceeEEEecCCc---eeEEEEe
Q 023625 259 GFSHYKITPMLGV---RSLIEAY 278 (279)
Q Consensus 259 Gf~~~~~~~~~~~---~~~i~~~ 278 (279)
||++.+...+.+. +.++.++
T Consensus 207 gf~~~~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 207 NFETIQIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp TEEEEEEEECTTTCSSCEEEEEE
T ss_pred CCEEEEEeccCCCcCceEEEEEE
Confidence 9999999888443 5666554
No 127
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.37 E-value=1.6e-11 Score=99.80 Aligned_cols=141 Identities=13% Similarity=0.125 Sum_probs=98.1
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcc----cCCCCeEEeeCCCCCC-----CC-ccceeee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQ----GTNDNLDFLGGNMFEA-----IP-QANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~----~~~~ri~~~~~d~~~~-----~~-~~D~v~~ 178 (279)
..+..+|||+|||+|.++..+++.. |..+++++|. +.+++.++ .. ++++++.+|+.++ .+ .||+|++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEEE
Confidence 4567899999999999999999885 6689999999 76555443 34 7899999999862 23 5999996
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHC
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAA 258 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~a 258 (279)
... .++....+++++.++|+ |||.+++. ..........+ . .....+++..+ +++
T Consensus 150 ~~~----~~~~~~~~l~~~~~~Lk---pgG~l~~~-~~~~~~~~~~~---------~--------~~~~~~~l~~l-~~~ 203 (227)
T 1g8a_A 150 DVA----QPTQAKILIDNAEVYLK---RGGYGMIA-VKSRSIDVTKE---------P--------EQVFREVEREL-SEY 203 (227)
T ss_dssp CCC----STTHHHHHHHHHHHHEE---EEEEEEEE-EEGGGTCTTSC---------H--------HHHHHHHHHHH-HTT
T ss_pred CCC----CHhHHHHHHHHHHHhcC---CCCEEEEE-EecCCCCCCCC---------h--------hhhhHHHHHHH-Hhh
Confidence 543 23334456999999999 79999887 22211111100 0 01145677777 777
Q ss_pred CCceeEEEecCCc---eeEEEEeC
Q 023625 259 GFSHYKITPMLGV---RSLIEAYP 279 (279)
Q Consensus 259 Gf~~~~~~~~~~~---~~~i~~~~ 279 (279)
|++++...+... ..++.+++
T Consensus 204 -f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 204 -FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp -SEEEEEEECTTTSSSEEEEEEEC
T ss_pred -ceeeeEeccCcccCCCEEEEEEe
Confidence 999988887544 55565553
No 128
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.37 E-value=2e-12 Score=102.82 Aligned_cols=103 Identities=17% Similarity=0.223 Sum_probs=81.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccC------CCCeEEeeCCCCC-C-C-C-ccceeee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQGT------NDNLDFLGGNMFE-A-I-P-QANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~------~~ri~~~~~d~~~-~-~-~-~~D~v~~ 178 (279)
..+..+|||+|||+|.++..+++.+ |..+++++|+ +.+++.+++. .++++++.+|+.+ + . + .||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 4567899999999999999999986 6779999999 8888888742 3689999999865 2 2 2 5999998
Q ss_pred hhhhc-------cCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 179 KWILH-------NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 179 ~~vlh-------~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
...+. ....++..++++++.++|+ |||++++....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---~gG~l~~~~~~ 141 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLV---TGGIITVVIYY 141 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEE---EEEEEEEEECC
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCc---CCCEEEEEEcc
Confidence 76441 1123355679999999999 79999987643
No 129
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.37 E-value=2.2e-12 Score=109.76 Aligned_cols=130 Identities=12% Similarity=0.144 Sum_probs=94.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCC-C----CCcccee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFE-A----IPQANAV 176 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~-~----~~~~D~v 176 (279)
+...+|||||||+|.++..+++..+..+++++|+ +.+++.+++. .+|++++.+|..+ . ...||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999999999999999878889999999 8888877641 3689999999875 2 2259999
Q ss_pred eehhhhccCChhHH--HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHH
Q 023625 177 LLKWILHNWNDEES--VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKL 254 (279)
Q Consensus 177 ~~~~vlh~~~~~~~--~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~l 254 (279)
++....+..++... .+++++++++|+ |||.+++.... + +.+ .....++.+.
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~Lk---pgG~lv~~~~~--------~------~~~----------~~~~~~~~~~ 226 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILK---PDGICCNQGES--------I------WLD----------LELIEKMSRF 226 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEE---EEEEEEEEECC--------T------TTC----------HHHHHHHHHH
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcC---CCcEEEEecCC--------c------ccc----------hHHHHHHHHH
Confidence 99766665444322 588999999999 79988876321 0 000 1145678899
Q ss_pred HHHCCCceeEEEec
Q 023625 255 FLAAGFSHYKITPM 268 (279)
Q Consensus 255 l~~aGf~~~~~~~~ 268 (279)
++++||..+++...
T Consensus 227 l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 227 IRETGFASVQYALM 240 (304)
T ss_dssp HHHHTCSEEEEEEC
T ss_pred HHhCCCCcEEEEEe
Confidence 99999998887654
No 130
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.36 E-value=4e-12 Score=99.06 Aligned_cols=97 Identities=15% Similarity=0.084 Sum_probs=77.3
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC-ccceeeehhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP-QANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~~D~v~~~~v 181 (279)
+++..+|||+|||+|.++..++...|+.+++++|+ +.+++.+++ ...++++ .|..+ +.+ .||+|++..+
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 46688999999999999999999999999999999 999988874 2225555 66655 333 5999999999
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+|.+ ++ ....+.++.++|+ |||.++-.+
T Consensus 125 LHlL-~~-~~~al~~v~~~L~---pggvfISfp 152 (200)
T 3fzg_A 125 LPVL-KQ-QDVNILDFLQLFH---TQNFVISFP 152 (200)
T ss_dssp HHHH-HH-TTCCHHHHHHTCE---EEEEEEEEE
T ss_pred HHhh-hh-hHHHHHHHHHHhC---CCCEEEEeC
Confidence 9999 43 3455669999999 677655554
No 131
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.36 E-value=4.6e-12 Score=108.23 Aligned_cols=100 Identities=16% Similarity=0.125 Sum_probs=82.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------------CCCCeEEeeCCCCC-C----C--C
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------------TNDNLDFLGGNMFE-A----I--P 171 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~ri~~~~~d~~~-~----~--~ 171 (279)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ ...+++++.+|+.+ + + +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 46789999999999999999884 6779999999 888887763 12378999999976 3 3 2
Q ss_pred --ccceeeehhhhccC--ChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 172 --QANAVLLKWILHNW--NDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 172 --~~D~v~~~~vlh~~--~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.||+|++..++|.. +.++...+|++++++|+ |||.+++...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lk---pgG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLS---PGGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEE---EEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhC---CCcEEEEecC
Confidence 59999999999976 44667899999999999 7999888765
No 132
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.36 E-value=2.9e-12 Score=100.80 Aligned_cols=100 Identities=15% Similarity=0.211 Sum_probs=76.6
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-C-C-C-ccceeeeh-
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-A-I-P-QANAVLLK- 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~-~-~-~~D~v~~~- 179 (279)
..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|++. .++++++..|... + . + .||+|++.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 456789999999999999999988 789999999 8899888741 2789999977654 1 2 3 49999876
Q ss_pred hhhcc------CChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 180 WILHN------WNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 180 ~vlh~------~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
..++. ...++...+|+++.++|+ |||+++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~ 136 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLE---VGGRLAIMIY 136 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEE---EEEEEEEEEC
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcC---CCcEEEEEEe
Confidence 23321 023556788999999999 7999988764
No 133
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.36 E-value=5.6e-12 Score=99.34 Aligned_cols=114 Identities=20% Similarity=0.280 Sum_probs=90.8
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC--C-Cccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA--I-PQANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~--~-~~~D~v~~~~ 180 (279)
..+..+|||+|||+|.++..+++.. .+++++|. +.+++.+++ ..+++++..+|+.++ . +.||+|++..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGG 108 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECC
Confidence 4567899999999999999999987 78999999 888887764 126899999998662 2 4699999988
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
++|+ ...+++++.++|+ |||.+++...... +..++.+++++.||
T Consensus 109 ~~~~-----~~~~l~~~~~~l~---~gG~l~~~~~~~~----------------------------~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 109 SGGE-----LQEILRIIKDKLK---PGGRIIVTAILLE----------------------------TKFEAMECLRDLGF 152 (192)
T ss_dssp CTTC-----HHHHHHHHHHTEE---EEEEEEEEECBHH----------------------------HHHHHHHHHHHTTC
T ss_pred chHH-----HHHHHHHHHHhcC---CCcEEEEEecCcc----------------------------hHHHHHHHHHHCCC
Confidence 7753 3678999999999 7999888653210 34578889999999
Q ss_pred ce
Q 023625 261 SH 262 (279)
Q Consensus 261 ~~ 262 (279)
.+
T Consensus 153 ~~ 154 (192)
T 1l3i_A 153 DV 154 (192)
T ss_dssp CC
T ss_pred ce
Confidence 43
No 134
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.35 E-value=2.5e-12 Score=103.06 Aligned_cols=92 Identities=17% Similarity=0.265 Sum_probs=75.7
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCCCC--Cccceeeehhhhcc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFEAI--PQANAVLLKWILHN 184 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~~~--~~~D~v~~~~vlh~ 184 (279)
+..+|||+|||+|.++..+++.+|..+++++|. +.+++.++. ...++++..+|+.+.. ..||+|++..+ +
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~-~- 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF-A- 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS-S-
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc-C-
Confidence 467999999999999999999999999999999 888887764 1235999999998733 35999997542 2
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
....+++++.++|+ |||.+++.
T Consensus 143 ----~~~~~l~~~~~~L~---~gG~l~~~ 164 (207)
T 1jsx_A 143 ----SLNDMVSWCHHLPG---EQGRFYAL 164 (207)
T ss_dssp ----SHHHHHHHHTTSEE---EEEEEEEE
T ss_pred ----CHHHHHHHHHHhcC---CCcEEEEE
Confidence 24588999999999 79988886
No 135
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.35 E-value=1.4e-12 Score=107.79 Aligned_cols=122 Identities=11% Similarity=0.096 Sum_probs=93.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC-CC-----Cccceeeeh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE-AI-----PQANAVLLK 179 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~-~~-----~~~D~v~~~ 179 (279)
.+..+|||||||+|..+..++..+|+.+++++|+ +.+++.+++ .-.+++++.+|+.+ +. ..||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 3568999999999999999999999999999999 888887774 12469999999876 32 359999987
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCC
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 259 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aG 259 (279)
.+- + ...+++.+.+.|+ |||++++....... . ...++...+++.|
T Consensus 159 a~~----~--~~~ll~~~~~~Lk---pgG~l~~~~g~~~~---~-----------------------e~~~~~~~l~~~G 203 (249)
T 3g89_A 159 AVA----P--LCVLSELLLPFLE---VGGAAVAMKGPRVE---E-----------------------ELAPLPPALERLG 203 (249)
T ss_dssp SSC----C--HHHHHHHHGGGEE---EEEEEEEEECSCCH---H-----------------------HHTTHHHHHHHHT
T ss_pred CcC----C--HHHHHHHHHHHcC---CCeEEEEEeCCCcH---H-----------------------HHHHHHHHHHHcC
Confidence 542 2 3578999999999 79998876522110 0 1235667788889
Q ss_pred CceeEEEec
Q 023625 260 FSHYKITPM 268 (279)
Q Consensus 260 f~~~~~~~~ 268 (279)
|.+.++.++
T Consensus 204 ~~~~~~~~~ 212 (249)
T 3g89_A 204 GRLGEVLAL 212 (249)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 998887654
No 136
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.35 E-value=1.2e-11 Score=102.80 Aligned_cols=125 Identities=13% Similarity=0.174 Sum_probs=94.6
Q ss_pred hC-CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-C--C--Cccceee
Q 023625 111 FE-GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-A--I--PQANAVL 177 (279)
Q Consensus 111 ~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~--~--~~~D~v~ 177 (279)
.. +..+|||+|||+|.++..++++.+. +++++|+ +.+++.|++ ..++++++.+|+.+ + . ..||+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 45 6789999999999999999999776 9999999 888888774 34689999999987 2 2 2599999
Q ss_pred ehhhhccC------------------ChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhh
Q 023625 178 LKWILHNW------------------NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVS 239 (279)
Q Consensus 178 ~~~vlh~~------------------~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~ 239 (279)
+.-.++.. .......+++.+.++|+ |||+++++- +..
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~---~~~------------------- 179 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLK---QGGKANFVH---RPE------------------- 179 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEE---EEEEEEEEE---CTT-------------------
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHcc---CCcEEEEEE---cHH-------------------
Confidence 95333211 11334679999999999 799998842 110
Q ss_pred hcCCeeCCHHHHHHHHHHCCCceeEEEec
Q 023625 240 LFRGKERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 240 ~~~~~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
...++..++++.||...++..+
T Consensus 180 -------~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 180 -------RLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp -------THHHHHHHHHHTTEEEEEEEEE
T ss_pred -------HHHHHHHHHHHCCCceEEEEEe
Confidence 3457888899999988877654
No 137
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.34 E-value=1.6e-12 Score=112.54 Aligned_cols=110 Identities=16% Similarity=0.314 Sum_probs=88.8
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCCCCC-ccc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFEAIP-QAN 174 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~~~~-~~D 174 (279)
..+++.++ .....+|||+|||+|.++..+++.+|..+++++|+ +.+++.+++ ....++++.+|+.+..+ .||
T Consensus 186 ~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD 263 (343)
T 2pjd_A 186 QLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFD 263 (343)
T ss_dssp HHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEE
T ss_pred HHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCee
Confidence 44555553 23467999999999999999999999999999999 888887774 23357789999987433 699
Q ss_pred eeeehhhhcc---CChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 175 AVLLKWILHN---WNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 175 ~v~~~~vlh~---~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+|++..++|. +..+...+++++++++|+ |||.++++..
T Consensus 264 ~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~ 304 (343)
T 2pjd_A 264 MIISNPPFHDGMQTSLDAAQTLIRGAVRHLN---SGGELRIVAN 304 (343)
T ss_dssp EEEECCCCCSSSHHHHHHHHHHHHHHGGGEE---EEEEEEEEEE
T ss_pred EEEECCCcccCccCCHHHHHHHHHHHHHhCC---CCcEEEEEEc
Confidence 9999999986 345667899999999999 7999998764
No 138
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.34 E-value=2.1e-12 Score=106.75 Aligned_cols=100 Identities=11% Similarity=0.195 Sum_probs=81.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC--C-C---Ccccee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE--A-I---PQANAV 176 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~--~-~---~~~D~v 176 (279)
..+..+|||||||+|..+..+++.+| ..+++++|+ +.+++.|++ ..++++++.+|..+ + . ..||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 45678999999999999999999998 789999999 888888774 34689999999865 2 2 259999
Q ss_pred eehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 177 LLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 177 ~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
++.. +......+++++.++|+ |||.|++.+....
T Consensus 141 ~~d~-----~~~~~~~~l~~~~~~Lk---pGG~lv~~~~~~~ 174 (248)
T 3tfw_A 141 FIDA-----DKPNNPHYLRWALRYSR---PGTLIIGDNVVRD 174 (248)
T ss_dssp EECS-----CGGGHHHHHHHHHHTCC---TTCEEEEECCSGG
T ss_pred EECC-----chHHHHHHHHHHHHhcC---CCeEEEEeCCCcC
Confidence 9844 34456789999999999 7998887665543
No 139
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.33 E-value=1.9e-11 Score=99.75 Aligned_cols=131 Identities=8% Similarity=0.038 Sum_probs=101.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCCC---ccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAIP---QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~~---~~D~v~~~~ 180 (279)
.+++.+|+|||||+|.+++.+++..|..+++++|+ +..++.|++ ..+++++..+|.++..+ .||+|++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 35678999999999999999999998889999999 888888874 35789999999998543 399998765
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
+ .-+-...+|....+.|+ +++++++.-. . ..+.++++|.+.||
T Consensus 99 m----Gg~lI~~IL~~~~~~L~---~~~~lIlq~~-~-----------------------------~~~~lr~~L~~~Gf 141 (244)
T 3gnl_A 99 M----GGTLIRTILEEGAAKLA---GVTKLILQPN-I-----------------------------AAWQLREWSEQNNW 141 (244)
T ss_dssp E----CHHHHHHHHHHTGGGGT---TCCEEEEEES-S-----------------------------CHHHHHHHHHHHTE
T ss_pred C----chHHHHHHHHHHHHHhC---CCCEEEEEcC-C-----------------------------ChHHHHHHHHHCCC
Confidence 4 33456789999999998 6777766321 0 34578899999999
Q ss_pred ceeEEEe---cCCceeEEEEe
Q 023625 261 SHYKITP---MLGVRSLIEAY 278 (279)
Q Consensus 261 ~~~~~~~---~~~~~~~i~~~ 278 (279)
.+++-.- -.-++.+|.+.
T Consensus 142 ~i~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 142 LITSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp EEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEE
Confidence 9865442 33456666654
No 140
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.32 E-value=6.2e-12 Score=113.23 Aligned_cols=106 Identities=15% Similarity=0.178 Sum_probs=86.1
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc------CCCCeEEeeCCCCC-CCC-c
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG------TNDNLDFLGGNMFE-AIP-Q 172 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~ 172 (279)
..+++.+. ..+..+|||||||+|.++..+++ .+..+++++|+.++++.|++ ..++++++.+|+.+ +.+ .
T Consensus 148 ~~il~~l~--~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~ 224 (480)
T 3b3j_A 148 RAILQNHT--DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 224 (480)
T ss_dssp HHHHHTGG--GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHhhh--hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCCC
Confidence 44555554 44568999999999999998887 57789999999557776663 34789999999988 555 5
Q ss_pred cceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 173 ANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
||+|++..++|++.+++....+.++++.|+ |||.+++
T Consensus 225 fD~Ivs~~~~~~~~~e~~~~~l~~~~~~Lk---pgG~li~ 261 (480)
T 3b3j_A 225 VDIIISEPMGYMLFNERMLESYLHAKKYLK---PSGNMFP 261 (480)
T ss_dssp EEEEECCCCHHHHTCHHHHHHHHHGGGGEE---EEEEEES
T ss_pred eEEEEEeCchHhcCcHHHHHHHHHHHHhcC---CCCEEEE
Confidence 999999888888887778888999999999 7998874
No 141
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.31 E-value=5.9e-12 Score=110.06 Aligned_cols=108 Identities=19% Similarity=0.316 Sum_probs=85.5
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC------C--CCeEEeeCCCCCCCC-
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT------N--DNLDFLGGNMFEAIP- 171 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~--~ri~~~~~d~~~~~~- 171 (279)
.+++.++ ..+..+|||+|||+|.++..+++.+|..+++++|. +.+++.+++. . .+++|..+|+.++.+
T Consensus 213 ~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~ 290 (375)
T 4dcm_A 213 FFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 290 (375)
T ss_dssp HHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCT
T ss_pred HHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCC
Confidence 3455554 33458999999999999999999999999999999 8888887741 1 258889999998655
Q ss_pred -ccceeeehhhhcc---CChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 172 -QANAVLLKWILHN---WNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 172 -~~D~v~~~~vlh~---~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.||+|++.-.+|. ..+....++++++.+.|+ |||+++++.
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~iv~ 334 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK---INGELYIVA 334 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEE---EEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCC---CCcEEEEEE
Confidence 5999999888874 345556689999999999 799999864
No 142
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.31 E-value=1.4e-11 Score=99.43 Aligned_cols=98 Identities=20% Similarity=0.320 Sum_probs=76.3
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC-C--CC--ccceeeehhh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE-A--IP--QANAVLLKWI 181 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~-~--~~--~~D~v~~~~v 181 (279)
+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ ...+++++.+|+.+ + ++ .+|.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 467999999999999999999999999999999 888887764 12579999999876 3 33 4898876433
Q ss_pred hccCChh-------HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 182 LHNWNDE-------ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 182 lh~~~~~-------~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.. |... ....+|+++.++|+ |||.+++..
T Consensus 118 ~p-~~~~~~~~~rl~~~~~l~~~~~~Lk---pgG~l~~~t 153 (213)
T 2fca_A 118 DP-WPKKRHEKRRLTYSHFLKKYEEVMG---KGGSIHFKT 153 (213)
T ss_dssp CC-CCSGGGGGGSTTSHHHHHHHHHHHT---TSCEEEEEE
T ss_pred CC-CcCccccccccCcHHHHHHHHHHcC---CCCEEEEEe
Confidence 21 2111 02578999999999 799988754
No 143
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.29 E-value=7.3e-12 Score=104.09 Aligned_cols=98 Identities=13% Similarity=0.191 Sum_probs=78.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC--ccceeeehhhhccCCh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP--QANAVLLKWILHNWND 187 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~~~~ 187 (279)
++..+|||||||+|.++..+++. ..+++++|+ +.+++.+++.... .++.+|+.+ +.+ .||+|++..+++++.+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhccc
Confidence 36789999999999999999987 568999999 8888888753222 388899877 544 5999999886655543
Q ss_pred hHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 188 EESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 188 ~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
+ ...+|++++++|+ |||++++....
T Consensus 130 ~-~~~~l~~~~~~Lk---pgG~l~~~~~~ 154 (260)
T 2avn_A 130 N-KDKAFSEIRRVLV---PDGLLIATVDN 154 (260)
T ss_dssp C-HHHHHHHHHHHEE---EEEEEEEEEEB
T ss_pred c-HHHHHHHHHHHcC---CCeEEEEEeCC
Confidence 3 6789999999999 79999887653
No 144
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.29 E-value=1.1e-11 Score=102.67 Aligned_cols=126 Identities=17% Similarity=0.170 Sum_probs=96.3
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHH-CCCCeEEEeeC-hhHHhhcccC------CCCeEEeeCCCCCC-CC-
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATA-FPDIKCTVFDL-PHVVDNLQGT------NDNLDFLGGNMFEA-IP- 171 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~------~~ri~~~~~d~~~~-~~- 171 (279)
.++..++ ..+..+|||+|||+|.++..+++. .|..+++++|. +.+++.+++. .+++++..+|+.+. .+
T Consensus 87 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 87 AMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 3555444 567889999999999999999998 67899999999 8888877642 36899999999873 54
Q ss_pred -ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHH
Q 023625 172 -QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDD 250 (279)
Q Consensus 172 -~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e 250 (279)
.||+|++ ++++. ..+|+++.++|+ |||++++...... ...+
T Consensus 165 ~~~D~v~~-----~~~~~--~~~l~~~~~~L~---~gG~l~~~~~~~~----------------------------~~~~ 206 (258)
T 2pwy_A 165 AAYDGVAL-----DLMEP--WKVLEKAALALK---PDRFLVAYLPNIT----------------------------QVLE 206 (258)
T ss_dssp TCEEEEEE-----ESSCG--GGGHHHHHHHEE---EEEEEEEEESCHH----------------------------HHHH
T ss_pred CCcCEEEE-----CCcCH--HHHHHHHHHhCC---CCCEEEEEeCCHH----------------------------HHHH
Confidence 4999997 23443 377999999999 7999998763210 1245
Q ss_pred HHHHHHHCCCceeEEEe
Q 023625 251 WKKLFLAAGFSHYKITP 267 (279)
Q Consensus 251 ~~~ll~~aGf~~~~~~~ 267 (279)
+.+.++++||..+++..
T Consensus 207 ~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 207 LVRAAEAHPFRLERVLE 223 (258)
T ss_dssp HHHHHTTTTEEEEEEEE
T ss_pred HHHHHHHCCCceEEEEE
Confidence 66777888998776654
No 145
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.28 E-value=1.7e-11 Score=108.34 Aligned_cols=111 Identities=19% Similarity=0.245 Sum_probs=85.4
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhc-------cc----C---CCCeEEeeCCC
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNL-------QG----T---NDNLDFLGGNM 166 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-------~~----~---~~ri~~~~~d~ 166 (279)
.+++.+. ..+..+|||||||+|.++..+++.++..+++++|+ +.+++.| +. . ..+++++.+|.
T Consensus 233 ~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 233 DVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 3444443 56778999999999999999999888778999999 7777766 42 1 26899998754
Q ss_pred C-CC------CCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCC
Q 023625 167 F-EA------IPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQ 220 (279)
Q Consensus 167 ~-~~------~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~ 220 (279)
+ .+ ...||+|++..+++ . ++....|+++.+.|+ |||++++.+...+..
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~l~--~-~d~~~~L~el~r~LK---pGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNFLF--D-EDLNKKVEKILQTAK---VGCKIISLKSLRSLT 365 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCTTC--C-HHHHHHHHHHHTTCC---TTCEEEESSCSSCTT
T ss_pred cccccccccccCCCCEEEEeCccc--c-ccHHHHHHHHHHhCC---CCeEEEEeeccCCcc
Confidence 4 32 23599999877763 2 345678999999999 799999998776654
No 146
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.28 E-value=1.8e-11 Score=100.33 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=78.4
Q ss_pred CCCEEEEecCCccHHHHHHHHH----CCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC--C---C--ccceeeehh
Q 023625 113 GLKSLVDVAGGTGIMARAIATA----FPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA--I---P--QANAVLLKW 180 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~--~---~--~~D~v~~~~ 180 (279)
+..+|||||||+|..+..+++. .|..+++++|+ +.+++.|+...++++++.+|..+. . . .||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 4579999999999999999998 78899999999 888888876557999999999762 1 2 499998755
Q ss_pred hhccCChhHHHHHHHHHHH-hCCCCCCCcEEEEEee
Q 023625 181 ILHNWNDEESVKLLKKCKE-AIPSKDEGGKVIIIDM 215 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~-~L~~~~pgG~lli~e~ 215 (279)
. |. +...+|+++.+ .|+ |||++++.+.
T Consensus 161 ~-~~----~~~~~l~~~~r~~Lk---pGG~lv~~d~ 188 (236)
T 2bm8_A 161 A-HA----NTFNIMKWAVDHLLE---EGDYFIIEDM 188 (236)
T ss_dssp S-CS----SHHHHHHHHHHHTCC---TTCEEEECSC
T ss_pred c-hH----hHHHHHHHHHHhhCC---CCCEEEEEeC
Confidence 4 52 35678999997 999 7999988664
No 147
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.28 E-value=3.3e-11 Score=101.22 Aligned_cols=122 Identities=15% Similarity=0.179 Sum_probs=94.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC-CC-ccceeeehhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA-IP-QANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~-~~-~~D~v~~~~v 181 (279)
..+..+|||+|||+|.++..+++..+. +++++|+ +.+++.|++ ..++++++.+|..+. .. .||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 356789999999999999999999876 8999999 888888763 345799999999883 33 5999988433
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCc
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFS 261 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~ 261 (279)
.....+++++.++|+ |||.+++.+....... .....+++.+.++++||+
T Consensus 202 ------~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~----------------------~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 202 ------VRTHEFIPKALSIAK---DGAIIHYHNTVPEKLM----------------------PREPFETFKRITKEYGYD 250 (278)
T ss_dssp ------SSGGGGHHHHHHHEE---EEEEEEEEEEEEGGGT----------------------TTTTHHHHHHHHHHTTCE
T ss_pred ------hhHHHHHHHHHHHCC---CCeEEEEEEeeccccc----------------------cccHHHHHHHHHHHcCCe
Confidence 223578999999999 7999998876532110 011457888999999998
Q ss_pred eeE
Q 023625 262 HYK 264 (279)
Q Consensus 262 ~~~ 264 (279)
...
T Consensus 251 ~~~ 253 (278)
T 2frn_A 251 VEK 253 (278)
T ss_dssp EEE
T ss_pred eEE
Confidence 766
No 148
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.27 E-value=1e-11 Score=101.61 Aligned_cols=101 Identities=17% Similarity=0.236 Sum_probs=79.9
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCCC---
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAIP--- 171 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~~--- 171 (279)
..+++.+. ..+..+|||||||+|.++..+++..+ .+++++|+ +.+++.+++. ..++++..+|+..+.+
T Consensus 81 ~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (235)
T 1jg1_A 81 AIMLEIAN--LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKA 157 (235)
T ss_dssp HHHHHHHT--CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCC
Confidence 44555444 56678999999999999999999988 89999998 8888887641 2469999999854543
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.||+|++..+++++.+ ++.+.|+ |||++++.-.
T Consensus 158 ~fD~Ii~~~~~~~~~~--------~~~~~L~---pgG~lvi~~~ 190 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPE--------PLIEQLK---IGGKLIIPVG 190 (235)
T ss_dssp CEEEEEECSBBSSCCH--------HHHHTEE---EEEEEEEEEC
T ss_pred CccEEEECCcHHHHHH--------HHHHhcC---CCcEEEEEEe
Confidence 3999999999987765 5678899 7998888553
No 149
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.27 E-value=6.2e-12 Score=102.01 Aligned_cols=100 Identities=11% Similarity=0.167 Sum_probs=80.4
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC---C-----Cccc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA---I-----PQAN 174 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~---~-----~~~D 174 (279)
..+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.+++ ..++++++.+|..+. . ..||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 34678999999999999999999998 789999999 888887763 346899999998652 1 3499
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
+|++... .+....+++++.+.|+ |||.+++.+....
T Consensus 136 ~v~~d~~-----~~~~~~~l~~~~~~L~---pgG~lv~~~~~~~ 171 (223)
T 3duw_A 136 FIFIDAD-----KQNNPAYFEWALKLSR---PGTVIIGDNVVRE 171 (223)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTCC---TTCEEEEESCSGG
T ss_pred EEEEcCC-----cHHHHHHHHHHHHhcC---CCcEEEEeCCCcC
Confidence 9987543 3455689999999999 7997777665543
No 150
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.26 E-value=1.3e-11 Score=106.99 Aligned_cols=106 Identities=16% Similarity=0.194 Sum_probs=85.2
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc------CCCCeEEeeCCCCC-CCC-cc
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG------TNDNLDFLGGNMFE-AIP-QA 173 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~~ 173 (279)
.+.+.+. ..+..+|||||||+|.++..++++ +..+++++|..++++.+++ ..++++++.+|+.+ +.+ .|
T Consensus 41 ~i~~~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~ 117 (348)
T 2y1w_A 41 AILQNHT--DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 117 (348)
T ss_dssp HHHHTGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred HHHhccc--cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCce
Confidence 3444443 446789999999999999998886 5669999999557666653 34789999999987 555 59
Q ss_pred ceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 174 NAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
|+|++..+++++..+.....+.++++.|+ |||.+++.
T Consensus 118 D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~li~~ 154 (348)
T 2y1w_A 118 DIIISEPMGYMLFNERMLESYLHAKKYLK---PSGNMFPT 154 (348)
T ss_dssp EEEEECCCBTTBTTTSHHHHHHHGGGGEE---EEEEEESC
T ss_pred eEEEEeCchhcCChHHHHHHHHHHHhhcC---CCeEEEEe
Confidence 99999988888887777888999999999 79988743
No 151
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.26 E-value=2.6e-11 Score=101.63 Aligned_cols=139 Identities=11% Similarity=0.069 Sum_probs=90.2
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEee-CCCCC----CCC--ccceeeehhhhcc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLG-GNMFE----AIP--QANAVLLKWILHN 184 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~-~d~~~----~~~--~~D~v~~~~vlh~ 184 (279)
...+|||||||||.++..+++. +..+++++|+ +.+++.+.....|+.... .|+.. ..+ .||++++..++|.
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s 163 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS 163 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC
T ss_pred cccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh
Confidence 4679999999999999998886 4568999999 888877443335654433 33321 123 3899998777774
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCch-hhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCcee
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKE-SMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHY 263 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~ 263 (279)
+ ..+|.+++++|+ |||+++++- -|.-..... ........|.. -..+..+++.++++++||++.
T Consensus 164 l-----~~vL~e~~rvLk---pGG~lv~lv--kPqfe~~~~~~~~~G~vrd~~------~~~~~~~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 164 L-----NLILPALAKILV---DGGQVVALV--KPQFEAGREQIGKNGIVRESS------IHEKVLETVTAFAVDYGFSVK 227 (291)
T ss_dssp G-----GGTHHHHHHHSC---TTCEEEEEE--CGGGTSCGGGCC-CCCCCCHH------HHHHHHHHHHHHHHHTTEEEE
T ss_pred H-----HHHHHHHHHHcC---cCCEEEEEE--CcccccChhhcCCCCccCCHH------HHHHHHHHHHHHHHHCCCEEE
Confidence 4 468999999999 799998862 111111100 00000000110 012267889999999999988
Q ss_pred EEEec
Q 023625 264 KITPM 268 (279)
Q Consensus 264 ~~~~~ 268 (279)
.+...
T Consensus 228 ~~~~s 232 (291)
T 3hp7_A 228 GLDFS 232 (291)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 77654
No 152
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.26 E-value=2.3e-11 Score=95.02 Aligned_cols=114 Identities=14% Similarity=0.181 Sum_probs=88.9
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCCC--ccceeeehhhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAIP--QANAVLLKWIL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~~--~~D~v~~~~vl 182 (279)
..+..+|||+|||+|.++..+++ +..+++++|. +.+++.+++. .++++++.+|+.++.+ .||+|++..+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGT- 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCc-
Confidence 45678999999999999999998 7889999999 8888887741 2589999999877443 5999999877
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCce
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSH 262 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~ 262 (279)
.+...+++++.++ + ||.+++...... +..++.+++++.||.+
T Consensus 110 -----~~~~~~l~~~~~~-~----gG~l~~~~~~~~----------------------------~~~~~~~~l~~~g~~~ 151 (183)
T 2yxd_A 110 -----KNIEKIIEILDKK-K----INHIVANTIVLE----------------------------NAAKIINEFESRGYNV 151 (183)
T ss_dssp -----SCHHHHHHHHHHT-T----CCEEEEEESCHH----------------------------HHHHHHHHHHHTTCEE
T ss_pred -----ccHHHHHHHHhhC-C----CCEEEEEecccc----------------------------cHHHHHHHHHHcCCeE
Confidence 2346788888888 4 898888663110 2456788999999876
Q ss_pred eEE
Q 023625 263 YKI 265 (279)
Q Consensus 263 ~~~ 265 (279)
..+
T Consensus 152 ~~~ 154 (183)
T 2yxd_A 152 DAV 154 (183)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 153
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.25 E-value=1.4e-11 Score=103.43 Aligned_cols=126 Identities=16% Similarity=0.216 Sum_probs=95.4
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHH-CCCCeEEEeeC-hhHHhhcccC------CCCeEEeeCCCCCCCC--
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATA-FPDIKCTVFDL-PHVVDNLQGT------NDNLDFLGGNMFEAIP-- 171 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~------~~ri~~~~~d~~~~~~-- 171 (279)
.++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++. .+++++..+|+.+..+
T Consensus 103 ~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 180 (277)
T 1o54_A 103 FIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEK 180 (277)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCC
T ss_pred HHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCC
Confidence 3444444 567789999999999999999999 67899999999 8888887741 2589999999987543
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHH
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDW 251 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~ 251 (279)
.||+|++. .++. ..+|+++.++|+ |||++++...... ...++
T Consensus 181 ~~D~V~~~-----~~~~--~~~l~~~~~~L~---pgG~l~~~~~~~~----------------------------~~~~~ 222 (277)
T 1o54_A 181 DVDALFLD-----VPDP--WNYIDKCWEALK---GGGRFATVCPTTN----------------------------QVQET 222 (277)
T ss_dssp SEEEEEEC-----CSCG--GGTHHHHHHHEE---EEEEEEEEESSHH----------------------------HHHHH
T ss_pred ccCEEEEC-----CcCH--HHHHHHHHHHcC---CCCEEEEEeCCHH----------------------------HHHHH
Confidence 59999982 3333 478999999999 7999988763210 13456
Q ss_pred HHHHHHCCCceeEEEe
Q 023625 252 KKLFLAAGFSHYKITP 267 (279)
Q Consensus 252 ~~ll~~aGf~~~~~~~ 267 (279)
.+.++++||..+++..
T Consensus 223 ~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 223 LKKLQELPFIRIEVWE 238 (277)
T ss_dssp HHHHHHSSEEEEEEEC
T ss_pred HHHHHHCCCceeEEEE
Confidence 6777888888776643
No 154
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.25 E-value=1.5e-11 Score=100.58 Aligned_cols=100 Identities=14% Similarity=0.270 Sum_probs=80.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCC-----Cccceeee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAI-----PQANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~-----~~~D~v~~ 178 (279)
..+..+|||||||+|..+..+++.+|..+++++|+ +.+++.|++ ..++++++.+|+.+.. ..||+|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 34678999999999999999999889999999999 888888874 2368999999997732 35999997
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
... .+....+++++.+.|+ |||.+++.+..+.
T Consensus 149 ~~~-----~~~~~~~l~~~~~~Lk---pgG~lv~d~~~~~ 180 (232)
T 3ntv_A 149 DAA-----KAQSKKFFEIYTPLLK---HQGLVITDNVLYH 180 (232)
T ss_dssp ETT-----SSSHHHHHHHHGGGEE---EEEEEEEECTTGG
T ss_pred cCc-----HHHHHHHHHHHHHhcC---CCeEEEEeeCCcC
Confidence 532 3345679999999999 7998877554443
No 155
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.24 E-value=1.3e-11 Score=96.27 Aligned_cols=110 Identities=11% Similarity=0.102 Sum_probs=85.1
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-CCCeEEeeCCCCC-CC---C--ccceeeehhhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-NDNLDFLGGNMFE-AI---P--QANAVLLKWIL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~ri~~~~~d~~~-~~---~--~~D~v~~~~vl 182 (279)
..++.+|||||||. +.+|. +.+++.|++. ..+++++.+|+.+ +. + .||+|++..++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 56789999999996 23888 8888888753 3469999999976 43 3 49999999999
Q ss_pred ccC-ChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 183 HNW-NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 183 h~~-~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
|++ ++. .++|++++++|+ |||++++.+........ ....++.++|.++++++||
T Consensus 74 ~~~~~~~--~~~l~~~~r~Lk---pgG~l~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 74 GSTTLHS--AEILAEIARILR---PGGCLFLKEPVETAVDN-------------------NSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TCCCCCC--HHHHHHHHHHEE---EEEEEEEEEEEESSSCS-------------------SSSSCCHHHHHHHHHHTTC
T ss_pred hhcccCH--HHHHHHHHHHCC---CCEEEEEEccccccccc-------------------ccccCCHHHHHHHHHHCCC
Confidence 998 554 689999999999 79999996654322110 1123578999999999999
No 156
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.24 E-value=1e-10 Score=98.28 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=73.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC--hhHHhhcccCC---------------CCeEEeeCCCCCC-----
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL--PHVVDNLQGTN---------------DNLDFLGGNMFEA----- 169 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~--~~~~~~a~~~~---------------~ri~~~~~d~~~~----- 169 (279)
.+..+|||||||+|.++..+++.. ..+++++|+ +.+++.++... +++++...|..+.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 456799999999999999888863 348999998 57776655311 3788886654431
Q ss_pred ----CCccceeeehhhhccCChhHHHHHHHHHHHhCC---CCCCCcEEEEE
Q 023625 170 ----IPQANAVLLKWILHNWNDEESVKLLKKCKEAIP---SKDEGGKVIII 213 (279)
Q Consensus 170 ----~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~---~~~pgG~lli~ 213 (279)
...||+|++..++|+.+ +...+++.+.++|+ |+ |||+++++
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~--~~~~ll~~l~~~Lk~~~p~-~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQ--AHDALLRSVKMLLALPAND-PTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGG--GHHHHHHHHHHHBCCTTTC-TTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccChH--HHHHHHHHHHHHhcccCCC-CCCEEEEE
Confidence 13599999999998644 45688999999998 53 48887764
No 157
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.23 E-value=2.6e-11 Score=99.05 Aligned_cols=134 Identities=13% Similarity=0.110 Sum_probs=83.1
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeE--------Eee-CCCCCCCC---ccceeeeh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLD--------FLG-GNMFEAIP---QANAVLLK 179 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~--------~~~-~d~~~~~~---~~D~v~~~ 179 (279)
...+|||||||+|.++..+++. ...+++++|+ +.+++.+++...++. +.. .|+..+.+ .+|++++.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 4569999999999999999987 3348999999 888887665334433 222 23322212 25665543
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCch-hhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHC
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKE-SMETQLCFDILMVSLFRGKERSVDDWKKLFLAA 258 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~a 258 (279)
. .++|++++++|+ |||+++++. .+....... ........+... ...+.+++.++++++
T Consensus 116 l----------~~~l~~i~rvLk---pgG~lv~~~--~p~~e~~~~~~~~~G~~~d~~~------~~~~~~~l~~~l~~a 174 (232)
T 3opn_A 116 L----------DLILPPLYEILE---KNGEVAALI--KPQFEAGREQVGKNGIIRDPKV------HQMTIEKVLKTATQL 174 (232)
T ss_dssp G----------GGTHHHHHHHSC---TTCEEEEEE--CHHHHSCHHHHC-CCCCCCHHH------HHHHHHHHHHHHHHH
T ss_pred H----------HHHHHHHHHhcc---CCCEEEEEE--CcccccCHHHhCcCCeecCcch------hHHHHHHHHHHHHHC
Confidence 2 468999999999 799998852 110000000 000000001110 112778999999999
Q ss_pred CCceeEEEec
Q 023625 259 GFSHYKITPM 268 (279)
Q Consensus 259 Gf~~~~~~~~ 268 (279)
||++..+...
T Consensus 175 Gf~v~~~~~~ 184 (232)
T 3opn_A 175 GFSVKGLTFS 184 (232)
T ss_dssp TEEEEEEEEC
T ss_pred CCEEEEEEEc
Confidence 9998888654
No 158
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.23 E-value=9.6e-11 Score=92.48 Aligned_cols=100 Identities=9% Similarity=0.052 Sum_probs=80.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-C--C--Cccceeeehh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-A--I--PQANAVLLKW 180 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~--~--~~~D~v~~~~ 180 (279)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++. .++++++.+|+.+ . . ..||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 45689999999999999988874 5568999999 8888888741 2689999999876 2 2 3599999987
Q ss_pred hhccCChhHHHHHHHHHHH--hCCCCCCCcEEEEEeee
Q 023625 181 ILHNWNDEESVKLLKKCKE--AIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~--~L~~~~pgG~lli~e~~ 216 (279)
.+|. ..++..++++++.+ +|+ |||.+++....
T Consensus 122 p~~~-~~~~~~~~l~~~~~~~~L~---pgG~l~~~~~~ 155 (189)
T 3p9n_A 122 PYNV-DSADVDAILAALGTNGWTR---EGTVAVVERAT 155 (189)
T ss_dssp CTTS-CHHHHHHHHHHHHHSSSCC---TTCEEEEEEET
T ss_pred CCCc-chhhHHHHHHHHHhcCccC---CCeEEEEEecC
Confidence 7653 34567889999999 999 79988886544
No 159
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.22 E-value=1.7e-11 Score=99.20 Aligned_cols=98 Identities=18% Similarity=0.226 Sum_probs=76.3
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCCC----CC--ccceeeehh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFEA----IP--QANAVLLKW 180 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~~----~~--~~D~v~~~~ 180 (279)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ ...+++++.+|..+. .+ .+|.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 567999999999999999999999999999999 888887763 135799999997651 33 599998864
Q ss_pred hhccCChh-HH------HHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 181 ILHNWNDE-ES------VKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 181 vlh~~~~~-~~------~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
... |+.. .. ..++++++++|+ |||.+++..
T Consensus 114 ~~p-~~~~~~~~rr~~~~~~l~~~~r~Lk---pGG~l~i~t 150 (218)
T 3dxy_A 114 PDP-WHKARHNKRRIVQVPFAELVKSKLQ---LGGVFHMAT 150 (218)
T ss_dssp CCC-CCSGGGGGGSSCSHHHHHHHHHHEE---EEEEEEEEE
T ss_pred CCC-ccchhhhhhhhhhHHHHHHHHHHcC---CCcEEEEEe
Confidence 332 2221 11 258999999999 799988765
No 160
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.22 E-value=4.2e-11 Score=103.83 Aligned_cols=97 Identities=18% Similarity=0.265 Sum_probs=77.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc------CCCCeEEeeCCCCC-CCC--ccceeeehhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG------TNDNLDFLGGNMFE-AIP--QANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~~~ri~~~~~d~~~-~~~--~~D~v~~~~v 181 (279)
..+..+|||||||+|.++..++++ +..+++++|+.++++.|++ ..++++++.+|+.+ +.+ .||+|++..+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 345789999999999999999987 6679999999667777663 34679999999988 555 5999998765
Q ss_pred hccC-ChhHHHHHHHHHHHhCCCCCCCcEEE
Q 023625 182 LHNW-NDEESVKLLKKCKEAIPSKDEGGKVI 211 (279)
Q Consensus 182 lh~~-~~~~~~~~L~~~~~~L~~~~pgG~ll 211 (279)
.+.+ ..+....+|+.+.++|+ |||.++
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~Lk---pgG~li 170 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLA---PDGLIF 170 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEE---EEEEEE
T ss_pred cccccCchhHHHHHHHHHHhCC---CCCEEc
Confidence 4443 23445688999999999 799876
No 161
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.22 E-value=1.9e-11 Score=100.92 Aligned_cols=100 Identities=16% Similarity=0.205 Sum_probs=80.5
Q ss_pred CCCEEEEecCCccHHHHHHHHH--CCCCeEEEeeC-hhHHhhcccC--CC-------C----------------------
Q 023625 113 GLKSLVDVAGGTGIMARAIATA--FPDIKCTVFDL-PHVVDNLQGT--ND-------N---------------------- 158 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~--~p~~~~~~~D~-~~~~~~a~~~--~~-------r---------------------- 158 (279)
+..+|||+|||+|.++..+++. .+..+++++|+ +.+++.|+.. .. +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4679999999999999999998 78889999999 8888888731 11 2
Q ss_pred ---eE-------------EeeCCCCCCC------C--ccceeeehhhhccCCh-------hHHHHHHHHHHHhCCCCCCC
Q 023625 159 ---LD-------------FLGGNMFEAI------P--QANAVLLKWILHNWND-------EESVKLLKKCKEAIPSKDEG 207 (279)
Q Consensus 159 ---i~-------------~~~~d~~~~~------~--~~D~v~~~~vlh~~~~-------~~~~~~L~~~~~~L~~~~pg 207 (279)
++ +..+|++++. + .||+|++...++...+ +....+++++.++|+ ||
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pg 207 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALP---AH 207 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSC---TT
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcC---CC
Confidence 67 9999998843 3 5999999766554432 566799999999999 79
Q ss_pred cEEEEEee
Q 023625 208 GKVIIIDM 215 (279)
Q Consensus 208 G~lli~e~ 215 (279)
|.++++..
T Consensus 208 G~l~~~~~ 215 (250)
T 1o9g_A 208 AVIAVTDR 215 (250)
T ss_dssp CEEEEEES
T ss_pred cEEEEeCc
Confidence 99998544
No 162
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.21 E-value=7.5e-11 Score=99.25 Aligned_cols=95 Identities=18% Similarity=0.299 Sum_probs=75.7
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCCC-cc---ceeeeh--
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAIP-QA---NAVLLK-- 179 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~~-~~---D~v~~~-- 179 (279)
+..+|||+|||+|.++..+++. |..+++++|+ +.+++.|++ ..++++|+.+|++++.+ .| |+|++.
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCC
Confidence 5679999999999999999999 9999999999 889888774 23579999999998544 58 999985
Q ss_pred ----------hhhccCCh------hHHHHHHHHHH-HhCCCCCCCcEEEE
Q 023625 180 ----------WILHNWND------EESVKLLKKCK-EAIPSKDEGGKVII 212 (279)
Q Consensus 180 ----------~vlh~~~~------~~~~~~L~~~~-~~L~~~~pgG~lli 212 (279)
.+.| .+. ++...+++++. +.++ |||.+++
T Consensus 202 yi~~~~~l~~~v~~-ep~~al~~~~dgl~~~~~i~~~~l~---pgG~l~~ 247 (284)
T 1nv8_A 202 YVKSSAHLPKDVLF-EPPEALFGGEDGLDFYREFFGRYDT---SGKIVLM 247 (284)
T ss_dssp CBCGGGSCTTSCCC-SCHHHHBCTTTSCHHHHHHHHHCCC---TTCEEEE
T ss_pred CCCcccccChhhcc-CcHHHhcCCCcHHHHHHHHHHhcCC---CCCEEEE
Confidence 2221 111 12237899999 9999 7998876
No 163
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.21 E-value=4.1e-11 Score=97.65 Aligned_cols=134 Identities=11% Similarity=0.027 Sum_probs=99.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCCCC-C-ccceeeehhhhcc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFEAI-P-QANAVLLKWILHN 184 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~~~-~-~~D~v~~~~vlh~ 184 (279)
.+..+|||||||.|-++..+....|..+++++|+ +.+++.++. ...+.++...|+..+. + .||++++.-++|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 4578999999999999999999999999999999 888888774 3456899999998843 3 5999999999999
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEee--ecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCce
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDM--AIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSH 262 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~ 262 (279)
+.+++....+ ++.++|+ |+|.++-.+. +..... . |. ..-.+.|++.+.+.|..+
T Consensus 211 Le~q~kg~g~-~ll~aL~---~~~vvVSfp~ksl~Grs~-g-------------m~------~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVN---SPNIVVTFPTKSLGQRSK-G-------------MF------QNYSQSFESQARERSCRI 266 (281)
T ss_dssp HHHHSTTHHH-HHHHHSS---CSEEEEEEECC--------C-------------HH------HHHHHHHHHHHHHHTCCE
T ss_pred hhhhhhHHHH-HHHHHhC---CCCEEEeccchhhcCCCc-c-------------hh------hHHHHHHHHHHHhcCCce
Confidence 9888766777 8999999 5765555443 111111 0 00 113568899999999844
Q ss_pred eEEEecCC
Q 023625 263 YKITPMLG 270 (279)
Q Consensus 263 ~~~~~~~~ 270 (279)
. ...+++
T Consensus 267 ~-~~~~~n 273 (281)
T 3lcv_B 267 Q-RLEIGN 273 (281)
T ss_dssp E-EEEETT
T ss_pred e-eeeecC
Confidence 3 334443
No 164
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.21 E-value=2.8e-11 Score=100.59 Aligned_cols=100 Identities=12% Similarity=0.267 Sum_probs=77.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCCC--------CC-
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFEA--------IP- 171 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~~--------~~- 171 (279)
..+..+|||+|||+|.++..+++++|..+++++|+ +.+++.|++. .++++++.+|+.+. .+
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 34567999999999999999999999999999999 8888877642 23699999999874 22
Q ss_pred -ccceeeehhhhc----------------cCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 172 -QANAVLLKWILH----------------NWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 172 -~~D~v~~~~vlh----------------~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.||+|++.-..+ +........+++.+.+.|+ |||+++++
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~ 169 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMV---SGGQLSLI 169 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEE---EEEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcC---CCCEEEEE
Confidence 599999962222 1222335688999999999 79998875
No 165
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.21 E-value=6.7e-11 Score=97.28 Aligned_cols=100 Identities=13% Similarity=0.186 Sum_probs=80.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC--C-C------Cccc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE--A-I------PQAN 174 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~--~-~------~~~D 174 (279)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ ..++++++.+|..+ + . ..||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 4568999999999999999999986 789999999 888877764 34699999999865 2 2 4599
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCC
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIEN 219 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~ 219 (279)
+|++... ......+|+++.+.|+ |||.+++.+..+..
T Consensus 139 ~V~~d~~-----~~~~~~~l~~~~~~Lk---pGG~lv~d~~~~~g 175 (242)
T 3r3h_A 139 FIFIDAD-----KTNYLNYYELALKLVT---PKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEESC-----GGGHHHHHHHHHHHEE---EEEEEEEECSSSSS
T ss_pred EEEEcCC-----hHHhHHHHHHHHHhcC---CCeEEEEECCccCC
Confidence 9988543 3456778999999999 79988887766544
No 166
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.21 E-value=4.9e-11 Score=97.39 Aligned_cols=99 Identities=10% Similarity=0.253 Sum_probs=81.2
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC---C---Cccceee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA---I---PQANAVL 177 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~---~---~~~D~v~ 177 (279)
..+..+|||||||+|..+..+++.+|..+++++|+ +..++.|++ ..++++++.+|+.+. . ..||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 34678999999999999999999999999999999 888888774 235899999998762 1 3599999
Q ss_pred ehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 178 LKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 178 ~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
+....+ +...+|+++.++|+ |||.+++.+...
T Consensus 132 ~~~~~~-----~~~~~l~~~~~~L~---pgG~lv~~~~~~ 163 (233)
T 2gpy_A 132 IDAAKG-----QYRRFFDMYSPMVR---PGGLILSDNVLF 163 (233)
T ss_dssp EEGGGS-----CHHHHHHHHGGGEE---EEEEEEEETTTC
T ss_pred ECCCHH-----HHHHHHHHHHHHcC---CCeEEEEEcCCc
Confidence 877654 45688999999999 799988865443
No 167
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.21 E-value=5.4e-11 Score=95.46 Aligned_cols=99 Identities=9% Similarity=0.091 Sum_probs=79.7
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCCCC---Cc
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFEAI---PQ 172 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~~~---~~ 172 (279)
.+++.+. ..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ...++++..+|..+.. ..
T Consensus 68 ~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 143 (210)
T 3lbf_A 68 RMTELLE--LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAP 143 (210)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred HHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCC
Confidence 3444443 567889999999999999999998 578999999 888888774 1257999999998732 25
Q ss_pred cceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 173 ANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
||+|++..++|++++ ++.+.|+ |||++++.-.
T Consensus 144 ~D~i~~~~~~~~~~~--------~~~~~L~---pgG~lv~~~~ 175 (210)
T 3lbf_A 144 FDAIIVTAAPPEIPT--------ALMTQLD---EGGILVLPVG 175 (210)
T ss_dssp EEEEEESSBCSSCCT--------HHHHTEE---EEEEEEEEEC
T ss_pred ccEEEEccchhhhhH--------HHHHhcc---cCcEEEEEEc
Confidence 999999999998876 4678899 7999888654
No 168
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.20 E-value=5.4e-11 Score=95.81 Aligned_cols=100 Identities=13% Similarity=0.156 Sum_probs=80.3
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCCC---
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAIP--- 171 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~~--- 171 (279)
.+++.+. ..+..+|||||||+|.++..+++.. |..+++++|. +.+++.+++. .+++++..+|+..+.+
T Consensus 68 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 68 MMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred HHHHhhC--CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence 3444443 4567899999999999999999987 6689999999 8888887741 2579999999866433
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.||+|++..++|++++ ++.+.|+ |||++++..
T Consensus 146 ~fD~v~~~~~~~~~~~--------~~~~~L~---pgG~lv~~~ 177 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIPE--------PLIRQLK---DGGKLLMPV 177 (215)
T ss_dssp CEEEEEESSBBSSCCH--------HHHHTEE---EEEEEEEEE
T ss_pred CeeEEEECCchHHHHH--------HHHHHcC---CCcEEEEEE
Confidence 5999999999998763 6788899 799988865
No 169
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.20 E-value=5.2e-11 Score=99.32 Aligned_cols=94 Identities=16% Similarity=0.248 Sum_probs=79.1
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCC--ccceeeehhhhccCCh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIP--QANAVLLKWILHNWND 187 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~~~~ 187 (279)
.+..+|||||||+|.++..+++..|+.+++++|+ +.+++.+++...++.+..+|+.+ +.+ .||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 4578999999999999999999988889999999 88898888755789999999876 443 59999986542
Q ss_pred hHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 188 EESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 188 ~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
..++++.++|+ |||++++.....
T Consensus 159 ----~~l~~~~~~L~---pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ----CKAEELARVVK---PGGWVITATPGP 181 (269)
T ss_dssp ----CCHHHHHHHEE---EEEEEEEEEECT
T ss_pred ----hhHHHHHHhcC---CCcEEEEEEcCH
Confidence 24889999999 799999987543
No 170
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.20 E-value=3e-11 Score=97.88 Aligned_cols=99 Identities=15% Similarity=0.255 Sum_probs=77.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC---CC------Cccc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE---AI------PQAN 174 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~---~~------~~~D 174 (279)
.+..+|||||||+|..+..+++..+ +.+++++|+ +.+++.|++ ..++++++.+|..+ .. ..||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 4678999999999999999999875 789999999 888888874 34589999999743 12 3599
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
+|++....+.+.+ ..++++.+ +.|+ |||.+++.+..
