BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023627
(279 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547337|ref|XP_002514726.1| exonuclease, putative [Ricinus communis]
gi|223546330|gb|EEF47832.1| exonuclease, putative [Ricinus communis]
Length = 448
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 174/295 (58%), Gaps = 69/295 (23%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRW---------- 101
+ASLATYFGLG+QTHRSLDDVRMN++VLK CATVL L + LP F V
Sbjct: 152 MASLATYFGLGKQTHRSLDDVRMNVDVLKCCATVLLLVTILPYAFVVTNVGSTTFQPAPF 211
Query: 102 ---------------------------EMCSAASVSEGSSGYARFMEPDE---------- 124
E+ S+ +V EG SG+ F+EPDE
Sbjct: 212 SRGTLGNEMNIDSLQQDAAIEPKKESSEIPSSLTVPEGGSGHGGFLEPDEVSVSFIRASF 271
Query: 125 --------------------LYCSRLKIRY-GISTRFVDQAGRPRLSFVVDASQSLCTVL 163
L+CS L++RY G+ST+F D AGRPRLSFVVDA +L ++L
Sbjct: 272 CPHSWGVQRMVLLYKDVPLQLHCSHLRVRYNGLSTKFADYAGRPRLSFVVDAPPNLYSIL 331
Query: 164 DACEVVAKKLFEDSRSNSEWNPVVTRQS-GNDPAARLRIPTVVFGDVAQYATEMYRKEPS 222
DAC+ +A+K+ +S S+S+W VVT+ N P RL IPT V GDVAQYATE++ K+ S
Sbjct: 332 DACDKIAQKVSAESGSSSKWKHVVTKHDFDNSPTVRLHIPTEVTGDVAQYATEIFHKDSS 391
Query: 223 GDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIH 277
++K EF R AAEL++ + GTFV A+ SLDPYDY+ E+ AGIRLVAKKLI+H
Sbjct: 392 ETMKKHEFSRLGAAELNTWFRQGTFVAAYFSLDPYDYLQEKKAGIRLVAKKLIMH 446
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 7 RFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLLASLA 56
R EIAFFD+ET P + AILEFGAILVCP+TL EL Y+T + A
Sbjct: 11 RSEIAFFDLETTLPGE-CEGFAILEFGAILVCPRTLVELHTYATFVQPAA 59
>gi|224124082|ref|XP_002330100.1| predicted protein [Populus trichocarpa]
gi|222871234|gb|EEF08365.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/158 (65%), Positives = 125/158 (79%), Gaps = 4/158 (2%)
Query: 124 ELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEW 183
+L C RL+IR+G+ST+F D AGRPRLSFVVDAS SLC VLD CE + +K+ DS +S+W
Sbjct: 315 QLRCPRLRIRFGLSTKFSDHAGRPRLSFVVDASPSLCDVLDTCESIVRKVCADSDCSSDW 374
Query: 184 NPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSL 241
VVTR+ G N+P RL IPT V GDVAQYAT+MY KEPSG QKL F +FDAAELD+
Sbjct: 375 RSVVTRKQGFVNNPTVRLNIPTAVNGDVAQYATDMYLKEPSGTTQKLIFSKFDAAELDTW 434
Query: 242 LKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
+PGTFVDA+LSLDPYD Y+Q++GIRLVA KLIIH+E
Sbjct: 435 FRPGTFVDAYLSLDPYD--YQQTSGIRLVANKLIIHNE 470
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 7 RFEIAFFDVETAFPNPPG--QRIAIL--EFGAILVCPKTLEELQPYSTLLASLATYFGLG 62
R AF ++ A P P G +A+L +FG + + +ASLATYFGLG
Sbjct: 106 RIREAFAEIGRAAPEPKGTIDSLALLTQKFGR-----------RAGNMKMASLATYFGLG 154
Query: 63 QQTHRSLDDVRMNLEVLKYCATVLFLE 89
QTHRSLDDVRMN+EVLK+CATVLFL
Sbjct: 155 NQTHRSLDDVRMNVEVLKHCATVLFLN 181
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 5 QDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
+++ EIAFFDVET P PGQ AILEFGAILVCP+ LEE++ YSTL+
Sbjct: 2 ENKTEIAFFDVETTVPTRPGQGYAILEFGAILVCPQKLEEIRSYSTLV 49
>gi|297733948|emb|CBI15195.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 139/194 (71%), Gaps = 10/194 (5%)
Query: 93 PDIFTVNR-----WEMCSAASVSEGSSGYARFMEPDELYCSRLKIRYGISTRFVDQAGRP 147
PD F + + EM S + S+ YA F++P E+ + + +R+GISTRFVD AGRP
Sbjct: 257 PDPFNLEKPVTESLEMLSTTTASQDCCDYAGFLDPAEVSVASI-MRFGISTRFVDPAGRP 315
Query: 148 RLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWNPVVTRQSG--NDPAARLRIPTVV 205
RLSFVVD S SLC VLDAC+ +A KL DS S+SEW PVV R++G N P RL IPTV
Sbjct: 316 RLSFVVDGSPSLCQVLDACDQLAYKLSVDSGSSSEWRPVVIRKTGFLNTPTIRLSIPTVT 375
Query: 206 FGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSA 265
GD+A YATE+Y+K+PSG Q+L F RFDAAELD+L PGT VD + +LDPYD Y+Q+A
Sbjct: 376 NGDIAIYATEIYQKDPSGTTQRLIFSRFDAAELDTLFVPGTLVDTYFALDPYD--YQQNA 433
Query: 266 GIRLVAKKLIIHSE 279
GI+LVAKKLIIH +
Sbjct: 434 GIKLVAKKLIIHGK 447
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLES LPDIFT N W +A + S
Sbjct: 147 MATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTTNSWVSPNAVTRSR 206
Query: 112 GSSGYA 117
S+G A
Sbjct: 207 -SNGKA 211
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
M P ++R EIAFFDVET P GQ AILEFGAILVCP+ L EL+ YSTL+
Sbjct: 1 MGPGEERSEIAFFDVETTVPTRVGQGFAILEFGAILVCPRKLVELESYSTLV 52
>gi|225457353|ref|XP_002281793.1| PREDICTED: uncharacterized protein LOC100265514 [Vitis vinifera]
Length = 497
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 138/210 (65%), Gaps = 34/210 (16%)
Query: 102 EMCSAASVSEGSSGYARFMEPDE------------------------------LYCSRLK 131
EM S + S+ YA F++P E L+C++L+
Sbjct: 290 EMLSTTTASQDCCDYAGFLDPAEVSVASISASFVPLYRGTRRMQILHNDVKLLLHCTQLR 349
Query: 132 IRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWNPVVTRQS 191
+R+GISTRFVD AGRPRLSFVVD S SLC VLDAC+ +A KL DS S+SEW PVV R++
Sbjct: 350 VRFGISTRFVDPAGRPRLSFVVDGSPSLCQVLDACDQLAYKLSVDSGSSSEWRPVVIRKT 409
Query: 192 G--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVD 249
G N P RL IPTV GD+A YATE+Y+K+PSG Q+L F RFDAAELD+L PGT VD
Sbjct: 410 GFLNTPTIRLSIPTVTNGDIAIYATEIYQKDPSGTTQRLIFSRFDAAELDTLFVPGTLVD 469
Query: 250 AFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
+ +LDPYD Y+Q+AGI+LVAKKLIIH +
Sbjct: 470 TYFALDPYD--YQQNAGIKLVAKKLIIHGK 497
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLES LPDIFT N W +A + S
Sbjct: 147 MATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTTNSWVSPNAVTRSR 206
Query: 112 GSSGYA 117
S+G A
Sbjct: 207 -SNGKA 211
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
M P ++R EIAFFDVET P GQ AILEFGAILVCP+ L EL+ YSTL+
Sbjct: 1 MGPGEERSEIAFFDVETTVPTRVGQGFAILEFGAILVCPRKLVELESYSTLV 52
>gi|449477209|ref|XP_004154961.1| PREDICTED: uncharacterized LOC101223607 [Cucumis sativus]
Length = 359
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 124/157 (78%), Gaps = 4/157 (2%)
Query: 124 ELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEW 183
+L C+ L++R+GIST+F D AGRPRLSFVVD +LCTVL+A + VA++LF DS S SEW
Sbjct: 205 QLLCNNLRVRFGISTKFTDYAGRPRLSFVVDVPPNLCTVLEASDGVAQRLFSDSGSGSEW 264
Query: 184 NPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSL 241
P VTR++G N P RL IPT V GDVA YATEM++KE SG +Q+L F +FDAAELDSL
Sbjct: 265 RPAVTRKNGYFNYPTMRLHIPTAVSGDVANYATEMHQKEASGAVQRLIFSKFDAAELDSL 324
Query: 242 LKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHS 278
+KPG +DAF+SLD YD Y+QSAGIRLVAKKLII S
Sbjct: 325 IKPGAILDAFISLDTYD--YQQSAGIRLVAKKLIIRS 359
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 46/50 (92%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRW 101
+A+LA+YFG+GQQTHRSLDDVRMNLEVLKYCATVLFLES LP++F N W
Sbjct: 1 MATLASYFGIGQQTHRSLDDVRMNLEVLKYCATVLFLESSLPEVFPENSW 50
>gi|449440810|ref|XP_004138177.1| PREDICTED: uncharacterized protein LOC101203629 [Cucumis sativus]
Length = 471
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 124/157 (78%), Gaps = 4/157 (2%)
Query: 124 ELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEW 183
+L C+ L++R+GIST+F D AGRPRLSFVVD +LCTVL+A + VA++LF DS S SEW
Sbjct: 317 QLLCNNLRVRFGISTKFTDYAGRPRLSFVVDVPPNLCTVLEASDGVAQRLFSDSGSGSEW 376
Query: 184 NPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSL 241
P VTR++G N P RL IPT V GDVA YATEM++KE SG +Q+L F +FDAAELDSL
Sbjct: 377 RPAVTRKNGYFNYPTMRLHIPTAVSGDVANYATEMHQKEASGAVQRLIFSKFDAAELDSL 436
Query: 242 LKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHS 278
+KPG +DAF+SLD YD Y+QSAGIRLVAKKLII S
Sbjct: 437 IKPGAILDAFISLDTYD--YQQSAGIRLVAKKLIIRS 471
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 46/50 (92%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRW 101
+A+LA+YFG+GQQTHRSLDDVRMNLEVLKYCATVLFLES LP++F N W
Sbjct: 147 MATLASYFGIGQQTHRSLDDVRMNLEVLKYCATVLFLESSLPEVFPENSW 196
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
M P +DR EIAFFDVET P GQ+ +ILEFGAILVCPK L EL+ YSTL+
Sbjct: 1 MGPTEDRSEIAFFDVETTVPTRQGQKFSILEFGAILVCPKKLVELESYSTLV 52
>gi|356562862|ref|XP_003549687.1| PREDICTED: uncharacterized protein LOC100818863 [Glycine max]
Length = 501
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 124/157 (78%), Gaps = 4/157 (2%)
Query: 125 LYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWN 184
L+C+ LK+R+GI++RF D+AGRPRLSFVVD S SLC VLDAC+ VA+KL DS S+S+W
