Your job contains 1 sequence.
>023629
MENFSHQSATACPDQMNYWAANSNFPLTWLQQTPAPHVNSSASTSNSNSNSIDHHFHELP
YSWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLG
SAIEHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLI
KASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDACDHQESVSLS
RRLKQALHLALSRMSSSSSMASNCRIRSKRQRLFLPYHN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023629
(279 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 382 2.4e-35 1
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 361 4.1e-33 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 321 7.1e-29 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 316 2.4e-28 1
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 306 2.8e-27 1
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei... 303 5.7e-27 1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 277 3.3e-24 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 272 1.1e-23 1
TAIR|locus:2063203 - symbol:AT2G41130 "AT2G41130" species... 261 1.6e-22 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 258 3.4e-22 1
UNIPROTKB|Q7XZF8 - symbol:OSJNBb0033J23.9 "Helix-loop-hel... 256 5.5e-22 1
TAIR|locus:2103560 - symbol:AT3G56770 "AT3G56770" species... 254 9.0e-22 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 250 2.4e-21 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 150 5.7e-08 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 145 8.1e-08 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 145 8.9e-08 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 146 2.0e-07 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 142 2.4e-07 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 142 3.0e-07 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 141 3.6e-07 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 137 1.1e-06 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 138 1.3e-06 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 129 1.3e-06 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 136 1.3e-06 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 138 1.4e-06 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 137 1.5e-06 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 133 1.5e-06 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 137 1.8e-06 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 129 2.1e-06 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 136 2.2e-06 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 132 2.3e-06 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 129 2.6e-06 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 121 4.6e-06 1
UNIPROTKB|E9PPV4 - symbol:ARNTL "Aryl hydrocarbon recepto... 110 5.0e-06 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 130 5.4e-06 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 132 5.7e-06 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 131 6.4e-06 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 115 6.9e-06 2
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 130 7.4e-06 1
UNIPROTKB|E9PKF0 - symbol:ARNTL "Aryl hydrocarbon recepto... 108 8.3e-06 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 131 8.8e-06 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 127 1.1e-05 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 126 1.1e-05 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 129 1.3e-05 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 124 1.8e-05 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 126 2.0e-05 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 126 2.4e-05 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 116 3.5e-05 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 124 3.8e-05 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 125 3.9e-05 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 122 3.9e-05 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 121 4.2e-05 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 116 5.2e-05 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 120 5.9e-05 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 118 9.0e-05 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 118 9.4e-05 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 117 0.00012 2
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 117 0.00012 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 115 0.00012 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 120 0.00016 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 117 0.00017 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 120 0.00018 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 117 0.00024 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 116 0.00024 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 92 0.00025 2
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 115 0.00026 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 114 0.00026 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 114 0.00035 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 110 0.00037 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 107 0.00037 2
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 114 0.00044 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 110 0.00045 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 112 0.00046 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 115 0.00049 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 112 0.00050 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 112 0.00053 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 114 0.00053 1
UNIPROTKB|Q8H7N8 - symbol:OJ1217B09.8 "BHLH transcription... 112 0.00053 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 110 0.00057 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 112 0.00059 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 107 0.00060 1
UNIPROTKB|J9P9B3 - symbol:HEY2 "Uncharacterized protein" ... 101 0.00061 1
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 99 0.00061 2
UNIPROTKB|F1S6X1 - symbol:LOC100738978 "Uncharacterized p... 110 0.00061 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 110 0.00073 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 108 0.00074 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 112 0.00090 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 107 0.00091 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 113 0.00091 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 109 0.00095 1
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 93/206 (45%), Positives = 123/206 (59%)
Query: 76 DRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAME 135