T Consensus 137 ~V~~d~~~~~~~~--~~~~~~~~-~~Lk---pgG~lv~~~~~ 172 (221)
T 3u81_A 137 MVFLDHWKDRYLP--DTLLLEKC-GLLR---KGTVLLADNVI 172 (221)
T ss_dssp EEEECSCGGGHHH--HHHHHHHT-TCCC---TTCEEEESCCC
T ss_pred EEEEcCCcccchH--HHHHHHhc-cccC---CCeEEEEeCCC
Confidence 9999877765533 34677777 9999 79988775543
No 171
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.20 E-value=6.5e-11 Score=103.58 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=81.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-CCC--ccceeeehhhhcc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-AIP--QANAVLLKWILHN 184 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh~ 184 (279)
+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ....++++.+|+.+ +.+ .||+|++...+|.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 5679999999999999999997 569999999 888888774 23358999999988 333 5999999988886
Q ss_pred ---CChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 185 ---WNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 185 ---~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
...+...++++++.+.|+ |||.++++.
T Consensus 311 ~~~~~~~~~~~~l~~~~~~Lk---pGG~l~iv~ 340 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLR---PGGVFFLVS 340 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEE---EEEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcC---cCcEEEEEE
Confidence 345667899999999999 799998864
No 172
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.19 E-value=5.8e-11 Score=97.17 Aligned_cols=99 Identities=20% Similarity=0.258 Sum_probs=74.1
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----------CCCCeEEeeCCCCC--C--CC--cc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----------TNDNLDFLGGNMFE--A--IP--QA 173 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~ri~~~~~d~~~--~--~~--~~ 173 (279)
.+..+|||||||+|.++..+++.+|+..++++|+ +.+++.|++ ...+++++.+|+.+ + ++ .+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4567899999999999999999999999999999 888876541 23689999999876 2 33 48
Q ss_pred ceeeehhhhccCChh---H----HHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 174 NAVLLKWILHNWNDE---E----SVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 174 D~v~~~~vlh~~~~~---~----~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
|.|++...-. |... . ...+|++++++|+ |||.+++..
T Consensus 125 D~v~~~~~dp-~~k~~h~krr~~~~~~l~~~~~~Lk---pGG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPDP-HFKRTKHKWRIISPTLLAEYAYVLR---VGGLVYTIT 168 (235)
T ss_dssp EEEEEESCC------------CCCHHHHHHHHHHEE---EEEEEEEEE
T ss_pred eEEEEeCCCc-hhhhhhhhhhhhhHHHHHHHHHHCC---CCCEEEEEe
Confidence 9988643211 1110 0 1368999999999 799988764
No 173
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.19 E-value=2.8e-11 Score=98.17 Aligned_cols=99 Identities=15% Similarity=0.177 Sum_probs=80.4
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC---C------Cccc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA---I------PQAN 174 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~---~------~~~D 174 (279)
.+..+|||||||+|..+..+++.+| ..+++++|+ +.+++.+++ ..++++++.+|..+. . ..||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 4567999999999999999999988 789999999 888888764 346799999998652 1 4599
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
+|++.. +......+++++.+.|+ |||.+++.+..+.
T Consensus 143 ~v~~~~-----~~~~~~~~l~~~~~~L~---pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 143 LIYIDA-----DKANTDLYYEESLKLLR---EGGLIAVDNVLRR 178 (225)
T ss_dssp EEEECS-----CGGGHHHHHHHHHHHEE---EEEEEEEECSSGG
T ss_pred EEEECC-----CHHHHHHHHHHHHHhcC---CCcEEEEeCCCcC
Confidence 999644 34456789999999999 7999888776554
No 174
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.17 E-value=5.9e-11 Score=96.66 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=79.3
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCCCC---Cccc
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFEAI---PQAN 174 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~~~---~~~D 174 (279)
.+++.+. ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++. ..+++++.+|+.+.. ..||
T Consensus 61 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD 136 (231)
T 1vbf_A 61 FMLDELD--LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYD 136 (231)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEE
T ss_pred HHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCcc
Confidence 3444443 4567899999999999999999986 78999999 8888888742 128999999997733 2599
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+|++..++|++.+ ++.++|+ |||++++...
T Consensus 137 ~v~~~~~~~~~~~--------~~~~~L~---pgG~l~~~~~ 166 (231)
T 1vbf_A 137 RVVVWATAPTLLC--------KPYEQLK---EGGIMILPIG 166 (231)
T ss_dssp EEEESSBBSSCCH--------HHHHTEE---EEEEEEEEEC
T ss_pred EEEECCcHHHHHH--------HHHHHcC---CCcEEEEEEc
Confidence 9999999998764 4778899 7999988754
No 175
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.17 E-value=1e-10 Score=90.65 Aligned_cols=97 Identities=16% Similarity=0.259 Sum_probs=77.8
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeChhHHhhcccCCCCeEEeeCCCCC-C--------CC--ccceeee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDLPHVVDNLQGTNDNLDFLGGNMFE-A--------IP--QANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~-~--------~~--~~D~v~~ 178 (279)
..+..+|||+|||+|.++..+++.+ |+.+++++|+.++++. .++++..+|+.+ + .+ .||+|++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEEE
Confidence 3567799999999999999999995 7789999999444321 689999999987 4 44 5999999
Q ss_pred hhhhccCChhH---------HHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 179 KWILHNWNDEE---------SVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 179 ~~vlh~~~~~~---------~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
..++|...... ...+++++.++|+ |||.+++...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~---~gG~l~~~~~ 137 (180)
T 1ej0_A 95 DMAPNMSGTPAVDIPRAMYLVELALEMCRDVLA---PGGSFVVKVF 137 (180)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEEEE
T ss_pred CCCccccCCCccchHHHHHHHHHHHHHHHHHcC---CCcEEEEEEe
Confidence 88887655431 1588999999999 7999887664
No 176
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.17 E-value=1.8e-10 Score=99.50 Aligned_cols=97 Identities=21% Similarity=0.299 Sum_probs=76.2
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc------CCCCeEEeeCCCCC-CCC--ccceeeehhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG------TNDNLDFLGGNMFE-AIP--QANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~~~ri~~~~~d~~~-~~~--~~D~v~~~~v 181 (279)
..+..+|||||||+|.++..++++ +..+++++|..++++.|++ ..++++++.+|+.+ +.+ .||+|++..+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 456789999999999999999987 4568999999558777764 23789999999987 555 5999998663
Q ss_pred hccC-ChhHHHHHHHHHHHhCCCCCCCcEEE
Q 023625 182 LHNW-NDEESVKLLKKCKEAIPSKDEGGKVI 211 (279)
Q Consensus 182 lh~~-~~~~~~~~L~~~~~~L~~~~pgG~ll 211 (279)
.+.+ .......+|+++.++|+ |||.++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~Lk---pgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLA---KGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEE---EEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcC---CCcEEE
Confidence 2222 23345678999999999 799887
No 177
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.17 E-value=2.1e-10 Score=91.31 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=73.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCC--CCeEEEeeChhHHhhcccCCCCeEEeeCCCCC-C------------------
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFP--DIKCTVFDLPHVVDNLQGTNDNLDFLGGNMFE-A------------------ 169 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p--~~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~-~------------------ 169 (279)
+.+..+|||+|||+|.++..+++++| ..+++++|+.++. . .++++++.+|+.+ +
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----~-~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----P-IPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----C-CTTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----C-CCCceEEEccccchhhhhhccccccccccchhh
Confidence 35678999999999999999999998 6899999995431 1 2579999999977 3
Q ss_pred -------CC--ccceeeehhhhccCC----hhH-----HHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 170 -------IP--QANAVLLKWILHNWN----DEE-----SVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 170 -------~~--~~D~v~~~~vlh~~~----~~~-----~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.+ .||+|++...+|... +.. ..++|+++.++|+ |||.+++.
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lk---pgG~lv~~ 153 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYIN---IGGTYIVK 153 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHcc---CCCEEEEE
Confidence 23 599999977776431 111 1348999999999 79988773
No 178
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.15 E-value=6e-11 Score=97.76 Aligned_cols=94 Identities=21% Similarity=0.334 Sum_probs=73.2
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-------------CCCCeEEeeCCCCCC----CC--
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-------------TNDNLDFLGGNMFEA----IP-- 171 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------~~~ri~~~~~d~~~~----~~-- 171 (279)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ...+++++.+|+.+. .+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4568999999999999999999999999999999 888876642 125899999998762 22
Q ss_pred ccceeeehhhhccCChhHH-----------HHHHHHHHHhCCCCCCCcEEEEE
Q 023625 172 QANAVLLKWILHNWNDEES-----------VKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~-----------~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.+|.|++. +++... ..+++++.++|+ |||.+++.
T Consensus 128 ~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~Lk---pgG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLK---EGGVVYTI 172 (246)
T ss_dssp CEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEE---EEEEEEEE
T ss_pred ccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcC---CCCEEEEE
Confidence 36777642 233321 378999999999 79998885
No 179
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.15 E-value=5.2e-11 Score=102.73 Aligned_cols=101 Identities=18% Similarity=0.228 Sum_probs=77.9
Q ss_pred HHHhchhhhCCCCEEEEecCCccHHHHHHHHH-CCCCeEEEeeC-hhHHhhcccC----------------CCCeEEeeC
Q 023625 103 VIKDCKEVFEGLKSLVDVAGGTGIMARAIATA-FPDIKCTVFDL-PHVVDNLQGT----------------NDNLDFLGG 164 (279)
Q Consensus 103 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~----------------~~ri~~~~~ 164 (279)
++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.|++. .+++++..+
T Consensus 97 ~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 97 ILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 444443 567789999999999999999998 57789999999 8888877641 268999999
Q ss_pred CCCCC---CC--ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 165 NMFEA---IP--QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 165 d~~~~---~~--~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
|+.+. .+ .||+|++.. ++. ..+++++.++|+ |||++++...
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~-----~~~--~~~l~~~~~~Lk---pgG~lv~~~~ 220 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDM-----LNP--HVTLPVFYPHLK---HGGVCAVYVV 220 (336)
T ss_dssp CTTCCC-------EEEEEECS-----SST--TTTHHHHGGGEE---EEEEEEEEES
T ss_pred ChHHcccccCCCCeeEEEECC-----CCH--HHHHHHHHHhcC---CCcEEEEEeC
Confidence 99873 23 499999842 222 137899999999 7999987764
No 180
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.15 E-value=2.3e-11 Score=94.15 Aligned_cols=97 Identities=10% Similarity=0.055 Sum_probs=72.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----CCCeEEeeCCCCCCC-------Cccceeeehh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----NDNLDFLGGNMFEAI-------PQANAVLLKW 180 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~ri~~~~~d~~~~~-------~~~D~v~~~~ 180 (279)
+..+|||+|||+|.++..+++..+. ++++|+ +.+++.++.. ..+++++.+|+.+.. ..||+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 6789999999999999999998765 999999 8888888741 128999999987621 1599999987
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
++| -..++..+.+.+ .++|+ |||.+++....
T Consensus 119 ~~~-~~~~~~~~~~~~-~~~L~---~gG~~~~~~~~ 149 (171)
T 1ws6_A 119 PYA-MDLAALFGELLA-SGLVE---AGGLYVLQHPK 149 (171)
T ss_dssp CTT-SCTTHHHHHHHH-HTCEE---EEEEEEEEEET
T ss_pred CCc-hhHHHHHHHHHh-hcccC---CCcEEEEEeCC
Confidence 776 223333333333 48999 79988775543
No 181
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.15 E-value=2e-10 Score=98.74 Aligned_cols=97 Identities=19% Similarity=0.316 Sum_probs=76.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc------CCCCeEEeeCCCCC-CCC--ccceeeehhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG------TNDNLDFLGGNMFE-AIP--QANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~~~ri~~~~~d~~~-~~~--~~D~v~~~~v 181 (279)
..+..+|||||||+|.++..++++ +..+++++|..++++.|++ ..++++++.+|+.+ +.+ .+|+|++..+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCc
Confidence 345679999999999999998886 4568999999667776663 34689999999987 555 5999998765
Q ss_pred hccC-ChhHHHHHHHHHHHhCCCCCCCcEEE
Q 023625 182 LHNW-NDEESVKLLKKCKEAIPSKDEGGKVI 211 (279)
Q Consensus 182 lh~~-~~~~~~~~L~~~~~~L~~~~pgG~ll 211 (279)
.+.+ ..+....+|+++.+.|+ |||.++
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~Lk---pgG~li 142 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLV---EGGLIF 142 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEE---EEEEEE
T ss_pred hhhcccHHHHHHHHHHHHhhcC---CCeEEE
Confidence 4443 23345678999999999 799886
No 182
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.14 E-value=7.5e-11 Score=99.96 Aligned_cols=98 Identities=14% Similarity=0.269 Sum_probs=77.8
Q ss_pred CEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC---CC--Cccceeeehhhhc
Q 023625 115 KSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE---AI--PQANAVLLKWILH 183 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~---~~--~~~D~v~~~~vlh 183 (279)
.+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+|++++.+|..+ .. ..||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 4999999999999999999999999999999 999998875 14689999999865 23 2599999865444
Q ss_pred cCChhH--HHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 184 NWNDEE--SVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 184 ~~~~~~--~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
...... ...++++++++|+ |||.+++...
T Consensus 171 ~~~~~~L~t~efl~~~~r~Lk---pgGvlv~~~~ 201 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLA---PGGLYVANCG 201 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEE---EEEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcC---CCcEEEEEec
Confidence 322222 1578999999999 7998776543
No 183
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.14 E-value=9.2e-11 Score=102.67 Aligned_cols=101 Identities=15% Similarity=0.206 Sum_probs=80.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc------CCCCeEEeeCCCCC-CCC-ccceeeehhhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG------TNDNLDFLGGNMFE-AIP-QANAVLLKWIL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~~D~v~~~~vl 182 (279)
..+..+|||||||+|.++..++++. ..+++++|...+++.+++ ..++++++.+|+.+ +.+ .||+|++..+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 4567899999999999999999973 348999999877777663 34779999999987 554 69999997666
Q ss_pred ccCCh-hHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 183 HNWND-EESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 183 h~~~~-~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
|.... +....+++++.+.|+ |||.+++.+.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~Lk---pgG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLK---PTGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEE---EEEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCC---CCeEEEEecC
Confidence 65543 345678999999999 7998876554
No 184
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.14 E-value=8.9e-11 Score=99.15 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=74.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----------CCCCeEEeeCCCCCCC----Ccccee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----------TNDNLDFLGGNMFEAI----PQANAV 176 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~ri~~~~~d~~~~~----~~~D~v 176 (279)
++..+|||||||+|..+..+++..|..+++++|+ +.+++.|++ ..+|++++.+|..+.. ..||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4568999999999999999999878889999999 899988874 1359999999987632 259999
Q ss_pred eehhhhccCChhHH--HHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 177 LLKWILHNWNDEES--VKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 177 ~~~~vlh~~~~~~~--~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
++...-+.-+.... ..++++++++|+ |||.+++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~Lk---pgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLN---PGGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEE---EEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcC---CCCEEEEec
Confidence 99544332222222 578999999999 799887754
No 185
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.13 E-value=9.5e-11 Score=95.30 Aligned_cols=100 Identities=16% Similarity=0.234 Sum_probs=80.2
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC---C------Ccc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA---I------PQA 173 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~---~------~~~ 173 (279)
..+..+|||||||+|..+..+++..| ..+++++|+ +.+++.+++ ..++++++.+|..+. . ..|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 45678999999999999999999987 789999999 888888774 236899999998641 1 459
Q ss_pred ceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 174 NAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
|+|++... ......+++++.+.|+ |||.+++.+..+.
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~---pgG~lv~~~~~~~ 183 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLR---PGGILAVLRVLWR 183 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEE---EEEEEEEECCSGG
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcC---CCeEEEEECCCcC
Confidence 99998432 3445688999999999 7998888765543
No 186
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.13 E-value=2.5e-10 Score=95.69 Aligned_cols=102 Identities=11% Similarity=0.251 Sum_probs=80.2
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHH-CCCCeEEEeeC-hhHHhhcccC--------CCCeEEeeCCCCC-CC
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATA-FPDIKCTVFDL-PHVVDNLQGT--------NDNLDFLGGNMFE-AI 170 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~--------~~ri~~~~~d~~~-~~ 170 (279)
.++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++. .++++++.+|+.+ +.
T Consensus 90 ~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 90 QIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred HHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 3444444 567789999999999999999996 57889999999 8888877641 3689999999987 44
Q ss_pred C--ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 171 P--QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 171 ~--~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+ .||+|++. .++. ..+|+++.++|+ |||++++...
T Consensus 168 ~~~~~D~v~~~-----~~~~--~~~l~~~~~~L~---pgG~l~~~~~ 204 (280)
T 1i9g_A 168 PDGSVDRAVLD-----MLAP--WEVLDAVSRLLV---AGGVLMVYVA 204 (280)
T ss_dssp CTTCEEEEEEE-----SSCG--GGGHHHHHHHEE---EEEEEEEEES
T ss_pred CCCceeEEEEC-----CcCH--HHHHHHHHHhCC---CCCEEEEEeC
Confidence 3 59999982 2332 267999999999 7999998764
No 187
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.11 E-value=2e-10 Score=98.20 Aligned_cols=101 Identities=13% Similarity=0.230 Sum_probs=80.6
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCC---C
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAI---P 171 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~---~ 171 (279)
.+++.+. ..+..+|||||||+|.++..+++..+ ..+++++|+ +.+++.+++. ..+++++.+|+.+.. .
T Consensus 66 ~l~~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~ 143 (317)
T 1dl5_A 66 LFMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFS 143 (317)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCC
Confidence 3444443 56778999999999999999999987 478999999 8888887741 246999999997732 3
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.||+|++..++|+++ +++.+.|+ |||++++...
T Consensus 144 ~fD~Iv~~~~~~~~~--------~~~~~~Lk---pgG~lvi~~~ 176 (317)
T 1dl5_A 144 PYDVIFVTVGVDEVP--------ETWFTQLK---EGGRVIVPIN 176 (317)
T ss_dssp CEEEEEECSBBSCCC--------HHHHHHEE---EEEEEEEEBC
T ss_pred CeEEEEEcCCHHHHH--------HHHHHhcC---CCcEEEEEEC
Confidence 599999999999876 35677899 7999988753
No 188
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.10 E-value=6.9e-11 Score=94.92 Aligned_cols=98 Identities=12% Similarity=0.163 Sum_probs=78.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC--CC-Cccceeeehh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE--AI-PQANAVLLKW 180 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~--~~-~~~D~v~~~~ 180 (279)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ ..++++++.+|..+ +. ++||+|++..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 134 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC 134 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC
Confidence 3567999999999999999999988 789999999 888888774 23579999999865 22 1299998863
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
. ..+...+++++.+.|+ |||.+++.+..+
T Consensus 135 ~-----~~~~~~~l~~~~~~Lk---pgG~lv~~~~~~ 163 (210)
T 3c3p_A 135 D-----VFNGADVLERMNRCLA---KNALLIAVNALR 163 (210)
T ss_dssp T-----TSCHHHHHHHHGGGEE---EEEEEEEESSSS
T ss_pred C-----hhhhHHHHHHHHHhcC---CCeEEEEECccc
Confidence 2 2345688999999999 799888766544
No 189
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.10 E-value=2.3e-10 Score=94.39 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=79.4
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC--C--------CCc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE--A--------IPQ 172 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~--~--------~~~ 172 (279)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ ..++++++.+|..+ + ...
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 34568999999999999999999988 789999999 888888774 23689999999865 2 135
Q ss_pred cceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 173 ANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
||+|++... ......+++++.+.|+ |||.+++.+..+
T Consensus 157 fD~V~~d~~-----~~~~~~~l~~~~~~Lk---pGG~lv~d~~~~ 193 (247)
T 1sui_A 157 YDFIFVDAD-----KDNYLNYHKRLIDLVK---VGGVIGYDNTLW 193 (247)
T ss_dssp BSEEEECSC-----STTHHHHHHHHHHHBC---TTCCEEEECTTG
T ss_pred EEEEEEcCc-----hHHHHHHHHHHHHhCC---CCeEEEEecCCc
Confidence 999998543 2345788999999999 799888766444
No 190
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.10 E-value=1.6e-10 Score=90.69 Aligned_cols=97 Identities=12% Similarity=0.023 Sum_probs=74.1
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC-------CCccceee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA-------IPQANAVL 177 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~-------~~~~D~v~ 177 (279)
.+..+|||+|||+|.++..+++ .+..+++++|+ +.+++.++. ..++++++.+|+.+. ...||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 3567999999999999999888 45679999999 888888774 235799999998762 23599999
Q ss_pred ehhhhccCChhHHHHHHHHH--HHhCCCCCCCcEEEEEee
Q 023625 178 LKWILHNWNDEESVKLLKKC--KEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 178 ~~~vlh~~~~~~~~~~L~~~--~~~L~~~~pgG~lli~e~ 215 (279)
+...+|....+ ..++.+ .++|+ |||.+++...
T Consensus 122 ~~~~~~~~~~~---~~~~~l~~~~~L~---~gG~l~~~~~ 155 (187)
T 2fhp_A 122 LDPPYAKQEIV---SQLEKMLERQLLT---NEAVIVCETD 155 (187)
T ss_dssp ECCCGGGCCHH---HHHHHHHHTTCEE---EEEEEEEEEE
T ss_pred ECCCCCchhHH---HHHHHHHHhcccC---CCCEEEEEeC
Confidence 98776533333 445555 78899 7998877554
No 191
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.10 E-value=5e-11 Score=92.98 Aligned_cols=98 Identities=13% Similarity=0.086 Sum_probs=74.8
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC---C-Cccceeeehh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA---I-PQANAVLLKW 180 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~---~-~~~D~v~~~~ 180 (279)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ ..++++++.+|+.+. . ..||+|++..
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 35679999999999999999987 6679999999 888888774 125799999998762 2 3599999976
Q ss_pred hhccCChhHHHHHHHHHH--HhCCCCCCCcEEEEEeee
Q 023625 181 ILHNWNDEESVKLLKKCK--EAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~--~~L~~~~pgG~lli~e~~ 216 (279)
.+|. .....+++.+. ++|+ |||.+++....
T Consensus 109 ~~~~---~~~~~~~~~l~~~~~L~---~gG~l~~~~~~ 140 (177)
T 2esr_A 109 PYAK---ETIVATIEALAAKNLLS---EQVMVVCETDK 140 (177)
T ss_dssp SSHH---HHHHHHHHHHHHTTCEE---EEEEEEEEEET
T ss_pred CCCc---chHHHHHHHHHhCCCcC---CCcEEEEEECC
Confidence 6542 23345566665 8899 79988876543
No 192
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.10 E-value=4.7e-10 Score=95.82 Aligned_cols=102 Identities=17% Similarity=0.216 Sum_probs=78.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-C-CC-ccceeeeh-
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-A-IP-QANAVLLK- 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~-~~-~~D~v~~~- 179 (279)
..+..+|||+|||+|..+..+++..+ ..+++++|+ +..++.+++. ..+++++.+|+.+ + .+ .||+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 45678999999999999999999875 479999999 8888877641 2479999999876 3 23 59999973
Q ss_pred -----hhhcc-------CChhH-------HHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 180 -----WILHN-------WNDEE-------SVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 180 -----~vlh~-------~~~~~-------~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.+++. |+.++ ..++|+++.+.|+ |||++++...
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lk---pGG~lv~stc 247 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLK---PGGILVYSTC 247 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEEES
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEEeC
Confidence 23332 22222 2589999999999 7999988664
No 193
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.09 E-value=6.7e-11 Score=95.92 Aligned_cols=95 Identities=12% Similarity=0.197 Sum_probs=76.1
Q ss_pred CEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CC-CCeEEeeCCCCC---CC--Cccceeeehh
Q 023625 115 KSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TN-DNLDFLGGNMFE---AI--PQANAVLLKW 180 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~-~ri~~~~~d~~~---~~--~~~D~v~~~~ 180 (279)
.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ .. ++++++.+|..+ .. ..||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 3999999999999999999875 789999999 888888874 33 589999999865 23 3599998854
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
. ......+++++.+.|+ |||.+++.+..+
T Consensus 138 ~-----~~~~~~~l~~~~~~Lk---pGG~lv~dn~~~ 166 (221)
T 3dr5_A 138 S-----PMDLKALVDAAWPLLR---RGGALVLADALL 166 (221)
T ss_dssp C-----TTTHHHHHHHHHHHEE---EEEEEEETTTTG
T ss_pred c-----HHHHHHHHHHHHHHcC---CCcEEEEeCCCC
Confidence 3 2345678999999999 799887755444
No 194
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.09 E-value=3.8e-10 Score=91.59 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=76.8
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHC-----CCCeEEEeeC-hhHHhhcccC----------CCCeEEeeCCCCCCC----
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAF-----PDIKCTVFDL-PHVVDNLQGT----------NDNLDFLGGNMFEAI---- 170 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~~----------~~ri~~~~~d~~~~~---- 170 (279)
..+..+|||||||+|.++..+++.. |..+++++|+ +.+++.+++. .++++++.+|..+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4567899999999999999999986 5679999999 8888877641 368999999998743
Q ss_pred ---CccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 171 ---PQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 171 ---~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
..||+|++...+|++ ++++.+.|+ |||++++.-.
T Consensus 158 ~~~~~fD~I~~~~~~~~~--------~~~~~~~Lk---pgG~lv~~~~ 194 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL--------PEILVDLLA---ENGKLIIPIE 194 (227)
T ss_dssp HHHCCEEEEEECSBBSSC--------CHHHHHHEE---EEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH--------HHHHHHhcC---CCcEEEEEEc
Confidence 249999999888754 467788899 7999888654
No 195
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.09 E-value=1.4e-10 Score=95.14 Aligned_cols=100 Identities=17% Similarity=0.225 Sum_probs=79.8
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC--C-C---------
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE--A-I--------- 170 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~--~-~--------- 170 (279)
..+..+|||||||+|..+..+++..| ..+++++|. +.+++.+++ ..+++++..+|..+ + .
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 34678999999999999999999987 689999999 888887764 23469999999764 1 1
Q ss_pred --------CccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 171 --------PQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 171 --------~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
..||+|++... .+....+++++.+.|+ |||.+++.+..++
T Consensus 138 ~~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~---pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLK---PGGLLIADNVLWD 185 (239)
T ss_dssp GTTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEE---EEEEEEEECSSGG
T ss_pred cccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcC---CCeEEEEEccccC
Confidence 45999998643 3455688999999999 7999888665443
No 196
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.08 E-value=1.1e-09 Score=88.39 Aligned_cols=96 Identities=11% Similarity=0.069 Sum_probs=78.1
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-CCC-ccceeeehhhhcc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-AIP-QANAVLLKWILHN 184 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~ 184 (279)
.+..+|||||||+|.++..+. |..+++++|+ +.+++.++. ...+..+...|... +.+ .+|++++.-++|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 467899999999999999877 8899999999 899988875 35678899999987 444 5999999989998
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+.+++....+ ++.+.|+ +++.++-+.
T Consensus 181 LE~q~~~~~~-~ll~aL~---~~~vvVsfP 206 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLN---TPRMAVSFP 206 (253)
T ss_dssp HHHHSTTHHH-HHHHHCB---CSEEEEEEE
T ss_pred hhhhchhhHH-HHHHHhc---CCCEEEEcC
Confidence 8877655555 8888999 455444433
No 197
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.07 E-value=2.7e-10 Score=90.24 Aligned_cols=102 Identities=11% Similarity=0.258 Sum_probs=73.6
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhcccCCCCeEEeeCCCCCCC-----------
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQGTNDNLDFLGGNMFEAI----------- 170 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~~~----------- 170 (279)
++.+.+. .+.+..+|||+|||+|.++..++++ ..+++++|+.+. .. ..+++++.+|+.+..
T Consensus 15 ei~~~~~-~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~----~~-~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 15 FLLDRYR-VVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM----EE-IAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp HHHHHHC-CSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC----CC-CTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred HHHHHcC-CCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc----cc-CCCeEEEEccccCHHHHHHHHHHhhc
Confidence 3444443 2467789999999999999999988 779999999433 12 268999999998732
Q ss_pred ---Cccceeeehhhhcc---------CChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 171 ---PQANAVLLKWILHN---------WNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 171 ---~~~D~v~~~~vlh~---------~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
..||+|++...... ..-+.+..+|+.+.++|+ |||.+++..
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lk---pGG~lv~k~ 139 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLR---NGGNVLLKQ 139 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEEE
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHcc---CCCEEEEEE
Confidence 36999998432110 111234578999999999 799888644
No 198
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.07 E-value=7.6e-11 Score=94.14 Aligned_cols=97 Identities=11% Similarity=0.164 Sum_probs=75.0
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CC---CCeEEeeCCCCC--CC---Cc-cceeee
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TN---DNLDFLGGNMFE--AI---PQ-ANAVLL 178 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~---~ri~~~~~d~~~--~~---~~-~D~v~~ 178 (279)
+..+|||+|||+|.++..++++.. .+++++|+ +.+++.|++ .. ++++++.+|+.+ +. .. ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 467999999999999998887643 58999999 889988874 11 589999999865 21 36 999999
Q ss_pred hhhhccCChhHHHHHHHHH--HHhCCCCCCCcEEEEEeee
Q 023625 179 KWILHNWNDEESVKLLKKC--KEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~--~~~L~~~~pgG~lli~e~~ 216 (279)
...+| . .+...+++.+ .++|+ |||.+++....
T Consensus 132 ~~~~~-~--~~~~~~l~~~~~~~~Lk---pgG~l~i~~~~ 165 (201)
T 2ift_A 132 DPPFH-F--NLAEQAISLLCENNWLK---PNALIYVETEK 165 (201)
T ss_dssp CCCSS-S--CHHHHHHHHHHHTTCEE---EEEEEEEEEES
T ss_pred CCCCC-C--ccHHHHHHHHHhcCccC---CCcEEEEEECC
Confidence 87755 2 3345778888 56799 79988876544
No 199
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.06 E-value=2e-10 Score=93.41 Aligned_cols=93 Identities=15% Similarity=0.242 Sum_probs=75.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCC------CCeEEEeeC-hhHHhhcccC----------CCCeEEeeCCCCCCCC--
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFP------DIKCTVFDL-PHVVDNLQGT----------NDNLDFLGGNMFEAIP-- 171 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p------~~~~~~~D~-~~~~~~a~~~----------~~ri~~~~~d~~~~~~-- 171 (279)
..+..+|||||||+|.++..+++..+ ..+++++|+ +.+++.+++. ..+++++.+|..++.+
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 45678999999999999999999765 368999999 8888877641 3689999999987443
Q ss_pred -ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 172 -QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 172 -~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.||+|++...+|++. +++.+.|+ |||++++.-
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~Lk---pgG~lvi~~ 194 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLA---SGGRLIVPV 194 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEE---EEEEEEEEE
T ss_pred CCccEEEECCchHHHH--------HHHHHHhc---CCCEEEEEE
Confidence 499999999888654 56788899 799888754
No 200
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.05 E-value=5.1e-10 Score=93.59 Aligned_cols=100 Identities=16% Similarity=0.183 Sum_probs=80.8
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCCC-CC-ccceeeehhhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFEA-IP-QANAVLLKWIL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~~-~~-~~D~v~~~~vl 182 (279)
+.+..+|||+|||+|.++..+++..+..+++++|+ +.+++.+++ .-.+++++.+|+.+. .. .||+|++....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 45678999999999999999999988889999999 888888774 125789999999773 32 59999986442
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCC
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIEN 219 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~ 219 (279)
....+++++.+.|+ |||.+++.+....+
T Consensus 197 ------~~~~~l~~~~~~Lk---pgG~l~~s~~~~~~ 224 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLK---DRGVIHYHETVAEK 224 (272)
T ss_dssp ------SGGGGHHHHHHHEE---EEEEEEEEEEEEGG
T ss_pred ------cHHHHHHHHHHHcC---CCCEEEEEEcCccc
Confidence 34567899999999 79999987765543
No 201
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.05 E-value=4.9e-10 Score=91.80 Aligned_cols=99 Identities=15% Similarity=0.159 Sum_probs=78.9
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC--C-C-------Cc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE--A-I-------PQ 172 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~--~-~-------~~ 172 (279)
..+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ ..++++++.+|..+ + . ..
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 34578999999999999999999987 789999999 888888763 33589999999865 2 1 35
Q ss_pred cceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 173 ANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
||+|++.. .......+++++.+.|+ |||.+++.+..+
T Consensus 148 fD~I~~d~-----~~~~~~~~l~~~~~~L~---pGG~lv~d~~~~ 184 (237)
T 3c3y_A 148 YDFGFVDA-----DKPNYIKYHERLMKLVK---VGGIVAYDNTLW 184 (237)
T ss_dssp EEEEEECS-----CGGGHHHHHHHHHHHEE---EEEEEEEECTTG
T ss_pred cCEEEECC-----chHHHHHHHHHHHHhcC---CCeEEEEecCCc
Confidence 99999753 34456789999999999 789877655433
No 202
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.04 E-value=9.3e-10 Score=95.64 Aligned_cols=95 Identities=21% Similarity=0.341 Sum_probs=71.9
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc------CCCCeEEeeCCCCC-CCC-ccceeeehhhhcc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG------TNDNLDFLGGNMFE-AIP-QANAVLLKWILHN 184 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~ 184 (279)
++++|||||||+|.+++..+++. ..+++++|..++++.|++ ..++|+++.+|+.+ +.| .+|+|++-..-+.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 46799999999999998777653 347999999667776663 46899999999987 566 5999987443332
Q ss_pred C-ChhHHHHHHHHHHHhCCCCCCCcEEE
Q 023625 185 W-NDEESVKLLKKCKEAIPSKDEGGKVI 211 (279)
Q Consensus 185 ~-~~~~~~~~L~~~~~~L~~~~pgG~ll 211 (279)
+ .......++....+.|+ |||.++
T Consensus 162 l~~e~~l~~~l~a~~r~Lk---p~G~~i 186 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLK---EGGLLL 186 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEE---EEEEEE
T ss_pred ccccchhhhHHHHHHhhCC---CCceEC
Confidence 2 23345678888889999 788765
No 203
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.04 E-value=1.7e-09 Score=88.85 Aligned_cols=93 Identities=16% Similarity=0.254 Sum_probs=76.0
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCC-C--ccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAI-P--QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~-~--~~D~v~~~~ 180 (279)
..+..+|||+|||+|.++..+++. ..+++++|+ +..++.+++ ..+++++..+|+.+.. + .||+|++.
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~- 165 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD- 165 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC-
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC-
Confidence 456789999999999999999998 679999999 888887764 2368999999998854 3 59999972
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.++. ..+++++.++|+ |||++++...
T Consensus 166 ----~~~~--~~~l~~~~~~L~---~gG~l~~~~~ 191 (248)
T 2yvl_A 166 ----VREP--WHYLEKVHKSLM---EGAPVGFLLP 191 (248)
T ss_dssp ----SSCG--GGGHHHHHHHBC---TTCEEEEEES
T ss_pred ----CcCH--HHHHHHHHHHcC---CCCEEEEEeC
Confidence 2332 467999999999 7999998764
No 204
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.04 E-value=2.8e-11 Score=99.30 Aligned_cols=137 Identities=14% Similarity=0.124 Sum_probs=95.5
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----C--CCCeEEeeCCCCC-CC-Cccceeeehhhh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----T--NDNLDFLGGNMFE-AI-PQANAVLLKWIL 182 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~--~~ri~~~~~d~~~-~~-~~~D~v~~~~vl 182 (279)
.+..+|||+|||+|.++..+++.. .+++++|+ +.+++.++. . .++++++.+|+.+ +. ..||+|++..++
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPW 154 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCC
T ss_pred cCCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCc
Confidence 367899999999999999999974 78999999 888888774 1 2589999999987 32 369999999988
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCce
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSH 262 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~ 262 (279)
|...+.. ..+.+++++|+ |||.+++ +......... ..-+ -+....+++.+++...|...
T Consensus 155 ~~~~~~~--~~~~~~~~~L~---pgG~~i~-~~~~~~~~~~--------~~~l-------p~~~~~~~~~~~l~~~g~~~ 213 (241)
T 3gdh_A 155 GGPDYAT--AETFDIRTMMS---PDGFEIF-RLSKKITNNI--------VYFL-------PRNADIDQVASLAGPGGQVE 213 (241)
T ss_dssp SSGGGGG--SSSBCTTTSCS---SCHHHHH-HHHHHHCSCE--------EEEE-------ETTBCHHHHHHTTCTTCCEE
T ss_pred CCcchhh--hHHHHHHhhcC---CcceeHH-HHHHhhCCce--------EEEC-------CCCCCHHHHHHHhccCCCEE
Confidence 8766543 36778899999 7997443 3211100000 0000 11225677888888888766
Q ss_pred eEEEecCCc
Q 023625 263 YKITPMLGV 271 (279)
Q Consensus 263 ~~~~~~~~~ 271 (279)
++.....+.
T Consensus 214 i~~~~~~~~ 222 (241)
T 3gdh_A 214 IEQNFLNNK 222 (241)
T ss_dssp EEEEEETTE
T ss_pred EEehhhcCc
Confidence 655555443
No 205
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.03 E-value=2.2e-10 Score=99.42 Aligned_cols=95 Identities=14% Similarity=0.094 Sum_probs=74.6
Q ss_pred CCCCEEEEecCC------ccHHHHHHHHH-CCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CC--------Cccc
Q 023625 112 EGLKSLVDVAGG------TGIMARAIATA-FPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AI--------PQAN 174 (279)
Q Consensus 112 ~~~~~vlDvG~G------~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~--------~~~D 174 (279)
.+..+||||||| +|..+..++++ +|+.+++++|+ +.+. . ..++++|+.+|+.+ ++ ..||
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~-~~~rI~fv~GDa~dlpf~~~l~~~d~sFD 290 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---V-DELRIRTIQGDQNDAEFLDRIARRYGPFD 290 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---G-CBTTEEEEECCTTCHHHHHHHHHHHCCEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---h-cCCCcEEEEecccccchhhhhhcccCCcc
Confidence 356899999999 67777777765 59999999999 6652 1 23799999999987 33 3599
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
+|++.. .|.+ ++..+.|++++++|| |||.+++.|..
T Consensus 291 lVisdg-sH~~--~d~~~aL~el~rvLK---PGGvlVi~Dl~ 326 (419)
T 3sso_A 291 IVIDDG-SHIN--AHVRTSFAALFPHVR---PGGLYVIEDMW 326 (419)
T ss_dssp EEEECS-CCCH--HHHHHHHHHHGGGEE---EEEEEEEECGG
T ss_pred EEEECC-cccc--hhHHHHHHHHHHhcC---CCeEEEEEecc
Confidence 999754 5654 345789999999999 79999888765
No 206
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.02 E-value=2e-10 Score=93.84 Aligned_cols=99 Identities=15% Similarity=0.248 Sum_probs=79.1
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC--C-C------Cccc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE--A-I------PQAN 174 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~--~-~------~~~D 174 (279)
.+..+|||||||+|..+..+++..| +.+++++|. +..++.|++ ..++++++.+|..+ + . ..||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 4567999999999999999999987 689999999 888888764 23589999999753 1 1 4599
Q ss_pred eeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 175 AVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 175 ~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
+|++... ..+...+++++.+.|+ |||.+++.+..+.
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~Lk---pgG~lv~~~~~~~ 186 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLR---RGGLMVIDNVLWH 186 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEE---EEEEEEEECTTGG
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcC---CCeEEEEeCCCcC
Confidence 9997543 3456789999999999 7998888665543
No 207
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.02 E-value=7.5e-10 Score=89.77 Aligned_cols=93 Identities=16% Similarity=0.186 Sum_probs=75.1
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccC----------CCCeEEeeCCCCCCC---Cccce
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQGT----------NDNLDFLGGNMFEAI---PQANA 175 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~----------~~ri~~~~~d~~~~~---~~~D~ 175 (279)
..+..+|||||||+|..+..+++.. |..+++++|+ +.+++.+++. .++++++.+|..... ..||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 4567899999999999999999985 6679999999 8888877631 358999999987632 25999
Q ss_pred eeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 176 VLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 176 v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
|++...++++ ++++.+.|+ |||++++..
T Consensus 155 i~~~~~~~~~--------~~~~~~~Lk---pgG~lv~~~ 182 (226)
T 1i1n_A 155 IHVGAAAPVV--------PQALIDQLK---PGGRLILPV 182 (226)
T ss_dssp EEECSBBSSC--------CHHHHHTEE---EEEEEEEEE
T ss_pred EEECCchHHH--------HHHHHHhcC---CCcEEEEEE
Confidence 9998887654 357788999 799988864
No 208
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.02 E-value=5.9e-10 Score=88.22 Aligned_cols=97 Identities=15% Similarity=0.232 Sum_probs=72.3
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCC---------CeEEEeeChhHHhhcccCCCCeEEe-eCCCCC-C--------CC
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPD---------IKCTVFDLPHVVDNLQGTNDNLDFL-GGNMFE-A--------IP 171 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~---------~~~~~~D~~~~~~~a~~~~~ri~~~-~~d~~~-~--------~~ 171 (279)
+.+..+|||+|||+|.++..++++++. .+++++|+.++. .. .+++++ .+|+.+ + .+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----PL-EGATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----CC-TTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----cC-CCCeEEEeccCCCHHHHHHHHHhcC
Confidence 456789999999999999999999865 799999995421 12 578899 999876 2 12
Q ss_pred --ccceeeehhhhcc----CChhH-----HHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 172 --QANAVLLKWILHN----WNDEE-----SVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 172 --~~D~v~~~~vlh~----~~~~~-----~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.||+|++...+|. ..+.. ...+++++.++|+ |||++++...
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~lv~~~~ 146 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQ---PGGTFLCKTW 146 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEEEC
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhc---CCCEEEEEec
Confidence 5999998554432 12211 1478999999999 7999987653
No 209
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.02 E-value=2.6e-10 Score=95.87 Aligned_cols=99 Identities=11% Similarity=0.126 Sum_probs=77.6
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCCC---CC-ccceee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFEA---IP-QANAVL 177 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~~---~~-~~D~v~ 177 (279)
+...+|||||||+|..+..+++..|..+++++|+ +.+++.+++. .+|++++.+|..+. .+ .||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 3568999999999999999999878889999999 8888887741 36899999998652 23 599999
Q ss_pred ehhhhccCChhHH--HHHHHHHHHhCCCCCCCcEEEEE
Q 023625 178 LKWILHNWNDEES--VKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 178 ~~~vlh~~~~~~~--~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
+....+..+.+.. ..++++++++|+ |||.+++.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~---pgG~lv~~ 191 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALK---PNGYCVAQ 191 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEE---EEEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcC---CCcEEEEE
Confidence 8544332222222 589999999999 79988775
No 210
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.02 E-value=1.5e-09 Score=94.17 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=82.0
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-CC--
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-AI-- 170 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~~-- 170 (279)
..++.... +.+..+|||+|||+|.++++++... |..+++++|+ +.+++.|+.. -+++++..+|+.+ +.
T Consensus 193 ~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 193 QALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC
T ss_pred HHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc
Confidence 33444443 5677899999999999999999988 8899999999 8999888741 1389999999987 33
Q ss_pred CccceeeehhhhccCCh--h----HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 171 PQANAVLLKWILHNWND--E----ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 171 ~~~D~v~~~~vlh~~~~--~----~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+.+|+|++.-..+.... . ....+++++.+.|+ |||+++++.
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lk---pgG~l~i~t 317 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLP---PGGRVALLT 317 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSC---TTCEEEEEE
T ss_pred CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcC---CCcEEEEEe
Confidence 35899998543322111 1 22678999999999 799998864
No 211
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.00 E-value=2.5e-10 Score=97.26 Aligned_cols=100 Identities=18% Similarity=0.194 Sum_probs=74.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCCC----CCccceee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFEA----IPQANAVL 177 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~~----~~~~D~v~ 177 (279)
+...+|||||||+|..+..+++..|..+++++|+ +.+++.|++. .+|++++.+|..+. ...||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 3567999999999999999999888889999999 8888887741 46899999998652 23599999
Q ss_pred ehhhhccCChhHH--HHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 178 LKWILHNWNDEES--VKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 178 ~~~vlh~~~~~~~--~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+...-+.-++... ..++++++++|+ |||.+++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~Lk---pgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALK---EDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEE---EEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcC---CCeEEEEEC
Confidence 8543322122221 688999999999 799887753
No 212
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.00 E-value=3e-10 Score=97.57 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=76.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCC---CC--Ccccee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFE---AI--PQANAV 176 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~---~~--~~~D~v 176 (279)
....+|||||||+|..+..+++..|..+++++|+ +.+++.|++. .+|++++.+|..+ .. ..||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4568999999999999999999888889999999 8888887741 3689999999765 22 259999
Q ss_pred eehhhhccCChhH--HHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 177 LLKWILHNWNDEE--SVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 177 ~~~~vlh~~~~~~--~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
++....+....+. ...++++++++|+ |||.+++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~Lk---pgG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALR---PGGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEE---EEEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcC---CCcEEEEe
Confidence 9854321111111 3689999999999 79988774
No 213
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.00 E-value=3.5e-10 Score=96.50 Aligned_cols=100 Identities=14% Similarity=0.136 Sum_probs=78.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----------CCCeEEeeCCCCCC----CCcccee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----------NDNLDFLGGNMFEA----IPQANAV 176 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~ri~~~~~d~~~~----~~~~D~v 176 (279)
+...+|||||||+|..+..+++..|..+++++|+ +.+++.+++. .+|++++.+|..+. ...||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 3568999999999999999999878889999999 8888877631 36899999998652 2359999
Q ss_pred eehhhhcc---CChhH--HHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 177 LLKWILHN---WNDEE--SVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 177 ~~~~vlh~---~~~~~--~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
++....|. -+.+. ...++++++++|+ |||.+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lk---pgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLN---PGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEE---EEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcC---CCcEEEEEc
Confidence 99765543 11111 3688999999999 799888764
No 214
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.99 E-value=7.8e-10 Score=93.87 Aligned_cols=96 Identities=9% Similarity=0.088 Sum_probs=69.4
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-----hhHHhhcc-c-C-CCCeEEeeC-CCCC-CCCccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-----PHVVDNLQ-G-T-NDNLDFLGG-NMFE-AIPQANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~-~-~-~~ri~~~~~-d~~~-~~~~~D~v~~~~ 180 (279)
+.+..+|||||||+|.++..++++ .+++++|+ +..++... . . .++++++.+ |+.. +...||+|++..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 456789999999999999999987 47999997 43333222 1 1 257999999 9887 444699999865
Q ss_pred hhc---cCChhH-HHHHHHHHHHhCCCCCCCcEEEE
Q 023625 181 ILH---NWNDEE-SVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 181 vlh---~~~~~~-~~~~L~~~~~~L~~~~pgG~lli 212 (279)
.++ ...+.. ...+|+.+.++|+ |||.+++
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~Lk---pGG~~v~ 189 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLS---NNTQFCV 189 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCC---TTCEEEE
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhC---CCCEEEE
Confidence 543 122222 2368999999999 7997776
No 215
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.99 E-value=3.6e-10 Score=94.99 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=74.8
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc---------------CCCCeEEeeCCCCCC---CCc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG---------------TNDNLDFLGGNMFEA---IPQ 172 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------------~~~ri~~~~~d~~~~---~~~ 172 (279)
....+|||||||+|.++..+++. |..+++++|+ +.+++.|++ ..+|++++.+|..+. ...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 35689999999999999999998 8889999999 888887763 136899999997542 235
Q ss_pred cceeeehhhhccCChhH--HHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 173 ANAVLLKWILHNWNDEE--SVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~--~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
||+|++....+..+... ...++++++++|+ |||.+++.
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~---pgG~lv~~ 192 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALN---NPGIYVTQ 192 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEE---EEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcC---CCcEEEEE
Confidence 99999865433222222 2678999999999 79988775
No 216
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.99 E-value=3.3e-10 Score=94.87 Aligned_cols=99 Identities=17% Similarity=0.174 Sum_probs=76.5
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc--------C-CCCeEEeeCCCCC--C-C-Cccceee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG--------T-NDNLDFLGGNMFE--A-I-PQANAVL 177 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------~-~~ri~~~~~d~~~--~-~-~~~D~v~ 177 (279)
+...+|||||||+|.++.++++..+..+++++|+ +.+++.|++ . .+|++++.+|..+ + . ..||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3468999999999999999998877789999999 889888774 1 4699999999865 2 2 3599999
Q ss_pred ehhhhccCChhH--HHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 178 LKWILHNWNDEE--SVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 178 ~~~vlh~~~~~~--~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
+....+..+... ...++++++++|+ |||.+++.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~---pgG~lv~~ 188 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALK---EDGIFVAQ 188 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEE---EEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcC---CCcEEEEE
Confidence 854433222111 2478999999999 78987764
No 217
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.99 E-value=6e-10 Score=88.95 Aligned_cols=97 Identities=11% Similarity=0.136 Sum_probs=73.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC--CC--Cccceeeehhhh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE--AI--PQANAVLLKWIL 182 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~--~~--~~~D~v~~~~vl 182 (279)
+..+|||+|||+|.++..++++.. .+++++|+ +.+++.+++. .++++++.+|+.+ +. ..||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 467999999999999999887753 38999999 8999888741 1589999999865 32 259999987765
Q ss_pred ccCChhHHHHHHHHHHH--hCCCCCCCcEEEEEeee
Q 023625 183 HNWNDEESVKLLKKCKE--AIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~--~L~~~~pgG~lli~e~~ 216 (279)
| . .....+++.+.+ +|+ |||.+++....
T Consensus 133 ~-~--~~~~~~l~~l~~~~~L~---pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-R--GLLEETINLLEDNGWLA---DEALIYVESEV 162 (202)
T ss_dssp S-T--TTHHHHHHHHHHTTCEE---EEEEEEEEEEG
T ss_pred C-C--CcHHHHHHHHHhcCccC---CCcEEEEEECC
Confidence 5 2 233466777765 499 79988776543
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.99 E-value=3e-10 Score=97.23 Aligned_cols=98 Identities=11% Similarity=0.144 Sum_probs=76.2
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCCC---C-Cccceee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFEA---I-PQANAVL 177 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~~---~-~~~D~v~ 177 (279)
+...+|||||||+|..+..+++..|..+++++|+ +.+++.+++. .+|++++.+|..+. . ..||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 3467999999999999999999878889999999 8888887641 36899999998652 2 3599999
Q ss_pred ehhhhccCCh-hHH--HHHHHHHHHhCCCCCCCcEEEEE
Q 023625 178 LKWILHNWND-EES--VKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 178 ~~~vlh~~~~-~~~--~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
+...-+ +.+ +.. .+++++++++|+ |||.+++.
T Consensus 195 ~d~~~p-~~~~~~l~~~~~l~~~~~~Lk---pgG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDP-IGPAETLFNQNFYEKIYNALK---PNGYCVAQ 229 (321)
T ss_dssp EECCCS-SSGGGGGSSHHHHHHHHHHEE---EEEEEEEE
T ss_pred ECCcCC-CCcchhhhHHHHHHHHHHhcC---CCcEEEEE
Confidence 854222 222 221 688999999999 78988774
No 219
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.99 E-value=3.2e-10 Score=96.23 Aligned_cols=100 Identities=14% Similarity=0.122 Sum_probs=75.2
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCC--C--CCccceee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFE--A--IPQANAVL 177 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~--~--~~~~D~v~ 177 (279)
....+|||||||+|..+..++++.|..+++++|+ +.+++.|++. .+|++++.+|..+ + ...||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999999888889999999 8888887641 4789999999865 2 23599999
Q ss_pred ehhhhccCChh--HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 178 LKWILHNWNDE--ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 178 ~~~vlh~~~~~--~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+....+..+.. ....++++++++|+ |||.+++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~Lk---pgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALK---EDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEE---EEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccC---CCeEEEEec
Confidence 85443322111 12478999999999 799887754
No 220
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.98 E-value=9.7e-10 Score=87.43 Aligned_cols=89 Identities=17% Similarity=0.254 Sum_probs=68.3
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHH
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEES 190 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~ 190 (279)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++...+++++.+|+.+-...||+|++...+|.+.+...
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~~~~ 128 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPPFGSVVKHSD 128 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCCC-------C
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCeeEEEECCCchhccCchh
Confidence 35679999999999999999987 5557999999 889998886434899999999872246999999999998876555
Q ss_pred HHHHHHHHHhC
Q 023625 191 VKLLKKCKEAI 201 (279)
Q Consensus 191 ~~~L~~~~~~L 201 (279)
.++++++.+.+
T Consensus 129 ~~~l~~~~~~~ 139 (200)
T 1ne2_A 129 RAFIDKAFETS 139 (200)
T ss_dssp HHHHHHHHHHE
T ss_pred HHHHHHHHHhc
Confidence 67888888775
No 221
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.97 E-value=4.5e-10 Score=94.56 Aligned_cols=102 Identities=20% Similarity=0.303 Sum_probs=75.1
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC------CCCeEEeeCCCCC-CCCc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT------NDNLDFLGGNMFE-AIPQ 172 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~ri~~~~~d~~~-~~~~ 172 (279)
..+++.++ ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++. .++++++.+|+.+ +.+.
T Consensus 18 ~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~ 93 (285)
T 1zq9_A 18 NSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPF 93 (285)
T ss_dssp HHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCC
T ss_pred HHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchh
Confidence 44555554 4567899999999999999999984 48999999 8888877641 2589999999987 6778
Q ss_pred cceeeehhhhccCChhHHHHHHH--------------HH--HHhCCCCCCCcEE
Q 023625 173 ANAVLLKWILHNWNDEESVKLLK--------------KC--KEAIPSKDEGGKV 210 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~L~--------------~~--~~~L~~~~pgG~l 210 (279)
+|+|++... ++|+.+....+|. ++ +.+++ |||++
T Consensus 94 fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlk---PGg~~ 143 (285)
T 1zq9_A 94 FDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAK---PGDKL 143 (285)
T ss_dssp CSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCC---TTCTT
T ss_pred hcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcC---CCCcc
Confidence 999888433 3455555555553 22 35789 79865
No 222
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.97 E-value=7.5e-10 Score=92.07 Aligned_cols=97 Identities=9% Similarity=0.007 Sum_probs=70.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhcccC-------CCCeEEe--eCCCCC-CCCccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQGT-------NDNLDFL--GGNMFE-AIPQANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~~ri~~~--~~d~~~-~~~~~D~v~~~~ 180 (279)
+.+..+|||||||+|.++..+++. .+++++|+.+++..+++. ..++.++ .+|+.+ +...||+|++..
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~ 148 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDV 148 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeC
Confidence 456789999999999999999887 689999994454433321 1168888 999987 433699999876
Q ss_pred hhccCChh-----HHHHHHHHHHHhCCCCCCCc--EEEEEe
Q 023625 181 ILHNWNDE-----ESVKLLKKCKEAIPSKDEGG--KVIIID 214 (279)
Q Consensus 181 vlh~~~~~-----~~~~~L~~~~~~L~~~~pgG--~lli~e 214 (279)
. +..+.. ....+|+.+.++|+ ||| .+++-.
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~Lk---pGG~~~fv~kv 185 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKV---KNPSADFVVKV 185 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHH---HCTTCEEEEEE
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhc---cCCCeEEEEEe
Confidence 5 332221 12348899999999 799 777744
No 223
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.96 E-value=6.4e-10 Score=93.02 Aligned_cols=97 Identities=13% Similarity=0.006 Sum_probs=70.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhcccC-------CCCeEEe--eCCCCC-CCCccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQGT-------NDNLDFL--GGNMFE-AIPQANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-------~~ri~~~--~~d~~~-~~~~~D~v~~~~ 180 (279)
+.+..+|||+|||+|.++..++++ .+++++|+.+++..+++. ..+++++ .+|+.+ +...||+|++..
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~ 156 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDI 156 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECC
Confidence 456789999999999999999987 589999994454433321 1168899 999876 433699999876
Q ss_pred hhccCChh-----HHHHHHHHHHHhCCCCCCCc--EEEEEe
Q 023625 181 ILHNWNDE-----ESVKLLKKCKEAIPSKDEGG--KVIIID 214 (279)
Q Consensus 181 vlh~~~~~-----~~~~~L~~~~~~L~~~~pgG--~lli~e 214 (279)
. +..+.. ....+|+.+.++|+ ||| .+++..