Sbjct: 347 LHCTDLKVRFGINSRFFDRAGRPRLSFVVDPSPSLCNVLDACDRVAQKLNMDSGSSSDWR 406
Query: 185 PVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLL 242
PVV R+ G N P RL IPT V DV YATE+Y++E SG +Q+L F +FDAAEL SL
Sbjct: 407 PVVIRKEGFFNYPTIRLHIPTAVVADVDIYATEIYQRESSGTVQRLLFSKFDAAELGSLF 466
Query: 243 KPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
PGTFVDAFLSLDPYD Y+Q+AGI+LV+KKLIIH +
Sbjct: 467 MPGTFVDAFLSLDPYD--YQQNAGIKLVSKKLIIHGK 501
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 67/104 (64%), Gaps = 3/104 (2%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LATYFGLG+QTHRSLDDVRMNLEVLKYCATVLFLES LPDIFT N W S S++
Sbjct: 145 MATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSW--VSPNSITR 202
Query: 112 GSSGYARFMEPDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDA 155
S + L ++ + +T D+ P +SF + +
Sbjct: 203 SRSNEKSLSQGGLLNINKDSVLSSPATESKDK-NHPIISFALSS 245
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 5 QDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
+DR EI FFDVET+ P GQ A+LEFGAILVCPKTL EL+ YSTL+
Sbjct: 3 EDRSEIVFFDVETSVPTRTGQGFALLEFGAILVCPKTLTELRNYSTLV 50
>gi|356512002|ref|XP_003524710.1| PREDICTED: uncharacterized protein LOC100788659 [Glycine max]
Length = 501
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 124/158 (78%), Gaps = 4/158 (2%)
Query: 124 ELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEW 183
+L+C+ LK+R+GI+++F D AGRPRLSFVVD S SLC VLDAC+ VA+KL DS S+S+W
Sbjct: 346 QLHCTDLKVRFGINSKFFDSAGRPRLSFVVDPSPSLCNVLDACDRVAQKLTVDSGSSSDW 405
Query: 184 NPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSL 241
PVV R+ G N P RL IPT V D+A YATE+Y++E SG +Q+L F +FDAAEL SL
Sbjct: 406 RPVVIRKEGFFNYPTVRLHIPTAVVADIAIYATEIYQRESSGTVQRLLFSKFDAAELGSL 465
Query: 242 LKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
PGTFVDA SLDPYD Y+Q+AGI+LVAKKLIIHS+
Sbjct: 466 FMPGTFVDAVFSLDPYD--YQQNAGIKLVAKKLIIHSK 501
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LATYFGLG+QTHRSLDDVRMNLEVLKYCATVLFLES LPDIFT N W +A + S
Sbjct: 145 MATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPNATTRSR 204
Query: 112 GS 113
+
Sbjct: 205 SN 206
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 5 QDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
++R EI FFDVET+ P GQ A+LEFGAILVCP+TL EL+ YSTL+
Sbjct: 3 EERSEIVFFDVETSVPTRAGQGFALLEFGAILVCPRTLTELRDYSTLV 50
>gi|147817752|emb|CAN66660.1| hypothetical protein VITISV_031720 [Vitis vinifera]
Length = 535
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 139/248 (56%), Gaps = 72/248 (29%)
Query: 102 EMCSAASVSEGSSGYARFMEPDE------------------------------LYCSRLK 131
EM S + S+ YA F++P E L+C++L+
Sbjct: 290 EMLSTTTASQDCCDYAGFLDPAEVSVASISASFVPLYRGTRRMQILHNDVKLLLHCTQLR 349
Query: 132 IRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWNPVVTRQS 191
+R+GISTRFVD AGRPRLSFVVD S SLC VLDAC+ +A KL DS S+SEW PVV R++
Sbjct: 350 VRFGISTRFVDPAGRPRLSFVVDGSPSLCQVLDACDQLAYKLSVDSGSSSEWRPVVIRKT 409
Query: 192 G--NDPAARLR--------------------------------------IPTVVFGDVAQ 211
G N P RLR IPTV GD+A
Sbjct: 410 GFLNTPTIRLRQVLILFAFYENKQYAVGVWLLLSLLVLMCKNCKMQRKIIPTVTNGDIAI 469
Query: 212 YATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVA 271
YATE+Y+K+PSG Q+L F RFDAAELD+L PGT VD + +LDPYD Y+Q+AGI+LVA
Sbjct: 470 YATEIYQKDPSGTTQRLIFSRFDAAELDTLFVPGTLVDTYFALDPYD--YQQNAGIKLVA 527
Query: 272 KKLIIHSE 279
KKLIIH +
Sbjct: 528 KKLIIHGK 535
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLES LPDIFT N W +A + S
Sbjct: 147 MATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTTNSWVSPNAVTRSR 206
Query: 112 GSSGYA 117
S+G A
Sbjct: 207 -SNGKA 211
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
M P ++R EIAFFDVET P GQ AILEFGAILVCP+ L EL+ YSTL+
Sbjct: 1 MGPGEERSEIAFFDVETTVPTRVGQGFAILEFGAILVCPRKLVELESYSTLV 52
>gi|255547339|ref|XP_002514727.1| exonuclease, putative [Ricinus communis]
gi|223546331|gb|EEF47833.1| exonuclease, putative [Ricinus communis]
Length = 501
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 135/210 (64%), Gaps = 34/210 (16%)
Query: 102 EMCSAASVSEGSSGYARFMEPD------------------------------ELYCSRLK 131
EM S +V +G S YA F+E + +L C RL+
Sbjct: 294 EMPSLVTVRDGGSAYAGFLETEKVSISSIRASFVPLFRGAQRMVLLHEDVILQLCCPRLR 353
Query: 132 IRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWNPVVTRQS 191
+R+G+ST+FVD AGRPRLSFVVDA +LC++LD C+ A+KL +S S S+W VV+R+
Sbjct: 354 VRFGLSTKFVDSAGRPRLSFVVDAPPNLCSILDTCDGSAQKLSVESGSTSDWRQVVSRKP 413
Query: 192 G--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVD 249
G N P RL IPT V GDVAQYATE+Y+++ SG ++KL F +F+AAEL++ GTF+D
Sbjct: 414 GFVNYPIVRLHIPTAVNGDVAQYATEIYQRDSSGAMEKLVFSKFEAAELETWFISGTFLD 473
Query: 250 AFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
A+ SL PYD Y+QSAGIRLVAKKLII E
Sbjct: 474 AYFSLHPYD--YQQSAGIRLVAKKLIIDKE 501
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 48/59 (81%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVS 110
+ASLATYFGLG+QTHRSLDDVRMNLEVLKYCATVLFLES LPD F W +A + S
Sbjct: 149 MASLATYFGLGKQTHRSLDDVRMNLEVLKYCATVLFLESSLPDAFPEKSWVSPNATTRS 207
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 38/50 (76%)
Query: 3 PRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
P +R EIAFFD+ET PN PGQ AILEFGAILVC + LEEL YSTL+
Sbjct: 5 PTDERSEIAFFDLETTVPNRPGQGFAILEFGAILVCSRKLEELHSYSTLV 54
>gi|297806807|ref|XP_002871287.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317124|gb|EFH47546.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
Length = 468
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 115/159 (72%), Gaps = 4/159 (2%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P +LYCS LK+R+G+S +F+D GR +L+FVVD + SLC++L+AC+ A+KL DS S S
Sbjct: 312 PLQLYCSCLKVRFGVSGKFLDNTGRRKLNFVVDLNLSLCSILEACDSSAQKLSVDSGSTS 371
Query: 182 EWNPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELD 239
WNPVV G N P AR+ I T + GD A+YATE++++E SG QKL F EL+
Sbjct: 372 GWNPVVNPMKGFVNYPNARIHIATEINGDAARYATEIHQRESSGASQKLIFSNPSGEELE 431
Query: 240 SLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHS 278
SLL G+ VDAFLSL+PYD Y+Q AGIRLVAKKL+IHS
Sbjct: 432 SLLTMGSVVDAFLSLEPYD--YQQKAGIRLVAKKLVIHS 468
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 39/42 (92%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLP 93
+A+LA YFGLG QTHRSLDDVRMNLEVLKYCATVLFLES LP
Sbjct: 145 MATLARYFGLGNQTHRSLDDVRMNLEVLKYCATVLFLESSLP 186
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
MDP +DR EIAFFDVET PN GQR AILEFG+ILVCPK L EL+ Y+TL+
Sbjct: 1 MDP-EDRSEIAFFDVETTVPNR-GQRFAILEFGSILVCPKKLTELRSYTTLV 50
>gi|218184498|gb|EEC66925.1| hypothetical protein OsI_33530 [Oryza sativa Indica Group]
Length = 422
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 146/256 (57%), Gaps = 34/256 (13%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFT-------------- 97
+A+LA YF LG Q HRSL DVRMNL+VLK C+TVLFLE P++ +
Sbjct: 160 MANLADYFNLGPQIHRSLYDVRMNLDVLKCCSTVLFLEDNFPELLSGGFLNPNDISLEFI 219
Query: 98 ---------VNRWEMCSAASVS------EGSSGYARFMEPDELYCSRLKIRYGISTRFVD 142
+ + + S + E S P +L C L++RY + + D
Sbjct: 220 QVSISFSSCLGKRSLTSGLRTNSLPYQFEWSLCIEHNDNPLQLRCIGLRVRYEVCL-YQD 278
Query: 143 QAGRP-RLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWNPVVTRQSGNDPAARLRI 201
GRP +LS VVD ++L VL+ C+ +A+ F SNSEW V+ ++ GN P+ RL I
Sbjct: 279 SEGRPNKLSIVVDIPENLRQVLEFCDEIAEITFRKFGSNSEWRQVI-KEYGNRPSVRLNI 337
Query: 202 PTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVY 261
P V GD A YATE+Y KE SG+I+K +F + D AEL+ + G VDAF S++ YD Y
Sbjct: 338 PIVGSGDDATYATEIYLKEASGNIRKKDFSKADVAELEFMFFRGDMVDAFFSVELYD--Y 395
Query: 262 EQSAGIRLVAKKLIIH 277
+ +AGIRLVAKKL++H
Sbjct: 396 KNNAGIRLVAKKLVVH 411
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEEL-QPYSTLL 52
EIAFFDVET+ P P +R +LEFG+I +CP+ L E+ +P+ TL+
Sbjct: 22 EIAFFDVETSMPWGPRERRTLLEFGSIFLCPRQLVEVAEPFITLV 66
>gi|15240840|ref|NP_196388.1| exonuclease family protein [Arabidopsis thaliana]
gi|9759593|dbj|BAB11450.1| exonuclease-like protein [Arabidopsis thaliana]
gi|332003813|gb|AED91196.1| exonuclease family protein [Arabidopsis thaliana]
Length = 468
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 115/159 (72%), Gaps = 4/159 (2%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P +LYCS LKIR+G++ +F+D GR RL+FVVD + SL ++L+AC+ A+KL DS S S
