Your job contains 1 sequence.
>023626
MLHSLHLPIVSSYSSDKSSNPPSFSSSQNPPLYLKFKTSHRENLRYLRAIGVIDPSTKPH
KLPSPEVVSQILSTIDFFKSKGLTNGHFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLH
ASVEERRGLIIGCPQMLSSNVEYCLKPTLDYLTKLGVKKLNVPSTLNARLLNTRVERLRE
TLRFLRSIGLNRREAAEFCARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFG
FSLGKRIAPRHWHLKQRNVRIKLNKMLLWSDNRFYTKWK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023626
(279 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087926 - symbol:AT3G18870 "AT3G18870" species... 793 6.8e-79 1
TAIR|locus:2062328 - symbol:AT2G34620 "AT2G34620" species... 364 2.0e-33 1
TAIR|locus:2056745 - symbol:EMB93 "EMBRYO DEFECTIVE 93" s... 327 1.6e-29 1
TAIR|locus:2039240 - symbol:EMB3114 "AT2G36000" species:3... 270 1.8e-23 1
TAIR|locus:2207420 - symbol:AT1G78930 "AT1G78930" species... 236 5.9e-19 1
TAIR|locus:2049329 - symbol:EMB2219 "embryo defective 221... 212 2.7e-16 1
TAIR|locus:2162092 - symbol:AT5G55580 "AT5G55580" species... 186 2.1e-13 1
TAIR|locus:505006461 - symbol:MDA1 "AT4G14605" species:37... 177 1.5e-11 1
TAIR|locus:2051814 - symbol:AT2G44020 "AT2G44020" species... 163 1.1e-09 1
TAIR|locus:2153433 - symbol:PTAC15 "AT5G54180" species:37... 156 8.1e-09 1
TAIR|locus:2139394 - symbol:BSM "AT4G02990" species:3702 ... 148 8.4e-08 1
TAIR|locus:2037338 - symbol:AT1G74120 "AT1G74120" species... 124 3.8e-05 1
UNIPROTKB|G3V130 - symbol:MTERFD1 "mTERF domain-containin... 116 0.00015 1
UNIPROTKB|E2RL82 - symbol:MTERFD1 "Uncharacterized protei... 116 0.00028 1
UNIPROTKB|Q96E29 - symbol:MTERFD1 "mTERF domain-containin... 116 0.00028 1
UNIPROTKB|F1RY61 - symbol:MTERFD1 "Uncharacterized protei... 113 0.00062 1
TAIR|locus:2036843 - symbol:AT1G61960 "AT1G61960" species... 113 0.00072 1
TAIR|locus:2102827 - symbol:AT3G46950 "AT3G46950" species... 105 0.00073 2
TAIR|locus:2018057 - symbol:AT1G62120 "AT1G62120" species... 112 0.00088 1
>TAIR|locus:2087926 [details] [associations]
symbol:AT3G18870 "AT3G18870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016556 "mRNA modification" evidence=RCA]
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP002039
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000239190 EMBL:BT029467 IPI:IPI00540238
RefSeq:NP_188517.1 UniGene:At.21618 UniGene:At.71275
ProteinModelPortal:Q9LHN2 SMR:Q9LHN2 EnsemblPlants:AT3G18870.1
GeneID:821420 KEGG:ath:AT3G18870 TAIR:At3g18870 eggNOG:NOG268043
InParanoid:Q9LHN2 OMA:PAIFGYS PhylomeDB:Q9LHN2
ProtClustDB:CLSN2684540 Genevestigator:Q9LHN2 Uniprot:Q9LHN2
Length = 274
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 147/248 (59%), Positives = 189/248 (76%)
Query: 32 LYLKFKTSHRENLRYLRAIGVIDPSTKPHKLPSPEVVSQILSTIDFFKSKGLTNGHFSRL 91
LYLKF+TSHRENLR+L ++G++ P P P +S ILS ++ KSKG+++ F RL
Sbjct: 28 LYLKFQTSHRENLRHLSSLGIV-PQN-PRLAPPANDLSVILSAVNLLKSKGISDEDFPRL 85
Query: 92 AYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLKPTLDY 151
+LCPQ FS FD S+++PVFDFL +L AS EE RGLI+ CP +L S+VEYCL+PTL Y
Sbjct: 86 VFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNILFSDVEYCLRPTLVY 145
Query: 152 LTKLGVKKLNVPSTLNARLLNTRVERLRETLRFLRSIGLNRREAAEFCARMPAIFGYNIE 211
L +LGV+ LN S NA +LNTRVE+LR +RFL+SIG EAA C R+PAIFGY++E
Sbjct: 146 LKELGVRNLNRASKTNAHVLNTRVEKLRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVE 205
Query: 212 HHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRHWHLKQRNVRIKLNKMLLWSD 271
+L+ KFEFL +MER LEELK+FPQYF FSLGKRI PRHWHLK++NVR+ L++ML+W D
Sbjct: 206 DNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGD 265
Query: 272 NRFYTKWK 279
+FY+KWK
Sbjct: 266 QKFYSKWK 273
>TAIR|locus:2062328 [details] [associations]
symbol:AT2G34620 "AT2G34620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004077 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545404
PIR:H84758 RefSeq:NP_181009.1 UniGene:At.37779
ProteinModelPortal:O64685 SMR:O64685 STRING:O64685 PaxDb:O64685
PRIDE:O64685 EnsemblPlants:AT2G34620.1 GeneID:818027
KEGG:ath:AT2G34620 TAIR:At2g34620 eggNOG:NOG301834
HOGENOM:HOG000239190 InParanoid:O64685 OMA:RCPALFT PhylomeDB:O64685