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~Lk---pGG~~~~v~~~ 193 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLE---YNQGCGFCVKV 193 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHH---HSTTCEEEEEE
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhc---cCCCcEEEEEe
Confidence 5 332221 12347899999999 799 877743
No 224
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.96 E-value=4.6e-09 Score=83.83 Aligned_cols=90 Identities=16% Similarity=0.159 Sum_probs=71.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----CCCeEEeeCCCCCCCCccceeeehhhhccCC
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----NDNLDFLGGNMFEAIPQANAVLLKWILHNWN 186 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~ 186 (279)
.+..+|||+|||+|.++..+++..+ .+++++|+ +.+++.++.. .-+++++.+|+.+-...||+|++.-.+|.+.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQR 126 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCcccc
Confidence 3567999999999999999998743 47999999 8888887742 1279999999987323699999988888776
Q ss_pred hhHHHHHHHHHHHhCC
Q 023625 187 DEESVKLLKKCKEAIP 202 (279)
Q Consensus 187 ~~~~~~~L~~~~~~L~ 202 (279)
......+|+++.+.+.
T Consensus 127 ~~~~~~~l~~~~~~l~ 142 (207)
T 1wy7_A 127 KHADRPFLLKAFEISD 142 (207)
T ss_dssp TTTTHHHHHHHHHHCS
T ss_pred CCchHHHHHHHHHhcC
Confidence 6555678888888763
No 225
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.96 E-value=3.8e-10 Score=103.94 Aligned_cols=103 Identities=12% Similarity=0.229 Sum_probs=81.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----C-CCCeEEeeCCCCC---CC-C-ccceeeeh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----T-NDNLDFLGGNMFE---AI-P-QANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~-~~ri~~~~~d~~~---~~-~-~~D~v~~~ 179 (279)
+.+..+|||||||.|.++..|++. +.+++++|. +.+++.|+. . ..+++|..++..+ +. + .||+|++.
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 456689999999999999999997 678999999 888888773 2 1368999998865 22 2 59999999
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
.+|||.++++....+.++.+.++ ++++.++...+..
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~---~~~~~~~~~~~~~ 177 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLA---DVTQAVILELAVK 177 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHH---HHSSEEEEECCCT
T ss_pred cchhcCCCHHHHHHHHHHHHHhc---cccceeeEEeccc
Confidence 99999998876666667777787 5777777665443
No 226
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.95 E-value=6.7e-09 Score=92.96 Aligned_cols=104 Identities=19% Similarity=0.207 Sum_probs=80.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCC-CeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC-C--CC--ccceeee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPD-IKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE-A--IP--QANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~-~--~~--~~D~v~~ 178 (279)
..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ...+++++.+|+.+ + .+ .||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 456789999999999999999999887 79999999 777776653 12579999999876 3 33 4999996
Q ss_pred ------hhhhccCChh-------HH-------HHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 179 ------KWILHNWNDE-------ES-------VKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 179 ------~~vlh~~~~~-------~~-------~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
..+++..++. +. .++|+++.+.|+ |||++++++...
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk---pGG~lvy~tcs~ 392 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVK---PGGRLLYTTCSI 392 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEE---EEEEEEEEESCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEeCCC
Confidence 3455544332 11 578999999999 799999877543
No 227
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.93 E-value=2e-09 Score=89.42 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=73.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCCCCCccceeeehhh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFEAIPQANAVLLKWI 181 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~~~~~~D~v~~~~v 181 (279)
+...+|||||||+|..+.++++. + .+++++|+ +.+++.|++. .+|++++.+|..+-...||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d-- 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL-- 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES--
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC--
Confidence 34579999999999999999998 7 89999999 8999988752 358999999987633569999985
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.+++. .++++++++|+ |||.+++.
T Consensus 147 ---~~dp~--~~~~~~~~~L~---pgG~lv~~ 170 (262)
T 2cmg_A 147 ---QEPDI--HRIDGLKRMLK---EDGVFISV 170 (262)
T ss_dssp ---SCCCH--HHHHHHHTTEE---EEEEEEEE
T ss_pred ---CCChH--HHHHHHHHhcC---CCcEEEEE
Confidence 23332 48999999999 79988774
No 228
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.91 E-value=1.4e-09 Score=91.96 Aligned_cols=98 Identities=13% Similarity=0.167 Sum_probs=73.6
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------CCCeEEeeCCCCC--C-C-Cccceeee
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------NDNLDFLGGNMFE--A-I-PQANAVLL 178 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~ri~~~~~d~~~--~-~-~~~D~v~~ 178 (279)
...+|||||||+|..+..+++..|..+++++|+ +.+++.+++. .++++++.+|..+ + . ..||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 457999999999999999999878889999999 8888877641 3689999999755 2 2 25999997
Q ss_pred hhhhccCChh---HHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 179 KWILHNWNDE---ESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 179 ~~vlh~~~~~---~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
...-+...+. ...+++++++++|+ |||.+++.
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~Lk---pgG~lv~~ 204 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALK---EDGVFSAE 204 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEE---EEEEEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcC---CCcEEEEE
Confidence 4322201111 12578999999999 79988774
No 229
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.89 E-value=6.2e-09 Score=86.83 Aligned_cols=121 Identities=14% Similarity=0.195 Sum_probs=90.4
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-C-CCccceeeehhh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-A-IPQANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~-~~~~D~v~~~~v 181 (279)
..++.+|||+|||+|.+++.++++ ...+++++|+ |..++.+++ ..+++++..+|..+ + ...||.|++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 457889999999999999999987 4568999999 888887763 46889999999987 3 235999987532
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCc
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFS 261 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~ 261 (279)
..+...|..+.++|+ |||.|.+.+.+..+... ....+.++++.++.|++
T Consensus 202 ------~~~~~~l~~a~~~lk---~gG~ih~~~~~~e~~~~----------------------~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 202 ------VRTHEFIPKALSIAK---DGAIIHYHNTVPEKLMP----------------------REPFETFKRITKEYGYD 250 (278)
T ss_dssp ------SSGGGGHHHHHHHEE---EEEEEEEEEEEEGGGTT----------------------TTTHHHHHHHHHHTTCE
T ss_pred ------CcHHHHHHHHHHHcC---CCCEEEEEeeecccccc----------------------hhHHHHHHHHHHHcCCc
Confidence 123467888889999 79988777665432111 11446678888999987
Q ss_pred ee
Q 023625 262 HY 263 (279)
Q Consensus 262 ~~ 263 (279)
+.
T Consensus 251 v~ 252 (278)
T 3k6r_A 251 VE 252 (278)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 230
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.89 E-value=1.1e-08 Score=87.83 Aligned_cols=98 Identities=11% Similarity=0.107 Sum_probs=73.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCC-CeEEeeCCCCCC-------CCccceee
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TND-NLDFLGGNMFEA-------IPQANAVL 177 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~-ri~~~~~d~~~~-------~~~~D~v~ 177 (279)
+..+|||+|||+|.++..+++.. .+++++|+ +.+++.+++ ..+ +++++.+|+++. ...||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 46799999999999999999864 38999999 888888774 223 599999998762 13599999
Q ss_pred ehhhhccC--------ChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 178 LKWILHNW--------NDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 178 ~~~vlh~~--------~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+.-..... ..++...+++++.++|+ |||.+++...
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lk---pgG~lli~~~ 273 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILS---PKALGLVLTA 273 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBC---TTCCEEEEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcC---cCcEEEEEEC
Confidence 83221000 12345689999999999 7998776553
No 231
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.88 E-value=2.3e-09 Score=90.87 Aligned_cols=89 Identities=15% Similarity=0.278 Sum_probs=64.3
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-CCCcc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-AIPQA 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~~~~~ 173 (279)
..+++... ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++. .++++++.+|+.+ +.+.|
T Consensus 32 ~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~ 107 (299)
T 2h1r_A 32 DKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKF 107 (299)
T ss_dssp HHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCCC
T ss_pred HHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcccC
Confidence 34444443 456789999999999999999987 468999999 8888877641 2689999999987 56689
Q ss_pred ceeeehhhhccCChhHHHHHH
Q 023625 174 NAVLLKWILHNWNDEESVKLL 194 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L 194 (279)
|+|++.-. +++..+....+|
T Consensus 108 D~Vv~n~p-y~~~~~~~~~ll 127 (299)
T 2h1r_A 108 DVCTANIP-YKISSPLIFKLI 127 (299)
T ss_dssp SEEEEECC-GGGHHHHHHHHH
T ss_pred CEEEEcCC-cccccHHHHHHH
Confidence 99988544 456666666666
No 232
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.86 E-value=6.3e-09 Score=90.89 Aligned_cols=122 Identities=10% Similarity=0.057 Sum_probs=89.9
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC--ccceeeehh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP--QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~--~~D~v~~~~ 180 (279)
+.+..+|||+|||+|.+++.+++..+..+++++|+ +.+++.|+. ..++++++.+|+.+ +.+ .||+|++.-
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 35678999999999999999999988778999999 899988874 23589999999987 443 599999954
Q ss_pred hhccCC------hhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHH
Q 023625 181 ILHNWN------DEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKL 254 (279)
Q Consensus 181 vlh~~~------~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~l 254 (279)
..+... .+.-.++++.++++|+ |+++++.. +.+.+.+.
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l~-----g~~~~i~~-------------------------------~~~~~~~~ 338 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVLE-----KRGVFITT-------------------------------EKKAIEEA 338 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHEE-----EEEEEEES-------------------------------CHHHHHHH
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHcC-----CeEEEEEC-------------------------------CHHHHHHH
Confidence 433211 1112567888888875 44444321 34567788
Q ss_pred HHHCCCceeEEEec
Q 023625 255 FLAAGFSHYKITPM 268 (279)
Q Consensus 255 l~~aGf~~~~~~~~ 268 (279)
+++.||+..+...+
T Consensus 339 ~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 339 IAENGFEIIHHRVI 352 (373)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHcCCEEEEEEEE
Confidence 89999998887665
No 233
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.84 E-value=5.3e-09 Score=87.48 Aligned_cols=104 Identities=11% Similarity=0.116 Sum_probs=77.1
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCC-CeEEEeeC-hhHHhhccc----C-CCCeEEeeCCCCC-C------CCcccee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPD-IKCTVFDL-PHVVDNLQG----T-NDNLDFLGGNMFE-A------IPQANAV 176 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~----~-~~ri~~~~~d~~~-~------~~~~D~v 176 (279)
..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ . ..+++++.+|+.+ + ...||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 456789999999999999999998876 79999999 787877663 1 2489999999875 2 2359999
Q ss_pred eeh------hhhcc---CCh-------hHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 177 LLK------WILHN---WND-------EESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 177 ~~~------~vlh~---~~~-------~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
++. .+++. |+. +...++|+++.+.|+ |||++++.....
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~lv~stcs~ 214 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLK---KDGELVYSTCSM 214 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEE---EEEEEEEEESCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECCC
Confidence 985 22221 122 123689999999999 799988866433
No 234
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.79 E-value=1.7e-08 Score=89.43 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=73.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCC--Cccceeeehhhhc-----
Q 023625 113 GLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAI--PQANAVLLKWILH----- 183 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~--~~~D~v~~~~vlh----- 183 (279)
...+|||+|||+|.++..+++++ +..+++++|+ +.+++.| .+++++.+|+.+.. ..||+|++.=...
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLLWEPGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGGCCCSSCEEEEEECCCCCCBSCT
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhhcCccCCCCEEEECcCccCcccc
Confidence 45699999999999999999987 6789999999 7777766 68999999998733 3699999841111
Q ss_pred -----cCChhH-----------------HHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 184 -----NWNDEE-----------------SVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 184 -----~~~~~~-----------------~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+..++. ...+++++.+.|+ |||+++++-+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk---~~G~~~~i~p 165 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLK---PGGVLVFVVP 165 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEE---EEEEEEEEEE
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhC---CCCEEEEEEC
Confidence 122221 1267899999999 7999887653
No 235
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.79 E-value=1.1e-08 Score=85.82 Aligned_cols=116 Identities=13% Similarity=0.044 Sum_probs=81.3
Q ss_pred hCCCCEEEEecC------CccHHHHHHHHHCC-CCeEEEeeChhHHhhcccCCCCeEE-eeCCCCC-CCC-ccceeeehh
Q 023625 111 FEGLKSLVDVAG------GTGIMARAIATAFP-DIKCTVFDLPHVVDNLQGTNDNLDF-LGGNMFE-AIP-QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~------G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~ri~~-~~~d~~~-~~~-~~D~v~~~~ 180 (279)
+.+..+|||+|| |+|. ..+++..| ..+++++|+.+. . .++++ +.+|+.+ +.+ .||+|++..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~------v-~~v~~~i~gD~~~~~~~~~fD~Vvsn~ 131 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF------V-SDADSTLIGDCATVHTANKWDLIISDM 131 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC------B-CSSSEEEESCGGGCCCSSCEEEEEECC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC------C-CCCEEEEECccccCCccCcccEEEEcC
Confidence 466789999999 5577 44566666 689999999433 1 47889 9999987 444 599999853
Q ss_pred hhcc-----C----ChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHH
Q 023625 181 ILHN-----W----NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDW 251 (279)
Q Consensus 181 vlh~-----~----~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~ 251 (279)
..+. . ..+....+|+.+.++|+ |||++++...... ...++
T Consensus 132 ~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lk---pGG~~v~~~~~~~----------------------------~~~~l 180 (290)
T 2xyq_A 132 YDPRTKHVTKENDSKEGFFTYLCGFIKQKLA---LGGSIAVKITEHS----------------------------WNADL 180 (290)
T ss_dssp CCCC---CCSCCCCCCTHHHHHHHHHHHHEE---EEEEEEEEECSSS----------------------------CCHHH
T ss_pred CccccccccccccchHHHHHHHHHHHHHhcC---CCcEEEEEEeccC----------------------------CHHHH
Confidence 2211 0 12234588999999999 7999887542110 12367
Q ss_pred HHHHHHCCCceeEEE
Q 023625 252 KKLFLAAGFSHYKIT 266 (279)
Q Consensus 252 ~~ll~~aGf~~~~~~ 266 (279)
.+++++.||..+++.
T Consensus 181 ~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 181 YKLMGHFSWWTAFVT 195 (290)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHHHcCCcEEEEE
Confidence 788888888876665
No 236
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.76 E-value=1.9e-08 Score=89.78 Aligned_cols=102 Identities=16% Similarity=0.164 Sum_probs=76.9
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCC-CeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCC-C--CC-ccceeee-
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPD-IKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFE-A--IP-QANAVLL- 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~-~--~~-~~D~v~~- 178 (279)
..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++. .. +.++.+|..+ + .+ .||+|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEEC
Confidence 456789999999999999999999875 68999999 8888777641 23 8999999765 2 23 5999996
Q ss_pred -----hhhh-------ccCChhHH-------HHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 179 -----KWIL-------HNWNDEES-------VKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 179 -----~~vl-------h~~~~~~~-------~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
..++ ..|++++. .++|+++.+.|+ |||+|++....
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk---pGG~LvysTCs 231 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLG---PGGVLVYSTCT 231 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEE---EEEEEEEEESC
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEecc
Confidence 1122 23333333 679999999999 79998876543
No 237
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.76 E-value=2.2e-08 Score=89.13 Aligned_cols=104 Identities=13% Similarity=0.200 Sum_probs=79.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCCC---CC--ccceeee--
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFEA---IP--QANAVLL-- 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~~---~~--~~D~v~~-- 178 (279)
..++.+|||+|||+|..+..+++..++.+++++|+ +..++.+++ ...+++++.+|+.+. .+ .||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 35678999999999999999999998889999999 777776653 234689999999863 22 5999986
Q ss_pred ----hhhhccCCh-------hHH-------HHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 179 ----KWILHNWND-------EES-------VKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 179 ----~~vlh~~~~-------~~~-------~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
..+++..++ ++. .++|+++.+.|+ |||++++.+..+
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lk---pGG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK---TGGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEE---EEEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcC---CCCEEEEEECCC
Confidence 234444333 222 488999999999 799998877443
No 238
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.75 E-value=1.9e-08 Score=82.62 Aligned_cols=83 Identities=11% Similarity=0.283 Sum_probs=59.9
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-CCC-ccc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-AIP-QAN 174 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~~~-~~D 174 (279)
..+++.++ ..+..+|||||||+|.++..++++. .+++++|+ +.+++.+++. .++++++.+|+.+ +.+ +.+
T Consensus 20 ~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~ 95 (244)
T 1qam_A 20 DKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQS 95 (244)
T ss_dssp HHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCC
T ss_pred HHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCC
Confidence 44554443 4567899999999999999999986 68999999 8888877642 2689999999987 555 233
Q ss_pred eeeehhhhccCCh
Q 023625 175 AVLLKWILHNWND 187 (279)
Q Consensus 175 ~v~~~~vlh~~~~ 187 (279)
..++++.-++++.
T Consensus 96 ~~vv~nlPy~~~~ 108 (244)
T 1qam_A 96 YKIFGNIPYNIST 108 (244)
T ss_dssp CEEEEECCGGGHH
T ss_pred eEEEEeCCcccCH
Confidence 3444444444433
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.74 E-value=1e-08 Score=88.60 Aligned_cols=99 Identities=12% Similarity=0.191 Sum_probs=79.1
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCC-----CeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCCCCC--ccceeeehh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPD-----IKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFEAIP--QANAVLLKW 180 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~-----~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~~~~--~~D~v~~~~ 180 (279)
+..+|+|+|||+|.++..+++..+. .+++++|+ +.+++.|+. ...++.+..+|.+.+.+ .||+|++.-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 209 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECC
Confidence 4579999999999999999998764 68999999 888888764 12378999999988543 599999987
Q ss_pred hhccCChhHH----------------HHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 181 ILHNWNDEES----------------VKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 181 vlh~~~~~~~----------------~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.++.++.++. ..+++++.+.|+ |||+++++.
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk---~gG~~~~v~ 256 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTK---PGGYLFFLV 256 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEE---EEEEEEEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhC---CCCEEEEEE
Confidence 7666654432 268999999999 799888765
No 240
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.68 E-value=2.8e-08 Score=88.51 Aligned_cols=103 Identities=12% Similarity=0.183 Sum_probs=75.9
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCC-CeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC-C--CC-ccceeeeh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPD-IKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE-A--IP-QANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~-~--~~-~~D~v~~~ 179 (279)
..+..+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ...++.++.+|..+ + .+ .||+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 456789999999999999999998664 68999999 878877663 12579999999865 2 23 59999872
Q ss_pred h------hhc-------cCChhH-------HHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 180 W------ILH-------NWNDEE-------SVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 180 ~------vlh-------~~~~~~-------~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
- +++ .|+.++ ..++|+++.+.|+ |||+|+.....
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk---pGG~LvYsTCs 236 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLK---NKGQLIYSTCT 236 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEE---EEEEEEEEESC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEee
Confidence 2 222 122221 1388999999999 79998876543
No 241
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.66 E-value=8.1e-09 Score=84.90 Aligned_cols=105 Identities=13% Similarity=0.230 Sum_probs=73.0
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-CCC---c
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-AIP---Q 172 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~~~---~ 172 (279)
..+++.++ ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++. .++++++.+|+.+ +.+ .
T Consensus 19 ~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~ 94 (245)
T 1yub_A 19 NQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQR 94 (245)
T ss_dssp HHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSE
T ss_pred HHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCC
Confidence 34555544 4567899999999999999999985 78999999 8888888753 3589999999987 544 3
Q ss_pred cceeeehhhhccCChhHHHHH----------H----HHHHHhCCCCCCCcEEEEEe
Q 023625 173 ANAVLLKWILHNWNDEESVKL----------L----KKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~----------L----~~~~~~L~~~~pgG~lli~e 214 (279)
| .|+ ++.-++.+.+....+ + +.+.+.|+ |||++.++.
T Consensus 95 f-~vv-~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~---~~G~l~v~~ 145 (245)
T 1yub_A 95 Y-KIV-GNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLD---IHRTLGLLL 145 (245)
T ss_dssp E-EEE-EECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHC---GGGSHHHHT
T ss_pred c-EEE-EeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhC---CCCchhhhh
Confidence 6 333 333233333322333 2 55788888 688876543
No 242
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.65 E-value=1.9e-07 Score=83.98 Aligned_cols=102 Identities=19% Similarity=0.296 Sum_probs=77.9
Q ss_pred CCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC-C--CC-ccceeeeh--
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE-A--IP-QANAVLLK-- 179 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~-~--~~-~~D~v~~~-- 179 (279)
+..+|||+|||+|..+..+++..+ ..+++++|+ +..++.+++ ...+++++.+|..+ + .+ .||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 678999999999999999999875 478999999 888877663 12579999999876 3 33 59999971
Q ss_pred ----hhhc-------cCChhH-------HHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 180 ----WILH-------NWNDEE-------SVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 180 ----~vlh-------~~~~~~-------~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
.+++ .|++++ ..++|+++.++|+ |||+|++....+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk---pGG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALR---PGGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEE---EEEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcC---CCCEEEEecccC
Confidence 2232 344332 2478999999999 799988876433
No 243
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.64 E-value=3.9e-07 Score=78.97 Aligned_cols=150 Identities=16% Similarity=0.237 Sum_probs=94.3
Q ss_pred CCEEEEecCCccHHHHHH--------HHHC-------CCCeEEEeeChhHH--------hhccc----------CCCC--
Q 023625 114 LKSLVDVAGGTGIMARAI--------ATAF-------PDIKCTVFDLPHVV--------DNLQG----------TNDN-- 158 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l--------~~~~-------p~~~~~~~D~~~~~--------~~a~~----------~~~r-- 158 (279)
.-+|+|+|||+|..+..+ .+++ |..++..-|+|..- ...++ ...+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 478999999999999887 3333 78899999985322 22211 0001
Q ss_pred -eEEeeCCCCC-CCC--ccceeeehhhhccCCh------------------------------------hHHHHHHHHHH
Q 023625 159 -LDFLGGNMFE-AIP--QANAVLLKWILHNWND------------------------------------EESVKLLKKCK 198 (279)
Q Consensus 159 -i~~~~~d~~~-~~~--~~D~v~~~~vlh~~~~------------------------------------~~~~~~L~~~~ 198 (279)
+.-+++.|.. .+| .+|+|+++.+||-+++ .|...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2346778877 455 5999999999997652 14456799999
Q ss_pred HhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhc-ch-----hhhhhc-----------C--CeeCCHHHHHHHHH-HC
Q 023625 199 EAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF-DI-----LMVSLF-----------R--GKERSVDDWKKLFL-AA 258 (279)
Q Consensus 199 ~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~-d~-----~~~~~~-----------~--~~~r~~~e~~~ll~-~a 258 (279)
+.|+ |||++++.-...++....... .....+ ++ .-++.. + -..++.+|++.+++ +.
T Consensus 213 ~eL~---pGG~mvl~~~gr~~~~~~~~~-~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~ 288 (374)
T 3b5i_A 213 AEVK---RGGAMFLVCLGRTSVDPTDQG-GAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANG 288 (374)
T ss_dssp HHEE---EEEEEEEEEEECCCSSTTCCH-HHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHC
T ss_pred HHhC---CCCEEEEEEecCCCCcccccc-chhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcC
Confidence 9999 799998877655442111000 000011 11 001111 1 22359999999998 59
Q ss_pred CCceeEEEe
Q 023625 259 GFSHYKITP 267 (279)
Q Consensus 259 Gf~~~~~~~ 267 (279)
||++..+..
T Consensus 289 ~F~I~~le~ 297 (374)
T 3b5i_A 289 SFAIDKLVV 297 (374)
T ss_dssp SEEEEEEEE
T ss_pred CcEEEEEEE
Confidence 999877643
No 244
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.64 E-value=3.1e-08 Score=87.24 Aligned_cols=99 Identities=11% Similarity=0.056 Sum_probs=74.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------C-CCCeEEeeCCCCCC-------CCcccee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------T-NDNLDFLGGNMFEA-------IPQANAV 176 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~ri~~~~~d~~~~-------~~~~D~v 176 (279)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++ . .++++++.+|+++. ...||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 467899999999999999999874 458999999 888888774 2 23899999998762 1259999
Q ss_pred eehhhhccC-------ChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 177 LLKWILHNW-------NDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 177 ~~~~vlh~~-------~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
++.-..... .......++.++.+.|+ |||.+++..
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~ 339 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLN---EGGILLTFS 339 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEE---EEEEEEEEE
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEe
Confidence 985221110 01345788999999999 789887754
No 245
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.63 E-value=7.3e-08 Score=81.10 Aligned_cols=89 Identities=13% Similarity=0.267 Sum_probs=66.0
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-CCCc--c
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-AIPQ--A 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~~~~--~ 173 (279)
..+++... ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++. .++++++.+|+.+ +.+. |
T Consensus 40 ~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~f 115 (295)
T 3gru_A 40 NKAVESAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDF 115 (295)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCC
T ss_pred HHHHHhcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCc
Confidence 44555554 556789999999999999999998 468999999 8888877642 3789999999998 6553 9
Q ss_pred ceeeehhhhccCChhHHHHHH
Q 023625 174 NAVLLKWILHNWNDEESVKLL 194 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L 194 (279)
|+|++.... +++.+-..++|
T Consensus 116 D~Iv~NlPy-~is~pil~~lL 135 (295)
T 3gru_A 116 NKVVANLPY-QISSPITFKLI 135 (295)
T ss_dssp SEEEEECCG-GGHHHHHHHHH
T ss_pred cEEEEeCcc-cccHHHHHHHH
Confidence 999866443 34444333333
No 246
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.63 E-value=2.4e-08 Score=87.49 Aligned_cols=98 Identities=15% Similarity=0.102 Sum_probs=74.4
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCC-------CCccceeeeh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEA-------IPQANAVLLK 179 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~-------~~~~D~v~~~ 179 (279)
+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|++. .++++++.+|..+. ...||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5679999999999999999998 568999999 8888887741 24599999998762 1259999983
Q ss_pred hhhccCCh-------hHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 180 WILHNWND-------EESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~-------~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
-.....+. +....+++++.+.|+ |||.+++...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~ 326 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLK---EGGILATASC 326 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEE---EEEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcC---CCCEEEEEEC
Confidence 22111111 345678999999999 7998887653
No 247
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.62 E-value=6.1e-08 Score=83.40 Aligned_cols=93 Identities=19% Similarity=0.274 Sum_probs=74.3
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCCCCccceeeehhhhcc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEAIPQANAVLLKWILHN 184 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~ 184 (279)
.+..+|||+|||+|.++.. ++ ...+++++|+ +.+++.+++ ..++++++.+|..+....||+|++.-.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP--- 267 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLP--- 267 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCT---
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCc---
Confidence 4678999999999999999 76 4678999999 888888774 236899999999874466999998421
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.....+++.+.+.|+ |||.+++.+..
T Consensus 268 ---~~~~~~l~~~~~~L~---~gG~l~~~~~~ 293 (336)
T 2yx1_A 268 ---KFAHKFIDKALDIVE---EGGVIHYYTIG 293 (336)
T ss_dssp ---TTGGGGHHHHHHHEE---EEEEEEEEEEE
T ss_pred ---HhHHHHHHHHHHHcC---CCCEEEEEEee
Confidence 123378999999999 79988887754
No 248
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.61 E-value=3e-08 Score=86.87 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=72.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCC-CeEEeeCCCCC--C-C----Ccccee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TND-NLDFLGGNMFE--A-I----PQANAV 176 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~-ri~~~~~d~~~--~-~----~~~D~v 176 (279)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++ ..+ +++|+.+|+++ + . ..||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 456899999999999999999863 238999999 888888774 223 89999999876 2 1 259999
Q ss_pred eehhhh-----ccCC--hhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 177 LLKWIL-----HNWN--DEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 177 ~~~~vl-----h~~~--~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
++.-.. +... .+...++++.+.+.|+ |||.+++..
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~---pgG~l~~~~ 331 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILS---ENGLIIAST 331 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEE---EEEEEEEEE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcC---CCcEEEEEe
Confidence 983221 1111 1234567888999999 789877654
No 249
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.60 E-value=5.3e-08 Score=85.69 Aligned_cols=99 Identities=18% Similarity=0.185 Sum_probs=75.1
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCCC-------CCccceeee
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFEA-------IPQANAVLL 178 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~~-------~~~~D~v~~ 178 (279)
+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ ..++++++.+|+++. ...||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 6789999999999999999987 4458999999 888887774 223899999998762 125999998
Q ss_pred hhhhccCCh-------hHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 179 KWILHNWND-------EESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 179 ~~vlh~~~~-------~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.-.....+. .....++.++.+.|+ |||.++++..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~lv~~~~ 336 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVK---DGGILVTCSC 336 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEE---EEEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEC
Confidence 422211111 445688999999999 7998887653
No 250
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.56 E-value=1.4e-07 Score=82.62 Aligned_cols=99 Identities=16% Similarity=0.091 Sum_probs=71.2
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----CCCeEEeeCCCCCC---CC-ccceeeehhhh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----NDNLDFLGGNMFEA---IP-QANAVLLKWIL 182 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~~ri~~~~~d~~~~---~~-~~D~v~~~~vl 182 (279)
.++.+|||+|||+|.++..+++.. .+++++|+ +.+++.+++. .-..++..+|.++. .+ .||+|++.-..
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred cCCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 347899999999999999999974 45999999 8888887741 12235678898762 12 49999984322
Q ss_pred ccCCh-------hHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 183 HNWND-------EESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 183 h~~~~-------~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
...+. ....++++.+.+.|+ |||.++++..
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~Lk---pGG~Lv~~s~ 327 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLA---EEGFLWLSSC 327 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEE---EEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcC---CCCEEEEEEC
Confidence 11111 233578999999999 7998886653
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.56 E-value=1.6e-07 Score=82.45 Aligned_cols=112 Identities=10% Similarity=0.081 Sum_probs=79.4
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCC--------------------------------------CeEEE
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPD--------------------------------------IKCTV 142 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~~ 142 (279)
..++.... +.+...|||.+||+|.++++.+....+ .++++
T Consensus 191 a~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 191 AALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 33444443 566789999999999999988876443 56999
Q ss_pred eeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC-ccceeeehhhhcc-CC-hhHHHHHHHHHHHhCCCCCCCcEEE
Q 023625 143 FDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP-QANAVLLKWILHN-WN-DEESVKLLKKCKEAIPSKDEGGKVI 211 (279)
Q Consensus 143 ~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~-~~-~~~~~~~L~~~~~~L~~~~pgG~ll 211 (279)
+|+ +.+++.|+. ..++++++.+|+.+ +.+ .||+|++.=..+. +. +++...+.+.+.+.|++. ||++++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~-~g~~~~ 347 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM-PTWSVY 347 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC-TTCEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC-CCCEEE
Confidence 999 899988874 34579999999987 444 5999998633221 11 245556677666666632 588888
Q ss_pred EEee
Q 023625 212 IIDM 215 (279)
Q Consensus 212 i~e~ 215 (279)
++..
T Consensus 348 iit~ 351 (393)
T 3k0b_A 348 VLTS 351 (393)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8764
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.56 E-value=4.6e-07 Score=79.16 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=81.9
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCC--------------------------------------CeEEE
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPD--------------------------------------IKCTV 142 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~~ 142 (279)
..++.... +.+...|+|.+||+|.++++.+....+ .++++
T Consensus 184 aall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 184 AAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 33444333 567789999999999999988875443 56999
Q ss_pred eeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC-ccceeeehhhhcc-C-ChhHHHHHHHHHHHhCCCCCCCcEEE
Q 023625 143 FDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP-QANAVLLKWILHN-W-NDEESVKLLKKCKEAIPSKDEGGKVI 211 (279)
Q Consensus 143 ~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~-~-~~~~~~~~L~~~~~~L~~~~pgG~ll 211 (279)
+|+ +.+++.|+. ..++++++.+|+.+ +.+ .+|+|++.=..+. + ..++...+.+.+.+.|++. ||++++
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~-~g~~~~ 340 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPL-KTWSQF 340 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTC-TTSEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhC-CCcEEE
Confidence 999 899988874 34679999999987 443 5999998633221 2 2356677888888888742 589888
Q ss_pred EEee
Q 023625 212 IIDM 215 (279)
Q Consensus 212 i~e~ 215 (279)
++..
T Consensus 341 iit~ 344 (384)
T 3ldg_A 341 ILTN 344 (384)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8764
No 253
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.54 E-value=8.3e-07 Score=78.95 Aligned_cols=91 Identities=18% Similarity=0.202 Sum_probs=65.4
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCC-------Cccceee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAI-------PQANAVL 177 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~-------~~~D~v~ 177 (279)
..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|+.. ..+++|+.+|+.+.. ..||+|+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 345679999999999999999987 578999999 8888887741 248999999998732 1499999
Q ss_pred ehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 178 LKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 178 ~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
+.- +...+..+++.+.+ ++ |++.+++
T Consensus 362 ~dP-----Pr~g~~~~~~~l~~-~~---p~~ivyv 387 (433)
T 1uwv_A 362 LDP-----ARAGAAGVMQQIIK-LE---PIRIVYV 387 (433)
T ss_dssp ECC-----CTTCCHHHHHHHHH-HC---CSEEEEE
T ss_pred ECC-----CCccHHHHHHHHHh-cC---CCeEEEE
Confidence 732 22222345555544 56 5665554
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.51 E-value=1.1e-07 Score=81.64 Aligned_cols=98 Identities=16% Similarity=0.175 Sum_probs=70.1
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---------C----CCeEEeeCCCCC--C-----C
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---------N----DNLDFLGGNMFE--A-----I 170 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~----~ri~~~~~d~~~--~-----~ 170 (279)
+..++||+||||+|..+.++++..+ .+++.+|+ +.+++.|++. . +|++++.+|.++ . .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 3568999999999999999998765 78999999 9999888741 1 279999999876 1 1
Q ss_pred Cccceeeehhhh-c-cCChh--HHHHHHHHH----HHhCCCCCCCcEEEEE
Q 023625 171 PQANAVLLKWIL-H-NWNDE--ESVKLLKKC----KEAIPSKDEGGKVIII 213 (279)
Q Consensus 171 ~~~D~v~~~~vl-h-~~~~~--~~~~~L~~~----~~~L~~~~pgG~lli~ 213 (279)
..||+|++--.- . ...+. ....+++.+ .++|+ |||.+++.
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~---pgGilv~q 313 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLK---QDGKYFTQ 313 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEE---EEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCC---CCcEEEEE
Confidence 359999985321 1 00110 123455555 89999 68877654
No 255
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.50 E-value=3.3e-07 Score=75.35 Aligned_cols=91 Identities=18% Similarity=0.269 Sum_probs=64.7
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-CCCeEEeeCCCCC-CCCc-c-ce
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-NDNLDFLGGNMFE-AIPQ-A-NA 175 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~ri~~~~~d~~~-~~~~-~-D~ 175 (279)
..+++..+ ..+..+|||||||+|.++..++++ +..+++++|+ +.+++.+++. ..+++++.+|+.+ +.+. + +.
T Consensus 21 ~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~ 97 (249)
T 3ftd_A 21 KKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKEL 97 (249)
T ss_dssp HHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSE
T ss_pred HHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCc
Confidence 44555554 456789999999999999999987 4578999999 8888887753 3589999999987 5543 1 34
Q ss_pred eeehhhhccCChhHHHHHH
Q 023625 176 VLLKWILHNWNDEESVKLL 194 (279)
Q Consensus 176 v~~~~vlh~~~~~~~~~~L 194 (279)
+++.+.-++.+.+-..++|
T Consensus 98 ~vv~NlPy~i~~~il~~ll 116 (249)
T 3ftd_A 98 KVVGNLPYNVASLIIENTV 116 (249)
T ss_dssp EEEEECCTTTHHHHHHHHH
T ss_pred EEEEECchhccHHHHHHHH
Confidence 5555555555444333333
No 256
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.49 E-value=1.7e-07 Score=79.14 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=61.6
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCC-C--C--
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFE-A--I-- 170 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~-~--~-- 170 (279)
..+++.+. ..+..+|||+|||+|.++..+++++|+.+++++|. +.+++.|++ ..++++++.+|+.+ + .
T Consensus 16 ~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 16 REVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 44555554 45678999999999999999999999889999999 899988874 22689999999865 2 1
Q ss_pred ---Cccceeeeh
Q 023625 171 ---PQANAVLLK 179 (279)
Q Consensus 171 ---~~~D~v~~~ 179 (279)
..+|.|++.
T Consensus 94 ~g~~~~D~Vl~D 105 (301)
T 1m6y_A 94 LGIEKVDGILMD 105 (301)
T ss_dssp TTCSCEEEEEEE
T ss_pred cCCCCCCEEEEc
Confidence 358988863
No 257
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.49 E-value=9.3e-07 Score=76.75 Aligned_cols=150 Identities=15% Similarity=0.179 Sum_probs=91.2
Q ss_pred CCEEEEecCCccHHHHHHHHH-----------------CCCCeEEEeeCh-----------hH-Hhhccc-C--CCCeE-
Q 023625 114 LKSLVDVAGGTGIMARAIATA-----------------FPDIKCTVFDLP-----------HV-VDNLQG-T--NDNLD- 160 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~-----------~~-~~~a~~-~--~~ri~- 160 (279)
.-+|+|+||++|..+..+... .|..+++.-|+| +. .+..++ . ..+-.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999999988776 477889999987 11 111111 1 11223
Q ss_pred --EeeCCCCC-CCC--ccceeeehhhhccCChhH-------------------------H------------HHHHHHHH
Q 023625 161 --FLGGNMFE-AIP--QANAVLLKWILHNWNDEE-------------------------S------------VKLLKKCK 198 (279)
Q Consensus 161 --~~~~d~~~-~~~--~~D~v~~~~vlh~~~~~~-------------------------~------------~~~L~~~~ 198 (279)
-++|.|+. .+| .+|+++++.+||-+++.. + ..+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567776 455 599999999999544321 2 22388889
Q ss_pred HhCCCCCCCcEEEEEeeecCCC--CCCchhhhhhhhcchhhh--------hhc--CCeeCCHHHHHHHHHHCC-CceeEE
Q 023625 199 EAIPSKDEGGKVIIIDMAIENQ--SQDKESMETQLCFDILMV--------SLF--RGKERSVDDWKKLFLAAG-FSHYKI 265 (279)
Q Consensus 199 ~~L~~~~pgG~lli~e~~~~~~--~~~~~~~~~~~~~d~~~~--------~~~--~~~~r~~~e~~~ll~~aG-f~~~~~ 265 (279)
+.|+ |||++++.-...++. ...........+.++... ..+ .-..++.+|++.+++++| |++..+
T Consensus 213 ~eL~---pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 213 EELI---SRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHEE---EEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHhc---cCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 9999 799998876655443 111000011112221100 001 122358999999999985 777765
Q ss_pred E
Q 023625 266 T 266 (279)
Q Consensus 266 ~ 266 (279)
.
T Consensus 290 e 290 (384)
T 2efj_A 290 E 290 (384)
T ss_dssp E
T ss_pred E
Confidence 4
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.46 E-value=4.1e-07 Score=79.61 Aligned_cols=112 Identities=14% Similarity=0.130 Sum_probs=80.0
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCC--------------------------------------CeEEE
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPD--------------------------------------IKCTV 142 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~~ 142 (279)
..++.... +.+..+|||.+||+|.++++.+....+ .++++
T Consensus 185 a~ll~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 185 AGLIYLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 33444443 456789999999999999998876422 57999
Q ss_pred eeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC-ccceeeehhhhcc-CC-hhHHHHHHHHHHHhCCCCCCCcEEE
Q 023625 143 FDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP-QANAVLLKWILHN-WN-DEESVKLLKKCKEAIPSKDEGGKVI 211 (279)
Q Consensus 143 ~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~-~~-~~~~~~~L~~~~~~L~~~~pgG~ll 211 (279)
+|+ +.+++.|+. ..++++|..+|+.+ +.+ .+|+|++.=.... +. .++...+.+.+.+.|++. +|+.++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~-~g~~~~ 341 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL-KNWSYY 341 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS-BSCEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC-CCCEEE
Confidence 999 999988874 33589999999987 444 5999998543321 22 345667777777777632 488888
Q ss_pred EEee
Q 023625 212 IIDM 215 (279)
Q Consensus 212 i~e~ 215 (279)
++..
T Consensus 342 iit~ 345 (385)
T 3ldu_A 342 LITS 345 (385)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8653
No 259
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.45 E-value=5.7e-07 Score=74.75 Aligned_cols=90 Identities=14% Similarity=0.115 Sum_probs=66.3
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC--CCCeEEeeCCCCC-CCC---cc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT--NDNLDFLGGNMFE-AIP---QA 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--~~ri~~~~~d~~~-~~~---~~ 173 (279)
..+++... ..+. +|||||||+|.++..++++. .+++++|+ +.+++.+++. ..+++++.+|+.+ +.+ .+
T Consensus 37 ~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~ 111 (271)
T 3fut_A 37 RRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQG 111 (271)
T ss_dssp HHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTT
T ss_pred HHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCc
Confidence 34555444 4556 99999999999999999985 68999999 8888887642 3689999999987 544 46
Q ss_pred ceeeehhhhccCChhHHHHHHHH
Q 023625 174 NAVLLKWILHNWNDEESVKLLKK 196 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L~~ 196 (279)
|.|+. +.-++++.+-..++|..
T Consensus 112 ~~iv~-NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 112 SLLVA-NLPYHIATPLVTRLLKT 133 (271)
T ss_dssp EEEEE-EECSSCCHHHHHHHHHH
T ss_pred cEEEe-cCcccccHHHHHHHhcC
Confidence 66554 44556677665666654
No 260
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.45 E-value=9.5e-07 Score=65.30 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=61.4
Q ss_pred hCCCCEEEEecCCcc-HHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCC----ccceeeehhhhcc
Q 023625 111 FEGLKSLVDVAGGTG-IMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIP----QANAVLLKWILHN 184 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G-~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~----~~D~v~~~~vlh~ 184 (279)
..+..+|||||||+| ..+..|+++ .+..+++.|+ |..++ ++..|+|+|.. +||+|+..+
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~----------~v~dDiF~P~~~~Y~~~DLIYsir---- 97 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG----------IVRDDITSPRMEIYRGAALIYSIR---- 97 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT----------EECCCSSSCCHHHHTTEEEEEEES----
T ss_pred CCCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc----------eEEccCCCCcccccCCcCEEEEcC----
Confidence 345679999999999 588888874 3678999998 65544 88999999754 699998765
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
++.+...-+.++++... ..++|.-
T Consensus 98 -PP~El~~~i~~lA~~v~-----adliI~p 121 (153)
T 2k4m_A 98 -PPAEIHSSLMRVADAVG-----ARLIIKP 121 (153)
T ss_dssp -CCTTTHHHHHHHHHHHT-----CEEEEEC
T ss_pred -CCHHHHHHHHHHHHHcC-----CCEEEEc
Confidence 45556666777777655 5555543
No 261
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.42 E-value=2.9e-07 Score=84.71 Aligned_cols=127 Identities=14% Similarity=0.153 Sum_probs=84.9
Q ss_pred hhhhhhcCchHHHHHHHHhhhcchhhHHHHHHhchhh--hCCCCEEEEecCCccHHHHHHHHHC----CCCeEEEeeChh
Q 023625 74 VWDRVADEPKFKSLFYDLMITDSELIAGIVIKDCKEV--FEGLKSLVDVAGGTGIMARAIATAF----PDIKCTVFDLPH 147 (279)
Q Consensus 74 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~~~ 147 (279)
.|+.+++|+-+-..|.+|+... +.+..... ......|+|||||+|-++...+++. -.+++.+++..+
T Consensus 323 tYevFEkD~vKy~~Ye~AI~~A-------l~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp 395 (637)
T 4gqb_A 323 TYEVFEKDPIKYSQYQQAIYKC-------LLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP 395 (637)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH-------HHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH
T ss_pred hhhhhcCChhhHHHHHHHHHHH-------HHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH
Confidence 4788888988888888776532 22211110 1234579999999999854444432 234788999855
Q ss_pred HHhhccc------CCCCeEEeeCCCCC-CCC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEE
Q 023625 148 VVDNLQG------TNDNLDFLGGNMFE-AIP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKV 210 (279)
Q Consensus 148 ~~~~a~~------~~~ri~~~~~d~~~-~~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~l 210 (279)
+...+++ ..++|+++.+|+.+ ..| .+|+|++-..=...--+-...+|....+.|+ |||.+
T Consensus 396 ~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LK---PgGim 463 (637)
T 4gqb_A 396 NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLK---DDGVS 463 (637)
T ss_dssp HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEE---EEEEE
T ss_pred HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcC---CCcEE
Confidence 6555553 47899999999998 667 5999987543333333445567777888899 68864
No 262
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.42 E-value=2.6e-07 Score=82.52 Aligned_cols=101 Identities=16% Similarity=0.127 Sum_probs=75.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHC-------------CCCeEEEeeC-hhHHhhccc------CC-CCeEEeeCCCCC-C
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAF-------------PDIKCTVFDL-PHVVDNLQG------TN-DNLDFLGGNMFE-A 169 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~------~~-~ri~~~~~d~~~-~ 169 (279)
....+|+|.|||+|.++..+++.. +..+++++|+ +.+++.|+. .. .++.+..+|.+. +
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 345799999999999999988763 4567999999 888887763 21 168899999987 3
Q ss_pred CC-ccceeeehhhhccCChh---------------HHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 170 IP-QANAVLLKWILHNWNDE---------------ESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 170 ~~-~~D~v~~~~vlh~~~~~---------------~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.. .||+|++.-.++..... .-..+++++.+.|+ |||++.++-+
T Consensus 250 ~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk---~gG~~a~V~p 308 (445)
T 2okc_A 250 PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLK---TGGRAAVVLP 308 (445)
T ss_dssp CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEE---EEEEEEEEEE
T ss_pred ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhc---cCCEEEEEEC
Confidence 33 69999987555432211 12478999999999 7999887653
No 263
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.39 E-value=1.5e-07 Score=78.71 Aligned_cols=68 Identities=12% Similarity=0.293 Sum_probs=54.0
Q ss_pred HHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCC--CeEEEeeC-hhHHhhcccC-CCCeEEeeCCCCC-CCC
Q 023625 102 IVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPD--IKCTVFDL-PHVVDNLQGT-NDNLDFLGGNMFE-AIP 171 (279)
Q Consensus 102 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~-~~ri~~~~~d~~~-~~~ 171 (279)
.+++... ..+..+|||||||+|.++..++++.+. .+++++|+ +.+++.+++. .++++++.+|+.+ +++
T Consensus 33 ~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 33 AIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFG 105 (279)
T ss_dssp HHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGG
T ss_pred HHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChh
Confidence 3454443 456789999999999999999998654 56999999 8888887753 3689999999987 544
No 264
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.38 E-value=1.2e-06 Score=77.48 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=66.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-----CCCeEEeeCCCCCCCC-ccceeeehhhhc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-----NDNLDFLGGNMFEAIP-QANAVLLKWILH 183 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~ri~~~~~d~~~~~~-~~D~v~~~~vlh 183 (279)
..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|+.. .. ++|+.+|+.+..+ .||+|++.-.-.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRA 364 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTT
T ss_pred cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCcc
Confidence 356789999999999999999986 458999999 8888888741 13 9999999987433 699999843211
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
... ..+++.+. .++ |+|.+++.
T Consensus 365 g~~----~~~~~~l~-~l~---p~givyvs 386 (425)
T 2jjq_A 365 GLH----PRLVKRLN-REK---PGVIVYVS 386 (425)
T ss_dssp CSC----HHHHHHHH-HHC---CSEEEEEE
T ss_pred chH----HHHHHHHH-hcC---CCcEEEEE
Confidence 111 13455444 378 68877764
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.36 E-value=5e-07 Score=74.49 Aligned_cols=66 Identities=14% Similarity=0.269 Sum_probs=52.9
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-CC
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-AI 170 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~~ 170 (279)
..+++... ..+..+|||||||+|.++..++++. .+++++|+ +.+++.+++. .++++++.+|+.+ +.
T Consensus 19 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 19 QKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCG
T ss_pred HHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCH
Confidence 34555444 4567899999999999999999874 68999999 8888887642 3689999999987 44
No 266
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.36 E-value=4.7e-06 Score=71.33 Aligned_cols=144 Identities=13% Similarity=0.100 Sum_probs=104.3
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhccc----C----------------------CCCeEEeeCC
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQG----T----------------------NDNLDFLGGN 165 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~----~----------------------~~ri~~~~~d 165 (279)
.+...||.+|||.......+...+++++++-+|.|.+++.-++ . .++..+++.|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4578999999999999999999888999999999988865431 1 3789999999
Q ss_pred CCC-CC----------C-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhc
Q 023625 166 MFE-AI----------P-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF 233 (279)
Q Consensus 166 ~~~-~~----------~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~ 233 (279)
+.+ +. + ...++++-.+|+.++++++.++|+.+.+..+ +|.+++.|.+.+..... +... ....
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~----~~~~v~~e~i~~~~~~~-~fg~-~m~~ 249 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFS----HGLWISYDPIGGSQPND-RFGA-IMQS 249 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS----SEEEEEEEECCCCSTTC-CHHH-HHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCC----CcEEEEEeccCCCCCcc-hHHH-HHHH
Confidence 987 22 1 2568888899999999999999999999875 78888899887632211 1111 0000
Q ss_pred chhh-h-h--hcCCeeCCHHHHHHHHHHCCCc
Q 023625 234 DILM-V-S--LFRGKERSVDDWKKLFLAAGFS 261 (279)
Q Consensus 234 d~~~-~-~--~~~~~~r~~~e~~~ll~~aGf~ 261 (279)
.+.- . . .......++++..+.|.++||+
T Consensus 250 ~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 250 NLKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred HhhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 1100 0 0 0011234889999999999997
No 267
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.35 E-value=8.1e-07 Score=74.23 Aligned_cols=99 Identities=13% Similarity=0.224 Sum_probs=75.5
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----------CCCCeEEeeCCCCCCC----Ccccee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----------TNDNLDFLGGNMFEAI----PQANAV 176 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~ri~~~~~d~~~~~----~~~D~v 176 (279)
+..++||-||+|.|..+.++++..|..+++++|+ +.+++.+++ ..+|++++.+|..+-+ ..||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4678999999999999999999877789999999 999988763 2579999999988732 259999
Q ss_pred eehhhhccCChh---HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 177 LLKWILHNWNDE---ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 177 ~~~~vlh~~~~~---~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
++-.. ....+. -...+++.++++|+ |||.++...
T Consensus 162 i~D~~-dp~~~~~~L~t~eFy~~~~~~L~---p~Gv~v~q~ 198 (294)
T 3o4f_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLN---PGGIFVAQN 198 (294)
T ss_dssp EESCC-CCCCTTCCSSCCHHHHHHHHTEE---EEEEEEEEE
T ss_pred EEeCC-CcCCCchhhcCHHHHHHHHHHhC---CCCEEEEec
Confidence 87321 111111 12367999999999 788777643
No 268
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.34 E-value=5.8e-06 Score=71.15 Aligned_cols=150 Identities=14% Similarity=0.195 Sum_probs=91.3
Q ss_pred CCCEEEEecCCccHHHHHHHHH----------------CCCCeEEEeeCh-hHHhhc-ccCC-----CC---eEEeeCCC
Q 023625 113 GLKSLVDVAGGTGIMARAIATA----------------FPDIKCTVFDLP-HVVDNL-QGTN-----DN---LDFLGGNM 166 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~----------------~p~~~~~~~D~~-~~~~~a-~~~~-----~r---i~~~~~d~ 166 (279)
..-+|+|+||++|..+..+... .|..+++.-|+| ...... +.+. .+ +.-++|.|
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3467999999999877655443 467888999984 223222 1111 12 23466778
Q ss_pred CC-CCC--ccceeeehhhhccCCh-------------------------------hHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 167 FE-AIP--QANAVLLKWILHNWND-------------------------------EESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 167 ~~-~~~--~~D~v~~~~vlh~~~~-------------------------------~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
+. .+| .+|+++++.+||-+++ .|...+|+..++.|+ |||++++
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~---pGG~mvl 207 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV---PGGRMVL 207 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC---TTCEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCceEEE
Confidence 77 456 5999999999995443 134456999999999 7999988
Q ss_pred EeeecCCCCCCch-----h-hhhhhhcchhhhh--------hc--CCeeCCHHHHHHHHHHCCC-ceeEE
Q 023625 213 IDMAIENQSQDKE-----S-METQLCFDILMVS--------LF--RGKERSVDDWKKLFLAAGF-SHYKI 265 (279)
Q Consensus 213 ~e~~~~~~~~~~~-----~-~~~~~~~d~~~~~--------~~--~~~~r~~~e~~~ll~~aGf-~~~~~ 265 (279)
.-...++...... + .....+.++...- .+ .-..++.+|++.++++.|. ++..+
T Consensus 208 ~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 208 TILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp EEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred EEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 7766554321000 0 0011111111000 00 1234588999999999965 66554
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.30 E-value=1.4e-06 Score=81.89 Aligned_cols=99 Identities=11% Similarity=0.150 Sum_probs=74.2
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------CC-CCeEEeeCCCCCC---C-Cccceeeeh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------TN-DNLDFLGGNMFEA---I-PQANAVLLK 179 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~-~ri~~~~~d~~~~---~-~~~D~v~~~ 179 (279)
.++.+|||+|||+|.++..+++... .+++++|+ +.+++.+++ .. ++++++.+|.++. . ..||+|++.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 4578999999999999999988532 46999999 888888774 22 5899999999862 2 359999984
Q ss_pred hhhc--------cC-ChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 180 WILH--------NW-NDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 180 ~vlh--------~~-~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
-.-. .+ ...+..++++++.+.|+ |||.+++..
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lk---pgG~L~~s~ 657 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR---AGGTIMFSN 657 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEE---EEEEEEEEE
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcC---CCcEEEEEE
Confidence 3211 01 12345688999999999 799888544
No 270
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.26 E-value=2.5e-06 Score=69.98 Aligned_cols=99 Identities=11% Similarity=0.048 Sum_probs=62.4
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHh-hcccC---CCCeEEeeCCCCC-CCC--ccceeeehhhhc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVD-NLQGT---NDNLDFLGGNMFE-AIP--QANAVLLKWILH 183 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~-~a~~~---~~ri~~~~~d~~~-~~~--~~D~v~~~~vlh 183 (279)
+.+..+|||+|||+|.++..++++.+-.+++++|+..-+. ..... ..++.....++.. .++ .+|+|++....+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apn 151 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGES 151 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccC
Confidence 5677899999999999999888876655677777631111 11111 1133334444321 232 599999866544
Q ss_pred ---cCChh-HHHHHHHHHHHhCCCCCCC-cEEEE
Q 023625 184 ---NWNDE-ESVKLLKKCKEAIPSKDEG-GKVII 212 (279)
Q Consensus 184 ---~~~~~-~~~~~L~~~~~~L~~~~pg-G~lli 212 (279)
.+.|+ ....+|+.+.+.|+ || |.+++
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~Lk---pG~G~FV~ 182 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLA---CGVDNFCV 182 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHT---TCCSEEEE
T ss_pred cCchHHHHHHHHHHHHHHHHHhC---CCCCeEEE
Confidence 12232 33457899999999 78 87776
No 271
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.25 E-value=1.2e-06 Score=72.10 Aligned_cols=90 Identities=12% Similarity=0.122 Sum_probs=60.3
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-CCCc-c-
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-AIPQ-A- 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~~~~-~- 173 (279)
..+++... ..+..+|||||||+|.++. +. +.+..+++++|+ +.+++.+++. .++++++.+|+.+ +.+. +
T Consensus 11 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~ 86 (252)
T 1qyr_A 11 DSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE 86 (252)
T ss_dssp HHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHH
T ss_pred HHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhc
Confidence 34555443 4567899999999999999 54 454444999999 8999888763 1489999999987 5432 2
Q ss_pred ----ceeeehhhhccCChhHHHHHH
Q 023625 174 ----NAVLLKWILHNWNDEESVKLL 194 (279)
Q Consensus 174 ----D~v~~~~vlh~~~~~~~~~~L 194 (279)
+.++.++.-++.+.+-..++|
T Consensus 87 ~~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 87 KMGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp HHTSCEEEEEECCTTTHHHHHHHHH
T ss_pred ccCCceEEEECCCCCccHHHHHHHH
Confidence 244444544444444333443
No 272
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.24 E-value=1.9e-06 Score=79.50 Aligned_cols=127 Identities=11% Similarity=0.099 Sum_probs=82.5
Q ss_pred hhhhhhcCchHHHHHHHHhhhcchhhHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHH----C---------CCCeE
Q 023625 74 VWDRVADEPKFKSLFYDLMITDSELIAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATA----F---------PDIKC 140 (279)
Q Consensus 74 ~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~----~---------p~~~~ 140 (279)
.|+.+.+|+-+-..|.+|+... +.+..+ .-.+...|+|||||+|-++...+++ . ...++
T Consensus 378 tYe~fekD~vRy~~Y~~AI~~a-------l~d~~~-~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kV 449 (745)
T 3ua3_A 378 VYNTFEQDQIKYDVYGEAVVGA-------LKDLGA-DGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKL 449 (745)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHH-------HHHHHT-TCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEE
T ss_pred HHHHHcCChhhHHHHHHHHHHH-------HHHhhc-ccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEE
Confidence 4777788887777777776542 111111 0123468999999999997533222 1 23489
Q ss_pred EEeeC-hhHHhhcc-----cCCCCeEEeeCCCCC-CC------C-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCC
Q 023625 141 TVFDL-PHVVDNLQ-----GTNDNLDFLGGNMFE-AI------P-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDE 206 (279)
Q Consensus 141 ~~~D~-~~~~~~a~-----~~~~ri~~~~~d~~~-~~------~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~p 206 (279)
++++. +.++...+ ...++|+++.+|+.+ .. + .+|+|++-..=.....+-....|..+.+.|+ |
T Consensus 450 yAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lk---p 526 (745)
T 3ua3_A 450 YIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLK---P 526 (745)
T ss_dssp EEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSC---T
T ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCC---C
Confidence 99998 44443222 346899999999987 44 4 5999998665333333445567888889999 7
Q ss_pred CcEEE
Q 023625 207 GGKVI 211 (279)
Q Consensus 207 gG~ll 211 (279)
||.++
T Consensus 527 ~Gi~i 531 (745)
T 3ua3_A 527 TTISI 531 (745)
T ss_dssp TCEEE
T ss_pred CcEEE
Confidence 88643
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.20 E-value=3e-06 Score=69.93 Aligned_cols=99 Identities=16% Similarity=0.247 Sum_probs=68.5
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-h-------hHHhhcccC------CCCeEEeeCCCCC--C-C---
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-P-------HVVDNLQGT------NDNLDFLGGNMFE--A-I--- 170 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-------~~~~~a~~~------~~ri~~~~~d~~~--~-~--- 170 (279)
..+..+|||+|||+|..+..+++. ..+++++|+ + .+++.++.. ..|++++.+|..+ + .