Sbjct: 312 PLQLYCSYLKIRFGVNGKFLDNTGRRRLNFVVDLNPSLYSILEACDSNAQKLSVDSGSTS 371
Query: 182 EWNPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELD 239
EWNPVV G N P AR+ I T + GD A+YATE++++E SG QKL F + EL+
Sbjct: 372 EWNPVVNPMKGFVNYPNARIHIATEINGDEARYATEIHQRESSGATQKLIFSNPNNEELE 431
Query: 240 SLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHS 278
SLL G+ VDAFLSL+PYD Y+Q AGIRLVAKKL+I S
Sbjct: 432 SLLTTGSVVDAFLSLEPYD--YQQKAGIRLVAKKLVIQS 468
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 39/42 (92%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLP 93
+A+LA YFGLG QTHRSLDDVRMNLEVLKYCATVLFLES LP
Sbjct: 145 MATLARYFGLGNQTHRSLDDVRMNLEVLKYCATVLFLESSLP 186
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
MDP +DR EIAFFDVET P GQR AILEFG+ILVCPK L EL+ Y+TL+
Sbjct: 1 MDP-EDRSEIAFFDVETTVPKR-GQRFAILEFGSILVCPKKLTELRSYTTLV 50
>gi|357146112|ref|XP_003573879.1| PREDICTED: uncharacterized protein LOC100834632 [Brachypodium
distachyon]
Length = 492
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P L C+ LK+++G+ST+F+D AGRP+L+ VVD ++LC VL+ C+ +A++ ++S S S
Sbjct: 336 PLHLCCAALKVQFGVSTKFLDNAGRPKLNIVVDIPENLCKVLEFCDGLAQRSSQESGSTS 395
Query: 182 EWNPVVTRQS-GNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDS 240
+W P++ + N P RL IPT+V GD + Y+T++Y+KEPSG+IQKL F + D AELDS
Sbjct: 396 DWRPLIKKYGYVNHPTVRLNIPTIVSGDASVYSTDIYQKEPSGNIQKLAFSKVDTAELDS 455
Query: 241 LLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
L G +DAF S + YD Y+Q+AGIRLVAKKL++HS+
Sbjct: 456 LFAQGNKLDAFFSPEIYD--YQQNAGIRLVAKKLVVHSK 492
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTV-NRWEMCSAASVS 110
+ASLA YFGLG+Q HRSLDDVRMNL+VLKYCATVLFLE+ LP++ TV N E S +
Sbjct: 166 MASLANYFGLGRQKHRSLDDVRMNLDVLKYCATVLFLEASLPEVLTVENLLERAITRSKA 225
Query: 111 EGSS 114
G++
Sbjct: 226 NGAT 229
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EIAFFDVET+ P GQ A+LEFGAILVCP+ L E+ Y+TL+
Sbjct: 28 EIAFFDVETSVPQRTGQGYALLEFGAILVCPRRLVEVACYATLV 71
>gi|31432192|gb|AAP53854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 514
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 146/256 (57%), Gaps = 34/256 (13%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFT-------------- 97
+A+LA YF LG Q HRSL DVRMNL+VLK C+TVLFLE P++ +
Sbjct: 261 MANLADYFNLGPQIHRSLYDVRMNLDVLKCCSTVLFLEDNFPELLSGGFLNPNDISLEFI 320
Query: 98 ---------VNRWEMCSAASVS------EGSSGYARFMEPDELYCSRLKIRYGISTRFVD 142
+ + + S + E S P +L C L++RY + + D
Sbjct: 321 QVSISFSSCLGKRSLTSGLRTNSLPYQFEWSLCIEHNDNPLQLRCIGLRVRYEVYL-YQD 379
Query: 143 QAGRP-RLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWNPVVTRQSGNDPAARLRI 201
GRP +LS VVD ++L VL+ C+ +A+ F SNSEW V+ ++ GN P+ RL I
Sbjct: 380 SEGRPNKLSIVVDIPENLRQVLEFCDEIAEITFRKFGSNSEWRQVI-KEYGNRPSVRLNI 438
Query: 202 PTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVY 261
P V GD A YATE+Y KE SG+I+K +F + D AEL+ + G VDAF S++ YD Y
Sbjct: 439 PIVGSGDDATYATEIYLKEASGNIRKKDFSKADVAELEFMFFRGDMVDAFFSVELYD--Y 496
Query: 262 EQSAGIRLVAKKLIIH 277
+ +AGIRLVAKKL++H
Sbjct: 497 KNNAGIRLVAKKLVVH 512
>gi|15451562|gb|AAK98686.1|AC021893_20 Putative exonuclease [Oryza sativa Japonica Group]
gi|31432000|gb|AAP53699.1| exonuclease family protein, expressed [Oryza sativa Japonica Group]
gi|222612804|gb|EEE50936.1| hypothetical protein OsJ_31475 [Oryza sativa Japonica Group]
Length = 436
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 146/266 (54%), Gaps = 44/266 (16%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRW---EMCSAA- 107
+A+LA YF LG Q HRSL DVRMNL+VLK C+TVLFLE P + + E+ S
Sbjct: 159 MANLADYFNLGPQIHRSLYDVRMNLDVLKCCSTVLFLEDNFPKLLSGGLRHFPELLSGGF 218
Query: 108 -------------SVSEGSSGYARFM-----------------------EPDELYCSRLK 131
S+S S R + +P +L+C L+
Sbjct: 219 LNPNDISLEFIQVSISFSSCLGKRSLNSGLRTNPLPYEFERSLCIKHNDDPLQLHCIGLR 278
Query: 132 IRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWNPVVTRQS 191
+ Y +S + GRP+LS VVD ++L VL+ C+ +AK F + S SEW V+ ++
Sbjct: 279 VHYEVSLN-QNSEGRPKLSIVVDIPENLRQVLEFCDEIAKTTFREFGSTSEWRQVI-KEY 336
Query: 192 GNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAF 251
GN P RL IP + GD A YA E+Y KE SG+I+K +F + D AEL+ + G VDAF
Sbjct: 337 GNRPCVRLNIPIIGSGDDATYAIEIYLKEASGNIRKKDFSKADVAELEFMFFRGDMVDAF 396
Query: 252 LSLDPYDYVYEQSAGIRLVAKKLIIH 277
S++ Y+ Y+ +AGIRLVAKKL++H
Sbjct: 397 FSVELYN--YKNNAGIRLVAKKLVVH 420
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EIAFFDVET+ P P +R +LEFG+I +CP+ +E +P+ TL+
Sbjct: 22 EIAFFDVETSMPWGPRERRTLLEFGSIFLCPRLVEVAEPFVTLV 65
>gi|125531875|gb|EAY78440.1| hypothetical protein OsI_33531 [Oryza sativa Indica Group]
Length = 482
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 33/216 (15%)
Query: 95 IFTVNRWEMCSAASVSEGSSGYARFMEPD------------------------------E 124
I + + S + SSG++ F+EPD +
Sbjct: 269 ISNIEEMTLGSGIQIDASSSGFSGFLEPDDVSTESIQISVPSSYRLTRKTSIKHKGSPIQ 328
Query: 125 LYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWN 184
L C+ L+I++G+ST+F+D AGRP+L+ +VD ++L +L+ C+ +A+K +DS S SEW
Sbjct: 329 LCCAGLRIQFGVSTKFLDSAGRPKLNILVDIPENLSKILEFCDGIAQKSSQDSGSTSEWR 388
Query: 185 PVVTRQS-GNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLK 243
P++ + N P RL IPT+V G+ A Y T++Y+KE SG+IQKL F + D AELDS
Sbjct: 389 PLIKKYGYVNRPTVRLHIPTIVSGEAATYGTDIYQKEASGNIQKLVFSKVDVAELDSWFV 448
Query: 244 PGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
G VDAF SL+ YD YEQ+AGIRLVAKKL++ S+
Sbjct: 449 RGNTVDAFFSLELYD--YEQNAGIRLVAKKLVVQSK 482
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTV 98
+ASLA YFGLG+Q+HRSLDDVRMNLEVLKYCATVLFLE+ LP + TV
Sbjct: 156 MASLANYFGLGRQSHRSLDDVRMNLEVLKYCATVLFLEASLPGVLTV 202
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EIAFFDVET+ P GQ A+LEFGAILVCP+ L + Y+TL+
Sbjct: 28 EIAFFDVETSVPQRAGQGYALLEFGAILVCPRRLVVVGSYATLV 71
>gi|15451563|gb|AAK98687.1|AC021893_21 Putative exonuclease [Oryza sativa Japonica Group]
gi|31432001|gb|AAP53700.1| exonuclease family protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 493
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 33/216 (15%)
Query: 95 IFTVNRWEMCSAASVSEGSSGYARFMEPD------------------------------E 124
I + + S + SSG++ F+EPD +
Sbjct: 280 ISNIEEMTLGSGIQIDASSSGFSGFLEPDDVSTESIQISVPSSYRLTRKTSIKHKGSPIQ 339
Query: 125 LYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWN 184
L C+ L+I++G+ST+F+D AGRP+L+ +VD ++L +L+ C+ +A+K +DS S SEW
Sbjct: 340 LCCAGLRIQFGVSTKFLDSAGRPKLNILVDIPENLSKILEFCDGIAQKSSQDSGSTSEWR 399
Query: 185 PVVTRQS-GNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLK 243
P++ + N P RL IPT+V G+ A Y TE+Y+KE SG+IQKL F + D AELDS
Sbjct: 400 PLIKKYGYVNCPTVRLHIPTIVSGEAATYGTEIYQKEASGNIQKLVFSKVDVAELDSWFV 459
Query: 244 PGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
G VDAF SL+ YD YE++AGIRLVAKKL++ S+
Sbjct: 460 RGNMVDAFFSLELYD--YEENAGIRLVAKKLVVQSK 493
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTV 98
+ASLA YFGLG+Q+HRSLDDVRMNLEVLKYCATVLFLE+ LP + TV
Sbjct: 167 MASLANYFGLGRQSHRSLDDVRMNLEVLKYCATVLFLEASLPGVLTV 213
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EIAFFDVET+ P GQ A+LEFGAILVCP+ L + Y+TL+
Sbjct: 29 EIAFFDVETSVPQRAGQGYALLEFGAILVCPRRLVVVGSYATLV 72
>gi|226498878|ref|NP_001148000.1| UTP-glucose-P-uridyltransferase homolog [Zea mays]
gi|194706488|gb|ACF87328.1| unknown [Zea mays]
gi|195615060|gb|ACG29360.1| exonuclease [Zea mays]
gi|413934232|gb|AFW68783.1| exonuclease [Zea mays]
Length = 499
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 128/213 (60%), Gaps = 33/213 (15%)
Query: 98 VNRWEMCSAASVSEGSSGYARFMEPD------------------------------ELYC 127
+ ++ + V SSGY F+EPD +L C
Sbjct: 289 IEEMKLNTTTHVDASSSGYPGFLEPDDVSIECIKISVAPLHQFGRRSSIQHRDCPLQLCC 348
Query: 128 SRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWNPVV 187
+ LK+++G+ST+F+D AGRP++S VV+ ++LC VL+ C+V+A+KL ++S S+SEW P++
Sbjct: 349 AGLKVQFGVSTKFLDNAGRPKMSIVVEIPENLCKVLEFCDVLARKLSQESGSSSEWRPLI 408
Query: 188 TRQSG-NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGT 246
+ N P RL IP + D ++T++ ++EPSG+IQKL F A ELDSL G+
Sbjct: 409 KKYGYINRPTIRLNIPPISNSDAVAFSTDICQREPSGNIQKLAFGNVGATELDSLFVKGS 468