ProtClustDB:CLSN2683649 Genevestigator:O64685 Uniprot:O64685
Length = 303
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 85/208 (40%), Positives = 120/208 (57%)
Query: 68 VSQILSTIDFFKSKGLTNGHFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERR 127
+ I S + F +SKG+ R+ +CP+ + + +E+ PVF FL DLH R
Sbjct: 84 LDSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSDVR-TELYPVFMFLSNDLHVPENAFR 142
Query: 128 GLIIGCPQMLSSNVEYCLKPTLDYLTKLGVKKLNVPSTLNARLLNTRVER-LRETLRFLR 186
+I CP++L S+VE LKP L YL +LG+K L + + LL + VE L LRFL
Sbjct: 143 RVIKKCPRLLISSVEDQLKPALFYLQRLGLKDLEALAYQDPILLVSSVEHTLIPKLRFLE 202
Query: 187 SIGLNRREAAEFCARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKR 246
SIG +R EA R PA+F ++IE++ K K ++ E++ LE LKEFPQYF FSL KR
Sbjct: 203 SIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKR 262
Query: 247 IAPRHWHLKQRNVRIKLNKMLLWSDNRF 274
I PRH +R + + L+ ML +D F
Sbjct: 263 IKPRHLESMERGLELPLSLMLKSTDEEF 290
>TAIR|locus:2056745 [details] [associations]
symbol:EMB93 "EMBRYO DEFECTIVE 93" species:3702
"Arabidopsis thaliana" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0071452 "cellular
response to singlet oxygen" evidence=IGI] GO:GO:0009507
EMBL:CP002685 GO:GO:0009793 GO:GO:0071452 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AY219044
EMBL:AY649248 IPI:IPI00531063 RefSeq:NP_178405.2 UniGene:At.41435
ProteinModelPortal:Q84X53 SMR:Q84X53 PRIDE:Q84X53
EnsemblPlants:AT2G03050.1 GeneID:814834 KEGG:ath:AT2G03050
TAIR:At2g03050 InParanoid:Q84X53 OMA:ELAEFPH PhylomeDB:Q84X53
ProtClustDB:CLSN2681137 Genevestigator:Q84X53 Uniprot:Q84X53
Length = 283
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 86/243 (35%), Positives = 129/243 (53%)
Query: 41 RENLRYLRAIGVIDPSTKPHKLPS--PEVVSQILSTIDFFKSKGLTNGHFSRLAYLCPQF 98
RE L YL+ + V DP PS +S ++S S GL+ R+ + P
Sbjct: 33 REKLIYLQDLNV-DPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL 91
Query: 99 FSINFDP-SEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLKPTLDYLTKLGV 157
+ DP SEI PV FL ++ S ++ I CP++L S+V+Y L+P L +L LG
Sbjct: 92 --LTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGF 149
Query: 158 KKLNVPSTLNARLLNTRVER-LRETLRFLRS-IGLNRREAAEFCARMPAIFGYNIEHHLK 215
+ ++ N LL + VER L + +L +G R E A+ R PA+ Y+++++L
Sbjct: 150 VGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLV 209
Query: 216 IKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRHWHLKQRNVRIKLNKMLLWSDNRFY 275
K EF EM ++ELK FPQYF FSL ++I PRH LK+ + + L++ML SD +F
Sbjct: 210 PKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF- 268
Query: 276 TKW 278
W
Sbjct: 269 NHW 271
>TAIR|locus:2039240 [details] [associations]
symbol:EMB3114 "AT2G36000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AY039871
EMBL:AY039888 EMBL:AY077666 IPI:IPI00529913 PIR:F84775
RefSeq:NP_850257.1 UniGene:At.21750 ProteinModelPortal:Q9SJ50
EnsemblPlants:AT2G36000.1 GeneID:818173 KEGG:ath:AT2G36000
TAIR:At2g36000 HOGENOM:HOG000149144 InParanoid:Q9SJ50 OMA:PTLYFLQ
PhylomeDB:Q9SJ50 ProtClustDB:CLSN2680066 Genevestigator:Q9SJ50
Uniprot:Q9SJ50
Length = 333
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 77/244 (31%), Positives = 129/244 (52%)
Query: 37 KTSHRENLRYLRAIGVIDPSTKPHKLPS--PEVVSQILSTIDFFKSKGL--TNGHFSRLA 92
++S E L YL ++G ID T ++ P +S + S +D+ + + T F RL
Sbjct: 70 ESSIHEKLIYLDSLG-IDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLV 128
Query: 93 YLCPQFFSINFDPSEIEPVFDFLITDLHA-SVEERRGLIIGCPQMLSSNVEYCLKPTLDY 151
+CP+ + I PV FL+ ++ S+ + R + P++L+ +V++ L+PTL +
Sbjct: 129 SMCPELLTSPLTSHTI-PVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYF 187
Query: 152 LTKLGVKKLNVPSTLNARLLNTRVE-RLRETLRFLRSIGLNRREAAEFCARMPAIFGYNI 210
L ++G+ L+ P + LL+ V+ +L + + +G +RR A R P +F Y+I
Sbjct: 188 LQRIGI--LD-PHK-HTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSI 243
Query: 211 EHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRHWHLKQRNVRIKLNKMLLWS 270
+ + K ++L VEM R + E+ EFPQYF FSL RI PRH + VR L ML +
Sbjct: 244 AENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTN 303
Query: 271 DNRF 274