++A ++S+SH AEKRRRDRIN+ L LRKL+P S+K+DKAALL + IE VK+LK KA E
Sbjct: 58 EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117
Query: 136 VSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYKE 195
+PTE DEVTV+ E E+ T + KAS C+DQPE E
Sbjct: 118 SPIFQDLPTEADEVTVQPETISDFESNTNT------------IIFKASFCCEDQPEAISE 165
Query: 196 IIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDA-CDHQESVSLSRR-LKQALHXXXXX 253
IIRVL L L T++A+I SVGGR++ +L KD+ C+ +++ S + LKQ+L
Sbjct: 166 IIRVLTKLQLETIQAEIISVGGRMRINFIL--KDSNCNETTNIAASAKALKQSLCSALNR 223
Query: 254 XXXXXXXXXN-CRIRSKRQRLFLPYH 278
+ CRIRSKRQR FL H
Sbjct: 224 ITSSSTTTSSVCRIRSKRQRWFLSSH 249
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 86/215 (40%), Positives = 128/215 (59%)
Query: 59 LPYSWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAAL 118
+P S+ + + E RA K HS+AE+RRR+RINA L TLR++IP +++MDKA L
Sbjct: 46 VPPEMSSSSGSGRSATEARAL---KIHSEAERRRRERINAHLTTLRRMIPDTKQMDKATL 102
Query: 119 LGSAIEHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDT 178
L ++ VKDLK KA E+++ +P E +EV++EC AA A A T AG+ +K
Sbjct: 103 LARVVDQVKDLKRKASEITQRTPLPPETNEVSIECFTGDAATA-ATTVAGN--HKT---L 156
Query: 179 LIKASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDACDHQESVS 238
IKAS+SCDD+P+L I GL L TVRA+++S+GGR++ + +LC ++ VS
Sbjct: 157 YIKASISCDDRPDLIAGITHAFHGLRLRTVRAEMTSLGGRVQHVFILCREEGI--AGGVS 214
Query: 239 LSRRLKQALHXXXXXXXXXXXXXXNCRIRSKRQRL 273
L + LK+A+ + +SKRQR+
Sbjct: 215 L-KSLKEAVRQALAKVASPELVYGSSHFQSKRQRI 248
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 70/165 (42%), Positives = 106/165 (64%)
Query: 71 QEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLK 130
QEV + +A A SKSHS+AE+RRR+RIN LA LR ++P + K DKA+LL I+H+K+LK
Sbjct: 122 QEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELK 181
Query: 131 LKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQP 190
+ +++ T +PTE D++TV+ SS N +G+ +I+AS C D+
Sbjct: 182 RQTSQITDTYQVPTECDDLTVD----------------SSYNDEEGNLVIRASFCCQDRT 225
Query: 191 ELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNK--DACDH 233
+L ++I LK L L T++A+I++VGGR+K+IL L + D DH
Sbjct: 226 DLMHDVINALKSLRLRTLKAEIATVGGRVKNILFLSREYDDEEDH 270
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 70/168 (41%), Positives = 110/168 (65%)
Query: 64 SNINPMT-QEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSA 122
+ + MT QE+ + +A A SKSHS+AE+RRR+RIN LA LR ++P + K DKA+LL
Sbjct: 156 AELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEV 215
Query: 123 IEHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKA 182
I+HVK+LK + +S+T +PTE DE+TV F E E G G +IKA
Sbjct: 216 IQHVKELKRETSVISETNLVPTESDELTVA---FTEEE-----ETGD------GRFVIKA 261
Query: 183 SVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDA 230
S+ C+D+ +L ++I+ LK + L T++A+I++VGGR+K++L + +++
Sbjct: 262 SLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEES 309
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 78/205 (38%), Positives = 116/205 (56%)
Query: 74 AEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKA 133
A +ATA++ HS+AE+RRR+RINA LATLR+++P +++MDKA LL S + VK LK +A
Sbjct: 60 AAAQATAMT-IHSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHLKTRA 118
Query: 134 MEV---SKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQP 190
E S TIP E +EVTV+C + E A T ++A+VSCDD+P
Sbjct: 119 TEATTPSTAATIPPEANEVTVQC--YAGGEHTAAAR-----------TYVRATVSCDDRP 165
Query: 191 ELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDACDHQESVSLSRRLKQALHXX 250
L +I + L L + AD+S +GGR + VLC ++ + +++ + +R LK+A+
Sbjct: 166 GLLADIAATFRRLRLRPLSADMSCLGGRTRHAFVLCREEE-EEEDAAAEARPLKEAVRQA 224
Query: 251 XXXXXXXXXXXXNCRIRSKRQRLFL 275
RSKRQRL +
Sbjct: 225 LAKVALPETVYGGGG-RSKRQRLMM 248
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 67/153 (43%), Positives = 101/153 (66%)
Query: 75 EDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAM 134
E++A KSHS+AE+RRR+RINA LATLR ++P ++KMDKAALL + HVK LK A
Sbjct: 72 EEKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHVKKLKSAAA 131
Query: 135 EVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYK 194
V + T+P+ DEV V+ EA A T G +G L++A++SCDD+ +L+
Sbjct: 132 RVGRRATVPSGADEVAVD-------EASA-TGGGG-----EGPLLLRATLSCDDRADLFV 178
Query: 195 EIIRVLKGLGLTTVRADISSVGGRIK-SILVLC 226
++ R L+ LGL V ++++++GGR++ + LV C
Sbjct: 179 DVKRALQPLGLEVVGSEVTTLGGRVRLAFLVSC 211
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 68/174 (39%), Positives = 107/174 (61%)
Query: 83 KSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSK--TL 140
+SHS+AE++RR RINA LATLR L+P + +MDKAALLG + HV++L+ +A + ++ +
Sbjct: 21 RSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADDATEGADV 80
Query: 141 TIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTL----IKASVSCDDQPELYKEI 196
+P E DEV VE E + E + G + GD ++A V C D+P L ++
Sbjct: 81 VVPGEGDEVGVEDE----DDDEGERDEGCYVVG-GGDRRWRRRVRAWVCCADRPGLMSDL 135
Query: 197 IRVLKGLGLTTVRADISSVGGRIKSIL---VLCNKDACDHQESVSLSRRLKQAL 247
R ++ + VRA++++VGGR +S+L V+ DA D+ +V+LS L+ AL
Sbjct: 136 GRAVRSVSARPVRAEVATVGGRTRSVLELDVVVASDAADNDRAVALSA-LRAAL 188
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 62/164 (37%), Positives = 99/164 (60%)
Query: 71 QEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLK 130
+E+ + +A A S+SHS+AE+RRR RIN LA LR L+P + K DKA+LL IEHVK+LK
Sbjct: 96 REIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELK 155
Query: 131 LKAMEVSKTLTIPT-----EVDEVTVECELFQAAEARAETEAGS-SINKV---KGDTLIK 181
+ ++ E D+ V AA+ TEA +++ +G +++
Sbjct: 156 RQTTAIAAAAAAGDYHGNDEDDDDAVVGRRSAAAQQLLPTEADELAVDAAVDAEGKLVVR 215
Query: 182 ASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVL 225
AS+ C+D+P+L +I R L L L RA+I+++GGR++S+L++
Sbjct: 216 ASLCCEDRPDLIPDIARALAALRLRARRAEITTLGGRVRSVLLI 259
>TAIR|locus:2063203 [details] [associations]
symbol:AT2G41130 "AT2G41130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004261 EMBL:AK119059 EMBL:AY074639 IPI:IPI00526770
PIR:T02106 RefSeq:NP_181646.1 UniGene:At.37024
ProteinModelPortal:O80674 SMR:O80674 EnsemblPlants:AT2G41130.1
GeneID:818712 KEGG:ath:AT2G41130 TAIR:At2g41130 eggNOG:NOG239121
HOGENOM:HOG000006083 InParanoid:O80674 OMA:RERIKSH PhylomeDB:O80674
ProtClustDB:CLSN2683662 Genevestigator:O80674 Uniprot:O80674
Length = 253
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 69/211 (32%), Positives = 113/211 (53%)
Query: 66 INPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEH 125
I+ + + +A+DRA A ++H +AE+RRR+RIN+ L LR ++ + K DKA LL ++
Sbjct: 52 ISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQR 111
Query: 126 VKDLKLKAMEVS---KTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKA 182
V++LK + +E S +TL +P+E DE++V G N G + KA