Query: 247 FVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
VDAF SL+ YD Y+Q+AGIRLVAK+L+IHS
Sbjct: 469 KVDAFFSLELYD--YQQNAGIRLVAKRLVIHSN 499
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTV-NRWEMCSAASVS 110
+ASLA YFGLG+Q HRSLDDVRMNLEVLKYCATVLFLE+ LP++ TV N E S +
Sbjct: 173 MASLANYFGLGKQRHRSLDDVRMNLEVLKYCATVLFLEASLPEVLTVENLVERAMTRSRA 232
Query: 111 EGSS 114
G++
Sbjct: 233 NGTA 236
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 3 PRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
P + EIAFFDVET+ P GQ A+LEFGAILVCP+ L E+ Y+TL+
Sbjct: 28 PAEGPTEIAFFDVETSVPQRAGQGYALLEFGAILVCPRRLVEVASYATLV 77
>gi|297610461|ref|NP_001064570.2| Os10g0407500 [Oryza sativa Japonica Group]
gi|255679392|dbj|BAF26484.2| Os10g0407500 [Oryza sativa Japonica Group]
Length = 517
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 125/212 (58%), Gaps = 33/212 (15%)
Query: 95 IFTVNRWEMCSAASVSEGSSGYARFMEPD------------------------------E 124
I + + S + SSG++ F+EPD +
Sbjct: 284 ISNIEEMTLGSGIQIDASSSGFSGFLEPDDVSTESIQISVPSSYRLTRKTSIKHKGSPIQ 343
Query: 125 LYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWN 184
L C+ L+I++G+ST+F+D AGRP+L+ +VD ++L +L+ C+ +A+K +DS S SEW
Sbjct: 344 LCCAGLRIQFGVSTKFLDSAGRPKLNILVDIPENLSKILEFCDGIAQKSSQDSGSTSEWR 403
Query: 185 PVVTRQS-GNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLK 243
P++ + N P RL IPT+V G+ A Y TE+Y+KE SG+IQKL F + D AELDS
Sbjct: 404 PLIKKYGYVNCPTVRLHIPTIVSGEAATYGTEIYQKEASGNIQKLVFSKVDVAELDSWFV 463
Query: 244 PGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLI 275
G VDAF SL+ YD YE++AGIRLVAKKL+
Sbjct: 464 RGNMVDAFFSLELYD--YEENAGIRLVAKKLV 493
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTV 98
+ASLA YFGLG+Q+HRSLDDVRMNLEVLKYCATVLFLE+ LP + TV
Sbjct: 171 MASLANYFGLGRQSHRSLDDVRMNLEVLKYCATVLFLEASLPGVLTV 217
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EIAFFDVET+ P GQ A+LEFGAILVCP+ L + Y+TL+
Sbjct: 29 EIAFFDVETSVPQRAGQGYALLEFGAILVCPRRLVVVGSYATLV 72
>gi|297797093|ref|XP_002866431.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312266|gb|EFH42690.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
Length = 484
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 112/160 (70%), Gaps = 6/160 (3%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P +L+C L++R+GI+ +F+D+AGR RL+FVVD SLC VL C+ A+ + DS S+S
Sbjct: 327 PLQLHCPHLRVRFGINGKFMDKAGRRRLNFVVDLYPSLCNVLQECDNAAQTISVDSGSDS 386
Query: 182 EWNPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDI--QKLEFVRFDAAE 237
+WNP V G N P AR+ IPT + GDV +YA E+++KE SG I QKL E
Sbjct: 387 DWNPAVIPMKGFLNCPTARIHIPTELNGDVDRYAAEIHQKEFSGAIATQKLISSNPKVGE 446
Query: 238 LDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIH 277
++SLL PGT +DAFLSL+PYD Y+Q AGIRLVA+KL+IH
Sbjct: 447 IESLLNPGTVLDAFLSLEPYD--YQQRAGIRLVARKLVIH 484
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVN 99
+A+LA+YFGLG QTHRSLDDVRMNLEVLKYCATVLFLES LPD N
Sbjct: 150 MATLASYFGLGNQTHRSLDDVRMNLEVLKYCATVLFLESSLPDELIEN 197
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 36/48 (75%)
Query: 5 QDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
+DR EIAFFDVET P GQ AILEFG+ILVCPK L EL+ YS L+
Sbjct: 8 EDRSEIAFFDVETTIPFRAGQGYAILEFGSILVCPKKLVELRNYSVLV 55
>gi|42568689|ref|NP_200947.3| exonuclease-like protein [Arabidopsis thaliana]
gi|111074224|gb|ABH04485.1| At5g61390 [Arabidopsis thaliana]
gi|332010078|gb|AED97461.1| exonuclease-like protein [Arabidopsis thaliana]
Length = 487
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 112/160 (70%), Gaps = 6/160 (3%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P +L+C RLK+R+GI+ +F+D+AGR RL+FV+D SLC VL C+ A+ + DS S S
Sbjct: 330 PLQLHCPRLKVRFGINGKFMDKAGRRRLNFVIDLYPSLCNVLQECDSAAQTISVDSGSGS 389
Query: 182 EWNPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSG--DIQKLEFVRFDAAE 237
+WNP+V G N P AR+ IPT + GD+ +YA E+++KE SG QKL A E
Sbjct: 390 DWNPLVIPMKGFLNCPTARIHIPTELNGDIDRYAAEIHQKEFSGATATQKLISSNPKAEE 449
Query: 238 LDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIH 277
++SLL P T +DAFLSL+PYD Y+Q AGIRLVA+KL+IH
Sbjct: 450 IESLLNPRTVLDAFLSLEPYD--YQQRAGIRLVARKLVIH 487
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 41/48 (85%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVN 99
+A+LATYFGLG QTHRSLDDVRMN EVLKYCATVLFLES LPD N
Sbjct: 153 MATLATYFGLGNQTHRSLDDVRMNFEVLKYCATVLFLESSLPDELIEN 200
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 38/52 (73%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
+ P +DR EIAFFDVET P GQ AILEFG+ILVCPK L EL+ YS L+
Sbjct: 7 LTPAEDRSEIAFFDVETTIPFRVGQGYAILEFGSILVCPKKLVELKNYSVLV 58
>gi|9757860|dbj|BAB08494.1| exonuclease-like protein [Arabidopsis thaliana]
Length = 500
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 112/160 (70%), Gaps = 6/160 (3%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P +L+C RLK+R+GI+ +F+D+AGR RL+FV+D SLC VL C+ A+ + DS S S
Sbjct: 343 PLQLHCPRLKVRFGINGKFMDKAGRRRLNFVIDLYPSLCNVLQECDSAAQTISVDSGSGS 402
Query: 182 EWNPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRKEPSG--DIQKLEFVRFDAAE 237
+WNP+V G N P AR+ IPT + GD+ +YA E+++KE SG QKL A E
Sbjct: 403 DWNPLVIPMKGFLNCPTARIHIPTELNGDIDRYAAEIHQKEFSGATATQKLISSNPKAEE 462
Query: 238 LDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIH 277
++SLL P T +DAFLSL+PYD Y+Q AGIRLVA+KL+IH
Sbjct: 463 IESLLNPRTVLDAFLSLEPYD--YQQRAGIRLVARKLVIH 500
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 35/37 (94%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFL 88
+A+LATYFGLG QTHRSLDDVRMN EVLKYCATVLFL
Sbjct: 150 MATLATYFGLGNQTHRSLDDVRMNFEVLKYCATVLFL 186
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 38/52 (73%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
+ P +DR EIAFFDVET P GQ AILEFG+ILVCPK L EL+ YS L+
Sbjct: 4 LTPAEDRSEIAFFDVETTIPFRVGQGYAILEFGSILVCPKKLVELKNYSVLV 55
>gi|242039735|ref|XP_002467262.1| hypothetical protein SORBIDRAFT_01g022250 [Sorghum bicolor]
gi|241921116|gb|EER94260.1| hypothetical protein SORBIDRAFT_01g022250 [Sorghum bicolor]
Length = 505
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 33/213 (15%)
Query: 98 VNRWEMCSAASVSEGSSGYARFMEPD------------------------------ELYC 127
+ ++ + + SSGY+ F+EPD +L C
Sbjct: 295 IEEMKLDTTTHMDASSSGYSGFLEPDDVSIECIEISVAPLHQFGRRSSIQHRDCPLQLCC 354
Query: 128 SRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEWNPVV 187
+ LK+++G+ST+F+D AGRP++S VV+ +SL VL+ C+ +A+KL ++S S+SEW P++
Sbjct: 355 AGLKVQFGVSTKFLDNAGRPKMSIVVEIPESLSKVLEFCDDLARKLSQESGSSSEWRPLI 414
Query: 188 TRQS-GNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGT 246
+ N P RL IPT+ + Y+T++ +KEP+G IQKL+F ELDSL G+
Sbjct: 415 KKYGYVNRPTVRLNIPTIANSNATAYSTDICQKEPTGSIQKLDFSNVATTELDSLFVKGS 474
Query: 247 FVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
VDAF S + YD Y+Q+AGIRLVAK+L++HS
Sbjct: 475 KVDAFFSPELYD--YQQNAGIRLVAKRLVVHSN 505
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTV-NRWEMCSAASVS 110
+ASLA YFGLG+Q HRSLDDVRMNLEVLKYCATVLFLE+ LP++ TV N E + S +
Sbjct: 179 MASLANYFGLGKQRHRSLDDVRMNLEVLKYCATVLFLEASLPEVLTVENLVERATTRSRA 238
Query: 111 EG 112
G
Sbjct: 239 NG 240
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
+ P + EIAFFDVET+ P GQ A+LEFGAILVCP+ L E+ Y+TL+
Sbjct: 32 LPPGEGGPEIAFFDVETSVPQRAGQGYALLEFGAILVCPRRLVEVASYATLV 83
>gi|242035185|ref|XP_002464987.1| hypothetical protein SORBIDRAFT_01g029940 [Sorghum bicolor]
gi|241918841|gb|EER91985.1| hypothetical protein SORBIDRAFT_01g029940 [Sorghum bicolor]
Length = 435
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 154/287 (53%), Gaps = 66/287 (22%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASV-S 110
LASLA YFGLG+Q HRSLDDV+MN++VLK CATVLFLE L + V M A++ +
Sbjct: 153 LASLANYFGLGKQRHRSLDDVKMNIDVLKNCATVLFLEESLRGVLPVQ--NMLEGATIRT 210
Query: 111 EGSS---------------------------------GYARFMEPDELYCSRLKI----- 132
+G+S G++ F+E D++ +KI
Sbjct: 211 QGTSDPATNRDSNELVGSHVEEMVLDTTTQMDARSSIGFSGFVEVDDVSIESIKISVMLL 270
Query: 133 --RYG------------------ISTRFVD-QAGRPRLSFVVDASQSLCTVLDACEVVAK 171
R G + R+V + RP+LS VD +L VL C+ +A+
Sbjct: 271 QHRSGPRTILQHKGAQLHLSCADLEVRWVSSKVLRPQLSIRVDIPDNLSKVLVFCDNLAQ 330