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 345679999999999999999986 568999999 7 777777642 3579999999875 2 2
Q ss_pred -CccceeeehhhhccCC------------------hhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 171 -PQANAVLLKWILHNWN------------------DEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 171 -~~~D~v~~~~vlh~~~------------------~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
..||+|++.-.++.-. +.+...+++.+.++.+ .+++|-.+.
T Consensus 159 ~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~-----~~vvvk~p~ 218 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAK-----KRVVVKRPR 218 (258)
T ss_dssp HCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCS-----SEEEEEEET
T ss_pred CCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcC-----cEEEEEcCC
Confidence 3599999854333211 1234556667777665 456665543
No 274
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.18 E-value=1.9e-06 Score=71.05 Aligned_cols=128 Identities=18% Similarity=0.196 Sum_probs=80.2
Q ss_pred CCCEEEEecCCccHHHHHHHHH-------CCC-----CeEEEeeC-h---hHHh-----------hccc-----------
Q 023625 113 GLKSLVDVAGGTGIMARAIATA-------FPD-----IKCTVFDL-P---HVVD-----------NLQG----------- 154 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~-------~p~-----~~~~~~D~-~---~~~~-----------~a~~----------- 154 (279)
+..+|||||+|+|..+..+++. .|+ ++++.++. | +.+. .+++
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999999887765 674 58999987 5 2222 1111
Q ss_pred -----C---CCCeEEeeCCCCC--C-CC-----ccceeeehh-hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 155 -----T---NDNLDFLGGNMFE--A-IP-----QANAVLLKW-ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 155 -----~---~~ri~~~~~d~~~--~-~~-----~~D~v~~~~-vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
. ..++++..||..+ + .+ .||+|++-- .-...++--...+|+.+++.|+ |||.++...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~---pGG~l~tys--- 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLAR---PGGTLATFT--- 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEE---EEEEEEESC---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcC---CCcEEEEEe---
Confidence 1 1356788999765 2 22 489999832 1110011012468999999999 799876411
Q ss_pred CCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEE
Q 023625 218 ENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLI 275 (279)
Q Consensus 218 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i 275 (279)
. ...+++.|.++||++.++...+.-..++
T Consensus 214 -a----------------------------a~~vrr~L~~aGF~v~~~~g~~~kr~m~ 242 (257)
T 2qy6_A 214 -S----------------------------AGFVRRGLQEAGFTMQKRKGFGRKREML 242 (257)
T ss_dssp -C----------------------------BHHHHHHHHHHTEEEEEECCSTTCCCEE
T ss_pred -C----------------------------CHHHHHHHHHCCCEEEeCCCCCCCCceE
Confidence 0 1246788899999977654444333333
No 275
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.11 E-value=1.6e-05 Score=67.31 Aligned_cols=68 Identities=13% Similarity=0.179 Sum_probs=54.4
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhccc----C-CCCeEEeeCCCCC-CC-----Cccceee
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQG----T-NDNLDFLGGNMFE-AI-----PQANAVL 177 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~----~-~~ri~~~~~d~~~-~~-----~~~D~v~ 177 (279)
..++.+|||+|||+|..+..+++.. +..+++++|+ +..++.+++ . ..+++++.+|+.+ +. ..||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 4567899999999999999999975 5679999999 888877663 1 2579999999865 21 2589998
Q ss_pred e
Q 023625 178 L 178 (279)
Q Consensus 178 ~ 178 (279)
+
T Consensus 180 ~ 180 (309)
T 2b9e_A 180 L 180 (309)
T ss_dssp E
T ss_pred E
Confidence 6
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.11 E-value=5.4e-06 Score=77.98 Aligned_cols=113 Identities=12% Similarity=0.094 Sum_probs=75.0
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHC------------------------------------------CCC
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAF------------------------------------------PDI 138 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~------------------------------------------p~~ 138 (279)
..++.... +.+...|+|.+||+|.++++.+... +..
T Consensus 180 a~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 180 AAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 33444433 4567899999999999999888652 346
Q ss_pred eEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-CCC----ccceeeehhhhcc-C-ChhHHHHHHHHHHHhCCCC
Q 023625 139 KCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-AIP----QANAVLLKWILHN-W-NDEESVKLLKKCKEAIPSK 204 (279)
Q Consensus 139 ~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~~~----~~D~v~~~~vlh~-~-~~~~~~~~L~~~~~~L~~~ 204 (279)
+++++|+ +.+++.|+. ..++++|..+|+.+ ..| .+|+|++.=.... + .+++...+.+.+.+.++..
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 8999999 999988874 34579999999976 222 5899998522211 1 2234445555444444311
Q ss_pred CCCcEEEEEee
Q 023625 205 DEGGKVIIIDM 215 (279)
Q Consensus 205 ~pgG~lli~e~ 215 (279)
-|||+++|+..
T Consensus 338 ~~g~~~~ilt~ 348 (703)
T 3v97_A 338 FGGWNLSLFSA 348 (703)
T ss_dssp CTTCEEEEEES
T ss_pred CCCCeEEEEeC
Confidence 16999988754
No 277
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.09 E-value=2.8e-06 Score=69.81 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=67.7
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc---CCCC-eEEeeC-CCCC-CCCcc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG---TNDN-LDFLGG-NMFE-AIPQA 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~r-i~~~~~-d~~~-~~~~~ 173 (279)
.++.+.+. +.+..+|||+|||+|.++...+++.+-..++++|+ ......+.. ...+ +.+... |+.. +...+
T Consensus 80 ~ei~eK~~--Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~ 157 (282)
T 3gcz_A 80 RWMEERGY--VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPG 157 (282)
T ss_dssp HHHHHTTS--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCC
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCc
Confidence 44555553 67788999999999999999888777667888888 332222221 1112 334433 4433 22359
Q ss_pred ceeeehhhhc----cCChhHHHHHHHHHHHhCCCCCCC--cEEEE
Q 023625 174 NAVLLKWILH----NWNDEESVKLLKKCKEAIPSKDEG--GKVII 212 (279)
Q Consensus 174 D~v~~~~vlh----~~~~~~~~~~L~~~~~~L~~~~pg--G~lli 212 (279)
|+|++-...+ .........+|+-+.+.|+ || |.+++
T Consensus 158 DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk---~g~~G~Fv~ 199 (282)
T 3gcz_A 158 DTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQ---EGNYTEFCI 199 (282)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHH---HHCCCEEEE
T ss_pred CEEEecCccCCCChHHHHHHHHHHHHHHHHHcC---CCCCCcEEE
Confidence 9999866554 1112233457888889999 67 87665
No 278
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.03 E-value=2.7e-06 Score=74.15 Aligned_cols=93 Identities=12% Similarity=0.104 Sum_probs=70.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----C---------------C-CCeEEeeCCCCCC--
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----T---------------N-DNLDFLGGNMFEA-- 169 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~---------------~-~ri~~~~~d~~~~-- 169 (279)
+..+|||+|||+|..++.++++.+..++++.|+ +..++.+++ . . .+++++.+|..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 467999999999999999999988889999999 888877663 1 1 2388999998652
Q ss_pred -CC-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 170 -IP-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 170 -~~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.+ .||+|++. .. -....+|..+.+.++ |||.+++.-
T Consensus 127 ~~~~~fD~I~lD-P~-----~~~~~~l~~a~~~lk---~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLD-PF-----GSPMEFLDTALRSAK---RRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEEC-CS-----SCCHHHHHHHHHHEE---EEEEEEEEE
T ss_pred hccCCCCEEEeC-CC-----CCHHHHHHHHHHhcC---CCCEEEEEe
Confidence 22 59999852 21 112478899999999 688766643
No 279
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.01 E-value=2.2e-06 Score=74.65 Aligned_cols=88 Identities=16% Similarity=0.186 Sum_probs=63.0
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc----C-CCCeEEeeCCCCCC---C--------------
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG----T-NDNLDFLGGNMFEA---I-------------- 170 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~-~~ri~~~~~d~~~~---~-------------- 170 (279)
..+|||+|||+|.++..+++.. .+++++|. +.+++.|+. . -++++|+.+|..+- .
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 4789999999999999998753 48999999 888888764 1 25899999998651 1
Q ss_pred --CccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 171 --PQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 171 --~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
..||+|++.- |.. .+..++.+.|+ ++|+++++.
T Consensus 292 ~~~~fD~Vv~dP-----Pr~---g~~~~~~~~l~---~~g~ivyvs 326 (369)
T 3bt7_A 292 KSYQCETIFVDP-----PRS---GLDSETEKMVQ---AYPRILYIS 326 (369)
T ss_dssp GGCCEEEEEECC-----CTT---CCCHHHHHHHT---TSSEEEEEE
T ss_pred ccCCCCEEEECc-----Ccc---ccHHHHHHHHh---CCCEEEEEE
Confidence 1589998631 111 23344555666 578887765
No 280
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.95 E-value=0.00039 Score=59.28 Aligned_cols=147 Identities=14% Similarity=0.179 Sum_probs=102.4
Q ss_pred CCCEEEEecCCccHHHHHHHHH-CCCCeEEEeeChhHHhhccc----------------------------CCCCeEEee
Q 023625 113 GLKSLVDVAGGTGIMARAIATA-FPDIKCTVFDLPHVVDNLQG----------------------------TNDNLDFLG 163 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~-~p~~~~~~~D~~~~~~~a~~----------------------------~~~ri~~~~ 163 (279)
+...||-+|||.=.....+... .++++++-+|.|++++.=+. ..++..+++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 5689999999999999998875 36789999999988764210 147889999
Q ss_pred CCCCCC--C----------C-ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhh
Q 023625 164 GNMFEA--I----------P-QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQ 230 (279)
Q Consensus 164 ~d~~~~--~----------~-~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~ 230 (279)
.|+.+. + + ..-++++-.+|..++++++.++|+.+.+..+ +|.+++.|.+.++. ++.. .
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~----~~~~i~yE~i~p~d----~fg~-~ 240 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE----RAMFINYEQVNMGD----RFGQ-I 240 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS----SEEEEEEEECCTTS----HHHH-H
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC----CceEEEEeccCCCC----HHHH-H
Confidence 999761 1 1 1346777789999999999999999999887 57778888885432 1110 0
Q ss_pred hhcchhhhhh-cCC--eeCCHHHHHHHHHHCCCceeEEEec
Q 023625 231 LCFDILMVSL-FRG--KERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 231 ~~~d~~~~~~-~~~--~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
....+.-.-. ..+ ...+.++..+.|.++||+.++..++
T Consensus 241 M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 241 MIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 0000100000 001 2237788899999999998877654
No 281
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.90 E-value=8.6e-05 Score=63.75 Aligned_cols=95 Identities=9% Similarity=0.045 Sum_probs=69.6
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhcccCCCCeEEeeCCCCCC-CC--ccceeeehhhhccCCh
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQGTNDNLDFLGGNMFEA-IP--QANAVLLKWILHNWND 187 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~~-~~--~~D~v~~~~vlh~~~~ 187 (279)
+.++.++||+||++|.++..++++ +.+++++|..++-...... ++|+++.+|.+.. .+ .+|+|++-.+. ++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~-~~V~~~~~d~~~~~~~~~~~D~vvsDm~~---~p 282 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDT-GQVTWLREDGFKFRPTRSNISWMVCDMVE---KP 282 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTT-TCEEEECSCTTTCCCCSSCEEEEEECCSS---CH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccC-CCeEEEeCccccccCCCCCcCEEEEcCCC---Ch
Confidence 567899999999999999999987 6799999985544444444 7999999999883 22 49999986654 45
Q ss_pred hHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 188 EESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 188 ~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.....++.+...... .++.|+.+.
T Consensus 283 ~~~~~l~~~wl~~~~---~~~aI~~lK 306 (375)
T 4auk_A 283 AKVAALMAQWLVNGW---CRETIFNLK 306 (375)
T ss_dssp HHHHHHHHHHHHTTS---CSEEEEEEE
T ss_pred HHhHHHHHHHHhccc---cceEEEEEE
Confidence 556666666655554 345554444
No 282
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.89 E-value=5.3e-06 Score=72.43 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=70.7
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCC-CeEEEeeC-hhHHhhccc------CCCC-eEEeeCCCCC--C--CC-ccceee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPD-IKCTVFDL-PHVVDNLQG------TNDN-LDFLGGNMFE--A--IP-QANAVL 177 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~r-i~~~~~d~~~--~--~~-~~D~v~ 177 (279)
.++.+|||++||+|.+++.++++.++ .+++.+|+ +..++.+++ ..++ ++++.+|..+ . .+ .||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 35689999999999999999998765 57999999 888887764 3345 9999999865 2 22 599998
Q ss_pred ehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 178 LKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 178 ~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+-= . . ....++..+.+.|+ |||.|++.-
T Consensus 131 lDP--~--g--~~~~~l~~a~~~Lk---~gGll~~t~ 158 (392)
T 3axs_A 131 LDP--F--G--TPVPFIESVALSMK---RGGILSLTA 158 (392)
T ss_dssp ECC--S--S--CCHHHHHHHHHHEE---EEEEEEEEE
T ss_pred ECC--C--c--CHHHHHHHHHHHhC---CCCEEEEEe
Confidence 743 1 1 11357888999999 688666544
No 283
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.88 E-value=1.7e-05 Score=72.45 Aligned_cols=100 Identities=14% Similarity=0.122 Sum_probs=72.1
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCC------------------CCeEEEeeC-hhHHhhccc-----CCC-----CeEEe
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFP------------------DIKCTVFDL-PHVVDNLQG-----TND-----NLDFL 162 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p------------------~~~~~~~D~-~~~~~~a~~-----~~~-----ri~~~ 162 (279)
.+..+|+|.+||+|.++..+.+... ..+++++|+ +.+++.|+. ... ++.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 3467999999999999998877532 247999999 888887763 112 27889
Q ss_pred eCCCCC-C---CCccceeeehhhhccCC------------hhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 163 GGNMFE-A---IPQANAVLLKWILHNWN------------DEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 163 ~~d~~~-~---~~~~D~v~~~~vlh~~~------------~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.+|.+. + ...||+|++.=.+.... .+.-..++.++.+.|+ |||++.++-
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk---~gGr~a~V~ 312 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLH---PGGRAAVVV 312 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEE---EEEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhC---CCCEEEEEe
Confidence 999887 3 23699999854333211 1122478999999999 799988864
No 284
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.75 E-value=6.5e-05 Score=62.17 Aligned_cols=100 Identities=11% Similarity=0.086 Sum_probs=63.6
Q ss_pred hhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeCh-hHHhhcc---cCC-CCeEEeeC-CCCC-CCCccceeeehhhh
Q 023625 110 VFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLP-HVVDNLQ---GTN-DNLDFLGG-NMFE-AIPQANAVLLKWIL 182 (279)
Q Consensus 110 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~---~~~-~ri~~~~~-d~~~-~~~~~D~v~~~~vl 182 (279)
.+.+..+|||+||++|.++..++++.+-..++++|+. ....... ... +-+.+..+ |++. +...+|+|++-..-
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~AP 157 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGE 157 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcC
Confidence 3577889999999999999999987666678888873 2211111 111 22344433 5443 22359999985444
Q ss_pred c----cCChhHHHHHHHHHHHhCCCCCCC-cEEEE
Q 023625 183 H----NWNDEESVKLLKKCKEAIPSKDEG-GKVII 212 (279)
Q Consensus 183 h----~~~~~~~~~~L~~~~~~L~~~~pg-G~lli 212 (279)
+ .........+|.-+.+.|+ || |.+++
T Consensus 158 nsG~~~~D~~rs~~LL~~A~~~Lk---pG~G~FV~ 189 (300)
T 3eld_A 158 SSSNPLVERDRTMKVLENFERWKH---VNTENFCV 189 (300)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCC---TTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhc---CCCCcEEE
Confidence 3 1111123566888889999 78 87776
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.71 E-value=0.0002 Score=67.28 Aligned_cols=99 Identities=15% Similarity=0.195 Sum_probs=68.2
Q ss_pred CCCEEEEecCCccHHHHHHHHHCC---CCeEEEeeC-hhHHhhc--cc------C---CCCeEEeeCCCCCC----CCcc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFP---DIKCTVFDL-PHVVDNL--QG------T---NDNLDFLGGNMFEA----IPQA 173 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~-~~~~~~a--~~------~---~~ri~~~~~d~~~~----~~~~ 173 (279)
+..+|+|.|||+|.++.++++..+ ..+++++|+ +.+++.| +. . .+...+...|+..+ ...|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467999999999999999999876 357999999 7777777 21 1 12235666777662 2359
Q ss_pred ceeeehhhhcc-CCh-h-------------------------HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 174 NAVLLKWILHN-WND-E-------------------------ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 174 D~v~~~~vlh~-~~~-~-------------------------~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
|+|++.=..-. +.. . -...++.++.+.|+ |||++.++-
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLK---pGGrLAfIl 465 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQ---DGTVISAIM 465 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSC---TTCEEEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcC---CCcEEEEEE
Confidence 99988432210 111 1 12347888999999 799988754
No 286
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.65 E-value=0.00033 Score=55.23 Aligned_cols=92 Identities=11% Similarity=0.092 Sum_probs=62.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc------C--CCCeEEeeCCCCCC-------------
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG------T--NDNLDFLGGNMFEA------------- 169 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--~~ri~~~~~d~~~~------------- 169 (279)
.+.++|||+|+| .-+..+++ .++.+++.+|. ++..+.|++ . .++|+++.+|..+-
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred hCCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 456899999985 45555555 45789999998 777777763 3 56899999995421
Q ss_pred -----------C---CccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 170 -----------I---PQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 170 -----------~---~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
. ..||+|++-.-- ....+..+.+.|+ |||.| ++|.+.
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~---~GG~I-v~DNv~ 156 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSIT---RPVTL-LFDDYS 156 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCS---SCEEE-EETTGG
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcC---CCeEE-EEeCCc
Confidence 1 249999985421 1244555668899 68866 555543
No 287
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.63 E-value=5.6e-05 Score=65.15 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=70.2
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-------------CCCeEEeeCCCCCC-------CC
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-------------NDNLDFLGGNMFEA-------IP 171 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------------~~ri~~~~~d~~~~-------~~ 171 (279)
+.++||=||+|.|..+.++++. |..+++++|+ |.+++.+++. .+|++++.+|...- ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 4689999999999999999985 5578999999 8999887741 25789999997641 12
Q ss_pred ccceeeehhhhcc-------CCh-hHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 172 QANAVLLKWILHN-------WND-EESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 172 ~~D~v~~~~vlh~-------~~~-~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.||+|+.-..-.. ... .-...+++.++++|+ |||.++..
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~---p~GVlv~Q 330 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLK---QDGKYFTQ 330 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEE---EEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcC---CCCEEEEe
Confidence 5999997421100 001 113577899999999 68876653
No 288
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.62 E-value=7.8e-05 Score=65.29 Aligned_cols=65 Identities=15% Similarity=0.239 Sum_probs=53.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC-------CCCeEEeeCCCCCC--C---Cccceeee
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT-------NDNLDFLGGNMFEA--I---PQANAVLL 178 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~ri~~~~~d~~~~--~---~~~D~v~~ 178 (279)
.++.+|||+|||+|..+..+++. ..+++++|+ +.+++.|+.. .++++++.+|+.+. . ..||+|++
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 34689999999999999999887 468999999 8888877631 15799999999873 2 25999998
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.59 E-value=0.00016 Score=59.70 Aligned_cols=76 Identities=18% Similarity=0.198 Sum_probs=59.4
Q ss_pred hHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCC-CCeEEeeCCCCC-C--C---
Q 023625 99 IAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTN-DNLDFLGGNMFE-A--I--- 170 (279)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~ri~~~~~d~~~-~--~--- 170 (279)
..+.+++.+. ..+...+||.+||.|..+..++++ +.+++++|. |.+++.+++.. +|++++.+||.+ + .
T Consensus 10 Ll~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~ 85 (285)
T 1wg8_A 10 LYQEALDLLA--VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAAL 85 (285)
T ss_dssp THHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHT
T ss_pred HHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHc
Confidence 3456777665 567789999999999999999998 679999999 88888876532 589999999865 2 1
Q ss_pred --Cccceeee
Q 023625 171 --PQANAVLL 178 (279)
Q Consensus 171 --~~~D~v~~ 178 (279)
..+|.|++
T Consensus 86 g~~~vDgIL~ 95 (285)
T 1wg8_A 86 GVERVDGILA 95 (285)
T ss_dssp TCSCEEEEEE
T ss_pred CCCCcCEEEe
Confidence 24676665
No 290
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.51 E-value=7.8e-05 Score=61.30 Aligned_cols=72 Identities=18% Similarity=0.310 Sum_probs=52.8
Q ss_pred hCCC--CEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhH-------Hhhccc-------CCCCeEEeeCCCCC--C-C
Q 023625 111 FEGL--KSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHV-------VDNLQG-------TNDNLDFLGGNMFE--A-I 170 (279)
Q Consensus 111 ~~~~--~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~-------~~~a~~-------~~~ri~~~~~d~~~--~-~ 170 (279)
..+. .+|||++||+|..+..++++ +.+++++|. +.+ ++.++. ...|++++.+|..+ + .
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~ 161 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI 161 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC
Confidence 4455 79999999999999999998 568999999 644 333321 11579999999865 2 2
Q ss_pred C-ccceeeehhhhcc
Q 023625 171 P-QANAVLLKWILHN 184 (279)
Q Consensus 171 ~-~~D~v~~~~vlh~ 184 (279)
+ .||+|++.-..+.
T Consensus 162 ~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 162 TPRPQVVYLDPMFPH 176 (258)
T ss_dssp SSCCSEEEECCCCCC
T ss_pred cccCCEEEEcCCCCC
Confidence 3 5999998655543
No 291
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.47 E-value=0.00011 Score=67.07 Aligned_cols=98 Identities=14% Similarity=0.121 Sum_probs=68.3
Q ss_pred CCEEEEecCCccHHHHHHHHHCC---------------CCeEEEeeC-hhHHhhccc------CCCCeEEeeCCCCC-C-
Q 023625 114 LKSLVDVAGGTGIMARAIATAFP---------------DIKCTVFDL-PHVVDNLQG------TNDNLDFLGGNMFE-A- 169 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p---------------~~~~~~~D~-~~~~~~a~~------~~~ri~~~~~d~~~-~- 169 (279)
..+|+|.+||+|.++..+++..+ ..++.++|+ +.++..|+. ...++.+..+|.+. +
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~ 324 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ 324 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc
Confidence 34999999999999988765432 467999999 888887763 22345558899876 3
Q ss_pred CC--ccceeeehhhhc--cCChh-------------------------HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 170 IP--QANAVLLKWILH--NWNDE-------------------------ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 170 ~~--~~D~v~~~~vlh--~~~~~-------------------------~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.+ .||+|++.=.+. .|..+ .-..++.++.+.|+ |||++.++-
T Consensus 325 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk---~gGr~aiVl 395 (544)
T 3khk_A 325 HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLA---PTGSMALLL 395 (544)
T ss_dssp CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEE---EEEEEEEEE
T ss_pred cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhc---cCceEEEEe
Confidence 22 599999842222 12111 11358899999999 799987764
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.35 E-value=0.00041 Score=56.17 Aligned_cols=107 Identities=12% Similarity=0.117 Sum_probs=61.6
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhH--HhhcccCCCCe---EEeeC-CCCCCCC-cc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHV--VDNLQGTNDNL---DFLGG-NMFEAIP-QA 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~--~~~a~~~~~ri---~~~~~-d~~~~~~-~~ 173 (279)
.++.+.+ .+.+..+|||+||+.|.++...++.-+--.+.+.++... +.........+ .|+.+ |+++..+ .+
T Consensus 63 ~EIdeK~--likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~ 140 (269)
T 2px2_A 63 RWLVERR--FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKPSEIS 140 (269)
T ss_dssp HHHHHTT--SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSCCCCC
T ss_pred HHHHHcC--CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCCCCCC
Confidence 3455553 478899999999999999998888521112234443211 11111111344 55657 9987433 59
Q ss_pred ceeeehhhhc---cCChh-HHHHHHHHHHHhCCCCCCCc-EEEE
Q 023625 174 NAVLLKWILH---NWNDE-ESVKLLKKCKEAIPSKDEGG-KVII 212 (279)
Q Consensus 174 D~v~~~~vlh---~~~~~-~~~~~L~~~~~~L~~~~pgG-~lli 212 (279)
|+|++-..-. ...|. ....+|.-+.+.|+ ||| .+++
T Consensus 141 DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk---~gG~~Fvv 181 (269)
T 2px2_A 141 DTLLCDIGESSPSAEIEEQRTLRILEMVSDWLS---RGPKEFCI 181 (269)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT---TCCSEEEE
T ss_pred CEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhh---cCCcEEEE
Confidence 9999743221 01111 12235767778899 688 6655
No 293
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.34 E-value=5.7e-05 Score=80.11 Aligned_cols=143 Identities=15% Similarity=0.169 Sum_probs=67.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCC-----CeEEEeeC-hhHHhhcccC--CCCeEEeeCCCCCC---CC-ccceeeehh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPD-----IKCTVFDL-PHVVDNLQGT--NDNLDFLGGNMFEA---IP-QANAVLLKW 180 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~-----~~~~~~D~-~~~~~~a~~~--~~ri~~~~~d~~~~---~~-~~D~v~~~~ 180 (279)
+..+||+||+|+|..+..+++.... .+++..|+ +...+.+++. .-.++...-|..++ .+ +||+|+..+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 4569999999999887777766532 36888898 6666666642 11233322233332 22 599999999
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHCCC
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 260 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf 260 (279)
+||.-++ ....|+++++.|+ |||++++.+......-.. ...+.+-. ........+.++|.++|+++||
T Consensus 1320 vl~~t~~--~~~~l~~~~~lL~---p~G~l~~~e~~~~~~~g~-----~~~~~~~~--~r~~~~~~~~~~w~~~l~~~gf 1387 (2512)
T 2vz8_A 1320 ALATLGD--PAVAVGNMAATLK---EGGFLLLHTLLAGHPLGE-----MVGFLTSP--EQGGRHLLSQDQWESLFAGASL 1387 (2512)
T ss_dssp C-------------------------CCEEEEEEC---------------------------------CTTTTSSTTTTE
T ss_pred ccccccc--HHHHHHHHHHhcC---CCcEEEEEeccccccccc-----cccccccc--cccCCcccCHHHHHHHHHhCCC
Confidence 9995444 4578999999999 799999877532110000 00000000 0001122367789999999999
Q ss_pred ceeEEEe
Q 023625 261 SHYKITP 267 (279)
Q Consensus 261 ~~~~~~~ 267 (279)
+.+.+..
T Consensus 1388 ~~~~~~~ 1394 (2512)
T 2vz8_A 1388 HLVALKR 1394 (2512)
T ss_dssp EEEEEEE
T ss_pred ceeeecc
Confidence 9876643
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.27 E-value=0.0011 Score=53.04 Aligned_cols=106 Identities=10% Similarity=0.079 Sum_probs=68.9
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcc---cC-CCCeEEeeC-CCCC-CCCcc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQ---GT-NDNLDFLGG-NMFE-AIPQA 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~---~~-~~ri~~~~~-d~~~-~~~~~ 173 (279)
..+.+.+. +.+..+|||+||++|.++...+....-.++.++|+ +.-.+.-+ .. -..++|..+ |++. +...+
T Consensus 68 ~ei~ek~~--l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~ 145 (267)
T 3p8z_A 68 QWFVERNM--VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKC 145 (267)
T ss_dssp HHHHHTTS--SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCC
T ss_pred HHHHHhcC--CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccc
Confidence 34555553 67778999999999999998888776668999998 33332211 11 257899999 9765 33359
Q ss_pred ceeeehhhhccCC---hh-HHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 174 NAVLLKWILHNWN---DE-ESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 174 D~v~~~~vlh~~~---~~-~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
|.+++--.=-.=+ ++ ...++|.-+.+.|+ + |.++|
T Consensus 146 DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~---~-~~fc~ 184 (267)
T 3p8z_A 146 DTLLCDIGESSPSPTVEESRTIRVLKMVEPWLK---N-NQFCI 184 (267)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCS---S-CEEEE
T ss_pred cEEEEecCCCCCChhhhhhHHHHHHHHHHHhcc---c-CCEEE
Confidence 9988733221111 11 22456777788898 5 55554
No 295
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.10 E-value=0.0016 Score=59.27 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=70.9
Q ss_pred CCCEEEEecCCccHHHHHHHHHC---CCCeEEEeeC-hhHHhhccc------CC-CCeEEeeCCCCCC-CC-----ccce
Q 023625 113 GLKSLVDVAGGTGIMARAIATAF---PDIKCTVFDL-PHVVDNLQG------TN-DNLDFLGGNMFEA-IP-----QANA 175 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~------~~-~ri~~~~~d~~~~-~~-----~~D~ 175 (279)
...+|+|.+||+|.++..+++.. +..++.++|+ +.+...|+. .. +++.+..+|.+.. +| .||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 46799999999999999998885 3578999999 888877763 11 4678999998863 22 4999
Q ss_pred eeehhhh-ccCC------------------h--hHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 176 VLLKWIL-HNWN------------------D--EESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 176 v~~~~vl-h~~~------------------~--~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
|++.=.. ..|. + ..-..++.++.+.|++ |||++.++-
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~--~gGr~a~Vl 358 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQ--DNGVMAIVL 358 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCT--TTCEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCC--CceeEEEEe
Confidence 9974111 1111 0 0013578999999993 489887654
No 296
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.08 E-value=0.0066 Score=51.20 Aligned_cols=144 Identities=13% Similarity=0.088 Sum_probs=93.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeChhHHhhccc--------CCCCeEEeeCCCCCCC------Cc----
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDLPHVVDNLQG--------TNDNLDFLGGNMFEAI------PQ---- 172 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~--------~~~ri~~~~~d~~~~~------~~---- 172 (279)
.+...||++|||-=.....+. .| +++++-+|.|.+++..++ ..++..++..|+.+.+ .+
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred hCCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 345689999999988876665 24 488999999999876552 2467889999997631 11
Q ss_pred -cceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhc-c-hhhhh-----h-cCC
Q 023625 173 -ANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF-D-ILMVS-----L-FRG 243 (279)
Q Consensus 173 -~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~-d-~~~~~-----~-~~~ 243 (279)
.-++++-.+||.+++++...+|+.+.+.+. ||+. ++.|.+.++. .... ....... . +.-.. . .+-
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~---~gs~-l~~d~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~~l~~~ 252 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSA---VGSR-IAVETSPLHG-DEWR-EQMQLRFRRVSDALGFEQAVDVQEL 252 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCC---TTCE-EEEECCCTTC-SHHH-HHHHHHHHHHHC-----------CC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCC---CCeE-EEEEecCCCC-cchh-HHHHHHHHHHHHHcCCcCCCCcccc
Confidence 336677889999999999999999999887 4654 5556655432 1100 0000000 0 00000 0 011
Q ss_pred ee-CC-HHHHHHHHHHCCCcee
Q 023625 244 KE-RS-VDDWKKLFLAAGFSHY 263 (279)
Q Consensus 244 ~~-r~-~~e~~~ll~~aGf~~~ 263 (279)
.. ++ .++..++|.+.||+.+
T Consensus 253 ~~~~~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 253 IYHDENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp TTCCTTCCCHHHHHTTTTEEEE
T ss_pred ccCCCChHHHHHHHHHCcCccc
Confidence 11 25 6789999999999977
No 297
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.97 E-value=0.0022 Score=54.25 Aligned_cols=68 Identities=12% Similarity=0.167 Sum_probs=55.8
Q ss_pred hHHHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccC-CCCeEEeeCCCCC
Q 023625 99 IAGIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAF-PDIKCTVFDL-PHVVDNLQGT-NDNLDFLGGNMFE 168 (279)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~ri~~~~~d~~~ 168 (279)
...++++.+. ..++..+||..+|.|..+.+++++. |+.+++++|. +.+++.++.+ .+|++++.++|.+
T Consensus 45 Ll~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 45 LLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSA 115 (347)
T ss_dssp TTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGG
T ss_pred cHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 3466777765 5678899999999999999999985 7889999999 8888888643 4688888888754
No 298
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.95 E-value=0.0028 Score=52.27 Aligned_cols=106 Identities=12% Similarity=0.182 Sum_probs=65.1
Q ss_pred HHHHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhh---cccCC-CCeEEeeC-CCCC-CCCcc
Q 023625 101 GIVIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDN---LQGTN-DNLDFLGG-NMFE-AIPQA 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~---a~~~~-~ri~~~~~-d~~~-~~~~~ 173 (279)
..+.+.+. +.+..+|||+||++|.++...+....-.++.++|+ ..-.+. .+++. .-|.+..+ |++. +...+
T Consensus 84 ~ei~~~~~--l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~ 161 (321)
T 3lkz_A 84 RWLVERRF--LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECC 161 (321)
T ss_dssp HHHHHTTS--CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCC
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCC
Confidence 34444443 66778999999999999998887766557999998 332221 11221 23788888 8765 32348
Q ss_pred ceeeehhhhccCC----hh-HHHHHHHHHHHhCCCCCCC-cEEEE
Q 023625 174 NAVLLKWILHNWN----DE-ESVKLLKKCKEAIPSKDEG-GKVII 212 (279)
Q Consensus 174 D~v~~~~vlh~~~----~~-~~~~~L~~~~~~L~~~~pg-G~lli 212 (279)
|++++--. ---+ ++ ...++|.-+.+.|+ +| |-++|
T Consensus 162 D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~---~~~~~f~~ 202 (321)
T 3lkz_A 162 DTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLH---RGPREFCV 202 (321)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHT---TCCCEEEE
T ss_pred CEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhc---cCCCcEEE
Confidence 88876322 1111 11 22446666678887 35 55554
No 299
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.83 E-value=0.0022 Score=53.21 Aligned_cols=94 Identities=18% Similarity=0.174 Sum_probs=65.6
Q ss_pred CCCCEEEEecCCccHHHHHHHHHC-----CCCeEEEeeC-hh--------------------------HHhhccc-----
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAF-----PDIKCTVFDL-PH--------------------------VVDNLQG----- 154 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~-----p~~~~~~~D~-~~--------------------------~~~~a~~----- 154 (279)
...+.|||+|+..|..++.+++.. ++.+++++|. .. .++.+++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 346799999999999998887754 4778999994 21 1122221
Q ss_pred -C-CCCeEEeeCCCCC--C-CC--ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 155 -T-NDNLDFLGGNMFE--A-IP--QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 155 -~-~~ri~~~~~d~~~--~-~~--~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
. .++|+++.||+.+ + .+ .+|++++-.-.+ +.....|..+.+.|+ |||.|++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~---pGGiIv~ 242 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVS---VGGYVIV 242 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEE---EEEEEEE
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcC---CCEEEEE
Confidence 2 3899999999976 2 32 489888854221 234678999999999 6775544
No 300
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.57 E-value=0.055 Score=50.80 Aligned_cols=149 Identities=10% Similarity=0.106 Sum_probs=100.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCC--------CCeEEEeeChhHHhhccc-----------C------------------
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFP--------DIKCTVFDLPHVVDNLQG-----------T------------------ 155 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p--------~~~~~~~D~~~~~~~a~~-----------~------------------ 155 (279)
+...||-+|||.=.....|...+| +++++-+|.|++++.=++ .
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 467899999999999999988765 678888899988754221 0
Q ss_pred CCCeEEeeCCCCCC--C-----------Cc-cceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCC
Q 023625 156 NDNLDFLGGNMFEA--I-----------PQ-ANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQS 221 (279)
Q Consensus 156 ~~ri~~~~~d~~~~--~-----------~~-~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~ 221 (279)
.++..+++.|+.+. + ++ .-++++-.+|..++++++.++|+.+.+ +. ++.+++.|.+.+...
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~~----~~~~~~~e~~~~~~~ 261 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-ME----NSHFIILEQLIPKGP 261 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-SS----SEEEEEEEECCTTCT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-CC----CceEEEEEeecCCCC
Confidence 14889999999862 1 11 235667789999999999999999985 44 678888898766543
Q ss_pred CCchhhhhhhhcchhhhh-hcC--CeeCCHHHHHHHHHHCCCceeEEEec
Q 023625 222 QDKESMETQLCFDILMVS-LFR--GKERSVDDWKKLFLAAGFSHYKITPM 268 (279)
Q Consensus 222 ~~~~~~~~~~~~d~~~~~-~~~--~~~r~~~e~~~ll~~aGf~~~~~~~~ 268 (279)
.. ++... ....+...- ... ....+.++..+.|.+.||+.+...++
T Consensus 262 ~d-~f~~~-m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 262 FE-PFSKQ-MLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp TS-HHHHH-HHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred CC-hHHHH-HHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 33 11110 011110000 000 12337899999999999987665543
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.30 E-value=0.009 Score=51.21 Aligned_cols=55 Identities=13% Similarity=0.250 Sum_probs=43.0
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc--CCCCeEEeeCCCCC
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG--TNDNLDFLGGNMFE 168 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~~ri~~~~~d~~~ 168 (279)
...|||||.|.|.++..|+++....+++++++ +..+...++ ..++++++.+|+++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 57899999999999999999754447888887 555544432 23789999999975
No 302
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.14 E-value=0.02 Score=49.24 Aligned_cols=106 Identities=17% Similarity=0.155 Sum_probs=73.7
Q ss_pred hCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc-----------CCCCeEEeeCCCCC-C--CC-ccc
Q 023625 111 FEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG-----------TNDNLDFLGGNMFE-A--IP-QAN 174 (279)
Q Consensus 111 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~ri~~~~~d~~~-~--~~-~~D 174 (279)
..++.+|||+-+|.|.=+.++++..+.-.++..|+ +.-+...++ ...++.+...|... + .+ .||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 46678999999999999999999877777899998 544443321 23578888888765 1 23 599
Q ss_pred eeeeh--------hhh-------ccCChhH-------HHHHHHHHHHhCCCCCCCcEEEEEeeecCC
Q 023625 175 AVLLK--------WIL-------HNWNDEE-------SVKLLKKCKEAIPSKDEGGKVIIIDMAIEN 219 (279)
Q Consensus 175 ~v~~~--------~vl-------h~~~~~~-------~~~~L~~~~~~L~~~~pgG~lli~e~~~~~ 219 (279)
.|++- .++ ..+..++ -.++|.++.+.++ |||+|+...-.+..
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk---pGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK---PGGHVVYSTCSLSH 289 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEE---EEEEEEEEESCCCT
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEEeCCCch
Confidence 99862 111 2222222 2478999999999 79988876654443
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.10 E-value=0.012 Score=48.60 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=60.2
Q ss_pred hCCCCEEEEecC------CccHHHHHHHHHCCC-CeEEEeeChhHHhhcccCCCCeEEeeCCCCC-CC-Cccceeeehhh
Q 023625 111 FEGLKSLVDVAG------GTGIMARAIATAFPD-IKCTVFDLPHVVDNLQGTNDNLDFLGGNMFE-AI-PQANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~------G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~-~~-~~~D~v~~~~v 181 (279)
.+.+.+|||+|+ .+|.+ .+.+..|. ..++..|+.++...+ + .++.||+.+ .. ..+|+|++-..
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda----~--~~IqGD~~~~~~~~k~DLVISDMA 178 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDA----D--STLIGDCATVHTANKWDLIISDMY 178 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSS----S--EEEESCGGGEEESSCEEEEEECCC
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCC----C--eEEEccccccccCCCCCEEEecCC
Confidence 356789999995 78884 44555786 689999985443211 2 458899765 22 35999987221
Q ss_pred -------hccC--ChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 182 -------LHNW--NDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 182 -------lh~~--~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
-++- ...-+..+|.=+.+.|+ |||.+++
T Consensus 179 PNtTG~~D~d~~Rs~~L~ElALdfA~~~Lk---pGGsFvV 215 (344)
T 3r24_A 179 DPRTKHVTKENDSKEGFFTYLCGFIKQKLA---LGGSIAV 215 (344)
T ss_dssp CTTSCSSCSCCCCCCTHHHHHHHHHHHHEE---EEEEEEE
T ss_pred CCcCCccccchhHHHHHHHHHHHHHHHhCc---CCCEEEE
Confidence 1111 22246677888888999 7998876
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.87 E-value=0.012 Score=49.16 Aligned_cols=41 Identities=20% Similarity=0.095 Sum_probs=35.0
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG 154 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 154 (279)
.++..|||++||+|..+.++++. +.+++++|+ +.+++.|++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 46789999999999999998876 468999999 888887763
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.85 E-value=0.026 Score=47.22 Aligned_cols=130 Identities=21% Similarity=0.173 Sum_probs=73.1
Q ss_pred CCCEEEEecCCccHHHHHH----HHHCCCCe--EEEeeC-h--------hHHhh-cc-------c-CCCCe--EEeeCCC
Q 023625 113 GLKSLVDVAGGTGIMARAI----ATAFPDIK--CTVFDL-P--------HVVDN-LQ-------G-TNDNL--DFLGGNM 166 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l----~~~~p~~~--~~~~D~-~--------~~~~~-a~-------~-~~~ri--~~~~~d~ 166 (279)
+.-+|+|+|=|+|...... .+..|+.+ ++.++. + +.... .+ . ...++ ++.-||.
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 3458999999999876543 34567765 455553 1 10000 00 0 12344 4677887
Q ss_pred CC---CCC--ccceeeehhhhccCChh-HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhh
Q 023625 167 FE---AIP--QANAVLLKWILHNWNDE-ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSL 240 (279)
Q Consensus 167 ~~---~~~--~~D~v~~~~vlh~~~~~-~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~ 240 (279)
.+ .++ .+|++++-..--.-+++ -...+++.+++.++ |||++.-. .
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~---pgg~laTY----t---------------------- 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERID---EKGYWVSY----S---------------------- 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEE---EEEEEEES----C----------------------
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhC---CCcEEEEE----e----------------------
Confidence 55 223 48988873311111111 12368999999999 68866421 0
Q ss_pred cCCeeCCHHHHHHHHHHCCCceeEEEecCCceeEEEE
Q 023625 241 FRGKERSVDDWKKLFLAAGFSHYKITPMLGVRSLIEA 277 (279)
Q Consensus 241 ~~~~~r~~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~ 277 (279)
....+++-|++|||++.++--.++-.-++.+
T Consensus 227 ------aag~VRR~L~~aGF~V~k~~G~g~KReml~A 257 (308)
T 3vyw_A 227 ------SSLSVRKSLLTLGFKVGSSREIGRKRKGTVA 257 (308)
T ss_dssp ------CCHHHHHHHHHTTCEEEEEECC---CEEEEE
T ss_pred ------CcHHHHHHHHHCCCEEEecCCCCCCCceeEE
Confidence 1246788999999998777655544444444
No 306
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=94.55 E-value=0.21 Score=45.19 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=64.5
Q ss_pred CCCCEEEEecCCccHHHHHHHHHC-------------CCCeEEEeeC-hhHHhhccc-----CCCCeEEeeCCCCC-CC-
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAF-------------PDIKCTVFDL-PHVVDNLQG-----TNDNLDFLGGNMFE-AI- 170 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~~d~~~-~~- 170 (279)
....+|+|-.||+|.++....+.. ....+.++|+ +.+...|+. ..+...+..+|.+. +.
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLR 295 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGG
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchh
Confidence 345699999999999998776532 1346899999 777776662 12345677788765 31
Q ss_pred -----Cccceeeehhhhc---------cCC-----hhHHHHHHHHHHHhCCCC----CCCcEEEEEe
Q 023625 171 -----PQANAVLLKWILH---------NWN-----DEESVKLLKKCKEAIPSK----DEGGKVIIID 214 (279)
Q Consensus 171 -----~~~D~v~~~~vlh---------~~~-----~~~~~~~L~~~~~~L~~~----~pgG~lli~e 214 (279)
..||+|+..=.+- .++ .+.....+..+.+.|++. .|||++.++-
T Consensus 296 ~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 296 EMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp GCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred hhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 1499998743321 111 112235677777777520 1489887764
No 307
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=93.73 E-value=0.22 Score=42.45 Aligned_cols=125 Identities=10% Similarity=0.097 Sum_probs=74.6
Q ss_pred CEEEEecCCccHHHHHHHHHCCCC-eEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC----CC--ccceeeehhhhccCC
Q 023625 115 KSLVDVAGGTGIMARAIATAFPDI-KCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA----IP--QANAVLLKWILHNWN 186 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~----~~--~~D~v~~~~vlh~~~ 186 (279)
.+++|+-||.|.++..+.++.-.. .+..+|. +..++..+..-+...++.+|+.+- .+ .+|+++..-....++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 589999999999999999885322 4778898 777776665434556778888762 22 479998865543333
Q ss_pred hh--------HHHHHHHHHHHhCCCCCCC--cEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHH
Q 023625 187 DE--------ESVKLLKKCKEAIPSKDEG--GKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFL 256 (279)
Q Consensus 187 ~~--------~~~~~L~~~~~~L~~~~pg--G~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~ 256 (279)
.. ..-.++.++.+.++. -. -+++++|.+..=. + + .+.+.+.+.|+
T Consensus 83 ~ag~~~g~~d~r~~l~~~~~~~i~~--~~~~P~~~~~ENV~~l~-------------~--------~--~~~~~i~~~l~ 137 (343)
T 1g55_A 83 RIGRQGDMTDSRTNSFLHILDILPR--LQKLPKYILLENVKGFE-------------V--------S--STRDLLIQTIE 137 (343)
T ss_dssp -------------CHHHHHHHHGGG--CSSCCSEEEEEEETTGG-------------G--------S--HHHHHHHHHHH
T ss_pred hcCCcCCccCccchHHHHHHHHHHH--hcCCCCEEEEeCCcccc-------------C--------H--HHHHHHHHHHH
Confidence 21 111244434444432 11 3577777764210 0 0 14567888889
Q ss_pred HCCCceeE
Q 023625 257 AAGFSHYK 264 (279)
Q Consensus 257 ~aGf~~~~ 264 (279)
+.||.+..
T Consensus 138 ~~GY~v~~ 145 (343)
T 1g55_A 138 NCGFQYQE 145 (343)
T ss_dssp HTTEEEEE
T ss_pred HCCCeeEE
Confidence 99998654
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.69 E-value=0.2 Score=40.76 Aligned_cols=41 Identities=15% Similarity=0.077 Sum_probs=34.6
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG 154 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 154 (279)
.++..|||..||+|..+.+..+. +.+++++|+ +..++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~ 252 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANF 252 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 56789999999999999998876 568999999 777776653
No 309
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=90.92 E-value=0.2 Score=40.81 Aligned_cols=94 Identities=16% Similarity=0.182 Sum_probs=62.2
Q ss_pred CCEEEEecCCccHHHHHHHHH-------CCCCeEEEeeC----hhH------------------------Hhhc------
Q 023625 114 LKSLVDVAGGTGIMARAIATA-------FPDIKCTVFDL----PHV------------------------VDNL------ 152 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~-------~p~~~~~~~D~----~~~------------------------~~~a------ 152 (279)
...|+|+|+-.|..+..+++. .++-++.++|. |+. ++..
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 569999999999988886652 45678999993 211 0100
Q ss_pred -cc---CCCCeEEeeCCCCCC-------CC--ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 153 -QG---TNDNLDFLGGNMFEA-------IP--QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 153 -~~---~~~ri~~~~~d~~~~-------~~--~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+. ..++|+++.|++.+. .+ .+|++++-.=. -+.....|..+.+.|+ |||.|++-|
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----Y~~t~~~le~~~p~l~---~GGvIv~DD 217 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----YEPTKAVLEAIRPYLT---KGSIVAFDE 217 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----HHHHHHHHHHHGGGEE---EEEEEEESS
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----cchHHHHHHHHHHHhC---CCcEEEEcC
Confidence 01 147899999998752 12 37888774421 1334678999999999 577655533
No 310
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=90.66 E-value=0.34 Score=42.31 Aligned_cols=56 Identities=11% Similarity=0.082 Sum_probs=42.0
Q ss_pred CCCCEEEEecCCccHHHHHHH-HHCCC-CeEEEeeC-hhHHhhccc--------CC-CCeEEeeCCCC
Q 023625 112 EGLKSLVDVAGGTGIMARAIA-TAFPD-IKCTVFDL-PHVVDNLQG--------TN-DNLDFLGGNMF 167 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~-~~~p~-~~~~~~D~-~~~~~~a~~--------~~-~ri~~~~~d~~ 167 (279)
++...++|||++.|.++..++ +..+. .+++.++. |...+..++ .. ++++++..-+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 567899999999999999988 66765 79999998 776665442 12 56776665443
No 311
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.88 E-value=2 Score=35.91 Aligned_cols=83 Identities=14% Similarity=0.104 Sum_probs=52.2
Q ss_pred CCEEEEecCCc--cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCCccceeeehhhhccCChhH
Q 023625 114 LKSLVDVAGGT--GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIPQANAVLLKWILHNWNDEE 189 (279)
Q Consensus 114 ~~~vlDvG~G~--G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~~~D~v~~~~vlh~~~~~~ 189 (279)
..+|.=||+|. +.++..+.+.....+++++|. ++.++.+.+. .-+.-...|..+ -..++|+|++. .+++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~~~~~~~~~~~~~~~~aDvVila-----vp~~~ 106 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GIIDEGTTSIAKVEDFSPDFVMLS-----SPVRT 106 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSCSEEESCTTGGGGGCCSEEEEC-----SCGGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CCcchhcCCHHHHhhccCCEEEEe-----CCHHH
Confidence 36888998764 334445555433338999998 6677766653 212112233333 34468999885 35566
Q ss_pred HHHHHHHHHHhCC
Q 023625 190 SVKLLKKCKEAIP 202 (279)
Q Consensus 190 ~~~~L~~~~~~L~ 202 (279)
...+++++.+.++
T Consensus 107 ~~~vl~~l~~~l~ 119 (314)
T 3ggo_A 107 FREIAKKLSYILS 119 (314)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHhhccC
Confidence 7788999999998
No 312
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=87.32 E-value=1.7 Score=37.55 Aligned_cols=40 Identities=15% Similarity=0.304 Sum_probs=30.4
Q ss_pred CCCEEEEecCCccHHHHHHHHHC-------CCCeEEEeeChhHHhhc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAF-------PDIKCTVFDLPHVVDNL 152 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~-------p~~~~~~~D~~~~~~~a 152 (279)
..-.|+|+|+|+|.++..+++.. ..+++++++..+.+...
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~ 126 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQK 126 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHH
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHH
Confidence 34579999999999999888652 34689999995555433
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=86.85 E-value=2.2 Score=36.19 Aligned_cols=94 Identities=12% Similarity=0.161 Sum_probs=59.8
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC-----CCCCCC-----Cccceeee
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG-----NMFEAI-----PQANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~-----d~~~~~-----~~~D~v~~ 178 (279)
..++.+||-+|+|. |.++..+++...-.++++.|. ++-.+.+++......+-.. ++.+.. .++|+++-
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 56678999999875 888999998864338999997 6667777764222111111 111100 24788875
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.- .. ...+..+.++|+ |+|+++++..
T Consensus 249 ~~-----g~---~~~~~~~~~~l~---~~G~iv~~G~ 274 (356)
T 1pl8_A 249 CT-----GA---EASIQAGIYATR---SGGTLVLVGL 274 (356)
T ss_dssp CS-----CC---HHHHHHHHHHSC---TTCEEEECSC
T ss_pred CC-----CC---hHHHHHHHHHhc---CCCEEEEEec
Confidence 32 11 134677788899 7999988754
No 314
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=86.56 E-value=2.1 Score=36.08 Aligned_cols=128 Identities=13% Similarity=0.102 Sum_probs=76.3
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCe-E-EEeeC-hhHHhhcccCCCCeEEeeCCCCC-C---CC--ccceeeehhhhc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIK-C-TVFDL-PHVVDNLQGTNDNLDFLGGNMFE-A---IP--QANAVLLKWILH 183 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~-~-~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~---~~--~~D~v~~~~vlh 183 (279)
..-+++|+=||.|.++..+.++.-..+ + ...|. +..++..+..-+.. +..+|+.+ . ++ .+|+++..-...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQ 87 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCT
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCcc
Confidence 345899999999999999998753234 4 58898 66665544320111 56677765 2 23 479988765544
Q ss_pred cC-----------ChhHHHHHHHHHHH-hCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHH
Q 023625 184 NW-----------NDEESVKLLKKCKE-AIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDW 251 (279)
Q Consensus 184 ~~-----------~~~~~~~~L~~~~~-~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~ 251 (279)
.+ .|+ .-.++.++.+ .++....--+++++|.+..=. . + .+.+.+
T Consensus 88 ~fs~S~ag~~~~~~d~-r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~-------------~--------~--~~~~~i 143 (327)
T 3qv2_A 88 PYNNSIMSKHKDINDP-RAKSVLHLYRDILPYLINKPKHIFIENVPLFK-------------E--------S--LVFKEI 143 (327)
T ss_dssp TCSHHHHTTTCTTTCG-GGHHHHHHHHTTGGGCSSCCSEEEEEECGGGG-------------G--------S--HHHHHH
T ss_pred CcccccCCCCCCCccc-cchhHHHHHHHHHHHhccCCCEEEEEchhhhc-------------C--------h--HHHHHH
Confidence 44 232 2245555555 443100024688888764210 0 1 145678
Q ss_pred HHHHHHCCCceeEE
Q 023625 252 KKLFLAAGFSHYKI 265 (279)
Q Consensus 252 ~~ll~~aGf~~~~~ 265 (279)
.+.|++.|+.+...
T Consensus 144 ~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 144 YNILIKNQYYIKDI 157 (327)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHhCCCEEEEE
Confidence 88899999986533
No 315
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.23 E-value=5.2 Score=32.60 Aligned_cols=82 Identities=13% Similarity=0.124 Sum_probs=49.9
Q ss_pred CEEEEecCCc--cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHHH
Q 023625 115 KSLVDVAGGT--GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEESV 191 (279)
Q Consensus 115 ~~vlDvG~G~--G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~~ 191 (279)
.+|.=||+|. +.++..+++..+..++++.|. ++..+.+.+. ..+.....|..+....+|+|++. .++....