+ F
Sbjct: 304 EAGF 307
>TAIR|locus:2207420 [details] [associations]
symbol:AT1G78930 "AT1G78930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] EMBL:CP002684
GO:GO:0009507 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AK228193 IPI:IPI00543979 RefSeq:NP_178014.2
UniGene:At.34214 ProteinModelPortal:Q0WRV2 SMR:Q0WRV2 PRIDE:Q0WRV2
EnsemblPlants:AT1G78930.1 GeneID:844232 KEGG:ath:AT1G78930
TAIR:At1g78930 HOGENOM:HOG000084735 InParanoid:Q0WRV2 OMA:PHILGCS
PhylomeDB:Q0WRV2 ProtClustDB:CLSN2680664 Genevestigator:Q0WRV2
Uniprot:Q0WRV2
Length = 591
Score = 236 (88.1 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 63/200 (31%), Positives = 98/200 (49%)
Query: 78 FKSKGLTNGHFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQML 137
F G+ + ++ PQ P E V FL DL E ++ CP++
Sbjct: 378 FDKLGVRDKRMGKVIPKMPQLLLCK--PQEFLKVVCFL-EDLGFQKEIVGQILCRCPEIF 434
Query: 138 SSNVEYCLKPTLDYLTKLGVKKLNVPSTLNAR---LLNTRVERLRETLRFLRSIGLNRRE 194
++E L+ L +LT+ GV + P + L+ + + L++L IG++ RE
Sbjct: 435 GCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISERE 494
Query: 195 AAEFCARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRHWHL 254
A + I GY+I+ L+ KFEFL ME+ + E+ E+P+YF +SL KRI PR L
Sbjct: 495 IAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSLEKRIKPRFRVL 554
Query: 255 KQRNVRIKLNKMLLWSDNRF 274
K RN+ L +ML +D F
Sbjct: 555 KGRNIECTLQEMLGKNDEEF 574
>TAIR|locus:2049329 [details] [associations]
symbol:EMB2219 "embryo defective 2219" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] GO:GO:0009506 GO:GO:0009507
EMBL:CP002685 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 IPI:IPI00895653 RefSeq:NP_179763.3 UniGene:At.39539
ProteinModelPortal:F4IHL3 PRIDE:F4IHL3 EnsemblPlants:AT2G21710.1
GeneID:816708 KEGG:ath:AT2G21710 OMA:EMIADFP ArrayExpress:F4IHL3
Uniprot:F4IHL3
Length = 641
Score = 212 (79.7 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 61/252 (24%), Positives = 122/252 (48%)
Query: 33 YLKFKTSHRENLRYLRAIGVIDPST------KPHKLPSPEVVSQILSTIDFFKSKGLTNG 86
+ F+ ++ + YL+ G+ KPH L + + + +F G+
Sbjct: 346 FFSFQVMEKK-INYLKEFGLSTEEVGRLLAYKPH-LMGCSIEERWKPLVKYFYYLGIPKE 403
Query: 87 HFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLK 146
R+ + P + I+ + + I P FL ++ E +++ P +L++++ ++
Sbjct: 404 GMKRILVVKPILYCIDLEKT-IAPKVRFL-QEMGIPNEAIGNMLVKFPSLLTNSLYKKIR 461
Query: 147 PTLDYL-TKLGVKKLNVPSTL--NARLLNTRV-ERLRETLRFLRSIGLNRREAAEFCARM 202
P + +L T+ GV + ++ + + LL + +L +R+ S+G+ + E A
Sbjct: 462 PVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADF 521
Query: 203 PAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRHWHLKQRNVRIK 262
P + YN+++ L+ K+ +L M R L++L EFP++F +SL +RI PRH + + V K
Sbjct: 522 PMLLRYNVDN-LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFK 580
Query: 263 LNKMLLWSDNRF 274
L ML +D F
Sbjct: 581 LRYMLACTDEEF 592
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 44/215 (20%), Positives = 92/215 (42%)
Query: 65 PEVVS----QILSTIDFFKSKGLTNGHFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLH 120
PE++S ++ S +DFF G+ F + Y P+ F +E ++L +
Sbjct: 306 PELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGF-FSFQVMEKKINYL-KEFG 363
Query: 121 ASVEERRGLIIGCPQMLSSNVEYCLKPTLDYLTKLGVKKLNVPSTLNAR--LLNTRVER- 177
S EE L+ P ++ ++E KP + Y LG+ K + L + L +E+
Sbjct: 364 LSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKT 423
Query: 178 LRETLRFLRSIGLNRREAAEFCARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEF-- 235
+ +RFL+ +G+ + P++ ++ ++ FL + +++ +
Sbjct: 424 IAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIA 483
Query: 236 --PQYFGFSLGKRIAPRHWHLKQRNVRI-KLNKML 267
P G S+G ++ P + +R +L +M+
Sbjct: 484 MDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMI 518
>TAIR|locus:2162092 [details] [associations]
symbol:AT5G55580 "AT5G55580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0048364 GO:GO:0048367
EMBL:AB009050 eggNOG:NOG246142 KO:K15032 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 UniGene:At.27411 EMBL:AY062691
EMBL:BT000141 IPI:IPI00542422 RefSeq:NP_200369.1