Sbjct: 112 VRELKQQTLETSDSDQTL-LPSETDEISV-------------LHFGDYSND--GHIIFKA 155
Query: 183 SVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDACDHQESVS-LSR 241
S+ C+D+ +L +++ +LK L + T+RA++ ++GGR +S+LV+ ESV L
Sbjct: 156 SLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQN 215
Query: 242 RLKQALHXXXXXXXXXXXXXXNCRIRSKRQR 272
LK L RSKR+R
Sbjct: 216 ALKSLLERSSKSLMERSSGGGGGE-RSKRRR 245
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 63/175 (36%), Positives = 100/175 (57%)
Query: 64 SNINPMT-QEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSA 122
+ + MT +E+ + +A A S+SHS+AE+RRR RIN LA LR L+P + K DKA+LL
Sbjct: 103 AELGRMTAKEIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEV 162
Query: 123 IEHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLI-K 181
IEHVK+LK + + + E V L + E +A + +G L+ +
Sbjct: 163 IEHVKELKRQTSAMMEDGAAGGEAAAAPVV--LLPTEDDELEVDAAAD----EGGRLVAR 216
Query: 182 ASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDACDHQES 236
AS+ C+D+ +L I R L L L RA+I+++GGR++S+L++ + D E+
Sbjct: 217 ASLCCEDRADLIPGIARALAALRLRARRAEIATLGGRVRSVLLIAAVEEEDPDEA 271
>UNIPROTKB|Q7XZF8 [details] [associations]
symbol:OSJNBb0033J23.9 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006083 OMA:RERIKSH EMBL:AC137507 STRING:Q7XZF8
EnsemblPlants:LOC_Os03g59670.1 Uniprot:Q7XZF8
Length = 268
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 62/161 (38%), Positives = 95/161 (59%)
Query: 74 AEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKA 133
A+DRA A S++H +AEKRRR+RI + L LR ++ K+DKA+LL A+E V+DLK +
Sbjct: 60 AQDRALAASRNHREAEKRRRERIKSHLDRLRAVLACDPKIDKASLLAKAVERVRDLKQRM 119
Query: 134 M---EVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLI-KASVSCDDQ 189
E + PTE DE+ V G + G + +ASV CDD+
Sbjct: 120 AGIGEAAPAHLFPTEHDEIVVLAS------------GGGGVGGAGGAAAVFEASVCCDDR 167
Query: 190 PELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDA 230
+L E+I L+ L L T+RA+++++GGR++++LVL +DA
Sbjct: 168 CDLLPELIETLRALRLRTLRAEMATLGGRVRNVLVLA-RDA 207
>TAIR|locus:2103560 [details] [associations]
symbol:AT3G56770 "AT3G56770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL390921 HOGENOM:HOG000006083 ProtClustDB:CLSN2683662
IPI:IPI00540753 PIR:T51265 RefSeq:NP_191236.1 UniGene:At.53958
ProteinModelPortal:Q9LET0 SMR:Q9LET0 EnsemblPlants:AT3G56770.1
GeneID:824844 KEGG:ath:AT3G56770 TAIR:At3g56770 eggNOG:NOG237033
InParanoid:Q9LET0 OMA:RRIIFKV PhylomeDB:Q9LET0
Genevestigator:Q9LET0 Uniprot:Q9LET0
Length = 230
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 64/185 (34%), Positives = 106/185 (57%)
Query: 64 SNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAI 123
S+ +P V ED+A A ++H +AE++RR RIN+ L LRKL+ + K DK+ LL +
Sbjct: 29 SSSDPFAT-VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVV 87
Query: 124 EHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKAS 183
+ VK+LK + +E++ TIP+E DE++V E + ++ + K S
Sbjct: 88 QRVKELKQQTLEITDE-TIPSETDEISV---------LNIEDCSRGDDRRI----IFKVS 133
Query: 184 VSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDACDHQESVS-LSRR 242
C+D+PEL K+++ LK L + T+ AD+++VGGR +++LV+ +SV+ L
Sbjct: 134 FCCEDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNA 193
Query: 243 LKQAL 247
LK L
Sbjct: 194 LKSLL 198
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 62/153 (40%), Positives = 87/153 (56%)
Query: 74 AEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKA 133
A R T +SHS+AE++RR+RINA L TLR L+P + +MDKAALLG + +V+ KL++
Sbjct: 21 AAPRWTRARRSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVR--KLRS 78
Query: 134 MEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGS-SINKVKGDTLIKASVSCDDQPEL 192
+P E DEV VE E E E S + + +KASV C D+P L
Sbjct: 79 EAAGSAAVVPGEGDEVVVE-------EEEVEVEGCSCDAGERQAARRVKASVCCADRPGL 131
Query: 193 YKEIIRVLKGLGLTTVRADISSVGGRIKSILVL 225
E+ + + VRA+I++VGGR +S L L
Sbjct: 132 MSELGDAERSVSARAVRAEIATVGGRTRSDLEL 164
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 150 (57.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 34/100 (34%), Positives = 62/100 (62%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV-SKTLTI 142
+H +AE++RR+++N + LR ++P KMDKA+LLG AI ++ +LK K ++ S+ L I
Sbjct: 452 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQI 511
Query: 143 PTEVDEVTVECELFQAAEARAETEAG-SSINKVKGDTLIK 181
+++EV +E +A+ + + + SSI V + +K
Sbjct: 512 KNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVK 551
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 145 (56.1 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 47/165 (28%), Positives = 79/165 (47%)
Query: 88 AEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL-----KLKAMEVSKTLTI 142
AE+RRR R+N +L+ LR ++PK KMD+ ++LG AI+++K+L KL+ E +
Sbjct: 182 AERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQELGNSN 241
Query: 143 PTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYKEIIRVLKG 202
+ ++ + + A E I++ DT + + C +P L + L+
Sbjct: 242 NSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDT--RVDICCSPKPGLLLSTVNTLET 299
Query: 203 LGLTTVRADISSVGGRIKSILVLCNKDACDHQESVSLSRRLKQAL 247
LGL + IS S+ C++ A Q S +KQAL
Sbjct: 300 LGLEIEQCVISCFSDF--SLQASCSEGA--EQRDFITSEDIKQAL 340
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 145 (56.1 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 28/70 (40%), Positives = 47/70 (67%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV 136
RA A+ H+++E+RRRDRIN ++ TL+KL+P + K DK ++L IEH+K L+ + +
Sbjct: 166 RAAAI---HNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM 222
Query: 137 SKTLTIPTEV 146
S +P ++
Sbjct: 223 SLRANLPQQM 232
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 39/139 (28%), Positives = 72/139 (51%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KLKAMEVSKTLT 141
+H +AE++RR+++N + LR ++P KMDKA+LLG AI ++ +L KL A+E K T
Sbjct: 524 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETDKE-T 582
Query: 142 IPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKA-----SVSCDDQPELYKEI 196
+ ++++ + E + A + + G+ + V+ + I V C + +
Sbjct: 583 LQSQMESLKKERDARPPAPSGGGGDGGARCHAVEIEAKILGLEAMIRVQCHKRNHPAARL 642
Query: 197 IRVLKGLGLTTVRADISSV 215
+ L+ L L A +S V
Sbjct: 643 MTALRELDLDVYHASVSVV 661
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/68 (41%), Positives = 49/68 (72%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV 136
RA A+ H+Q+E++RRD+IN ++ TL+KL+P S K DKA++L IE++K L+ + +
Sbjct: 213 RAAAI---HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
Query: 137 SKTLTIPT 144
S+ + +P+
Sbjct: 270 SR-MNMPS 276
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 44/150 (29%), Positives = 77/150 (51%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KLKAM 134
R A ++ H AE++RR+++ Q L ++P +K DK +LLGS I++VK L K+KA+