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~~~~~~~~~~~~~~aDvVila-----vp~~~~~ 80 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-GIVDEATADFKVFAALADVIILA-----VPIKKTI 80 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TSCSEEESCTTTTGGGCSEEEEC-----SCHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-CCcccccCCHHHhhcCCCEEEEc-----CCHHHHH
Confidence 5788888775 334445555544678999998 6666655432 11111223333223468998884 3555567
Q ss_pred HHHHHHHHh-CC
Q 023625 192 KLLKKCKEA-IP 202 (279)
Q Consensus 192 ~~L~~~~~~-L~ 202 (279)
.+++.+.+. ++
T Consensus 81 ~v~~~l~~~~l~ 92 (290)
T 3b1f_A 81 DFIKILADLDLK 92 (290)
T ss_dssp HHHHHHHTSCCC
T ss_pred HHHHHHHhcCCC
Confidence 788888887 87
No 316
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=85.93 E-value=3.5 Score=35.40 Aligned_cols=97 Identities=9% Similarity=0.079 Sum_probs=62.5
Q ss_pred CEEEEecCCccHHHHHHHHHCCCCe-EEEeeC-hhHHhhcccCCCCeEEeeCCCCCC----C-------Cccceeeehhh
Q 023625 115 KSLVDVAGGTGIMARAIATAFPDIK-CTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA----I-------PQANAVLLKWI 181 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~----~-------~~~D~v~~~~v 181 (279)
-+++|+=||.|.++..+.++. .+ +.++|. +..++..+..-+...++.+|+.+- + +.+|+++..-.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 479999999999999999884 44 558888 666665554334567788887651 1 35888887655
Q ss_pred hccCC-------hhHHHHHHHH---HHHhCCCCCCCcEEEEEeeecC
Q 023625 182 LHNWN-------DEESVKLLKK---CKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 182 lh~~~-------~~~~~~~L~~---~~~~L~~~~pgG~lli~e~~~~ 218 (279)
...++ ++..-.++.+ +.+.++ | +++++|.+..
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~---P--~~~v~ENV~g 122 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQ---P--LFFLAENVPG 122 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHHHHHHHC---C--SEEEEEECTT
T ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHHhC---C--CEEEEecchH
Confidence 44443 1112233333 334446 3 5788887753
No 317
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=85.45 E-value=2.9 Score=34.34 Aligned_cols=100 Identities=13% Similarity=0.065 Sum_probs=67.6
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC---CCCeEEeeCCCCC------CC-Cccceeeehhhh
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE------AI-PQANAVLLKWIL 182 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~------~~-~~~D~v~~~~vl 182 (279)
...+||+=+|||.++++.+. +.-+++.+|+ +..++..++. .++++++..|.++ +. +.+|+|++-=..
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 46789999999999999998 4468999999 7777766642 4689999999754 11 149999983222
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
.. .++..++++.+.+..+-. |+|.++|.=++.+
T Consensus 170 e~--k~~~~~vl~~L~~~~~r~-~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 170 ER--KEEYKEIPYAIKNAYSKF-STGLYCVWYPVVN 202 (283)
T ss_dssp CS--TTHHHHHHHHHHHHHHHC-TTSEEEEEEEESS
T ss_pred CC--CcHHHHHHHHHHHhCccC-CCeEEEEEEeccc
Confidence 21 123445555554432111 5898888776654
No 318
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=84.65 E-value=4.5 Score=30.04 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=30.7
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL 145 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 145 (279)
-..-|+|+|=|+|..=-+|.+.+|+-++.++|.
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 357899999999999999999999999999995
No 319
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=84.12 E-value=3.8 Score=31.52 Aligned_cols=95 Identities=13% Similarity=0.187 Sum_probs=56.4
Q ss_pred EEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCC----CccceeeehhhhccCChh
Q 023625 116 SLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAI----PQANAVLLKWILHNWNDE 188 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~----~~~D~v~~~~vlh~~~~~ 188 (279)
+||=. ||+|..+.+++++. .+.++++++. +...+... .+++++.+|+.++. .+.|+++.......-..+
T Consensus 2 kvlVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 2 KIGII-GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTT
T ss_pred eEEEE-cCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---CCCeEEeccccChhhhhhcCCCEEEECCcCCccccc
Confidence 45544 45666666666544 3468889987 54444332 67899999998742 357888765433222222
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 189 ESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 189 ~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
......+++.++++.. ..++++++..
T Consensus 78 ~~~~~~~~l~~a~~~~-~~~~~v~~SS 103 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGT-VSPRLLVVGG 103 (221)
T ss_dssp SHHHHHHHHHHHHCSC-CSSEEEEECC
T ss_pred hHHHHHHHHHHHHHhc-CCceEEEEec
Confidence 2345566666677642 2467777654
No 320
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.85 E-value=7.2 Score=30.02 Aligned_cols=95 Identities=11% Similarity=0.045 Sum_probs=59.1
Q ss_pred EEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC----CCccceeeehhhhc--cCC
Q 023625 116 SLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA----IPQANAVLLKWILH--NWN 186 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~----~~~~D~v~~~~vlh--~~~ 186 (279)
+||=. ||+|..+.+++++. .+.++++++. +....... ..+++++.+|+.++ ..+.|+|+...... ...
T Consensus 2 kilVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 2 KIAVL-GATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--GATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--CTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSC
T ss_pred EEEEE-cCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--CCCceEEecccccccHhhcccCCEEEECCccCCCcch
Confidence 34444 45677766666654 3568889987 44443322 35899999999874 23578887654331 111
Q ss_pred hhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 187 DEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 187 ~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
........+++.++++. .|++++++..
T Consensus 79 ~~~n~~~~~~l~~a~~~--~~~~~v~~SS 105 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRN--SDTLAVFILG 105 (224)
T ss_dssp THHHHHHHHHHHHTCTT--CCCEEEEECC
T ss_pred hhHHHHHHHHHHHHHHH--cCCcEEEEec
Confidence 23355667888888875 3577877753
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=83.72 E-value=2.1 Score=36.17 Aligned_cols=90 Identities=13% Similarity=0.113 Sum_probs=60.2
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCC-ccceeeehhhhccCCh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIP-QANAVLLKWILHNWND 187 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~~~~ 187 (279)
..+..+||-+|+|. |.++..+++.. ++++++.|. ++-.+.+++......+ .|. +... ++|+++-.-- .
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~--~~~-~~~~~~~D~vid~~g-----~ 244 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGVKHFY--TDP-KQCKEELDFIISTIP-----T 244 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTCSEEE--SSG-GGCCSCEEEEEECCC-----S
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCeec--CCH-HHHhcCCCEEEECCC-----c
Confidence 56678898899765 88888999876 569999997 7777777765322222 221 1122 6888875321 1
Q ss_pred hHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 188 EESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 188 ~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+ ..+..+.+.|+ |+|+++++..
T Consensus 245 ~---~~~~~~~~~l~---~~G~iv~~G~ 266 (348)
T 3two_A 245 H---YDLKDYLKLLT---YNGDLALVGL 266 (348)
T ss_dssp C---CCHHHHHTTEE---EEEEEEECCC
T ss_pred H---HHHHHHHHHHh---cCCEEEEECC
Confidence 1 13667778899 7999998754
No 322
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=83.48 E-value=1.5 Score=37.37 Aligned_cols=91 Identities=18% Similarity=0.198 Sum_probs=59.5
Q ss_pred CCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC-CCCC---CC--Cccceeeehhhhc
Q 023625 113 GLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG-NMFE---AI--PQANAVLLKWILH 183 (279)
Q Consensus 113 ~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~-d~~~---~~--~~~D~v~~~~vlh 183 (279)
+..+||=+| |+.|.++..+++.....++++.|. ++-.+.+++......+-.. |+.+ .. .++|+++-.-
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~--- 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTT--- 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECS---
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECC---
Confidence 566888887 567999999999866789999998 7777777764222111111 1111 11 2488877532
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.. ...+..+.++|+ ++|+++++.
T Consensus 248 --g~---~~~~~~~~~~l~---~~G~iv~~g 270 (363)
T 4dvj_A 248 --HT---DKHAAEIADLIA---PQGRFCLID 270 (363)
T ss_dssp --CH---HHHHHHHHHHSC---TTCEEEECS
T ss_pred --Cc---hhhHHHHHHHhc---CCCEEEEEC
Confidence 11 245778888999 799999873
No 323
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=83.43 E-value=2.5 Score=35.98 Aligned_cols=95 Identities=16% Similarity=0.103 Sum_probs=60.2
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEee--CCCCCC----CC-ccceeeehhh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLG--GNMFEA----IP-QANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~--~d~~~~----~~-~~D~v~~~~v 181 (279)
..+..+||-+|+|. |..+..+++...-.++++.|. ++-.+.+++......+-. .|+.+. .+ ++|+++-.--
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g 267 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTG 267 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCC
Confidence 45678999999876 888889988763336889987 777777765422111111 111110 11 4888875321
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
. ...++.+.+.|+ ++|+++++...
T Consensus 268 -----~---~~~~~~~~~~l~---~~G~iv~~G~~ 291 (371)
T 1f8f_A 268 -----S---PEILKQGVDALG---ILGKIAVVGAP 291 (371)
T ss_dssp -----C---HHHHHHHHHTEE---EEEEEEECCCC
T ss_pred -----C---HHHHHHHHHHHh---cCCEEEEeCCC
Confidence 1 245778888999 79999887643
No 324
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=83.13 E-value=2.5 Score=35.48 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=60.7
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC--CCCC----CCccceeeehhhh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN--MFEA----IPQANAVLLKWIL 182 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d--~~~~----~~~~D~v~~~~vl 182 (279)
..+..+||-.|+|. |..+..+++.. ++++++.|. ++-.+.+++......+-..+ +.+. .+++|+++....
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g- 241 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAV- 241 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSC-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCC-
Confidence 56678888899764 99999999986 569999998 77777777653222221111 1110 024777765321
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
. ...++.+.++|+ |+|+++++..
T Consensus 242 ---~----~~~~~~~~~~l~---~~G~iv~~G~ 264 (340)
T 3s2e_A 242 ---S----PKAFSQAIGMVR---RGGTIALNGL 264 (340)
T ss_dssp ---C----HHHHHHHHHHEE---EEEEEEECSC
T ss_pred ---C----HHHHHHHHHHhc---cCCEEEEeCC
Confidence 1 245778888899 7999987653
No 325
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=82.79 E-value=1.8 Score=37.37 Aligned_cols=101 Identities=15% Similarity=0.035 Sum_probs=62.6
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC---CC-CCC-----CC-ccceeee
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG---NM-FEA-----IP-QANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~---d~-~~~-----~~-~~D~v~~ 178 (279)
..+..+||-+|+|. |.++..+++...-.++++.|. ++-++.+++... +++.. |+ .+. .. ++|+++-
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa--~~i~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF--ETIDLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC--EEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC--cEEcCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 56778999999876 889999998764338999997 777777776532 23221 22 110 01 4888875
Q ss_pred hhhhccC-C-h----hHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 179 KWILHNW-N-D----EESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 179 ~~vlh~~-~-~----~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.---... . + ......++.+.++|+ ++|+++++...
T Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~---~gG~iv~~G~~ 301 (398)
T 2dph_A 261 AVGFEAHGLGDEANTETPNGALNSLFDVVR---AGGAIGIPGIY 301 (398)
T ss_dssp CSCTTCBCSGGGTTSBCTTHHHHHHHHHEE---EEEEEECCSCC
T ss_pred CCCCccccccccccccccHHHHHHHHHHHh---cCCEEEEeccc
Confidence 4321100 0 0 001135777888899 79999876543
No 326
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=82.28 E-value=1.3 Score=41.43 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=25.6
Q ss_pred CCCEEEEecCCccHHHHHHHHHC-------CC-----CeEEEeeC
Q 023625 113 GLKSLVDVAGGTGIMARAIATAF-------PD-----IKCTVFDL 145 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~-------p~-----~~~~~~D~ 145 (279)
+.-+|+|+|-|+|......++.+ |. ++++.++.
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~ 102 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEK 102 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeC
Confidence 34589999999999998887753 32 56888875
No 327
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=82.11 E-value=11 Score=26.42 Aligned_cols=80 Identities=10% Similarity=0.106 Sum_probs=46.5
Q ss_pred CEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeeehhhhcc
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLLKWILHN 184 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~~~vlh~ 184 (279)
.+|+=+|+ |..+..+++.. .+.+++++|. +..++..+.. ..+.+..+|..++ ..++|+++..-
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~---- 77 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-IDALVINGDCTKIKTLEDAGIEDADMYIAVT---- 77 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-CSSEEEESCTTSHHHHHHTTTTTCSEEEECC----
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-cCcEEEEcCCCCHHHHHHcCcccCCEEEEee----
Confidence 47888876 55555555433 2467999998 6655544421 2456677776542 23588887752
Q ss_pred CChhHHHHHHHHHHHhCC
Q 023625 185 WNDEESVKLLKKCKEAIP 202 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~ 202 (279)
++++....+..+.+.++
T Consensus 78 -~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 78 -GKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp -SCHHHHHHHHHHHHHTT
T ss_pred -CCchHHHHHHHHHHHcC
Confidence 23333344555566677
No 328
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=81.98 E-value=3.2 Score=31.67 Aligned_cols=90 Identities=13% Similarity=0.113 Sum_probs=56.8
Q ss_pred hCCCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC---------C--Ccccee
Q 023625 111 FEGLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA---------I--PQANAV 176 (279)
Q Consensus 111 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~---------~--~~~D~v 176 (279)
..+..+||..| +|.|..+..+++.. +.++++.|. ++..+.+++......+ |..++ . .++|++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~~D~v 111 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGVEYVG---DSRSVDFADEILELTDGYGVDVV 111 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCCSEEE---ETTCSTHHHHHHHHTTTCCEEEE
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEe---eCCcHHHHHHHHHHhCCCCCeEE
Confidence 45678999999 46677777777764 468999998 5556555543222111 22111 1 147887
Q ss_pred eehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 177 LLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 177 ~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
+-.. .. ..++.+.+.|+ |+|+++++...
T Consensus 112 i~~~-----g~----~~~~~~~~~l~---~~G~~v~~g~~ 139 (198)
T 1pqw_A 112 LNSL-----AG----EAIQRGVQILA---PGGRFIELGKK 139 (198)
T ss_dssp EECC-----CT----HHHHHHHHTEE---EEEEEEECSCG
T ss_pred EECC-----ch----HHHHHHHHHhc---cCCEEEEEcCC
Confidence 7532 22 34778888999 79999887543
No 329
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=81.96 E-value=18 Score=28.93 Aligned_cols=94 Identities=13% Similarity=0.064 Sum_probs=57.4
Q ss_pred CEEEEecCCccHHHHHHHHHCC--CCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CCCccceeeehhhhccCChhHH
Q 023625 115 KSLVDVAGGTGIMARAIATAFP--DIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AIPQANAVLLKWILHNWNDEES 190 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~~~~D~v~~~~vlh~~~~~~~ 190 (279)
.+||=.| + |.++.+++++.- +.++++++. +........ .+++++.+|+.+ ...++|+|+.........+...
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~~ 81 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--SGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVL 81 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--TTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHHH
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--CCCeEEEecccccccCCCCEEEECCCccccccHHH
Confidence 5788888 4 998888887652 457888887 443333222 578999999876 3446888876654443333333
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 191 VKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 191 ~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
..+++.+.+.-. .-.+++.+..
T Consensus 82 ~~l~~a~~~~~~---~~~~~v~~Ss 103 (286)
T 3ius_A 82 AALGDQIAARAA---QFRWVGYLST 103 (286)
T ss_dssp HHHHHHHHHTGG---GCSEEEEEEE
T ss_pred HHHHHHHHhhcC---CceEEEEeec
Confidence 445555544212 1256665554
No 330
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=81.70 E-value=7 Score=33.20 Aligned_cols=94 Identities=13% Similarity=0.093 Sum_probs=58.8
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC----CCCC-----CCccceeeeh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN----MFEA-----IPQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d----~~~~-----~~~~D~v~~~ 179 (279)
..+..+||-+|+|. |..+..+++...-.++++.|. ++-.+.+++......+-..+ +.+. ..++|+++-.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 45678899898764 888888888864337999987 77777776542221111111 1110 0247887753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCC-cEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEG-GKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pg-G~lli~e~ 215 (279)
- .. ...++.+.++|+ ++ |+++++..
T Consensus 270 ~-----g~---~~~~~~~~~~l~---~~~G~iv~~G~ 295 (374)
T 1cdo_A 270 V-----GN---VGVMRNALESCL---KGWGVSVLVGW 295 (374)
T ss_dssp S-----CC---HHHHHHHHHTBC---TTTCEEEECSC
T ss_pred C-----CC---HHHHHHHHHHhh---cCCcEEEEEcC
Confidence 2 11 235778888999 79 99987654
No 331
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.64 E-value=7.9 Score=31.32 Aligned_cols=86 Identities=15% Similarity=0.087 Sum_probs=49.0
Q ss_pred EEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCC-ccceeeehhhhccCChhHHH
Q 023625 116 SLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIP-QANAVLLKWILHNWNDEESV 191 (279)
Q Consensus 116 ~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~~~~~~~~ 191 (279)
+|.=||+|. |. ++..+.+.....+++++|. ++.++.+++...... ...|..+... ++|+|++. .++....
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~aDvVila-----vp~~~~~ 76 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDE-GTTSIAKVEDFSPDFVMLS-----SPVRTFR 76 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSE-EESCGGGGGGTCCSEEEEC-----SCHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccc-ccCCHHHHhcCCCCEEEEc-----CCHHHHH
Confidence 577788764 33 2333333322237899998 666666554311111 1223322344 68988874 3556667
Q ss_pred HHHHHHHHhCCCCCCCcEE
Q 023625 192 KLLKKCKEAIPSKDEGGKV 210 (279)
Q Consensus 192 ~~L~~~~~~L~~~~pgG~l 210 (279)
.+++++.+.++ ++..+
T Consensus 77 ~v~~~l~~~l~---~~~iv 92 (281)
T 2g5c_A 77 EIAKKLSYILS---EDATV 92 (281)
T ss_dssp HHHHHHHHHSC---TTCEE
T ss_pred HHHHHHHhhCC---CCcEE
Confidence 88888888898 56533
No 332
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=81.37 E-value=15 Score=28.27 Aligned_cols=136 Identities=9% Similarity=0.083 Sum_probs=69.3
Q ss_pred EEEEecCCccHHHHHHHHHC---CCCeEEEeeC-hh-HHhhcccCCCCeEEeeCCCCCC--C----Cccceeeehhhhcc
Q 023625 116 SLVDVAGGTGIMARAIATAF---PDIKCTVFDL-PH-VVDNLQGTNDNLDFLGGNMFEA--I----PQANAVLLKWILHN 184 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-~~-~~~~a~~~~~ri~~~~~d~~~~--~----~~~D~v~~~~vlh~ 184 (279)
+||=.| |+|..+.++++++ .+.++++++. +. .++.......++.++.+|+.++ . .+.|+++......
T Consensus 7 ~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~- 84 (221)
T 3r6d_A 7 YITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES- 84 (221)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC-
T ss_pred EEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC-
Confidence 466555 4555555555432 4678999988 44 4333221236899999999863 1 3578887654322
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcC-CeeCCHHHHHHHHHHCCCcee
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFR-GKERSVDDWKKLFLAAGFSHY 263 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~r~~~e~~~ll~~aGf~~~ 263 (279)
+-+...+++.+.+. ..++++.+...........+. ..+... ..+ .-..++.....++++.|+...
T Consensus 85 --n~~~~~~~~~~~~~-----~~~~iv~iSs~~~~~~~~~~~---~~~~~~----~~~~~y~~~K~~~e~~~~~~~i~~~ 150 (221)
T 3r6d_A 85 --GSDMASIVKALSRX-----NIRRVIGVSMAGLSGEFPVAL---EKWTFD----NLPISYVQGERQARNVLRESNLNYT 150 (221)
T ss_dssp --HHHHHHHHHHHHHT-----TCCEEEEEEETTTTSCSCHHH---HHHHHH----TSCHHHHHHHHHHHHHHHHSCSEEE
T ss_pred --ChhHHHHHHHHHhc-----CCCeEEEEeeceecCCCCccc---cccccc----ccccHHHHHHHHHHHHHHhCCCCEE
Confidence 11133344433321 236777666543322211110 000000 000 011145667778888898876
Q ss_pred EEEe
Q 023625 264 KITP 267 (279)
Q Consensus 264 ~~~~ 267 (279)
-+.+
T Consensus 151 ~vrp 154 (221)
T 3r6d_A 151 ILRL 154 (221)
T ss_dssp EEEE
T ss_pred EEec
Confidence 5554
No 333
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=81.22 E-value=8 Score=27.48 Aligned_cols=62 Identities=11% Similarity=0.158 Sum_probs=41.4
Q ss_pred CCEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeeeh
Q 023625 114 LKSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLLK 179 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~~ 179 (279)
..+|+=+|+| .++..+++.. .+.+++++|. ++.++.++.. .+.++.+|..++ ..++|+++..
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 3578888884 4555555543 2568999998 7766666543 577888988763 2358887764
No 334
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=81.07 E-value=13 Score=31.20 Aligned_cols=93 Identities=12% Similarity=0.179 Sum_probs=59.0
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC---CCCCC----C-----Ccccee
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG---NMFEA----I-----PQANAV 176 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~---d~~~~----~-----~~~D~v 176 (279)
..+..+||-+|+|. |..+..+++.. ++++++.|. ++-.+.+++......+-.. |+.+. . .++|++
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~v 244 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVT 244 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEE
Confidence 45678899899765 88888888875 567888987 6777777654222222111 21111 0 247887
Q ss_pred eehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 177 LLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 177 ~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+-.- .. ...++.+.++|+ |+|+++++..
T Consensus 245 id~~-----g~---~~~~~~~~~~l~---~~G~iv~~G~ 272 (352)
T 1e3j_A 245 IDCS-----GN---EKCITIGINITR---TGGTLMLVGM 272 (352)
T ss_dssp EECS-----CC---HHHHHHHHHHSC---TTCEEEECSC
T ss_pred EECC-----CC---HHHHHHHHHHHh---cCCEEEEEec
Confidence 7532 11 134677788899 7999988754
No 335
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=80.57 E-value=2.6 Score=35.46 Aligned_cols=94 Identities=15% Similarity=0.180 Sum_probs=62.1
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC-CCCCC----C--ccceeeehhh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN-MFEAI----P--QANAVLLKWI 181 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d-~~~~~----~--~~D~v~~~~v 181 (279)
..+..+||-+|+|. |.++..+++.....++++.|. ++-.+.+++......+-..+ +.+.. + ++|+++-.-
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~- 247 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFV- 247 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESS-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECC-
Confidence 56678898888765 889999999876789999998 77777777652222221111 11110 1 478877532
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.. ...++.+.++|+ ++|+++++..
T Consensus 248 ----G~---~~~~~~~~~~l~---~~G~iv~~G~ 271 (345)
T 3jv7_A 248 ----GA---QSTIDTAQQVVA---VDGHISVVGI 271 (345)
T ss_dssp ----CC---HHHHHHHHHHEE---EEEEEEECSC
T ss_pred ----CC---HHHHHHHHHHHh---cCCEEEEECC
Confidence 22 135778888899 7999988764
No 336
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=80.52 E-value=14 Score=26.75 Aligned_cols=84 Identities=17% Similarity=0.108 Sum_probs=47.5
Q ss_pred CCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeeehhhh
Q 023625 112 EGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLLKWIL 182 (279)
Q Consensus 112 ~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~~~vl 182 (279)
....+|+=+|+|. |......+.+. +.+++++|. ++.++.++.. ..+.++.+|..++ ..++|+++..-
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~-~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~-- 92 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSE-FSGFTVVGDAAEFETLKECGMEKADMVFAFT-- 92 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTT-CCSEEEESCTTSHHHHHTTTGGGCSEEEECS--
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhc-CCCcEEEecCCCHHHHHHcCcccCCEEEEEe--
Confidence 4567899998754 33333333332 468999998 6666655521 2455666775431 22588887742
Q ss_pred ccCChhHHHHHHHHHHHhCC
Q 023625 183 HNWNDEESVKLLKKCKEAIP 202 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~ 202 (279)
+++.....+..+.+.+.
T Consensus 93 ---~~~~~~~~~~~~~~~~~ 109 (155)
T 2g1u_A 93 ---NDDSTNFFISMNARYMF 109 (155)
T ss_dssp ---SCHHHHHHHHHHHHHTS
T ss_pred ---CCcHHHHHHHHHHHHHC
Confidence 33333444445555555
No 337
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=79.94 E-value=12 Score=31.34 Aligned_cols=93 Identities=11% Similarity=0.096 Sum_probs=58.2
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEee--CCCCCC----CC--ccceeeehh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLG--GNMFEA----IP--QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~--~d~~~~----~~--~~D~v~~~~ 180 (279)
..+..+||=+|+|. |.++..++++.-..++++.|. ++-.+.+++......+-. .|+.+. .. ++|+++...
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~ 240 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCA 240 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECC
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEec
Confidence 45678888898875 456667777777889999998 666777766432222222 222111 11 356665432
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
. . ...+....++++ ++|+++++.
T Consensus 241 ~----~----~~~~~~~~~~l~---~~G~~v~~g 263 (348)
T 4eez_A 241 V----A----RIAFEQAVASLK---PMGKMVAVA 263 (348)
T ss_dssp S----C----HHHHHHHHHTEE---EEEEEEECC
T ss_pred c----C----cchhheeheeec---CCceEEEEe
Confidence 2 1 245777888899 799988765
No 338
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=79.89 E-value=6.7 Score=33.32 Aligned_cols=94 Identities=7% Similarity=-0.002 Sum_probs=58.9
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC----CCCC----C-Cccceeeeh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN----MFEA----I-PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d----~~~~----~-~~~D~v~~~ 179 (279)
..+..+||-+|+|. |.++..+++...-.++++.|. ++-.+.+++......+-..+ +.+. . .++|+++-.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~ 268 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC 268 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 45678899998764 888888888764337899986 77677776642221121111 1110 1 258888753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCC-cEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEG-GKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pg-G~lli~e~ 215 (279)
- .. ...+..+.++++ ++ |+++++..
T Consensus 269 ~-----g~---~~~~~~~~~~l~---~~~G~iv~~G~ 294 (373)
T 1p0f_A 269 A-----GR---IETMMNALQSTY---CGSGVTVVLGL 294 (373)
T ss_dssp S-----CC---HHHHHHHHHTBC---TTTCEEEECCC
T ss_pred C-----CC---HHHHHHHHHHHh---cCCCEEEEEcc
Confidence 2 11 235778888999 79 99987654
No 339
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=79.78 E-value=2.3 Score=39.60 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=24.6
Q ss_pred CCEEEEecCCccHHHHHHHHHC-------CC-----CeEEEeeC
Q 023625 114 LKSLVDVAGGTGIMARAIATAF-------PD-----IKCTVFDL 145 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~-------p~-----~~~~~~D~ 145 (279)
.-+|+|+|-|+|.......+.+ |. ++++.++.
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~ 110 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK 110 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeC
Confidence 3589999999999988877753 22 45888875
No 340
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=79.76 E-value=2.6 Score=35.57 Aligned_cols=127 Identities=10% Similarity=0.108 Sum_probs=73.8
Q ss_pred CEEEEecCCccHHHHHHHHHCCCCe-EEEeeC-hhHHhhcccCCCCeEEeeCCCCC-C---CC--ccceeeehhhhccCC
Q 023625 115 KSLVDVAGGTGIMARAIATAFPDIK-CTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-A---IP--QANAVLLKWILHNWN 186 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~---~~--~~D~v~~~~vlh~~~ 186 (279)
-+++|+=||.|.++..+.++.-..+ +...|. +..++.-+..-+...+..+|+.+ . .+ .+|+++.......++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 4799999999999999998854333 567888 66555544322344566777765 1 22 478887654443332
Q ss_pred --------hhHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHHC
Q 023625 187 --------DEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAA 258 (279)
Q Consensus 187 --------~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~a 258 (279)
++..-.++.++.+.++... .-+++++|.+..-.. + .+.+.+.+.|++.
T Consensus 84 ~ag~~~~~~d~r~~L~~~~~r~i~~~~-~P~~~vlENV~gl~~---------------------~--~~~~~i~~~l~~~ 139 (333)
T 4h0n_A 84 RNGKYLDDNDPRTNSFLYLIGILDQLD-NVDYILMENVKGFEN---------------------S--TVRNLFIDKLKEC 139 (333)
T ss_dssp ETTEECCTTCTTSCCHHHHHHHGGGCT-TCCEEEEEECTTGGG---------------------S--HHHHHHHHHHHHT
T ss_pred hhhhccCCcCcccccHHHHHHHHHHhc-CCCEEEEecchhhhh---------------------h--hHHHHHHHHHHhC
Confidence 1111123333333332100 136788887642100 0 1346788889999
Q ss_pred CCceeEE
Q 023625 259 GFSHYKI 265 (279)
Q Consensus 259 Gf~~~~~ 265 (279)
|+.+...
T Consensus 140 GY~v~~~ 146 (333)
T 4h0n_A 140 NFIYQEF 146 (333)
T ss_dssp TEEEEEE
T ss_pred CCeEEEE
Confidence 9986543
No 341
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=79.56 E-value=9 Score=32.53 Aligned_cols=94 Identities=10% Similarity=0.008 Sum_probs=58.8
Q ss_pred hCCCCEEEEecCC-ccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC----CCCC-----CCccceeeeh
Q 023625 111 FEGLKSLVDVAGG-TGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN----MFEA-----IPQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d----~~~~-----~~~~D~v~~~ 179 (279)
..+..+||-+|+| .|.++..+++...-.++++.|. ++-.+.+++......+-..+ +.+. ..++|+++-.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEEC
Confidence 4567789989876 4888888898864337999987 77677776542221111111 1110 0247888753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCC-cEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEG-GKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pg-G~lli~e~ 215 (279)
- .. ...+..+.++++ ++ |+++++..
T Consensus 273 ~-----G~---~~~~~~~~~~l~---~~~G~iv~~G~ 298 (376)
T 1e3i_A 273 A-----GT---AQTLKAAVDCTV---LGWGSCTVVGA 298 (376)
T ss_dssp S-----CC---HHHHHHHHHTBC---TTTCEEEECCC
T ss_pred C-----CC---HHHHHHHHHHhh---cCCCEEEEECC
Confidence 2 11 245778888999 79 99987654
No 342
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=79.47 E-value=6.8 Score=34.09 Aligned_cols=88 Identities=11% Similarity=0.142 Sum_probs=54.0
Q ss_pred CCEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeeehhhhc
Q 023625 114 LKSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLLKWILH 183 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~~~vlh 183 (279)
..+|+=+|+| .++..+++.. .+..++++|. +..++.++.. .+.++.||..++ ...+|++++.--
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~--g~~vi~GDat~~~~L~~agi~~A~~viv~~~-- 77 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF--GMKVFYGDATRMDLLESAGAAKAEVLINAID-- 77 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT--TCCCEESCTTCHHHHHHTTTTTCSEEEECCS--
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC--CCeEEEcCCCCHHHHHhcCCCccCEEEECCC--
Confidence 3467778774 4554444433 3578999999 8888877753 567888998763 235888876421
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
+++....+.. ..+.+. |..++++.
T Consensus 78 --~~~~n~~i~~-~ar~~~---p~~~Iiar 101 (413)
T 3l9w_A 78 --DPQTNLQLTE-MVKEHF---PHLQIIAR 101 (413)
T ss_dssp --SHHHHHHHHH-HHHHHC---TTCEEEEE
T ss_pred --ChHHHHHHHH-HHHHhC---CCCeEEEE
Confidence 2344444444 444556 46666654
No 343
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=79.30 E-value=5 Score=34.19 Aligned_cols=95 Identities=13% Similarity=0.182 Sum_probs=59.9
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEe--eCCCCC---C---C--Cccceeee
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFL--GGNMFE---A---I--PQANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~--~~d~~~---~---~--~~~D~v~~ 178 (279)
..+..+||-+|+|. |.++..+++...-.++++.|. +.-.+.+++......+- ..|+.+ . . .++|+++-
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid 259 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIE 259 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEE
Confidence 56678888888765 888889998764448999988 66677666532111111 112110 0 1 15888875
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.- .. ...++.+.++|+ +||+++++...
T Consensus 260 ~~-----G~---~~~~~~~~~~l~---~~G~vv~~G~~ 286 (370)
T 4ej6_A 260 CA-----GV---AETVKQSTRLAK---AGGTVVILGVL 286 (370)
T ss_dssp CS-----CC---HHHHHHHHHHEE---EEEEEEECSCC
T ss_pred CC-----CC---HHHHHHHHHHhc---cCCEEEEEecc
Confidence 32 21 245777888899 79999887644
No 344
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=79.16 E-value=9.5 Score=32.36 Aligned_cols=94 Identities=9% Similarity=0.005 Sum_probs=58.4
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC----CCCC----C-Cccceeeeh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN----MFEA----I-PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d----~~~~----~-~~~D~v~~~ 179 (279)
..+..+||-+|+|. |..+..+++...-.++++.|. ++-.+.+++......+-..+ +.+. . .++|+++-.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 268 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEEC
Confidence 45678899898765 888888888764337899987 77777776542221111111 1110 0 147887753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCC-cEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEG-GKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pg-G~lli~e~ 215 (279)
- .. ...++.+.++++ ++ |+++++..
T Consensus 269 ~-----g~---~~~~~~~~~~l~---~~~G~iv~~G~ 294 (374)
T 2jhf_A 269 I-----GR---LDTMVTALSCCQ---EAYGVSVIVGV 294 (374)
T ss_dssp S-----CC---HHHHHHHHHHBC---TTTCEEEECSC
T ss_pred C-----CC---HHHHHHHHHHhh---cCCcEEEEecc
Confidence 2 11 235777888899 79 99887654
No 345
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=79.14 E-value=20 Score=27.92 Aligned_cols=86 Identities=12% Similarity=0.080 Sum_probs=53.7
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCC--CeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeeehhhh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPD--IKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLLKWIL 182 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~~~vl 182 (279)
...+|+=+|+ |..+..+++..-. . ++++|. ++.++.++ ..+.++.+|..++ ..++|++++..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-- 79 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKANVRGARAVIVDL-- 79 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---TTCEEEESCTTCHHHHHHTTCTTCSEEEECC--
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC--
Confidence 3467888887 6888888887643 4 888888 66666555 3588999998752 23588887642
Q ss_pred ccCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 183 HNWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
++++.........+.+. |+.+++.
T Consensus 80 ---~~d~~n~~~~~~a~~~~---~~~~iia 103 (234)
T 2aef_A 80 ---ESDSETIHCILGIRKID---ESVRIIA 103 (234)
T ss_dssp ---SCHHHHHHHHHHHHHHC---SSSEEEE
T ss_pred ---CCcHHHHHHHHHHHHHC---CCCeEEE
Confidence 33333333344445566 4555554
No 346
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=77.91 E-value=7.9 Score=33.20 Aligned_cols=98 Identities=15% Similarity=0.112 Sum_probs=61.7
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC---C-CCCC-----C-Cccceeee
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG---N-MFEA-----I-PQANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~---d-~~~~-----~-~~~D~v~~ 178 (279)
..+..+||-+|+|. |.++..+++...-.++++.|. ++-++.+++... +.+.. + +.+. . .++|+|+-
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa--~~i~~~~~~~~~~~v~~~t~g~g~Dvvid 260 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF--EIADLSLDTPLHEQIAALLGEPEVDCAVD 260 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC--EEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC--cEEccCCcchHHHHHHHHhCCCCCCEEEE
Confidence 56678899899765 889999999864337889997 777777776532 22221 1 1110 1 14888875
Q ss_pred hhh----------hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 179 KWI----------LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 179 ~~v----------lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.-- .|+-.+ ...++.+.++|+ ++|+++++...
T Consensus 261 ~~G~~~~~~~~~~~~~~~~---~~~~~~~~~~l~---~~G~iv~~G~~ 302 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAP---ATVLNSLMQVTR---VAGKIGIPGLY 302 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCT---THHHHHHHHHEE---EEEEEEECSCC
T ss_pred CCCCcccccccccccccch---HHHHHHHHHHHh---cCCEEEEeccc
Confidence 322 111111 135777888899 79999877643
No 347
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=77.82 E-value=2.2 Score=36.06 Aligned_cols=94 Identities=21% Similarity=0.241 Sum_probs=58.8
Q ss_pred hCCCCEEEEecCC--ccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC--C----CCCC--Cccceeeeh
Q 023625 111 FEGLKSLVDVAGG--TGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN--M----FEAI--PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G--~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d--~----~~~~--~~~D~v~~~ 179 (279)
..+..+||-.|+| .|..+..+++...++++++.|. ++-.+.+++......+-..+ . .+-. .++|+++-.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEEC
Confidence 5567899999987 6778888888764678999997 66666665432221121111 1 0001 247877753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
. .. ...++.+.++|+ |+|+++++..
T Consensus 248 ~-----g~---~~~~~~~~~~l~---~~G~iv~~g~ 272 (347)
T 1jvb_A 248 N-----NS---EKTLSVYPKALA---KQGKYVMVGL 272 (347)
T ss_dssp C-----CC---HHHHTTGGGGEE---EEEEEEECCS
T ss_pred C-----CC---HHHHHHHHHHHh---cCCEEEEECC
Confidence 2 11 135777888899 7999887654
No 348
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=77.81 E-value=7.8 Score=33.01 Aligned_cols=95 Identities=14% Similarity=0.099 Sum_probs=60.7
Q ss_pred hCCCCEEEEecCC-ccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC----CCCCC----C-Cccceeeeh
Q 023625 111 FEGLKSLVDVAGG-TGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG----NMFEA----I-PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~----d~~~~----~-~~~D~v~~~ 179 (279)
..+..+||-+|+| .|.++..+++...-.++++.|. ++-++.+++......+-.. |+.+. . .++|+++-.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~ 270 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFEC 270 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEEC
Confidence 4567788888876 4888888888764337999996 7778888775322222111 11110 1 158888753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCC-cEEEEEeee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEG-GKVIIIDMA 216 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pg-G~lli~e~~ 216 (279)
- .. ...+..+.++++ +| |+++++...
T Consensus 271 ~-----g~---~~~~~~~~~~l~---~g~G~iv~~G~~ 297 (378)
T 3uko_A 271 I-----GN---VSVMRAALECCH---KGWGTSVIVGVA 297 (378)
T ss_dssp S-----CC---HHHHHHHHHTBC---TTTCEEEECSCC
T ss_pred C-----CC---HHHHHHHHHHhh---ccCCEEEEEccc
Confidence 2 22 245778888999 76 999887643
No 349
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=77.58 E-value=14 Score=26.35 Aligned_cols=88 Identities=20% Similarity=0.181 Sum_probs=51.9
Q ss_pred CCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeeehhhhcc
Q 023625 114 LKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLLKWILHN 184 (279)
Q Consensus 114 ~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~~~vlh~ 184 (279)
..+|+=+|+|. |......+.+ .+.+++++|. ++.++.++. ..+.++.+|..++ ...+|++++.--
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~--~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~--- 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRE--RGVRAVLGNAANEEIMQLAHLECAKWLILTIP--- 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH--TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS---
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHH--cCCCEEECCCCCHHHHHhcCcccCCEEEEECC---
Confidence 35788888754 3333333333 3568999998 777777665 3677888998763 125888876421
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
++++...+... .+.+. |+.+++.
T Consensus 81 -~~~~n~~~~~~-a~~~~---~~~~iia 103 (140)
T 3fwz_A 81 -NGYEAGEIVAS-ARAKN---PDIEIIA 103 (140)
T ss_dssp -CHHHHHHHHHH-HHHHC---SSSEEEE
T ss_pred -ChHHHHHHHHH-HHHHC---CCCeEEE
Confidence 23333334443 34455 4666554
No 350
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=77.19 E-value=11 Score=31.73 Aligned_cols=94 Identities=14% Similarity=0.082 Sum_probs=59.3
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCe-EEeeC-----CCCCC----C-C-cccee
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNL-DFLGG-----NMFEA----I-P-QANAV 176 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri-~~~~~-----d~~~~----~-~-~~D~v 176 (279)
..++.+||=+|+|. |.++..+++...--++++.|. ++-.+.+++..+.+ .+... |+.+. . + ++|++
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 56677888888765 888899998764334888887 76677666543333 32211 11110 1 2 48888
Q ss_pred eehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 177 LLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 177 ~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+-.- ..+ ..+..+.++|+ ++|+++++..
T Consensus 257 id~~-----g~~---~~~~~~~~~l~---~~G~iv~~G~ 284 (363)
T 3m6i_A 257 LECT-----GVE---SSIAAAIWAVK---FGGKVFVIGV 284 (363)
T ss_dssp EECS-----CCH---HHHHHHHHHSC---TTCEEEECCC
T ss_pred EECC-----CCh---HHHHHHHHHhc---CCCEEEEEcc
Confidence 7532 221 35777888899 7999998764
No 351
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=76.86 E-value=3.6 Score=35.07 Aligned_cols=93 Identities=13% Similarity=0.078 Sum_probs=57.7
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC--CCCCCC-CccceeeehhhhccC
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG--NMFEAI-PQANAVLLKWILHNW 185 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~--d~~~~~-~~~D~v~~~~vlh~~ 185 (279)
..+..+||-+|+|. |.++..+++.. ++++++.|. ++-.+.+++......+-.. |+.+.. .++|+++-.--
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g---- 266 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVA---- 266 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCS----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCC----
Confidence 56678999999875 88888888875 568888996 6666666653211111111 111111 35888875321
Q ss_pred ChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 186 NDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 186 ~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.+ ..++.+.+.|+ |+|+++++..
T Consensus 267 -~~---~~~~~~~~~l~---~~G~iv~~G~ 289 (369)
T 1uuf_A 267 -AP---HNLDDFTTLLK---RDGTMTLVGA 289 (369)
T ss_dssp -SC---CCHHHHHTTEE---EEEEEEECCC
T ss_pred -CH---HHHHHHHHHhc---cCCEEEEecc
Confidence 11 13566778888 7999887654
No 352
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=76.81 E-value=2.2 Score=37.36 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=27.0
Q ss_pred CCEEEEecCCccHHHHHHHHHCC-----CCeEEEeeChhH
Q 023625 114 LKSLVDVAGGTGIMARAIATAFP-----DIKCTVFDLPHV 148 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p-----~~~~~~~D~~~~ 148 (279)
..+|+|+|+|+|.++..+++... ..++++++..+.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~ 177 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGE 177 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHH
Confidence 46999999999999998876542 237899987433
No 353
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=76.43 E-value=6.5 Score=33.34 Aligned_cols=93 Identities=14% Similarity=0.108 Sum_probs=60.7
Q ss_pred hCCCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC--CCCCC----C-Cccceeeehh
Q 023625 111 FEGLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG--NMFEA----I-PQANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~--d~~~~----~-~~~D~v~~~~ 180 (279)
..+..+||-.| ||.|..+..+++.. ++++++.|. ++-.+.+++......+-.. |+.+. . .++|+++-.-
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence 45678999999 78899999999986 568999998 6666666654222111111 11100 1 2478887542
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.. ..++.+.++|+ ++|+++++...
T Consensus 240 -----g~----~~~~~~~~~l~---~~G~iv~~g~~ 263 (362)
T 2c0c_A 240 -----GG----AMFDLAVDALA---TKGRLIVIGFI 263 (362)
T ss_dssp -----CT----HHHHHHHHHEE---EEEEEEECCCG
T ss_pred -----CH----HHHHHHHHHHh---cCCEEEEEeCC
Confidence 11 35777888899 79999887654
No 354
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=76.28 E-value=3 Score=34.28 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=29.0
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCC----CeEEEeeC
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPD----IKCTVFDL 145 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~----~~~~~~D~ 145 (279)
++..|+=||||.|.....|.+.+|+ ++++++|.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDP 96 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDG 96 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcC
Confidence 3569999999999999999998876 58999996
No 355
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=76.23 E-value=7.7 Score=32.90 Aligned_cols=94 Identities=12% Similarity=0.074 Sum_probs=57.8
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC----CCCC----C-Cccceeeeh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN----MFEA----I-PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d----~~~~----~-~~~D~v~~~ 179 (279)
..+..+||-+|+|. |.++..+++...-.++++.|. ++-.+.+++......+-..+ +.+. . .++|+++-.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~ 267 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC 267 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEEC
Confidence 45677898898654 888888888764337899986 66667666532211111111 1110 0 147888753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCC-cEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEG-GKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pg-G~lli~e~ 215 (279)
- .. ...++.+.++|+ ++ |+++++..
T Consensus 268 ~-----g~---~~~~~~~~~~l~---~~~G~iv~~G~ 293 (373)
T 2fzw_A 268 I-----GN---VKVMRAALEACH---KGWGVSVVVGV 293 (373)
T ss_dssp S-----CC---HHHHHHHHHTBC---TTTCEEEECSC
T ss_pred C-----Cc---HHHHHHHHHhhc---cCCcEEEEEec
Confidence 2 11 235778888999 79 99987654
No 356
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=76.23 E-value=1.8 Score=36.49 Aligned_cols=92 Identities=10% Similarity=0.017 Sum_probs=58.3
Q ss_pred CCCEEEEecCCc-cHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccCCCCeEEe--e-CCCCCC--CC-ccceeeehhhhc
Q 023625 113 GLKSLVDVAGGT-GIMARAIATAF-PDIKCTVFDL-PHVVDNLQGTNDNLDFL--G-GNMFEA--IP-QANAVLLKWILH 183 (279)
Q Consensus 113 ~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~ri~~~--~-~d~~~~--~~-~~D~v~~~~vlh 183 (279)
+..+||-+|+|. |.++..+++.. |++++++.|. ++-.+.+++......+- . .|.... .+ ++|+++-.--
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g-- 247 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVG-- 247 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCC--
Confidence 678999999764 88888888875 4678999997 66667666532111111 1 111111 12 5888875421
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
. ...++.+.++|+ |+|+++++..
T Consensus 248 ---~---~~~~~~~~~~l~---~~G~iv~~g~ 270 (344)
T 2h6e_A 248 ---T---EETTYNLGKLLA---QEGAIILVGM 270 (344)
T ss_dssp ---C---HHHHHHHHHHEE---EEEEEEECCC
T ss_pred ---C---hHHHHHHHHHhh---cCCEEEEeCC
Confidence 1 135777888899 7999887654
No 357
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=75.15 E-value=12 Score=29.04 Aligned_cols=86 Identities=8% Similarity=0.110 Sum_probs=52.2
Q ss_pred EEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeeehhhhccC
Q 023625 116 SLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLLKWILHNW 185 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~~~vlh~~ 185 (279)
+|+=+|+ |.++..+++.. .+..++++|. ++.++..... ..+.++.+|..++ ..++|++++.-
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~----- 73 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-LKATIIHGDGSHKEILRDAEVSKNDVVVILT----- 73 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-SSSEEEESCTTSHHHHHHHTCCTTCEEEECC-----
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-cCCeEEEcCCCCHHHHHhcCcccCCEEEEec-----
Confidence 4556665 77777766654 3568999998 6666654322 3577889998763 23588888642
Q ss_pred ChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 186 NDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 186 ~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
+++....++....+.+. |..+++.
T Consensus 74 ~~d~~n~~~~~~a~~~~---~~~~iia 97 (218)
T 3l4b_C 74 PRDEVNLFIAQLVMKDF---GVKRVVS 97 (218)
T ss_dssp SCHHHHHHHHHHHHHTS---CCCEEEE
T ss_pred CCcHHHHHHHHHHHHHc---CCCeEEE
Confidence 34444445555555555 3455543
No 358
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=72.81 E-value=6.5 Score=32.86 Aligned_cols=41 Identities=22% Similarity=0.260 Sum_probs=34.5
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhccc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQG 154 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 154 (279)
.++..|||-=||+|..+.+..+. +-+++++|+ +..++.+++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~ 292 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAF 292 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHG
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHH
Confidence 56789999999999999988776 568999999 777777664
No 359
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=72.54 E-value=23 Score=25.49 Aligned_cols=89 Identities=16% Similarity=0.248 Sum_probs=51.2
Q ss_pred CCEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-h-hHHhhccc-CCCCeEEeeCCCCCC-------CCccceeeehhh
Q 023625 114 LKSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-P-HVVDNLQG-TNDNLDFLGGNMFEA-------IPQANAVLLKWI 181 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~-~~~~~a~~-~~~ri~~~~~d~~~~-------~~~~D~v~~~~v 181 (279)
..+|+=+|+ |..+..+++.. .+.+++++|. + +..+.... ....+.++.+|..++ ..++|+++..-
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~- 79 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS- 79 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS-
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec-
Confidence 356777765 67776666544 2467899987 4 32322221 124688999998753 23588887642
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
++++....+....+.+. |..+++.
T Consensus 80 ----~~d~~n~~~~~~a~~~~---~~~~ii~ 103 (153)
T 1id1_A 80 ----DNDADNAFVVLSAKDMS---SDVKTVL 103 (153)
T ss_dssp ----SCHHHHHHHHHHHHHHT---SSSCEEE
T ss_pred ----CChHHHHHHHHHHHHHC---CCCEEEE
Confidence 33333344444555555 3556554
No 360
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=72.20 E-value=16 Score=30.47 Aligned_cols=90 Identities=12% Similarity=0.158 Sum_probs=58.5
Q ss_pred hCCCCEEEEecCC-ccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-CC--------Cccceeeeh
Q 023625 111 FEGLKSLVDVAGG-TGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-AI--------PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~~--------~~~D~v~~~ 179 (279)
..+..+||-+|+| .|..+..+++.. +.++++.|. ++-.+.+++.... .++ |..+ +. .++|+++-.
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~-~~~--d~~~~~~~~~~~~~~~~~d~vid~ 237 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGAD-LVV--NPLKEDAAKFMKEKVGGVHAAVVT 237 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCS-EEE--CTTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCC-EEe--cCCCccHHHHHHHHhCCCCEEEEC
Confidence 4567889999864 688888888876 469999997 7667766654221 111 2221 11 247877653
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
. .. ...++.+.++|+ ++|+++++..
T Consensus 238 ~-----g~---~~~~~~~~~~l~---~~G~~v~~g~ 262 (339)
T 1rjw_A 238 A-----VS---KPAFQSAYNSIR---RGGACVLVGL 262 (339)
T ss_dssp S-----CC---HHHHHHHHHHEE---EEEEEEECCC
T ss_pred C-----CC---HHHHHHHHHHhh---cCCEEEEecc
Confidence 2 11 135677788899 7999887654
No 361
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=71.79 E-value=6.3 Score=33.18 Aligned_cols=95 Identities=14% Similarity=0.112 Sum_probs=59.6
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEe--eCCCCCC----C-C-ccceeeehh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFL--GGNMFEA----I-P-QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~--~~d~~~~----~-~-~~D~v~~~~ 180 (279)
..+..+||-+|+|. |.++..+++...-.++++.|. ++-.+.+++......+- ..|+.+. . . ++|+++-.-
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~ 243 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAG 243 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 46678888888765 888888888754337999998 66677777642221111 1122111 1 1 489887532
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
..+ ..+..+.+.|+ |+|+++++...
T Consensus 244 -----g~~---~~~~~~~~~l~---~~G~~v~~G~~ 268 (352)
T 3fpc_A 244 -----GDV---HTFAQAVKMIK---PGSDIGNVNYL 268 (352)
T ss_dssp -----SCT---THHHHHHHHEE---EEEEEEECCCC
T ss_pred -----CCh---HHHHHHHHHHh---cCCEEEEeccc
Confidence 111 34777788899 79999887643
No 362
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=71.71 E-value=5.7 Score=33.12 Aligned_cols=93 Identities=14% Similarity=0.076 Sum_probs=57.6
Q ss_pred hCCCCEEEEecC--CccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC---C----C-Cccceeeeh
Q 023625 111 FEGLKSLVDVAG--GTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE---A----I-PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~---~----~-~~~D~v~~~ 179 (279)
..+..+||-.|| |.|..+..+++.. ++++++.|. ++..+.+++......+-..+..+ . . .++|+++-.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 221 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDN 221 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence 456789999996 7788888888765 468999997 66666665442222221111010 0 0 247877653
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
. .. ..++.+.++|+ ++|+++++...
T Consensus 222 ~-----g~----~~~~~~~~~l~---~~G~~v~~g~~ 246 (333)
T 1v3u_A 222 V-----GG----EFLNTVLSQMK---DFGKIAICGAI 246 (333)
T ss_dssp S-----CH----HHHHHHHTTEE---EEEEEEECCCC
T ss_pred C-----Ch----HHHHHHHHHHh---cCCEEEEEecc
Confidence 2 22 23777888899 79999887643
No 363
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=71.50 E-value=30 Score=29.66 Aligned_cols=98 Identities=17% Similarity=0.029 Sum_probs=56.0
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEee--CCCCCC----C-C-ccceeeehh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLG--GNMFEA----I-P-QANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~--~d~~~~----~-~-~~D~v~~~~ 180 (279)
..+..+||=+|+|. |.++..+++...-.++++.|. ++-.+.+++......+-. .|+.+. . . ++|+++-.-
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECC
Confidence 45667888888654 888888888764348999997 777777775422211111 111110 1 1 488887532
Q ss_pred hhccCChh--HHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 181 ILHNWNDE--ESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 181 vlh~~~~~--~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
..+ ....+++.+.++++ ++|+++++...
T Consensus 291 -----g~~~~~~~~~~~~l~~~~~---~~G~iv~~G~~ 320 (404)
T 3ip1_A 291 -----GVPQLVWPQIEEVIWRARG---INATVAIVARA 320 (404)
T ss_dssp -----SCHHHHHHHHHHHHHHCSC---CCCEEEECSCC
T ss_pred -----CCcHHHHHHHHHHHHhccC---CCcEEEEeCCC
Confidence 122 11223333334458 79999987643
No 364
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=70.49 E-value=8.3 Score=32.36 Aligned_cols=90 Identities=12% Similarity=0.147 Sum_probs=58.1
Q ss_pred hCCCCEEEEecC--CccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC--CC---------Ccccee
Q 023625 111 FEGLKSLVDVAG--GTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE--AI---------PQANAV 176 (279)
Q Consensus 111 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~--~~---------~~~D~v 176 (279)
..+..+||-+|+ |.|..+..+++.. +.++++.|. ++..+.+++...... . |..+ .. .++|++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~~~~-~--d~~~~~~~~~~~~~~~~~~~D~v 242 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEVF-I--DFTKEKDIVGAVLKATDGGAHGV 242 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTCCEE-E--ETTTCSCHHHHHHHHHTSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCCceE-E--ecCccHhHHHHHHHHhCCCCCEE
Confidence 556789999997 5788888888875 468999986 665666655422211 1 3221 10 147777
Q ss_pred eehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 177 LLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 177 ~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+-..- . ...++.+.++|+ ++|+++++..
T Consensus 243 i~~~g-----~---~~~~~~~~~~l~---~~G~iv~~g~ 270 (347)
T 2hcy_A 243 INVSV-----S---EAAIEASTRYVR---ANGTTVLVGM 270 (347)
T ss_dssp EECSS-----C---HHHHHHHTTSEE---EEEEEEECCC
T ss_pred EECCC-----c---HHHHHHHHHHHh---cCCEEEEEeC
Confidence 65321 1 245788888999 7999887654
No 365
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=70.45 E-value=32 Score=28.55 Aligned_cols=95 Identities=13% Similarity=0.108 Sum_probs=58.6
Q ss_pred hCCCCEEEEecCC-ccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCC--C------CCCccceeeehh
Q 023625 111 FEGLKSLVDVAGG-TGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMF--E------AIPQANAVLLKW 180 (279)
Q Consensus 111 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~--~------~~~~~D~v~~~~ 180 (279)
..+..+||=.|+| .|.++..+++......+++.|. ++-.+.++++.....+-..+.. + ...++|+++-.-
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~ 237 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccccc
Confidence 4567788888865 4667778888776556788897 7777778776322222222211 0 012367665432
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.. ...++.+.++++ ++|+++++...