ProteinModelPortal:Q9FM80 SMR:Q9FM80 PRIDE:Q9FM80
EnsemblPlants:AT5G55580.1 GeneID:835652 KEGG:ath:AT5G55580
TAIR:At5g55580 HOGENOM:HOG000084463 InParanoid:Q9FM80 OMA:RPRHRFL
PhylomeDB:Q9FM80 ProtClustDB:CLSN2686991 ArrayExpress:Q9FM80
Genevestigator:Q9FM80 Uniprot:Q9FM80
Length = 496
Score = 186 (70.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 61/253 (24%), Positives = 117/253 (46%)
Query: 39 SHRENLRYLRAIGVIDPSTKPHKLPSPEVV-----SQILSTIDFFKSKGLTNGHFSRLAY 93
S +E L YL ++GV K L P+++ + + + I F G+ N ++
Sbjct: 218 SAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVA 277
Query: 94 LCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLKPTLDYLT 153
P FS + + S + P +LI ++ + ++ PQ+L ++ +L+
Sbjct: 278 ATPSLFSYSVENS-LRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLS 336
Query: 154 K-LGVKKLNVPSTL--NARLLNTRVER-LRETLRFLRSIGLNRREAAEFCARMPAIFGYN 209
K LG + +V + + +LL+ ++ + FLRSIG+ + + + + +
Sbjct: 337 KELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLS 396
Query: 210 IEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRHWHLKQ-RNVR---IKLNK 265
+E +LK K+ +L E+ + L ++P Y SL +RI PRH L + + VR L+
Sbjct: 397 LEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGPFPLSS 456
Query: 266 MLLWSDNRFYTKW 278
L+ +D F +W
Sbjct: 457 -LVPNDESFCQQW 468
>TAIR|locus:505006461 [details] [associations]
symbol:MDA1 "AT4G14605" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006970 "response to osmotic
stress" evidence=IMP] [GO:0009651 "response to salt stress"
evidence=IMP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
GO:GO:0009737 EMBL:CP002687 GO:GO:0009651 GO:GO:0009658 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00532745
RefSeq:NP_567435.4 UniGene:At.33263 ProteinModelPortal:F4JVI3
SMR:F4JVI3 PRIDE:F4JVI3 EnsemblPlants:AT4G14605.1 GeneID:827109
KEGG:ath:AT4G14605 OMA:HLVSRLH PhylomeDB:F4JVI3 Uniprot:F4JVI3
Length = 493
Score = 177 (67.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 54/206 (26%), Positives = 104/206 (50%)
Query: 74 TIDFFKSKGLTNGHFSRLAYLCPQFFSINFDPSEIEPVFDFLI-TDLHASVEERRGLIIG 132
T+ F ++ G+ ++++ P + + ++ +FL T L EE+ G I+
Sbjct: 271 TMAFLETLGIDKNQWAKIISRFPAI--LTYSRQKLTSTVEFLSQTGL---TEEQIGRILT 325
Query: 133 -CPQMLSSNVEYCLKPTLDYLTKLGVKKLNVPSTLNA--RLLNTRVE-RLRETLRFLRSI 188
CP ++S +VE L+PT++Y L V +V L+ + +E L+ F
Sbjct: 326 RCPNIMSYSVEDKLRPTMEYFRSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEK 382
Query: 189 GLNRREAAEFCARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIA 248
G E +R A++ ++++ ++ K+++ M+ EL +FPQ+FG+SL +RI
Sbjct: 383 GFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQT-MDYPKSELVKFPQFFGYSLQERIK 441
Query: 249 PRHWHLKQRNVRIKLNKMLLWSDNRF 274
PR+ +++ VR+ LN++L S F
Sbjct: 442 PRYELVQRSGVRLLLNQVLSLSGIEF 467
Score = 139 (54.0 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 107 EIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLKPTLDYLTKLGVKK---LNVP 163
+I+PV +FL+ DL + ++ PQ+ ++ LKPT+ +L LG+ K +
Sbjct: 231 KIKPVVEFLL-DLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKII 289
Query: 164 STLNARLLNTRVERLRETLRFLRSIGLNRREAAEFCARMPAIFGYNIEHHLKIKFE-FLA 222
S A L +R ++L T+ FL GL + R P I Y++E L+ E F +
Sbjct: 290 SRFPAILTYSR-QKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRS 348
Query: 223 VEMERSLEELKEFPQYFGFSLGKRIAP 249
+ ++ ++ L PQ FG S+ + P
Sbjct: 349 LNVDVAVL-LHRCPQTFGLSIESNLKP 374
Score = 122 (48.0 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 43/193 (22%), Positives = 82/193 (42%)
Query: 70 QILSTIDFFKSKGLTNGHFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGL 129
++ ST++F GLT R+ CP S + + ++ P ++ L+ V L
Sbjct: 302 KLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVE-DKLRPTMEYF-RSLNVDVAV---L 356
Query: 130 IIGCPQMLSSNVEYCLKPTLDY-LTK-LGVKKLNVP-STLNARLLNTRVERLRETLRFLR 186
+ CPQ ++E LKP ++ L K G+ ++ + S A + E + + +
Sbjct: 357 LHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQ 416
Query: 187 SIGLNRREAAEFCARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKR 246
++ + E +F P FGY+++ +K ++E + R L L + G K
Sbjct: 417 TMDYPKSELVKF----PQFFGYSLQERIKPRYELVQRSGVRLL--LNQVLSLSGIEFEKV 470