Query: 172 KLFEDSRSNSEWNPVVTR-QSGNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEF 230
+ RS+S W P++ R + N P RL IPTVV G+ A Y+T++Y+K+ +G I KL
Sbjct: 331 SSSPEGRSSSPWKPLIKRYGNANRPTVRLNIPTVVSGNTAMYSTQIYQKDCNGVIPKLAS 390
Query: 231 VRFDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIH 277
+ DAA L+S+L+ G VDAF SL+ Y Y+Q+AGIRLVAK+L +H
Sbjct: 391 RKIDAANLESMLQ-GKKVDAFFSLEIYG--YQQNAGIRLVAKRLDVH 434
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Query: 7 RFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
R EI F DVET+ P R+ +LEFGA++VC + L ++ Y+TL+
Sbjct: 17 REEIVFLDVETSTP----PRV-LLEFGAVVVCSRRLVDVSSYATLV 57
>gi|326496743|dbj|BAJ98398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 124 ELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNSEW 183
L C+ L I++G+ T+F+D AGR + + +VD ++L VL+ C+ A++ +DS + SEW
Sbjct: 331 HLCCAGLNIQFGVGTKFLDTAGRQKFNMLVDIPENLSKVLEFCDNQAQRFLQDSGTTSEW 390
Query: 184 NPVVTRQS-GNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLL 242
P++ + N P RL IPT D Y+T++Y+K PSG+IQKL F + DAAELDSL
Sbjct: 391 RPLIKKYGYVNRPTVRLNIPTTASSDAPPYSTDIYQKGPSGNIQKLAFSKVDAAELDSLF 450
Query: 243 KPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIHSE 279
G +DAF SL+ YD Y+Q+AGIRLVAK+L++HS+
Sbjct: 451 VRGNRLDAFFSLEIYD--YQQNAGIRLVAKRLVVHSK 485
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+ASLA YFGLG+Q HRSLDDVRMNLEVLKYCATVLFLE+ LP++ V S ++
Sbjct: 163 MASLANYFGLGRQKHRSLDDVRMNLEVLKYCATVLFLEASLPEVLIVENLVGTITRSKTD 222
Query: 112 GSS 114
G++
Sbjct: 223 GAT 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EIAFFD+ET+ P GQ A+LEFGAILVCP+ L E+ Y+TL+
Sbjct: 25 EIAFFDLETSVPQRAGQGYALLEFGAILVCPRRLVEVACYATLV 68
>gi|297842185|ref|XP_002888974.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
gi|297334815|gb|EFH65233.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
Length = 506
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 103/159 (64%), Gaps = 5/159 (3%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P L LKIR+GIS +FVD AG PRL+ VVD +LC +LDA + A L DS +NS
Sbjct: 347 PLHLCWYSLKIRFGISRKFVDHAGHPRLNIVVDIPPALCKILDAADAAAHNLPIDSSTNS 406
Query: 182 EWNPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRK-EPSGDIQKLEFVRFDAAEL 238
+W P V R+ G N P ARL+I + GD + T++Y+K EP QKL+F + +L
Sbjct: 407 DWRPTVIRKEGFANYPTARLQISSESNGDDTRCGTQLYQKEEPLETNQKLDFSSDNLEKL 466
Query: 239 DSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIH 277
+S L PGT VDAF SL+PYD Y+Q AGIRL A+KL+IH
Sbjct: 467 ESALLPGTLVDAFFSLEPYD--YQQMAGIRLTARKLVIH 503
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 43/50 (86%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRW 101
+ASLATYFGLG Q HRSLDDVRMNLEV+KYCATVLFLES +PDI T W
Sbjct: 150 MASLATYFGLGDQAHRSLDDVRMNLEVVKYCATVLFLESSVPDILTDMSW 199
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 36/47 (76%)
Query: 6 DRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
+R EIAFFD+ETA P GQ AILEFGAILVCP+ L EL YSTL+
Sbjct: 9 ERSEIAFFDLETAVPTKSGQPFAILEFGAILVCPRKLVELYSYSTLV 55
>gi|334183910|ref|NP_001185397.1| polynucleotidyl transferase, ribonuclease H-like protein
[Arabidopsis thaliana]
gi|332197465|gb|AEE35586.1| polynucleotidyl transferase, ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 495
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 5/158 (3%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P L LK+R+GIS +FVD AGRP+L+ +VDA LC +LDA + A L DS +NS
Sbjct: 336 PLHLCWHSLKVRFGISRKFVDHAGRPKLNIIVDAPLDLCKILDAVDAAAHNLPTDSSTNS 395
Query: 182 EWNPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRK-EPSGDIQKLEFVRFDAAEL 238
+W P V R+ G N P ARL I + GD T++Y+K EP G QKL+ + +L
Sbjct: 396 DWRPTVIRKEGFANYPTARLHISSESNGDDTLCGTQVYQKEEPLGTNQKLDVSSDNLEKL 455
Query: 239 DSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLII 276
+S L PGT VDAF SL+PY Y+Q AGIRL KKL+I
Sbjct: 456 ESALLPGTLVDAFFSLEPYS--YQQMAGIRLAVKKLVI 491
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 37/47 (78%)
Query: 6 DRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
+R EIAFFD+ETA P G+ AILEFGAILVCP+ LEEL YSTL+
Sbjct: 9 ERSEIAFFDLETAVPTKSGEPFAILEFGAILVCPRRLEELYSYSTLV 55
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 32/50 (64%), Gaps = 11/50 (22%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRW 101
+ASLATYFGLG Q HRSLDDVRMNLE ES +PDI T W
Sbjct: 150 MASLATYFGLGDQAHRSLDDVRMNLE-----------ESSVPDILTDMSW 188
>gi|15221225|ref|NP_177579.1| polynucleotidyl transferase, ribonuclease H-like protein
[Arabidopsis thaliana]
gi|12324816|gb|AAG52378.1|AC011765_30 putative exonuclease; 20146-18080 [Arabidopsis thaliana]
gi|20466502|gb|AAM20568.1| putative exonuclease [Arabidopsis thaliana]
gi|23198160|gb|AAN15607.1| putative exonuclease [Arabidopsis thaliana]
gi|332197464|gb|AEE35585.1| polynucleotidyl transferase, ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 506
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 5/158 (3%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P L LK+R+GIS +FVD AGRP+L+ +VDA LC +LDA + A L DS +NS
Sbjct: 347 PLHLCWHSLKVRFGISRKFVDHAGRPKLNIIVDAPLDLCKILDAVDAAAHNLPTDSSTNS 406
Query: 182 EWNPVVTRQSG--NDPAARLRIPTVVFGDVAQYATEMYRK-EPSGDIQKLEFVRFDAAEL 238
+W P V R+ G N P ARL I + GD T++Y+K EP G QKL+ + +L
Sbjct: 407 DWRPTVIRKEGFANYPTARLHISSESNGDDTLCGTQVYQKEEPLGTNQKLDVSSDNLEKL 466
Query: 239 DSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLII 276
+S L PGT VDAF SL+PY Y+Q AGIRL KKL+I
Sbjct: 467 ESALLPGTLVDAFFSLEPYS--YQQMAGIRLAVKKLVI 502
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 43/50 (86%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRW 101
+ASLATYFGLG Q HRSLDDVRMNLEV+KYCATVLFLES +PDI T W
Sbjct: 150 MASLATYFGLGDQAHRSLDDVRMNLEVVKYCATVLFLESSVPDILTDMSW 199
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 37/47 (78%)
Query: 6 DRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
+R EIAFFD+ETA P G+ AILEFGAILVCP+ LEEL YSTL+
Sbjct: 9 ERSEIAFFDLETAVPTKSGEPFAILEFGAILVCPRRLEELYSYSTLV 55
>gi|194698552|gb|ACF83360.1| unknown [Zea mays]
gi|195655181|gb|ACG47058.1| hypothetical protein [Zea mays]
gi|414867638|tpg|DAA46195.1| TPA: hypothetical protein ZEAMMB73_898479 [Zea mays]
Length = 366
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 133/306 (43%), Gaps = 82/306 (26%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASV-- 109
LASLA YFGLG+Q HRSLDDV+MN++V K CATVLFLE L + M S +
Sbjct: 56 LASLANYFGLGKQRHRSLDDVKMNIDVFKNCATVLFLEESLRGVRVPTVQNMSSGGATIR 115
Query: 110 ------------------------------------------SEGSSGYARFMEPDELYC 127
+ S ++ F+E D++
Sbjct: 116 TQGITSDPAPNRDNPNESLLVGSSTVHVEEMMLDTTVTVQTDTRSSGAFSGFVELDDVST 175
Query: 128 SRLKIRY-------------------------GISTRFVDQAG------RPRLSFVVDAS 156
+KI G+ +V+ G RP++ VD
Sbjct: 176 ESIKISAPLFLRPFGPRAIVQHKGSPLQLICPGLEVLWVNTKGFPNSPHRPKVGIKVDIP 235
Query: 157 QSLCTVLDACEVVAKKLFEDSR-----SNSEWNPVVTRQSGNDPAARLRIPTVVFGDVAQ 211
++L VL C+ +A+ SNS W ++ R + P L+IPT GD A
Sbjct: 236 ENLSKVLGFCDDLAQSSSSSPGPGAICSNSRWKSLIERDADRRPTVWLKIPTFGSGDTAA 295
Query: 212 YATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVA 271
T +Y KE G + +L R D +EL S+L+ VDAF+S++ +D+ QSAGIRLVA
Sbjct: 296 CRTHVYEKECDGVVPRLVSERVDPSELASMLQGNKVVDAFVSVETFDHY--QSAGIRLVA 353
Query: 272 KKLIIH 277
+L +H
Sbjct: 354 NRLDVH 359
>gi|226503946|ref|NP_001140253.1| uncharacterized protein LOC100272294 [Zea mays]
gi|194698700|gb|ACF83434.1| unknown [Zea mays]
gi|223944519|gb|ACN26343.1| unknown [Zea mays]
gi|414867636|tpg|DAA46193.1| TPA: hypothetical protein ZEAMMB73_898479 [Zea mays]
gi|414867637|tpg|DAA46194.1| TPA: hypothetical protein ZEAMMB73_898479 [Zea mays]
Length = 370
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 133/306 (43%), Gaps = 82/306 (26%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASV-- 109
LASLA YFGLG+Q HRSLDDV+MN++V K CATVLFLE L + M S +
Sbjct: 60 LASLANYFGLGKQRHRSLDDVKMNIDVFKNCATVLFLEESLRGVRVPTVQNMSSGGATIR 119
Query: 110 ------------------------------------------SEGSSGYARFMEPDELYC 127
+ S ++ F+E D++
Sbjct: 120 TQGITSDPAPNRDNPNESLLVGSSTVHVEEMMLDTTVTVQTDTRSSGAFSGFVELDDVST 179
Query: 128 SRLKIRY-------------------------GISTRFVDQAG------RPRLSFVVDAS 156