T Consensus 238 -----G~---~~~~~~~~~~l~---~~G~~v~~g~~ 262 (346)
T 4a2c_A 238 -----GV---PQTVELAVEIAG---PHAQLALVGTL 262 (346)
T ss_dssp -----CS---HHHHHHHHHHCC---TTCEEEECCCC
T ss_pred -----cc---cchhhhhhheec---CCeEEEEEecc
Confidence 11 245777888899 79999886644
No 366
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=68.84 E-value=7.9 Score=32.53 Aligned_cols=67 Identities=13% Similarity=0.165 Sum_probs=41.2
Q ss_pred CCEEEEecCCccHHHHHHHHHC----CCCeEEEeeC-hh-------HHh----hcccCCCCeEEeeCCCCCC-------C
Q 023625 114 LKSLVDVAGGTGIMARAIATAF----PDIKCTVFDL-PH-------VVD----NLQGTNDNLDFLGGNMFEA-------I 170 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~----p~~~~~~~D~-~~-------~~~----~a~~~~~ri~~~~~d~~~~-------~ 170 (279)
..+||=. ||+|.++.+++++. .+.+++++|. +. ..+ .......++.++.+|+.++ .
T Consensus 10 ~~~vlVT-GatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 88 (362)
T 3sxp_A 10 NQTILIT-GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK 88 (362)
T ss_dssp TCEEEEE-TTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence 3466655 56777777776654 5788999987 32 110 0111235789999999863 2
Q ss_pred Cccceeeehhh
Q 023625 171 PQANAVLLKWI 181 (279)
Q Consensus 171 ~~~D~v~~~~v 181 (279)
.+.|+|+-...
T Consensus 89 ~~~D~vih~A~ 99 (362)
T 3sxp_A 89 LHFDYLFHQAA 99 (362)
T ss_dssp SCCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 35788875543
No 367
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=66.72 E-value=5.8 Score=32.92 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=56.9
Q ss_pred hCCCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeChhHHhhcccCCCCeEEe--eCC-CCCCCCccceeeehhhhccC
Q 023625 111 FEGLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDLPHVVDNLQGTNDNLDFL--GGN-MFEAIPQANAVLLKWILHNW 185 (279)
Q Consensus 111 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ri~~~--~~d-~~~~~~~~D~v~~~~vlh~~ 185 (279)
..+..+||=+| ||.|.++..+++.. ++++++.+.+.-.+.+++......+- ..| +.+...++|+++-.-
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~----- 223 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLV----- 223 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESS-----
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECC-----
Confidence 56778899886 67789999999876 56888888755566666532211111 111 111224588887532
Q ss_pred ChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 186 NDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 186 ~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
..+ .+..+.++|+ ++|+++.+
T Consensus 224 g~~----~~~~~~~~l~---~~G~iv~~ 244 (321)
T 3tqh_A 224 GGD----VGIQSIDCLK---ETGCIVSV 244 (321)
T ss_dssp CHH----HHHHHGGGEE---EEEEEEEC
T ss_pred CcH----HHHHHHHhcc---CCCEEEEe
Confidence 222 2367788999 79999875
No 368
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=66.33 E-value=6.4 Score=33.04 Aligned_cols=122 Identities=11% Similarity=0.105 Sum_probs=70.4
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCe-EEEeeC-hhHHhhcccCCCCeEEeeCCCCC----CCCccceeeehhhhccCC-
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIK-CTVFDL-PHVVDNLQGTNDNLDFLGGNMFE----AIPQANAVLLKWILHNWN- 186 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~----~~~~~D~v~~~~vlh~~~- 186 (279)
..+++|+-||.|.++..+.++. .+ +..+|. +..++..+..-+... .+|+.+ ..+.+|+++..-....++
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ 86 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSI 86 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCT
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcch
Confidence 4689999999999999999874 44 566788 666555443101111 466654 134688888754444333
Q ss_pred --------hh--HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHH
Q 023625 187 --------DE--ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFL 256 (279)
Q Consensus 187 --------~~--~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~ 256 (279)
|+ ....-+-++.+.++ | +++++|.+..-... .+..+.+++.+.|+
T Consensus 87 ag~~~g~~d~r~~L~~~~~r~i~~~~---P--~~~~~ENV~gl~~~--------------------~~~~~~~~i~~~l~ 141 (327)
T 2c7p_A 87 SGKQKGFEDSRGTLFFDIARIVREKK---P--KVVFMENVKNFASH--------------------DNGNTLEVVKNTMN 141 (327)
T ss_dssp TSCCCGGGSTTSCHHHHHHHHHHHHC---C--SEEEEEEEGGGGTG--------------------GGGHHHHHHHHHHH
T ss_pred hcccCCCcchhhHHHHHHHHHHHhcc---C--cEEEEeCcHHHHhc--------------------cccHHHHHHHHHHH
Confidence 21 11112222334456 3 57888877431100 01124567888888
Q ss_pred HCCCceeE
Q 023625 257 AAGFSHYK 264 (279)
Q Consensus 257 ~aGf~~~~ 264 (279)
+.|+.+..
T Consensus 142 ~~GY~v~~ 149 (327)
T 2c7p_A 142 ELDYSFHA 149 (327)
T ss_dssp HTTBCCEE
T ss_pred hCCCEEEE
Confidence 89987543
No 369
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=64.55 E-value=13 Score=29.27 Aligned_cols=65 Identities=15% Similarity=0.063 Sum_probs=39.7
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC---hhHHhhcccCCCCeEEeeCCCCC-CCCccceeeeh
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL---PHVVDNLQGTNDNLDFLGGNMFE-AIPQANAVLLK 179 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~ri~~~~~d~~~-~~~~~D~v~~~ 179 (279)
.+++||=||||.=.....-.-.--++++++++. +...+.+. ..+++++.+++.. .+.++|+|+..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~--~~~i~~i~~~~~~~dL~~adLVIaA 98 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEA--KGQLRVKRKKVGEEDLLNVFFIVVA 98 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHH--TTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH--cCCcEEEECCCCHhHhCCCCEEEEC
Confidence 467899999986544432111112567777764 22222222 2578888888765 46679999874
No 370
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=64.27 E-value=3.8 Score=33.68 Aligned_cols=91 Identities=14% Similarity=0.088 Sum_probs=57.0
Q ss_pred hCCCCEEEEecC--CccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC---CCCCCCCccceeeehhhhcc
Q 023625 111 FEGLKSLVDVAG--GTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG---NMFEAIPQANAVLLKWILHN 184 (279)
Q Consensus 111 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~---d~~~~~~~~D~v~~~~vlh~ 184 (279)
..++.+||-+|+ |.|..+..+++.. ++++++.|. ++-.+.+++......+-.. |+.+...++|+++- --
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g--- 197 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VR--- 197 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CS---
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CC---
Confidence 456789999996 6788888888876 468999998 6666666554222111111 11111245888875 21
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
. ..++.+.++|+ ++|+++.+..
T Consensus 198 --~----~~~~~~~~~l~---~~G~~v~~g~ 219 (302)
T 1iz0_A 198 --G----KEVEESLGLLA---HGGRLVYIGA 219 (302)
T ss_dssp --C----TTHHHHHTTEE---EEEEEEEC--
T ss_pred --H----HHHHHHHHhhc---cCCEEEEEeC
Confidence 1 23677788899 7999887654
No 371
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=64.18 E-value=41 Score=24.85 Aligned_cols=87 Identities=8% Similarity=0.100 Sum_probs=49.3
Q ss_pred CCEEEEecCCccHHHHHHHHHC--C-CCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC--------CCccceeeehhh
Q 023625 114 LKSLVDVAGGTGIMARAIATAF--P-DIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA--------IPQANAVLLKWI 181 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~--p-~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~--------~~~~D~v~~~~v 181 (279)
..+|+=+|+| ..+..+++.. . +.+++++|. ++.++.++.. .+.++.+|..++ ..++|+++..--
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~--g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRSE--GRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT--TCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC--CCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 4578888864 4444444332 2 467999998 6666665543 456667776541 235888876321
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
+++....++. ..+.+. |+..++.
T Consensus 115 ----~~~~~~~~~~-~~~~~~---~~~~ii~ 137 (183)
T 3c85_A 115 ----HHQGNQTALE-QLQRRN---YKGQIAA 137 (183)
T ss_dssp ----SHHHHHHHHH-HHHHTT---CCSEEEE
T ss_pred ----ChHHHHHHHH-HHHHHC---CCCEEEE
Confidence 2333333343 445556 4666665
No 372
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=63.24 E-value=31 Score=27.81 Aligned_cols=77 Identities=21% Similarity=0.274 Sum_probs=46.0
Q ss_pred CEEEEecC-Cc-cHH-HHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHH
Q 023625 115 KSLVDVAG-GT-GIM-ARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEES 190 (279)
Q Consensus 115 ~~vlDvG~-G~-G~~-~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~ 190 (279)
.+|.=||+ |. |.. +..|++. +.+++++|. ++.++...+.. +.. .+..+....+|+|++. .+++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g--~~~--~~~~~~~~~aDvVi~a-----v~~~~~ 80 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGMG--IPL--TDGDGWIDEADVVVLA-----LPDNII 80 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHTT--CCC--CCSSGGGGTCSEEEEC-----SCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhcC--CCc--CCHHHHhcCCCEEEEc-----CCchHH
Confidence 47888887 64 332 2333332 458899998 66555554321 221 1222223468999874 355667
Q ss_pred HHHHHHHHHhCC
Q 023625 191 VKLLKKCKEAIP 202 (279)
Q Consensus 191 ~~~L~~~~~~L~ 202 (279)
..+++.+.+.++
T Consensus 81 ~~v~~~l~~~l~ 92 (286)
T 3c24_A 81 EKVAEDIVPRVR 92 (286)
T ss_dssp HHHHHHHGGGSC
T ss_pred HHHHHHHHHhCC
Confidence 788888888888
No 373
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=62.57 E-value=16 Score=30.32 Aligned_cols=92 Identities=8% Similarity=0.041 Sum_probs=59.5
Q ss_pred hCCCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC--CCCC----C-C-ccceeeeh
Q 023625 111 FEGLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN--MFEA----I-P-QANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d--~~~~----~-~-~~D~v~~~ 179 (279)
..+..+||-+| ||.|..+..+++.. ++++++.|. ++-.+.+++......+-..+ +.+. . + ++|+++-.
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence 45678999998 57788888888875 569999998 77777776653222221111 1110 1 1 48888753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.- . ..++.+.+.|+ ++|+++++..
T Consensus 225 ~g-----~----~~~~~~~~~l~---~~G~iv~~G~ 248 (334)
T 3qwb_A 225 VG-----K----DTFEISLAALK---RKGVFVSFGN 248 (334)
T ss_dssp CG-----G----GGHHHHHHHEE---EEEEEEECCC
T ss_pred CC-----h----HHHHHHHHHhc---cCCEEEEEcC
Confidence 32 1 24667778899 7999988754
No 374
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=62.44 E-value=2.1 Score=29.79 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=23.2
Q ss_pred CccccccCceeecCCCeEecChhcc-hhh
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPASR-LLL 28 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s~-~L~ 28 (279)
|+.|...|+++..+.+.|.+|+.|+ +|.
T Consensus 50 L~~Le~~GLV~~~~rg~Y~LT~~G~~~l~ 78 (111)
T 3b73_A 50 LKKLADHDLLQPLANGVYVITEEGEAYLN 78 (111)
T ss_dssp HHHHHHTTSEEECSTTCEEECHHHHHHHT
T ss_pred HHHHHHCCCEEecCCceEEECchHHHHHH
Confidence 4568899999988777899999997 553
No 375
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=62.42 E-value=23 Score=29.39 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=58.8
Q ss_pred hCCCCEEEEecC--CccHHHHHHHHHCCCCeEEEeeC-hhHHhhcc-cCCCCeEEeeC---CCCCC----C-Cccceeee
Q 023625 111 FEGLKSLVDVAG--GTGIMARAIATAFPDIKCTVFDL-PHVVDNLQ-GTNDNLDFLGG---NMFEA----I-PQANAVLL 178 (279)
Q Consensus 111 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-~~~~ri~~~~~---d~~~~----~-~~~D~v~~ 178 (279)
..+..+||-.|+ |.|..+..+++.. ++++++.|. ++-.+.++ +......+-.. ++.+. . .++|+++-
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~ 231 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFE 231 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence 456789999995 7888888888876 468999997 66666665 44222211111 11110 0 24787765
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.. .. ..++.+.++|+ ++|+++++...
T Consensus 232 ~~-----g~----~~~~~~~~~l~---~~G~~v~~G~~ 257 (345)
T 2j3h_A 232 NV-----GG----KMLDAVLVNMN---MHGRIAVCGMI 257 (345)
T ss_dssp SS-----CH----HHHHHHHTTEE---EEEEEEECCCG
T ss_pred CC-----CH----HHHHHHHHHHh---cCCEEEEEccc
Confidence 32 21 35778888999 79999887543
No 376
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=61.94 E-value=49 Score=29.29 Aligned_cols=124 Identities=16% Similarity=0.152 Sum_probs=65.7
Q ss_pred CCCEEEEec-CCccHHH-HHHHHHCCCCeEEEeeC--hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChh
Q 023625 113 GLKSLVDVA-GGTGIMA-RAIATAFPDIKCTVFDL--PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDE 188 (279)
Q Consensus 113 ~~~~vlDvG-~G~G~~~-~~l~~~~p~~~~~~~D~--~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~ 188 (279)
..++|+=|| ||+|.-+ ..++.+ -+.++++.|. +...+..+. ..+++..|.-.+.+.++|+|+.+-.+..-++
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~-~G~~V~~~D~~~~~~~~~l~~--~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p- 96 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLAN-EGYQISGSDLAPNSVTQHLTA--LGAQIYFHHRPENVLDASVVVVSTAISADNP- 96 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHH-TTCEEEEECSSCCHHHHHHHH--TTCEEESSCCGGGGTTCSEEEECTTSCTTCH-
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHh-CCCeEEEEECCCCHHHHHHHH--CCCEEECCCCHHHcCCCCEEEECCCCCCCCH-
Confidence 456888888 6778743 333333 3679999997 233333332 3566666632223456899988776542122
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhh--hcCCeeCCHHHHHHHHHHCCCc
Q 023625 189 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVS--LFRGKERSVDDWKKLFLAAGFS 261 (279)
Q Consensus 189 ~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~r~~~e~~~ll~~aGf~ 261 (279)
.+..+++. |.-++.+.-+ ............ .++||.-|..-+..+|+++|+.
T Consensus 97 ----~~~~a~~~-------gi~v~~~~e~----------l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~ 150 (494)
T 4hv4_A 97 ----EIVAAREA-------RIPVIRRAEM----------LAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGLD 150 (494)
T ss_dssp ----HHHHHHHT-------TCCEEEHHHH----------HHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTCC
T ss_pred ----HHHHHHHC-------CCCEEcHHHH----------HHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence 23333321 2223322110 000000111122 2358877888889999999985
No 377
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=61.90 E-value=8 Score=33.02 Aligned_cols=32 Identities=38% Similarity=0.452 Sum_probs=27.2
Q ss_pred CCEEEEecCCccHHHHH--HHHHCCCCeEEEeeC
Q 023625 114 LKSLVDVAGGTGIMARA--IATAFPDIKCTVFDL 145 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~ 145 (279)
+++|+=||+|.+.++.+ |.+..++.+++++|.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~ 35 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP 35 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC
Confidence 57899999999987665 777888899999985
No 378
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=61.89 E-value=16 Score=30.44 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=34.5
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-h---hHHhhccc
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-P---HVVDNLQG 154 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~---~~~~~a~~ 154 (279)
.++..|||-=||+|..+.+..+. +-+++++|+ + ..++.+++
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~ 285 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLT 285 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHH
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHH
Confidence 56789999999999999998887 568999999 6 67776653
No 379
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=61.74 E-value=42 Score=26.78 Aligned_cols=78 Identities=12% Similarity=0.005 Sum_probs=44.9
Q ss_pred EEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHHHH
Q 023625 116 SLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEESVK 192 (279)
Q Consensus 116 ~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~~~ 192 (279)
+|.=||+|. |. ++..+.+. +.+++++|. ++.++.+.+...... ...|..+- .++|+|++. .+++....
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~-~~~D~vi~a-----v~~~~~~~ 72 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDE-AGQDLSLL-QTAKIIFLC-----TPIQLILP 72 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSE-EESCGGGG-TTCSEEEEC-----SCHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCCCcc-ccCCHHHh-CCCCEEEEE-----CCHHHHHH
Confidence 566777654 22 22233332 347899998 666655543211111 12233223 568998885 35556778
Q ss_pred HHHHHHHhCC
Q 023625 193 LLKKCKEAIP 202 (279)
Q Consensus 193 ~L~~~~~~L~ 202 (279)
+++.+.+.++
T Consensus 73 ~~~~l~~~~~ 82 (279)
T 2f1k_A 73 TLEKLIPHLS 82 (279)
T ss_dssp HHHHHGGGSC
T ss_pred HHHHHHhhCC
Confidence 8888988888
No 380
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=61.65 E-value=18 Score=30.45 Aligned_cols=86 Identities=9% Similarity=0.145 Sum_probs=54.6
Q ss_pred CEEEEecCC-ccHHH-HHHH-HHCCCCe-EEEeeC-hh---HHhhcccCCCCeEEeeCCCCC-CC-------Cccceeee
Q 023625 115 KSLVDVAGG-TGIMA-RAIA-TAFPDIK-CTVFDL-PH---VVDNLQGTNDNLDFLGGNMFE-AI-------PQANAVLL 178 (279)
Q Consensus 115 ~~vlDvG~G-~G~~~-~~l~-~~~p~~~-~~~~D~-~~---~~~~a~~~~~ri~~~~~d~~~-~~-------~~~D~v~~ 178 (279)
.+||-+|+| .|.++ ..++ +.. +++ +++.|. ++ -.+.+++.. .+.+ |..+ +. .++|+++-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lG--a~~v--~~~~~~~~~i~~~~gg~Dvvid 248 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELD--ATYV--DSRQTPVEDVPDVYEQMDFIYE 248 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTT--CEEE--ETTTSCGGGHHHHSCCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcC--Cccc--CCCccCHHHHHHhCCCCCEEEE
Confidence 889999854 47788 8888 654 566 999998 55 567776542 2222 3222 11 14787764
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.- .. ...++.+.++++ ++|+++++...
T Consensus 249 ~~-----g~---~~~~~~~~~~l~---~~G~iv~~g~~ 275 (357)
T 2b5w_A 249 AT-----GF---PKHAIQSVQALA---PNGVGALLGVP 275 (357)
T ss_dssp CS-----CC---HHHHHHHHHHEE---EEEEEEECCCC
T ss_pred CC-----CC---hHHHHHHHHHHh---cCCEEEEEeCC
Confidence 32 21 134777888899 79999887643
No 381
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=61.62 E-value=28 Score=28.92 Aligned_cols=87 Identities=20% Similarity=0.213 Sum_probs=56.2
Q ss_pred CCCEEEEecCC-ccHHHHHHHHHCCCC-eEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-C----C----C-ccceeeeh
Q 023625 113 GLKSLVDVAGG-TGIMARAIATAFPDI-KCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-A----I----P-QANAVLLK 179 (279)
Q Consensus 113 ~~~~vlDvG~G-~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~----~----~-~~D~v~~~ 179 (279)
+..+||-+|+| .|..+..+++.. ++ ++++.|. ++-++.+++. .. .++ |..+ + . + ++|+++-.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~-~v~--~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-AD-RLV--NPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CS-EEE--CTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HH-hcc--CcCccCHHHHHHHhcCCCCCEEEEC
Confidence 67789999864 488888888876 55 8999997 6666766654 21 111 2111 1 0 2 47888753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
- .. ...++.+.++|+ ++|+++++..
T Consensus 239 ~-----g~---~~~~~~~~~~l~---~~G~iv~~g~ 263 (343)
T 2dq4_A 239 S-----GN---EAAIHQGLMALI---PGGEARILGI 263 (343)
T ss_dssp S-----CC---HHHHHHHHHHEE---EEEEEEECCC
T ss_pred C-----CC---HHHHHHHHHHHh---cCCEEEEEec
Confidence 2 11 234677888899 7999887654
No 382
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=61.19 E-value=19 Score=30.11 Aligned_cols=90 Identities=16% Similarity=0.166 Sum_probs=56.3
Q ss_pred CCCEEEEecCC-ccHHHHHHHHHCCCC-eEEEeeC-hhHHhhcccCCCCeEEeeC---CCCCC----C--Cccceeeehh
Q 023625 113 GLKSLVDVAGG-TGIMARAIATAFPDI-KCTVFDL-PHVVDNLQGTNDNLDFLGG---NMFEA----I--PQANAVLLKW 180 (279)
Q Consensus 113 ~~~~vlDvG~G-~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~ri~~~~~---d~~~~----~--~~~D~v~~~~ 180 (279)
+..+||-+|+| .|..+..+++.. ++ ++++.|. ++-.+.+++.... .++.. |+.+. . .++|+++-.-
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga~-~~~~~~~~~~~~~v~~~~~g~g~D~vid~~ 244 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGAD-YVINPFEEDVVKEVMDITDGNGVDVFLEFS 244 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTCS-EEECTTTSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCC-EEECCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 66789999875 488888888876 45 8999997 6666666653211 11111 11110 1 1488887542
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
- . ...++.+.+.|+ ++|+++.+..
T Consensus 245 g-----~---~~~~~~~~~~l~---~~G~iv~~g~ 268 (348)
T 2d8a_A 245 G-----A---PKALEQGLQAVT---PAGRVSLLGL 268 (348)
T ss_dssp C-----C---HHHHHHHHHHEE---EEEEEEECCC
T ss_pred C-----C---HHHHHHHHHHHh---cCCEEEEEcc
Confidence 1 1 235677788899 7999888764
No 383
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=61.12 E-value=25 Score=29.54 Aligned_cols=92 Identities=15% Similarity=0.092 Sum_probs=59.1
Q ss_pred hCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC---CCCC------CCccceeeeh
Q 023625 111 FEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN---MFEA------IPQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d---~~~~------~~~~D~v~~~ 179 (279)
..+..+||-+|+|. |..+..+++.. ++++++.|. ++-.+.+++..... ++..+ +.+. ..++|+++-.
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~-vi~~~~~~~~~~v~~~~~g~g~D~vid~ 264 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGADH-GINRLEEDWVERVYALTGDRGADHILEI 264 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCCE-EEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 45678999998665 88888888875 569999997 67777776542221 22211 1110 1158888754
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
-- . ..+..+.++|+ |+|+++++...
T Consensus 265 ~g-----~----~~~~~~~~~l~---~~G~iv~~G~~ 289 (363)
T 3uog_A 265 AG-----G----AGLGQSLKAVA---PDGRISVIGVL 289 (363)
T ss_dssp TT-----S----SCHHHHHHHEE---EEEEEEEECCC
T ss_pred CC-----h----HHHHHHHHHhh---cCCEEEEEecC
Confidence 32 1 23666778889 79999988654
No 384
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=61.01 E-value=14 Score=31.42 Aligned_cols=94 Identities=19% Similarity=0.144 Sum_probs=58.8
Q ss_pred hCCCCEEEEecCC-ccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC------CCCCC----CC--cccee
Q 023625 111 FEGLKSLVDVAGG-TGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG------NMFEA----IP--QANAV 176 (279)
Q Consensus 111 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~------d~~~~----~~--~~D~v 176 (279)
..+..+||-+|+| .|..+..+++...-.++++.|. ++-.+.+++.... .++.. |+.+. .+ ++|++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~v~~~~~g~g~Dvv 271 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD-LTLNRRETSVEERRKAIMDITHGRGADFI 271 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc-EEEeccccCcchHHHHHHHHhCCCCCcEE
Confidence 3456789999844 5888889998864358999997 7777777765222 12221 11110 11 48888
Q ss_pred eehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 177 LLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 177 ~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
+-.-- .+ ..++.+.++|+ ++|+++++...
T Consensus 272 id~~g-----~~---~~~~~~~~~l~---~~G~iv~~G~~ 300 (380)
T 1vj0_A 272 LEATG-----DS---RALLEGSELLR---RGGFYSVAGVA 300 (380)
T ss_dssp EECSS-----CT---THHHHHHHHEE---EEEEEEECCCC
T ss_pred EECCC-----CH---HHHHHHHHHHh---cCCEEEEEecC
Confidence 75321 11 24667778899 79999887543
No 385
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=60.79 E-value=16 Score=30.53 Aligned_cols=93 Identities=11% Similarity=0.130 Sum_probs=57.2
Q ss_pred hCCCCEEEEecCC--ccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC--CCCCC----C--Cccceeeeh
Q 023625 111 FEGLKSLVDVAGG--TGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG--NMFEA----I--PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~G--~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~--d~~~~----~--~~~D~v~~~ 179 (279)
..+..+||-+|+| .|..+..+++.. ++++++.|. ++-.+.+++......+-.. |+.+. . .++|+++-.
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 220 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDS 220 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence 5667899999876 788888888875 568999997 6666666653222222111 11110 1 148888753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
- ..+. +....++|+ ++|+++++...
T Consensus 221 ~-----g~~~----~~~~~~~l~---~~G~iv~~G~~ 245 (340)
T 3gms_A 221 I-----GGPD----GNELAFSLR---PNGHFLTIGLL 245 (340)
T ss_dssp S-----CHHH----HHHHHHTEE---EEEEEEECCCT
T ss_pred C-----CChh----HHHHHHHhc---CCCEEEEEeec
Confidence 2 2222 233447888 79999887653
No 386
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=60.56 E-value=13 Score=30.96 Aligned_cols=94 Identities=11% Similarity=0.031 Sum_probs=60.1
Q ss_pred hCCCCEEEEecC--CccHHHHHHHHHCCCCeEEEeeC-hhHHhhc-ccCCCCeEEeeCC--CCCC----CC-ccceeeeh
Q 023625 111 FEGLKSLVDVAG--GTGIMARAIATAFPDIKCTVFDL-PHVVDNL-QGTNDNLDFLGGN--MFEA----IP-QANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-~~~~~ri~~~~~d--~~~~----~~-~~D~v~~~ 179 (279)
..+..+||-.|+ |.|..+..+++.. ++++++.|. ++-.+.+ ++......+-..+ +.+. .+ ++|+++-.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence 566789999986 6788888888875 559999997 7667766 5542221121111 1110 11 47877653
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 217 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~ 217 (279)
. .. ..+..+.+.|+ ++|+++++....
T Consensus 226 ~-----g~----~~~~~~~~~l~---~~G~iv~~G~~~ 251 (336)
T 4b7c_A 226 V-----GG----EILDTVLTRIA---FKARIVLCGAIS 251 (336)
T ss_dssp S-----CH----HHHHHHHTTEE---EEEEEEECCCGG
T ss_pred C-----Cc----chHHHHHHHHh---hCCEEEEEeecc
Confidence 2 22 35778888999 799998876443
No 387
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=58.70 E-value=37 Score=27.50 Aligned_cols=86 Identities=13% Similarity=0.122 Sum_probs=47.9
Q ss_pred CEEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEee--------C---C---CCCCCCccceee
Q 023625 115 KSLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLG--------G---N---MFEAIPQANAVL 177 (279)
Q Consensus 115 ~~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~--------~---d---~~~~~~~~D~v~ 177 (279)
.+|.=||+|. |. ++..|++. +.+++++|. ++.++..++. .+.... . + ..+....+|+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKN--GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH--CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhC--CEEEEeCCCeeEecceeecchhhcccCCCCCEEE
Confidence 3688888764 22 22233332 457999998 6666554421 121111 0 1 111112689888
Q ss_pred ehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 178 LKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 178 ~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
+.- ++.....+++.+.+.++ |+..++.
T Consensus 80 ~~v-----~~~~~~~v~~~l~~~l~---~~~~iv~ 106 (316)
T 2ew2_A 80 ALT-----KAQQLDAMFKAIQPMIT---EKTYVLC 106 (316)
T ss_dssp ECS-----CHHHHHHHHHHHGGGCC---TTCEEEE
T ss_pred EEe-----ccccHHHHHHHHHHhcC---CCCEEEE
Confidence 743 45567788999999898 4554443
No 388
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=57.60 E-value=37 Score=27.14 Aligned_cols=95 Identities=11% Similarity=0.029 Sum_probs=52.7
Q ss_pred EEEecCCccHHHHHHHHHC---CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC------CCccceeeehhhhccCC
Q 023625 117 LVDVAGGTGIMARAIATAF---PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA------IPQANAVLLKWILHNWN 186 (279)
Q Consensus 117 vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~------~~~~D~v~~~~vlh~~~ 186 (279)
||=. ||+|.++..+++.. ++.++++++. +....... ..+++++.+|+.++ +.+.|+|+....... .
T Consensus 3 ilVt-GatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~-~ 78 (289)
T 3e48_A 3 IMLT-GATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--RGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIH-P 78 (289)
T ss_dssp EEEE-TTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--BTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCC-S
T ss_pred EEEE-cCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc-c
Confidence 4433 56677777666654 3678888887 43322221 36899999999873 235788876543221 1
Q ss_pred hhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 187 DEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 187 ~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
........+++.++++.. .-++++.+...
T Consensus 79 ~~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~ 107 (289)
T 3e48_A 79 SFKRIPEVENLVYAAKQS-GVAHIIFIGYY 107 (289)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCEEEEEEES
T ss_pred chhhHHHHHHHHHHHHHc-CCCEEEEEccc
Confidence 222233344555554421 12567766654
No 389
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=57.54 E-value=13 Score=30.88 Aligned_cols=93 Identities=14% Similarity=0.052 Sum_probs=58.9
Q ss_pred hCCCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC--CCCC----C--Cccceeeeh
Q 023625 111 FEGLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN--MFEA----I--PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d--~~~~----~--~~~D~v~~~ 179 (279)
..+..+||-.| ||.|..+..+++.. ++++++.|. ++-.+.+++......+-..+ +.+. . .++|+++-.
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence 45678999988 57788888888875 568999997 66677666542222221111 1110 1 148888753
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
. .. ..+..+.+.|+ ++|+++++...
T Consensus 217 ~-----g~----~~~~~~~~~l~---~~G~iv~~g~~ 241 (325)
T 3jyn_A 217 V-----GQ----DTWLTSLDSVA---PRGLVVSFGNA 241 (325)
T ss_dssp S-----CG----GGHHHHHTTEE---EEEEEEECCCT
T ss_pred C-----Ch----HHHHHHHHHhc---CCCEEEEEecC
Confidence 2 12 24667778899 79999987643
No 390
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=57.10 E-value=5.9 Score=32.76 Aligned_cols=88 Identities=8% Similarity=0.029 Sum_probs=55.0
Q ss_pred hCCCCEEEEecCC-ccHHHHHHHHHCCCCeEEEeeChhHHhhcccCCCCeEEeeCCCCCCCC-ccceeeehhhhccCChh
Q 023625 111 FEGLKSLVDVAGG-TGIMARAIATAFPDIKCTVFDLPHVVDNLQGTNDNLDFLGGNMFEAIP-QANAVLLKWILHNWNDE 188 (279)
Q Consensus 111 ~~~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~~~~~ 188 (279)
..+..+||=.|+| .|.++..+++.. ++++++.+.++-.+.+++... -.++ .| .+..+ ++|+++-.- ..+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~lGa-~~v~-~d-~~~v~~g~Dvv~d~~-----g~~ 210 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVSASLSQALAAKRGV-RHLY-RE-PSQVTQKYFAIFDAV-----NSQ 210 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSCCHHHHHHHTE-EEEE-SS-GGGCCSCEEEEECC---------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEEChhhHHHHHHcCC-CEEE-cC-HHHhCCCccEEEECC-----Cch
Confidence 5667899999875 488888998876 458988886555666665421 1112 24 22333 589887532 111
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 189 ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 189 ~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.+..+.++|+ |+|+++++.
T Consensus 211 ----~~~~~~~~l~---~~G~~v~~g 229 (315)
T 3goh_A 211 ----NAAALVPSLK---ANGHIICIQ 229 (315)
T ss_dssp -------TTGGGEE---EEEEEEEEC
T ss_pred ----hHHHHHHHhc---CCCEEEEEe
Confidence 1355678888 799998874
No 391
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=55.32 E-value=8.4 Score=33.87 Aligned_cols=90 Identities=14% Similarity=0.144 Sum_probs=62.8
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhH-------HhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccC
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHV-------VDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNW 185 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~-------~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~ 185 (279)
..++|.=||+|+=..+.++--+-.++.+++-=.+.. .+.|.+ +..++ +++.+..+.+|+|++ -.
T Consensus 36 kgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~--~Gf~v--~~~~eA~~~ADvV~~-----L~ 106 (491)
T 3ulk_A 36 QGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATE--NGFKV--GTYEELIPQADLVIN-----LT 106 (491)
T ss_dssp TTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHH--TTCEE--EEHHHHGGGCSEEEE-----CS
T ss_pred cCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHH--CCCEe--cCHHHHHHhCCEEEE-----eC
Confidence 468999999999998888888888888766544333 233333 33333 233333456899887 25
Q ss_pred ChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 186 NDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 186 ~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
||+.-..+.+++.+.|+ ||..|.+..
T Consensus 107 PD~~q~~vy~~I~p~lk---~G~~L~faH 132 (491)
T 3ulk_A 107 PDKQHSDVVRTVQPLMK---DGAALGYSH 132 (491)
T ss_dssp CGGGHHHHHHHHGGGSC---TTCEEEESS
T ss_pred ChhhHHHHHHHHHhhCC---CCCEEEecC
Confidence 88888889999999999 677666643
No 392
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=54.84 E-value=33 Score=28.71 Aligned_cols=91 Identities=16% Similarity=0.166 Sum_probs=56.9
Q ss_pred hCCCCEEEEecC--CccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC--CCCC------CCccceeeeh
Q 023625 111 FEGLKSLVDVAG--GTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN--MFEA------IPQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d--~~~~------~~~~D~v~~~ 179 (279)
..+..+||-.|+ |.|..+..+++.. ++++++.|. ++-.+.+++......+-..+ +.+. ..++|+++-.
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 246 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEM 246 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence 456789999985 7788888888875 568999997 66666666542221111111 1000 0147887754
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.- . ..+..+.++++ ++|+++++.
T Consensus 247 ~G-----~----~~~~~~~~~l~---~~G~iv~~g 269 (351)
T 1yb5_A 247 LA-----N----VNLSKDLSLLS---HGGRVIVVG 269 (351)
T ss_dssp CH-----H----HHHHHHHHHEE---EEEEEEECC
T ss_pred CC-----h----HHHHHHHHhcc---CCCEEEEEe
Confidence 22 1 24667788899 799998876
No 393
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=53.72 E-value=15 Score=30.68 Aligned_cols=50 Identities=20% Similarity=0.258 Sum_probs=37.3
Q ss_pred CCEEEEecCCccHHHHHHHHHCCC----CeEEEeeChhHHhhcccCCCCeEEeeC
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPD----IKCTVFDLPHVVDNLQGTNDNLDFLGG 164 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~----~~~~~~D~~~~~~~a~~~~~ri~~~~~ 164 (279)
+..||=+|++.|....-|.+.||+ ++++++|........++. .+|+++..
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~Le~~-~ni~li~~ 129 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGL-RDVTLVTR 129 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTC-TTEEEEEC
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhhhcCC-CcEEeehh
Confidence 359999999999999999998875 799999974433433443 46666554
No 394
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=52.59 E-value=73 Score=27.00 Aligned_cols=92 Identities=17% Similarity=0.192 Sum_probs=57.5
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC--hh-HH-hhccc--C-CCCeEEeeCCCCCCCC-ccceeeehhhhcc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL--PH-VV-DNLQG--T-NDNLDFLGGNMFEAIP-QANAVLLKWILHN 184 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~--~~-~~-~~a~~--~-~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~ 184 (279)
...+||.|+-+.|.++..++...| ..+.|. .. .+ .+.+. . .+++++... .++.+ .+|++++...
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~~---~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~lp--- 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHKP---YSIGDSYISELATRENLRLNGIDESSVKFLDS--TADYPQQPGVVLIKVP--- 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGCC---EEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TSCCCSSCSEEEEECC---
T ss_pred CCCCEEEECCCCCHHHHhhccCCc---eEEEhHHHHHHHHHHHHHHcCCCccceEeccc--ccccccCCCEEEEEcC---
Confidence 446899999999999999876533 233564 11 11 11111 1 123555433 33333 6999887432
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
-+.......|.++...|+ ||+.|++...
T Consensus 110 k~~~~l~~~L~~l~~~l~---~~~~i~~~g~ 137 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVT---SDTRIIAGAK 137 (375)
T ss_dssp SCHHHHHHHHHHHHTTCC---TTSEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhCC---CCCEEEEEec
Confidence 134567788999999999 7898877664
No 395
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=52.35 E-value=46 Score=29.40 Aligned_cols=95 Identities=19% Similarity=0.213 Sum_probs=54.5
Q ss_pred CEEEEecCCc-c-HHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCC-----------------CeEEeeCCCCCCCCccc
Q 023625 115 KSLVDVAGGT-G-IMARAIATAFPDIKCTVFDL-PHVVDNLQGTND-----------------NLDFLGGNMFEAIPQAN 174 (279)
Q Consensus 115 ~~vlDvG~G~-G-~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-----------------ri~~~~~d~~~~~~~~D 174 (279)
.+|.=||+|. | .++..|+++.++.+++++|. ++.++..++... ++.+. .|..+....+|
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t-~~~~~~~~~aD 88 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFS-SDIPKAIAEAD 88 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEE-SCHHHHHHHCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEE-CCHHHHhhcCC
Confidence 4788899885 3 34556667666778999998 776666553111 12211 11111122478
Q ss_pred eeeehh--hhcc--------CChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 175 AVLLKW--ILHN--------WNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 175 ~v~~~~--vlh~--------~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+|++.- ..+. ..-.....+++.+.+.++ + |.++|..
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~---~-g~iVV~~ 134 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAG---G-PKIVVEK 134 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCC---S-CEEEEEC
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCC---C-CCEEEEC
Confidence 888762 2221 111236678888999998 3 5565543
No 396
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=52.07 E-value=19 Score=30.55 Aligned_cols=93 Identities=12% Similarity=0.026 Sum_probs=55.8
Q ss_pred hCCCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeChhHHhhcccCCCCeEEeeC--CCCC---CCCccceeeehhhhc
Q 023625 111 FEGLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDLPHVVDNLQGTNDNLDFLGG--NMFE---AIPQANAVLLKWILH 183 (279)
Q Consensus 111 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ri~~~~~--d~~~---~~~~~D~v~~~~vlh 183 (279)
..+..+||=.| ||.|..+..+++.. ++++++.+.++-.+.+++......+-.. |+.+ ...++|+++-.-
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~--- 256 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNV--- 256 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESS---
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECC---
Confidence 34567899998 67888999999876 4688888766556666554222111111 1111 113588887532
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
..+ ...+....++++ ++|+++.+.
T Consensus 257 --g~~--~~~~~~~~~~l~---~~G~iv~~g 280 (375)
T 2vn8_A 257 --GGS--TETWAPDFLKKW---SGATYVTLV 280 (375)
T ss_dssp --CTT--HHHHGGGGBCSS---SCCEEEESC
T ss_pred --CCh--hhhhHHHHHhhc---CCcEEEEeC
Confidence 111 123456667788 799998765
No 397
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=51.94 E-value=75 Score=24.01 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=53.9
Q ss_pred EEEEecCCccHHHHHHHHHCC--CCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCC-C------CCccceeeehhhhcc-
Q 023625 116 SLVDVAGGTGIMARAIATAFP--DIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-A------IPQANAVLLKWILHN- 184 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~------~~~~D~v~~~~vlh~- 184 (279)
+||=. ||+|..+.+++++.- +.++++++. +... ... .+++++.+|+.+ + ..+.|+|+.......
T Consensus 2 ~ilIt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~ 76 (219)
T 3dqp_A 2 KIFIV-GSTGRVGKSLLKSLSTTDYQIYAGARKVEQV---PQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK 76 (219)
T ss_dssp EEEEE-STTSHHHHHHHHHHTTSSCEEEEEESSGGGS---CCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS
T ss_pred eEEEE-CCCCHHHHHHHHHHHHCCCEEEEEECCccch---hhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCC
Confidence 45534 577888888888763 468899987 4322 222 689999999987 3 235788876543221
Q ss_pred ----CChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 185 ----WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 185 ----~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.+-.-...+++.+.+. + .++++.+...
T Consensus 77 ~~~~~n~~~~~~l~~a~~~~-~----~~~iv~~SS~ 107 (219)
T 3dqp_A 77 SLLKVDLYGAVKLMQAAEKA-E----VKRFILLSTI 107 (219)
T ss_dssp SCCCCCCHHHHHHHHHHHHT-T----CCEEEEECCT
T ss_pred CcEeEeHHHHHHHHHHHHHh-C----CCEEEEECcc
Confidence 1122234455554332 2 3577766654
No 398
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=50.58 E-value=26 Score=29.37 Aligned_cols=92 Identities=13% Similarity=0.043 Sum_probs=56.3
Q ss_pred hCCCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC--CCCC----C--Cccceeeeh
Q 023625 111 FEGLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN--MFEA----I--PQANAVLLK 179 (279)
Q Consensus 111 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d--~~~~----~--~~~D~v~~~ 179 (279)
+.+..+||-.| ||.|..+..+++.. ++++++.|. ++-++.+++......+-..+ +.+. . .++|+++-.
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 238 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDC 238 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence 45678999998 57788888888875 568999997 66666665432221111111 1000 1 147887653
Q ss_pred hhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 180 WILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 180 ~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.- .+ .+..+.++|+ ++|+++++..
T Consensus 239 ~G-----~~----~~~~~~~~l~---~~G~iv~~G~ 262 (354)
T 2j8z_A 239 IG-----GS----YWEKNVNCLA---LDGRWVLYGL 262 (354)
T ss_dssp SC-----GG----GHHHHHHHEE---EEEEEEECCC
T ss_pred CC-----ch----HHHHHHHhcc---CCCEEEEEec
Confidence 31 21 3566778888 7999988764
No 399
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=50.57 E-value=91 Score=24.59 Aligned_cols=93 Identities=12% Similarity=0.150 Sum_probs=50.1
Q ss_pred ecCCccHHHHHHHHHC----CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC------CCccceeeehhhhccCChh
Q 023625 120 VAGGTGIMARAIATAF----PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA------IPQANAVLLKWILHNWNDE 188 (279)
Q Consensus 120 vG~G~G~~~~~l~~~~----p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~------~~~~D~v~~~~vlh~~~~~ 188 (279)
|=||+|..+.+++++. |+.++++++. +....... ..+++++.+|+.++ ..+.|+|+.....+ ..++
T Consensus 5 VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~--~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~-~~~~ 81 (287)
T 2jl1_A 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA--DQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH-YDNT 81 (287)
T ss_dssp ETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH--HTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC-SCHH
T ss_pred EEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh--hcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC-cCch
Confidence 3367888888887754 2567888887 33222111 14688999999863 23578887544332 2221
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 189 ESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 189 ~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.......++.++++.. .-++++.+...
T Consensus 82 ~n~~~~~~l~~a~~~~-~~~~~v~~Ss~ 108 (287)
T 2jl1_A 82 LLIVQHANVVKAARDA-GVKHIAYTGYA 108 (287)
T ss_dssp HHHHHHHHHHHHHHHT-TCSEEEEEEET
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEECCC
Confidence 1222333343433310 12467666543
No 400
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=50.45 E-value=29 Score=30.34 Aligned_cols=92 Identities=10% Similarity=0.006 Sum_probs=57.3
Q ss_pred hCCCCEEEEecC--CccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEE--eeCCCC-----------------C
Q 023625 111 FEGLKSLVDVAG--GTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDF--LGGNMF-----------------E 168 (279)
Q Consensus 111 ~~~~~~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~--~~~d~~-----------------~ 168 (279)
..+..+||=+|+ |.|.++..+++.. ++++++.+. +.-++.+++......+ ...|+. +
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~ 304 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGK 304 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHH
Confidence 456788998884 6788999999876 568887776 6667766653211111 111111 0
Q ss_pred ------CCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 169 ------AIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 169 ------~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.-.++|+++-.- .. ..+..+.++++ ++|+++++-.
T Consensus 305 ~i~~~t~g~g~Dvvid~~-----G~----~~~~~~~~~l~---~~G~iv~~G~ 345 (456)
T 3krt_A 305 RIRELTGGEDIDIVFEHP-----GR----ETFGASVFVTR---KGGTITTCAS 345 (456)
T ss_dssp HHHHHHTSCCEEEEEECS-----CH----HHHHHHHHHEE---EEEEEEESCC
T ss_pred HHHHHhCCCCCcEEEEcC-----Cc----hhHHHHHHHhh---CCcEEEEEec
Confidence 012578777532 11 35777788899 7999987653
No 401
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=49.71 E-value=15 Score=30.38 Aligned_cols=91 Identities=11% Similarity=0.085 Sum_probs=54.6
Q ss_pred CCCC-EEEEecC--CccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCC----CCCC--Cccceeeehhh
Q 023625 112 EGLK-SLVDVAG--GTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNM----FEAI--PQANAVLLKWI 181 (279)
Q Consensus 112 ~~~~-~vlDvG~--G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~----~~~~--~~~D~v~~~~v 181 (279)
.+.. +||-.|+ |.|..+..+++.. ++++++.+. ++-.+.+++......+-..+. .... .++|+++-.-
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~- 224 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPV- 224 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECS-
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECC-
Confidence 3443 7998984 7888999999886 468888887 566666665421111111111 1111 2488877532
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
..+ .+..+.+.++ ++|+++++..
T Consensus 225 ----g~~----~~~~~~~~l~---~~G~~v~~G~ 247 (328)
T 1xa0_A 225 ----GGR----TLATVLSRMR---YGGAVAVSGL 247 (328)
T ss_dssp ----TTT----THHHHHHTEE---EEEEEEECSC
T ss_pred ----cHH----HHHHHHHhhc---cCCEEEEEee
Confidence 111 3666778888 7999988754
No 402
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=49.57 E-value=58 Score=26.89 Aligned_cols=85 Identities=13% Similarity=0.118 Sum_probs=52.7
Q ss_pred CCEEEEecCCccHHHHHHHHHCC--CCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeeehhhhc
Q 023625 114 LKSLVDVAGGTGIMARAIATAFP--DIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLLKWILH 183 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~~~vlh 183 (279)
..+|+=+|+ |..+..+++..- +. ++++|. ++.++ .+. ..+.++.||..++ ..++|.++...
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~--- 185 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL--- 185 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--TTCEEEESCTTSHHHHHHTCSTTEEEEEECC---
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--CCcEEEEeCCCCHHHHHhcChhhccEEEEcC---
Confidence 347888776 677777777652 34 888898 66666 553 4688999998763 23588877642
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
-+|+.... .-...+.+. |..+++.
T Consensus 186 -~~d~~n~~-~~~~ar~~~---~~~~iia 209 (336)
T 1lnq_A 186 -ESDSETIH-CILGIRKID---ESVRIIA 209 (336)
T ss_dssp -SSHHHHHH-HHHHHHTTC---TTSEEEE
T ss_pred -CccHHHHH-HHHHHHHHC---CCCeEEE
Confidence 12333333 334445566 4556554
No 403
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=49.49 E-value=93 Score=24.39 Aligned_cols=100 Identities=11% Similarity=0.124 Sum_probs=57.3
Q ss_pred CCEEEEecCC----ccH-HHHHHHHHCCCCeEEEeeC-hhHHhhcc----cC-CCCeEEeeCCCCCCC------------
Q 023625 114 LKSLVDVAGG----TGI-MARAIATAFPDIKCTVFDL-PHVVDNLQ----GT-NDNLDFLGGNMFEAI------------ 170 (279)
Q Consensus 114 ~~~vlDvG~G----~G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~----~~-~~ri~~~~~d~~~~~------------ 170 (279)
.+++|=.|++ .|. ++..|+++ +.++++.+. +...+... .. ..++.++..|+.++.
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 4577777765 232 34444444 567888876 32222222 22 237999999998741
Q ss_pred -Cccceeeehhh----------hccCChhHHH-----------HHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 171 -PQANAVLLKWI----------LHNWNDEESV-----------KLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 171 -~~~D~v~~~~v----------lh~~~~~~~~-----------~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
+..|+++...- +...+.++.. .+++.+.+.|+ ++|+|+.+.....
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~g~iv~isS~~~ 151 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT---EGGSIVTLTYLGG 151 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT---TCEEEEEEECGGG
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCceEEEEecccc
Confidence 13576665432 2233444332 35667778887 5788888776543
No 404
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=49.39 E-value=87 Score=24.05 Aligned_cols=93 Identities=17% Similarity=0.253 Sum_probs=51.5
Q ss_pred CEEEEecCCccHHHHHHHHHCC--C-CeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC------CCccceeeehhhhcc
Q 023625 115 KSLVDVAGGTGIMARAIATAFP--D-IKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA------IPQANAVLLKWILHN 184 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p--~-~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~------~~~~D~v~~~~vlh~ 184 (279)
++|| |=||+|..+.++++++- + .++++++. +...... ...+++++.+|+.++ +.+.|+++.....
T Consensus 24 k~vl-VtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~-- 98 (236)
T 3qvo_A 24 KNVL-ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--YPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG-- 98 (236)
T ss_dssp EEEE-EETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--CCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS--
T ss_pred cEEE-EEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--ccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC--
Confidence 3455 44667777777777653 3 57888887 4332221 235899999999873 1357888754322
Q ss_pred CChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 185 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
.......+++.++++.. ..++|+.+...
T Consensus 99 ---~~~~~~~~~~~~~~~~~-~~~~iV~iSS~ 126 (236)
T 3qvo_A 99 ---EDLDIQANSVIAAMKAC-DVKRLIFVLSL 126 (236)
T ss_dssp ---TTHHHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred ---CchhHHHHHHHHHHHHc-CCCEEEEEecc
Confidence 11112233444444321 13677766653
No 405
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=48.91 E-value=49 Score=27.12 Aligned_cols=99 Identities=12% Similarity=0.196 Sum_probs=51.8
Q ss_pred EEEEecCCc-cHHHHHHHHHCCCC-eEEEeeChh-HHh-hccc-------CCCCeEEeeCCCCCCCCccceeeehhhhcc
Q 023625 116 SLVDVAGGT-GIMARAIATAFPDI-KCTVFDLPH-VVD-NLQG-------TNDNLDFLGGNMFEAIPQANAVLLKWILHN 184 (279)
Q Consensus 116 ~vlDvG~G~-G~~~~~l~~~~p~~-~~~~~D~~~-~~~-~a~~-------~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~ 184 (279)
+|.=||+|. |.....++...+-+ ..+.+|+.+ ..+ .|.. ..........+-.+...++|+|++..-.-.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~pr 81 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLAR 81 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCCC
Confidence 455667532 44333333333443 689999843 221 1111 122334443322334557898887554332
Q ss_pred CC---hh----HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 185 WN---DE----ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 185 ~~---~~----~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
-+ .. ...++++.+.+.+....|++.++++.
T Consensus 82 kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs 118 (294)
T 2x0j_A 82 KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 22 21 24567777777775555789888765
No 406
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=48.24 E-value=1.2e+02 Score=27.11 Aligned_cols=125 Identities=11% Similarity=0.069 Sum_probs=66.0
Q ss_pred CCEEEEec-CCccHHHHHHHHHCCCCeEEEeeCh---hHHhhcccCCCCeEEeeCCCCCCC-CccceeeehhhhccCChh
Q 023625 114 LKSLVDVA-GGTGIMARAIATAFPDIKCTVFDLP---HVVDNLQGTNDNLDFLGGNMFEAI-PQANAVLLKWILHNWNDE 188 (279)
Q Consensus 114 ~~~vlDvG-~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~a~~~~~ri~~~~~d~~~~~-~~~D~v~~~~vlh~~~~~ 188 (279)
.++|.=|| ||+|.-+.+..-+.-+.++++.|.. +..+..++ ..+++..|.-.+.. .++|+|+.+-.+.. ..+
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~--~gi~~~~G~~~~~~~~~~d~vV~Spgi~~-~~p 95 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQ--AGVTIEEGYLIAHLQPAPDLVVVGNAMKR-GMD 95 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHH--TTCEEEESCCGGGGCSCCSEEEECTTCCT-TSH
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHH--CCCEEECCCCHHHcCCCCCEEEECCCcCC-CCH
Confidence 46777777 6777654333222347899999972 23333332 35677766332233 35899988776632 112
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhh-hcchhhhh--hcCCeeCCHHHHHHHHHHCCCce
Q 023625 189 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQL-CFDILMVS--LFRGKERSVDDWKKLFLAAGFSH 262 (279)
Q Consensus 189 ~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~-~~d~~~~~--~~~~~~r~~~e~~~ll~~aGf~~ 262 (279)
.++++.+. |.-++.+.-+ .... ..+..... .++||.-|..-+..+|+++|++.
T Consensus 96 ----~l~~a~~~-------gi~v~~~~e~----------l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G~~~ 151 (524)
T 3hn7_A 96 ----VIEYMLDT-------GLRYTSGPQF----------LSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAGIDA 151 (524)
T ss_dssp ----HHHHHHHH-------TCCEEEHHHH----------HHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTTCCC
T ss_pred ----HHHHHHHC-------CCcEEEHHHH----------HHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcCCCc
Confidence 23333321 2223333110 0000 01111222 34588777788889999999864
No 407
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=47.93 E-value=55 Score=28.65 Aligned_cols=93 Identities=15% Similarity=0.178 Sum_probs=49.3
Q ss_pred EEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccC------------------CCCeEEeeCCCCCCCCccc
Q 023625 116 SLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGT------------------NDNLDFLGGNMFEAIPQAN 174 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~------------------~~ri~~~~~d~~~~~~~~D 174 (279)
+|.=||+|. ++..++..+ -+.+++++|. ++.++..++. ..++.+. .|..+....+|
T Consensus 4 kI~VIG~G~--vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea~~~aD 80 (450)
T 3gg2_A 4 DIAVVGIGY--VGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQAVPEAD 80 (450)
T ss_dssp EEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHHGGGCS
T ss_pred EEEEECcCH--HHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHHHhcCC
Confidence 677777653 333333322 2468999999 6666554321 1223322 22211133578
Q ss_pred eeeehhhhcc-----CChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 175 AVLLKWILHN-----WNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 175 ~v~~~~vlh~-----~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+|++.---.. ..-....++++.+.+.++ + |.++|...
T Consensus 81 vViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~---~-g~iVV~~S 122 (450)
T 3gg2_A 81 IIFIAVGTPAGEDGSADMSYVLDAARSIGRAMS---R-YILIVTKS 122 (450)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCC---S-CEEEEECS
T ss_pred EEEEEcCCCcccCCCcChHHHHHHHHHHHhhCC---C-CCEEEEee
Confidence 8887431110 000156788899999998 3 56666554
No 408
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=47.66 E-value=58 Score=21.52 Aligned_cols=63 Identities=16% Similarity=0.081 Sum_probs=39.7
Q ss_pred CCEEEEecCCccHHHHHHHH---HCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC------CCccceeeehh
Q 023625 114 LKSLVDVAGGTGIMARAIAT---AFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA------IPQANAVLLKW 180 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~---~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~------~~~~D~v~~~~ 180 (279)
..+|+=+|+ |..+..+++ +....+++++|. +...+.... .++.+...|+.++ ..++|+++..-
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR--MGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT--TTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh--CCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 357888887 555554444 333367899998 655555442 4677788887652 23578877654
No 409
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=47.13 E-value=1.1e+02 Score=25.10 Aligned_cols=66 Identities=15% Similarity=0.146 Sum_probs=39.0
Q ss_pred CCCEEEEecCCccH--HHHHHHHHCCCCeEEEeeC-hhHHhhccc----CCCCeEEeeCCCCCCCCccceeeehh
Q 023625 113 GLKSLVDVAGGTGI--MARAIATAFPDIKCTVFDL-PHVVDNLQG----TNDNLDFLGGNMFEAIPQANAVLLKW 180 (279)
Q Consensus 113 ~~~~vlDvG~G~G~--~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~ri~~~~~d~~~~~~~~D~v~~~~ 180 (279)
+..+|.=||+|+.. ++..++.+..-..++.+|+ ++....+.. ..+++... .|+ +...++|+|+..-
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~d~-~~l~~aD~Vi~aa 85 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-KDL-SASAHSKVVIFTV 85 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-SCG-GGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-CCH-HHHCCCCEEEEcC
Confidence 34689999998633 5556666554347999998 432222221 12466653 665 5567899998864
No 410
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=46.87 E-value=56 Score=28.82 Aligned_cols=96 Identities=15% Similarity=0.177 Sum_probs=52.5
Q ss_pred CCCEEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hhHHhhcccCC------------------CCeEEeeCCCCCCCC
Q 023625 113 GLKSLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PHVVDNLQGTN------------------DNLDFLGGNMFEAIP 171 (279)
Q Consensus 113 ~~~~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~------------------~ri~~~~~d~~~~~~ 171 (279)
+..+|.=||+|. |. ++..|+++ +.+++++|. ++.++..++.. .++.+. .|..+...