Sbjct: 280 RPPANAQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKAL 339
Query: 135 EVSKTLTI-PTEVDE----VTVECELFQAAEARAETEAGSSINK-------VKGDTLIKA 182
E T PT E +TV+ + A + T+ GSS + + G+T++
Sbjct: 340 EEGSRRTAEPTTAFESKCRITVDDD--DGGSASSGTDDGSSSSSSPTVEASIHGNTVL-L 396
Query: 183 SVSCDDQPELYKEIIRVLKGLGLTTVRADI 212
+ C ++ L I+ L+ GL+ + +
Sbjct: 397 KICCKERRGLLVMILSELEKQGLSIINTSV 426
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 141 (54.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 88 AEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KLKAMEVSKTLTIPTE 145
AE+RRR R+N +L+ LR ++PK KMD+ ++LG I++VK+L ++K +E +T P E
Sbjct: 186 AERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIGVT-PEE 244
Query: 146 VDEVTV--ECELFQAAEARAETEAGSSI-NKVKGDTLIKASVSCDDQPELYKEIIRVLKG 202
+D + + E + N+ G+T I+ + C P + + L+
Sbjct: 245 LDLLNTMKDSSSGNNNEMLVRNSTKFDVENRGSGNTRIE--ICCPANPGVLLSTVSALEV 302
Query: 203 LGLTTVRADIS 213
LGL + +S
Sbjct: 303 LGLEIEQCVVS 313
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 52 IDHHFHELPYSWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSE 111
I+H + S + N Q +R + ++ H+ +E+RRRDRIN ++ L++LIP
Sbjct: 229 INHTDESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCS 288
Query: 112 KMDKAALLGSAIEHVKDLKLK 132
K DKA++L AI+++K L+L+
Sbjct: 289 KTDKASILDEAIDYLKSLQLQ 309
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KLKAMEVSKTLT 141
+H +AE++RR+++N + LR ++P KMDKA+LLG AI ++K+L K+K ME + T
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGT 454
Query: 142 IPT--EVDEVTVE 152
+ E + +TVE
Sbjct: 455 DKSLSESNTITVE 467
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 129 (50.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/53 (45%), Positives = 39/53 (73%)
Query: 85 HSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVS 137
H+ +EK+RR +IN ++ L+KLIP S K DKA++L AIE++K L+L+ ++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA 150
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 74 AEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLK 132
A R T ++ H+ +E+RRRDRIN +L L++L+P K DKA++L AIE++K L+++
Sbjct: 222 AAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQ 280
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV-SKTLTI 142
+H +AE++RR+++N + +LR ++P KMDKA+LLG AI ++ +LK K + S I
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEI 474
Query: 143 PTEVDEVTVECELFQAAEARA-------ETEAGSSIN-----KVKG-DTLIKASVSCDDQ 189
++D ++ E + +RA + SSI K+ G D +I+ D
Sbjct: 475 QKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKDH 534
Query: 190 PELYKEIIRVLKGLGLTTVRADISSVGG-RIKSILVLCNKDACDHQE-SVSLSRRL 243
P + LK L L A +S V I+ V +H + V+L ++
Sbjct: 535 PGA--RFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQFFNHDQLKVALMTKV 588
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 68 PMTQEVAED-RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHV 126
P + +D R SH AE+RRR+++N + TLR ++P KMDK ++LG I +V
Sbjct: 346 PFLHDNTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYV 405
Query: 127 KDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSC 186
L+ + E+ T + + T C+ + +E E E SI ++ D L++ + C
Sbjct: 406 NHLRKRVHELENTHH--EQQHKRTRTCKR-KTSE---EVEV--SI--IENDVLLE--MRC 453
Query: 187 DDQPELYKEIIRVLKGLGLTTVRADIS 213
+ + L +I++VL LG+ T S
Sbjct: 454 EYRDGLLLDILQVLHELGIETTAVHTS 480
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 133 (51.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV 136
+ + ++ H+ +EKRRR RIN ++ L+ LIP S K DKA++L AIE++K L+L+ +
Sbjct: 29 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 88
Query: 137 S 137
S
Sbjct: 89 S 89
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/67 (41%), Positives = 45/67 (67%)
Query: 74 AEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KL 131
A RA A++ H +AE++RR+++N + LR ++P KMDKA+LLG A+ ++ +L KL
Sbjct: 425 ANGRAEALN--HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKL 482
Query: 132 KAMEVSK 138
K ME +
Sbjct: 483 KVMEAER 489
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 129 (50.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 71 QEVAEDRATAVSKSHS----QAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHV 126
Q+ + A A+ K +AE+RRR R+N + LR ++PK KM K A L AIEH+
Sbjct: 48 QQQQQAAAAAMGKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHI 107
Query: 127 KDLKLKAMEVSKTL 140
K+L+ + +E+ + L
Sbjct: 108 KNLQNEVLELQRQL 121
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKA--M 134
+ + ++ H+ +E+RRRDRIN ++ L++LIP K+DKA++L AIE++K L+L+ M
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 368
Query: 135 EVSKTLTIP 143
+ L IP
Sbjct: 369 SMGTGLCIP 377
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 132 (51.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 32/104 (30%), Positives = 59/104 (56%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV 136
+ + ++ H+ +EKRRR +IN ++ L+ LIP S K DKA++L AIE++K L+L+ +
Sbjct: 100 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
Query: 137 SKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLI 180
S + ++ E QA++ A G+++ V T++
Sbjct: 160 SMRNGVYLNPSYLSGALEPAQASQMFAAL-GGNNVTVVHPGTVM 202
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 129 (50.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 88 AEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSKTLTIPTEVD 147
AE+RRR ++N +L LR L+P+ K+D+A++LG AI +VK+L+ +A E+ L +E +
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETE 377
Query: 148 E 148
+
Sbjct: 378 D 378
Score = 46 (21.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 15/72 (20%), Positives = 30/72 (41%)
Query: 140 LTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYKEIIRV 199
L+ + V V + +L + + E E + ++ G V C+ +P + ++
Sbjct: 401 LSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDGREFF-VKVICEYKPGGFTRLMEA 459
Query: 200 LKGLGLTTVRAD 211
L LGL A+
Sbjct: 460 LDSLGLEVTNAN 471
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 121 (47.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 23/56 (41%), Positives = 40/56 (71%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLK 132
R + ++ H+ +E+RRRDRIN +L L++L+P K DK ++L AI+++K L+L+
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQ 65
>UNIPROTKB|E9PPV4 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003700 GO:GO:0005667
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884 EMBL:AC022878
HGNC:HGNC:701 IPI:IPI00978797 ProteinModelPortal:E9PPV4 SMR:E9PPV4
Ensembl:ENST00000530357 ArrayExpress:E9PPV4 Bgee:E9PPV4
Uniprot:E9PPV4
Length = 141
Score = 110 (43.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 27/90 (30%), Positives = 50/90 (55%)
Query: 75 EDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPK----SEKMDKAALLGSAIEHVKDLK 130