+KI G+ +V+ G RP++ VD
Sbjct: 180 ESIKISAPLFLRPFGPRAIVQHKGSPLQLICPGLEVLWVNTKGFPNSPHRPKVGIKVDIP 239
Query: 157 QSLCTVLDACEVVAKKLFEDSR-----SNSEWNPVVTRQSGNDPAARLRIPTVVFGDVAQ 211
++L VL C+ +A+ SNS W ++ R + P L+IPT GD A
Sbjct: 240 ENLSKVLGFCDDLAQSSSSSPGPGAICSNSRWKSLIERDADRRPTVWLKIPTFGSGDTAA 299
Query: 212 YATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVA 271
T +Y KE G + +L R D +EL S+L+ VDAF+S++ +D+ QSAGIRLVA
Sbjct: 300 CRTHVYEKECDGVVPRLVSERVDPSELASMLQGNKVVDAFVSVETFDHY--QSAGIRLVA 357
Query: 272 KKLIIH 277
+L +H
Sbjct: 358 NRLDVH 363
>gi|224029725|gb|ACN33938.1| unknown [Zea mays]
gi|414867639|tpg|DAA46196.1| TPA: hypothetical protein ZEAMMB73_898479 [Zea mays]
Length = 457
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 133/306 (43%), Gaps = 82/306 (26%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASV-- 109
LASLA YFGLG+Q HRSLDDV+MN++V K CATVLFLE L + M S +
Sbjct: 147 LASLANYFGLGKQRHRSLDDVKMNIDVFKNCATVLFLEESLRGVRVPTVQNMSSGGATIR 206
Query: 110 ------------------------------------------SEGSSGYARFMEPDELYC 127
+ S ++ F+E D++
Sbjct: 207 TQGITSDPAPNRDNPNESLLVGSSTVHVEEMMLDTTVTVQTDTRSSGAFSGFVELDDVST 266
Query: 128 SRLKIRY-------------------------GISTRFVDQAG------RPRLSFVVDAS 156
+KI G+ +V+ G RP++ VD
Sbjct: 267 ESIKISAPLFLRPFGPRAIVQHKGSPLQLICPGLEVLWVNTKGFPNSPHRPKVGIKVDIP 326
Query: 157 QSLCTVLDACEVVAKKLFEDSR-----SNSEWNPVVTRQSGNDPAARLRIPTVVFGDVAQ 211
++L VL C+ +A+ SNS W ++ R + P L+IPT GD A
Sbjct: 327 ENLSKVLGFCDDLAQSSSSSPGPGAICSNSRWKSLIERDADRRPTVWLKIPTFGSGDTAA 386
Query: 212 YATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVA 271
T +Y KE G + +L R D +EL S+L+ VDAF+S++ +D+ QSAGIRLVA
Sbjct: 387 CRTHVYEKECDGVVPRLVSERVDPSELASMLQGNKVVDAFVSVETFDHY--QSAGIRLVA 444
Query: 272 KKLIIH 277
+L +H
Sbjct: 445 NRLDVH 450
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 6 DRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
DR EI F DVET+ P +LEFGA++VC + L ++ ++TL+
Sbjct: 11 DREEIVFLDVETSTPP-----CVLLEFGAVVVCSRRLVDVSSFATLV 52
>gi|195657335|gb|ACG48135.1| hypothetical protein [Zea mays]
Length = 458
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSR--- 178
P +L C L++ + + F + RP++ VD ++L VL C+ +A+
Sbjct: 293 PLQLICPGLEVLWVNTKGFPNSPHRPKVGIKVDIPENLSKVLGFCDDLAQSSSSSPGPGA 352
Query: 179 --SNSEWNPVVTRQSGNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAA 236
SNS W ++ R + P L+IPT GD A T +Y KE G + +L R D +
Sbjct: 353 ICSNSRWKSLIERDADRRPTVWLKIPTFGSGDTAACRTHVYEKECDGVVPRLVSERVDPS 412
Query: 237 ELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIH 277
EL S+L+ VDAF+S++ +D+ QSAGIRLVA +L +H
Sbjct: 413 ELASMLQGNKVVDAFVSVETFDHY--QSAGIRLVANRLDVH 451
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 39/57 (68%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAAS 108
LASLA YFGLG+Q HRSLDDV+MN++V K CATVLFLE L + M S +
Sbjct: 147 LASLANYFGLGKQRHRSLDDVKMNIDVFKNCATVLFLEESLRGVRVPTVQNMSSGGA 203
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 6 DRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
DR EI F DVET+ P +LEFGA++VC + L E+ ++TL+
Sbjct: 11 DREEIVFLDVETSTPP-----CVLLEFGAVVVCSRRLVEVSSFATLV 52
>gi|302773940|ref|XP_002970387.1| hypothetical protein SELMODRAFT_411374 [Selaginella moellendorffii]
gi|300161903|gb|EFJ28517.1| hypothetical protein SELMODRAFT_411374 [Selaginella moellendorffii]
Length = 319
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 118/299 (39%), Gaps = 79/299 (26%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIF--------------- 96
L++LA YF LG+Q HRSL DVRMN++VLK CATVL LES P +F
Sbjct: 27 LSTLAAYFSLGKQEHRSLPDVRMNIKVLKRCATVLLLESNFPHLFQSSPQAPQKRRRSSY 86
Query: 97 ---------TVNRWEM--------CSAASVS--------------EGSSGYARFMEPDEL 125
T++ E C A E + RF++P E+
Sbjct: 87 GGGDDFRLVTLSLEEAMLQLEGGECEAIDPKMQNEEQEVKRKLKFETGEDHNRFLQPHEV 146
Query: 126 YCSRLK---------IRYGISTRFVDQAGRPRLSF------------------VVDASQS 158
+ I + S R QA ++ F V+ S
Sbjct: 147 LLDSVGAVYDGGPSVIPFHGSNRLCVQADNSKVKFSVSDRYAFSETGMPTFKIVIIPSAE 206
Query: 159 LCTVLDACEVVAKKLFEDSRSNSEWNPVVTRQSGNDPAARLRIPTVVFGDVAQYATEMYR 218
L ++ CE K N++W P + A R+RI T G A Y T++YR
Sbjct: 207 LLAIVKHCEAAVKNKCALFGINAKWQPALFVTKDGHEAIRIRIGTNGEGSSATYTTKLYR 266
Query: 219 KEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIH 277
++Q++ D ++ VDA + D Y + SAG++L+A+KL +H
Sbjct: 267 -----NLQEVSLGSVDPKSFREIVPADYIVDAAIQFDAYAF-ERGSAGLKLLAEKLNLH 319
>gi|296082445|emb|CBI21450.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LATYFGLGQQ HRSLDDVRMNLEVLK+CATVLFLES LP + + +W + +
Sbjct: 152 MATLATYFGLGQQKHRSLDDVRMNLEVLKHCATVLFLESSLPSVLS-GKWHDSTTITTRS 210
Query: 112 GSSG 115
S+G
Sbjct: 211 RSNG 214
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 2 DPRQDRF-EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
D Q+R EI FFD+ET PN GQR +LEFGAI+VCP+ L EL+ YSTL+
Sbjct: 6 DSSQERAAEIVFFDLETTVPNRAGQRFWVLEFGAIVVCPRKLVELESYSTLI 57
>gi|147791948|emb|CAN61478.1| hypothetical protein VITISV_013817 [Vitis vinifera]
Length = 293
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LATYFGLGQQ HRSLDDVRMNLEVLK+CATVLFLES LP + + +W + +
Sbjct: 185 MATLATYFGLGQQKHRSLDDVRMNLEVLKHCATVLFLESSLPSVLS-GKWHDSTTITTRS 243
Query: 112 GSSG 115
S+G
Sbjct: 244 RSNG 247
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 2 DPRQDRF-EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
D Q+R EI FFD+ET PN GQR +LEFGAI+VCP+ L EL+ YSTL+
Sbjct: 39 DSSQERAAEIVFFDLETTVPNRAGQRFWVLEFGAIVVCPRKLVELESYSTLI 90
>gi|110289067|gb|ABG66074.1| exonuclease family protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 267
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTV 98
+ASLA YFGLG+Q+HRSLDDVRMNLEVLKYCATVLFLE+ LP + TV
Sbjct: 167 MASLANYFGLGRQSHRSLDDVRMNLEVLKYCATVLFLEASLPGVLTV 213
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EIAFFDVET+ P GQ A+LEFGAILVCP+ L + Y+TL+
Sbjct: 29 EIAFFDVETSVPQRAGQGYALLEFGAILVCPRRLVVVGSYATLV 72
>gi|413919248|gb|AFW59180.1| hypothetical protein ZEAMMB73_288968 [Zea mays]
Length = 596
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 122 PDELYCSRLKIRYGISTRFVDQAGRPRLSFVVDASQSLCTVLDACEVVAKKLFEDSRSNS 181
P +L C L++R+ + F + RP++S VD ++L + SNS
Sbjct: 359 PLQLICPGLEVRWVNTKGFPNSPHRPKVSIKVDVPENLSKSSSSSPGPGAIC-----SNS 413
Query: 182 EWNPVVTRQSGNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSL 241
W ++ R + P L+IPT G A T +Y KE G + +L R D +ELDS+
Sbjct: 414 GWESLIDRDADPRPTVWLKIPTFGNGHTAVCWTHVYLKECDGVVPRLVSERVDPSELDSM 473
Query: 242 LKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKL 274
L+ VDAF+S++ +D + QSAGIRLVAK+L
Sbjct: 474 LQGNKVVDAFVSVETFD--HHQSAGIRLVAKRL 504
>gi|449451459|ref|XP_004143479.1| PREDICTED: DNA polymerase III PolC-type-like [Cucumis sativus]
gi|449504833|ref|XP_004162307.1| PREDICTED: DNA polymerase III PolC-type-like [Cucumis sativus]
Length = 269
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+ASLA+YF LGQQ HRSLDDVRMNLEVLK+CATVLFLES LP I +W+ S +
Sbjct: 155 MASLASYFQLGQQKHRSLDDVRMNLEVLKHCATVLFLESTLPSILQ-EKWKTSSTKTTRS 213
Query: 112 GSSG 115
++G
Sbjct: 214 RANG 217
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FFD+ET P GQR +LEFGAI+VCP L EL+ ++TL+
Sbjct: 17 EIVFFDLETTVPKRVGQRFRVLEFGAIVVCPMKLVELESFTTLI 60
>gi|356511111|ref|XP_003524273.1| PREDICTED: uncharacterized protein LOC100805245 [Glycine max]
Length = 276
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 16/113 (14%)
Query: 7 RFEIAFFDVETAFPNPPG--QRIAIL--EFGAILVCPKTLEELQPYSTLLASLATYFGLG 62
R + AF D+ + P P G + +L +FG + + +A+LA+YFGLG
Sbjct: 114 RIKEAFNDINRSAPVPVGIIDSLGVLTEKFGR-----------RAGNMKMATLASYFGLG 162
Query: 63 QQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSEGSSG 115
QQ HRSLDDVRMNLEVLK+CATVLFLES LP+ ++W S+ S G
Sbjct: 163 QQKHRSLDDVRMNLEVLKHCATVLFLESSLPNTLH-SKWYGSSSVMTRSRSDG 214
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 5 QDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
Q EI FFD+ET P G+R +LEFGAI+V P L E++ Y+TL+
Sbjct: 10 QQALEIVFFDLETTVPKRGGERFWVLEFGAIVVTPHKLTEIESYTTLI 57
>gi|357519533|ref|XP_003630055.1| DNA polymerase III polC-type [Medicago truncatula]
gi|355524077|gb|AET04531.1| DNA polymerase III polC-type [Medicago truncatula]
Length = 281