Query: 247 IAPRHWHLKQRNV 259
+ + L NV
Sbjct: 471 VKKKMMKLVSNNV 483
Score = 116 (45.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 31/123 (25%), Positives = 63/123 (51%)
Query: 145 LKPTLDYLTKLGVKKLNVPSTLNAR--LLNTRV-ERLRETLRFLRSIGLNRREAAEFCAR 201
+KP +++L LG+ K ++P+ L R + + + L+ T+ FL ++G+++ + A+ +R
Sbjct: 232 IKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISR 291
Query: 202 MPAIFGYNIEHHLKIKFEFLA---VEMERSLEELKEFPQYFGFSLGKRIAPRHWHLKQRN 258
PAI Y+ L EFL+ + E+ L P +S+ ++ P + + N
Sbjct: 292 FPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLN 350
Query: 259 VRI 261
V +
Sbjct: 351 VDV 353
Score = 49 (22.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 32 LYLKFKTSHRENLRYLRAIGVIDPSTKP---HKLPSPEVVSQILSTIDFFKSKGLTNGHF 88
L+ + S R+ +R ++ S +P + + + + ++ + T+ FFK +GL+N
Sbjct: 27 LWFTGRLSFRQETNGIRLKNRVEFSPRPVPPNLIAAEKEEAKAVLTL-FFKKQGLSNSLS 85
Query: 89 SRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLKPT 148
SRL IN S++ D L++ LH SV + R L+ G ++ + + L P
Sbjct: 86 SRL---------IN--KSDL--FIDHLVSRLH-SVHKARYLV-G-RELTTLEIRDSLIPY 129
Query: 149 LDYL 152
L+ L
Sbjct: 130 LEQL 133
>TAIR|locus:2051814 [details] [associations]
symbol:AT2G44020 "AT2G44020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004005
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AY039920 EMBL:AY079380 IPI:IPI00516323 PIR:T00682
RefSeq:NP_566005.1 UniGene:At.19499 UniGene:At.71899
ProteinModelPortal:O80572 SMR:O80572 PaxDb:O80572 PRIDE:O80572
EnsemblPlants:AT2G44020.1 GeneID:819007 KEGG:ath:AT2G44020
TAIR:At2g44020 eggNOG:NOG235651 HOGENOM:HOG000241428
InParanoid:O80572 OMA:YFTYSLE PhylomeDB:O80572 ProtClustDB:PLN03196
ArrayExpress:O80572 Genevestigator:O80572 Uniprot:O80572
Length = 507
Score = 163 (62.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 71/256 (27%), Positives = 115/256 (44%)
Query: 32 LYLKFKTSHRENLRYLRAIGV----IDPSTKPHK-LPSPEVVSQILSTIDFFKSKGLTNG 86
L K + + ++ YL +IGV I P + L V + I +D+ S GL
Sbjct: 208 LGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKK 267
Query: 87 HFSRLAYLCPQFFSINFDPSE-IEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCL 145
+R+ L + + + ++ E ++P D LI+ E LI PQ+L V+ +
Sbjct: 268 IVARM--LEKRSYIVGYNLEETVKPNVDCLIS-FGVKKELLPLLIAQYPQILGLPVKAKM 324
Query: 146 KPTLDYLTKLGVKKLNVPSTLNARLLNT--RVERLRET-----LRFLRSIGLNRREAAEF 198
T Y L KL + AR++ ++ L++ + FL + A+
Sbjct: 325 S-TQQYFFSL---KLKIDPEGFARVVEKMPQIVSLKQNVIMKPIEFLLGRAFQVEDIAKM 380
Query: 199 CARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRHWHLKQRN 258
R P I +E +K + F EM R ++EL E+P+YF +SL RI PR+ L+ +
Sbjct: 381 VVRCPQILCSRVEL-MKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSKG 439
Query: 259 VRIKLNKMLLWSDNRF 274
+R LN L SD RF
Sbjct: 440 IRSSLNWFLNCSDQRF 455
>TAIR|locus:2153433 [details] [associations]
symbol:PTAC15 "AT5G54180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009295 "nucleoid" evidence=IDA] [GO:0009508
"plastid chromosome" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] EMBL:CP002688 GO:GO:0009507
EMBL:AB013387 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
GO:GO:0009508 EMBL:AY081343 EMBL:BT000254 IPI:IPI00519701
RefSeq:NP_200229.1 UniGene:At.29509 ProteinModelPortal:Q9FK23
PRIDE:Q9FK23 EnsemblPlants:AT5G54180.1 GeneID:835506
KEGG:ath:AT5G54180 TAIR:At5g54180 InParanoid:Q9FK23 OMA:DNIEMIC
PhylomeDB:Q9FK23 ProtClustDB:CLSN2686733 ArrayExpress:Q9FK23
Genevestigator:Q9FK23 Uniprot:Q9FK23
Length = 500
Score = 156 (60.0 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 54/210 (25%), Positives = 93/210 (44%)
Query: 68 VSQILSTIDFFKS-KGLTNGHFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEER 126
V + ++F KS GLT+ ++ ++ P S + + ++ P +FL +
Sbjct: 283 VEHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKE-RKLRPRIEFL-KECGFDSPGM 340
Query: 127 RGLIIGCPQMLSSNVEYCLKPTLDYLTKLGVK-KLNVPSTLNARLLNTRVERLRETLRFL 185
+ P +L+ + E L L +L K+G K + + + T + ++ +
Sbjct: 341 FKFLSKAPLILALS-ENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLY 399
Query: 186 RSIGLNRREAAEFCARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGK 245
S GL+ + + P + YN L+ K E+L M R +EEL FP + G+ L
Sbjct: 400 LSYGLSFEDILAMSTKHPQVLQYNYTS-LEEKLEYLIEYMGREVEELLAFPAFLGYKLDS 458
Query: 246 RIAPRHWH-LKQRNVRIKLNKMLLWSDNRF 274
RI R+ LK R + LNK+L S RF
Sbjct: 459 RIKHRYEEKLKSRGENMSLNKLLTVSAERF 488
>TAIR|locus:2139394 [details] [associations]
symbol:BSM "AT4G02990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0009536 "plastid" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0032502 "developmental
process" evidence=IMP] [GO:0042793 "transcription from plastid
promoter" evidence=IMP] [GO:0042794 "rRNA transcription from
plastid promoter" evidence=IMP] GO:GO:0009536 EMBL:CP002687
GO:GO:0008380 GO:GO:0009790 EMBL:AF069442 EMBL:AL161495 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000241428
ProtClustDB:PLN03196 IPI:IPI00547639 PIR:T01394 RefSeq:NP_192208.1
UniGene:At.10877 ProteinModelPortal:Q9ZT96 SMR:Q9ZT96 STRING:Q9ZT96
PRIDE:Q9ZT96 EnsemblPlants:AT4G02990.1 GeneID:828116
KEGG:ath:AT4G02990 TAIR:At4g02990 InParanoid:Q9ZT96 OMA:FPAFFTY
PhylomeDB:Q9ZT96 ArrayExpress:Q9ZT96 Genevestigator:Q9ZT96
GO:GO:0042794 Uniprot:Q9ZT96
Length = 541
Score = 148 (57.2 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 57/255 (22%), Positives = 110/255 (43%)
Query: 32 LYLKFKTSHRENLRYLRAIGVIDPSTKPHKLPSPEV----VSQILST-IDFFKSKGLTNG 86
L K + + ++ YL IGV PE+ V++I+ +++ + G+
Sbjct: 243 LGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRL 302
Query: 87 HFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLK 146
+RL P D + ++P L D + +I P+++ + LK
Sbjct: 303 AAARLIEKRPHILGFELDDT-VKPNVQIL-QDFNVRETSLPSIIAQYPEIIGID----LK 356
Query: 147 PTLDYLTKLGVKKLNV-PSTLNA------RLLNTRVERLRETLRFLRSIGLNRREAAEFC 199
P LD KL +++ P L + + ++ + + + FL G + + E
Sbjct: 357 PKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMV 416
Query: 200 ARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRHWHLKQRNV 259
P + N+ +K+ FE+ EM+R L++L +FP +F + L + PRH + ++ +
Sbjct: 417 IGCPQVLALNLGI-MKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGI 475
Query: 260 RIKLNKMLLWSDNRF 274
+ L ML SD +F
Sbjct: 476 KCSLAWMLNCSDEKF 490
>TAIR|locus:2037338 [details] [associations]
symbol:AT1G74120 "AT1G74120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AC079678 IPI:IPI00521430 PIR:C96769
RefSeq:NP_565080.1 UniGene:At.66135 ProteinModelPortal:Q9C6A1
PRIDE:Q9C6A1 EnsemblPlants:AT1G74120.1 GeneID:843752
KEGG:ath:AT1G74120 TAIR:At1g74120 HOGENOM:HOG000006334
InParanoid:Q9C6A1 OMA:FRAGFEV PhylomeDB:Q9C6A1
ProtClustDB:CLSN2689192 ArrayExpress:Q9C6A1 Genevestigator:Q9C6A1
Uniprot:Q9C6A1
Length = 445
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 55/216 (25%), Positives = 101/216 (46%)
Query: 42 ENLRYLRAIGVIDPSTKPHKLPS-PEVVS----QILSTIDFFKSKGLTNGHFSRLAYLCP 96
E +R L+++G D ST L S P V+ +I I+F G+ + R ++ P
Sbjct: 149 ECVRVLKSLGFCD-STVSRILSSFPGVLLVNEIEIRRKIEFLVGIGIARDNIERFFHVFP 207
Query: 97 QFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLKPTLDYLTKLG 156
+ I + + ++P+ D + + S ++ + I P++L + L L+ + L
Sbjct: 208 EVLGIGTE-TRLKPLLDEFMK-MGFSKDDVKKEIAREPRVLGLELGE-LPRCLELINTLK 264
Query: 157 VKKLNVPSTLNARLLNTRVE-RLRETLRFLRSIGLNRREAAEFCARMPAIFGYNIEHHLK 215
+++ S ++ E +LR + L GL RR+A + + P + Y IE ++
Sbjct: 265 CREVIRVSIISEGAFRAGFEVKLR--VDCLCKYGLIRRDAFKVVWKEPRVILYEIED-IE 321
Query: 216 IKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRH 251
K EFL M + L + P+Y G +L K+I PR+
Sbjct: 322 KKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRY 357
>UNIPROTKB|G3V130 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] GO:GO:0005739
EMBL:CH471060 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AP003465 UniGene:Hs.308613 HGNC:HGNC:24258
ProteinModelPortal:G3V130 SMR:G3V130 Ensembl:ENST00000522822
ArrayExpress:G3V130 Bgee:G3V130 Uniprot:G3V130
Length = 296
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 36/164 (21%), Positives = 76/164 (46%)
Query: 32 LYLKFKTSHRENLRYLRAIGVIDPS-----TKPHKLPSPEVVSQILSTIDFFKSKGLTNG 86
L L F+ ++ L +L+ +G+ D TK H + S E + + + + + SK +