+ R ++HSQ EKRRRD++N+ + L L+P S K+DK +L A++H+K L+
Sbjct: 24 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 83
Query: 131 LKAMEVSKTLTIPTEVDEVTVECELFQAAE 160
++ PT + + ++ + +AA+
Sbjct: 84 GATNPYTEANYKPTFLSDDELKHLILRAAD 113
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 130 (50.8 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 58 ELPYSWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAA 117
E P S S P ++ ++ R A ++ H+ +EKRRR RIN ++ L+ LIP S K DKA+
Sbjct: 179 EAPSSKSG--PSSRSSSK-RCRA-AEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKAS 234
Query: 118 LLGSAIEHVKDLKLK 132
+L AIE++K L+L+
Sbjct: 235 MLDEAIEYLKQLQLQ 249
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 25/53 (47%), Positives = 40/53 (75%)
Query: 85 HSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVS 137
H+ +E+RRRDRIN ++ L++LIP K+DKA++L AIE++K L+L+ +S
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMS 400
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 131 (51.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 70 TQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL 129
T RA V H+ +E++RRDRIN ++ L++LIP+ K DKA++L AIE++K L
Sbjct: 277 TTSTKRSRAAEV---HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSL 333
Query: 130 KLKAMEVS 137
+L+ +S
Sbjct: 334 QLQIQMMS 341
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 115 (45.5 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 66 INPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEH 125
+N + VA A A SK+ + E+ RR R+N +L LR ++PK KMDKA+++ AI H
Sbjct: 80 VNLCSTAVASAAAAASSKNIAM-ERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAH 138
Query: 126 VKDLKLKAMEVSKTLTI 142
++ L+ + ++ +++
Sbjct: 139 IEKLQEEERQLLDEISV 155
Score = 49 (22.3 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 171 INKVKGDTLIKASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRI 219
++KV G+ + S+ C ++ ++ L L V A +++V G I
Sbjct: 236 VSKV-GEKTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSASVAAVDGTI 283
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 130 (50.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 67 NPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHV 126
N +Q R + ++ H+ +E+RRRDRIN ++ L++LIP + DKA++L AI+++
Sbjct: 243 NKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYL 302
Query: 127 KDLKLK 132
K L+++
Sbjct: 303 KSLQMQ 308
>UNIPROTKB|E9PKF0 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000060 "protein import
into nucleus, translocation" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0005667 GO:GO:0000060 GO:GO:0000982 GO:GO:0001190
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042176 EMBL:AC016884
EMBL:AC022878 IPI:IPI00413132 HGNC:HGNC:701
ProteinModelPortal:E9PKF0 SMR:E9PKF0 Ensembl:ENST00000529388
ArrayExpress:E9PKF0 Bgee:E9PKF0 Uniprot:E9PKF0
Length = 135
Score = 108 (43.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 75 EDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPK----SEKMDKAALLGSAIEHVKDLK 130
+ R ++HSQ EKRRRD++N+ + L L+P S K+DK +L A++H+K L+
Sbjct: 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 131 (51.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 31/102 (30%), Positives = 58/102 (56%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV-SKTLTI 142
+H +AE++RR+++N + +LR ++P KMDKA+LLG AI ++ +LK K + S +
Sbjct: 416 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEEL 475
Query: 143 PTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASV 184
++D + E A A++ + +N+ + LI+ V
Sbjct: 476 QKQIDVMNKE-----AGNAKSSVKDRKCLNQ-ESSVLIEMEV 511
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/161 (28%), Positives = 83/161 (51%)
Query: 74 AEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLK--L 131
A R + ++ H AE++RR++++ + L K++P +KMDKA++LG AI++VK L+ +
Sbjct: 171 AASRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQV 230
Query: 132 KAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINK-------VKGDTLIKASV 184
K +E + P E L + ++ A+ + GSS ++ G I+A V
Sbjct: 231 KGLE-EEARRRPVEA------AVLVKKSQLSADDDDGSSCDENFDGGEATAGLPEIEARV 283
Query: 185 SCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVL 225
S ++ L K KG L T +++ ++G I + VL
Sbjct: 284 S--ERTVLVKIHCENRKG-ALITALSEVETIGLTIMNTNVL 321
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/152 (25%), Positives = 74/152 (48%)
Query: 62 SWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGS 121
S+ +I ++ + + + AE+RRR R+N +L+ LR ++PK KMD+ ++LG
Sbjct: 129 SFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGD 188
Query: 122 AIEHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIK 181
AI+++K+L K ++K E+ + L E+ +++ + +T I
Sbjct: 189 AIDYMKELLDK---INKLQEDEQELGSNSHLSTLI-TNESMVRNSLKFEVDQREVNTHI- 243
Query: 182 ASVSCDDQPELYKEIIRVLKGLGLTTVRADIS 213
+ C +P L + L+ LGL + IS
Sbjct: 244 -DICCPTKPGLVVSTVSTLETLGLEIEQCVIS 274
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 64 SNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAI 123
SN N + + + + AE+RRR ++N +L LR ++PK KMD+A++LG AI
Sbjct: 316 SNANSTVTGDGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI 375
Query: 124 EHVKDLKLKAMEVSKTL 140
E++K+L K ++ L
Sbjct: 376 EYLKELLQKINDLQNEL 392
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/168 (26%), Positives = 83/168 (49%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV 136
R+ + ++ H AE++RR+++ + L LIP +KMDKA++LG AI+H+K L+ E
Sbjct: 119 RSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEY 178
Query: 137 S-----KTLTIPTEVDEVTVECELFQAAEARAETEAG---SSIN------KVKG-DTLIK 181
KT+ V + ++ + + + ++ SS N +V G D LIK
Sbjct: 179 EEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIK 238
Query: 182 ASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKD 229
+ C+ Q +I+ ++ LGL+ +++ G I ++ K+
Sbjct: 239 --ILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPTF-DISIIAQKN 283
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/69 (37%), Positives = 46/69 (66%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVS---KTL 140
SH +AEK+RR+++N + LR ++PK +MDKA+LL A+ +++ LK K ++ K +
Sbjct: 249 SHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKM 308
Query: 141 TIPTEVDEV 149
+ TE D++
Sbjct: 309 KM-TETDKL 316
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KLKAMEVSKTLT 141
+H +AE++RR+++N + LR ++P KMDKA+LL AI ++ D+ K++ E K +
Sbjct: 320 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIM 379
Query: 142 IPTEVDEVT 150
E +++T
Sbjct: 380 KRRESNQIT 388
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 116 (45.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 91 RRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSK 138
+RRDRIN ++ TL+KL+P S K DKA++L I+++K L+ + +S+