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 49/58 (84%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASV 109
+A+LA+YFGLGQQ HRSLDDVRMNLEV+K+CATVLFLES LP+ +++ + ++S+
Sbjct: 154 MATLASYFGLGQQKHRSLDDVRMNLEVVKHCATVLFLESTLPNTLHIDKSKWYGSSSI 211
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FFD+ET P GQR +LEFGAI+V L E++ Y+TL+
Sbjct: 16 EIVFFDLETNVPKKIGQRFWVLEFGAIVVSAHKLSEIESYTTLI 59
>gi|356528495|ref|XP_003532838.1| PREDICTED: uncharacterized protein LOC100791906 [Glycine max]
Length = 276
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 42/45 (93%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIF 96
+A+LA+YFGLGQQ HRSLDDVRMNLEVLK+CATVLFLES LP++
Sbjct: 152 MATLASYFGLGQQKHRSLDDVRMNLEVLKHCATVLFLESSLPNML 196
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FFD+ET P G+R +LEFGAI+V P L E++ Y+TL+
Sbjct: 14 EIVFFDLETTVPKKGGERFWVLEFGAIVVTPHKLTEIESYTTLI 57
>gi|168812233|gb|ACA30292.1| putative exonuclease family protein [Cupressus sempervirens]
Length = 160
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 176 DSRSNSEWNPVVTRQSG---NDPAARLRIPTVVFGDVAQYATEMYRKEPSGDIQKLEFVR 232
+ NSEW P+VT ++G + P R+ I T G+ A Y T++Y ++ +G ++L
Sbjct: 2 ECNGNSEWRPLVTTKNGVVISTPTIRINIATQGAGETATYCTDLYERDSAGTTKRLSLTN 61
Query: 233 FDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLII 276
D ELD L G VDA S D YD Y+Q+AGIRLVAK+L +
Sbjct: 62 VDVDELDKLFVYGRLVDADYSFDIYD--YKQNAGIRLVAKRLTV 103
>gi|147811962|emb|CAN63719.1| hypothetical protein VITISV_005736 [Vitis vinifera]
Length = 255
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 201 IPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYV 260
+PT GD+ YATE YRK+ S Q+ F RFDAAELD+L PGT VDA +LD Y+
Sbjct: 1 MPTTANGDITIYATETYRKDSSXITQRPIFSRFDAAELDTLFIPGTLVDASFALDSYN-- 58
Query: 261 YEQSAGIRLVAKKLIIHSE 279
++ + GI LV+K+LIIH++
Sbjct: 59 HQLNVGIWLVSKRLIIHAK 77
>gi|240256240|ref|NP_195691.4| exonuclease/ nucleic acid binding protein [Arabidopsis thaliana]
gi|332661722|gb|AEE87122.1| exonuclease/ nucleic acid binding protein [Arabidopsis thaliana]
Length = 255
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 16/103 (15%)
Query: 7 RFEIAFFDVETAFPNPPG--QRIAIL--EFGAILVCPKTLEELQPYSTLLASLATYFGLG 62
R + AF ++ A P P G + +L +FG + + +ASLA YFGLG
Sbjct: 109 RIKEAFAEIGKAAPEPSGIIDSLGLLSDKFGK-----------RAGNMKMASLAAYFGLG 157
Query: 63 QQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCS 105
Q HRSLDDVRMNLEVLK+CATVLFLES LP+ +W S
Sbjct: 158 VQKHRSLDDVRMNLEVLKHCATVLFLESTLPNHLE-GKWHTSS 199
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FFD+ET PN GQ ILEFGAI+VCPK LEEL+ ++TL+
Sbjct: 9 EIVFFDLETNVPNKAGQHFHILEFGAIIVCPKKLEELESFTTLI 52
>gi|224083745|ref|XP_002307108.1| predicted protein [Populus trichocarpa]
gi|222856557|gb|EEE94104.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LATYFGLGQQ HRSL+DVRMNLEVLK+CA VLF+ES LP + +W S
Sbjct: 149 MATLATYFGLGQQKHRSLEDVRMNLEVLKHCAAVLFVESSLPSVMN-GKWHNPSTMVTRS 207
Query: 112 GSSG 115
S+G
Sbjct: 208 RSNG 211
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FFD+ET PN GQR +LEFGAI+VCP+ L EL YSTL+
Sbjct: 11 EIVFFDLETTVPNKAGQRFWVLEFGAIIVCPRKLVELDSYSTLI 54
>gi|297802094|ref|XP_002868931.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314767|gb|EFH45190.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 16/103 (15%)
Query: 7 RFEIAFFDVETAFPNPPG--QRIAIL--EFGAILVCPKTLEELQPYSTLLASLATYFGLG 62
R + AF ++ A P P G + +L +FG + + +ASLA YFGLG
Sbjct: 109 RIKEAFAEIGKAAPEPSGIIDSLGLLSDKFGK-----------RAGNMKMASLAAYFGLG 157
Query: 63 QQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCS 105
Q HRSLDDVRMNLEVLK+CATVLFLES LP+ +W+ S
Sbjct: 158 VQKHRSLDDVRMNLEVLKHCATVLFLESTLPNQLE-GKWQSSS 199
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FFD+ET PN GQ ILEFGAI+VCP+ LEEL+ ++TL+
Sbjct: 9 EIVFFDLETTVPNKVGQYFHILEFGAIIVCPRKLEELESFTTLI 52
>gi|3080450|emb|CAA18767.1| hypothetical protein [Arabidopsis thaliana]
gi|7270965|emb|CAB80644.1| hypothetical protein [Arabidopsis thaliana]
Length = 236
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 16/103 (15%)
Query: 7 RFEIAFFDVETAFPNPPG--QRIAIL--EFGAILVCPKTLEELQPYSTLLASLATYFGLG 62
R + AF ++ A P P G + +L +FG + + +ASLA YFGLG
Sbjct: 109 RIKEAFAEIGKAAPEPSGIIDSLGLLSDKFGK-----------RAGNMKMASLAAYFGLG 157
Query: 63 QQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCS 105
Q HRSLDDVRMNLEVLK+CATVLFLES LP+ +W S
Sbjct: 158 VQKHRSLDDVRMNLEVLKHCATVLFLESTLPNHLE-GKWHTSS 199
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FFD+ET PN GQ ILEFGAI+VCPK LEEL+ ++TL+
Sbjct: 9 EIVFFDLETNVPNKAGQHFHILEFGAIIVCPKKLEELESFTTLI 52
>gi|224096223|ref|XP_002310581.1| predicted protein [Populus trichocarpa]
gi|222853484|gb|EEE91031.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%), Gaps = 3/58 (5%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASV 109
+A+LA YFGLG+Q HRSLDDVRMNLEVLK+CATVLFLES LP + +W C+ +++
Sbjct: 151 MATLAAYFGLGKQKHRSLDDVRMNLEVLKHCATVLFLESCLPSVSNA-KW--CNPSTI 205
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 31/44 (70%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FD+ET PN GQR +LEFGAI VCP+ L EL YSTL+
Sbjct: 13 EIVVFDLETTVPNRAGQRFRVLEFGAITVCPRKLVELDSYSTLI 56
>gi|226493850|ref|NP_001151909.1| exonuclease [Zea mays]
gi|195650883|gb|ACG44909.1| exonuclease [Zea mays]
gi|413950294|gb|AFW82943.1| exonuclease [Zea mays]
Length = 302
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LATYFG+G+Q HR LDD RMNLEVLK+CATVL LES LPD+ + A+V+
Sbjct: 143 MATLATYFGIGKQKHRGLDDARMNLEVLKHCATVLLLESSLPDVLCA---QQSRRAAVTR 199
Query: 112 GSSGYARFMEPDELYCSRLKIRYG 135
+S A+ ++P + +R G
Sbjct: 200 RTS-QAQTIKPPPKHAVHHHLRPG 222
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 7 RFEIAFFDVETAFPNPPGQ-RIAILEFGAILVCPKTLEELQPYSTLL 52
R EI FFDVET P+ G R +LEFGAILVCP+ L E+ Y TL+
Sbjct: 4 RDEIVFFDVETTAPSAAGPGRWWLLEFGAILVCPRKLVEVGSYDTLI 50
>gi|218184559|gb|EEC66986.1| hypothetical protein OsI_33672 [Oryza sativa Indica Group]
Length = 417
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 201 IPTVVFGDVAQYATEMYRKEPSGDIQKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYV 260
IP V GD A YATE+Y KE SG I+K +F + + AEL+ + G VDAF S++ YD
Sbjct: 341 IPIVGSGDDATYATEIYLKEASGKIRKKDFSKAEVAELEFMFFRGDMVDAFFSVELYD-- 398
Query: 261 YEQSAGIRLVAKKLIIH 277
Y+ +AGIRLVAKKL++H
Sbjct: 399 YKNNAGIRLVAKKLVVH 415
>gi|297727559|ref|NP_001176143.1| Os10g0407400 [Oryza sativa Japonica Group]
gi|255679391|dbj|BAH94871.1| Os10g0407400 [Oryza sativa Japonica Group]
Length = 109
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 166 CEVVAKKLFEDSRSNSEWNPVVTRQSGNDPAARLRIPTVVFGDVAQYATEMYRKEPSGDI 225
C ++ + L+ D R N + + L IP + GD A YA E+Y KE SG+I
Sbjct: 5 CSIICRSLY-DVRMNLDVLKCCS------TVLFLVIPIIGSGDDATYAIEIYLKEASGNI 57
Query: 226 QKLEFVRFDAAELDSLLKPGTFVDAFLSLDPYDYVYEQSAGIRLVAKKLIIH 277
+K +F + D AEL+ + G VDAF S++ Y+ Y+ +AGIRLVAKKL++H
Sbjct: 58 RKKDFSKADVAELEFMFFRGDMVDAFFSVELYN--YKNNAGIRLVAKKLVVH 107
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 67 RSLDDVRMNLEVLKYCATVLFL 88
RSL DVRMNL+VLK C+TVLFL
Sbjct: 10 RSLYDVRMNLDVLKCCSTVLFL 31
>gi|413942456|gb|AFW75105.1| hypothetical protein ZEAMMB73_060834 [Zea mays]
Length = 308
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 15/94 (15%)
Query: 7 RFEIAFFDVETAFPNPPGQ----RIAILEFGAILVCPKTLEELQPYSTLLASLATYFGLG 62
R AF D+ P P G + EFG + +L+ +A+LATYFG+G
Sbjct: 103 RIREAFADIGRPAPEPAGVIDSLNVLAAEFG------RRAGDLK-----MATLATYFGIG 151
Query: 63 QQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIF 96
+Q HRSLDD RMNLEVLK+CATVL LES LP +
Sbjct: 152 KQKHRSLDDARMNLEVLKHCATVLLLESSLPHVL 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 7 RFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
R EI F DVET P G R +LEFGAILVCP+ L E+ Y TL+
Sbjct: 6 RDEIVFLDVETTAPTSAG-RWWLLEFGAILVCPRKLVEVGSYDTLI 50
>gi|242086513|ref|XP_002439089.1| hypothetical protein SORBIDRAFT_09g000300 [Sorghum bicolor]
gi|241944374|gb|EES17519.1| hypothetical protein SORBIDRAFT_09g000300 [Sorghum bicolor]
Length = 319
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 39/45 (86%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIF 96
+A+LATYFG+G+Q HRSLDD RMNLEVLK+CATVL LES LP +