Sbjct: 59 LRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFS-EDLENLKTRVAYLHSKNFSKA 117
Query: 87 HFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLK 146
+++ P F +NF ++ F +L SV++ R L++ P++L+ ++E +
Sbjct: 118 DVAQMVRKAP--FLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLEPVKE 175
Query: 147 PTLDYLTKLGVKKLNVPSTLNA--RLLNTRVERLRETLRFLRSI 188
Y +LG K + + ++L +L ET F+ ++
Sbjct: 176 NMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 219
>UNIPROTKB|E2RL82 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
GO:GO:0044212 CTD:51001 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 OMA:TRVAYLQ GeneTree:ENSGT00390000005801
EMBL:AAEX03015990 RefSeq:XP_003433727.1 Ensembl:ENSCAFT00000015040
GeneID:100684270 KEGG:cfa:100684270 Uniprot:E2RL82
Length = 417
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 39/197 (19%), Positives = 87/197 (44%)
Query: 32 LYLKFKTSHRENLRYLRAIGVIDPSTKPHKLPSPEVVSQILSTID----FFKSKGLTNGH 87
L L F+ ++ L +L+ +G+ D P+ + + S+ L + + +SK +
Sbjct: 180 LRLDFEKDIKQILMFLKDLGIEDNQLGPYLTKNYAIFSEDLENLKTRVAYLQSKNFSKAQ 239
Query: 88 FSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLKP 147
+++ P F ++F ++ F +L SV++ R L++ P++L+ ++E +
Sbjct: 240 IAQMVRNAP--FLLSFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLEPVKEN 297
Query: 148 TLDYLTKLGVKKLNVPSTLNA--RLLNTRVERLRETLRFLRSIGLNRREAAEFCARMPAI 205
Y +LG K + + ++L +L ET ++ ++ +N R P +
Sbjct: 298 MKVYRLELGFKHNEIQHMITRVPKMLTANKRKLTETFDYVHNV-MNIPH--HLIVRFPQV 354
Query: 206 FGYNI----EHHLKIKF 218
F + E HL + +
Sbjct: 355 FNTRLFKVKERHLFLTY 371
>UNIPROTKB|Q96E29 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AF132946 EMBL:AP003465 EMBL:BC012995 IPI:IPI00101163
IPI:IPI00798150 RefSeq:NP_057026.3 UniGene:Hs.308613 PDB:3M66
PDB:3OPG PDBsum:3M66 PDBsum:3OPG ProteinModelPortal:Q96E29
SMR:Q96E29 STRING:Q96E29 DMDM:74731522 PaxDb:Q96E29 PRIDE:Q96E29
DNASU:51001 Ensembl:ENST00000287025 GeneID:51001 KEGG:hsa:51001
UCSC:uc003yhr.1 GeneCards:GC08M097321 HGNC:HGNC:24258 HPA:HPA002966
neXtProt:NX_Q96E29 PharmGKB:PA142671309 InParanoid:Q96E29
OMA:TRVAYLQ PhylomeDB:Q96E29 EvolutionaryTrace:Q96E29
GenomeRNAi:51001 NextBio:53456 ArrayExpress:Q96E29 Bgee:Q96E29
CleanEx:HS_MTERFD1 Genevestigator:Q96E29 GermOnline:ENSG00000156469
Uniprot:Q96E29
Length = 417
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 36/164 (21%), Positives = 76/164 (46%)
Query: 32 LYLKFKTSHRENLRYLRAIGVIDPS-----TKPHKLPSPEVVSQILSTIDFFKSKGLTNG 86
L L F+ ++ L +L+ +G+ D TK H + S E + + + + + SK +
Sbjct: 180 LRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFS-EDLENLKTRVAYLHSKNFSKA 238
Query: 87 HFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLK 146
+++ P F +NF ++ F +L SV++ R L++ P++L+ ++E +
Sbjct: 239 DVAQMVRKAP--FLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLEPVKE 296
Query: 147 PTLDYLTKLGVKKLNVPSTLNA--RLLNTRVERLRETLRFLRSI 188
Y +LG K + + ++L +L ET F+ ++
Sbjct: 297 NMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 340
>UNIPROTKB|F1RY61 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] GO:GO:0005739 GO:GO:0044212 CTD:51001 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
GeneTree:ENSGT00390000005801 EMBL:CU463146 RefSeq:XP_001929306.1
UniGene:Ssc.10844 Ensembl:ENSSSCT00000006681 GeneID:100152384
KEGG:ssc:100152384 Uniprot:F1RY61
Length = 414
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 49/224 (21%), Positives = 98/224 (43%)
Query: 32 LYLKFKTSHRENLRYLRAIGVIDPS-----TKPHKLPSPEVVSQILSTIDFFKSKGLTNG 86
L L F+ ++ L +L+ +G+ D TK + + S E + + + + + +SK +
Sbjct: 177 LRLDFEKDIKQILLFLKDLGMEDNQLGTFLTKNYAIFS-EDLENLKTRVAYLQSKNFSKA 235
Query: 87 HFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIGCPQMLSSNVEYCLK 146
+++ P F ++F ++ F +L SV++ R LII P++L+ ++E +
Sbjct: 236 DIAQMVRNAP--FLLSFSVERLDNRLGFFQKELELSVKKTRDLIIRLPRLLTGSLEPVKE 293
Query: 147 PTLDYLTKLGVKKLNVPSTLNA--RLLNTRVERLRETLRFLRSIGLNRREAAEFCARMPA 204
Y +LG K + + ++L +L ET ++ ++ R R P
Sbjct: 294 NMKVYRLELGFKHNEIQHMVTKIPKMLTANKRKLTETFDYVHNV---MRIPHHVIVRFPQ 350
Query: 205 IFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIA 248