Sbjct: 12 KRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVMSR 59
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 38/169 (22%), Positives = 80/169 (47%)
Query: 62 SW-SNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLG 120
+W +N + + D+ +++ K+H +E+RRR+++ L+ ++P K+DKA++L
Sbjct: 222 AWMNNADGSAATMTTDQGSSI-KNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILA 280
Query: 121 SAIEHVKDLKLKAMEV-SKTLTIPTEVDEVTVEC------ELFQAAEARAETEAGSSINK 173
I ++K+L+ + E+ S + P ++ C ++ A A+ + A +
Sbjct: 281 ETIAYLKELEKRVEELESSSQPSPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDG 340
Query: 174 VKGDTLIKASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSI 222
+ + +V+ D EL E+ K L +T V I V + S+
Sbjct: 341 ERRHCVSNVNVTIMDNKELLLELQCQWKELLMTRVFDAIKGVSLDVLSV 389
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 125 (49.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/53 (43%), Positives = 39/53 (73%)
Query: 85 HSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVS 137
H+ +E+RRR+RIN ++ TL++L+P+ K DK ++L IE+VK L+L+ +S
Sbjct: 362 HNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMS 414
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 122 (48.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 83 KSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KLKAME 135
+ H AE+RRR++IN + L +IP +KMDKA +LG A+++VK+L K+K +E
Sbjct: 166 QDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLE 220
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 121 (47.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 58 ELPYSWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSE-KMDKA 116
E P S + ++ D+A+A+ HS E+RRR +IN + LR+LIP SE K D A
Sbjct: 23 EGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTA 82
Query: 117 ALLGSAIEHVKDLKLKAME 135
+ L I++V+ L+ K +
Sbjct: 83 SFLLEVIDYVQYLQEKVQK 101
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 116 (45.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 40/192 (20%), Positives = 85/192 (44%)
Query: 56 FHELPYSWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDK 115
F E P S +T+E ED + +AE+RRR++++ +L LR +P M K
Sbjct: 7 FQE-PVRMSRRKQVTKEKEEDEN--FKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTK 63
Query: 116 AALLGSAIEHVKDLKLKAMEVSKTL----TIPTEVDE------VTVECELFQAAEARAET 165
A+++ AI ++ +L+ + +T P E+DE + E E E +
Sbjct: 64 ASIVEDAITYIGELQNNVKNLLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKL 123
Query: 166 EAGSSINKVK-GDTLIKASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILV 224
++ K G+ + + + ++ + + V++ LG + +++ G I
Sbjct: 124 GIEENVQLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISAS 183
Query: 225 LCNKDACDHQES 236
+ ++ CD +++
Sbjct: 184 VQTQELCDVEQT 195
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 120 (47.3 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 35/154 (22%), Positives = 77/154 (50%)
Query: 58 ELPYSWSNINPMTQEVAEDRATAVS----------KSHSQAEKRRRDRINAQLATLRKLI 107
E ++SN M Q+V R V+ K H AE++RR ++N +L L L+
Sbjct: 96 ETSLNFSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALL 155
Query: 108 PKSEKMDKAALLGSAIEHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEA 167
P +K DKA +L AI+H+K L+ + ++ + + ++D+ + L + ++ + ++
Sbjct: 156 PGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTKKMDQSII---LVKRSQVYLDDDS 212
Query: 168 GSSINKVKGDTLIKASVSCDDQPELYKEIIRVLK 201
S + + + +S D+ ++K+ + +++
Sbjct: 213 SSYSSTCSAASPLSSS---SDEVSIFKQTMPMIE 243
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 118 (46.6 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 85 HSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KLKAME 135
H AE++RR++IN + L +IPK +KMDKA +L A ++++L KLKA+E
Sbjct: 131 HVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALE 183
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 118 (46.6 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 21/56 (37%), Positives = 40/56 (71%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLK 132
+ + ++ H+ AE+RRR++IN ++ TL++LIP+ K K ++L IE+VK L+++
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQ 202
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 117 (46.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/42 (50%), Positives = 34/42 (80%)
Query: 88 AEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL 129
AE+RRR ++N +L LR ++PK KMD+A++LG AI+++K+L
Sbjct: 311 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 352
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 186 CDDQPELYKEIIRVLKGLGLTTVRADISSVGG 217
C +P L ++ L LGL +A IS G
Sbjct: 427 CGRRPGLLLATMKALDNLGLDVQQAVISCFNG 458
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 68 PMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVK 127
P T+ R + HS AE+ RR+RI ++ +L++L+P K DKA++L I++VK
Sbjct: 124 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVK 183
Query: 128 DLKLKAMEVS 137
L+L+ +S
Sbjct: 184 FLQLQVKVLS 193
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 56 FHELPYSWSNINPMTQEVAEDRATAVSKS-HSQAEKRRRDRINAQLATLRKLIPKSEKMD 114
FH NI+P T + R +S S A + RR+RI+ ++ L++L+P KMD
Sbjct: 132 FHIAALQPVNIDPETVRPPKRRNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMD 191
Query: 115 KAALLGSAIEHVKDLKLKAMEVSK 138
A++L AI +VK LK + + +
Sbjct: 192 TASMLDEAIHYVKFLKTQVQSLER 215
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 20/53 (37%), Positives = 38/53 (71%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV 136
+H+ +EK+RR+++N + TLR +IP K+DK ++L IE+++DL+ + E+
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL 457
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 21/65 (32%), Positives = 43/65 (66%)
Query: 83 KSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KLKAMEVSKTL 140
K+H +E+RRR+++N L+ L+P +K+DKA++L I ++K+L +++ +E K +
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKV 246
Query: 141 TIPTE 145
+ P +
Sbjct: 247 SRPAK 251
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 25/90 (27%), Positives = 49/90 (54%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSKTLTIP 143
+H+ EK+RR+++N + TLRK+IP K+DK ++L IE++++L+ + E+
Sbjct: 441 NHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCREST 500
Query: 144 TEVDEVTVECELFQAAEARAETEAGSSINK 173
T+ + + +A T A + N+
Sbjct: 501 DTETRGTMTMKRKKPCDAGERTSANCANNE 530
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLK 130
+ + ++ H+ AE+RRR++IN ++ TL++LIP+ K K + L AIE+VK L+
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQ 305
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 80 AVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL--KLKAMEV 136
A SK+ AE+RRR R+N +L+ LR ++P+ KMD+ ++LG I +VK+L ++K ++V
Sbjct: 193 APSKN-LMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQV 250