Sbjct: 143 MATLATYFGIGKQKHRSLDDARMNLEVLKHCATVLLLESSLPHVL 187
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FFDVET P P G R +LEFGAILVCP+ L E+ Y TL+
Sbjct: 10 EIVFFDVETTAPTPAG-RWWLLEFGAILVCPRKLVEVASYDTLI 52
>gi|383100770|emb|CCG48001.1| exonuclease, putative [Triticum aestivum]
Length = 282
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 38/42 (90%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLP 93
+A+LA YFG+G+QTHRSLDDVRMNLEVLK+CA VL LES LP
Sbjct: 149 MATLAAYFGIGKQTHRSLDDVRMNLEVLKHCAAVLMLESNLP 190
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 9 EIAFFDVETAF---PNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
E+ FFDVETA P+ + +LEFGAILVCP+ L EL YSTL+
Sbjct: 9 EMVFFDVETAAAPSPSDSSGQWWLLEFGAILVCPRRLVELASYSTLI 55
>gi|300681549|emb|CBH32646.1| exonuclease, putative [Triticum aestivum]
Length = 283
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 38/42 (90%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLP 93
+A+LA YFG+G+QTHRSLDDVRMNLEVLK+CA VL LES LP
Sbjct: 148 MATLAAYFGIGKQTHRSLDDVRMNLEVLKHCAAVLMLESNLP 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 9 EIAFFDVETAF---PNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
E+ FFDVETA P + +LEFGAILVCP+ L EL YSTL+
Sbjct: 8 EMVFFDVETAAAPSPTDASTQWWLLEFGAILVCPRRLVELSSYSTLI 54
>gi|449533437|ref|XP_004173682.1| PREDICTED: uncharacterized protein LOC101223607, partial [Cucumis
sativus]
Length = 146
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 1 MDPRQDRFEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
M P +DR EIAFFDVET P GQ+ +ILEFGAILVCPK L EL+ YSTL+
Sbjct: 1 MGPTEDRSEIAFFDVETTVPTRQGQKFSILEFGAILVCPKKLVELESYSTLV 52
>gi|222629868|gb|EEE62000.1| hypothetical protein OsJ_16781 [Oryza sativa Japonica Group]
Length = 252
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLP 93
+A+LA+YFG+G+Q+HRSLDD RMNLEVLK CAT+L LES LP
Sbjct: 140 MATLASYFGIGKQSHRSLDDARMNLEVLKRCATLLLLESTLP 181
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 7 RFEIAFFDVET-AFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
R E+ FFDVET A GQR ++LEFGAI+VCP+ L E+ Y T++
Sbjct: 3 RPEMVFFDVETTAASADEGQR-SVLEFGAIVVCPRRLVEVDSYHTVI 48
>gi|413942181|gb|AFW74830.1| hypothetical protein ZEAMMB73_687643 [Zea mays]
Length = 722
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 12/88 (13%)
Query: 33 GAILVCPKTLEELQPYSTLLASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGL 92
G+I+V +T + L+P +LASLA YFGLG+Q HRSLDDV+MN++VLK CATVLF L
Sbjct: 394 GSIIVLSRT-DFLRP--DMLASLANYFGLGKQRHRSLDDVKMNIDVLKNCATVLF----L 446
Query: 93 PDIFTVNRWEMCS-----AASVSEGSSG 115
P F + ++ S +V E SSG
Sbjct: 447 PHFFVLISFKQESLRGVGVPTVQEMSSG 474
>gi|357130185|ref|XP_003566731.1| PREDICTED: uncharacterized protein LOC100832440 [Brachypodium
distachyon]
Length = 265
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 7/63 (11%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESGLPDIFTVNRWEMCSAASVSE 111
+A+LA YFG+G+Q HR LDD RMNLEV+K+CA VL LES LP + + +A + +
Sbjct: 150 MATLAAYFGIGKQRHRGLDDARMNLEVIKHCAAVLLLESTLPGL-------LAAAGVIHK 202
Query: 112 GSS 114
G+S
Sbjct: 203 GNS 205
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 9 EIAFFDVETAF-PNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
E+ FFDVETA P+ + ILEFGAILVCP+ L EL YSTL+
Sbjct: 9 EMVFFDVETAAAPSSCSHQWWILEFGAILVCPRRLLELSSYSTLI 53
>gi|302823961|ref|XP_002993628.1| hypothetical protein SELMODRAFT_48207 [Selaginella moellendorffii]
gi|300138556|gb|EFJ05320.1| hypothetical protein SELMODRAFT_48207 [Selaginella moellendorffii]
Length = 175
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFL 88
+A+LA+YFGLG+Q HRSL DVRMN+EVLK CATVLFL
Sbjct: 139 MATLASYFGLGKQEHRSLADVRMNIEVLKLCATVLFL 175
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI F+DVET P GQ ILEFGA++V + LEEL ++TL+
Sbjct: 1 EIVFYDVETTVPEVKGQGYEILEFGAVVVSARGLEELDSFTTLV 44
>gi|302782960|ref|XP_002973253.1| hypothetical protein SELMODRAFT_58287 [Selaginella moellendorffii]
gi|300159006|gb|EFJ25627.1| hypothetical protein SELMODRAFT_58287 [Selaginella moellendorffii]
Length = 175
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFL 88
+A+LA+YFGLG+Q HRSL DVRMN+EVLK CATVLFL
Sbjct: 139 MATLASYFGLGKQEHRSLADVRMNIEVLKLCATVLFL 175
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI F+DVET P GQ ILEFGA++V + L EL ++TL+
Sbjct: 1 EIVFYDVETTVPEVKGQGYDILEFGAVVVSARGLGELDSFTTLV 44
>gi|255576154|ref|XP_002528971.1| exonuclease, putative [Ricinus communis]
gi|223531561|gb|EEF33390.1| exonuclease, putative [Ricinus communis]
Length = 194
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
EI FFD+ET PN G R +LEFGAI+VCP+ L E++ Y+TL+
Sbjct: 14 EIVFFDLETTVPNRAGGRFWVLEFGAIIVCPRKLVEIESYTTLI 57
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/23 (78%), Positives = 21/23 (91%)
Query: 52 LASLATYFGLGQQTHRSLDDVRM 74
+A+LA YFGLGQQ HRSLDDVR+
Sbjct: 152 MATLADYFGLGQQKHRSLDDVRI 174
>gi|302769470|ref|XP_002968154.1| hypothetical protein SELMODRAFT_89701 [Selaginella moellendorffii]
gi|300163798|gb|EFJ30408.1| hypothetical protein SELMODRAFT_89701 [Selaginella moellendorffii]
Length = 168
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFL 88
L++LA YF LG+Q HRSL DVRMN++VLK CATVL L
Sbjct: 130 LSTLAAYFSLGKQEHRSLPDVRMNIKVLKRCATVLLL 166
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 8 FEIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYST 50
EI F+D+ET+ P Q ILEFGA+++ K L E+ Y+T
Sbjct: 1 MEIVFYDLETSMPEGKEQSREILEFGAVVLSAKGLVEVDSYTT 43
>gi|242052651|ref|XP_002455471.1| hypothetical protein SORBIDRAFT_03g011452 [Sorghum bicolor]
gi|241927446|gb|EES00591.1| hypothetical protein SORBIDRAFT_03g011452 [Sorghum bicolor]
Length = 142
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 9 EIAFFDVETAFPNPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
E+AFFDVET+ P Q A+LEFGA+LVCP+ L E+ Y+TL+
Sbjct: 47 EMAFFDVETSMPQRADQGYALLEFGAVLVCPRRLVEVASYATLV 90
>gi|326529009|dbj|BAK00898.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 9 EIAFFDVETAFP-NPPGQRIAILEFGAILVCPKTLEELQPYSTLL 52
E+ FFDVE A P + P ++EF AILVCP+ L E+ YSTL+
Sbjct: 8 EMVFFDVEAAQPPSCPSGECRLVEFAAILVCPRRLVEVSSYSTLI 52
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 53 ASLATYFGLGQQTHRSL---DDVRMNLEVLKYCATVLFLESGL 92
A+LA +FG+G + R L D R++L+VLK+CA VL +ES L
Sbjct: 142 AALAEHFGVGVRRARGLRCLDGARLSLDVLKHCAGVLLIESSL 184
>gi|297814576|ref|XP_002875171.1| hypothetical protein ARALYDRAFT_346774 [Arabidopsis lyrata subsp.
lyrata]
gi|297321009|gb|EFH51430.1| hypothetical protein ARALYDRAFT_346774 [Arabidopsis lyrata subsp.
lyrata]
Length = 267
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLES 90
L L +F L +QTHRSL+D +NL+V K C V+ +E
Sbjct: 202 LNELGKFFKLEEQTHRSLEDCDLNLQVFKLCLCVIGMEK 240
>gi|297814554|ref|XP_002875160.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320998|gb|EFH51419.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 52 LASLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLES 90
L L +F L +QTHRSL+D +NL+V K C V+ +E
Sbjct: 201 LNELGKFFKLEEQTHRSLEDCDLNLQVFKLCLCVIGMEK 239
>gi|436842192|ref|YP_007326570.1| CoA-binding domain protein [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432171098|emb|CCO24469.1| CoA-binding domain protein [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 698
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 165 ACEVVAKKLFEDSRSNSEWNPVVTRQSGNDPAARLRIPTVVFGDVA------QYATEMYR 218
+CE+VAK L N+ P+V R SGN L I + GD Q A E+ R
Sbjct: 313 SCELVAKALVAALGGNAPEKPIVVRMSGNSADEGLEILKEIKGDKVHRARNMQEALELLR 372
Query: 219 KEPSGDIQKLEF 230
K D Q +EF
Sbjct: 373 KLKPADAQVIEF 384
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,275,663,538
Number of Sequences: 23463169
Number of extensions: 163494082
Number of successful extensions: 319156
Number of sequences better than 100.0: 69
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 318895
Number of HSP's gapped (non-prelim): 170
length of query: 279
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 139
effective length of database: 9,074,351,707
effective search space: 1261334887273
effective search space used: 1261334887273
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)