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHHHhh
Confidence 456888898885 33 23344443 457999998 77676655321 122221 11111122
Q ss_pred ccceeeehhhh-----ccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 172 QANAVLLKWIL-----HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 172 ~~D~v~~~~vl-----h~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.+|+|++.--- ....-....++++.+.+.++ | |.+++...
T Consensus 84 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~---~-~~iVV~~S 128 (478)
T 2y0c_A 84 HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMT---G-FKVIVDKS 128 (478)
T ss_dssp HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCC---S-CEEEEECS
T ss_pred cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcC---C-CCEEEEeC
Confidence 47888874211 00011566788888999998 4 45555543
No 411
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=46.02 E-value=37 Score=27.83 Aligned_cols=87 Identities=17% Similarity=0.168 Sum_probs=55.7
Q ss_pred EEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCC--CCCC--CccceeeehhhhccCChh
Q 023625 116 SLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNM--FEAI--PQANAVLLKWILHNWNDE 188 (279)
Q Consensus 116 ~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~--~~~~--~~~D~v~~~~vlh~~~~~ 188 (279)
+||=.| ||.|.++..+++.. ++++++.+. ++-.+.+++......+-..+. .... .++|+++-.- ..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~-----g~- 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTV-----GD- 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESS-----CH-
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECC-----Cc-
Confidence 488887 47899999999976 569999996 766776665322211211121 1111 2588776421 22
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 189 ESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 189 ~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
..+..+.++|+ |+|+++++..
T Consensus 222 ---~~~~~~~~~l~---~~G~iv~~G~ 242 (324)
T 3nx4_A 222 ---KVLAKVLAQMN---YGGCVAACGL 242 (324)
T ss_dssp ---HHHHHHHHTEE---EEEEEEECCC
T ss_pred ---HHHHHHHHHHh---cCCEEEEEec
Confidence 26788888999 7999988753
No 412
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=46.00 E-value=1.6e+02 Score=26.01 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=55.5
Q ss_pred CCCCEEEEecCCccHHHH--HHHHHCCCC-eEEEeeC-hh----HHhhcccC--------------------CCCeEEee
Q 023625 112 EGLKSLVDVAGGTGIMAR--AIATAFPDI-KCTVFDL-PH----VVDNLQGT--------------------NDNLDFLG 163 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~--~l~~~~p~~-~~~~~D~-~~----~~~~a~~~--------------------~~ri~~~~ 163 (279)
.+..+|.=||.|.=.... .|++ .|+. +++++|. ++ .++..++. ..++.+.
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~-~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~t- 93 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFAD-APCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECT- 93 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHH-STTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEE-
T ss_pred CCCCEEEEECcCHHHHHHHHHHHH-hCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEe-
Confidence 345688889887643333 3333 3466 8999999 66 55544321 1334332
Q ss_pred CCCCCCCCccceeeehhhhcc-------CChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 164 GNMFEAIPQANAVLLKWILHN-------WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 164 ~d~~~~~~~~D~v~~~~vlh~-------~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
.| .+...++|+|++.-.-.. ..-.......+.+.+.++ || .++|.+.-.+
T Consensus 94 td-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~---~g-~iVV~~STv~ 150 (478)
T 3g79_A 94 PD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLK---PG-MLVVLESTIT 150 (478)
T ss_dssp SC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCC---TT-CEEEECSCCC
T ss_pred Cc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcC---CC-cEEEEeCCCC
Confidence 22 223346898887532111 111235677788999998 44 4555554433
No 413
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=44.10 E-value=1.2e+02 Score=24.84 Aligned_cols=76 Identities=13% Similarity=0.128 Sum_probs=43.7
Q ss_pred CEEEEecCCccHHHHHHHHHC--CC-CeEEEeeC-h-------hHHhhcccCCCCeEEeeC-CCCCCCCccceeeehhhh
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PD-IKCTVFDL-P-------HVVDNLQGTNDNLDFLGG-NMFEAIPQANAVLLKWIL 182 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~-~~~~~~D~-~-------~~~~~a~~~~~ri~~~~~-d~~~~~~~~D~v~~~~vl 182 (279)
.+|.=||+| ..+..+++.. .+ .+++++|. + ...+...+. .+ .. +..+-..++|+|++.
T Consensus 25 m~IgvIG~G--~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~--g~---~~~s~~e~~~~aDvVi~a--- 94 (317)
T 4ezb_A 25 TTIAFIGFG--EAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL--GV---EPLDDVAGIACADVVLSL--- 94 (317)
T ss_dssp CEEEEECCS--HHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT--TC---EEESSGGGGGGCSEEEEC---
T ss_pred CeEEEECcc--HHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC--CC---CCCCHHHHHhcCCEEEEe---
Confidence 478888865 3333333322 24 68999998 4 233333322 22 22 332223458988874
Q ss_pred ccCChhHHHHHHHHHHHhCC
Q 023625 183 HNWNDEESVKLLKKCKEAIP 202 (279)
Q Consensus 183 h~~~~~~~~~~L~~~~~~L~ 202 (279)
.+++...+.++.+.+.++
T Consensus 95 --vp~~~~~~~~~~i~~~l~ 112 (317)
T 4ezb_A 95 --VVGAATKAVAASAAPHLS 112 (317)
T ss_dssp --CCGGGHHHHHHHHGGGCC
T ss_pred --cCCHHHHHHHHHHHhhcC
Confidence 355556677788888888
No 414
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=43.90 E-value=1.1e+02 Score=23.45 Aligned_cols=133 Identities=11% Similarity=0.078 Sum_probs=69.3
Q ss_pred CCEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCe-EEeeCCCCCC----CCccceeeehhhhccC
Q 023625 114 LKSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNL-DFLGGNMFEA----IPQANAVLLKWILHNW 185 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri-~~~~~d~~~~----~~~~D~v~~~~vlh~~ 185 (279)
..+||=. ||+|..+.++++++ .+.++++++. +...+.... .++ +++.+|+.+. +.+.|+++........
T Consensus 21 ~~~ilVt-GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~~ 97 (236)
T 3e8x_A 21 GMRVLVV-GANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--RGASDIVVANLEEDFSHAFASIDAVVFAAGSGPH 97 (236)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--TTCSEEEECCTTSCCGGGGTTCSEEEECCCCCTT
T ss_pred CCeEEEE-CCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--CCCceEEEcccHHHHHHHHcCCCEEEECCCCCCC
Confidence 4567655 45666666666654 3568999988 444433332 367 8899998732 2357888765433221
Q ss_pred Ch-h--------HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHH
Q 023625 186 ND-E--------ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFL 256 (279)
Q Consensus 186 ~~-~--------~~~~~L~~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~ 256 (279)
.+ + ....+++.+.+. + .++++.+........... . .....+ ..++...+++++
T Consensus 98 ~~~~~~~~~n~~~~~~l~~a~~~~-~----~~~iv~~SS~~~~~~~~~---~--~~~~~Y--------~~sK~~~e~~~~ 159 (236)
T 3e8x_A 98 TGADKTILIDLWGAIKTIQEAEKR-G----IKRFIMVSSVGTVDPDQG---P--MNMRHY--------LVAKRLADDELK 159 (236)
T ss_dssp SCHHHHHHTTTHHHHHHHHHHHHH-T----CCEEEEECCTTCSCGGGS---C--GGGHHH--------HHHHHHHHHHHH
T ss_pred CCccccchhhHHHHHHHHHHHHHc-C----CCEEEEEecCCCCCCCCC---h--hhhhhH--------HHHHHHHHHHHH
Confidence 11 1 123344444332 2 367777665322211000 0 000000 114455667778
Q ss_pred HCCCceeEEEe
Q 023625 257 AAGFSHYKITP 267 (279)
Q Consensus 257 ~aGf~~~~~~~ 267 (279)
+.|+...-+++
T Consensus 160 ~~gi~~~~lrp 170 (236)
T 3e8x_A 160 RSSLDYTIVRP 170 (236)
T ss_dssp HSSSEEEEEEE
T ss_pred HCCCCEEEEeC
Confidence 88988776655
No 415
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=43.21 E-value=74 Score=26.03 Aligned_cols=66 Identities=20% Similarity=0.276 Sum_probs=40.6
Q ss_pred CCEEEEecCCccHHHHHHHHHC--CCCeEEEeeChhHHhhcccCCCCeEEeeCCCCCC--C----CccceeeehhhhccC
Q 023625 114 LKSLVDVAGGTGIMARAIATAF--PDIKCTVFDLPHVVDNLQGTNDNLDFLGGNMFEA--I----PQANAVLLKWILHNW 185 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~~--~----~~~D~v~~~~vlh~~ 185 (279)
.++||=. ||+|.++.++++++ .+.++++++.... ..+++++.+|+.++ + .+.|+|+-......+
T Consensus 19 ~~~vlVt-GatG~iG~~l~~~L~~~G~~V~~~~r~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~ 90 (347)
T 4id9_A 19 SHMILVT-GSAGRVGRAVVAALRTQGRTVRGFDLRPS-------GTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSW 90 (347)
T ss_dssp --CEEEE-TTTSHHHHHHHHHHHHTTCCEEEEESSCC-------SSCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCS
T ss_pred CCEEEEE-CCCChHHHHHHHHHHhCCCEEEEEeCCCC-------CCCccEEecCcCCHHHHHHHHhCCCEEEECCcccCc
Confidence 3456655 56787777777654 2467888886321 15788899999763 1 257888765544333
Q ss_pred Ch
Q 023625 186 ND 187 (279)
Q Consensus 186 ~~ 187 (279)
..
T Consensus 91 ~~ 92 (347)
T 4id9_A 91 AP 92 (347)
T ss_dssp SG
T ss_pred ch
Confidence 33
No 416
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=42.85 E-value=79 Score=21.70 Aligned_cols=61 Identities=15% Similarity=0.144 Sum_probs=36.5
Q ss_pred CEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeeeh
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLLK 179 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~~ 179 (279)
.+|+=+|+ |..+..+++.. .+.+++++|. +...+.++.. ...+..+|..++ ..++|+++..
T Consensus 7 ~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 7 KQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY--ATHAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT--CSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--CCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 46888886 55555555433 2457888888 5555554432 345666776542 1257887764
No 417
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=42.79 E-value=1.1e+02 Score=25.91 Aligned_cols=90 Identities=17% Similarity=0.191 Sum_probs=47.8
Q ss_pred CCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeChhHHhhccc-CCCCeEEeeCCCCCCCCccceeeehhhhccCChhH
Q 023625 112 EGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDLPHVVDNLQG-TNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEE 189 (279)
Q Consensus 112 ~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~ 189 (279)
..+++|+--|+|+ |......+...++.-..++|..+. ...+- .+.++.++.-+.... ...|.|++..-- -
T Consensus 317 ~~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~-k~g~~~~g~~ipi~~p~~~~~-~~~d~vl~~~~~------~ 388 (416)
T 4e2x_A 317 AEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPD-KQNRLTPGAHIPVRPASAFSD-PYPDYALLFAWN------H 388 (416)
T ss_dssp HTTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGG-GTTEECTTTCCEEEEGGGCCS-SCCSEEEESCGG------G
T ss_pred HcCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCcc-ccCccCCCCCCcCCCHHHHhh-cCCCEEEEecch------h
Confidence 4567898888776 344444444444433345565222 11111 234677777665542 235655543211 1
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEE
Q 023625 190 SVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 190 ~~~~L~~~~~~L~~~~pgG~lli 212 (279)
..+|++++..... -||++++
T Consensus 389 ~~ei~~~~~~~~~---~g~~~~~ 408 (416)
T 4e2x_A 389 AEEIMAKEQEFHQ---AGGRWIL 408 (416)
T ss_dssp HHHHHHHCHHHHH---TTCEEEE
T ss_pred HHHHHHHHHHHHh---cCCEEEE
Confidence 3466777766666 5899876
No 418
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=42.76 E-value=19 Score=30.08 Aligned_cols=89 Identities=16% Similarity=0.256 Sum_probs=55.3
Q ss_pred CCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeC-CCCCC-----CCccceeeehhhhc
Q 023625 113 GLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGG-NMFEA-----IPQANAVLLKWILH 183 (279)
Q Consensus 113 ~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~-d~~~~-----~~~~D~v~~~~vlh 183 (279)
+..+||=+| ||.|..+..+++.. ++++++.|. ++-.+.+++......+-.. |+.+. ..++|+++-..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~--- 225 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTF--- 225 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESS---
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECC---
Confidence 567888884 56688888888875 569999998 7777777653211111111 11110 12488877532
Q ss_pred cCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 184 NWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 184 ~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.. ...+..+.++|+ ++|+++.+
T Consensus 226 --g~---~~~~~~~~~~l~---~~G~iv~~ 247 (346)
T 3fbg_A 226 --NT---DMYYDDMIQLVK---PRGHIATI 247 (346)
T ss_dssp --CH---HHHHHHHHHHEE---EEEEEEES
T ss_pred --Cc---hHHHHHHHHHhc---cCCEEEEE
Confidence 22 245677788899 79998765
No 419
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=42.36 E-value=16 Score=30.02 Aligned_cols=20 Identities=15% Similarity=0.486 Sum_probs=16.5
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 023625 191 VKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 191 ~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
..+++++.++|+ |||.+++.
T Consensus 77 ~~~~~~~~rvLk---~~G~l~i~ 96 (297)
T 2zig_A 77 DRVWREVFRLLV---PGGRLVIV 96 (297)
T ss_dssp HHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHHcC---CCcEEEEE
Confidence 467889999999 79988764
No 420
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=41.97 E-value=46 Score=27.28 Aligned_cols=69 Identities=6% Similarity=-0.054 Sum_probs=45.9
Q ss_pred CCCCEEEEecCCccHHHHHHHHHCCCCe-EEEeeC-hhHHhhcccCCCCeEEeeCCCCC-C---C---Cccceeeehh
Q 023625 112 EGLKSLVDVAGGTGIMARAIATAFPDIK-CTVFDL-PHVVDNLQGTNDNLDFLGGNMFE-A---I---PQANAVLLKW 180 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~-~---~---~~~D~v~~~~ 180 (279)
....+++|+=||.|.++..+.++.-..+ +...|. +..++.-+..-+...+..+|+.+ . + +.+|+++..-
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ggp 91 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGS 91 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEecC
Confidence 4556899999999999999998754443 578888 55555433222344567778765 1 1 2478887643
No 421
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=41.96 E-value=18 Score=31.74 Aligned_cols=65 Identities=9% Similarity=0.171 Sum_probs=37.5
Q ss_pred CEEEEecCCccHHHHH----HHHHCCC---CeEEEeeC-h--hHHhhc----c----cCCCCeEEee-CCCCCCCCccce
Q 023625 115 KSLVDVAGGTGIMARA----IATAFPD---IKCTVFDL-P--HVVDNL----Q----GTNDNLDFLG-GNMFEAIPQANA 175 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~----l~~~~p~---~~~~~~D~-~--~~~~~a----~----~~~~ri~~~~-~d~~~~~~~~D~ 175 (279)
.+|.=||+|+. ++.+ |++.++. -+++.+|+ + +.++.. . ......++.. .|..+...++|+
T Consensus 8 ~KIaVIGaGsv-~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 8 LKIATIGGGSS-YTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp EEEEEETTTCT-THHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CEEEEECCCHH-HHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 58999999997 3433 5543333 36899999 5 433321 1 1223445543 454344557888
Q ss_pred eeehh
Q 023625 176 VLLKW 180 (279)
Q Consensus 176 v~~~~ 180 (279)
|++.-
T Consensus 87 VVita 91 (450)
T 1s6y_A 87 VTTQF 91 (450)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 88753
No 422
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=41.78 E-value=85 Score=24.72 Aligned_cols=79 Identities=16% Similarity=0.275 Sum_probs=45.3
Q ss_pred CEEEEecCCc-cH-HHHHHHHHCCCCe-EEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHH
Q 023625 115 KSLVDVAGGT-GI-MARAIATAFPDIK-CTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEES 190 (279)
Q Consensus 115 ~~vlDvG~G~-G~-~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~ 190 (279)
.+|.=||+|. |. ++..+.+. +.+ ++++|. ++..+...+. -++.. ..|..+....+|+|++.- +++..
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~Dvvi~av-----~~~~~ 81 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQK-VEAEY-TTDLAEVNPYAKLYIVSL-----KDSAF 81 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHH-TTCEE-ESCGGGSCSCCSEEEECC-----CHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHH-cCCce-eCCHHHHhcCCCEEEEec-----CHHHH
Confidence 4688888863 32 23334443 345 788898 5555544321 12332 223323334689998853 45556
Q ss_pred HHHHHHHHHhCC
Q 023625 191 VKLLKKCKEAIP 202 (279)
Q Consensus 191 ~~~L~~~~~~L~ 202 (279)
..+++.+.+.++
T Consensus 82 ~~v~~~l~~~~~ 93 (266)
T 3d1l_A 82 AELLQGIVEGKR 93 (266)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHhhcC
Confidence 778888888887
No 423
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=41.62 E-value=64 Score=27.92 Aligned_cols=92 Identities=11% Similarity=-0.015 Sum_probs=57.3
Q ss_pred hCCCCEEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEe--eCCCCC-----------------
Q 023625 111 FEGLKSLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFL--GGNMFE----------------- 168 (279)
Q Consensus 111 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~--~~d~~~----------------- 168 (279)
..++.+||=.| ||.|..+..+++.. ++++++.+. ++-.+.+++......+- ..|+.+
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLA 296 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHH
Confidence 45678999888 46788888888875 568888776 66666666542221111 112210
Q ss_pred ------CCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 169 ------AIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 169 ------~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.-.++|+++-.- .. ..++.+.+.++ ++|+++++..
T Consensus 297 ~~v~~~~g~g~Dvvid~~-----G~----~~~~~~~~~l~---~~G~iv~~G~ 337 (447)
T 4a0s_A 297 KLVVEKAGREPDIVFEHT-----GR----VTFGLSVIVAR---RGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHSSCCSEEEECS-----CH----HHHHHHHHHSC---TTCEEEESCC
T ss_pred HHHHHHhCCCceEEEECC-----Cc----hHHHHHHHHHh---cCCEEEEEec
Confidence 012478777532 22 24677778899 7999988653
No 424
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=41.24 E-value=1.2e+02 Score=24.26 Aligned_cols=55 Identities=11% Similarity=0.065 Sum_probs=33.2
Q ss_pred CCEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhc----cc-CCCCeEEeeCCCCCC
Q 023625 114 LKSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNL----QG-TNDNLDFLGGNMFEA 169 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a----~~-~~~ri~~~~~d~~~~ 169 (279)
.+++|=.|++ |.++.++++++ .+.++++.+. +...+.+ +. ...++.++..|+.++
T Consensus 12 ~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 12 RRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74 (311)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSC
T ss_pred CcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCc
Confidence 4567766655 44555554443 3578888887 4333222 12 235899999999775
No 425
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=41.16 E-value=54 Score=27.09 Aligned_cols=66 Identities=9% Similarity=0.175 Sum_probs=32.6
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCC--eEEEeeCh-hHHhh-cc----c--CCCCeEEeeCCCCCCCCccceeeehh
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDI--KCTVFDLP-HVVDN-LQ----G--TNDNLDFLGGNMFEAIPQANAVLLKW 180 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~-~~~~~-a~----~--~~~ri~~~~~d~~~~~~~~D~v~~~~ 180 (279)
..+|.=||+|.=..+.++.-...+. +++++|+. +.++. +. . ...++++..+| .+...++|+|++.-
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~-~~a~~~aDvVii~~ 82 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-YSDVKDCDVIVVTA 82 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-GGGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECC-HHHhCCCCEEEEcC
Confidence 3578888875433322222222233 79999983 22221 11 1 11345555444 33456799998754
No 426
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=40.48 E-value=26 Score=30.27 Aligned_cols=31 Identities=32% Similarity=0.546 Sum_probs=25.5
Q ss_pred CEEEEecCCccHHHH--HHHHHCCCCeEEEeeC
Q 023625 115 KSLVDVAGGTGIMAR--AIATAFPDIKCTVFDL 145 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~--~l~~~~p~~~~~~~D~ 145 (279)
++||=||+|.|.++. .|.+..|+.+++++|.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 479999999997655 4677788899999985
No 427
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=40.20 E-value=25 Score=30.06 Aligned_cols=87 Identities=13% Similarity=0.064 Sum_probs=53.4
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCeEEE-eeC-hhHHhhcccCCCCeEEeeCCCCCCCC-ccceeeehhhhccCCh---
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIKCTV-FDL-PHVVDNLQGTNDNLDFLGGNMFEAIP-QANAVLLKWILHNWND--- 187 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~-~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~-~~D~v~~~~vlh~~~~--- 187 (279)
..+||.++-+-|.++..+. |..+++. .|. +......+.. -...+ .+-.++.+ .||+|++. ||.
T Consensus 46 ~~~~l~~n~~~g~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~-~~~~~--~~~~~~~~~~~d~v~~~-----~Pk~k~ 114 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLE---GRMAVERLETSRAAFRCLTASG-LQARL--ALPWEAAAGAYDLVVLA-----LPAGRG 114 (381)
T ss_dssp SSEEEESSCTTSTTTGGGB---TTBEEEEEECBHHHHHHHHHTT-CCCEE--CCGGGSCTTCEEEEEEE-----CCGGGC
T ss_pred CCcEEEecCCCCccccccC---CCCceEEEeCcHHHHHHHHHcC-CCccc--cCCccCCcCCCCEEEEE-----CCcchh
Confidence 4689999999999887664 2344444 465 4333322211 12222 11122233 59998874 453
Q ss_pred -hHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 188 -EESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 188 -~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
..+...|.++.+.|+ |||.|++..
T Consensus 115 ~~~~~~~l~~~~~~l~---~g~~i~~~g 139 (381)
T 3dmg_A 115 TAYVQASLVAAARALR---MGGRLYLAG 139 (381)
T ss_dssp HHHHHHHHHHHHHHEE---EEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCC---CCCEEEEEE
Confidence 346788999999999 799988876
No 428
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=40.04 E-value=38 Score=28.23 Aligned_cols=64 Identities=14% Similarity=0.360 Sum_probs=42.3
Q ss_pred CCEEEEecCCccHHHHHHHHHC---CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCC-CC--C----Cccceeeeh
Q 023625 114 LKSLVDVAGGTGIMARAIATAF---PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMF-EA--I----PQANAVLLK 179 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~-~~--~----~~~D~v~~~ 179 (279)
..+||=. ||+|.++..++++. ++.++++++. +........ ..+++++.+|+. ++ . .+.|+|+-.
T Consensus 24 ~~~vlVt-GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~ 98 (372)
T 3slg_A 24 AKKVLIL-GVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-HERMHFFEGDITINKEWVEYHVKKCDVILPL 98 (372)
T ss_dssp CCEEEEE-SCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-STTEEEEECCTTTCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEE-CCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-CCCeEEEeCccCCCHHHHHHHhccCCEEEEc
Confidence 3567755 57788777777655 4678999998 433333322 268999999998 52 1 147888753
No 429
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=39.42 E-value=57 Score=27.49 Aligned_cols=87 Identities=13% Similarity=0.198 Sum_probs=49.5
Q ss_pred CCEEEEecCCcc--HHHHHHHHHCCCCeEEEeeC-hhHHhhcccC------------CCCeEEeeCCCCCCCCccceeee
Q 023625 114 LKSLVDVAGGTG--IMARAIATAFPDIKCTVFDL-PHVVDNLQGT------------NDNLDFLGGNMFEAIPQANAVLL 178 (279)
Q Consensus 114 ~~~vlDvG~G~G--~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------~~ri~~~~~d~~~~~~~~D~v~~ 178 (279)
..+|.=||+|.= .++..|++. +.++++.|. ++.++..++. .+++.+. .|..+...++|+|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea~~~aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKASLEGVTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHHHTTCCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHHHhcCCEEEE
Confidence 357888887642 223333332 457889998 6665544321 1122221 122111235898887
Q ss_pred hhhhccCChhHHHHHHHHHHHhCCCCCCCcEEE
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIPSKDEGGKVI 211 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~ll 211 (279)
. .+......+++++.+.++ |+..++
T Consensus 106 a-----Vp~~~~~~vl~~i~~~l~---~~~ivv 130 (356)
T 3k96_A 106 V-----VPSFAFHEVITRMKPLID---AKTRIA 130 (356)
T ss_dssp C-----CCHHHHHHHHHHHGGGCC---TTCEEE
T ss_pred C-----CCHHHHHHHHHHHHHhcC---CCCEEE
Confidence 4 366677889999999998 455443
No 430
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=39.38 E-value=87 Score=25.99 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=56.7
Q ss_pred hCCC--CEEEEecC--CccHHHHHHHHHCCCC-eEEEeeC-hhHHhhccc-CCCCeEEeeCCCCC-C--------CC-cc
Q 023625 111 FEGL--KSLVDVAG--GTGIMARAIATAFPDI-KCTVFDL-PHVVDNLQG-TNDNLDFLGGNMFE-A--------IP-QA 173 (279)
Q Consensus 111 ~~~~--~~vlDvG~--G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~-~~~ri~~~~~d~~~-~--------~~-~~ 173 (279)
..+. .+||-.|+ |.|..+..+++.. ++ ++++.|. ++-.+.+++ ......+ |..+ + .. ++
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~ 231 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFDAAI---NYKKDNVAEQLRESCPAGV 231 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCSEEE---ETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCceEE---ecCchHHHHHHHHhcCCCC
Confidence 4556 89999985 6778888888775 56 8999998 555555543 3221111 2211 1 01 47
Q ss_pred ceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 174 NAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 174 D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
|+++-.. .. ..++.+.++|+ ++|+++++...
T Consensus 232 d~vi~~~-----G~----~~~~~~~~~l~---~~G~iv~~G~~ 262 (357)
T 2zb4_A 232 DVYFDNV-----GG----NISDTVISQMN---ENSHIILCGQI 262 (357)
T ss_dssp EEEEESC-----CH----HHHHHHHHTEE---EEEEEEECCCG
T ss_pred CEEEECC-----CH----HHHHHHHHHhc---cCcEEEEECCc
Confidence 7776532 21 45778888999 79999887643
No 431
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=39.16 E-value=81 Score=26.79 Aligned_cols=33 Identities=12% Similarity=0.134 Sum_probs=22.4
Q ss_pred ccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 172 QANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 172 ~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.+|+|++.- +......+++.+.+.++ |+. +++.
T Consensus 82 ~aD~Vilav-----~~~~~~~v~~~l~~~l~---~~~-ivv~ 114 (404)
T 3c7a_A 82 GADVVILTV-----PAFAHEGYFQAMAPYVQ---DSA-LIVG 114 (404)
T ss_dssp TCSEEEECS-----CGGGHHHHHHHHTTTCC---TTC-EEEE
T ss_pred CCCEEEEeC-----chHHHHHHHHHHHhhCC---CCc-EEEE
Confidence 589888743 44445678899988888 454 4443
No 432
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=38.53 E-value=16 Score=32.48 Aligned_cols=123 Identities=11% Similarity=0.164 Sum_probs=70.1
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCe-EEEeeC-hhHHhhcccC---CCCeEEeeCCCCC-C------------------
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIK-CTVFDL-PHVVDNLQGT---NDNLDFLGGNMFE-A------------------ 169 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~~---~~ri~~~~~d~~~-~------------------ 169 (279)
.-+++|+=||.|.++..+.++. .+ +...|. +..++.-+.. .+...+..+|+.+ .
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG--~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG--GQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT--EEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 3589999999999999998763 33 566787 5555443321 1334556677643 1
Q ss_pred -CCccceeeehhhhccCChh-----------------HHHHHHHH---HHHhCCCCCCCcEEEEEeeecCCCCCCchhhh
Q 023625 170 -IPQANAVLLKWILHNWNDE-----------------ESVKLLKK---CKEAIPSKDEGGKVIIIDMAIENQSQDKESME 228 (279)
Q Consensus 170 -~~~~D~v~~~~vlh~~~~~-----------------~~~~~L~~---~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~ 228 (279)
.+.+|+++.......++-. ..-.++.+ +.+.++ | +++++|.+..=...
T Consensus 166 ~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~r---P--k~fvlENV~gl~s~------ 234 (482)
T 3me5_A 166 HIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARR---P--AMFVLENVKNLKSH------ 234 (482)
T ss_dssp HSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHC---C--SEEEEEEETTTTTG------
T ss_pred cCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcC---C--cEEEEeCcHHHhcc------
Confidence 2457888776554444421 10112332 333345 3 57888877532110
Q ss_pred hhhhcchhhhhhcCCeeCCHHHHHHHHHHCCCcee
Q 023625 229 TQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHY 263 (279)
Q Consensus 229 ~~~~~d~~~~~~~~~~~r~~~e~~~ll~~aGf~~~ 263 (279)
.+..+...+.+.|++.|+.+.
T Consensus 235 --------------~~g~~f~~i~~~L~~lGY~v~ 255 (482)
T 3me5_A 235 --------------DKGKTFRIIMQTLDELGYDVA 255 (482)
T ss_dssp --------------GGGHHHHHHHHHHHHTTEEET
T ss_pred --------------cCCcHHHHHHHHHhcCCcEEE
Confidence 011245678888899998764
No 433
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=38.42 E-value=6.6 Score=26.29 Aligned_cols=25 Identities=24% Similarity=0.429 Sum_probs=21.2
Q ss_pred ccccccCceeecCCCeEecChhcchh
Q 023625 2 RILVHSGFFAQQKDDEYFLTPASRLL 27 (279)
Q Consensus 2 r~L~~~g~l~~~~~~~y~~t~~s~~L 27 (279)
+.|...|++++..+ .|.+|+.|..+
T Consensus 42 ~~L~~~GLI~~~~~-~~~LT~kG~~~ 66 (95)
T 1r7j_A 42 KMLMDLEIIRQEGK-QYMLTKKGEEL 66 (95)
T ss_dssp HHHHHTTSEEEETT-EEEECHHHHHH
T ss_pred HHHHHCCCeEEECC-eeEEChhHHHH
Confidence 56889999999875 89999999744
No 434
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=38.04 E-value=31 Score=28.91 Aligned_cols=90 Identities=17% Similarity=0.154 Sum_probs=53.0
Q ss_pred CCCEEEEecCC-ccHHHHHHHHHCCCCeEEEeeC-hhHHhhcc-cCC-CCeEEeeCCC--CCC-CCccceeeehhhhccC
Q 023625 113 GLKSLVDVAGG-TGIMARAIATAFPDIKCTVFDL-PHVVDNLQ-GTN-DNLDFLGGNM--FEA-IPQANAVLLKWILHNW 185 (279)
Q Consensus 113 ~~~~vlDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-~~~-~ri~~~~~d~--~~~-~~~~D~v~~~~vlh~~ 185 (279)
+..+||-+|+| .|.++..+++.. ++++++.|. ++-.+.++ +.. +.+ +-..+. ... ..++|+++-.---
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~g~D~vid~~g~--- 254 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKMSELADSLDYVIDTVPV--- 254 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHHHHSTTTEEEEEECCCS---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHHHHhcCCCCEEEECCCC---
Confidence 66788888854 477888888875 468999997 55566555 432 221 111110 001 1258888753211
Q ss_pred ChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 186 NDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 186 ~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
+ ..++.+.++++ |+|+++++..
T Consensus 255 -~----~~~~~~~~~l~---~~G~iv~~G~ 276 (357)
T 2cf5_A 255 -H----HALEPYLSLLK---LDGKLILMGV 276 (357)
T ss_dssp -C----CCSHHHHTTEE---EEEEEEECSC
T ss_pred -h----HHHHHHHHHhc---cCCEEEEeCC
Confidence 1 12455667888 7999988654
No 435
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=37.95 E-value=84 Score=26.42 Aligned_cols=102 Identities=11% Similarity=0.111 Sum_probs=55.0
Q ss_pred CCCEEEEec--CCccHHHHHHHHHCCCC------eEEEeeChhHHhhccc---------CCCCeE-EeeCCCCCCCCccc
Q 023625 113 GLKSLVDVA--GGTGIMARAIATAFPDI------KCTVFDLPHVVDNLQG---------TNDNLD-FLGGNMFEAIPQAN 174 (279)
Q Consensus 113 ~~~~vlDvG--~G~G~~~~~l~~~~p~~------~~~~~D~~~~~~~a~~---------~~~ri~-~~~~d~~~~~~~~D 174 (279)
...+|.=+| |+.|..+..++...+-+ ....+|+++..+.++. ...... +...|..+...++|
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~ad 102 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVA 102 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCC
Confidence 345888888 56788777766665432 5899999665443331 111122 23333333456789
Q ss_pred eeeehhhhccCC---hh----HHHHHHHHHHHhCCC-CCCCcEEEEEe
Q 023625 175 AVLLKWILHNWN---DE----ESVKLLKKCKEAIPS-KDEGGKVIIID 214 (279)
Q Consensus 175 ~v~~~~vlh~~~---~~----~~~~~L~~~~~~L~~-~~pgG~lli~e 214 (279)
+|++..-.-.-+ .. ...++++.+.+.+.. +.|+.+++++.
T Consensus 103 vVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs 150 (345)
T 4h7p_A 103 IAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG 150 (345)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred EEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence 888755332211 11 234556655555421 01677777654
No 436
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=37.90 E-value=89 Score=25.75 Aligned_cols=100 Identities=11% Similarity=0.093 Sum_probs=50.7
Q ss_pred CCEEEEecCCccHHHHH--HHHHCCCCeEEEeeC-hhHHhh-cc------c-CCCCeEEeeCCCCCCCCccceeeehhhh
Q 023625 114 LKSLVDVAGGTGIMARA--IATAFPDIKCTVFDL-PHVVDN-LQ------G-TNDNLDFLGGNMFEAIPQANAVLLKWIL 182 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~-~~~~~~-a~------~-~~~ri~~~~~d~~~~~~~~D~v~~~~vl 182 (279)
..+|.=||+|.-..+.+ ++....-..++++|+ ++.++. +. . ....+++.. |-.+...++|+|++..-.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-GEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-CCGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-CCHHHhCCCCEEEECCCC
Confidence 35888899865444332 333322237999998 433321 11 1 113455555 333346679999875432
Q ss_pred ccCC-h------hHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 183 HNWN-D------EESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 183 h~~~-~------~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
-.-+ . .....+++++.+.+....|+++++++.
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 2111 1 122345555554442222789888743
No 437
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=37.84 E-value=34 Score=30.08 Aligned_cols=61 Identities=15% Similarity=0.247 Sum_probs=43.1
Q ss_pred CEEEEecCCccHHHHHHHHHCC--CCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC-------CCccceeee
Q 023625 115 KSLVDVAGGTGIMARAIATAFP--DIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA-------IPQANAVLL 178 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~-------~~~~D~v~~ 178 (279)
.+|+=+|| |.++..+++..- +..++++|. ++.++.+... -.+..+.||..++ ...+|+++.
T Consensus 4 M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~-~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 4 MKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDK-YDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH-SSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh-cCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 45666555 678888888764 457999998 7777776542 2578889998874 135888776
No 438
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=37.76 E-value=1.2e+02 Score=22.27 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=39.5
Q ss_pred CEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC--C----Cccceeeehh
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA--I----PQANAVLLKW 180 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~--~----~~~D~v~~~~ 180 (279)
.+|+=. ||+|..+.+++++. .+.++++++. +...... ...+++++.+|+.++ . .+.|+++...
T Consensus 4 ~~ilVt-GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 75 (206)
T 1hdo_A 4 KKIAIF-GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL 75 (206)
T ss_dssp CEEEEE-STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred CEEEEE-cCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--cCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence 456655 55677777776654 3468888887 4322211 136789999999863 1 2478877543
No 439
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=37.73 E-value=62 Score=26.08 Aligned_cols=81 Identities=10% Similarity=0.066 Sum_probs=47.7
Q ss_pred CEEEEecCCc--cHHHHHHHHHC-CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHH
Q 023625 115 KSLVDVAGGT--GIMARAIATAF-PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEES 190 (279)
Q Consensus 115 ~~vlDvG~G~--G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~ 190 (279)
.+|.=||||. +.++..+++.. +..++++.|. ++.++...+. -++... .|..+....+|+|++.- +++..
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~-~gi~~~-~~~~~~~~~aDvVilav-----~p~~~ 76 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK-CGVHTT-QDNRQGALNADVVVLAV-----KPHQI 76 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT-TCCEEE-SCHHHHHSSCSEEEECS-----CGGGH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH-cCCEEe-CChHHHHhcCCeEEEEe-----CHHHH
Confidence 4677888863 22333444432 2237899998 6666655432 133322 22221234589988843 56677
Q ss_pred HHHHHHHHHh-CC
Q 023625 191 VKLLKKCKEA-IP 202 (279)
Q Consensus 191 ~~~L~~~~~~-L~ 202 (279)
..+++++.+. ++
T Consensus 77 ~~vl~~l~~~~l~ 89 (280)
T 3tri_A 77 KMVCEELKDILSE 89 (280)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHhhccC
Confidence 8899999888 87
No 440
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=37.06 E-value=1.1e+02 Score=24.70 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=44.9
Q ss_pred CEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCCh-hHH
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWND-EES 190 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~-~~~ 190 (279)
.+|.=||+|. .+..+++.. .+.+++++|. ++.++...+. .......|..+-...+|+|++.- ++ ...
T Consensus 8 ~~I~iIG~G~--mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--g~~~~~~~~~e~~~~aDvvi~~v-----p~~~~~ 78 (303)
T 3g0o_A 8 FHVGIVGLGS--MGMGAARSCLRAGLSTWGADLNPQACANLLAE--GACGAAASAREFAGVVDALVILV-----VNAAQV 78 (303)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--TCSEEESSSTTTTTTCSEEEECC-----SSHHHH
T ss_pred CeEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc--CCccccCCHHHHHhcCCEEEEEC-----CCHHHH
Confidence 5788887653 333333322 2468999998 6666665543 12222334433345689988742 33 344
Q ss_pred HHHH---HHHHHhCC
Q 023625 191 VKLL---KKCKEAIP 202 (279)
Q Consensus 191 ~~~L---~~~~~~L~ 202 (279)
..++ +.+.+.++
T Consensus 79 ~~v~~~~~~l~~~l~ 93 (303)
T 3g0o_A 79 RQVLFGEDGVAHLMK 93 (303)
T ss_dssp HHHHC--CCCGGGSC
T ss_pred HHHHhChhhHHhhCC
Confidence 5555 66677787
No 441
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=37.04 E-value=20 Score=31.68 Aligned_cols=66 Identities=18% Similarity=0.236 Sum_probs=37.3
Q ss_pred CEEEEecCCcc-HH--HHHHHHHCC---CCeEEEeeC-hhHHhhccc--------CCCCeEEee-CCCCCCCCccceeee
Q 023625 115 KSLVDVAGGTG-IM--ARAIATAFP---DIKCTVFDL-PHVVDNLQG--------TNDNLDFLG-GNMFEAIPQANAVLL 178 (279)
Q Consensus 115 ~~vlDvG~G~G-~~--~~~l~~~~p---~~~~~~~D~-~~~~~~a~~--------~~~ri~~~~-~d~~~~~~~~D~v~~ 178 (279)
.+|.=||+|++ .. +..|+++.+ ..+++..|+ ++.++.... .....++.. .|+.+...++|+|++
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VVi 108 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMA 108 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEEE
Confidence 48999999997 22 234555532 346899998 544333211 112334443 354334557898887
Q ss_pred hh
Q 023625 179 KW 180 (279)
Q Consensus 179 ~~ 180 (279)
.-
T Consensus 109 aa 110 (472)
T 1u8x_X 109 HI 110 (472)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 442
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=36.89 E-value=42 Score=28.02 Aligned_cols=83 Identities=19% Similarity=0.230 Sum_probs=47.8
Q ss_pred CEEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hh-HHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHH
Q 023625 115 KSLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PH-VVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEES 190 (279)
Q Consensus 115 ~~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~-~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~ 190 (279)
.+|.=||+|. |. ++..+.+. +.++++.|. ++ ..+.+.+. .+... |..+....+|+|++. .++...
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~--G~~~~--~~~e~~~~aDvVila-----vp~~~~ 85 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAH--GLKVA--DVKTAVAAADVVMIL-----TPDEFQ 85 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHT--TCEEE--CHHHHHHTCSEEEEC-----SCHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHC--CCEEc--cHHHHHhcCCEEEEe-----CCcHHH
Confidence 5788888875 22 33333332 357888887 33 34555443 23322 322223358999884 356666
Q ss_pred HHHHH-HHHHhCCCCCCCcEEE
Q 023625 191 VKLLK-KCKEAIPSKDEGGKVI 211 (279)
Q Consensus 191 ~~~L~-~~~~~L~~~~pgG~ll 211 (279)
..+++ ++.+.++ ||..|+
T Consensus 86 ~~v~~~~i~~~l~---~~~ivi 104 (338)
T 1np3_A 86 GRLYKEEIEPNLK---KGATLA 104 (338)
T ss_dssp HHHHHHHTGGGCC---TTCEEE
T ss_pred HHHHHHHHHhhCC---CCCEEE
Confidence 77888 8888888 455333
No 443
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=36.79 E-value=1.5e+02 Score=23.27 Aligned_cols=93 Identities=11% Similarity=0.104 Sum_probs=52.6
Q ss_pred CEEEEecCCccHHHHHHHHHC--CCCeEEEeeChhHHhhcccCCCCeEEeeCCCCCC--CC----c-cceeeehhhhccC
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PDIKCTVFDLPHVVDNLQGTNDNLDFLGGNMFEA--IP----Q-ANAVLLKWILHNW 185 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~~--~~----~-~D~v~~~~vlh~~ 185 (279)
.+||=.| . |.++..++++. .+.++++++.... ....+++++.+|+.++ .. + +|+|+........
T Consensus 4 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~ 76 (286)
T 3gpi_A 4 SKILIAG-C-GDLGLELARRLTAQGHEVTGLRRSAQ-----PMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEY 76 (286)
T ss_dssp CCEEEEC-C-SHHHHHHHHHHHHTTCCEEEEECTTS-----CCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHH
T ss_pred CcEEEEC-C-CHHHHHHHHHHHHCCCEEEEEeCCcc-----ccccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCC
Confidence 4678777 4 88888887765 3457888886211 1236889999999763 22 3 7888754432111
Q ss_pred ChhH----HHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 186 NDEE----SVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 186 ~~~~----~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
..++ ......++.++++.. ..++++.+..
T Consensus 77 ~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS 109 (286)
T 3gpi_A 77 SDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSS 109 (286)
T ss_dssp C-----CCSHHHHHHHHHHTTTS-CCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcc
Confidence 1111 123345555566531 1246666554
No 444
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=36.26 E-value=61 Score=26.45 Aligned_cols=62 Identities=11% Similarity=0.282 Sum_probs=39.4
Q ss_pred EEEEecCCccHHHHHHHHHC---CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCC---C----ccceeeeh
Q 023625 116 SLVDVAGGTGIMARAIATAF---PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAI---P----QANAVLLK 179 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~---~----~~D~v~~~ 179 (279)
+||=. ||+|..+.+++++. ++.++++++. +...+.... ..+++++.+|+.++. . +.|+|+..
T Consensus 2 ~vlVt-GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~ 74 (345)
T 2bll_A 2 RVLIL-GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL 74 (345)
T ss_dssp EEEEE-TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT-CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred eEEEE-CCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc-CCCeEEEeccccCcHHHHHhhccCCCEEEEc
Confidence 34433 67788887777654 4678999987 433332222 258999999998631 1 36877753
No 445
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=35.94 E-value=59 Score=28.51 Aligned_cols=92 Identities=11% Similarity=0.176 Sum_probs=53.2
Q ss_pred HHHhchhhhCCCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhh-cccCCCCeEEeeCCCCCC-C------Cc
Q 023625 103 VIKDCKEVFEGLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDN-LQGTNDNLDFLGGNMFEA-I------PQ 172 (279)
Q Consensus 103 ~~~~~~~~~~~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~-a~~~~~ri~~~~~d~~~~-~------~~ 172 (279)
+.+.+...-.+.++|+=+|||. |..+...++. ..++.+++. ++-++. +..+ ++..++.||..++ . ..
T Consensus 224 ~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r~~~la~~l-~~~~Vi~GD~td~~~L~ee~i~~ 300 (461)
T 4g65_A 224 VMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQRAEKLSEEL-ENTIVFCGDAADQELLTEENIDQ 300 (461)
T ss_dssp HHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHC-TTSEEEESCTTCHHHHHHTTGGG
T ss_pred HHHhhccccccccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHHHHHHHHHC-CCceEEeccccchhhHhhcCchh
Confidence 4444432234567899888875 3333344433 356777776 444444 4455 7889999999873 1 25
Q ss_pred cceeeehhhhccCChhHHHHHHHHHHHhCC
Q 023625 173 ANAVLLKWILHNWNDEESVKLLKKCKEAIP 202 (279)
Q Consensus 173 ~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~ 202 (279)
+|+++..- ++++.--+..-+++-+.
T Consensus 301 ~D~~ia~T-----~~De~Ni~~~llAk~~g 325 (461)
T 4g65_A 301 VDVFIALT-----NEDETNIMSAMLAKRMG 325 (461)
T ss_dssp CSEEEECC-----SCHHHHHHHHHHHHHTT
T ss_pred hcEEEEcc-----cCcHHHHHHHHHHHHcC
Confidence 89888732 34443344444555555
No 446
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=35.89 E-value=1.8e+02 Score=24.30 Aligned_cols=78 Identities=13% Similarity=0.083 Sum_probs=44.3
Q ss_pred CCCEEEEecCCccHHHHHHHHHCC-CCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC------CCccceeeehhhhcc
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFP-DIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA------IPQANAVLLKWILHN 184 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~------~~~~D~v~~~~vlh~ 184 (279)
+..+|+=+|| |..+..+++... +..+++.|. ...++.++. .+..+..|..++ ..++|+|+..-
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~---~~~~~~~d~~d~~~l~~~~~~~DvVi~~~---- 85 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE---FATPLKVDASNFDKLVEVMKEFELVIGAL---- 85 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT---TSEEEECCTTCHHHHHHHHTTCSEEEECC----
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc---cCCcEEEecCCHHHHHHHHhCCCEEEEec----
Confidence 3468999987 444444444322 346788888 666666653 455566777652 23589888643
Q ss_pred CChhHHHHHHHHHHHh
Q 023625 185 WNDEESVKLLKKCKEA 200 (279)
Q Consensus 185 ~~~~~~~~~L~~~~~~ 200 (279)
++..-..+.+.|.++
T Consensus 86 -p~~~~~~v~~~~~~~ 100 (365)
T 3abi_A 86 -PGFLGFKSIKAAIKS 100 (365)
T ss_dssp -CGGGHHHHHHHHHHH
T ss_pred -CCcccchHHHHHHhc
Confidence 222223455555443
No 447
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=35.86 E-value=1.1e+02 Score=25.58 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=50.5
Q ss_pred CCCCEEEEecCCc-cH-HHHHHHHHCCCCeEEEeeCh-hHHhh-cc------cCCCCeEEe-eCCCCCCCCccceeeehh
Q 023625 112 EGLKSLVDVAGGT-GI-MARAIATAFPDIKCTVFDLP-HVVDN-LQ------GTNDNLDFL-GGNMFEAIPQANAVLLKW 180 (279)
Q Consensus 112 ~~~~~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~~-~~~~~-a~------~~~~ri~~~-~~d~~~~~~~~D~v~~~~ 180 (279)
.+..+|.=||+|. |. .+..++.+.---.++++|+. ..++. +. ......... ..|+ +...++|+|++..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~aDiVvi~a 95 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANSKLVIITA 95 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTEEEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCCCEEEEcc
Confidence 3457899999864 32 23344443211279999983 32221 11 111222333 4454 3456799988653
Q ss_pred hhccCC---h----hHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 181 ILHNWN---D----EESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 181 vlh~~~---~----~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
-.-.-+ . +....+++++.+.+....|++.++++.
T Consensus 96 G~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt 136 (331)
T 4aj2_A 96 GARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS 136 (331)
T ss_dssp SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 221111 1 123345555544443222789888765
No 448
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=35.29 E-value=18 Score=29.94 Aligned_cols=87 Identities=17% Similarity=0.156 Sum_probs=52.9
Q ss_pred EEEEec--CCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCC----CCCCC--CccceeeehhhhccCC
Q 023625 116 SLVDVA--GGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGN----MFEAI--PQANAVLLKWILHNWN 186 (279)
Q Consensus 116 ~vlDvG--~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d----~~~~~--~~~D~v~~~~vlh~~~ 186 (279)
+||-.| ||.|..+..+++.. ++++++.+. ++-.+.+++......+-..+ ..... .++|+++-.- .
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~-----g 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPV-----G 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESC-----C
T ss_pred eEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECC-----c
Confidence 788888 47788888888875 468888887 55555555431111111111 11111 2488876532 2
Q ss_pred hhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 187 DEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 187 ~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
. ..+..+.+.++ ++|+++++..
T Consensus 227 ~----~~~~~~~~~l~---~~G~iv~~G~ 248 (330)
T 1tt7_A 227 G----KQLASLLSKIQ---YGGSVAVSGL 248 (330)
T ss_dssp T----HHHHHHHTTEE---EEEEEEECCC
T ss_pred H----HHHHHHHHhhc---CCCEEEEEec
Confidence 2 24677788899 7999987654
No 449
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=35.02 E-value=91 Score=25.72 Aligned_cols=80 Identities=14% Similarity=0.154 Sum_probs=44.1
Q ss_pred CEEEEecCCc-cHH-HHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEe-------------eCCCCCCCCccceeee
Q 023625 115 KSLVDVAGGT-GIM-ARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFL-------------GGNMFEAIPQANAVLL 178 (279)
Q Consensus 115 ~~vlDvG~G~-G~~-~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~-------------~~d~~~~~~~~D~v~~ 178 (279)
.+|.=||+|. |.. +..|++. +.+++++|. ++.++..++. ..+.+. ..|..+....+|+|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDR-GAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH-TSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhc-CCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 4788888865 332 2333332 457899998 6665554321 012111 1111111235898887
Q ss_pred hhhhccCChhHHHHHHHHHHHhCC
Q 023625 179 KWILHNWNDEESVKLLKKCKEAIP 202 (279)
Q Consensus 179 ~~vlh~~~~~~~~~~L~~~~~~L~ 202 (279)
.- +......+++.+.+.++
T Consensus 82 ~v-----~~~~~~~~~~~l~~~l~ 100 (359)
T 1bg6_A 82 VV-----PAIHHASIAANIASYIS 100 (359)
T ss_dssp CS-----CGGGHHHHHHHHGGGCC
T ss_pred eC-----CchHHHHHHHHHHHhCC
Confidence 53 33344677888888888
No 450
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=34.78 E-value=82 Score=26.22 Aligned_cols=101 Identities=13% Similarity=0.113 Sum_probs=48.9
Q ss_pred CCCEEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hhHHhh-c------ccCCCCeEEeeCCCCCCCCccceeeehhhh
Q 023625 113 GLKSLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PHVVDN-L------QGTNDNLDFLGGNMFEAIPQANAVLLKWIL 182 (279)
Q Consensus 113 ~~~~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~-a------~~~~~ri~~~~~d~~~~~~~~D~v~~~~vl 182 (279)
...+|.=+|+|. |. ++..++...---+++++|. +..++. + ......+.+..+|. +...++|+|++..-.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~-~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEY-SDAKDADLVVITAGA 86 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCG-GGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcH-HHhcCCCEEEECCCC
Confidence 456888898643 22 2222333322127899998 433321 1 11113455555543 345578988875432
Q ss_pred ccCC---hh----HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 183 HNWN---DE----ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 183 h~~~---~~----~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
-.-+ .. ....+++.+.+.+....|++.++++.
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt 125 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 1111 11 12345566655554333789888764
No 451
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=34.30 E-value=1e+02 Score=24.94 Aligned_cols=40 Identities=25% Similarity=0.456 Sum_probs=23.9
Q ss_pred CCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 023625 170 IPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 216 (279)
Q Consensus 170 ~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~ 216 (279)
+.+||+|++...-..+++++ .+++.+.++ .||.++.+-..
T Consensus 56 L~~~D~vV~~~~~~~l~~~~----~~~l~~yV~---~Ggglv~~H~a 95 (281)
T 4e5v_A 56 FSPYQLVVLDYNGDSWPEET----NRRFLEYVQ---NGGGVVIYHAA 95 (281)
T ss_dssp CTTCSEEEECCCSSCCCHHH----HHHHHHHHH---TTCEEEEEGGG
T ss_pred hhcCCEEEEeCCCCcCCHHH----HHHHHHHHH---cCCCEEEEecc
Confidence 45699999766444556654 344444455 36777766543
No 452
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=33.89 E-value=1.1e+02 Score=25.02 Aligned_cols=98 Identities=11% Similarity=0.176 Sum_probs=49.5
Q ss_pred EEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hhHHhh-cc------c-CCCCeEEee-CCCCCCCCccceeeehhhhc
Q 023625 116 SLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PHVVDN-LQ------G-TNDNLDFLG-GNMFEAIPQANAVLLKWILH 183 (279)
Q Consensus 116 ~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~-a~------~-~~~ri~~~~-~d~~~~~~~~D~v~~~~vlh 183 (279)
+|.=+|+|. |. ++..++....--+++++|. ++.++. +. . .....++.. .| .+...++|+|++..-.-
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~~ 80 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCCC
Confidence 466677743 22 2222333322227999998 544321 11 1 212344443 35 44566799988764322
Q ss_pred cCC---h----hHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 184 NWN---D----EESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 184 ~~~---~----~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.-+ . ....++++.+.+.+....|++.++++.
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs 118 (294)
T 1oju_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 111 1 123456666666554434789888865
No 453
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=33.75 E-value=1.3e+02 Score=24.77 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=34.9
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCC-eEEEeeC-hhHHhhcc----c----CCCCeEEee-CCCCCCCCccceeeehh
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDI-KCTVFDL-PHVVDNLQ----G----TNDNLDFLG-GNMFEAIPQANAVLLKW 180 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~----~----~~~ri~~~~-~d~~~~~~~~D~v~~~~ 180 (279)
..+|.=||+|+=..+.+.+-...+. .++++|+ ++.++... . .....++.. .|+ +...++|+|+..-
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 4578888875533332222222343 7999998 44343211 0 112233333 565 5566799998764
No 454
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=33.42 E-value=63 Score=26.86 Aligned_cols=100 Identities=14% Similarity=0.128 Sum_probs=49.1
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCC-eEEEeeC-hhHHh-hccc-------CCCCeEEe-eCCCCCCCCccceeeehhhh
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDI-KCTVFDL-PHVVD-NLQG-------TNDNLDFL-GGNMFEAIPQANAVLLKWIL 182 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~-~a~~-------~~~ri~~~-~~d~~~~~~~~D~v~~~~vl 182 (279)
..+|.=||+|.=..+.+.+-...++ +++++|+ ++.++ .+.. .....++. ..|. +...++|+|++..-.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag~ 85 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAGV 85 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccCc
Confidence 4578888875422222222222334 8999998 43332 1111 11233343 3554 456678998875321
Q ss_pred ccCC---h----hHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 183 HNWN---D----EESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 183 h~~~---~----~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
-.-+ . .....+++.+.+.+....|++.++++.
T Consensus 86 p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 86 PRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp CCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence 1101 0 112345555554443222688888765
No 455
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=33.21 E-value=86 Score=27.42 Aligned_cols=65 Identities=15% Similarity=0.059 Sum_probs=40.2
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCeEEEeeC--hhHHhhcccCCCCeEEeeCCCCC-CCCccceeeeh
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIKCTVFDL--PHVVDNLQGTNDNLDFLGGNMFE-AIPQANAVLLK 179 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~--~~~~~~a~~~~~ri~~~~~d~~~-~~~~~D~v~~~ 179 (279)
+++||=||||.-.....-.-.--+.+++++|. .+.+..... ..+++++.+++.. ...++|+|+..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~-~~~i~~~~~~~~~~~l~~~~lVi~a 79 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-EGMLTLVEGPFDETLLDSCWLAIAA 79 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-TTSCEEEESSCCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHh-cCCEEEEECCCCccccCCccEEEEc
Confidence 57899999987655443222224678888885 222222111 2578888888765 45578888874
No 456
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=33.20 E-value=11 Score=24.96 Aligned_cols=25 Identities=12% Similarity=0.313 Sum_probs=20.3
Q ss_pred CccccccCceeecCCCeEecChhcch
Q 023625 1 MRILVHSGFFAQQKDDEYFLTPASRL 26 (279)
Q Consensus 1 Lr~L~~~g~l~~~~~~~y~~t~~s~~ 26 (279)
|+.|...|++.+.. |.|.+|+.++.