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 92 (37.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/81 (25%), Positives = 47/81 (58%)
Query: 78 ATAVSKSHSQ-AEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV 136
AT+ + S + +E+ RR ++N +L LR ++P K+DKA+++ +I+++++L +
Sbjct: 47 ATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQEL------I 100
Query: 137 SKTLTIPTEVDEVTVECELFQ 157
+ T+ E+ E+ L +
Sbjct: 101 DQEKTLEAEIRELESRSTLLE 121
Score = 59 (25.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 176 GDTLIKASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVL 225
G+ + ++C + E ++ +VL+ L L + + SS R+ + L L
Sbjct: 175 GEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFL 224
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 58 ELPYSWSNINPMTQEVAEDRATAVSKS-HSQAEKRRRDRINAQLATLRKLIPKSE-KMDK 115
+ PY + + + D+ + +S HS E+RRR +IN +L LR+L+P ++ K DK
Sbjct: 122 QTPYEATRAEGRSSASSADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDK 181
Query: 116 AALLGSAIEHVKDLKLKAME 135
A+ L IE+++ L+ K +
Sbjct: 182 ASFLSEVIEYIRFLQEKVQK 201
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 114 (45.2 bits), Expect = 0.00026, P = 0.00026
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 59 LPYSWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAAL 118
+P+ S I P V R A HS AE+ RR+RI ++ +L++L+P K D+AA+
Sbjct: 133 MPHQQSTIRP---RVRARRGQATDP-HSIAERLRRERIAERIRSLQELVPTVNKTDRAAM 188
Query: 119 LGSAIEHVKDLKLKAMEVSKT-LTIPTEVDEVTVECELFQAAEARAETEA 167
+ +++VK L+L+ +S + L V + E L + E ET+A
Sbjct: 189 IDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVED--ETQA 236
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 114 (45.2 bits), Expect = 0.00035, P = 0.00035
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 78 ATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVS 137
A ++ H AE++RR++IN + L +IP +KMDKA +L A+ +VK+++ K E+
Sbjct: 186 AAPYAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE 245
Query: 138 K 138
+
Sbjct: 246 Q 246
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 110 (43.8 bits), Expect = 0.00037, P = 0.00037
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 65 NINPMTQEVAEDRATAVSKS-HSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAI 123
+I+P T + + R +S S A + RR+RI+ ++ L++L+P KMD A++L AI
Sbjct: 109 DIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI 168
Query: 124 EHVKDLK--LKAMEVSKTLTIPTEVDEVT 150
+VK LK ++ + + T P D+ +
Sbjct: 169 RYVKFLKRQIRLLNNNTGYTPPPPQDQAS 197
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 107 (42.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKS--EKMDKAALLGSAIEHVKDLK--LKAMEVSKT 139
+H E+ RR ++N LA LR L+P+ ++ D+A+++G AIE VK+L+ L+++E K
Sbjct: 91 THIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSLEAQKR 150
Query: 140 LTIP 143
+P
Sbjct: 151 TLLP 154
Score = 45 (20.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 178 TLIKASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRIKSILVLCNKDA 230
T++ +V+ D LY ++V +G LTTV DI++ + +L + + +A
Sbjct: 296 TVLHLNVTTLDSLVLYTLSVKVEEGCSLTTVD-DIAAA---VHHVLCIVDAEA 344
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 114 (45.2 bits), Expect = 0.00044, P = 0.00044
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 52 IDHHFHELPYSWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSE 111
++ + P + +N P T+ R + HS AE+ RR++I+ ++ L+ L+P S
Sbjct: 221 VEPQANSAPGNSANAKPRTRA----RRGQATDPHSIAERLRREKISERMKNLQVLVPNSN 276
Query: 112 KMDKAALLGSAIEHVKDLKLKAMEVS 137
K DKA++L I++VK L+L+ +S
Sbjct: 277 KADKASMLDEIIDYVKFLQLQVKVLS 302
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 110 (43.8 bits), Expect = 0.00045, P = 0.00045
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 65 NINPMTQEVAEDRATAVSKS-HSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAI 123
+I+P + + R +SK S A + RR+RI+ ++ L++L+P KMD A++L AI
Sbjct: 112 HIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI 171
Query: 124 EHVKDLK--LKAMEVSKTLT 141
+VK LK ++++E +T
Sbjct: 172 HYVKFLKKQVQSLEEQAVVT 191
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 26/71 (36%), Positives = 46/71 (64%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKS--EKMDKAALLGSAIEHVKDLK--LKAMEVSKT 139
+H E+ RR ++N LA LR L+P S ++ D+A+++G AI +VK+L+ L++ME +T
Sbjct: 116 THIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRT 175
Query: 140 LTIPTEVDEVT 150
T + D+ +
Sbjct: 176 RTHDPKGDKTS 186
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 30/103 (29%), Positives = 54/103 (52%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSKTLTIP 143
+H +AE+ RR+++N + LR ++P KMDK +LL A+ ++ +LK KA V
Sbjct: 343 NHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENV------- 395
Query: 144 TEVDEVTVECELFQAAEARAETEAGSSINKV--KGDTLIKASV 184
E+++ +E + + E + A S+ K K ++K V
Sbjct: 396 -ELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEV 437
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 112 (44.5 bits), Expect = 0.00050, P = 0.00050
Identities = 35/131 (26%), Positives = 68/131 (51%)
Query: 77 RATAVSKSHSQ-AEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAME 135
R T +S + +E+RRR R+ +L LR L+P KMDKA+++G A+ +V++L+ +A +
Sbjct: 123 RKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKK 182
Query: 136 VSKTLT-IPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYK 194
+ + + ++ E A +A+ +T+ IN +I+ V ++ Y
Sbjct: 183 LKSDIAGLEASLNSTGGYQE--HAPDAQ-KTQPFRGINPPASKKIIQMDVIQVEEKGFYV 239
Query: 195 EIIRVLKGLGL 205
++ KG G+
Sbjct: 240 RLV-CNKGEGV 249
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 112 (44.5 bits), Expect = 0.00053, P = 0.00053
Identities = 20/57 (35%), Positives = 39/57 (68%)
Query: 82 SKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSK 138
++ H AE++RR+++ + L L+P +KMDKA++LG A++H+K L+ + E+ +
Sbjct: 150 AQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEE 206
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 114 (45.2 bits), Expect = 0.00053, P = 0.00053
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 62 SW-SNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLG 120
+W SNI+ + KSH +E+RRR+++N L+ L+P K+DKA++L
Sbjct: 355 AWMSNIDDRGSVAITTTPGSNIKSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILA 414
Query: 121 SAIEHVKDLKLKAMEVSKTLTIPT 144
I ++K L+ + E+ + P+
Sbjct: 415 ETITYLKVLEKRVKELESSSREPS 438
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 112 (44.5 bits), Expect = 0.00053, P = 0.00053
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPKS--EKMDKAALLGSAIEHVKDLK--LKAMEVSKT 139
+H E+ RR ++N LA LR L+P S ++ D+A+++G AI +VK+L+ L+++EV K+
Sbjct: 112 THIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQLLQSLEVQKS 171
Query: 140 L 140
L
Sbjct: 172 L 172