+F + +K + FLA + K P Y SL K ++
Sbjct: 351 VFNTRL-FKIKERHLFLAYLGRAQYDPAK--PNYI--SLDKLVS 389
>TAIR|locus:2036843 [details] [associations]
symbol:AT1G61960 "AT1G61960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC004392
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT028981
IPI:IPI00521152 PIR:T02140 RefSeq:NP_176387.1 UniGene:At.36342
ProteinModelPortal:O80701 PaxDb:O80701 PRIDE:O80701
EnsemblPlants:AT1G61960.1 GeneID:842491 KEGG:ath:AT1G61960
TAIR:At1g61960 eggNOG:NOG329656 InParanoid:O80701 OMA:ITHTFET
PhylomeDB:O80701 Genevestigator:O80701 Uniprot:O80701
Length = 457
Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
Identities = 36/119 (30%), Positives = 54/119 (45%)
Query: 134 PQMLSSNVEYCLKPTLDYLTKLGVKKLNVPSTL--NARLLNTRVERLRETLRFLRSIGLN 191
P LS + E + T + L G+ K V L + + + + +++ ++ +G +
Sbjct: 283 PSFLSYS-EKKITHTFETLKSCGLLKHEVLLLLKKHPKCICSSEQKIVNSIETFLGLGFS 341
Query: 192 RREAAEFCARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPR 250
R E A R P Y E +K K EF+ M LE L PQ FG+SL KR PR
Sbjct: 342 RDEFAMMVKRYPQCIDYTAET-VKKKTEFIVKNMNWPLEALVSIPQVFGYSLEKRTVPR 399
>TAIR|locus:2102827 [details] [associations]
symbol:AT3G46950 "AT3G46950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL096859
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
UniGene:At.28750 UniGene:At.48743 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:AY045902 EMBL:AY117265 IPI:IPI00540395
PIR:T12953 RefSeq:NP_190279.1 ProteinModelPortal:Q9STG7
PaxDb:Q9STG7 PRIDE:Q9STG7 EnsemblPlants:AT3G46950.1 GeneID:823848
KEGG:ath:AT3G46950 TAIR:At3g46950 eggNOG:NOG316991
InParanoid:Q9STG7 OMA:ENPPISS PhylomeDB:Q9STG7 ArrayExpress:Q9STG7
Genevestigator:Q9STG7 Uniprot:Q9STG7
Length = 450
Score = 105 (42.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 152 LTKLGVKKLNVPSTLNAR--LLNTRVERLRETLRFLRSIGLNRREAAEFCARMPAIFGYN 209
L K G+ + + S L +R + + +++ +++ +G +R + R P Y+
Sbjct: 295 LKKCGLVEEEIISVLKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYS 354
Query: 210 IEHHLKIKFEFLAVEMERSLEELKEFPQYFGFSLGKRIAPRHWHLKQRNVRIKLNKMLLW 269
E L+ KFE L M LE + P G+SL KRI PR ++ ++K L+
Sbjct: 355 GET-LRKKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIVPR-----SNVIKALMSKGLIG 408
Query: 270 SDN 272
S+N
Sbjct: 409 SEN 411
Score = 47 (21.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 17/80 (21%), Positives = 32/80 (40%)
Query: 73 STIDFFKSKGLTNGHFSRLAYLCPQFFSINFDPSEIEPVFDFLITDLHASVEERRGLIIG 132
S ++ +S G + SR+ P+ + + S + P FL AS E ++
Sbjct: 86 SVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKS-LRPKLQFL-KSRGASSSEVIEIVSN 143
Query: 133 CPQMLSSNVEYCLKPTLDYL 152
P +L E + D++
Sbjct: 144 VPTILDKKGEESVSLYYDFV 163
>TAIR|locus:2018057 [details] [associations]
symbol:AT1G62120 "AT1G62120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR eggNOG:KOG1267
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000113939 ProtClustDB:CLSN2682053 EMBL:BT015077
EMBL:BT015902 IPI:IPI00545469 RefSeq:NP_176403.1 UniGene:At.49506
ProteinModelPortal:Q6DBE5 PRIDE:Q6DBE5 EnsemblPlants:AT1G62120.1
GeneID:842508 KEGG:ath:AT1G62120 TAIR:At1g62120 InParanoid:Q6DBE5
OMA:MYVRKHD PhylomeDB:Q6DBE5 Genevestigator:Q6DBE5 Uniprot:Q6DBE5
Length = 437
Score = 112 (44.5 bits), Expect = 0.00088, P = 0.00088
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 174 RVERLRETLRFLRSIGLNRREAAEFCARMPAIFGYNIEHHLKIKFEFLAVEMERSLEELK 233
++E ET FL +G +R E R P GY+ E +K K EFL EM L+ +
Sbjct: 297 KIENSVET--FL-GLGFSRDEFLMMVKRFPQCIGYSTEL-MKTKTEFLVTEMNWPLKAVA 352
Query: 234 EFPQYFGFSLGKRIAPR 250
PQ G+SL KR PR
Sbjct: 353 SIPQVLGYSLEKRTVPR 369
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.140 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 279 255 0.00085 114 3 11 22 0.38 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 608 (65 KB)
Total size of DFA: 194 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.40u 0.07s 22.47t Elapsed: 00:00:03
Total cpu time: 22.41u 0.07s 22.48t Elapsed: 00:00:03
Start: Mon May 20 23:16:00 2013 End: Mon May 20 23:16:03 2013