T Consensus 64 L~~L~~~Glv~~~~-g~y~l~~~g~~ 88 (96)
T 1y0u_A 64 LKVLEAGFCIERVG-ERWVVTDAGKI 88 (96)
T ss_dssp HHHHHHTTSEEEET-TEEEECTTTCC
T ss_pred HHHHHHCCCEEEEC-CEEEECCCchH
Confidence 35688899999888 79999998753
No 457
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=33.00 E-value=1.1e+02 Score=25.18 Aligned_cols=99 Identities=11% Similarity=0.103 Sum_probs=49.2
Q ss_pred CCEEEEecCCccHHHHH--HHHHCCCCeEEEeeC-hhHHhh-ccc------CCCCeEEeeCCCCCCCCccceeeehhhhc
Q 023625 114 LKSLVDVAGGTGIMARA--IATAFPDIKCTVFDL-PHVVDN-LQG------TNDNLDFLGGNMFEAIPQANAVLLKWILH 183 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~-~~~~~~-a~~------~~~ri~~~~~d~~~~~~~~D~v~~~~vlh 183 (279)
..+|.=+|+|.=..+.. ++...--..++.+|+ ++.++. +.. ....+++..++ .+...++|+|++..-.-
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~-~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE-YSDCKDADLVVITAGAP 83 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC-GGGGTTCSEEEECCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECC-HHHhCCCCEEEECCCCC
Confidence 46888898754333222 222212236899998 433331 111 12455555533 33466799998754321
Q ss_pred cCCh-------hHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 184 NWND-------EESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 184 ~~~~-------~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.-+- .....+++++.+.++...|+++++++
T Consensus 84 ~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 120 (318)
T 1ez4_A 84 QKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA 120 (318)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 1110 02234555555444222278988885
No 458
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=32.57 E-value=63 Score=27.28 Aligned_cols=79 Identities=15% Similarity=0.187 Sum_probs=44.6
Q ss_pred CCEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCcc---ceeeehhhhccCCh
Q 023625 114 LKSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQA---NAVLLKWILHNWND 187 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~---D~v~~~~vlh~~~~ 187 (279)
..+|.=||+| ..+..+++.. .+.+++++|. ++.++...+. .+.. ..+..+-.... |+|++. .++
T Consensus 22 ~mkIgiIGlG--~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~--g~~~-~~s~~e~~~~a~~~DvVi~~-----vp~ 91 (358)
T 4e21_A 22 SMQIGMIGLG--RMGADMVRRLRKGGHECVVYDLNVNAVQALERE--GIAG-ARSIEEFCAKLVKPRVVWLM-----VPA 91 (358)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT--TCBC-CSSHHHHHHHSCSSCEEEEC-----SCG
T ss_pred CCEEEEECch--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC--CCEE-eCCHHHHHhcCCCCCEEEEe-----CCH
Confidence 4578888765 3433333322 2468999998 6666655432 2211 11111101123 888874 244
Q ss_pred hHHHHHHHHHHHhCC
Q 023625 188 EESVKLLKKCKEAIP 202 (279)
Q Consensus 188 ~~~~~~L~~~~~~L~ 202 (279)
.....+++.+.+.++
T Consensus 92 ~~v~~vl~~l~~~l~ 106 (358)
T 4e21_A 92 AVVDSMLQRMTPLLA 106 (358)
T ss_dssp GGHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHhhCC
Confidence 466788899999998
No 459
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=32.46 E-value=42 Score=27.66 Aligned_cols=119 Identities=12% Similarity=0.244 Sum_probs=70.0
Q ss_pred EEEEecCCccHHHHHHHHHCCCCe-EEEeeC-hhHHhhcccCCCCeEEeeCCCCC----CCCccceeeehhhhccC----
Q 023625 116 SLVDVAGGTGIMARAIATAFPDIK-CTVFDL-PHVVDNLQGTNDNLDFLGGNMFE----AIPQANAVLLKWILHNW---- 185 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~----~~~~~D~v~~~~vlh~~---- 185 (279)
+|+|+=||.|.++..+.++. .+ +...|+ +..++.-+.. -.-.++.+|+.+ .++..|+++..-....+
T Consensus 2 kvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N-~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag 78 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESN-HSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGG 78 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHH-CCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETT
T ss_pred eEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHH-CCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCC
Confidence 68999999999999988874 44 446777 5555544432 123566778765 24568888765433333
Q ss_pred -----ChhHHHHHHH---HHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhcchhhhhhcCCeeCCHHHHHHHHHH
Q 023625 186 -----NDEESVKLLK---KCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLA 257 (279)
Q Consensus 186 -----~~~~~~~~L~---~~~~~L~~~~pgG~lli~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~r~~~e~~~ll~~ 257 (279)
.|+. -.++. ++.+.++ | +++++|.+..=.. ........++.+.|++
T Consensus 79 ~~~g~~d~R-~~L~~~~~r~i~~~~---P--k~~~~ENV~gl~~--------------------~~~~~~~~~i~~~l~~ 132 (331)
T 3ubt_Y 79 SLRGIDDPR-GKLFYEYIRILKQKK---P--IFFLAENVKGMMA--------------------QRHNKAVQEFIQEFDN 132 (331)
T ss_dssp EECCTTCGG-GHHHHHHHHHHHHHC---C--SEEEEEECCGGGG--------------------CTTSHHHHHHHHHHHH
T ss_pred CccCCCCch-hHHHHHHHHHHhccC---C--eEEEeeeeccccc--------------------ccccchhhhhhhhhcc
Confidence 2321 12333 3444556 3 5788887642110 0111245677788888
Q ss_pred CCCcee
Q 023625 258 AGFSHY 263 (279)
Q Consensus 258 aGf~~~ 263 (279)
.|+.+.
T Consensus 133 ~GY~v~ 138 (331)
T 3ubt_Y 133 AGYDVH 138 (331)
T ss_dssp HTEEEE
T ss_pred CCcEEE
Confidence 898754
No 460
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=32.46 E-value=1.8e+02 Score=22.87 Aligned_cols=69 Identities=17% Similarity=0.342 Sum_probs=42.8
Q ss_pred CEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChhHHH
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDEESV 191 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~~~~ 191 (279)
++||=-|++.| .+.++++++ .+.++++.|+ ++..+...+...++.++..|+. .++++.
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~------------------~~~~v~ 63 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVA------------------DPLTLK 63 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTT------------------SHHHHH
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCC------------------CHHHHH
Confidence 45665555554 455555544 3678999998 5555444433356777777764 345667
Q ss_pred HHHHHHHHhCC
Q 023625 192 KLLKKCKEAIP 202 (279)
Q Consensus 192 ~~L~~~~~~L~ 202 (279)
++++++.+.+.
T Consensus 64 ~~v~~~~~~~g 74 (247)
T 3ged_A 64 KFVEYAMEKLQ 74 (247)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHcC
Confidence 77888877765
No 461
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=31.68 E-value=1.1e+02 Score=24.94 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=35.6
Q ss_pred EEEEecCCc--cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChh-HHH
Q 023625 116 SLVDVAGGT--GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDE-ESV 191 (279)
Q Consensus 116 ~vlDvG~G~--G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~-~~~ 191 (279)
+|-=||.|. ...+..|+++ +.+++++|+ ++.++...+. .... ..+..+-....|+|++. .+++ ...
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~--G~~~-~~s~~e~~~~~dvvi~~-----l~~~~~~~ 76 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTKL--GATV-VENAIDAITPGGIVFSV-----LADDAAVE 76 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEC-------CTTTTT--TCEE-CSSGGGGCCTTCEEEEC-----CSSHHHHH
T ss_pred cEEEEecHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHc--CCeE-eCCHHHHHhcCCceeee-----ccchhhHH
Confidence 555566544 2233334443 567999998 6555544332 1221 11222222357888764 2333 223
Q ss_pred HH-HHHHHHhCCCCCCCcE
Q 023625 192 KL-LKKCKEAIPSKDEGGK 209 (279)
Q Consensus 192 ~~-L~~~~~~L~~~~pgG~ 209 (279)
.+ ...+...++ +|+.
T Consensus 77 ~v~~~~~~~~~~---~~~i 92 (297)
T 4gbj_A 77 ELFSMELVEKLG---KDGV 92 (297)
T ss_dssp HHSCHHHHHHHC---TTCE
T ss_pred HHHHHHHHhhcC---CCeE
Confidence 32 345667777 4553
No 462
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=31.62 E-value=1.3e+02 Score=24.56 Aligned_cols=90 Identities=17% Similarity=0.223 Sum_probs=47.8
Q ss_pred CCCEEEEecCCc-c-HHHHHHHHHCCCCeEEEeeChhHHhhcccCC-----CCeEEe-----eCCCCCCCCccceeeehh
Q 023625 113 GLKSLVDVAGGT-G-IMARAIATAFPDIKCTVFDLPHVVDNLQGTN-----DNLDFL-----GGNMFEAIPQANAVLLKW 180 (279)
Q Consensus 113 ~~~~vlDvG~G~-G-~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~-----~ri~~~-----~~d~~~~~~~~D~v~~~~ 180 (279)
...+|.=||+|. | .++..|++. +..++++-.++.++..++.. ....+. ..|. +....+|+|++.-
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vilav 94 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA--GHEVILIARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVLFCV 94 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT--TCEEEEECCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEEECC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC--CCeEEEEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEEEEc
Confidence 356899998764 2 233344443 34677772265655544210 111111 1111 1123589888753
Q ss_pred hhccCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 181 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 181 vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
+..+...+++.+.+.++ |+..++.+
T Consensus 95 -----k~~~~~~~l~~l~~~l~---~~~~iv~~ 119 (318)
T 3hwr_A 95 -----KSTDTQSAALAMKPALA---KSALVLSL 119 (318)
T ss_dssp -----CGGGHHHHHHHHTTTSC---TTCEEEEE
T ss_pred -----ccccHHHHHHHHHHhcC---CCCEEEEe
Confidence 44456788999998888 56555543
No 463
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=31.30 E-value=18 Score=29.63 Aligned_cols=81 Identities=9% Similarity=0.096 Sum_probs=44.4
Q ss_pred CEEEEecCCc-cH-HHHHHHHHC--C-C-CeEEEeeChhHHhhccc-CCCCeEEee--CC-----C--CCC---CCccce
Q 023625 115 KSLVDVAGGT-GI-MARAIATAF--P-D-IKCTVFDLPHVVDNLQG-TNDNLDFLG--GN-----M--FEA---IPQANA 175 (279)
Q Consensus 115 ~~vlDvG~G~-G~-~~~~l~~~~--p-~-~~~~~~D~~~~~~~a~~-~~~ri~~~~--~d-----~--~~~---~~~~D~ 175 (279)
.+|.=||+|. |. ++..|++.. + + .+++++|.++.++..++ . .+.+.. ++ + .++ ...+|+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAG--GLRVVTPSRDFLARPTCVTDNPAEVGTVDY 86 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHT--SEEEECSSCEEEECCSEEESCHHHHCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcC--CeEEEeCCCCeEEecceEecCccccCCCCE
Confidence 4788899884 43 334444440 1 3 57888888544444433 2 232221 11 0 011 235898
Q ss_pred eeehhhhccCChhHHHHHHHHHHHhCC
Q 023625 176 VLLKWILHNWNDEESVKLLKKCKEAIP 202 (279)
Q Consensus 176 v~~~~vlh~~~~~~~~~~L~~~~~~L~ 202 (279)
|++.- ++.+...+++.+.+.++
T Consensus 87 vil~v-----k~~~~~~v~~~i~~~l~ 108 (317)
T 2qyt_A 87 ILFCT-----KDYDMERGVAEIRPMIG 108 (317)
T ss_dssp EEECC-----SSSCHHHHHHHHGGGEE
T ss_pred EEEec-----CcccHHHHHHHHHhhcC
Confidence 88753 33345677888888887
No 464
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=31.10 E-value=1.9e+02 Score=22.49 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=38.4
Q ss_pred CEEEEecCCccHHHH----HHHHHCCCCeEEEeeC-hhHHhhcc-cCCCCeEEeeCCCCCCCCccceeeehhhhccCChh
Q 023625 115 KSLVDVAGGTGIMAR----AIATAFPDIKCTVFDL-PHVVDNLQ-GTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDE 188 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~----~l~~~~p~~~~~~~D~-~~~~~~a~-~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~ 188 (279)
+++|=.|++. ..+. .|+++..+.++++.+. ++.++... +...++.++..|+.+ .+
T Consensus 3 k~~lVTGas~-GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~------------------~~ 63 (254)
T 3kzv_A 3 KVILVTGVSR-GIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE------------------DS 63 (254)
T ss_dssp CEEEECSTTS-HHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTS------------------HH
T ss_pred CEEEEECCCc-hHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCC------------------HH
Confidence 3556556544 4444 4444445678888887 44444332 223567777777642 34
Q ss_pred HHHHHHHHHHHhCC
Q 023625 189 ESVKLLKKCKEAIP 202 (279)
Q Consensus 189 ~~~~~L~~~~~~L~ 202 (279)
++.++++++.+...
T Consensus 64 ~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 64 VLKQLVNAAVKGHG 77 (254)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcC
Confidence 45566666666554
No 465
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=31.05 E-value=32 Score=26.35 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=24.9
Q ss_pred EEEEecCCccHHHHHHHHHCCCCeEEEeeC
Q 023625 116 SLVDVAGGTGIMARAIATAFPDIKCTVFDL 145 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 145 (279)
.|+=||+|...++.++.-+--+.+++++|.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 488899999988887766666889999996
No 466
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=30.97 E-value=45 Score=27.63 Aligned_cols=88 Identities=16% Similarity=0.170 Sum_probs=48.0
Q ss_pred CEEEEecCCc-cH-HHHHHHHHCCCCeEEEeeChhHHhhcccCCCCeEEeeC------CC--CC---CCCccceeeehhh
Q 023625 115 KSLVDVAGGT-GI-MARAIATAFPDIKCTVFDLPHVVDNLQGTNDNLDFLGG------NM--FE---AIPQANAVLLKWI 181 (279)
Q Consensus 115 ~~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ri~~~~~------d~--~~---~~~~~D~v~~~~v 181 (279)
.+|.=||+|. |. ++..|++. +..++++|.++..+..++. .+..... .+ .+ ....+|+|++.-
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vilav- 78 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA--GEAINVLARGATLQALQTA--GLRLTEDGATHTLPVRATHDAAALGEQDVVIVAV- 78 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT--TCCEEEECCHHHHHHHHHT--CEEEEETTEEEEECCEEESCHHHHCCCSEEEECC-
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEEChHHHHHHHHC--CCEEecCCCeEEEeeeEECCHHHcCCCCEEEEeC-
Confidence 4788888764 22 33334443 3578999985444444432 1221110 00 01 123589888743
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+..+...+++.+.+.++ |+..++.+-
T Consensus 79 ----k~~~~~~~~~~l~~~l~---~~~~iv~~~ 104 (335)
T 3ghy_A 79 ----KAPALESVAAGIAPLIG---PGTCVVVAM 104 (335)
T ss_dssp ----CHHHHHHHHGGGSSSCC---TTCEEEECC
T ss_pred ----CchhHHHHHHHHHhhCC---CCCEEEEEC
Confidence 44566678888888887 566555433
No 467
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=30.66 E-value=1.4e+02 Score=25.95 Aligned_cols=95 Identities=16% Similarity=0.174 Sum_probs=50.5
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCCeEEEeeC-hhHHhhcccC----------------CCCeEEeeCCCCCCCCcccee
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDIKCTVFDL-PHVVDNLQGT----------------NDNLDFLGGNMFEAIPQANAV 176 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------------~~ri~~~~~d~~~~~~~~D~v 176 (279)
..+|.=||+|.=....+.+-+. +.+++++|. ++.++..++. ..++.+. .|..+....+|+|
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~t-td~~ea~~~aDvV 113 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRAT-TDKHDAYRNADYV 113 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEE-SCHHHHHTTCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEE-cCHHHHHhCCCEE
Confidence 4578888876533333322233 678999999 7766655431 0133322 2221123357888
Q ss_pred eehhhhcc-----CCh-hHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 177 LLKWILHN-----WND-EESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 177 ~~~~vlh~-----~~~-~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
++.-.-.. -+| ......++.+.+ ++ || .++|.+.
T Consensus 114 iiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~---~g-~iVV~~S 153 (432)
T 3pid_A 114 IIATPTDYDPKTNYFNTSTVEAVIRDVTE-IN---PN-AVMIIKS 153 (432)
T ss_dssp EECCCCEEETTTTEEECHHHHHHHHHHHH-HC---TT-SEEEECS
T ss_pred EEeCCCccccccccccHHHHHHHHHHHHh-cC---CC-cEEEEeC
Confidence 87521110 001 246677888888 88 45 4555443
No 468
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=30.63 E-value=57 Score=26.25 Aligned_cols=89 Identities=15% Similarity=0.261 Sum_probs=48.9
Q ss_pred CCEEEEecCCccHHHHHHHHH--CCCCeEEEeeC-hhHHhhcccC-----------C------------CCeEEeeCCCC
Q 023625 114 LKSLVDVAGGTGIMARAIATA--FPDIKCTVFDL-PHVVDNLQGT-----------N------------DNLDFLGGNMF 167 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~--~p~~~~~~~D~-~~~~~~a~~~-----------~------------~ri~~~~~d~~ 167 (279)
..+|.=||+|. .+..+++. ..+.+++++|. ++.++.+.+. . .++.+ ..|..
T Consensus 4 ~~kV~VIGaG~--mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGV--LGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 35777888764 33333322 13568999998 6666554321 0 12232 22222
Q ss_pred CCCCccceeeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEE
Q 023625 168 EAIPQANAVLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVII 212 (279)
Q Consensus 168 ~~~~~~D~v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli 212 (279)
+...++|+|+..-.- +.+....+++++.+.++ |+. +++
T Consensus 81 ~~~~~aDlVi~av~~---~~~~~~~v~~~l~~~~~---~~~-il~ 118 (283)
T 4e12_A 81 QAVKDADLVIEAVPE---SLDLKRDIYTKLGELAP---AKT-IFA 118 (283)
T ss_dssp HHTTTCSEEEECCCS---CHHHHHHHHHHHHHHSC---TTC-EEE
T ss_pred HHhccCCEEEEeccC---cHHHHHHHHHHHHhhCC---CCc-EEE
Confidence 224468998875321 11245678889999998 454 444
No 469
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=30.55 E-value=85 Score=27.13 Aligned_cols=93 Identities=12% Similarity=0.083 Sum_probs=47.7
Q ss_pred EEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hhHHhhcccC------------------CCCeEEeeCCCCCCCCccc
Q 023625 116 SLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PHVVDNLQGT------------------NDNLDFLGGNMFEAIPQAN 174 (279)
Q Consensus 116 ~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------------~~ri~~~~~d~~~~~~~~D 174 (279)
+|.=||+|. |. ++..|++. +.+++++|. ++.++..++. ..++.+. .|..+....+|
T Consensus 2 kI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t-~~~~~~~~~aD 78 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGT-TDFKKAVLDSD 78 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHHHHHTCS
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEe-CCHHHHhccCC
Confidence 466677764 33 33344443 457999998 6666655431 1123321 12111122478
Q ss_pred eeeehhhh--ccC--Ch-hHHHHHHHHHHHhCCCCCCC--cEEEEEe
Q 023625 175 AVLLKWIL--HNW--ND-EESVKLLKKCKEAIPSKDEG--GKVIIID 214 (279)
Q Consensus 175 ~v~~~~vl--h~~--~~-~~~~~~L~~~~~~L~~~~pg--G~lli~e 214 (279)
+|++.--- +.- +| ....++++.+.+.++ +. |.+++..
T Consensus 79 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~---~~~~~~iVV~~ 122 (436)
T 1mv8_A 79 VSFICVGTPSKKNGDLDLGYIETVCREIGFAIR---EKSERHTVVVR 122 (436)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHT---TCCSCCEEEEC
T ss_pred EEEEEcCCCcccCCCcchHHHHHHHHHHHHHhc---ccCCCcEEEEe
Confidence 88874311 100 00 015677888888888 41 5565544
No 470
>2jhp_A VP4 core protein; viral protein, viral capping enzyme, virion PR viral protein; HET: SAH GUN; 2.5A {Bluetongue virus 10} PDB: 2jh8_A* 2jha_A* 2jhc_A* 2jh9_A*
Probab=30.25 E-value=59 Score=29.09 Aligned_cols=90 Identities=8% Similarity=0.098 Sum_probs=52.9
Q ss_pred HHHhchhhhCCCCEEEEecCCccHHHHHHHHHCCCCeEEEeeChhHHhhcccCCCCeEEeeCCCCCCC-Cccceeeehhh
Q 023625 103 VIKDCKEVFEGLKSLVDVAGGTGIMARAIATAFPDIKCTVFDLPHVVDNLQGTNDNLDFLGGNMFEAI-PQANAVLLKWI 181 (279)
Q Consensus 103 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ri~~~~~d~~~~~-~~~D~v~~~~v 181 (279)
++.-++...-....|.=||||.|.....++++-|. . -.|+++++-|.-.|. +...+++....
T Consensus 179 LVSMLDY~iysad~v~YVG~GdlRTl~~Fa~rd~~----------------R-F~Ri~W~~~DPIa~e~~~~NV~~~~~~ 241 (644)
T 2jhp_A 179 LVSMLDYIVYSAEEVHYIGCGDLRTLMQFKKRSPG----------------R-FRRVLWHVYDPIAPECSDPNVIVHNIM 241 (644)
T ss_dssp HHHHHHHHCSSCSEEEEETCTTSHHHHHHHHHCHH----------------H-HHTSEEEEECTTCCCCCCTTEEEECCC
T ss_pred HHHHHHhhhccccEEEEeccCCcHHHHHHHhhChh----------------h-hhceEEEEecCcCCCCCCCceEEEEEE
Confidence 44444332445679999999999999999998653 0 146666666654432 22456666555
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 218 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~~~~ 218 (279)
++. ..+ +++.. ..++ ..-+++|.|.-.+
T Consensus 242 V~~--~~D---l~~~~-~~~~---~~erlliWDVssD 269 (644)
T 2jhp_A 242 VDS--KKD---ILKHM-NFLK---RVERLFIWDVSSD 269 (644)
T ss_dssp CCS--THH---HHTTC-CTTS---CCCEEEEECCCCC
T ss_pred ecC--HHH---HHHHh-hccc---cccEEEEEEeccC
Confidence 542 222 23222 2223 3568888886544
No 471
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=30.22 E-value=75 Score=26.12 Aligned_cols=97 Identities=12% Similarity=0.110 Sum_probs=47.5
Q ss_pred EEEEecCCccHHH--HHHHHHCCCCeEEEeeC-hhHHhh-ccc------CCCCeEEeeCCCCCCCCccceeeehhhhccC
Q 023625 116 SLVDVAGGTGIMA--RAIATAFPDIKCTVFDL-PHVVDN-LQG------TNDNLDFLGGNMFEAIPQANAVLLKWILHNW 185 (279)
Q Consensus 116 ~vlDvG~G~G~~~--~~l~~~~p~~~~~~~D~-~~~~~~-a~~------~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~ 185 (279)
+|.=+|+|.=..+ ..++....--+++.+|+ ++.++. +.. ...++++..+| .+...++|+|++..-.-.-
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~-~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGS-YGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECC-GGGGTTEEEEEECCCCCCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECC-HHHhCCCCEEEECCCCCCC
Confidence 5667776442222 22333333346999998 433331 221 11355666544 3356679999875422111
Q ss_pred ---Ch----hHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 186 ---ND----EESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 186 ---~~----~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
+. .....+++++.+.++...|+++++++
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 115 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA 115 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe
Confidence 11 11234455554443211168988875
No 472
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=30.11 E-value=1.3e+02 Score=23.85 Aligned_cols=76 Identities=9% Similarity=-0.020 Sum_probs=41.6
Q ss_pred EEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCChh-HHHH
Q 023625 116 SLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWNDE-ESVK 192 (279)
Q Consensus 116 ~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~~-~~~~ 192 (279)
+|.=||+|. |......+.+ +.+++++|. ++..+...+. .+... +..+....+|+|++.- +.+ ....
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~~~~~~~~~~--g~~~~--~~~~~~~~~D~vi~~v-----~~~~~~~~ 71 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR--RFPTLVWNRTFEKALRHQEE--FGSEA--VPLERVAEARVIFTCL-----PTTREVYE 71 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT--TSCEEEECSSTHHHHHHHHH--HCCEE--CCGGGGGGCSEEEECC-----SSHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHC--CCccc--CHHHHHhCCCEEEEeC-----CChHHHHH
Confidence 567778775 4433333333 567899998 5555544321 11121 1111233589888743 333 3556
Q ss_pred HHHHHHHhCC
Q 023625 193 LLKKCKEAIP 202 (279)
Q Consensus 193 ~L~~~~~~L~ 202 (279)
+++.+.+.++
T Consensus 72 v~~~l~~~l~ 81 (289)
T 2cvz_A 72 VAEALYPYLR 81 (289)
T ss_dssp HHHHHTTTCC
T ss_pred HHHHHHhhCC
Confidence 7788877887
No 473
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=29.77 E-value=1.3e+02 Score=22.99 Aligned_cols=53 Identities=8% Similarity=0.006 Sum_probs=33.0
Q ss_pred CEEEEecCCccHHHHHHHHHC--CC--CeEEEeeC-hhHHhhcccC-CCCeEEeeCCCCC
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PD--IKCTVFDL-PHVVDNLQGT-NDNLDFLGGNMFE 168 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~--~~~~~~D~-~~~~~~a~~~-~~ri~~~~~d~~~ 168 (279)
+++|=.| |+|.++.++++++ .+ .++++.+. +...+..+.. ..++.++..|+.+
T Consensus 4 k~vlItG-asggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~ 62 (250)
T 1yo6_A 4 GSVVVTG-ANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC 62 (250)
T ss_dssp SEEEESS-CSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC
T ss_pred CEEEEec-CCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCC
Confidence 4566555 5566666666644 23 78888887 4433333222 4688999999876
No 474
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=29.71 E-value=1.3e+02 Score=24.95 Aligned_cols=92 Identities=16% Similarity=0.186 Sum_probs=51.2
Q ss_pred hCCCCEEEEec--CCccHHHHHHHHHCCCCeEEE-eeCh-h---HHhhcccCCCCeEEee-----CCCCCC---CCccce
Q 023625 111 FEGLKSLVDVA--GGTGIMARAIATAFPDIKCTV-FDLP-H---VVDNLQGTNDNLDFLG-----GNMFEA---IPQANA 175 (279)
Q Consensus 111 ~~~~~~vlDvG--~G~G~~~~~l~~~~p~~~~~~-~D~~-~---~~~~a~~~~~ri~~~~-----~d~~~~---~~~~D~ 175 (279)
..++.+||=+| ||.|.++..+++.. ++++++ .+.. . -.+.+++......+-. .++.+- .+++|+
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dv 243 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRL 243 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSE
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceE
Confidence 45678999998 47889999999875 455544 4432 1 2344544321111111 111111 124787
Q ss_pred eeehhhhccCChhHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 176 VLLKWILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 176 v~~~~vlh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
++-.- ..+. +..+.++++ ++|+++++..
T Consensus 244 vid~~-----g~~~----~~~~~~~l~---~~G~iv~~G~ 271 (357)
T 1zsy_A 244 ALNCV-----GGKS----STELLRQLA---RGGTMVTYGG 271 (357)
T ss_dssp EEESS-----CHHH----HHHHHTTSC---TTCEEEECCC
T ss_pred EEECC-----CcHH----HHHHHHhhC---CCCEEEEEec
Confidence 76432 2222 234678899 7999988753
No 475
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=29.40 E-value=2e+02 Score=22.23 Aligned_cols=52 Identities=17% Similarity=0.338 Sum_probs=30.1
Q ss_pred CEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCC
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMF 167 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~ 167 (279)
+++|=.|++ |..+.++++++ .+.++++.|. ++..+.......++.++..|+.
T Consensus 3 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~ 57 (247)
T 3dii_A 3 RGVIVTGGG-HGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVA 57 (247)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTT
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCC
Confidence 355655544 44555555543 3578999998 4444444332356677777764
No 476
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=28.97 E-value=40 Score=28.32 Aligned_cols=31 Identities=19% Similarity=0.173 Sum_probs=25.3
Q ss_pred CEEEEecCCccHHHHHHHHHCCCCeEEEeeC
Q 023625 115 KSLVDVAGGTGIMARAIATAFPDIKCTVFDL 145 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 145 (279)
.+|+=||+|.+.++.+++-+--+.+++++|.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 4799999999888877766666788999875
No 477
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=28.76 E-value=2.3e+02 Score=22.76 Aligned_cols=67 Identities=15% Similarity=0.094 Sum_probs=40.0
Q ss_pred CCCEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhccc-----CCCCeEEe-eCCCCCC--C----Cccceee
Q 023625 113 GLKSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQG-----TNDNLDFL-GGNMFEA--I----PQANAVL 177 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~-~~d~~~~--~----~~~D~v~ 177 (279)
...+||=. ||+|..+.++++++ .+.++++++. +...+.... ...+++++ .+|+.++ . .+.|+|+
T Consensus 10 ~~~~vlVT-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVT-GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEE-CCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 34567755 55677777666644 2467888887 333222211 12578888 7998763 2 2478877
Q ss_pred ehh
Q 023625 178 LKW 180 (279)
Q Consensus 178 ~~~ 180 (279)
...
T Consensus 89 h~A 91 (342)
T 1y1p_A 89 HIA 91 (342)
T ss_dssp ECC
T ss_pred EeC
Confidence 544
No 478
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=28.74 E-value=89 Score=25.88 Aligned_cols=100 Identities=13% Similarity=0.145 Sum_probs=48.4
Q ss_pred CCEEEEecCCccHHHHHHHHHCCCC-eEEEeeC-hhHHh-hccc-------CCCCeEEe-eCCCCCCCCccceeeehhhh
Q 023625 114 LKSLVDVAGGTGIMARAIATAFPDI-KCTVFDL-PHVVD-NLQG-------TNDNLDFL-GGNMFEAIPQANAVLLKWIL 182 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~-~a~~-------~~~ri~~~-~~d~~~~~~~~D~v~~~~vl 182 (279)
..+|.=||+|.=..+.+.+-...++ +++++|+ +..++ .+.. ......+. ..|. +...++|+|++..-.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~-~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDY-KDLENSDVVIVTAGV 83 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCH-HHHCCCCEEEEcCCc
Confidence 3578888875422222222222234 8999998 43332 1111 01233444 2443 455678998875322
Q ss_pred ccC---Ch----hHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 183 HNW---ND----EESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 183 h~~---~~----~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
-.- +. .....+++++.+.+....|++.++++.
T Consensus 84 p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 84 PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 111 11 113345555554443222688888764
No 479
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=28.55 E-value=1.2e+02 Score=24.66 Aligned_cols=83 Identities=8% Similarity=-0.002 Sum_probs=46.1
Q ss_pred CCCEEEEecCCc-cHHHHHHHHHCCCCeEEEeeC-hhHHhhcccCCCCeEEee-CCCCCCCCccceeeehhhhccCChhH
Q 023625 113 GLKSLVDVAGGT-GIMARAIATAFPDIKCTVFDL-PHVVDNLQGTNDNLDFLG-GNMFEAIPQANAVLLKWILHNWNDEE 189 (279)
Q Consensus 113 ~~~~vlDvG~G~-G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~ri~~~~-~d~~~~~~~~D~v~~~~vlh~~~~~~ 189 (279)
..++|+=||+|. |......++.+ +.+++++|. +...+.+.+. .++... .++.+-..++|+|+..-.+|.++.+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~~--g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~- 231 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARITEM--GLVPFHTDELKEHVKDIDICINTIPSMILNQT- 231 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--TCEEEEGGGHHHHSTTCSEEEECCSSCCBCHH-
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHC--CCeEEchhhHHHHhhCCCEEEECCChhhhCHH-
Confidence 467899998643 33333444444 468999998 5444333322 223221 1221124568999987776655432
Q ss_pred HHHHHHHHHHhCCCCCCCcE
Q 023625 190 SVKLLKKCKEAIPSKDEGGK 209 (279)
Q Consensus 190 ~~~~L~~~~~~L~~~~pgG~ 209 (279)
..+.|+ ||+.
T Consensus 232 -------~~~~mk---~g~~ 241 (300)
T 2rir_A 232 -------VLSSMT---PKTL 241 (300)
T ss_dssp -------HHTTSC---TTCE
T ss_pred -------HHHhCC---CCCE
Confidence 235678 5663
No 480
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=28.54 E-value=1.4e+02 Score=24.31 Aligned_cols=66 Identities=15% Similarity=0.264 Sum_probs=40.8
Q ss_pred CCEEEEecCCccHHHHHHHHHC--CCCeEEEeeCh-h-HHhhccc--CCCCeEEeeCCCCCC-CCccceeeehh
Q 023625 114 LKSLVDVAGGTGIMARAIATAF--PDIKCTVFDLP-H-VVDNLQG--TNDNLDFLGGNMFEA-IPQANAVLLKW 180 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~~-~-~~~~a~~--~~~ri~~~~~d~~~~-~~~~D~v~~~~ 180 (279)
..+||=. ||+|.++.+++++. .+.++++++.. . ..+.... ...+++++.+|+.++ ..+.|+|+...
T Consensus 27 ~~~vlVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A 99 (343)
T 2b69_A 27 RKRILIT-GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLA 99 (343)
T ss_dssp CCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECC
T ss_pred CCEEEEE-cCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECc
Confidence 4567755 56777777776654 24678888862 1 1111111 125789999999874 45688887543
No 481
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=28.11 E-value=51 Score=27.17 Aligned_cols=80 Identities=14% Similarity=0.117 Sum_probs=45.7
Q ss_pred CEEEEecCCc-c-HHHHHHHHHC--CCCeEEEeeC-hh--HHhhcccCCCCeEEeeCCCCCCCCccceeeehhhhccCCh
Q 023625 115 KSLVDVAGGT-G-IMARAIATAF--PDIKCTVFDL-PH--VVDNLQGTNDNLDFLGGNMFEAIPQANAVLLKWILHNWND 187 (279)
Q Consensus 115 ~~vlDvG~G~-G-~~~~~l~~~~--p~~~~~~~D~-~~--~~~~a~~~~~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~~ 187 (279)
.+|.=||+|. | .++..|++.. +..++++.|. ++ .++..++. .+.+. .|..+....+|+|++.- ++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~--G~~~~-~~~~e~~~~aDvVilav-----~~ 94 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKM--GVKLT-PHNKETVQHSDVLFLAV-----KP 94 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHH--TCEEE-SCHHHHHHHCSEEEECS-----CG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHc--CCEEe-CChHHHhccCCEEEEEe-----CH
Confidence 4688898864 2 3344444442 1146888987 43 44444322 23322 12111122589988843 56
Q ss_pred hHHHHHHHHHHHhCC
Q 023625 188 EESVKLLKKCKEAIP 202 (279)
Q Consensus 188 ~~~~~~L~~~~~~L~ 202 (279)
+....+++.+...++
T Consensus 95 ~~~~~vl~~l~~~l~ 109 (322)
T 2izz_A 95 HIIPFILDEIGADIE 109 (322)
T ss_dssp GGHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHhhcC
Confidence 677888999988888
No 482
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=28.06 E-value=99 Score=25.03 Aligned_cols=33 Identities=18% Similarity=0.111 Sum_probs=21.8
Q ss_pred CCCEEEEecCCccHHHHHHHHHCCCCeEEEeeC
Q 023625 113 GLKSLVDVAGGTGIMARAIATAFPDIKCTVFDL 145 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 145 (279)
.+.+||=||||.-.....-.-.--+++++++|.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcC
Confidence 467899999987655554332334577888874
No 483
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=28.03 E-value=32 Score=28.67 Aligned_cols=100 Identities=11% Similarity=0.028 Sum_probs=47.5
Q ss_pred CCEEEEec-CCc-cHHHHHHHHHCC-CCeEEEeeChhHHhhc----ccCCC-CeEEeeC--CCCCCCCccceeeehhhhc
Q 023625 114 LKSLVDVA-GGT-GIMARAIATAFP-DIKCTVFDLPHVVDNL----QGTND-NLDFLGG--NMFEAIPQANAVLLKWILH 183 (279)
Q Consensus 114 ~~~vlDvG-~G~-G~~~~~l~~~~p-~~~~~~~D~~~~~~~a----~~~~~-ri~~~~~--d~~~~~~~~D~v~~~~vlh 183 (279)
..+|+=+| +|. |......+...+ ..+++++|+.+....+ ..... ++....+ |+.+...++|+|+...-..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence 45899999 455 666554444433 1468889973222111 11111 3333222 3222345688888764332
Q ss_pred cCC-h--h----HHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 184 NWN-D--E----ESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 184 ~~~-~--~----~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.-+ . . ....+++++.+.++..+|+++++++
T Consensus 88 ~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~ 124 (326)
T 1smk_A 88 RKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLI 124 (326)
T ss_dssp CCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE
Confidence 211 1 1 1124444444443221157877774
No 484
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=28.01 E-value=1.7e+02 Score=25.55 Aligned_cols=96 Identities=15% Similarity=0.196 Sum_probs=51.3
Q ss_pred CCCEEEEecCCccHH--HHHHHHHCCCCeEEEeeC-hhHHhhcccC------------------CCCeEEeeCCCCCCCC
Q 023625 113 GLKSLVDVAGGTGIM--ARAIATAFPDIKCTVFDL-PHVVDNLQGT------------------NDNLDFLGGNMFEAIP 171 (279)
Q Consensus 113 ~~~~vlDvG~G~G~~--~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------------~~ri~~~~~d~~~~~~ 171 (279)
+..+|-=||.|.=.. +..|+++ +.+++++|. ++.++..++. ..++.+. .|+.+...
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-td~~ea~~ 83 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-TDLAEGVK 83 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHHHHT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-CCHHHHHh
Confidence 445777787764222 2233333 568999998 6666655431 1223322 22211223
Q ss_pred ccceeeehh--hh---ccCCh-hHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 023625 172 QANAVLLKW--IL---HNWND-EESVKLLKKCKEAIPSKDEGGKVIIIDM 215 (279)
Q Consensus 172 ~~D~v~~~~--vl---h~~~~-~~~~~~L~~~~~~L~~~~pgG~lli~e~ 215 (279)
.+|+|++.= .. +.-+| ....++++.+.+.|+ + |.++|...
T Consensus 84 ~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~---~-g~iVV~~S 129 (446)
T 4a7p_A 84 DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLT---K-PSVIVTKS 129 (446)
T ss_dssp TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCC---S-CCEEEECS
T ss_pred cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcC---C-CCEEEEeC
Confidence 578888752 11 00011 146778889999998 3 45555554
No 485
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=27.85 E-value=2e+02 Score=25.08 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=26.6
Q ss_pred CEEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hhHHhhcc
Q 023625 115 KSLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PHVVDNLQ 153 (279)
Q Consensus 115 ~~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~a~ 153 (279)
.+|.=||+|. |. ++..|++..++.+++++|. ++.++..+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~ 47 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWN 47 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHT
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHh
Confidence 4788888874 33 4455666655678999998 66666543
No 486
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=27.82 E-value=1.7e+02 Score=23.76 Aligned_cols=56 Identities=7% Similarity=0.163 Sum_probs=29.5
Q ss_pred CCeEEeeCCCCCCCCccceeeehhhhccCC---hh----HHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 157 DNLDFLGGNMFEAIPQANAVLLKWILHNWN---DE----ESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 157 ~ri~~~~~d~~~~~~~~D~v~~~~vlh~~~---~~----~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.++++..++ .+...++|+|+...-...-+ .. ....+++++.+.++..+|+++++++
T Consensus 56 ~~~~v~~~~-~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~ 118 (303)
T 1o6z_A 56 SNTRVRQGG-YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTT 118 (303)
T ss_dssp CCCEEEECC-GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred CCcEEEeCC-HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEe
Confidence 455666554 33456789988765432211 11 1224555555555332368887774
No 487
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=27.81 E-value=88 Score=25.95 Aligned_cols=101 Identities=11% Similarity=0.091 Sum_probs=49.4
Q ss_pred CCCCEEEEecCCccHHHHH--HHHHCCCCeEEEeeC-hhHHhh-ccc------CCCCeEEeeCCCCCCCCccceeeehhh
Q 023625 112 EGLKSLVDVAGGTGIMARA--IATAFPDIKCTVFDL-PHVVDN-LQG------TNDNLDFLGGNMFEAIPQANAVLLKWI 181 (279)
Q Consensus 112 ~~~~~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~-~~~~~~-a~~------~~~ri~~~~~d~~~~~~~~D~v~~~~v 181 (279)
....+|.=+|+|.=..+.. ++...--..++.+|+ ++.++. +.. ...++.+..++ .+...++|+|++..-
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~-~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAE-YSDAKDADLVVITAG 85 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-GGGGGGCSEEEECCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECC-HHHhCCCCEEEEcCC
Confidence 3456899999854333222 222221236899998 433322 111 11355555533 334567999987643
Q ss_pred hccCC---hh----HHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 182 LHNWN---DE----ESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 182 lh~~~---~~----~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.-.-+ .. ....+++.+.+.++...|+++++++
T Consensus 86 ~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 124 (326)
T 2zqz_A 86 APQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA 124 (326)
T ss_dssp CC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 21111 00 1224455555444211168988885
No 488
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=27.03 E-value=98 Score=25.34 Aligned_cols=98 Identities=9% Similarity=0.090 Sum_probs=46.1
Q ss_pred CEEEEecCCccHHHH-HHHHHCCCCeEEEeeC-hhHHhh-ccc-------CCCCeEEee-CCCCCCCCccceeeehhhhc
Q 023625 115 KSLVDVAGGTGIMAR-AIATAFPDIKCTVFDL-PHVVDN-LQG-------TNDNLDFLG-GNMFEAIPQANAVLLKWILH 183 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~-~l~~~~p~~~~~~~D~-~~~~~~-a~~-------~~~ri~~~~-~d~~~~~~~~D~v~~~~vlh 183 (279)
.+|.=||+|.=.... ..+...+...++++|+ ++.++. +.. .....++.. .|+ +...++|+|+..--.-
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 367788875422222 2222333346899998 433321 111 112333333 565 5566799998763111
Q ss_pred cCCh-------hHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 184 NWND-------EESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 184 ~~~~-------~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
.-+. .....+++++.+.+....|++.++++
T Consensus 82 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~ 118 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV 118 (309)
T ss_dssp -------CHHHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEc
Confidence 0000 12234555555544322257877764
No 489
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=26.89 E-value=1.5e+02 Score=24.34 Aligned_cols=65 Identities=12% Similarity=0.078 Sum_probs=35.2
Q ss_pred CCEEEEecCCccH--HHHHHHHHCCCCeEEEeeC-hhHHhh-ccc-------CCCCeEEeeCCCCCCCCccceeeeh
Q 023625 114 LKSLVDVAGGTGI--MARAIATAFPDIKCTVFDL-PHVVDN-LQG-------TNDNLDFLGGNMFEAIPQANAVLLK 179 (279)
Q Consensus 114 ~~~vlDvG~G~G~--~~~~l~~~~p~~~~~~~D~-~~~~~~-a~~-------~~~ri~~~~~d~~~~~~~~D~v~~~ 179 (279)
..+|.=||+|.=. ++..++.....-+++++|+ ++..+. +.. ....+.+...+ .+...++|+|++.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~-~~al~~aDvViia 81 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD-YDDCRDADLVVIC 81 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC-GGGTTTCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCc-HHHhCCCCEEEEc
Confidence 4688889985422 3333333333347999998 432221 111 11245555433 3346679999886
No 490
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=26.66 E-value=55 Score=26.79 Aligned_cols=31 Identities=26% Similarity=0.445 Sum_probs=25.7
Q ss_pred CEEEEecCCccHHHHH--HHHHCCCCeEEEeeC
Q 023625 115 KSLVDVAGGTGIMARA--IATAFPDIKCTVFDL 145 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~ 145 (279)
.-|+=||+|++.++.+ ++++.++.+++++|.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk 98 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 4599999999988877 555678899999985
No 491
>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}
Probab=26.63 E-value=32 Score=17.33 Aligned_cols=19 Identities=32% Similarity=0.758 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhCCCCCCCcEEE
Q 023625 190 SVKLLKKCKEAIPSKDEGGKVI 211 (279)
Q Consensus 190 ~~~~L~~~~~~L~~~~pgG~ll 211 (279)
|..+++++..+.+ .+|+++
T Consensus 4 cr~likriqa~ip---k~grml 22 (34)
T 1ssz_A 4 CRALIKRIQAMIP---KGGRML 22 (34)
T ss_dssp HHHHHHHHHHHCS---SSCCCC
T ss_pred HHHHHHHHHHHcc---ccchhh
Confidence 5678888888877 577653
No 492
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=26.63 E-value=1.7e+02 Score=24.23 Aligned_cols=101 Identities=13% Similarity=0.074 Sum_probs=50.5
Q ss_pred CCCEEEEecCCc-cH-HHHHHHHHCCCCeEEEeeC-hhHHhh-------ccc-CCCCeEEeeCCCCCCCCccceeeehhh
Q 023625 113 GLKSLVDVAGGT-GI-MARAIATAFPDIKCTVFDL-PHVVDN-------LQG-TNDNLDFLGGNMFEAIPQANAVLLKWI 181 (279)
Q Consensus 113 ~~~~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~-~~~~~~-------a~~-~~~ri~~~~~d~~~~~~~~D~v~~~~v 181 (279)
...+|.=||+|. |. ++..++...---+++++|. ++.++. +.. ...++.+..+|. +...++|+|++..-
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~-~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY-EDCKDADIVCICAG 82 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG-GGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH-HHhCCCCEEEEecc
Confidence 356788888643 22 2222333321127999998 433322 111 113455555553 34557899887543
Q ss_pred hccCC---hh----HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 182 LHNWN---DE----ESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 182 lh~~~---~~----~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
.-.-+ .. ....+++.+.+.+....|+++++++.
T Consensus 83 ~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 83 ANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 21111 11 12355555555553323788887765
No 493
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=26.59 E-value=97 Score=25.25 Aligned_cols=85 Identities=14% Similarity=0.309 Sum_probs=45.5
Q ss_pred EEEEecCCc-cH-HHHHHHHHCCCCeEEEeeChhHHhhcccCCCCeEEee--CCC-------CCC---CCccceeeehhh
Q 023625 116 SLVDVAGGT-GI-MARAIATAFPDIKCTVFDLPHVVDNLQGTNDNLDFLG--GNM-------FEA---IPQANAVLLKWI 181 (279)
Q Consensus 116 ~vlDvG~G~-G~-~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ri~~~~--~d~-------~~~---~~~~D~v~~~~v 181 (279)
+|.=||+|. |. ++..|++. +.++++++..+ .+..++. ++.+.. +++ ..+ ...+|+|++.-
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~-~~~i~~~--g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilav- 77 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD-YEAIAGN--GLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGL- 77 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT-HHHHHHT--CEEEEETTCCEEESCCCEESCHHHHCCCSEEEECC-
T ss_pred EEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc-HHHHHhC--CCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEec-
Confidence 577788664 33 33344443 35788888854 3444322 222211 111 111 23589988853
Q ss_pred hccCChhHHHHHHHHHHHhCCCCCCCcEEEEE
Q 023625 182 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIII 213 (279)
Q Consensus 182 lh~~~~~~~~~~L~~~~~~L~~~~pgG~lli~ 213 (279)
+..+...+++.+.+.++ |+..++.+
T Consensus 78 ----k~~~~~~~l~~l~~~l~---~~~~iv~l 102 (312)
T 3hn2_A 78 ----KTFANSRYEELIRPLVE---EGTQILTL 102 (312)
T ss_dssp ----CGGGGGGHHHHHGGGCC---TTCEEEEC
T ss_pred ----CCCCcHHHHHHHHhhcC---CCCEEEEe
Confidence 33334567888888898 56655543
No 494
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=26.29 E-value=63 Score=27.93 Aligned_cols=30 Identities=20% Similarity=0.164 Sum_probs=23.8
Q ss_pred EEEEecCCccHHHHH--HHHHCCCCeEEEeeC
Q 023625 116 SLVDVAGGTGIMARA--IATAFPDIKCTVFDL 145 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~--l~~~~p~~~~~~~D~ 145 (279)
+|+=||+|.+.++.+ +.+..++.+++++|.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~ 33 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEK 33 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 588899999877654 666778888998875
No 495
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=26.28 E-value=74 Score=26.15 Aligned_cols=88 Identities=13% Similarity=0.151 Sum_probs=47.7
Q ss_pred CccHHHHHHHHHCCCCeEEEeeChhHHhhcc----cCCCCeEEe-eCCCCCCC--Cccceeeehh----hhccCC--hhH
Q 023625 123 GTGIMARAIATAFPDIKCTVFDLPHVVDNLQ----GTNDNLDFL-GGNMFEAI--PQANAVLLKW----ILHNWN--DEE 189 (279)
Q Consensus 123 G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~----~~~~ri~~~-~~d~~~~~--~~~D~v~~~~----vlh~~~--~~~ 189 (279)
+.|.+. .++.+.++-++.+++.+-.+..-+ ...+..++. .+||..|. +.+|+|++.. .-|++. .+.
T Consensus 151 ~~~~~~-~~~~k~~g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DH 229 (320)
T 2hwk_A 151 PQSDFS-SFVSKLKGRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDH 229 (320)
T ss_dssp CCCCCH-HHHHTSSCSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHH
T ss_pred CCCCHH-HHHhhCCCcEEEEEecccccCCceeEeeccCCCceeecccccCCccccCcCCEEEEcCCCCCCCccccccchH
Confidence 344443 356667777766665332222111 012344555 67887752 3599999843 223312 111
Q ss_pred H---HHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 190 S---VKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 190 ~---~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
+ .-+++.+.+.|+ |||.+++--
T Consensus 230 arii~Lal~fA~~vLk---PGGtfV~Kv 254 (320)
T 2hwk_A 230 AIKLSMLTKKACLHLN---PGGTCVSIG 254 (320)
T ss_dssp HHHHHHTHHHHGGGEE---EEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcC---CCceEEEEE
Confidence 1 125667778899 799988743
No 496
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=26.28 E-value=65 Score=27.90 Aligned_cols=66 Identities=12% Similarity=0.187 Sum_probs=39.1
Q ss_pred CCEEEEecCCccHHHHHH----HHHC---CCCeEEEeeC-hhHHhhccc-----CCCCeEEee-CCCCCCCCccceeeeh
Q 023625 114 LKSLVDVAGGTGIMARAI----ATAF---PDIKCTVFDL-PHVVDNLQG-----TNDNLDFLG-GNMFEAIPQANAVLLK 179 (279)
Q Consensus 114 ~~~vlDvG~G~G~~~~~l----~~~~---p~~~~~~~D~-~~~~~~a~~-----~~~ri~~~~-~d~~~~~~~~D~v~~~ 179 (279)
..+|.=||+|++ ++..+ +.+. |..+++.+|+ ++.++.+.. ....+++.. .|..+...++|+|+..
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viit 80 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQ 80 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEc
Confidence 357888999997 66654 5422 3457999999 544333221 011255554 4543445678988875
Q ss_pred h
Q 023625 180 W 180 (279)
Q Consensus 180 ~ 180 (279)
.
T Consensus 81 a 81 (417)
T 1up7_A 81 F 81 (417)
T ss_dssp C
T ss_pred C
Confidence 4
No 497
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=26.05 E-value=96 Score=25.38 Aligned_cols=65 Identities=8% Similarity=0.049 Sum_probs=32.2
Q ss_pred EEEEecCCccHHHH--HHHHHCCCCeEEEeeC-hhHHhhcc----c----CCCCeEEee-CCCCCCCCccceeeehhh
Q 023625 116 SLVDVAGGTGIMAR--AIATAFPDIKCTVFDL-PHVVDNLQ----G----TNDNLDFLG-GNMFEAIPQANAVLLKWI 181 (279)
Q Consensus 116 ~vlDvG~G~G~~~~--~l~~~~p~~~~~~~D~-~~~~~~a~----~----~~~ri~~~~-~d~~~~~~~~D~v~~~~v 181 (279)
+|.=||+|.=..+. .+++.....+++++|. ++.++... . ......+.. .|.. ...++|+|++.--
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~-~l~~aDvViiav~ 78 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYA-DTANSDIVIITAG 78 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGG-GGTTCSEEEECCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHH-HHCCCCEEEEeCC
Confidence 56677875433222 2222212467999998 44333211 0 011223322 4442 3557899987653
No 498
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=25.89 E-value=1.1e+02 Score=25.14 Aligned_cols=97 Identities=8% Similarity=0.135 Sum_probs=48.5
Q ss_pred EEEEecCCccHHHHH----HHHHCCCCeEEEeeC-hhHHhh-ccc-------CCCCeEEeeCCCCCCCCccceeeehhhh
Q 023625 116 SLVDVAGGTGIMARA----IATAFPDIKCTVFDL-PHVVDN-LQG-------TNDNLDFLGGNMFEAIPQANAVLLKWIL 182 (279)
Q Consensus 116 ~vlDvG~G~G~~~~~----l~~~~p~~~~~~~D~-~~~~~~-a~~-------~~~ri~~~~~d~~~~~~~~D~v~~~~vl 182 (279)
+|.=+|+| ..+.. ++...---.++++|. +..++. +.. ...++.+...+-.+...++|+|++..-.
T Consensus 2 kv~ViGaG--~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~ 79 (314)
T 3nep_X 2 KVTVIGAG--NVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGL 79 (314)
T ss_dssp EEEEECCS--HHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCC
Confidence 45667764 33333 333321127899998 432221 111 1123444433434456679998886432
Q ss_pred ccCC---h----hHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 023625 183 HNWN---D----EESVKLLKKCKEAIPSKDEGGKVIIID 214 (279)
Q Consensus 183 h~~~---~----~~~~~~L~~~~~~L~~~~pgG~lli~e 214 (279)
-.-+ . .....+++.+.+.+....|++.++++.
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 80 PRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred CCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 2111 1 123466676666664444789887755
No 499
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=25.84 E-value=78 Score=23.97 Aligned_cols=62 Identities=19% Similarity=0.299 Sum_probs=40.5
Q ss_pred CEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHHhhcccCCCCeEEeeCCCCCC------CCccceeeehh
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVVDNLQGTNDNLDFLGGNMFEA------IPQANAVLLKW 180 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~ri~~~~~d~~~~------~~~~D~v~~~~ 180 (279)
.+||=. ||+|..+.+++++. .+.++++++. +... .....+++++.+|+.++ ..+.|+|+...
T Consensus 5 ~~ilIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 5 KKIVLI-GASGFVGSALLNEALNRGFEVTAVVRHPEKI---KIENEHLKVKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CEEEEE-TCCHHHHHHHHHHHHTTTCEEEEECSCGGGC---CCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CEEEEE-cCCchHHHHHHHHHHHCCCEEEEEEcCcccc---hhccCceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 456644 56777777777654 3468999988 4322 22237899999999873 13578877643
No 500
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=25.64 E-value=2.8e+02 Score=22.81 Aligned_cols=64 Identities=16% Similarity=0.186 Sum_probs=37.9
Q ss_pred CEEEEecCCccHHHHHHHHHC--CCCeEEEeeC-hhHH--hhcccCCCCeEEeeCC-CCCC--C----Cccceeeehh
Q 023625 115 KSLVDVAGGTGIMARAIATAF--PDIKCTVFDL-PHVV--DNLQGTNDNLDFLGGN-MFEA--I----PQANAVLLKW 180 (279)
Q Consensus 115 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~--~~a~~~~~ri~~~~~d-~~~~--~----~~~D~v~~~~ 180 (279)
.+|+=. |++|..+.+++++. .+.++++++. +... ..... ..+++++.+| +.++ . .+.|+|+...
T Consensus 6 ~~ilVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a 81 (352)
T 1xgk_A 6 KTIAVV-GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA-IPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT 81 (352)
T ss_dssp CCEEEE-STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT-STTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CEEEEE-CCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh-cCCcEEEECCccCCHHHHHHHHhcCCEEEEcC
Confidence 355544 66777777776654 3467888876 3222 11111 2478999999 7653 1 3578877543
Done!