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 110 (43.8 bits), Expect = 0.00057, P = 0.00057
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 77 RATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEV 136
R +++H EKRRR RIN + L++L+P +K +++ L I ++K L+ + +
Sbjct: 149 RNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSSTLDRTIHYMKSLQQQLQAM 208
Query: 137 SKTLTIPTEVDEVTVECELFQAAEARAETEAG 168
T+ P V V F A A ++ G
Sbjct: 209 YPTMVRPAAVYPVVQPPPAFAAGGPPAASQGG 240
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 112 (44.5 bits), Expect = 0.00059, P = 0.00059
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 68 PMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVK 127
P ++ R + HS AE+ RR+RI ++ L++L+P K DKA++L I++VK
Sbjct: 132 PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVK 191
Query: 128 DLKL--KAMEVSK---TLTIPTEVDEVTVECELFQAAEARAETEAGSSINKV 174
L+L K + +S+ ++ +++ E +A AG+S + V
Sbjct: 192 FLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSV 243
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 107 (42.7 bits), Expect = 0.00060, P = 0.00060
Identities = 45/150 (30%), Positives = 68/150 (45%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIP--KSEKMDKAALLGSAIEHVKDLK-----LKAMEV 136
SH E+ RR ++N L +LR L P ++ D+A+++G IE +K+L+ L++ +
Sbjct: 2 SHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKR 61
Query: 137 SKTLTIPT-EVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYKE 195
KTL P+ D T+E AA R S I V + K +C + P E
Sbjct: 62 RKTLNRPSFPYDHQTIEPSSLGAATTRVPF---SRIENVMTTSTFKEVGACCNSPHANVE 118
Query: 196 IIRVLKGLGLTTVRADISSVGGRIKSILVL 225
+ L V I VG +K I VL
Sbjct: 119 AKISGSNVVLRVVSRRI--VGQLVKIISVL 146
>UNIPROTKB|J9P9B3 [details] [associations]
symbol:HEY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104130
EMBL:AAEX03000421 Ensembl:ENSCAFT00000044703 OMA:FRECTAE
Uniprot:J9P9B3
Length = 149
Score = 101 (40.6 bits), Expect = 0.00061, P = 0.00061
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 56 FHELPYSWSNINPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPK------ 109
FH S S++ + A K EKRRRDRIN L+ LR+L+P
Sbjct: 1 FHR--QSTSSVIRSNSPTTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQG 58
Query: 110 SEKMDKAALLGSAIEHVKDLK 130
S K++KA +L ++H+K L+
Sbjct: 59 SAKLEKAEILQMTVDHLKMLQ 79
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 99 (39.9 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 84 SHSQAEKRRRDRINAQLATLRKLIPK--SEKMDKAALLGSAIEHVKDLK--LKAMEVS-K 138
+H E+ RR ++N LA LR L+P +++ D+A+++G AI ++K+L+ L++ME K
Sbjct: 126 THIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVK 185
Query: 139 TLTIPT 144
T T T
Sbjct: 186 TATEDT 191
Score = 50 (22.7 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 169 SSINKVKGDTLIKASVSCDDQPELYKEIIRVLKGLGLTTVRADISSVGGRI 219
SSI ++ TL+ +V+ D LY ++V +G L TV DI++ +I
Sbjct: 261 SSIQSLRL-TLLHLNVTTRDDSVLYSISVKVEEGSQLNTVE-DIAAAVNQI 309
>UNIPROTKB|F1S6X1 [details] [associations]
symbol:LOC100738978 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU914667
Ensembl:ENSSSCT00000014635 OMA:KKXILNG Uniprot:F1S6X1
Length = 273
Score = 110 (43.8 bits), Expect = 0.00061, P = 0.00061
Identities = 27/90 (30%), Positives = 50/90 (55%)
Query: 75 EDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPK----SEKMDKAALLGSAIEHVKDLK 130
+ R ++HSQ EKRRRD++N+ + L L+P S K+DK +L A++H+K L+
Sbjct: 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Query: 131 LKAMEVSKTLTIPTEVDEVTVECELFQAAE 160
++ PT + + ++ + +AA+
Sbjct: 127 GATNPYTEANYKPTFLSDDELKHLILRAAD 156
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 110 (43.8 bits), Expect = 0.00073, P = 0.00073
Identities = 22/53 (41%), Positives = 38/53 (71%)
Query: 85 HSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVS 137
HS AE+ RR+RI ++ +L++L+P + K DKA++L IE+V+ L+L+ +S
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLS 162
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 108 (43.1 bits), Expect = 0.00074, P = 0.00074
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 56 FHELPYSWSNINPMTQEVAEDRATAVSKS-HSQAEKRRRDRINAQLATLRKLIPKSEKMD 114
FH I+P + R +SK S A + RR+RI+ ++ L++L+P KMD
Sbjct: 122 FHIAALQPVEIDPEAVRPPKRRNVRISKDPQSVAARLRRERISERIRILQRLVPGGTKMD 181
Query: 115 KAALLGSAIEHVKDLKLKAMEVSK 138
A++L AI +VK LK + + +
Sbjct: 182 TASMLDEAIHYVKFLKSQVQSLER 205
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 112 (44.5 bits), Expect = 0.00090, P = 0.00090
Identities = 45/163 (27%), Positives = 79/163 (48%)
Query: 71 QEVAEDRATAVSKS-HSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDL 129
+E A AT S+ H +E++RR+++N TLR L+P K DK +L +A +++K L
Sbjct: 252 EEAAAASATNSSQLYHMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSL 311
Query: 130 KLKAMEVSKTLT-IPTEVDEVTVECELFQAAEARAETEAGSSINKV---KGDTLIKASV- 184
+ + E+ T T + + + A RA+ A I+K + L+ +V
Sbjct: 312 ETEITELEGTNTKLEKHIAGGGGAADAAMRAR-RAQQRAKVQISKAADSQSQQLVSLTVM 370
Query: 185 ---SCDD-QPELY-KEIIRVLKGLGLTTVRADISSVGGRIKSI 222
CD + L+ E +R +K + + +V AD S +K+I
Sbjct: 371 VMVECDVVELVLHILECLRWMKEISVLSVYADTYSPQLLLKAI 413
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 107 (42.7 bits), Expect = 0.00091, P = 0.00091
Identities = 24/75 (32%), Positives = 45/75 (60%)
Query: 65 NINPMTQEVAEDRATAVSKS-HSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAI 123
+I+P + + + + +SK S A + RR+RI+ ++ L++L+P KMD A++L AI
Sbjct: 109 HIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI 168
Query: 124 EHVKDLKLKAMEVSK 138
+VK LK + + +
Sbjct: 169 HYVKFLKKQVQSLEE 183
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 113 (44.8 bits), Expect = 0.00092, P = 0.00091
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 87 QAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSKTL 140
+AE++RR ++N L LR L+P KMD+A++LG AI+++ L+ + E+ L
Sbjct: 288 EAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDEL 341
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 109 (43.4 bits), Expect = 0.00095, P = 0.00095
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 68 PMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVK 127
P + R + HS AE+ RR+RI ++ L++L+P + K D+AA+L +++VK
Sbjct: 127 PAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVK 186
Query: 128 DLKLKAMEVS 137
L+L+ +S
Sbjct: 187 FLRLQVKVLS 196
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.128 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 279 252 0.00082 114 3 11 22 0.46 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 90
No. of states in DFA: 605 (64 KB)
Total size of DFA: 196 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.09u 0.24s 24.33t Elapsed: 00:00:01
Total cpu time: 24.10u 0.24s 24.34t Elapsed: 00:00:01
Start: Mon May 20 23:21:43 2013 End: Mon May 20 23:21:44 2013